Citrus Sinensis ID: 046297

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
Protein Sequence
MATLTRVTFISASSPSGSIGHSRNKCRQVASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRTRYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTRF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccEEEEEccccHHHHHHHHHHHHccccccEEEEEccHHHHHHccccccEEEEEccccccHHHHHccccEEEEEEcccccccccccccccccccccccccccccEEcHHHHHHHHHHHHHccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHcccccccccEEEEccccccccccHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccEEEccccccccccccEEEEEEcccHHHHHHHHHHHHcccccEEEEEEccHHHHHHcccccEEEEEccccHccHHHHHccccEEEEEcccccccccccccccccccccEccccccccHccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHcHHHHccEEEEEcccccccccHHcHHHHHHcccccc
Coil and Loop (DISEMBL)
MATLTRVTFisasspsgsighsrnkcrqvassipflnslpefsshafharsspssltslprtryrrscvSKTEAVKVLSMAKSTVlvtgaggrtgQIVYKKLKERSEQYAARGLvrteeskqkiggaddlfigdirdsnsiipaIQGIDALIILTsavpkmkpdfdpakggrpefyfeegaypeqvdwIGQKNQIDAAKAAGAKQIVLVGsmggtnlnhplnslgngnILVWKRKAEQYladsgipytiiragglqdkeggirellvgkddelLQTETRTIARADVAEVCIQALQFEEAKFkafdlaskpegtgtptkdFKALFSQITTRF
Flexible Loop (DISEMBL)
matltrvtfisasspsgsighsrnKCRQVASSIPFLNSLPEFSSHAfharsspssltslprtryRRSCVSKTEAVKVLSMAkstvlvtgaggrtgqIVYKKLKERSEQYAArglvrteeskqkiggaddlfiGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRagglqdkeGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLAskpegtgtptkdfkALFSQITTRF
Low Complexity Region (SEG)
MATLTRVTFisasspsgsighsRNKCRQVASSIPFLNSLPEFSSHAFHArsspssltslprtrYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTRF
Disordered region (IsUnstruct)
*******************************************************************CVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLK*****Y****L*********IGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK************PEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDL*************************
Disordered Region (DISOPRED)
*************************************************************************************LVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK*K*GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR*
Disordered Region (DISEMBL)
MATLTRVTF*****************RQVASSIPFLNSLPEFSSH***********************VSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTRF
Disordered Region (DISPRO)
**********************************FLNSLPEFSSHAFH*******************************MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQIT***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATLTRVTFISASSPSGSIGHSRNKCRQVASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRTRYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTRF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	331	2.2.26 [Sep-21-2011]
O80934	325	Uncharacterized protein A	yes	no	0.909	0.926	0.751	1e-131
Q94EG6	253	Uncharacterized protein A	no	no	0.749	0.980	0.814	1e-117
Q8H124	280	Uncharacterized protein A	no	no	0.658	0.778	0.303	1e-14
Q8H0U5	641	Protein TIC 62, chloropla	no	no	0.580	0.299	0.270	9e-11
P49534	319	Uncharacterized protein y	N/A	no	0.577	0.598	0.304	1e-10
Q8SKU2	534	Protein TIC 62, chloropla	N/A	no	0.247	0.153	0.397	2e-10
P48279	321	Uncharacterized protein y	N/A	no	0.586	0.604	0.293	3e-08
Q9S9N9	344	Cinnamoyl-CoA reductase 1	no	no	0.374	0.360	0.289	0.0006
O07609	214	Uncharacterized sugar epi	yes	no	0.586	0.906	0.292	0.0006
P51238	319	Uncharacterized protein y	N/A	no	0.432	0.448	0.291	0.0008

>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2

 Score =  467 bits (1201), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/310 (75%), Positives = 262/310 (84%), Gaps = 9/310 (2%)

Query: 25  KCRQVASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRT---RYRRSCVSKTEAVKVLSMA 81
           K   VASS     S+P  SS  F +  S S+    P     + RR  V+ + A     + 
Sbjct: 22  KSGAVASS---FVSVPRSSSLQFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPL- 77

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSI 141
             TVLVTGAGGRTGQIVYKKLKERSEQ+ ARGLVRT+ESK+KI G D++FIGDIRD+ SI
Sbjct: 78  --TVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKINGEDEVFIGDIRDTASI 135

Query: 142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA 201
            PA++GIDAL+ILTSAVP+MKP FDP+KGGRPEF+F++GAYPEQVDWIGQKNQIDAAKAA
Sbjct: 136 APAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAA 195

Query: 202 GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG 261
           G KQIVLVGSMGGTN+NHPLNS+GN NILVWKRKAEQYLADSGIPYTIIRAGGLQDK+GG
Sbjct: 196 GVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGG 255

Query: 262 IRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFK 321
           IRELLVGKDDELL+TETRTIARADVAEVC+QALQ EEAKFKA DLASKPEGTGTPTKDFK
Sbjct: 256 IRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFK 315

Query: 322 ALFSQITTRF 331
           ALF+Q+TT+F
Sbjct: 316 ALFTQVTTKF 325

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1

 Score =  422 bits (1084), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 222/248 (89%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
           TVLVTGA GRTGQIVYKKLKE S+++ A+GLVR+ + K+KIGG  D+FIGDI D++SI P
Sbjct: 6   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 65

Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
           A QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAAK AG 
Sbjct: 66  AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125

Query: 204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
           K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DKEGG+R
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR 185

Query: 264 ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKAL 323
           ELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTKDFKAL
Sbjct: 186 ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKAL 245

Query: 324 FSQITTRF 331
           FSQ+T+RF
Sbjct: 246 FSQVTSRF 253

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 36/254 (14%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD----LFIGDIRDSNS 140
           V V GA G+TG+ + ++L  R   +A +  VR  E K K    DD    +   D+ +   
Sbjct: 49  VFVAGATGQTGKRIVEQLLSRG--FAVKAGVRDVE-KAKTSFKDDPSLQIVRADVTEGPD 105

Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
            +  + G D+  ++             A G RP F   +   P +VD  G  N +DA + 
Sbjct: 106 KLAEVIGDDSQAVIC------------ATGFRPGF---DIFTPWKVDNFGTVNLVDACRK 150

Query: 201 AGAKQIVLVGSM--GGTNLNHPLNS---LGN--GNILVWKRKAEQYLADSGIPYTIIRAG 253
            G ++ VLV S+   G  +   LN      N  G  LV K +AE+Y+  SGI YTI+R G
Sbjct: 151 QGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPG 210

Query: 254 GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGT 313
           GL++ +     +++  +D L +    +I+R  VAEV ++AL  EE+ FK  ++ ++ E  
Sbjct: 211 GLKN-DPPTGNVVMEPEDTLYEG---SISRDLVAEVAVEALLQEESSFKVVEIVARAEA- 265

Query: 314 GTPTKDFKALFSQI 327
             P + +K LF+ +
Sbjct: 266 --PKRSYKDLFASV 277

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1

 Score = 68.2 bits (165), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 95/229 (41%), Gaps = 37/229 (16%)

Query: 67  SCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKE---------RSEQYAAR----- 112
           S V++     + S  +  V V GA G+ G    ++L +         RS Q A       
Sbjct: 66  SVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSV 125

Query: 113 ---GLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAK 169
               L  T+E  Q +   + +   D+   +SI PA+     +I    A  K   D     
Sbjct: 126 KEMKLQNTDEGTQPVEKLE-IVECDLEKKDSIQPALGNASVIICCIGASEKEISDIT--- 181

Query: 170 GGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLG-NGN 228
                     G Y  ++D++  KN +DAA +A     +LV S+G      P   L     
Sbjct: 182 ----------GPY--RIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWG 229

Query: 229 ILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRE---LLVGKDDELL 274
           +L WKRKAE+ L +SG+ Y I+R GG++      +E   L +  DD L 
Sbjct: 230 VLCWKRKAEEALIESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLF 278

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Arabidopsis thaliana (taxid: 3702)

>sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 105/233 (45%), Gaps = 42/233 (18%)

Query: 84  TVLVTGAGGRTG-QIVYKKLKERSEQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNS 140
           ++L+ G  G  G Q+V + L   ++ Y  R LVR   + +  K  GA+ L  GD+    +
Sbjct: 2   SLLIIGGTGTLGRQVVLQAL---TKGYQVRCLVRNFRKANFLKEWGAE-LIYGDLSRPET 57

Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
           I P +QGI A+I  +++ P    D D  K               QVDW G+   I+AA+A
Sbjct: 58  IPPCLQGITAVIDTSTSRPS---DLDTLK---------------QVDWDGKCALIEAAQA 99

Query: 201 AGAKQIVLVGSMGGTN-LNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKE 259
           A  K  V   S      LN PL  +  G         E  L  S IPYT+ R  G    +
Sbjct: 100 ANVKHFVFCSSQNVEQFLNIPLMEMKFG--------IETKLQQSNIPYTVFRLAGF--YQ 149

Query: 260 GGIRE--LLVGKDDELLQTETRTIAR----ADVAEVCIQALQFEEAKFKAFDL 306
           G I +  + V ++  +L T   T        D+A+ C+++LQ  E K + F L
Sbjct: 150 GLIEQYAIPVLENLPILVTNENTCVSYMDTQDIAKFCLRSLQLPETKNRTFVL 202

Odontella sinensis (taxid: 2839)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 183 PEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLG-NGNILVWKRKAEQYLA 241
           P ++D+   KN +DAA  A     +LV S+G      P   L     +L+WKRKAE+ L 
Sbjct: 190 PCRIDYRATKNLVDAATVAKVNHFILVTSLGTNKFGLPAAILNLFWGVLIWKRKAEEALL 249

Query: 242 DSGIPYTIIRAGGLQDKEGGIRE 264
            SGIPYTI+R GG++      +E
Sbjct: 250 ASGIPYTIVRPGGMERPTDAYKE 272

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1

 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 38/232 (16%)

Query: 84  TVLVTGAGGRTG-QIVYKKLKERSEQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNS 140
           ++LV GA G  G QIV   L    E Y  R LVR   + +  K  GA  L  GD+    S
Sbjct: 2   SILVIGATGTLGRQIVRSAL---DEGYQVRCLVRNLRKAAFLKEWGAK-LIWGDLSQPES 57

Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
           ++PA+ GI  +I  +++ P      DPA           G Y  QVD  G+K  IDAAKA
Sbjct: 58  LLPALTGIRVIIDTSTSRPT-----DPA-----------GVY--QVDLKGKKALIDAAKA 99

Query: 201 AGAKQIVLVGSMGGTNLNH-PLNSLGNGNILVWKRKAEQYLADSGIPYTIIR-AGGLQDK 258
              ++ +    +     +  PL  +        K   E+ L +SG+ YTI +  G  Q  
Sbjct: 100 MKIEKFIFFSILNSEKYSQVPLMRI--------KTVTEELLKESGLNYTIFKLCGFFQGL 151

Query: 259 EGGIRELLVGKDDELLQTETRTIARA---DVAEVCIQALQFEEAKFKAFDLA 307
            G     ++ +    + TE+ +IA     D+A   +++L  +E   + F L 
Sbjct: 152 IGQYAVPILDQQTVWITTESTSIAYMDTIDIARFTLRSLVLKETNNRVFPLV 203

Cyanophora paradoxa (taxid: 2762)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 28/152 (18%)

Query: 75  VKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGAD 128
           V V S A  TV VTGAGG     + K L ER   Y  +G VR  +  +        GG +
Sbjct: 3   VDVASPAGKTVCVTGAGGYIASWIVKILLERG--YTVKGTVRNPDDPKNTHLRELEGGKE 60

Query: 129 DLFI--GDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQV 186
            L +   D++D  ++  AI G D +    S V       DP +   P             
Sbjct: 61  RLILCKADLQDYEALKAAIDGCDGVFHTASPVTD-----DPEQMVEPAVN---------- 105

Query: 187 DWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN 218
              G K  I+AA  A  K++V+  S+G   ++
Sbjct: 106 ---GAKFVINAAAEAKVKRVVITSSIGAVYMD 134

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|O07609|YHFK_BACSU Uncharacterized sugar epimerase YhfK OS=Bacillus subtilis (strain 168) GN=yhfK PE=2 SV=1

 Score = 45.4 bits (106), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 32/226 (14%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--GGADDLFIGDIRDSNSII 142
           V + GA G+ GQ +    ++  + ++ R +VR EE K  +   GA+ +          I 
Sbjct: 3   VFLIGANGQIGQRLVSLFQDNPD-HSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIA 61

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQ--VDWIGQKNQIDAAKA 200
            A +G DA+I            F    GG          Y +   VD  G    I+AA  
Sbjct: 62  AAAKGCDAII------------FTAGSGGST-------GYDKTLLVDLDGAAKAIEAAAI 102

Query: 201 AGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEG 260
           AG K+ ++V ++   N  +   +L      V K  A++ L  SG+ YTIIR GGL++ E 
Sbjct: 103 AGIKRFIMVSALQAHNRENWNEALKP--YYVAKHYADKILEASGLTYTIIRPGGLRN-EP 159

Query: 261 GIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDL 306
           G   +   KD      E   I+R DVA+  I +L  +  + +AFDL
Sbjct: 160 GTGTVSAAKD-----LERGFISRDDVAKTVIASLDEKNTENRAFDL 200

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 4

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1

 Score = 45.1 bits (105), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 32/175 (18%)

Query: 84  TVLVTGAGGRTG-QIVYKKLKERSEQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNS 140
           T+LV GA G  G QIV + L    E Y  + +VR   + +  K  GA+ L  GD++   S
Sbjct: 2   TLLVIGATGTLGRQIVRRAL---DEGYNVKCMVRNLRKSAFLKEWGAE-LVYGDLKLPES 57

Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
           I+ +  G+ A+I  +++ P      DP                EQ+D  G+   I+AAKA
Sbjct: 58  ILQSFCGVTAVIDASTSRPS-----DPYN-------------TEQIDLDGKIALIEAAKA 99

Query: 201 AGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGL 255
           A  ++ +    +      +P   L N      K +   YL  S I YT+   GG 
Sbjct: 100 AKVQRFIFFSILNAD--QYPKVPLMN-----LKSQVVNYLQKSSISYTVFSLGGF 147

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
449448620	326	PREDICTED: uncharacterized protein At2g3	0.972	0.987	0.761	1e-139
255580317	323	conserved hypothetical protein [Ricinus	0.966	0.990	0.760	1e-134
388505220	313	unknown [Lotus japonicus]	0.939	0.993	0.729	1e-132
388522953	329	unknown [Medicago truncatula]	0.978	0.984	0.726	1e-132
224090705	251	predicted protein [Populus trichocarpa]	0.758	1.0	0.888	1e-129
18404496	325	NAD(P)-binding Rossmann-fold-containing	0.909	0.926	0.751	1e-129
359806452	331	uncharacterized protein LOC100794855 [Gl	0.794	0.794	0.840	1e-127
388491410	250	unknown [Lotus japonicus]	0.755	1.0	0.873	1e-126
392056685	253	putative NAD-dependent dehydrogenase 2 [	0.749	0.980	0.866	1e-126
449520219	236	PREDICTED: uncharacterized protein At2g3	0.712	1.0	0.927	1e-126

>gi|449448620|ref|XP_004142064.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Cucumis sativus]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/335 (76%), Positives = 274/335 (81%), Gaps = 13/335 (3%)

Query: 1   MATLTRVTFISASSPSGSIG----HSRNKCRQVASSIPFLNSLPEFSSHAFHARSSPSSL 56
           MA LTRV    ++S S S      H  +KC  V +S    N +P  S         PSS+
Sbjct: 1   MAMLTRVPLFYSASKSTSSPPLPFHQCHKCSFVTNS----NLIPSSSLQIL-----PSSI 51

Query: 57  TSLPRTRYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR 116
           ++     +RR        V +   A  TVLVTGAGGRTGQIVYKKLKERS+ YAARGLVR
Sbjct: 52  STTSHKGFRRRRFPALSVVAMADSAPPTVLVTGAGGRTGQIVYKKLKERSDHYAARGLVR 111

Query: 117 TEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFY 176
           TEESKQ IGGADDLF+GDIRD++S+ PAIQGIDALIILTSAVPKMKP FDP KGGRPEFY
Sbjct: 112 TEESKQSIGGADDLFVGDIRDADSLGPAIQGIDALIILTSAVPKMKPGFDPTKGGRPEFY 171

Query: 177 FEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKA 236
           FE+GAYPEQVDWIGQKNQIDAAKAAG KQIVLVGSMGGTN+NHPLNSLGNGNILVWKRKA
Sbjct: 172 FEDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSLGNGNILVWKRKA 231

Query: 237 EQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQF 296
           EQYLADSGIPYTIIRAGGLQDK+GGIRELLVGKDDELLQTETRTIARADVAEVCIQALQF
Sbjct: 232 EQYLADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQF 291

Query: 297 EEAKFKAFDLASKPEGTGTPTKDFKALFSQITTRF 331
           EEAKFKA DLASKPEG GTPTKDFKALFSQ+TTRF
Sbjct: 292 EEAKFKALDLASKPEGVGTPTKDFKALFSQVTTRF 326

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580317|ref|XP_002530987.1| conserved hypothetical protein [Ricinus communis] gi|223529439|gb|EEF31399.1| conserved hypothetical protein [Ricinus communis]

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/334 (76%), Positives = 271/334 (81%), Gaps = 14/334 (4%)

Query: 1   MATLTRVTFISASSPSGSIGHSRNKCRQVASSIPFLNSLPEFSSHAFH-ARSSPSSLTSL 59
           MAT TRV           I    NK   VA S P L  LP  +  +F    SS  S  SL
Sbjct: 1   MATATRV----------PIRFPNNKYACVAPSSP-LFYLPCTAFTSFPLPESSALSFPSL 49

Query: 60  PRTRYRRSCVSKTEAVK--VLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT 117
            +T   ++   K  AV   +     STVLVTGAGGRTG IVYKKLKERS QY ARGLVRT
Sbjct: 50  SKTHNCKAGFRKLVAVSASMTDSTSSTVLVTGAGGRTGSIVYKKLKERSGQYVARGLVRT 109

Query: 118 EESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYF 177
           +ESK KI GA+D+FIGDIR++ SI+PAIQGIDALIILTSAVPKMKP FDP KGGRPEFYF
Sbjct: 110 QESKDKISGAEDVFIGDIRETESIVPAIQGIDALIILTSAVPKMKPGFDPTKGGRPEFYF 169

Query: 178 EEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAE 237
           E+GAYPEQVDW GQKNQIDAAKAAG KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAE
Sbjct: 170 EDGAYPEQVDWTGQKNQIDAAKAAGVKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAE 229

Query: 238 QYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE 297
           QYLADSGIPYTIIRAGGLQDKEGG+RELL+GKDDELLQTETRTIARADVAEVCIQALQFE
Sbjct: 230 QYLADSGIPYTIIRAGGLQDKEGGVRELLIGKDDELLQTETRTIARADVAEVCIQALQFE 289

Query: 298 EAKFKAFDLASKPEGTGTPTKDFKALFSQITTRF 331
           EAKFKAFDLASKPEGTG+PTKDFKALFSQ+TTRF
Sbjct: 290 EAKFKAFDLASKPEGTGSPTKDFKALFSQVTTRF 323

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505220|gb|AFK40676.1| unknown [Lotus japonicus]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/333 (72%), Positives = 274/333 (82%), Gaps = 22/333 (6%)

Query: 1   MATLTRVTFISASSPSGSIGHSRNKCRQ--VASSIPFLNSLPEFSSHAFHARSSPSSLTS 58
           M   TRV F+SA+        S N+C +  + SS+  L SL +FS       SS  SL +
Sbjct: 1   MGMATRVPFVSAT-------LSPNQCHKYCLPSSLKLLTSL-QFS------HSSSLSLAT 46

Query: 59  LPRTRYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE 118
             R R R S V+  ++      ++STVLVTGAGGRTG+IVYKKL+ERS QY ARGLVRTE
Sbjct: 47  HKRVRTRTSVVAMADS------SRSTVLVTGAGGRTGKIVYKKLQERSSQYIARGLVRTE 100

Query: 119 ESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFE 178
           ESKQ IG +DD+++GDIRD+ SI PAIQGIDALIILTSAVP MKP F+P KG RPEFYFE
Sbjct: 101 ESKQTIGASDDVYVGDIRDTGSIAPAIQGIDALIILTSAVPLMKPGFNPTKGERPEFYFE 160

Query: 179 EGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQ 238
           +GAYPEQVDWIGQKNQIDAAKAAG KQIVLVGSMGGT+LN+PLNSLGNGNILVWKRKAEQ
Sbjct: 161 DGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTDLNNPLNSLGNGNILVWKRKAEQ 220

Query: 239 YLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE 298
           YLADSGIPYTIIRAGGLQDKEGG+REL++GKDDE+L+TETRTIAR DVAEVCIQAL FEE
Sbjct: 221 YLADSGIPYTIIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQALNFEE 280

Query: 299 AKFKAFDLASKPEGTGTPTKDFKALFSQITTRF 331
           A+FKAFDLASKPEG GTPT+DFKALFSQITTRF
Sbjct: 281 AQFKAFDLASKPEGAGTPTRDFKALFSQITTRF 313

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522953|gb|AFK49538.1| unknown [Medicago truncatula]

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/333 (72%), Positives = 271/333 (81%), Gaps = 9/333 (2%)

Query: 1   MATLTRVTFISASSPSGSIGHSRNKCRQVASSIPFLNSLPEFSSHAFHARSSPSSLTSL- 59
           MAT TRV F+SA++         N+C + +     +N LP  S+    +    +SL SL 
Sbjct: 4   MATTTRVPFVSATT------FFPNQCHKYSLVARTIN-LPVSSTSLRLSSCYSTSLVSLA 56

Query: 60  -PRTRYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE 118
            PR+  R         V +   +KSTVLVTGAGGRTGQIVYKKLKER  +Y ARGLVR+E
Sbjct: 57  LPRSFKRGGNRRSVVVVAMAESSKSTVLVTGAGGRTGQIVYKKLKERPNEYIARGLVRSE 116

Query: 119 ESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFE 178
           ESKQKIG ADD+FIGDIRD+ S+ PAIQGIDALIILTS VP MKP FDP +G RPEFYFE
Sbjct: 117 ESKQKIGAADDVFIGDIRDTESLAPAIQGIDALIILTSGVPLMKPGFDPTQGKRPEFYFE 176

Query: 179 EGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQ 238
           +GAYPEQVDWIGQKNQIDAAKAAG KQIVLVGSMGGT+LNHPLNSLG+GNILVWKRKAEQ
Sbjct: 177 DGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTDLNHPLNSLGDGNILVWKRKAEQ 236

Query: 239 YLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE 298
           YLADSGIPYTIIRAGGLQDKEGGIREL++GKDDELL+T+ RTIAR DVAEVC+QAL FEE
Sbjct: 237 YLADSGIPYTIIRAGGLQDKEGGIRELVIGKDDELLKTDIRTIARPDVAEVCLQALNFEE 296

Query: 299 AKFKAFDLASKPEGTGTPTKDFKALFSQITTRF 331
           A+FKAFDLASKPEGTG+PTKDFKALFSQITTRF
Sbjct: 297 AQFKAFDLASKPEGTGSPTKDFKALFSQITTRF 329

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090705|ref|XP_002309064.1| predicted protein [Populus trichocarpa] gi|222855040|gb|EEE92587.1| predicted protein [Populus trichocarpa]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/252 (88%), Positives = 240/252 (95%), Gaps = 1/252 (0%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSN 139
           MA S VLVTGAGGRTG IVYKKLKERSEQY ARGLVRTEESK+KIGGA+D+F+GDIR+S 
Sbjct: 1   MAPSIVLVTGAGGRTGSIVYKKLKERSEQYVARGLVRTEESKEKIGGAEDVFVGDIRESK 60

Query: 140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK 199
           SI+PAIQGID+LIILTSAVPKMKP  DP+KG RPEFYFE+GA+PEQVDWIGQKNQIDAAK
Sbjct: 61  SIVPAIQGIDSLIILTSAVPKMKPGSDPSKG-RPEFYFEDGAFPEQVDWIGQKNQIDAAK 119

Query: 200 AAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKE 259
           AAG KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSG+PYTI+RAGGLQDKE
Sbjct: 120 AAGVKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGVPYTILRAGGLQDKE 179

Query: 260 GGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKD 319
           GG+RELLVGKDDELLQTETRTIARADVAEVCIQALQ+EEA+FKAFDLASKPEGTGTP  D
Sbjct: 180 GGVRELLVGKDDELLQTETRTIARADVAEVCIQALQYEEAQFKAFDLASKPEGTGTPAND 239

Query: 320 FKALFSQITTRF 331
           FKALFSQ+T RF
Sbjct: 240 FKALFSQVTARF 251

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404496|ref|NP_565868.1| NAD(P)-binding Rossmann-fold-containing protein [Arabidopsis thaliana] gi|22096383|sp|O80934.2|Y2766_ARATH RecName: Full=Uncharacterized protein At2g37660, chloroplastic; Flags: Precursor gi|14596079|gb|AAK68767.1| Unknown protein [Arabidopsis thaliana] gi|20148255|gb|AAM10018.1| unknown protein [Arabidopsis thaliana] gi|20197253|gb|AAC23636.2| expressed protein [Arabidopsis thaliana] gi|21537410|gb|AAM61751.1| putative 3-beta hydroxysteroid dehydrogenase/isomerase protein [Arabidopsis thaliana] gi|330254337|gb|AEC09431.1| NAD(P)-binding Rossmann-fold-containing protein [Arabidopsis thaliana]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/310 (75%), Positives = 262/310 (84%), Gaps = 9/310 (2%)

Query: 25  KCRQVASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRT---RYRRSCVSKTEAVKVLSMA 81
           K   VASS     S+P  SS  F +  S S+    P     + RR  V+ + A     + 
Sbjct: 22  KSGAVASS---FVSVPRSSSLQFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPL- 77

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSI 141
             TVLVTGAGGRTGQIVYKKLKERSEQ+ ARGLVRT+ESK+KI G D++FIGDIRD+ SI
Sbjct: 78  --TVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKINGEDEVFIGDIRDTASI 135

Query: 142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA 201
            PA++GIDAL+ILTSAVP+MKP FDP+KGGRPEF+F++GAYPEQVDWIGQKNQIDAAKAA
Sbjct: 136 APAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAA 195

Query: 202 GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG 261
           G KQIVLVGSMGGTN+NHPLNS+GN NILVWKRKAEQYLADSGIPYTIIRAGGLQDK+GG
Sbjct: 196 GVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGG 255

Query: 262 IRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFK 321
           IRELLVGKDDELL+TETRTIARADVAEVC+QALQ EEAKFKA DLASKPEGTGTPTKDFK
Sbjct: 256 IRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFK 315

Query: 322 ALFSQITTRF 331
           ALF+Q+TT+F
Sbjct: 316 ALFTQVTTKF 325

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806452|ref|NP_001241503.1| uncharacterized protein LOC100794855 [Glycine max] gi|255642211|gb|ACU21370.1| unknown [Glycine max]

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/263 (84%), Positives = 240/263 (91%)

Query: 69  VSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD 128
           V +   V  ++ +KSTVLVTGAGGRTGQIVYKKL+ER  QY ARGLVRT+ESKQ IG AD
Sbjct: 69  VGRRFGVVAMAESKSTVLVTGAGGRTGQIVYKKLRERPNQYVARGLVRTDESKQNIGAAD 128

Query: 129 DLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
           D+ +GDIRD+ SI+PAIQGIDALIILTSAVP++KP FDP KG RPEFYFE+GAYPEQVDW
Sbjct: 129 DVIVGDIRDAESIVPAIQGIDALIILTSAVPQIKPGFDPTKGQRPEFYFEDGAYPEQVDW 188

Query: 189 IGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYT 248
           IGQKNQID AKAAG K IVLVGSMGGT+LNHPLNSLGNGNILVWKRKAEQYLADSGIPYT
Sbjct: 189 IGQKNQIDVAKAAGVKHIVLVGSMGGTDLNHPLNSLGNGNILVWKRKAEQYLADSGIPYT 248

Query: 249 IIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLAS 308
           IIRAGGLQDK+GG+RELLVGKDDELLQTETRTI+R+DVAEVCIQAL FEEAKFKAFDLAS
Sbjct: 249 IIRAGGLQDKDGGLRELLVGKDDELLQTETRTISRSDVAEVCIQALNFEEAKFKAFDLAS 308

Query: 309 KPEGTGTPTKDFKALFSQITTRF 331
           KPEG G+ TKDFKALFSQITTRF
Sbjct: 309 KPEGAGSATKDFKALFSQITTRF 331

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491410|gb|AFK33771.1| unknown [Lotus japonicus]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/252 (87%), Positives = 236/252 (93%), Gaps = 2/252 (0%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSN 139
           MA STVLVTGAGGRTGQIVYK LKER  QY ARGLVRTEESKQKIGGADD+FIGDIRD+ 
Sbjct: 1   MAPSTVLVTGAGGRTGQIVYKTLKER--QYVARGLVRTEESKQKIGGADDVFIGDIRDAG 58

Query: 140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK 199
           SI+PAIQGIDALIILTSA PKMKP FDP KGGRPEFYF++GAYPEQVDWIGQKNQIDAAK
Sbjct: 59  SIVPAIQGIDALIILTSATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDAAK 118

Query: 200 AAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKE 259
           AAG K++VLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIR GGL DK+
Sbjct: 119 AAGVKRVVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRPGGLLDKD 178

Query: 260 GGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKD 319
           GG+REL++GKDDELLQTET+TI RADVAEVC+QAL +EE +FKAFDLASKPEG GTPTKD
Sbjct: 179 GGLRELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLASKPEGVGTPTKD 238

Query: 320 FKALFSQITTRF 331
           FKALFSQIT+RF
Sbjct: 239 FKALFSQITSRF 250

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|392056685|gb|AFM52663.1| putative NAD-dependent dehydrogenase 2 [Erythroxylum coca]

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 215/248 (86%), Positives = 236/248 (95%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
           TVLVTGAGGRTG IVYKKLKERS+QY ARGLVRT+ESK+KIGGA+D+F+GDIRD+ SIIP
Sbjct: 6   TVLVTGAGGRTGSIVYKKLKERSDQYVARGLVRTQESKEKIGGAEDVFVGDIRDAESIIP 65

Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
           A+QGID LIILTSAVPKMKP FDP++GGRPEFY+E+GA+PEQVDW+GQKNQIDAA A+G 
Sbjct: 66  AVQGIDTLIILTSAVPKMKPGFDPSQGGRPEFYYEDGAFPEQVDWVGQKNQIDAATASGV 125

Query: 204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
           KQIVLVGSMGGTN NHPLN LGNGNIL+WKRKAEQYLADSG+PYTIIRAGGL DK+GGIR
Sbjct: 126 KQIVLVGSMGGTNPNHPLNRLGNGNILIWKRKAEQYLADSGVPYTIIRAGGLLDKDGGIR 185

Query: 264 ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKAL 323
           ELLVGKDDELLQT+T+TI RADVAEVCIQALQ+EEAKFKAFDLASKPEGTGTPTKDFKAL
Sbjct: 186 ELLVGKDDELLQTDTKTIPRADVAEVCIQALQYEEAKFKAFDLASKPEGTGTPTKDFKAL 245

Query: 324 FSQITTRF 331
           FSQIT RF
Sbjct: 246 FSQITARF 253

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520219|ref|XP_004167131.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like, partial [Cucumis sativus]

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/236 (92%), Positives = 228/236 (96%)

Query: 96  QIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILT 155
           QIVYKKLKERS+ YAARGLVRTEESKQ IGGADDLF+GDIRD++S+ PAIQGIDALIILT
Sbjct: 1   QIVYKKLKERSDHYAARGLVRTEESKQSIGGADDLFVGDIRDADSLGPAIQGIDALIILT 60

Query: 156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGT 215
           SAVPKMKP FDP KGGRPEFYFE+GAYPEQVDWIGQKNQIDAAKAAG KQIVLVGSMGGT
Sbjct: 61  SAVPKMKPGFDPTKGGRPEFYFEDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGT 120

Query: 216 NLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQ 275
           N+NHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDK+GGIRELLVGKDDELLQ
Sbjct: 121 NINHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLQ 180

Query: 276 TETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTRF 331
           TETRTIARADVAEVCIQALQFEEAKFKA DLASKPEG GTPTKDFKALFSQ+TTRF
Sbjct: 181 TETRTIARADVAEVCIQALQFEEAKFKALDLASKPEGVGTPTKDFKALFSQVTTRF 236

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
TAIR|locus:2040716	325	AT2G37660 [Arabidopsis thalian	0.749	0.763	0.870	3.4e-116
TAIR|locus:2185228	253	AT5G02240 [Arabidopsis thalian	0.749	0.980	0.814	1.2e-106
TAIR|locus:2040854	280	AT2G34460 [Arabidopsis thalian	0.709	0.839	0.314	8.6e-17
UNIPROTKB|Q71X34	209	LMOf2365_2365 "Putative unchar	0.371	0.588	0.325	2.8e-11
TAIR|locus:2015651	598	HCF173 "high chlorophyll fluor	0.308	0.170	0.345	3.4e-11
TAIR|locus:2087901	641	Tic62 "translocon at the inner	0.722	0.372	0.257	2.9e-10
SGD|S000004696	227	YMR090W "Putative protein of u	0.619	0.903	0.252	1.3e-05

TAIR|locus:2040716 AT2G37660 [Arabidopsis thaliana (taxid:3702)]

 Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
 Identities = 216/248 (87%), Positives = 238/248 (95%)

Query:    84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
             TVLVTGAGGRTGQIVYKKLKERSEQ+ ARGLVRT+ESK+KI G D++FIGDIRD+ SI P
Sbjct:    78 TVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKINGEDEVFIGDIRDTASIAP 137

Query:   144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
             A++GIDAL+ILTSAVP+MKP FDP+KGGRPEF+F++GAYPEQVDWIGQKNQIDAAKAAG 
Sbjct:   138 AVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGV 197

Query:   204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
             KQIVLVGSMGGTN+NHPLNS+GN NILVWKRKAEQYLADSGIPYTIIRAGGLQDK+GGIR
Sbjct:   198 KQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIR 257

Query:   264 ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKAL 323
             ELLVGKDDELL+TETRTIARADVAEVC+QALQ EEAKFKA DLASKPEGTGTPTKDFKAL
Sbjct:   258 ELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFKAL 317

Query:   324 FSQITTRF 331
             F+Q+TT+F
Sbjct:   318 FTQVTTKF 325

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
 Identities = 202/248 (81%), Positives = 222/248 (89%)

Query:    84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
             TVLVTGA GRTGQIVYKKLKE S+++ A+GLVR+ + K+KIGG  D+FIGDI D++SI P
Sbjct:     6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 65

Query:   144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
             A QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAAK AG 
Sbjct:    66 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125

Query:   204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
             K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DKEGG+R
Sbjct:   126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR 185

Query:   264 ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKAL 323
             ELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTKDFKAL
Sbjct:   186 ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKAL 245

Query:   324 FSQITTRF 331
             FSQ+T+RF
Sbjct:   246 FSQVTSRF 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 84/267 (31%), Positives = 128/267 (47%)

Query:    69 VSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD 128
             + K EA   +   K  V V GA G+TG+ + ++L  R   +A +  VR  E K K    D
Sbjct:    35 MEKGEAENAVKTKK--VFVAGATGQTGKRIVEQLLSRG--FAVKAGVRDVE-KAKTSFKD 89

Query:   129 DLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
             D  +  +R         +G D L      +         A G RP F   +   P +VD 
Sbjct:    90 DPSLQIVRAD-----VTEGPDKL---AEVIGDDSQAVICATGFRPGF---DIFTPWKVDN 138

Query:   189 IGQKNQIDAAKAAGAKQIVLVGSM--GGTNLNHPLNSLG---N--GNILVWKRKAEQYLA 241
              G  N +DA +  G ++ VLV S+   G  +   LN      N  G  LV K +AE+Y+ 
Sbjct:   139 FGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIK 198

Query:   242 DSGIPYTIIRAGGLQ-DKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAK 300
              SGI YTI+R GGL+ D   G   +++  +D L +    +I+R  VAEV ++AL  EE+ 
Sbjct:   199 KSGINYTIVRPGGLKNDPPTG--NVVMEPEDTLYEG---SISRDLVAEVAVEALLQEESS 253

Query:   301 FKAFDLASKPEGTGTPTKDFKALFSQI 327
             FK  ++ ++ E    P + +K LF+ +
Sbjct:   254 FKVVEIVARAEA---PKRSYKDLFASV 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

UNIPROTKB|Q71X34 LMOf2365_2365 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 142 (55.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
 Identities = 44/135 (32%), Positives = 66/135 (48%)

Query:   186 VDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGI 245
             +D  G    I+ AK  G ++ ++V S G  N  +   SL +   L  K+ A++ L  SG+
Sbjct:    85 IDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESLIH--YLKAKQAADEELKRSGL 142

Query:   246 PYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFD 305
              YTI+R  GL D          GK  E+ +  T TI RADVA+   +AL  + + +K + 
Sbjct:   143 DYTIVRPVGLSDDPA------TGKIAEVSEKPTTTIPRADVADFISEALSEKSSFYKTYT 196

Query:   306 LASKPEGTGTPTKDF 320
             +    E   TP K F
Sbjct:   197 I----ESGDTPIKHF 207

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2015651 HCF173 "high chlorophyll fluorescence phenotype 173" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
 Identities = 39/113 (34%), Positives = 57/113 (50%)

Query:   195 IDAAKAAGAKQIVLVGSMG-GTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG 253
             I A  A      +LV   G G   N          +L  KR  E  L  SG+ YTIIR G
Sbjct:   458 IKALPAGQETDFILVSCTGSGVEANR------REQVLKAKRAGEDSLRRSGLGYTIIRPG 511

Query:   254 GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDL 306
              L+++ GG R L+  + + + Q     I+ ADVA++C++AL    A+ K+FD+
Sbjct:   512 PLKEEPGGQRALIFDQGNRISQG----ISCADVADICVKALHDSTARNKSFDV 560

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006413 "translational initiation" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 2.9e-10, P = 2.9e-10
 Identities = 68/264 (25%), Positives = 115/264 (43%)

Query:    67 SCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG 126
             S V++     + S  +  V V GA G+ G    ++L +    +  R  VR   S Q+ G 
Sbjct:    66 SVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLG--FRVRAGVR---SAQRAGS 120

Query:   127 ADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKG---------GRPEFYF 177
                  + +++  N+     Q ++ L I+   + K K    PA G         G  E   
Sbjct:   121 LVQS-VKEMKLQNTD-EGTQPVEKLEIVECDLEK-KDSIQPALGNASVIICCIGASEKEI 177

Query:   178 EEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGN-GNILVWKRKA 236
              +   P ++D++  KN +DAA +A     +LV S+G      P   L     +L WKRKA
Sbjct:   178 SDITGPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKA 237

Query:   237 EQYLADSGIPYTIIRAGGLQDKEGGIRE---LLVGKDDELLQTETRTIARADVAEVCIQA 293
             E+ L +SG+ Y I+R GG++      +E   L +  DD L   +   ++   VAE+    
Sbjct:   238 EEALIESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQ---VSNLQVAELLACM 294

Query:   294 LQFEEAKF-KAFDLASKPEGTGTP 316
              +  +  F K  ++ ++     TP
Sbjct:   295 AKNPQLSFSKIVEVVAETTAPLTP 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

SGD|S000004696 YMR090W "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 124 (48.7 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 57/226 (25%), Positives = 100/226 (44%)

Query:    80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ--KIGGADDLFIGDIRD 137
             M+   V V GA G+ G+++  +LK          +VRT++     K     D  + DI  
Sbjct:     1 MSPMKVAVVGASGKVGRLLINQLKANDSFSTPLAIVRTQDQVNYFKNEVGVDASLTDIE- 59

Query:   138 SNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA 197
              N+ +  I   DA+    + V      F    GG+      E  +   +D  G    ++A
Sbjct:    60 -NASVSEIT--DAIKAYDAVV------FSAGAGGKGM----ERIFTVDLD--GCIKVVEA 104

Query:   198 AKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQD 257
              + AG K+ V+V ++   + +   N  G     + KR A++ + +S + YTI++ G L+ 
Sbjct:   105 CEKAGIKRFVVVSALKAEDRDFWYNIKGLREYYIAKRSADREVRNSNLDYTILQPGSLEL 164

Query:   258 KEG-GIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFK 302
              +G G+ + L  K +E       +I R DVA   +++L    A  K
Sbjct:   165 NKGTGLLQPL-DKLEEKASVNY-SINREDVASFIVESLLHPNATVK 208


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      331       304   0.00098  115 3  11 22  0.41    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  186 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.43u 0.10s 23.53t   Elapsed:  00:00:01
  Total cpu time:  23.43u 0.10s 23.53t   Elapsed:  00:00:01
  Start:  Sat May 11 05:43:08 2013   End:  Sat May 11 05:43:09 2013

GO:0003674 "molecular_function" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O80934	Y2766_ARATH	No assigned EC number	0.7516	0.9093	0.9261	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	331
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-60
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-35
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	6e-30
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	1e-19
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	1e-16
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	4e-14
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	3e-13
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	4e-13
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	4e-12
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	4e-12
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	4e-12
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	1e-09
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	7e-09
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-08
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-07
pfam05368	232	pfam05368, NmrA, NmrA-like family	1e-07
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-07
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	1e-06
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	1e-06
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	9e-06
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	2e-05
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	2e-05
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-05
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	3e-05
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	4e-05
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-04
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	4e-04
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	6e-04
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	6e-04
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	0.001
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	0.001
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	0.001
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	0.001
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	0.003

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  192 bits (489), Expect = 2e-60
 Identities = 86/224 (38%), Positives = 115/224 (51%), Gaps = 26/224 (11%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSII 142
            VLV GA G+ G+ V ++L +R   Y  R LVR     +K+     ++ +GD+ D+ S+ 
Sbjct: 1   KVLVVGATGKVGRHVVRELLDR--GYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLA 58

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A++GIDA+I    +  K                   G   E VD+ G  N IDAAK AG
Sbjct: 59  AALEGIDAVISAAGSGGKG------------------GPRTEAVDYDGNINLIDAAKKAG 100

Query: 203 AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGI 262
            K+ VLV S+G    +HPL     G  L  KRKAE YL  SG+ YTI+R GGL D   G 
Sbjct: 101 VKRFVLVSSIGADKPSHPLE--ALGPYLDAKRKAEDYLRASGLDYTIVRPGGLTDDPAGT 158

Query: 263 RELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDL 306
             +++G D   L      I+RADVAEV  +AL    A  K F+L
Sbjct: 159 GRVVLGGDGTRLDGP---ISRADVAEVLAEALDTPAAIGKTFEL 199

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score =  127 bits (320), Expect = 1e-35
 Identities = 52/224 (23%), Positives = 86/224 (38%), Gaps = 50/224 (22%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFI-GDIRDSNSIIP 143
           +L+ GA G  G+ + ++L E+   +    LVR  +   K        + GD+RD +S+  
Sbjct: 1   ILILGATGFIGRALARELLEQG--HEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSD 58

Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
           A+QG+D +I L  A    +                      +VD  G +N ++AAK AG 
Sbjct: 59  AVQGVDVVIHLAGAPRDTR-------------------DFCEVDVEGTRNVLEAAKEAGV 99

Query: 204 KQIVLVGSMGGTNLNHP-LNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGI 262
           K  + + S+G     H       +   L  K K E  L ++ +PYTI+R G +       
Sbjct: 100 KHFIFISSLGAYGDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYG----- 154

Query: 263 RELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDL 306
                                 D+A     A+     K + F+ 
Sbjct: 155 ----------------------DLARAIANAVVTPGKKNETFNA 176

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score =  112 bits (281), Expect = 6e-30
 Identities = 57/214 (26%), Positives = 84/214 (39%), Gaps = 38/214 (17%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           + V GA G+TG+ + K+L  R  Q     L R        G        D+ D   +  A
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQ--VTALSRNPSKAPAPGV--TPVQKDLFDLADLAEA 56

Query: 145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK 204
           + G+DA++    A P                           D  G K+ +DAA  AG +
Sbjct: 57  LAGVDAVVDAFGARPD--------------------------DSDGVKHLLDAAARAGVR 90

Query: 205 QIVLVGSMGGTNLNHPLNSLGN----GNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEG 260
           +IV+V + G          L +          K  AE+ L  SG+ +TI+R G L D+EG
Sbjct: 91  RIVVVSAAGLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGALFDEEG 150

Query: 261 GIRELLVGKDDELLQTETRTIARADVAEVCIQAL 294
              E+    D         +I+RADVA   +  L
Sbjct: 151 ETYEIGTEGDPA----GESSISRADVAAALLDEL 180

Length = 182

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 86.1 bits (213), Expect = 1e-19
 Identities = 78/269 (28%), Positives = 128/269 (47%), Gaps = 41/269 (15%)

Query: 72  TEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLF 131
           +E        K TV V GA GRTG+ + ++L  +     A G+   +++K  +     L 
Sbjct: 8   SEEDAENVKTK-TVFVAGATGRTGKRIVEQLLAKGFAVKA-GVRDVDKAKTSLPQDPSLQ 65

Query: 132 I--GDIRD-SNSIIPAI-QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVD 187
           I   D+ + S+ ++ AI    DA+I  T      +  FDP               P +VD
Sbjct: 66  IVRADVTEGSDKLVEAIGDDSDAVICATG----FRRSFDPFA-------------PWKVD 108

Query: 188 WIGQKNQIDAAKAAGAKQIVLV------GSMGGTNLNHP---LNSLGNGNILVWKRKAEQ 238
             G  N ++A + AG  + +LV      G+  G  LN     LN  G    LV K +AE+
Sbjct: 109 NFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGL--TLVAKLQAEK 166

Query: 239 YLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE 298
           Y+  SGI YTI+R GGL + +     +++  +D L +    +I+R  VAEV ++AL   E
Sbjct: 167 YIRKSGINYTIVRPGGLTN-DPPTGNIVMEPEDTLYEG---SISRDQVAEVAVEALLCPE 222

Query: 299 AKFKAFDLASKPEGTGTPTKDFKALFSQI 327
           + +K  ++ ++ +    P + +K LF+ I
Sbjct: 223 SSYKVVEIVARADA---PKRSYKDLFASI 248

Length = 251

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 78.1 bits (193), Expect = 1e-16
 Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 56/236 (23%)

Query: 86  LVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDSNSIIPA 144
           LVTGA G+ G  V + L  +     A  LVR  E  +       ++  GD  D  ++  A
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVA--LVRNPEKAKAFAADGVEVRQGDYDDPETLERA 59

Query: 145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK 204
            +G+D L++++ +                          +++     KN IDAAK AG K
Sbjct: 60  FEGVDRLLLISPS-----------------------DLEDRIQ--QHKNFIDAAKQAGVK 94

Query: 205 QIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQD------- 257
            IV + + G    +  L +             E+YL  SGIPYTI+R G   D       
Sbjct: 95  HIVYLSASGADEDSPFLLA-------RDHGATEKYLEASGIPYTILRPGWFMDNLLEFLP 147

Query: 258 ---KEGGIRELLVGKDDELLQTETRT--IARADVAEVCIQALQFEEAKFKAFDLAS 308
              +EG I              + +   + R D+AE    AL     + K ++L  
Sbjct: 148 SILEEGTIY---------GPAGDGKVAFVDRRDIAEAAAAALTEPGHEGKVYNLTG 194

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 42/238 (17%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFI--GDIRDSNSII 142
           VLVTGA G  G  +  +L +  E +  R LVR+ E       ++ + +  GD+ D  S+ 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQ--EGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLR 58

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A++GID    L   V  M                  G + E+ D    +N   AA+AAG
Sbjct: 59  AALEGIDTAYYL---VHSMGS---------------GGDF-EEADRRAARNFARAARAAG 99

Query: 203 AKQIVLVGSMG--GTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEG 260
            K+I+ +G +   G  L+  L S         + +  + L   G+P T +RA  +     
Sbjct: 100 VKRIIYLGGLIPKGEELSPHLRS---------RAEVGEILRAGGVPVTELRAAVIIGSGS 150

Query: 261 GIRELLVGKDDEL--------LQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKP 310
              E++    + L        + T  + IA  DV E  + AL       + F++    
Sbjct: 151 ASFEMVRYLVERLPVMITPRWVNTPCQPIAIRDVLEYLVAALDRPATAGETFEIGGPD 208

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 44/234 (18%)

Query: 84  TVLVTGAGGRTG-QIVYKKLKERSEQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNS 140
           ++LV GA G  G QIV + L    E Y  R LVR   + S  K  GA+ L  GD+    +
Sbjct: 2   SLLVIGATGTLGRQIVRQAL---DEGYQVRCLVRNLRKASFLKEWGAE-LVYGDLSLPET 57

Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
           + P+ +G+ A+I  +++ P      D                 +Q+DW G+   I+AAKA
Sbjct: 58  LPPSFKGVTAIIDASTSRPS-----DLYNA-------------KQIDWDGKLALIEAAKA 99

Query: 201 AGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKA--EQYLADSGIPYTIIRAGGLQDK 258
           A  K+ +   S+        LN+     I + K K+  EQ L  SGIPYTI R  G    
Sbjct: 100 AKIKRFIFF-SI--------LNAEQYPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFF-- 148

Query: 259 EGGIRELLVGKDDEL---LQTETRTIA---RADVAEVCIQALQFEEAKFKAFDL 306
           +G I +  +   ++    +  E+  I+     D A+ C+++L   E K K F L
Sbjct: 149 QGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPL 202

Length = 317

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 67.7 bits (166), Expect = 4e-13
 Identities = 55/245 (22%), Positives = 89/245 (36%), Gaps = 60/245 (24%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES---KQKIGGADDLFIGDIRDSNSI 141
           +LV GA G+ G  V + L +    +  R L R   S   K       ++  GD+ D  S+
Sbjct: 1   ILVFGATGKQGGSVVRALLKDP-GFKVRALTRDPSSPAAKALAAPGVEVVQGDLDDPESL 59

Query: 142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA 201
             A++G+  + ++T        D         E               G KN +DAAK A
Sbjct: 60  EAALKGVYGVFLVTDFWEAGGED---------EI------------AQG-KNVVDAAKRA 97

Query: 202 GAKQIVLVGSMGGTNLNHPLNSLGNG-----NILVWKRKA--EQYLADSGIPYTIIRAG- 253
           G +  V              +S+ +       +  +  KA  E+Y+  SG+P TI+R   
Sbjct: 98  GVQHFVF-------------SSVPDVEKLTLAVPHFDSKAEVEEYIRASGLPATILRPAF 144

Query: 254 ---------GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ-FEEAKFKA 303
                      Q  E G   L++  D +   T+   I  AD+        +   +   K 
Sbjct: 145 FMENFLTPPAPQKMEDGTLTLVLPLDPD---TKLPMIDVADIGPAVAAIFKDPAKFNGKT 201

Query: 304 FDLAS 308
            +LA 
Sbjct: 202 IELAG 206

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score = 66.5 bits (162), Expect = 4e-12
 Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 40/257 (15%)

Query: 39  LPEFSSHAFHARSSPSSLTSLPRTRYRRSCVSKTEAV--KVLSMAKSTVLVTGAGGRTGQ 96
            P FS H  H+R   S       +   +   +  EA+  ++ +  +    V GA G+ G 
Sbjct: 36  FPGFSKHP-HSRKLRSLDIKAQASGATKFSSAAIEAIPKELDTKDEDLAFVAGATGKVGS 94

Query: 97  IVYKKLKE---------RSEQYAARGLVRTEESKQKIGGAD-----DLFIGDIRDSNSII 142
              ++L +         RS Q A   +   ++ K  + G       ++   D+   + I 
Sbjct: 95  RTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG 154

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
           PA+   +A +++       K  FD                P ++D++  KN +DAA  A 
Sbjct: 155 PALG--NASVVICCIGASEKEVFDVTG-------------PYRIDYLATKNLVDAATVAK 199

Query: 203 AKQIVLVGSMGGTNLNHP---LNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKE 259
               +LV S+G   +  P   LN      +L WKRKAE+ L  SG+PYTI+R GG++   
Sbjct: 200 VNHFILVTSLGTNKVGFPAAILNLFWG--VLCWKRKAEEALIASGLPYTIVRPGGMERPT 257

Query: 260 GGIRE---LLVGKDDEL 273
              +E   L + ++D L
Sbjct: 258 DAYKETHNLTLSEEDTL 274

Length = 576

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 36/213 (16%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           + + GA GRTG  + ++   R   +    LVR             +  GD+ D   +  A
Sbjct: 2   IAIIGATGRTGSAIVREALARG--HEVTALVRDPAKLPAEHEKLKVVQGDVLDLEDVKEA 59

Query: 145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK 204
           ++G DA+I                    P     EG           +N + A KAAG K
Sbjct: 60  LEGQDAVISA----------LGTRNDLSPTTLHSEGT----------RNIVSAMKAAGVK 99

Query: 205 QIVLVGSMGGTNLN--HPLNSLGNGNILVWKR------KAEQYLADSGIPYTIIRAGGLQ 256
           ++++VG  G  +      L           +R      +  + L +SG+ +T +R   L 
Sbjct: 100 RLIVVGGAGSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALF 159

Query: 257 DKE--GGIRELLVGKDDELLQTETRTIARADVA 287
           D    GG   + +  D +        I+RAD+A
Sbjct: 160 DGGATGGYYRVELLVDAKG----GSRISRADLA 188

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 64.9 bits (158), Expect = 4e-12
 Identities = 56/237 (23%), Positives = 88/237 (37%), Gaps = 37/237 (15%)

Query: 83  STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSII 142
             +LVTGA G  G  V ++L  R  +   R  VR  E+   + G  ++ +GD+RD  S++
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHE--VRAAVRNPEAAAALAGGVEVVLGDLRDPKSLV 58

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
              +G+D +++++  +     D   A                          + AA+AAG
Sbjct: 59  AGAKGVDGVLLISGLL-----DGSDAFRAVQVTAV-----------------VRAAEAAG 96

Query: 203 A--KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGL--QDK 258
           A  K  V +  +G    +          +   K   E  L  SGIPYT +R         
Sbjct: 97  AGVKHGVSLSVLGADAAS-------PSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAG 149

Query: 259 EGGIRELLVGKDDELLQTETRT--IARADVAEVCIQALQFEEAKFKAFDLASKPEGT 313
              I          + +   R   IA  DVAE    AL       + ++LA     T
Sbjct: 150 AAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALT 206

Length = 275

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 56/226 (24%), Positives = 84/226 (37%), Gaps = 54/226 (23%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE--SKQKIGGADDLFIGDIRDSNSII 142
           +LVTGA GR G  V   L E       R LVR++E  +     GA ++ +GD+ D   + 
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRP--VRALVRSDERAAALAARGA-EVVVGDLDDPAVLA 57

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A+ G+DA+  L            PA        + + A          +    A + AG
Sbjct: 58  AALAGVDAVFFLAP----------PAPTADARPGYVQAA----------EAFASALREAG 97

Query: 203 AKQIVLVGSMGGTNLNHPLNSLGNGNILV-WKRKAEQYLADSGIPYTIIRAGGLQD---- 257
            K++V + S  G +   P      G I   W    EQ L  +G+P   +R     +    
Sbjct: 98  VKRVVNL-SSVGADPESPS-----GLIRGHW--LMEQVLNWAGLPVVHLRPAWFMENLLS 149

Query: 258 ------KEGGIRELLVGKDDELLQTETRT--IARADVAEVCIQALQ 295
                 K G +     G        + R   IA  D+A V  + L 
Sbjct: 150 QAPSIRKAGVLALPFPG--------DGRLPPIATDDIARVAAKLLL 187

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 56.1 bits (135), Expect = 7e-09
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 25/183 (13%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           +LVTG  G  G  + ++L         RGL R  +    +    +  + D+ D + +   
Sbjct: 3   ILVTGGAGFIGSHLVERLLAAGHDV--RGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDEL 60

Query: 145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK 204
            +G+   +I  +A          +    P  + +       V+  G  N ++AA+AAG K
Sbjct: 61  AKGVPDAVIHLAAQS----SVPDSNASDPAEFLD-------VNVDGTLNLLEAARAAGVK 109

Query: 205 QIVLVGSM---GGTNLNHPLN-SLGNGNILVW----KRKAEQYLAD----SGIPYTIIRA 252
           + V   S+    G     P++  LG    L      K  AEQ L       G+P  I+R 
Sbjct: 110 RFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRP 169

Query: 253 GGL 255
             +
Sbjct: 170 FNV 172

Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 24/133 (18%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD----DLFIGDIRDSNS 140
           +LVTGA G  G  + + L  +  +   R LVR   S       D    ++  GD+ D+ S
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYR--VRALVR---SGSDAVLLDGLPVEVVEGDLTDAAS 55

Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
           +  A++G D +  L +               R E Y        + +  G +N +DAA  
Sbjct: 56  LAAAMKGCDRVFHLAA-------FTSLWAKDRKELY--------RTNVEGTRNVLDAALE 100

Query: 201 AGAKQIVLVGSMG 213
           AG +++V   S+ 
Sbjct: 101 AGVRRVVHTSSIA 113

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 60/255 (23%), Positives = 95/255 (37%), Gaps = 75/255 (29%)

Query: 84  TVLVTGAGGRTGQIVYKKLKE---------RSEQYAARGLVRTEESKQKIGGADDLFIGD 134
            V V GA G  G+ V  +L +         R E YA R LV          G       D
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLV------MGDLGQVLFVEFD 55

Query: 135 IRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ 194
           +RD  SI  A++G D +I L   +                F F      E V   G +  
Sbjct: 56  LRDDESIRKALEGSDVVINLVGRLY-----------ETKNFSF------EDVHVEGPERL 98

Query: 195 IDAAKAAGAKQIVLVGSMGGTNLNHP---LNSLGNGNILVWKRKAEQYLADSGIPYTIIR 251
             AAK AG ++++ + ++ G + N P   L S         K + E+ + ++    TI+R
Sbjct: 99  AKAAKEAGVERLIHISAL-GADANSPSKYLRS---------KAEGEEAVREAFPEATIVR 148

Query: 252 AGGLQDKEGGIRELLVGKDDELL-------------------QTETRTIARADVAEVCIQ 292
                        ++ G++D  L                   QT+ + +   DVAE   +
Sbjct: 149 PS-----------VVFGREDRFLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIAR 197

Query: 293 ALQFEEAKFKAFDLA 307
           AL+  E + K ++L 
Sbjct: 198 ALKDPETEGKTYELV 212

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 42/177 (23%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-----QKIGGADDLFIGDIRDSN 139
           +LV GA G  G  V +   +    +  R LVR  +S+     +  G   +L  GD+ D  
Sbjct: 1   ILVFGATGYQGGSVVRASLKAG--HPVRALVRDPKSELAKSLKAAGV--ELVEGDLDDHE 56

Query: 140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK 199
           S++ A++G+D +  +T                   +  +E            K   DAAK
Sbjct: 57  SLVEALKGVDVVFSVT-----------------GFWLSKEIED--------GKKLADAAK 91

Query: 200 AAGAKQIVLVGSMGGTNLNHPLNSLGN-GNILVW--KRKAEQYLADSGIPYTIIRAG 253
            AG K  +     G    N    S G    +  +  K + E+Y+   GIPYT + AG
Sbjct: 92  EAGVKHFIP-SEFG----NDVDRSNGVEPAVPHFDSKAEVERYIRALGIPYTFVYAG 143

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 29/179 (16%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
            VLVTGA G  G+ +  KL  R      R  VR  E+ +      +L      D +S   
Sbjct: 1   KVLVTGANGFIGRALVDKLLSR--GEEVRIAVRNAENAEPSVVLAELP-----DIDSFTD 53

Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
              G+DA++ L + V  M       +G  P   + +      V+    +    AA   G 
Sbjct: 54  LFLGVDAVVHLAARVHVMND-----QGADPLSDYRK------VNTELTRRLARAAARQGV 102

Query: 204 KQIVLVGSM---GGTNLNHPLNSLGNGNIL----VWKRKAEQYL----ADSGIPYTIIR 251
           K+ V + S+   G   +  P +              K +AE+ L    A  G+   I+R
Sbjct: 103 KRFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILR 161

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 49.0 bits (118), Expect = 1e-06
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 35/141 (24%)

Query: 85  VLVTGAGGRTG-----QIVYKKLKE-----RSE--QYAARGLVRTEESKQKIGGADDLFI 132
           VLVTG GG  G     QI+    K+     R E   Y  R  +R E +  K+      FI
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKL----RFFI 56

Query: 133 GDIRDSNSIIPAIQGIDALIILTSA----VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
           GD+RD   +  A++      +  +A    VP +            E+   E     + + 
Sbjct: 57  GDVRDRERLERAMEQHGVDTVFHAAALKHVPLV------------EYNPMEAI---KTNV 101

Query: 189 IGQKNQIDAAKAAGAKQIVLV 209
           +G +N  +AA   G ++ VL+
Sbjct: 102 LGTENVAEAAIENGVEKFVLI 122

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 28/136 (20%), Positives = 41/136 (30%), Gaps = 26/136 (19%)

Query: 86  LVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE----ESKQKIGGADDLFIGDIRDSNSI 141
           LVTG GG  G+ + + L    E    R                        GD+ D   +
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDL 60

Query: 142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWI----GQKNQIDA 197
             A+QG D +I   + +                     G             G +N +DA
Sbjct: 61  RRALQGSDVVIHTAAIIDVF------------------GKAYRDTIMKVNVKGTQNVLDA 102

Query: 198 AKAAGAKQIVLVGSMG 213
              AG + +V   SM 
Sbjct: 103 CVKAGVRVLVYTSSME 118

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 46.1 bits (110), Expect = 9e-06
 Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 37/147 (25%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLF----IG 133
            VLVTGA G     + ++L +    Y  RG VR+     K+       G +D      + 
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAG--YKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVD 58

Query: 134 DIRDSNSIIPAIQGIDALIILTSAVPKMKPDF-----DPAKGGRPEFYFEEGAYPEQVDW 188
           D+   N+   A++G+D +I + S  P   PD      DPA                    
Sbjct: 59  DLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAV------------------- 99

Query: 189 IGQKNQIDAAKAAGA-KQIVLVGSMGG 214
            G  N ++AAKAAG+ K++VL  S+  
Sbjct: 100 EGTLNVLEAAKAAGSVKRVVLTSSVAA 126

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 59/259 (22%), Positives = 95/259 (36%), Gaps = 57/259 (22%)

Query: 81  AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE----ESKQKIGGADDL-----F 131
              T+LVTG  G  G  + +++ +   +       R E    E  +++            
Sbjct: 1   KGKTILVTGGAGSIGSELVRQILKFGPK-KLIVFDRDENKLHELVRELRSRFPHDKLRFI 59

Query: 132 IGDIRDSNSI--IPAIQGIDALIILTSA----VPKMKPDFDPAKGGRPEFYFEEGAYPEQ 185
           IGD+RD   +      +G D  I+  +A    VP M            E   EE     +
Sbjct: 60  IGDVRDKERLRRAFKERGPD--IVFHAAALKHVPSM------------EDNPEEAI---K 102

Query: 186 VDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLAD--- 242
            + +G KN IDAA   G ++ V + +    N   P+N +G       KR AE+ L     
Sbjct: 103 TNVLGTKNVIDAAIENGVEKFVCISTDKAVN---PVNVMG-----ATKRVAEKLLLAKNE 154

Query: 243 --SGIPYTIIRAGGLQDKEGGIREL---LVGKDDELLQTE---TR---TIARADVAEVCI 291
             S   ++ +R G +    G +  L    + K   L  T+   TR   TI  A   ++ +
Sbjct: 155 YSSSTKFSTVRFGNVLGSRGSVLPLFKKQIKKGGPLTVTDPDMTRFFMTIPEA--VDLVL 212

Query: 292 QALQFEEAKFKAFDLASKP 310
           QA    +           P
Sbjct: 213 QACILGDGGGIFLLDMGPP 231

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 45/174 (25%)

Query: 84  TVLVTGAGGRTG-QIVYKKLK---------ERSE--QYAARGLVRTEESKQKIGGADDLF 131
           TVLVTG GG  G ++  + LK          R E   Y         E ++K       F
Sbjct: 252 TVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLID-----MELREKFPELKLRF 306

Query: 132 -IGDIRDSNSIIPAIQGIDALIILTSA----VPKMKPDFDPAKGGRPEFYFEEGAYPEQV 186
            IGD+RD + +  A++G    I+  +A    VP +            E+  EE     + 
Sbjct: 307 YIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLV------------EYNPEEAI---KT 351

Query: 187 DWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYL 240
           + +G +N  +AA   G K+ VL+ +    N   P N +G       KR AE+  
Sbjct: 352 NVLGTENVAEAAIKNGVKKFVLISTDKAVN---PTNVMG-----ATKRLAEKLF 397

Length = 588

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDL-FI-GDIRDSNSI 141
           +VLVTG  G  G+ + K+L ER   Y     +             ++ F+ GDI D N +
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRNDV 60

Query: 142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA 201
             A+ G D +    + VP   P          + Y+E       V+  G +N +DA +  
Sbjct: 61  EQALSGADCVFHTAAIVPLAGPR---------DLYWE-------VNVGGTQNVLDACQRC 104

Query: 202 GAKQIVLVGS----MGGTNLNHPLNSL 224
           G ++ V   S     GG N+++   +L
Sbjct: 105 GVQKFVYTSSSSVIFGGQNIHNGDETL 131

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 21/136 (15%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDSNSII 142
            VLVTGA G  G  V + L E+      R LVR    ++ + G D ++  GD+RD  S+ 
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQG--EEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLR 59

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A+ G  AL  + +      PD         E Y          +  G +N + AA  AG
Sbjct: 60  KAVAGCRALFHVAADYRLWAPD-------PEEMY--------AANVEGTRNLLRAALEAG 104

Query: 203 AKQIVL---VGSMGGT 215
            +++V    V ++G  
Sbjct: 105 VERVVYTSSVATLGVR 120

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score = 44.7 bits (105), Expect = 4e-05
 Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 28/152 (18%)

Query: 75  VKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGAD 128
           V V S A  TV VTGAGG     + K L ER   Y  +G VR  +  +        GG +
Sbjct: 3   VDVASPAGKTVCVTGAGGYIASWIVKILLERG--YTVKGTVRNPDDPKNTHLRELEGGKE 60

Query: 129 DLFI--GDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQV 186
            L +   D++D  ++  AI G D +    S V       DP +   P             
Sbjct: 61  RLILCKADLQDYEALKAAIDGCDGVFHTASPVTD-----DPEQMVEPAVN---------- 105

Query: 187 DWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN 218
              G K  I+AA  A  K++V+  S+G   ++
Sbjct: 106 ---GAKFVINAAAEAKVKRVVITSSIGAVYMD 134

Length = 342

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 38/184 (20%), Positives = 63/184 (34%), Gaps = 37/184 (20%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           +LVTG  G  G  + ++L +    Y    L R   S+    G      GD+ D +++   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEG--YEVIVLGRRRRSESLNTGRIRFHEGDLTDPDALERL 58

Query: 145 IQG--IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
           +     DA+I L +           A    P  +            +G    ++AA+ AG
Sbjct: 59  LAEVQPDAVIHLAAQSG------VGASFEDPADFIRANV-------LGTLRLLEAARRAG 105

Query: 203 AKQIVLVGS--MGG---------TNLNHPLNSLGNGNILVWKRKAEQYLADS----GIPY 247
            K+ V   S  + G              PL+          K  AE+ +       G+  
Sbjct: 106 VKRFVFASSSEVYGDVADPPITEDTPLGPLSPYA-----AAKLAAERLVEAYARAYGLRA 160

Query: 248 TIIR 251
            I+R
Sbjct: 161 VILR 164

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 59/277 (21%), Positives = 96/277 (34%), Gaps = 68/277 (24%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
           T  V GA G  G+ V ++L+ R      R + R+      + G  ++   D  D++S+I 
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDV--RLVSRSGSKLAWLPG-VEIVAADAMDASSVIA 57

Query: 144 AIQGIDALIILTSAVP--KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA 201
           A +G D +I   +     + +  F P                        +N + AA+A 
Sbjct: 58  AARGAD-VIYHCANPAYTRWEELFPPL----------------------MENVVAAAEAN 94

Query: 202 GAKQIVLVGS--MGGTNLN------HPLNSLGN-GNILVWKRKA--EQYLA---DSGIPY 247
           GAK +VL G+  M G           P       G I    R    E+ LA      I  
Sbjct: 95  GAK-LVLPGNVYMYGPQAGSPITEDTPFQPTTRKGRI----RAEMEERLLAAHAKGDIRA 149

Query: 248 TIIRAG--------------GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQA 293
            I+RA                L     G   +  G + +     T      DVA   +  
Sbjct: 150 LIVRAPDFYGPGAINSWLGAALFAILQGKTAVFPG-NLDTPHEWTYL---PDVARALVTL 205

Query: 294 LQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR 330
            +  +A  +A+ L      T   T++  A+ ++   R
Sbjct: 206 AEEPDAFGEAWHLPGAGAIT---TRELIAIAARAAGR 239

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 23/130 (17%)

Query: 85  VLVTGAGGRTGQIVYKKL--KERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSI- 141
           +LVTGA G  G+++ ++L    R          R   S  K+    +    DIRD  +  
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPPKV----EYVRLDIRDPAAAD 56

Query: 142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA 201
           +   +  DA++ L           DP + G         A   +++  G +N +DA  AA
Sbjct: 57  VFREREADAVVHLAFI-------LDPPRDG---------AERHRINVDGTQNVLDACAAA 100

Query: 202 GAKQIVLVGS 211
           G  ++V+  S
Sbjct: 101 GVPRVVVTSS 110

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 17/83 (20%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVR---------TEESKQKIGGADDLFIGDI 135
           VLVTGA G  G  + + L  +   Y  R  V           + S  ++    ++  GDI
Sbjct: 1   VLVTGADGFIGSHLVEALVRQG--YEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDI 58

Query: 136 RDSNSIIPAIQGID------ALI 152
           RD +S+  A++G D      ALI
Sbjct: 59  RDPDSVRKAMKGCDVVFHLAALI 81

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 58/257 (22%), Positives = 85/257 (33%), Gaps = 51/257 (19%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVR--TEESKQKIGGADDLFIGDIRDSNSII 142
           + VTGA G+ G  V + L         R +VR   + +     G + +  GD      + 
Sbjct: 1   IAVTGATGQQGGSVIRHLLA-KGASQVRAVVRNVEKAATLADQGVE-VRQGDYNQPELLQ 58

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A  G   L I+T       P +D                  ++     KN  DAA+ AG
Sbjct: 59  KAFAGASKLFIITG------PHYD---------------NTLEIKQG--KNVADAARRAG 95

Query: 203 AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKA--EQYLADSGIPYTIIRAGGLQDKEG 260
            K I   G         PL             K   E  +  +GIPYT +R G     E 
Sbjct: 96  VKHIYSTGYAFAEESAIPL----------AHVKLAVEYAIRTTGIPYTFLRNGLYT--EN 143

Query: 261 GIRELLVGKDDELLQTETRT-------IARADVAEVCIQALQFEEAKFKAFDLASKPEGT 313
            + E L   D                 + R D+     Q L+ E  + K  +L S     
Sbjct: 144 FVSEGLPAADTGSGAIVLPAGDGPVPSVTRNDLGPAAAQLLKEEGHEGKTINLVS-NC-R 201

Query: 314 GTPTKDFKALFSQITTR 330
            TP  +  A  S++  +
Sbjct: 202 WTP-DELAAALSRVLGK 217

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 51/236 (21%), Positives = 94/236 (39%), Gaps = 40/236 (16%)

Query: 29  VASSIPFLNSLPEFSSHAFHARSSPSSLTSLPRTRYRRSCVSKTEAVKVLSMAKSTVLVT 88
              +    +S P  +  A     +     +      R +  +  ++ +       TVLV 
Sbjct: 8   SLRAAAAASSSP-SNRLAASLGGALVRRAAAASRGSRATAAAAAQSFRSKEPKDVTVLVV 66

Query: 89  GAGGRTGQIVYKKLKERS--------EQYAARGLVRTEESKQKIGGADDLFIGDIRDSNS 140
           GA G  G+ V ++L  R         E+   RG    E++K+++ GA ++  GD+ D++S
Sbjct: 67  GATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGA-EVVFGDVTDADS 125

Query: 141 IIPAIQG----IDALI-ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI 195
           +   +      +D ++  L S             GG  + +        ++D+   KN +
Sbjct: 126 LRKVLFSEGDPVDVVVSCLAS-----------RTGGVKDSW--------KIDYQATKNSL 166

Query: 196 DAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIR 251
           DA +  GAK  VL+ ++       PL       +   K +AE    DS   Y+I+R
Sbjct: 167 DAGREVGAKHFVLLSAICVQK---PLLEFQRAKL---KFEAELQALDSDFTYSIVR 216

Length = 390

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 20/146 (13%)

Query: 84  TVLVTGAGGRTGQIVYKKLKE---RSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDSN 139
            +L+TG  G  G  V ++  +   +  +  +R   + ++ ++K   +    +IGD+RD  
Sbjct: 6   ILLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGDVRDYR 65

Query: 140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK 199
           SI+ A +G+D   I  +A  K  P          EF+  E     + + +G +N ++AA 
Sbjct: 66  SILNATRGVD--FIYHAAALKQVPSC--------EFHPMEAV---KTNVLGTENVLEAAI 112

Query: 200 AAGAKQIVLVGSMGGTNLNHPLNSLG 225
           A G K++V + +       +P+N++G
Sbjct: 113 ANGVKRVVCLSTDKAV---YPINAMG 135

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 28/133 (21%), Positives = 48/133 (36%), Gaps = 20/133 (15%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSE-QYAARGLVRTEESKQKIGGADDLFIGDIRDSNSII 142
           + LV G  G  G+ + ++L  R         +  T E      G      GD+ D   + 
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTGDLTDPQDLE 60

Query: 143 PAI--QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
            A   +G + +    S          P  G   + Y++       V+  G +N I+A + 
Sbjct: 61  KAFNEKGPNVVFHTAS----------PDHGSNDDLYYK-------VNVQGTRNVIEACRK 103

Query: 201 AGAKQIVLVGSMG 213
            G K++V   S  
Sbjct: 104 CGVKKLVYTSSAS 116

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 38.3 bits (90), Expect = 0.003
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 11/76 (14%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG------GADD---LFIGDI 135
           V VTGA G  G  + K+L +R   Y  R  VR    ++K+       GA +   LF  D+
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRG--YTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADL 58

Query: 136 RDSNSIIPAIQGIDAL 151
            D  S   AI G D +
Sbjct: 59  LDYGSFDAAIDGCDGV 74

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	331
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.98
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.98
PLN02214	342	cinnamoyl-CoA reductase	99.98
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02572	442	UDP-sulfoquinovose synthase	99.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02650	351	dihydroflavonol-4-reductase	99.97
PLN00016	378	RNA-binding protein; Provisional	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.97
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.97
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.97
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.97
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.97
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.97
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.97
PLN02583	297	cinnamoyl-CoA reductase	99.97
PLN02206	442	UDP-glucuronate decarboxylase	99.96
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.96
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.96
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.96
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PLN02653	340	GDP-mannose 4,6-dehydratase	99.96
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.96
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.96
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.96
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PLN03209	576	translocon at the inner envelope of chloroplast su	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.95
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.95
PLN02996	491	fatty acyl-CoA reductase	99.95
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.95
PRK05865	854	hypothetical protein; Provisional	99.95
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.95
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.94
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.94
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.94
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.94
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.94
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.93
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.93
PRK12320	699	hypothetical protein; Provisional	99.92
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.92
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.9
PRK06482	276	short chain dehydrogenase; Provisional	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.9
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.89
PRK07806	248	short chain dehydrogenase; Provisional	99.89
PRK08263	275	short chain dehydrogenase; Provisional	99.89
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.89
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.89
PRK05875	276	short chain dehydrogenase; Provisional	99.88
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.88
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.88
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.88
PRK06180	277	short chain dehydrogenase; Provisional	99.87
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.87
PRK06914	280	short chain dehydrogenase; Provisional	99.87
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.87
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.87
PRK06182	273	short chain dehydrogenase; Validated	99.86
PRK07067	257	sorbitol dehydrogenase; Provisional	99.86
PRK09135	249	pteridine reductase; Provisional	99.86
PRK07074	257	short chain dehydrogenase; Provisional	99.86
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.86
PRK12828	239	short chain dehydrogenase; Provisional	99.86
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.86
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK09186	256	flagellin modification protein A; Provisional	99.86
PLN02260	668	probable rhamnose biosynthetic enzyme	99.86
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.86
PRK05876	275	short chain dehydrogenase; Provisional	99.86
PRK12829	264	short chain dehydrogenase; Provisional	99.86
PRK07775	274	short chain dehydrogenase; Provisional	99.86
PRK07774	250	short chain dehydrogenase; Provisional	99.85
COG2910	211	Putative NADH-flavin reductase [General function p	99.85
PLN02253	280	xanthoxin dehydrogenase	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.85
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK05993	277	short chain dehydrogenase; Provisional	99.85
PRK10538	248	malonic semialdehyde reductase; Provisional	99.85
PRK06523	260	short chain dehydrogenase; Provisional	99.85
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK07890	258	short chain dehydrogenase; Provisional	99.85
PRK12746	254	short chain dehydrogenase; Provisional	99.85
PRK07060	245	short chain dehydrogenase; Provisional	99.84
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.84
PRK12827	249	short chain dehydrogenase; Provisional	99.84
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.84
PRK06179	270	short chain dehydrogenase; Provisional	99.84
PRK06138	252	short chain dehydrogenase; Provisional	99.84
PRK05717	255	oxidoreductase; Validated	99.84
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK12939	250	short chain dehydrogenase; Provisional	99.84
PRK09134	258	short chain dehydrogenase; Provisional	99.84
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.84
PRK07825	273	short chain dehydrogenase; Provisional	99.84
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.84
PRK06128	300	oxidoreductase; Provisional	99.84
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.83
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK07024	257	short chain dehydrogenase; Provisional	99.83
PRK06194	287	hypothetical protein; Provisional	99.83
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.83
PRK08628	258	short chain dehydrogenase; Provisional	99.83
PRK08219	227	short chain dehydrogenase; Provisional	99.83
PRK07454	241	short chain dehydrogenase; Provisional	99.83
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.82
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.82
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.82
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.82
PRK06181	263	short chain dehydrogenase; Provisional	99.82
PRK07326	237	short chain dehydrogenase; Provisional	99.82
PRK07577	234	short chain dehydrogenase; Provisional	99.82
PRK09291	257	short chain dehydrogenase; Provisional	99.82
PRK07814	263	short chain dehydrogenase; Provisional	99.82
PRK08265	261	short chain dehydrogenase; Provisional	99.82
PRK07478	254	short chain dehydrogenase; Provisional	99.82
PRK08339	263	short chain dehydrogenase; Provisional	99.82
PRK06196	315	oxidoreductase; Provisional	99.82
PRK05866	293	short chain dehydrogenase; Provisional	99.82
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK07856	252	short chain dehydrogenase; Provisional	99.81
PRK06114	254	short chain dehydrogenase; Provisional	99.81
PRK06398	258	aldose dehydrogenase; Validated	99.81
PRK06841	255	short chain dehydrogenase; Provisional	99.81
PRK08267	260	short chain dehydrogenase; Provisional	99.81
PRK08264	238	short chain dehydrogenase; Validated	99.81
PRK06500	249	short chain dehydrogenase; Provisional	99.81
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.81
PRK06101	240	short chain dehydrogenase; Provisional	99.81
PRK07985	294	oxidoreductase; Provisional	99.81
PRK07109	334	short chain dehydrogenase; Provisional	99.81
PRK07102	243	short chain dehydrogenase; Provisional	99.81
PRK07904	253	short chain dehydrogenase; Provisional	99.81
PRK06057	255	short chain dehydrogenase; Provisional	99.8
PRK06701	290	short chain dehydrogenase; Provisional	99.8
PRK08643	256	acetoin reductase; Validated	99.8
PRK07041	230	short chain dehydrogenase; Provisional	99.8
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.8
PRK07063	260	short chain dehydrogenase; Provisional	99.8
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK12743	256	oxidoreductase; Provisional	99.8
PRK05650	270	short chain dehydrogenase; Provisional	99.8
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.8
PRK08017	256	oxidoreductase; Provisional	99.8
PRK06123	248	short chain dehydrogenase; Provisional	99.8
PRK12747	252	short chain dehydrogenase; Provisional	99.8
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.8
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.8
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.8
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.8
PRK05867	253	short chain dehydrogenase; Provisional	99.8
PRK08251	248	short chain dehydrogenase; Provisional	99.8
PRK08589	272	short chain dehydrogenase; Validated	99.8
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.79
PRK12937	245	short chain dehydrogenase; Provisional	99.79
PRK08324	681	short chain dehydrogenase; Validated	99.79
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.79
PRK05693	274	short chain dehydrogenase; Provisional	99.79
PRK12742	237	oxidoreductase; Provisional	99.79
PRK07035	252	short chain dehydrogenase; Provisional	99.79
PRK06949	258	short chain dehydrogenase; Provisional	99.79
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.78
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.78
PRK06172	253	short chain dehydrogenase; Provisional	99.78
PRK09242	257	tropinone reductase; Provisional	99.78
PRK12744	257	short chain dehydrogenase; Provisional	99.78
PRK07062	265	short chain dehydrogenase; Provisional	99.78
PRK06139	330	short chain dehydrogenase; Provisional	99.78
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.78
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK06483	236	dihydromonapterin reductase; Provisional	99.78
PRK07677	252	short chain dehydrogenase; Provisional	99.77
PRK05872	296	short chain dehydrogenase; Provisional	99.77
PRK07069	251	short chain dehydrogenase; Validated	99.77
PRK06924	251	short chain dehydrogenase; Provisional	99.77
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.77
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.77
PRK07023	243	short chain dehydrogenase; Provisional	99.77
PRK07576	264	short chain dehydrogenase; Provisional	99.77
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK08226	263	short chain dehydrogenase; Provisional	99.76
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.76
PRK06198	260	short chain dehydrogenase; Provisional	99.76
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.76
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.76
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.76
PRK09072	263	short chain dehydrogenase; Provisional	99.76
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.76
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.76
PRK08703	239	short chain dehydrogenase; Provisional	99.76
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.76
PRK07832	272	short chain dehydrogenase; Provisional	99.76
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
KOG2774	366	consensus NAD dependent epimerase [General functio	99.75
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.75
PRK06197	306	short chain dehydrogenase; Provisional	99.75
PRK07831	262	short chain dehydrogenase; Provisional	99.75
PRK06484	520	short chain dehydrogenase; Validated	99.75
PRK08177	225	short chain dehydrogenase; Provisional	99.75
PRK07578	199	short chain dehydrogenase; Provisional	99.75
PRK06953	222	short chain dehydrogenase; Provisional	99.75
PRK07791	286	short chain dehydrogenase; Provisional	99.75
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.74
PLN02780	320	ketoreductase/ oxidoreductase	99.74
PRK05884	223	short chain dehydrogenase; Provisional	99.74
PRK08278	273	short chain dehydrogenase; Provisional	99.74
PRK06125	259	short chain dehydrogenase; Provisional	99.74
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.74
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK07201	657	short chain dehydrogenase; Provisional	99.74
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.74
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.73
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.73
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.73
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK12367	245	short chain dehydrogenase; Provisional	99.72
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.72
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.72
PRK06940	275	short chain dehydrogenase; Provisional	99.71
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK05855	582	short chain dehydrogenase; Validated	99.71
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.71
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK05854	313	short chain dehydrogenase; Provisional	99.7
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.69
PRK06484	520	short chain dehydrogenase; Validated	99.69
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.69
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.69
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.68
PRK05599	246	hypothetical protein; Provisional	99.68
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.68
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.67
PRK08303	305	short chain dehydrogenase; Provisional	99.67
KOG0725	270	consensus Reductases with broad range of substrate	99.64
PRK08862	227	short chain dehydrogenase; Provisional	99.63
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.63
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.62
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.61
PLN00015	308	protochlorophyllide reductase	99.6
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.6
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.59
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.59
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.58
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.54
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.54
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.53
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.51
KOG1208	314	consensus Dehydrogenases with different specificit	99.5
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.47
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.47
COG1028	251	FabG Dehydrogenases with different specificities (	99.46
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.45
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.44
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.37
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.33
PRK08309	177	short chain dehydrogenase; Provisional	99.31
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.26
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.23
PRK06720	169	hypothetical protein; Provisional	99.14
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.12
PTZ00325	321	malate dehydrogenase; Provisional	99.06
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.9
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.85
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.83
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.79
PLN00106	323	malate dehydrogenase	98.72
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.71
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.7
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.67
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.61
PRK05086	312	malate dehydrogenase; Provisional	98.58
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.54
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.52
PRK09620	229	hypothetical protein; Provisional	98.51
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.51
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.51
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.32
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.31
PRK14982	340	acyl-ACP reductase; Provisional	98.28
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.2
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.19
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.16
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.15
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.14
COG3268	382	Uncharacterized conserved protein [Function unknow	98.13
PRK09496	453	trkA potassium transporter peripheral membrane com	98.01
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.97
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.93
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.92
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.91
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.9
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.84
PRK04148	134	hypothetical protein; Provisional	97.84
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.84
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.76
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.72
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.72
PRK09496	453	trkA potassium transporter peripheral membrane com	97.71
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.69
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.69
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.65
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.65
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.61
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.61
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.59
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.59
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.56
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.56
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.54
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.5
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.43
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.43
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.43
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.39
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.39
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.38
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.36
PRK10669	558	putative cation:proton antiport protein; Provision	97.34
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.32
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.31
PRK08223	287	hypothetical protein; Validated	97.31
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.3
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.3
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.29
PLN02383	344	aspartate semialdehyde dehydrogenase	97.28
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.27
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.27
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.26
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.25
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.22
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.22
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.19
PRK08328	231	hypothetical protein; Provisional	97.17
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.16
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.15
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	97.15
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.13
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.11
PRK05442	326	malate dehydrogenase; Provisional	97.11
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.11
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.1
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.09
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.07
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.07
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.07
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.07
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.07
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.07
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	97.07
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.06
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.06
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.05
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.05
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.04
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	97.04
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.04
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.02
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.02
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.01
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.0
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.99
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.99
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.97
PRK07877	722	hypothetical protein; Provisional	96.97
PRK06223	307	malate dehydrogenase; Reviewed	96.93
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.93
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.91
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.9
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.89
PRK10537	393	voltage-gated potassium channel; Provisional	96.87
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.86
PTZ00117	319	malate dehydrogenase; Provisional	96.85
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.85
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.83
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.83
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.82
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.82
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.82
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.82
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.8
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.8
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.79
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.78
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.78
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.77
PRK08655	437	prephenate dehydrogenase; Provisional	96.77
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.76
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.76
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.75
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.75
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.75
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.74
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.73
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.73
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.72
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.71
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.71
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.7
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.7
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.69
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.68
PLN00203	519	glutamyl-tRNA reductase	96.68
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.67
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.66
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.65
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.63
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.63
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.63
PLN02602	350	lactate dehydrogenase	96.62
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.61
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.61
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.6
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.58
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.58
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.57
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.57
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.56
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.55
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.55
PRK07411	390	hypothetical protein; Validated	96.55
PRK14851	679	hypothetical protein; Provisional	96.53
PRK14852	989	hypothetical protein; Provisional	96.53
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.52
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.51
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.51
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.51
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.51
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.5
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.5
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.5
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.5
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.5
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.49
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.49
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.47
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.46
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.46
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.45
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.45
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.44
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.43
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.42
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.41
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.41
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.39
PRK05678	291	succinyl-CoA synthetase subunit alpha; Validated	96.39
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.38
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.38
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.36
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.36
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.35
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.35
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	96.35
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	96.34
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.34
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.33
PLN02928	347	oxidoreductase family protein	96.31
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.28
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.27
PRK07417	279	arogenate dehydrogenase; Reviewed	96.27
PRK07574	385	formate dehydrogenase; Provisional	96.23
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.22
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.19
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.18

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.1e-36  Score=261.25  Aligned_cols=228  Identities=21%  Similarity=0.262  Sum_probs=185.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhcCCC-CcEEEccCCCcccHHHHhc--CCCEEEEcccCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKIGGA-DDLFIGDIRDSNSIIPAIQ--GIDALIILTSAV  158 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l~~~-~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~  158 (331)
                      |+||||||+|+||+|.|.+|+++  ||+|++++.-.... +.+... .+++++|+.|.+.+.++|+  .+|+|||+||..
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~   78 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI   78 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence            57999999999999999999999  99999999865442 333333 6999999999999999997  699999999986


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCCCCcchHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNSLGNGNIL  230 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~~~~~~y~  230 (331)
                      ..      .++.++|..||       +.|+.||.+|+++|+++|+++|||.||+.+|..        ..|..  +.++|+
T Consensus        79 ~V------gESv~~Pl~Yy-------~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~--p~NPYG  143 (329)
T COG1087          79 SV------GESVQNPLKYY-------DNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLA--PINPYG  143 (329)
T ss_pred             cc------chhhhCHHHHH-------hhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCC--CCCcch
Confidence            55      67889999999       889999999999999999999999999865432        22222  337899


Q ss_pred             HHHHHHHHHHHh----cCCCEEEEecCcccCCCcc----------------hhhhhccCCccc--c-------CC--ccc
Q 046297          231 VWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG----------------IRELLVGKDDEL--L-------QT--ETR  279 (331)
Q Consensus       231 ~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~----------------~~~~~~~~~~~~--~-------~~--~~~  279 (331)
                      ++|.+.|+++++    +++++++||++++.|....                ..+...|+...+  +       ++  -++
T Consensus       144 ~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRD  223 (329)
T COG1087         144 RSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRD  223 (329)
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeee
Confidence            999999999984    6899999999999986432                223334554433  1       11  189


Q ss_pred             ccCHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          280 TIARADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +|||.|+|++++.+++.=.  -...+||+++   |+.+|..|+++.+++++|+
T Consensus       224 YIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~---G~G~SV~evi~a~~~vtg~  273 (329)
T COG1087         224 YIHVDDLADAHVLALKYLKEGGSNNIFNLGS---GNGFSVLEVIEAAKKVTGR  273 (329)
T ss_pred             eeehhHHHHHHHHHHHHHHhCCceeEEEccC---CCceeHHHHHHHHHHHhCC
Confidence            9999999999999987422  1225999999   9999999999999999985

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.5e-33  Score=259.82  Aligned_cols=231  Identities=17%  Similarity=0.093  Sum_probs=178.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh----hhc--------CCCCcEEEccCCCcccHHHHhcCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK----QKI--------GGADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~----~~l--------~~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      .+|+||||||+||||++|+++|+++  |++|++++|.....    ..+        ..++.++.+|+.|.+.+.++++++
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            3578999999999999999999999  99999999864321    111        124778999999999999999999


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--CCCC----C
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--NHPL----N  222 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--~~~~----~  222 (331)
                      |+|||+|+....      +....+|..++       ++|+.|+.+++++|++.++++|||+||..++..  ..+.    .
T Consensus        92 d~ViHlAa~~~~------~~~~~~~~~~~-------~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~  158 (348)
T PRK15181         92 DYVLHQAALGSV------PRSLKDPIATN-------SANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERI  158 (348)
T ss_pred             CEEEECccccCc------hhhhhCHHHHH-------HHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCC
Confidence            999999996432      12233444444       899999999999999999999999999865432  1111    1


Q ss_pred             CCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc------------hhhhhccCCccccCC---cccccCH
Q 046297          223 SLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG------------IRELLVGKDDELLQT---ETRTIAR  283 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~------------~~~~~~~~~~~~~~~---~~~~i~v  283 (331)
                      ..+.+.|+.+|..+|.+++    +++++++++||+++|||...            ......+....+.+.   .++++|+
T Consensus       159 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v  238 (348)
T PRK15181        159 GRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYI  238 (348)
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEH
Confidence            1233679999999998765    46899999999999998632            123444555555432   3799999


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +|+|++++.++..+.  ..+++|||++   ++.+|+.|+++.+.++++
T Consensus       239 ~D~a~a~~~~~~~~~~~~~~~~yni~~---g~~~s~~e~~~~i~~~~~  283 (348)
T PRK15181        239 ENVIQANLLSATTNDLASKNKVYNVAV---GDRTSLNELYYLIRDGLN  283 (348)
T ss_pred             HHHHHHHHHHHhcccccCCCCEEEecC---CCcEeHHHHHHHHHHHhC
Confidence            999999998776432  3568999999   899999999999998876

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=6.8e-33  Score=244.19  Aligned_cols=229  Identities=24%  Similarity=0.249  Sum_probs=180.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh------hhcC---CCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK------QKIG---GADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~------~~l~---~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      .+++|+||||+||||+||++.||++  ||+|++.+|++++.      .+++   +++..+.+|+.|++.+.+++++||+|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgV   82 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGV   82 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEE
Confidence            5689999999999999999999999  99999999998763      2232   34899999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCC----CCCCCCCc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLN----HPLNSLGN  226 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~----~~~~~~~~  226 (331)
                      +|.|.+......        +|+      .+..+..+.|+.+++++|++.. |||||++||..+....    .+......
T Consensus        83 fH~Asp~~~~~~--------~~e------~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE  148 (327)
T KOG1502|consen   83 FHTASPVDFDLE--------DPE------KELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDE  148 (327)
T ss_pred             EEeCccCCCCCC--------CcH------HhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCccccc
Confidence            999997544211        122      2345889999999999999987 9999999998643221    11001111


Q ss_pred             -------------chHHHHHHHHHH----HHHhcCCCEEEEecCcccCCCcc---------hhhhhccCCccccCCcccc
Q 046297          227 -------------GNILVWKRKAEQ----YLADSGIPYTIIRAGGLQDKEGG---------IRELLVGKDDELLQTETRT  280 (331)
Q Consensus       227 -------------~~y~~sK~~~e~----~~~~~~~~~~ilrp~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~  280 (331)
                                   ..|..+|..+|+    +.++.+++.+.+.|+.|+||...         ...++.|.....++....+
T Consensus       149 ~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~  228 (327)
T KOG1502|consen  149 ESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAF  228 (327)
T ss_pred             ccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceee
Confidence                         458899988775    45578999999999999999643         3455667777777777889


Q ss_pred             cCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          281 IARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ||++|||++++.+++.+...| .|.+.+    +..++.|+++++.+..-.
T Consensus       229 VdVrDVA~AHv~a~E~~~a~G-Ryic~~----~~~~~~ei~~~l~~~~P~  273 (327)
T KOG1502|consen  229 VDVRDVALAHVLALEKPSAKG-RYICVG----EVVSIKEIADILRELFPD  273 (327)
T ss_pred             EeHHHHHHHHHHHHcCcccCc-eEEEec----CcccHHHHHHHHHHhCCC
Confidence            999999999999999998877 577775    456699999999876543

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=2.3e-33  Score=249.96  Aligned_cols=226  Identities=24%  Similarity=0.305  Sum_probs=173.1

Q ss_pred             EEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhh--hcCC-C-CcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           86 LVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQ--KIGG-A-DDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        86 lVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~--~l~~-~-~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      |||||+||+|++|+++|+++  |  ++|++++|.+....  .+.. + .+++++|++|++++.++++++|+|||+|+...
T Consensus         1 LVTGgsGflG~~iv~~Ll~~--g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLER--GYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHC--CCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence            69999999999999999999  7  89999998765432  2211 2 34999999999999999999999999999754


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC------------CCCCCCCCcc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL------------NHPLNSLGNG  227 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~------------~~~~~~~~~~  227 (331)
                      ...       ...++..+       ++|+.||++++++|+++++|+|||+||..+...            ..|.+.....
T Consensus        79 ~~~-------~~~~~~~~-------~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~  144 (280)
T PF01073_consen   79 PWG-------DYPPEEYY-------KVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLD  144 (280)
T ss_pred             ccC-------cccHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccC
Confidence            321       12233344       899999999999999999999999999965322            2233333346


Q ss_pred             hHHHHHHHHHHHHHhc---------CCCEEEEecCcccCCCcc-----hhhhh-ccCCcccc---CCcccccCHHHHHHH
Q 046297          228 NILVWKRKAEQYLADS---------GIPYTIIRAGGLQDKEGG-----IRELL-VGKDDELL---QTETRTIARADVAEV  289 (331)
Q Consensus       228 ~y~~sK~~~e~~~~~~---------~~~~~ilrp~~v~g~~~~-----~~~~~-~~~~~~~~---~~~~~~i~v~Dva~~  289 (331)
                      .|+.+|..+|+++.+.         .+.+++|||..||||...     ..... .+......   ....+++|++|+|.+
T Consensus       145 ~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~a  224 (280)
T PF01073_consen  145 PYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHA  224 (280)
T ss_pred             chHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHH
Confidence            8999999999987642         278999999999999764     12222 22122222   234789999999999


Q ss_pred             HHHHhcC-------cccCCceEEeccCCCCCCCC-HHHHHHHHHHhhcc
Q 046297          290 CIQALQF-------EEAKFKAFDLASKPEGTGTP-TKDFKALFSQITTR  330 (331)
Q Consensus       290 ~~~~l~~-------~~~~~~~~~i~~~~~~~~~t-~~e~~~~~~~~~g~  330 (331)
                      ++++.+.       ....|+.|+|++   +++.. +.|+...+.+.+|.
T Consensus       225 hvlA~~~L~~~~~~~~~~G~~y~itd---~~p~~~~~~f~~~~~~~~G~  270 (280)
T PF01073_consen  225 HVLAAQALLEPGKPERVAGQAYFITD---GEPVPSFWDFMRPLWEALGY  270 (280)
T ss_pred             HHHHHHHhccccccccCCCcEEEEEC---CCccCcHHHHHHHHHHHCCC
Confidence            9987642       246789999999   89999 99999988888773

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.2e-32  Score=250.68  Aligned_cols=218  Identities=26%  Similarity=0.378  Sum_probs=175.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+|+|||||||||++++++|+++  ||+|++++|+.++...+. .+++++.+|+.|++++.++++++|+|||+++...  
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~--   76 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRP--   76 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCC--
Confidence            57999999999999999999999  999999999876544332 3689999999999999999999999999876321  


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA  241 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  241 (331)
                               .++...       .++|+.++.+++++|+++|+++||++||.+.. ..      +..+|..+|..+|++++
T Consensus        77 ---------~~~~~~-------~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~-~~------~~~~~~~~K~~~e~~l~  133 (317)
T CHL00194         77 ---------SDLYNA-------KQIDWDGKLALIEAAKAAKIKRFIFFSILNAE-QY------PYIPLMKLKSDIEQKLK  133 (317)
T ss_pred             ---------CCccch-------hhhhHHHHHHHHHHHHHcCCCEEEEecccccc-cc------CCChHHHHHHHHHHHHH
Confidence                     122222       37899999999999999999999999987542 11      12458899999999999


Q ss_pred             hcCCCEEEEecCcccCCCcc--hhhhhccCCcccc--CCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCH
Q 046297          242 DSGIPYTIIRAGGLQDKEGG--IRELLVGKDDELL--QTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       242 ~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~  317 (331)
                      +.+++++++||+.+|+....  ....+.+....+.  +..++++|++|+|++++.+++++...+++||+++   ++.+|+
T Consensus       134 ~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g---~~~~s~  210 (317)
T CHL00194        134 KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVG---PKSWNS  210 (317)
T ss_pred             HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecC---CCccCH
Confidence            99999999999988865321  1112222222221  3457889999999999999988766789999999   899999


Q ss_pred             HHHHHHHHHhhcc
Q 046297          318 KDFKALFSQITTR  330 (331)
Q Consensus       318 ~e~~~~~~~~~g~  330 (331)
                      .|+++++.+++|+
T Consensus       211 ~el~~~~~~~~g~  223 (317)
T CHL00194        211 SEIISLCEQLSGQ  223 (317)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999885

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=4e-32  Score=253.91  Aligned_cols=231  Identities=15%  Similarity=0.199  Sum_probs=175.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      .|+||||||+||||++|+++|++++ |++|++++|+.++...+        ..+++++.+|+.|.+.+.++++++|+|||
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~-g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH   92 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTET-PHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN   92 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcC-CCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence            4789999999999999999999982 49999999876554332        23588999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCC--
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNS--  223 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~--  223 (331)
                      +|+.....      ....+|...+       ..|+.++.+++++|++.+ ++||++||..++..        ..|..+  
T Consensus        93 lAa~~~~~------~~~~~~~~~~-------~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~  158 (386)
T PLN02427         93 LAAICTPA------DYNTRPLDTI-------YSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDP  158 (386)
T ss_pred             cccccChh------hhhhChHHHH-------HHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccc
Confidence            99863321      0112233333       579999999999999887 89999999854421        111100  


Q ss_pred             ------------------CCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcch-------------------
Q 046297          224 ------------------LGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGGI-------------------  262 (331)
Q Consensus       224 ------------------~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~~-------------------  262 (331)
                                        ...+.|+.+|..+|+++..    ++++++++||+++||+....                   
T Consensus       159 ~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~  238 (386)
T PLN02427        159 AFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS  238 (386)
T ss_pred             ccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHH
Confidence                              0124699999999998864    68999999999999986321                   


Q ss_pred             hhhhccCCccccC---CcccccCHHHHHHHHHHHhcCcc-cCCceEEeccCCCC-CCCCHHHHHHHHHHhhcc
Q 046297          263 RELLVGKDDELLQ---TETRTIARADVAEVCIQALQFEE-AKFKAFDLASKPEG-TGTPTKDFKALFSQITTR  330 (331)
Q Consensus       263 ~~~~~~~~~~~~~---~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~i~~~~~~-~~~t~~e~~~~~~~~~g~  330 (331)
                      .....+.+..+.+   ..++|+|++|+|++++.+++++. ..+++||+++   + +.+++.|+++.+.+.+|+
T Consensus       239 ~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~---~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        239 NNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGN---PNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             HHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCC---CCCCccHHHHHHHHHHHhcc
Confidence            1222344433333   23689999999999999998764 4578999998   7 589999999999998774

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.98  E-value=5.3e-31  Score=243.01  Aligned_cols=231  Identities=14%  Similarity=0.212  Sum_probs=176.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCC-CcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIR-DSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~-d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      +|+||||||+||||++|++.|++++ ||+|++++|+.++...+.  ..++++.+|++ +.+.+.++++++|+|||+|+..
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~-~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~   79 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETT-DWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIA   79 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCC-CCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccC
Confidence            3689999999999999999999862 699999999765544432  35889999998 6677888889999999999863


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCC-C--CC--CC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHP-L--NS--LG  225 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~-~--~~--~~  225 (331)
                      ..      +....+|+..+       ++|+.++.+++++|++.+ ++||++||..++..        +.+ .  .+  .+
T Consensus        80 ~~------~~~~~~p~~~~-------~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p  145 (347)
T PRK11908         80 TP------ATYVKQPLRVF-------ELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKP  145 (347)
T ss_pred             Ch------HHhhcCcHHHH-------HHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCc
Confidence            22      11234555555       889999999999999988 79999999865431        111 0  01  12


Q ss_pred             cchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------------hhhhhccCCccccC---CcccccC
Q 046297          226 NGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------------IRELLVGKDDELLQ---TETRTIA  282 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------------~~~~~~~~~~~~~~---~~~~~i~  282 (331)
                      .+.|+.+|..+|++++    +++++++++||+++||+...                +..+..+....+.+   ..++++|
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~  225 (347)
T PRK11908        146 RWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTD  225 (347)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecccc
Confidence            2579999999998876    47899999999999998631                11223344434432   3478999


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEeccCCCC-CCCCHHHHHHHHHHhhcc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLASKPEG-TGTPTKDFKALFSQITTR  330 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~-~~~t~~e~~~~~~~~~g~  330 (331)
                      ++|++++++.+++++.  ..+++||+++   + +.+|+.|+++.+.+.+|+
T Consensus       226 v~D~a~a~~~~~~~~~~~~~g~~yni~~---~~~~~s~~e~~~~i~~~~~~  273 (347)
T PRK11908        226 IDDGIDALMKIIENKDGVASGKIYNIGN---PKNNHSVRELANKMLELAAE  273 (347)
T ss_pred             HHHHHHHHHHHHhCccccCCCCeEEeCC---CCCCcCHHHHHHHHHHHhcC
Confidence            9999999999998763  4578999998   6 479999999999988774

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.98  E-value=8.2e-31  Score=224.09  Aligned_cols=229  Identities=15%  Similarity=0.151  Sum_probs=189.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-----CchhhhcC--CCCcEEEccCCCcccHHHHhc--CCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-----EESKQKIG--GADDLFIGDIRDSNSIIPAIQ--GIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-----~~~~~~l~--~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~  153 (331)
                      |++|||||.||||+.+++.++++.+..+|+.++.-     .+.+..+.  ++..|+++|+.|.+.+.++++  .+|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            57999999999999999999999777788988873     34444443  369999999999999999998  5999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCCC----------CCCCCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGTN----------LNHPLN  222 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~~----------~~~~~~  222 (331)
                      +|+-.+.      .-++.+|+...       ++|+.||.++++++++...+ ||+++|+-.++.          |+.|.+
T Consensus        81 fAAESHV------DRSI~~P~~Fi-------~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~  147 (340)
T COG1088          81 FAAESHV------DRSIDGPAPFI-------QTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYN  147 (340)
T ss_pred             echhccc------cccccChhhhh-------hcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCC
Confidence            9996544      33455565555       99999999999999999764 999999975422          333333


Q ss_pred             CCCcchHHHHHHHHHHHH----HhcCCCEEEEecCcccCCCcc--------hhhhhccCCccccCCc---ccccCHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYL----ADSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQTE---TRTIARADVA  287 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~----~~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~~~---~~~i~v~Dva  287 (331)
                      |.  ++|.+||+.++-++    +.+|++++|.|+.+-|||..-        +.+.+.|.+.++++.+   ++|+||+|-+
T Consensus       148 Ps--SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~  225 (340)
T COG1088         148 PS--SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHC  225 (340)
T ss_pred             CC--CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHH
Confidence            32  67999999876554    568999999999999999754        5677789999998765   8999999999


Q ss_pred             HHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          288 EVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++-.+++.... |++|||++   ++..+-.|+++.+.+++|+
T Consensus       226 ~ai~~Vl~kg~~-GE~YNIgg---~~E~~Nlevv~~i~~~l~~  264 (340)
T COG1088         226 RAIDLVLTKGKI-GETYNIGG---GNERTNLEVVKTICELLGK  264 (340)
T ss_pred             HHHHHHHhcCcC-CceEEeCC---CccchHHHHHHHHHHHhCc
Confidence            999999988766 89999999   8899999999999999986

>PLN02214 cinnamoyl-CoA reductase

Probab=99.98  E-value=9.3e-31  Score=240.64  Aligned_cols=224  Identities=24%  Similarity=0.258  Sum_probs=173.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-----hhcC---CCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-----QKIG---GADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-----~~l~---~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      .+++||||||+||||++++++|+++  ||+|++++|+.++.     ..+.   ..++++.+|++|.+.+.++++++|+||
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   86 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF   86 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence            3678999999999999999999999  99999999976532     1221   247789999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC-CCCC-C-CC---CCC---
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG-GTNL-N-HP---LNS---  223 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~-~~~~-~-~~---~~~---  223 (331)
                      |+|+...           .+|...+       ++|+.++.+++++|+++++++||++||.. .+.. . .+   ...   
T Consensus        87 h~A~~~~-----------~~~~~~~-------~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~  148 (342)
T PLN02214         87 HTASPVT-----------DDPEQMV-------EPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCW  148 (342)
T ss_pred             EecCCCC-----------CCHHHHH-------HHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccC
Confidence            9998531           2333333       88999999999999999999999999963 3311 1 11   110   


Q ss_pred             -------CCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch---------hhhhccCCccccCCcccccCH
Q 046297          224 -------LGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI---------RELLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       224 -------~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~---------~~~~~~~~~~~~~~~~~~i~v  283 (331)
                             ...+.|+.+|..+|+++.    +++++++++||+++|||....         ...+.+......+..++|||+
T Consensus       149 ~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V  228 (342)
T PLN02214        149 SDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDV  228 (342)
T ss_pred             CChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEH
Confidence                   122579999999998775    469999999999999997431         122334433334456799999


Q ss_pred             HHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          284 ADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +|+|++++.+++.+.. +..||+++    ...++.|+++.+.+..+
T Consensus       229 ~Dva~a~~~al~~~~~-~g~yn~~~----~~~~~~el~~~i~~~~~  269 (342)
T PLN02214        229 RDVALAHVLVYEAPSA-SGRYLLAE----SARHRGEVVEILAKLFP  269 (342)
T ss_pred             HHHHHHHHHHHhCccc-CCcEEEec----CCCCHHHHHHHHHHHCC
Confidence            9999999999987654 34899986    46899999999999875

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=1.5e-30  Score=237.50  Aligned_cols=226  Identities=19%  Similarity=0.201  Sum_probs=171.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh---h---c---CCCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ---K---I---GGADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~---~---l---~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      +++||||||+||||++|+++|+++  ||+|++++|+.....   .   +   ...++++++|+.|++.+.++++++|+||
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            578999999999999999999999  999999999865321   1   1   1357899999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCC--CCCC-----------
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGG--TNLN-----------  218 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~--~~~~-----------  218 (331)
                      |+|+....        ...+|.      ...+++|+.++.+++++|++. ++++||++||.++  +...           
T Consensus        82 h~A~~~~~--------~~~~~~------~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~  147 (322)
T PLN02662         82 HTASPFYH--------DVTDPQ------AELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDET  147 (322)
T ss_pred             EeCCcccC--------CCCChH------HHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcc
Confidence            99986321        112232      122388999999999999987 8999999999642  2111           


Q ss_pred             CCCCCC----CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc---------hhhhhccCCccccCCccccc
Q 046297          219 HPLNSL----GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG---------IRELLVGKDDELLQTETRTI  281 (331)
Q Consensus       219 ~~~~~~----~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~i  281 (331)
                      .+..+.    ..+.|+.+|..+|++++    +++++++++||+++|||...         ....+.+.. ..++..++|+
T Consensus       148 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i  226 (322)
T PLN02662        148 WFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWV  226 (322)
T ss_pred             cCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeE
Confidence            111111    11469999999998764    57999999999999998632         112222322 3345568999


Q ss_pred             CHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          282 ARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      |++|+|++++.+++++...+ .||++    ++.+++.|+++++.+..+
T Consensus       227 ~v~Dva~a~~~~~~~~~~~~-~~~~~----g~~~s~~e~~~~i~~~~~  269 (322)
T PLN02662        227 DVRDVANAHIQAFEIPSASG-RYCLV----ERVVHYSEVVKILHELYP  269 (322)
T ss_pred             EHHHHHHHHHHHhcCcCcCC-cEEEe----CCCCCHHHHHHHHHHHCC
Confidence            99999999999998865444 78886    467999999999998765

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.97  E-value=1.8e-30  Score=245.57  Aligned_cols=235  Identities=17%  Similarity=0.173  Sum_probs=171.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc---h----h----------hhc-------CCCCcEEEcc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE---S----K----------QKI-------GGADDLFIGD  134 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~---~----~----------~~l-------~~~~~~v~~D  134 (331)
                      ..++|+||||||+||||++|+++|+++  |++|++++|...   .    .          +.+       ..+++++.+|
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD  121 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence            345788999999999999999999999  999999875321   0    0          000       1258899999


Q ss_pred             CCCcccHHHHhc--CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEcc
Q 046297          135 IRDSNSIIPAIQ--GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGS  211 (331)
Q Consensus       135 l~d~~~~~~~l~--~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS  211 (331)
                      ++|.+.+.++++  ++|+|||+|+....      +....+|+.    .....++|+.|+.+++++|++.+++ +||++||
T Consensus       122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~------~~~~~~~~~----~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS  191 (442)
T PLN02572        122 ICDFEFLSEAFKSFEPDAVVHFGEQRSA------PYSMIDRSR----AVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGT  191 (442)
T ss_pred             CCCHHHHHHHHHhCCCCEEEECCCcccC------hhhhcChhh----HHHHHHHHHHHHHHHHHHHHHhCCCccEEEEec
Confidence            999999999998  58999999975322      111222210    0112378999999999999999986 9999999


Q ss_pred             CCCCCCC-CC------------------CCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch------
Q 046297          212 MGGTNLN-HP------------------LNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI------  262 (331)
Q Consensus       212 ~~~~~~~-~~------------------~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~------  262 (331)
                      ..+|... .+                  .+..+.+.|+.+|..+|.+++    +++++++++||+++||+....      
T Consensus       192 ~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~  271 (442)
T PLN02572        192 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEE  271 (442)
T ss_pred             ceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccc
Confidence            8654311 00                  111223679999999998775    469999999999999996421      


Q ss_pred             -------------------hhhhccCCccccC---CcccccCHHHHHHHHHHHhcCcccCC--ceEEeccCCCCCCCCHH
Q 046297          263 -------------------RELLVGKDDELLQ---TETRTIARADVAEVCIQALQFEEAKF--KAFDLASKPEGTGTPTK  318 (331)
Q Consensus       263 -------------------~~~~~~~~~~~~~---~~~~~i~v~Dva~~~~~~l~~~~~~~--~~~~i~~~~~~~~~t~~  318 (331)
                                         .....++...+.+   ..++|+|++|+|++++.+++++...|  ++||+++    +.+++.
T Consensus       272 li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs----~~~si~  347 (442)
T PLN02572        272 LINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT----EQFSVN  347 (442)
T ss_pred             cccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC----CceeHH
Confidence                               1222344444432   33799999999999999998653333  5899975    469999


Q ss_pred             HHHHHHHHh---hc
Q 046297          319 DFKALFSQI---TT  329 (331)
Q Consensus       319 e~~~~~~~~---~g  329 (331)
                      |+++++.++   +|
T Consensus       348 el~~~i~~~~~~~g  361 (442)
T PLN02572        348 ELAKLVTKAGEKLG  361 (442)
T ss_pred             HHHHHHHHHHHhhC
Confidence            999999998   66

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=3.9e-30  Score=234.83  Aligned_cols=227  Identities=22%  Similarity=0.225  Sum_probs=170.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh---hc------CCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ---KI------GGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~---~l------~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      .+++||||||+||||++++++|+++  ||+|+++.|+.++.+   .+      ...++++.+|++|++.+.++++++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   81 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAV   81 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEE
Confidence            3578999999999999999999999  999999999865422   11      235789999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCC--CC-----------
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGT--NL-----------  217 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~--~~-----------  217 (331)
                      ||+|+....        ...+|.      ....++|+.++.+++++|++. +++|||++||.+++  ..           
T Consensus        82 ih~A~~~~~--------~~~~~~------~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E  147 (322)
T PLN02986         82 FHTASPVFF--------TVKDPQ------TELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDE  147 (322)
T ss_pred             EEeCCCcCC--------CCCCch------hhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCc
Confidence            999986321        111221      123478999999999999986 79999999997532  11           


Q ss_pred             CCCCCC----CCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc---------hhhhhccCCccccCCcccc
Q 046297          218 NHPLNS----LGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG---------IRELLVGKDDELLQTETRT  280 (331)
Q Consensus       218 ~~~~~~----~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~  280 (331)
                      +.+..+    ...+.|+.+|..+|.++.    +++++++++||+++|||...         ....+.+.. ......+++
T Consensus       148 ~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~  226 (322)
T PLN02986        148 TFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN-LFNNRFYRF  226 (322)
T ss_pred             ccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC-CCCCcCcce
Confidence            000001    112569999999987654    57999999999999998532         112223332 122334689


Q ss_pred             cCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          281 IARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +|++|+|++++.+++++...+ .||++    ++.+++.|+++++.+..+
T Consensus       227 v~v~Dva~a~~~al~~~~~~~-~yni~----~~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        227 VDVRDVALAHIKALETPSANG-RYIID----GPIMSVNDIIDILRELFP  270 (322)
T ss_pred             eEHHHHHHHHHHHhcCcccCC-cEEEe----cCCCCHHHHHHHHHHHCC
Confidence            999999999999999876544 89995    467999999999998765

>PLN02650 dihydroflavonol-4-reductase

Probab=99.97  E-value=6.9e-30  Score=235.95  Aligned_cols=227  Identities=21%  Similarity=0.268  Sum_probs=168.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh---c---C---CCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK---I---G---GADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~---l---~---~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      .++||||||+||||++++++|+++  |++|++++|+.+....   +   .   ..+.++.+|++|.+.+.++++++|+||
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence            578999999999999999999999  9999999998654332   1   1   236789999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCC---CCC-C-----
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLN---HPL-N-----  222 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~---~~~-~-----  222 (331)
                      |+|+....        ...+|.      ....++|+.++.+++++|++.+ +++||++||.+++...   .+. .     
T Consensus        83 H~A~~~~~--------~~~~~~------~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~  148 (351)
T PLN02650         83 HVATPMDF--------ESKDPE------NEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWS  148 (351)
T ss_pred             EeCCCCCC--------CCCCch------hhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCC
Confidence            99985321        011221      1223889999999999999987 7899999998532211   110 0     


Q ss_pred             --------CCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc------hhh---hhccCCccc-cCCcccc
Q 046297          223 --------SLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG------IRE---LLVGKDDEL-LQTETRT  280 (331)
Q Consensus       223 --------~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~------~~~---~~~~~~~~~-~~~~~~~  280 (331)
                              ....+.|+.+|..+|.+++    +++++++++||+++|||...      +..   ...+..... ....++|
T Consensus       149 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  228 (351)
T PLN02650        149 DLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQF  228 (351)
T ss_pred             chhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcce
Confidence                    0112479999999998664    56999999999999999642      111   111222111 1234789


Q ss_pred             cCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          281 IARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +|++|+|++++.+++++...+ .| +++   ++.+++.|+++++.+..+
T Consensus       229 v~V~Dva~a~~~~l~~~~~~~-~~-i~~---~~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        229 VHLDDLCNAHIFLFEHPAAEG-RY-ICS---SHDATIHDLAKMLREKYP  272 (351)
T ss_pred             eeHHHHHHHHHHHhcCcCcCc-eE-Eec---CCCcCHHHHHHHHHHhCc
Confidence            999999999999998765444 68 555   677999999999998765

>PLN00016 RNA-binding protein; Provisional

Probab=99.97  E-value=5.2e-30  Score=238.90  Aligned_cols=213  Identities=19%  Similarity=0.184  Sum_probs=165.6

Q ss_pred             CCCCeEEEE----CCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh-----------c-CCCCcEEEccCCCcccHHH
Q 046297           80 MAKSTVLVT----GAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-----------I-GGADDLFIGDIRDSNSIIP  143 (331)
Q Consensus        80 ~~~~~VlVt----GatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-----------l-~~~~~~v~~Dl~d~~~~~~  143 (331)
                      ..+++||||    |||||||++|++.|+++  ||+|++++|+......           + ..+++++++|+.|   +.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHh
Confidence            345789999    99999999999999999  9999999998754321           1 1248899999877   444


Q ss_pred             Hh--cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--
Q 046297          144 AI--QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--  219 (331)
Q Consensus       144 ~l--~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--  219 (331)
                      ++  .++|+|||+++.                             +..++++++++|++.|+++||++||.+++....  
T Consensus       125 ~~~~~~~d~Vi~~~~~-----------------------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~  175 (378)
T PLN00016        125 KVAGAGFDVVYDNNGK-----------------------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEP  175 (378)
T ss_pred             hhccCCccEEEeCCCC-----------------------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCC
Confidence            44  479999999763                             356789999999999999999999997654321  


Q ss_pred             CCCCCC-cchHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcc-------hhhhhccCCccccCC---cccccCHHHHHH
Q 046297          220 PLNSLG-NGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG-------IRELLVGKDDELLQT---ETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~-~~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~-------~~~~~~~~~~~~~~~---~~~~i~v~Dva~  288 (331)
                      |..... ..++. +|..+|+++++.+++|+++||+++||+...       +..+..+....+++.   .++++|++|+|+
T Consensus       176 p~~E~~~~~p~~-sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~  254 (378)
T PLN00016        176 PHVEGDAVKPKA-GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLAS  254 (378)
T ss_pred             CCCCCCcCCCcc-hHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHH
Confidence            111110 01122 799999999999999999999999998642       123334444444432   367899999999


Q ss_pred             HHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          289 VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++.+++++...+++||+++   ++.+|+.|+++.+.+.+|+
T Consensus       255 ai~~~l~~~~~~~~~yni~~---~~~~s~~el~~~i~~~~g~  293 (378)
T PLN00016        255 MFALVVGNPKAAGQIFNIVS---DRAVTFDGMAKACAKAAGF  293 (378)
T ss_pred             HHHHHhcCccccCCEEEecC---CCccCHHHHHHHHHHHhCC
Confidence            99999998766678999999   8899999999999999885

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=8e-30  Score=233.07  Aligned_cols=227  Identities=23%  Similarity=0.233  Sum_probs=170.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh---c------CCCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK---I------GGADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~---l------~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      +++||||||+||||++++++|+++  ||+|++++|+......   +      ..+++++.+|++|.+.+.++++++|+||
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            578999999999999999999999  9999999988654221   1      1247889999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCC-------------CC
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTN-------------LN  218 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~-------------~~  218 (331)
                      |+||....      .....++...+       ++|+.++.+++++|++. ++++||++||..++.             |+
T Consensus        83 h~A~~~~~------~~~~~~~~~~~-------~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~  149 (325)
T PLN02989         83 HTASPVAI------TVKTDPQVELI-------NPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDET  149 (325)
T ss_pred             EeCCCCCC------CCCCChHHHHH-------HHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcC
Confidence            99996321      11112233333       88999999999999885 578999999975421             11


Q ss_pred             CCCCCC----CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch---------hhhhccCCccccCCccccc
Q 046297          219 HPLNSL----GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI---------RELLVGKDDELLQTETRTI  281 (331)
Q Consensus       219 ~~~~~~----~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~---------~~~~~~~~~~~~~~~~~~i  281 (331)
                      .+..+.    ..+.|+.+|..+|.++.    +++++++++||+++|||....         ..++.++. .+....++|+
T Consensus       150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~-~~~~~~r~~i  228 (325)
T PLN02989        150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKN-PFNTTHHRFV  228 (325)
T ss_pred             CCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCC-CCCCcCcCee
Confidence            111111    12569999999998775    468999999999999987431         11222322 2223346899


Q ss_pred             CHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          282 ARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      |++|+|++++.+++.+.. +.+||++    +..+++.|+++++.+..+
T Consensus       229 ~v~Dva~a~~~~l~~~~~-~~~~ni~----~~~~s~~ei~~~i~~~~~  271 (325)
T PLN02989        229 DVRDVALAHVKALETPSA-NGRYIID----GPVVTIKDIENVLREFFP  271 (325)
T ss_pred             EHHHHHHHHHHHhcCccc-CceEEEe----cCCCCHHHHHHHHHHHCC
Confidence            999999999999987654 3589995    457999999999999876

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.97  E-value=1.1e-29  Score=235.00  Aligned_cols=228  Identities=13%  Similarity=0.107  Sum_probs=170.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCch--hh---hc--CCCCcEEEccCCCcccHHHHhc--CCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEES--KQ---KI--GGADDLFIGDIRDSNSIIPAIQ--GIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~--~~---~l--~~~~~~v~~Dl~d~~~~~~~l~--~~d~V  151 (331)
                      +++||||||+||||+++++.|+++  |++++++ .|....  ..   .+  ...+.++.+|++|.+.+.++++  ++|+|
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V   78 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV   78 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence            368999999999999999999999  9876654 443221  11   11  1236788999999999999998  48999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---------cCCCeEEEEccCCCCCC-----
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---------AGAKQIVLVGSMGGTNL-----  217 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---------~~vk~~v~~SS~~~~~~-----  217 (331)
                      ||+||....      .....+++..+       ++|+.++.+++++|++         .++++||++||..++..     
T Consensus        79 ih~A~~~~~------~~~~~~~~~~~-------~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  145 (355)
T PRK10217         79 MHLAAESHV------DRSIDGPAAFI-------ETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD  145 (355)
T ss_pred             EECCcccCc------chhhhChHHHH-------HHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC
Confidence            999986432      11123344444       8999999999999986         35789999999754331     


Q ss_pred             -----CCCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc--------hhhhhccCCcccc---CCc
Q 046297          218 -----NHPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELL---QTE  277 (331)
Q Consensus       218 -----~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~---~~~  277 (331)
                           +.+.  .+.+.|+.+|..+|.+++    +.+++++++||+++|||...        +.....+....+.   +..
T Consensus       146 ~~~~E~~~~--~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  223 (355)
T PRK10217        146 DFFTETTPY--APSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQI  223 (355)
T ss_pred             CCcCCCCCC--CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCee
Confidence                 1122  223679999999987765    57899999999999999852        1223334443333   235


Q ss_pred             ccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          278 TRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++|++|+|++++.+++.+. .+++||+++   ++.+++.|+++.+.+.+|+
T Consensus       224 ~~~i~v~D~a~a~~~~~~~~~-~~~~yni~~---~~~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        224 RDWLYVEDHARALYCVATTGK-VGETYNIGG---HNERKNLDVVETICELLEE  272 (355)
T ss_pred             eCcCcHHHHHHHHHHHHhcCC-CCCeEEeCC---CCcccHHHHHHHHHHHhcc
Confidence            899999999999999998753 467999999   8999999999999988764

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.97  E-value=1.3e-29  Score=235.20  Aligned_cols=231  Identities=14%  Similarity=0.100  Sum_probs=173.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      .+|+||||||+||||+++++.|+++  ||+|++++|..... .......+++.+|++|.+.+.++++++|+|||+|+...
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~   97 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMG   97 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccC
Confidence            3688999999999999999999999  99999999965321 11111357889999999989988999999999998643


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC------C------CCCCCcc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH------P------LNSLGNG  227 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~------~------~~~~~~~  227 (331)
                      ....     ...++..       ....|+.++.+++++|++.++++||++||..+|....      +      .+..+.+
T Consensus        98 ~~~~-----~~~~~~~-------~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s  165 (370)
T PLN02695         98 GMGF-----IQSNHSV-------IMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD  165 (370)
T ss_pred             Cccc-----cccCchh-------hHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCC
Confidence            2110     0012222       2367999999999999999999999999986543211      1      1112336


Q ss_pred             hHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch------------hhhhc-cCCccccC---CcccccCHHHHH
Q 046297          228 NILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI------------RELLV-GKDDELLQ---TETRTIARADVA  287 (331)
Q Consensus       228 ~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~------------~~~~~-~~~~~~~~---~~~~~i~v~Dva  287 (331)
                      .|+.+|..+|+++.    +.+++++++||+++|||....            ...+. +....+++   ..++++|++|++
T Consensus       166 ~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a  245 (370)
T PLN02695        166 AYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECV  245 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHH
Confidence            89999999998764    479999999999999986421            11122 22333332   358899999999


Q ss_pred             HHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          288 EVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++.+++++  .+++||+++   ++.+++.|+++.+.+..|+
T Consensus       246 ~ai~~~~~~~--~~~~~nv~~---~~~~s~~el~~~i~~~~g~  283 (370)
T PLN02695        246 EGVLRLTKSD--FREPVNIGS---DEMVSMNEMAEIALSFENK  283 (370)
T ss_pred             HHHHHHHhcc--CCCceEecC---CCceeHHHHHHHHHHHhCC
Confidence            9999988764  256899999   8999999999999988774

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=9.7e-30  Score=235.84  Aligned_cols=235  Identities=16%  Similarity=0.125  Sum_probs=174.2

Q ss_pred             hccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------------CCCCcEEEccCCCcccHHHH
Q 046297           77 VLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------------GGADDLFIGDIRDSNSIIPA  144 (331)
Q Consensus        77 ~~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------------~~~~~~v~~Dl~d~~~~~~~  144 (331)
                      ...+++++||||||+||||++++++|+++  ||+|+++.|+.+..+.+            ...+.++.+|++|.+.+.++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~  125 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEA  125 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence            34556889999999999999999999999  99999999876543321            12467899999999999999


Q ss_pred             hcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCC--CCCC---C
Q 046297          145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMG--GTNL---N  218 (331)
Q Consensus       145 l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~--~~~~---~  218 (331)
                      ++++|+|||+++.......      ...+       ....++|+.++.+++++|++. ++++||++||..  ++..   .
T Consensus       126 i~~~d~V~hlA~~~~~~~~------~~~~-------~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~  192 (367)
T PLN02686        126 FDGCAGVFHTSAFVDPAGL------SGYT-------KSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPH  192 (367)
T ss_pred             HHhccEEEecCeeeccccc------cccc-------chhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCC
Confidence            9999999999986432110      0001       122367999999999999986 799999999962  2210   0


Q ss_pred             C-C--CC----------CCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc------hhhhhccCCccccC
Q 046297          219 H-P--LN----------SLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG------IRELLVGKDDELLQ  275 (331)
Q Consensus       219 ~-~--~~----------~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~------~~~~~~~~~~~~~~  275 (331)
                      . +  ..          ....+.|+.+|..+|.+++    +++++++++||+++|||...      ....+.+....+.+
T Consensus       193 ~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~  272 (367)
T PLN02686        193 DLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLAD  272 (367)
T ss_pred             CCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCC
Confidence            0 1  00          0122569999999998875    46899999999999999642      22333343222223


Q ss_pred             CcccccCHHHHHHHHHHHhcCc--ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          276 TETRTIARADVAEVCIQALQFE--EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       276 ~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +.++++|++|+|++++.+++..  ...+++| +++   ++.+++.|+++.+.+++|+
T Consensus       273 g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~---g~~~s~~e~~~~i~~~~g~  325 (367)
T PLN02686        273 GLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICF---DHVVSREDEAEELARQIGL  325 (367)
T ss_pred             CCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEe---CCCccHHHHHHHHHHHcCC
Confidence            4467999999999999999852  2345678 777   7899999999999999873

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=4.9e-29  Score=232.47  Aligned_cols=219  Identities=22%  Similarity=0.306  Sum_probs=174.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh------h---cCCCCcEEEccCCCcccHHHHhc----C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ------K---IGGADDLFIGDIRDSNSIIPAIQ----G  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~------~---l~~~~~~v~~Dl~d~~~~~~~l~----~  147 (331)
                      .+++||||||||+||+++++.|+++  |++|++++|+..+..      .   ..++++++.+|++|++.+.++++    +
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            4678999999999999999999999  999999999875422      1   12358899999999999999998    5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      +|+||||++....           .+...+       ++|+.++.+++++|++.|+++||++||.+++.+   .     .
T Consensus       137 ~D~Vi~~aa~~~~-----------~~~~~~-------~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p---~-----~  190 (390)
T PLN02657        137 VDVVVSCLASRTG-----------GVKDSW-------KIDYQATKNSLDAGREVGAKHFVLLSAICVQKP---L-----L  190 (390)
T ss_pred             CcEEEECCccCCC-----------CCccch-------hhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc---c-----h
Confidence            9999999884221           011223       678999999999999999999999999876432   1     3


Q ss_pred             hHHHHHHHHHHHHHh--cCCCEEEEecCcccCCCcchhhhh-ccCCccccCCc----ccccCHHHHHHHHHHHhcCcccC
Q 046297          228 NILVWKRKAEQYLAD--SGIPYTIIRAGGLQDKEGGIRELL-VGKDDELLQTE----TRTIARADVAEVCIQALQFEEAK  300 (331)
Q Consensus       228 ~y~~sK~~~e~~~~~--~~~~~~ilrp~~v~g~~~~~~~~~-~~~~~~~~~~~----~~~i~v~Dva~~~~~~l~~~~~~  300 (331)
                      .|..+|...|+.++.  .+++++++||+++|++.......+ .+....+.+.+    .++||++|+|++++.++.++...
T Consensus       191 ~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~  270 (390)
T PLN02657        191 EFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKI  270 (390)
T ss_pred             HHHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcccc
Confidence            478899999998876  899999999999998754433333 33333333322    24699999999999999877666


Q ss_pred             CceEEeccCCCC-CCCCHHHHHHHHHHhhcc
Q 046297          301 FKAFDLASKPEG-TGTPTKDFKALFSQITTR  330 (331)
Q Consensus       301 ~~~~~i~~~~~~-~~~t~~e~~~~~~~~~g~  330 (331)
                      +++||+++   + +.+|+.|+++++.+++|+
T Consensus       271 ~~~~~Igg---p~~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        271 NKVLPIGG---PGKALTPLEQGEMLFRILGK  298 (390)
T ss_pred             CCEEEcCC---CCcccCHHHHHHHHHHHhCC
Confidence            88999997   5 689999999999999885

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=2.6e-29  Score=231.37  Aligned_cols=226  Identities=19%  Similarity=0.208  Sum_probs=171.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-----hhhc--------CCCCcEEEccCCCcccHHHHhcC--
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-----KQKI--------GGADDLFIGDIRDSNSIIPAIQG--  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~l--------~~~~~~v~~Dl~d~~~~~~~l~~--  147 (331)
                      ++||||||+||||++|+++|+++  |++|++++|+.+.     ...+        ...++++.+|++|.+.+.+++++  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   78 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK   78 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence            57999999999999999999999  9999999997542     2211        13478999999999999999984  


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC---eEEEEccCCCCC--------
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK---QIVLVGSMGGTN--------  216 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk---~~v~~SS~~~~~--------  216 (331)
                      +|+|||+|+.....      ....+|...+       ++|+.|+.+++++|++.+++   +||++||..++.        
T Consensus        79 ~d~ViH~Aa~~~~~------~~~~~~~~~~-------~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~  145 (343)
T TIGR01472        79 PTEIYNLAAQSHVK------VSFEIPEYTA-------DVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQN  145 (343)
T ss_pred             CCEEEECCcccccc------hhhhChHHHH-------HHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCC
Confidence            69999999974321      1122333333       77899999999999998864   899999975432        


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc---h--------hhhhccCCcc-cc---CCc
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG---I--------RELLVGKDDE-LL---QTE  277 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~---~--------~~~~~~~~~~-~~---~~~  277 (331)
                      ++.+..  +.+.|+.+|..+|.+++    +++++++..|+.+++|+...   .        .....++... +.   ...
T Consensus       146 E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  223 (343)
T TIGR01472       146 ETTPFY--PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAK  223 (343)
T ss_pred             CCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccc
Confidence            222222  23679999999998875    35889999999999998532   1        1122343222 22   235


Q ss_pred             ccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          278 TRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++|+|++|+|++++.+++++.  +.+|||++   ++++|+.|+++.+.+++|+
T Consensus       224 rd~i~V~D~a~a~~~~~~~~~--~~~yni~~---g~~~s~~e~~~~i~~~~g~  271 (343)
T TIGR01472       224 RDWGHAKDYVEAMWLMLQQDK--PDDYVIAT---GETHSVREFVEVSFEYIGK  271 (343)
T ss_pred             cCceeHHHHHHHHHHHHhcCC--CccEEecC---CCceeHHHHHHHHHHHcCC
Confidence            899999999999999998653  35899999   8999999999999998873

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.97  E-value=2.3e-29  Score=249.63  Aligned_cols=232  Identities=14%  Similarity=0.171  Sum_probs=175.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCccc-HHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNS-IIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~-~~~~l~~~d~Vi~~ag~  157 (331)
                      .+|+||||||+||||++|+++|+++. ||+|++++|.......+.  .+++++.+|++|.+. +.++++++|+|||+|+.
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~  392 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDD-NYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI  392 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCC-CcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence            47889999999999999999999852 799999999875543322  358899999998765 57788999999999986


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC--------CCCCC---CCC--
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN--------LNHPL---NSL--  224 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~--------~~~~~---~~~--  224 (331)
                      ....      ....+|+..+       ++|+.++.+++++|++++ ++|||+||..++.        |+.+.   .+.  
T Consensus       393 ~~~~------~~~~~~~~~~-------~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~  458 (660)
T PRK08125        393 ATPI------EYTRNPLRVF-------ELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINK  458 (660)
T ss_pred             cCch------hhccCHHHHH-------HhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCC
Confidence            4321      1123344444       889999999999999998 8999999985432        11111   111  


Q ss_pred             CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------------hhhhhccCCccccC---Cccccc
Q 046297          225 GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------------IRELLVGKDDELLQ---TETRTI  281 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------------~~~~~~~~~~~~~~---~~~~~i  281 (331)
                      +.+.|+.+|..+|++++    +++++++++||+++||+...                +.....+....+.+   ..++++
T Consensus       459 p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i  538 (660)
T PRK08125        459 QRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFT  538 (660)
T ss_pred             CccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeecee
Confidence            22469999999998885    46899999999999998632                12222344433332   348899


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEeccCCCCC-CCCHHHHHHHHHHhhcc
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLASKPEGT-GTPTKDFKALFSQITTR  330 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~-~~t~~e~~~~~~~~~g~  330 (331)
                      |++|+|++++.+++++.  ..+++||+++   ++ .+++.|+++.+.+..|+
T Consensus       539 ~v~Dva~a~~~~l~~~~~~~~g~iyni~~---~~~~~s~~el~~~i~~~~g~  587 (660)
T PRK08125        539 DIRDGIEALFRIIENKDNRCDGQIINIGN---PDNEASIRELAEMLLASFEK  587 (660)
T ss_pred             eHHHHHHHHHHHHhccccccCCeEEEcCC---CCCceeHHHHHHHHHHHhcc
Confidence            99999999999998753  3478999998   75 79999999999998873

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=4.3e-29  Score=229.46  Aligned_cols=230  Identities=19%  Similarity=0.199  Sum_probs=168.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh------hcC--CCCcEEEccCCCcccHHHHhcCCCE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ------KIG--GADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~------~l~--~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      .+.+++||||||+||||++|+++|+++  |++|+++.|+.....      .+.  +.++++.+|++|.+.+.++++++|+
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   83 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDL   83 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCE
Confidence            344688999999999999999999999  999999998864322      122  2478899999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCCCCC------CC--
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTNLNH------PL--  221 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~~~~------~~--  221 (331)
                      |||+|+....        ...+|..      ...++|+.++.++++++++. ++++||++||..++....      +.  
T Consensus        84 vih~A~~~~~--------~~~~~~~------~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         84 VFHVATPVNF--------ASEDPEN------DMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             EEEeCCCCcc--------CCCChHH------HHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceecc
Confidence            9999985211        1112221      12378999999999999886 589999999986542110      00  


Q ss_pred             -----------CCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch---------hhhhccCCcccc---
Q 046297          222 -----------NSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI---------RELLVGKDDELL---  274 (331)
Q Consensus       222 -----------~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~---------~~~~~~~~~~~~---  274 (331)
                                 ...+.++|+.+|..+|.+++    +++++++++||+++|||....         ...+.+....+.   
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~  229 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLK  229 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcccccccc
Confidence                       01123579999999997765    468999999999999996421         112223222111   


Q ss_pred             -----CCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          275 -----QTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       275 -----~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                           .+.++++|++|+|++++.+++.+... ..|+ ++   +...++.|+++.+.+..+
T Consensus       230 ~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~-~~~~-~~---~~~~s~~el~~~i~~~~~  284 (338)
T PLN00198        230 GMQMLSGSISITHVEDVCRAHIFLAEKESAS-GRYI-CC---AANTSVPELAKFLIKRYP  284 (338)
T ss_pred             ccccccCCcceeEHHHHHHHHHHHhhCcCcC-CcEE-Ee---cCCCCHHHHHHHHHHHCC
Confidence                 12368999999999999999876443 3674 54   567899999999988765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.97  E-value=4e-29  Score=248.92  Aligned_cols=233  Identities=16%  Similarity=0.154  Sum_probs=175.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC--chhhhc-----CCCCcEEEccCCCcccHHHHh--cCCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE--ESKQKI-----GGADDLFIGDIRDSNSIIPAI--QGIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~--~~~~~l-----~~~~~~v~~Dl~d~~~~~~~l--~~~d~V  151 (331)
                      +.|+||||||+||||++|+++|++++++++|++++|..  +....+     ..+++++.+|+.|.+.+..++  .++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            35789999999999999999999985578999998853  111111     235889999999998887766  589999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCCCC---------C
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLNHP---------L  221 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~~~---------~  221 (331)
                      ||+|+.....      ....++...+       ++|+.++.+++++|++.+ +++||++||..++.....         .
T Consensus        85 iHlAa~~~~~------~~~~~~~~~~-------~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~  151 (668)
T PLN02260         85 MHFAAQTHVD------NSFGNSFEFT-------KNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEAS  151 (668)
T ss_pred             EECCCccCch------hhhhCHHHHH-------HHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccC
Confidence            9999974321      1122333333       789999999999999987 899999999865432111         0


Q ss_pred             CCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch--------hhhhccCCccccC---CcccccCHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI--------RELLVGKDDELLQ---TETRTIARADV  286 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~--------~~~~~~~~~~~~~---~~~~~i~v~Dv  286 (331)
                      ...+.+.|+.+|..+|.+++    +++++++++||+++||+....        .....+....+.+   ..++++|++|+
T Consensus       152 ~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dv  231 (668)
T PLN02260        152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDV  231 (668)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHH
Confidence            11123679999999998876    368999999999999987531        1222344444433   23789999999


Q ss_pred             HHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          287 AEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       287 a~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++++.+++... .+++||+++   ++.+++.|+++.+.+.+|+
T Consensus       232 a~a~~~~l~~~~-~~~vyni~~---~~~~s~~el~~~i~~~~g~  271 (668)
T PLN02260        232 AEAFEVVLHKGE-VGHVYNIGT---KKERRVIDVAKDICKLFGL  271 (668)
T ss_pred             HHHHHHHHhcCC-CCCEEEECC---CCeeEHHHHHHHHHHHhCC
Confidence            999999987653 467999999   8899999999999998874

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=4.7e-29  Score=226.45  Aligned_cols=227  Identities=23%  Similarity=0.295  Sum_probs=175.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCC-CEEEEcccCCCCCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGI-DALIILTSAVPKMK  162 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~-d~Vi~~ag~~~~~~  162 (331)
                      +||||||+||||++|+++|+++  ||+|++++|...+.......+.++.+|+.|.+.+.++++++ |+|||+|+......
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~   79 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD   79 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence            4999999999999999999999  99999999987665444356899999999998888888888 99999999755432


Q ss_pred             CCCCCCCCC-CCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC--------CCCCCcchHHHHH
Q 046297          163 PDFDPAKGG-RPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP--------LNSLGNGNILVWK  233 (331)
Q Consensus       163 ~~~~~~~~~-~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~--------~~~~~~~~y~~sK  233 (331)
                      .      .. +|..++       ++|+.++.+++++|++.++++|||.||.+++....+        .+..+.+.|+.+|
T Consensus        80 ~------~~~~~~~~~-------~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK  146 (314)
T COG0451          80 S------NASDPAEFL-------DVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSK  146 (314)
T ss_pred             h------hhhCHHHHH-------HHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHH
Confidence            1      11 233344       889999999999999999999999777653221100        1111223799999


Q ss_pred             HHHHHHHHh----cCCCEEEEecCcccCCCcchh-------h----hhccCC-cccc---CCcccccCHHHHHHHHHHHh
Q 046297          234 RKAEQYLAD----SGIPYTIIRAGGLQDKEGGIR-------E----LLVGKD-DELL---QTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       234 ~~~e~~~~~----~~~~~~ilrp~~v~g~~~~~~-------~----~~~~~~-~~~~---~~~~~~i~v~Dva~~~~~~l  294 (331)
                      ..+|++++.    .+++++++||+++||+.....       .    ...+.. ..+.   ...++++|++|++++++.++
T Consensus       147 ~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  226 (314)
T COG0451         147 LAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL  226 (314)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHH
Confidence            999998874    469999999999999875321       1    222333 2222   22257899999999999999


Q ss_pred             cCcccCCceEEeccCCCCC-CCCHHHHHHHHHHhhcc
Q 046297          295 QFEEAKFKAFDLASKPEGT-GTPTKDFKALFSQITTR  330 (331)
Q Consensus       295 ~~~~~~~~~~~i~~~~~~~-~~t~~e~~~~~~~~~g~  330 (331)
                      +++...  .||+++   ++ ..++.|+++.+.+.+|.
T Consensus       227 ~~~~~~--~~ni~~---~~~~~~~~e~~~~~~~~~~~  258 (314)
T COG0451         227 ENPDGG--VFNIGS---GTAEITVRELAEAVAEAVGS  258 (314)
T ss_pred             hCCCCc--EEEeCC---CCCcEEHHHHHHHHHHHhCC
Confidence            987654  999998   76 89999999999998774

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=7.9e-29  Score=228.69  Aligned_cols=230  Identities=20%  Similarity=0.145  Sum_probs=172.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c--CCCCcEEEccCCCcccHHHHhcC--CCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I--GGADDLFIGDIRDSNSIIPAIQG--IDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l--~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~  153 (331)
                      +|+||||||+||||+++++.|+++  |++|++++|+......    +  ..++.++.+|++|.+++.+++++  +|+|||
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih   81 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH   81 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence            578999999999999999999999  9999999998654321    1  23477899999999999999984  699999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCC---------CCCCCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNL---------NHPLNS  223 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~---------~~~~~~  223 (331)
                      +|+....      .....+|...+       ++|+.++.+++++|++.+ +++||++||..++..         +.+.. 
T Consensus        82 ~A~~~~~------~~~~~~~~~~~-------~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~-  147 (349)
T TIGR02622        82 LAAQPLV------RKSYADPLETF-------ETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG-  147 (349)
T ss_pred             CCccccc------ccchhCHHHHH-------HHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCC-
Confidence            9985322      22234455554       889999999999999877 889999999755432         11222 


Q ss_pred             CCcchHHHHHHHHHHHHHh-----------cCCCEEEEecCcccCCCcc---------hhhhhccCCcccc--CCccccc
Q 046297          224 LGNGNILVWKRKAEQYLAD-----------SGIPYTIIRAGGLQDKEGG---------IRELLVGKDDELL--QTETRTI  281 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~~-----------~~~~~~ilrp~~v~g~~~~---------~~~~~~~~~~~~~--~~~~~~i  281 (331)
                       +.+.|+.+|..+|.+++.           .+++++++||+++||+...         ......+....+.  ...++|+
T Consensus       148 -p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i  226 (349)
T TIGR02622       148 -GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQ  226 (349)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCccccee
Confidence             236799999999988763           2899999999999998641         1222334444443  2458999


Q ss_pred             CHHHHHHHHHHHhcCc----ccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          282 ARADVAEVCIQALQFE----EAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~----~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      |++|+|++++.+++..    ...+++|||++.. ++++++.|+++.+.+..+
T Consensus       227 ~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~-~~~~s~~~~~~~i~~~~~  277 (349)
T TIGR02622       227 HVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRA-SDNARVVELVVDALEFWW  277 (349)
T ss_pred             eHHHHHHHHHHHHHHHhhcCccccceeeeCCCc-ccCcCHHHHHHHHHHHhc
Confidence            9999999999887642    1235799999711 268999999998877654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=4.9e-29  Score=234.97  Aligned_cols=223  Identities=15%  Similarity=0.139  Sum_probs=166.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----hhhc--CCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----KQKI--GGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----~~~l--~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      .|+||||||+||||++|++.|+++  |++|++++|....    ...+  ...++++.+|+.+.     .+.++|+|||+|
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA  192 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA  192 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence            578999999999999999999999  9999999985321    1111  12467888888654     356899999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC--CCC--------CC-C
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN--HPL--------NS-L  224 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~--~~~--------~~-~  224 (331)
                      +......      ...+|...+       ++|+.++.+++++|+++++ +||++||..++...  .+.        .+ .
T Consensus       193 a~~~~~~------~~~~p~~~~-------~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~  258 (436)
T PLN02166        193 CPASPVH------YKYNPVKTI-------KTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  258 (436)
T ss_pred             eeccchh------hccCHHHHH-------HHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCC
Confidence            8633211      112344444       8899999999999999986 89999998654321  111        11 1


Q ss_pred             CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------hhhhhccCCccccCC---cccccCHHHHH
Q 046297          225 GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------IRELLVGKDDELLQT---ETRTIARADVA  287 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------~~~~~~~~~~~~~~~---~~~~i~v~Dva  287 (331)
                      ..+.|+.+|..+|++++    +++++++++||+++||+...          ....+.+....+.+.   .++|+|++|++
T Consensus       259 p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva  338 (436)
T PLN02166        259 ERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLV  338 (436)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHH
Confidence            22569999999998775    46899999999999998632          123344555444432   47899999999


Q ss_pred             HHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          288 EVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++.+++.+.  +.+||+++   ++.+|+.|+++.+++.+|+
T Consensus       339 ~ai~~~~~~~~--~giyNIgs---~~~~Si~ela~~I~~~~g~  376 (436)
T PLN02166        339 DGLVALMEGEH--VGPFNLGN---PGEFTMLELAEVVKETIDS  376 (436)
T ss_pred             HHHHHHHhcCC--CceEEeCC---CCcEeHHHHHHHHHHHhCC
Confidence            99999987543  35999999   8999999999999998874

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.97  E-value=7.6e-29  Score=222.62  Aligned_cols=214  Identities=19%  Similarity=0.164  Sum_probs=166.9

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCC--CEEEEcccCCCCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGI--DALIILTSAVPKM  161 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~--d~Vi~~ag~~~~~  161 (331)
                      +||||||+||||++++++|+++  ||+|++++|+              .+|+.|++.+.++++++  |+|||+++.....
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~--------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPE--GRVVVALTSS--------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCc--------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            5899999999999999999999  9999999985              47999999999999865  9999999864321


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC----CCCCcchHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL----NSLGNGNILVWKRK  235 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~----~~~~~~~y~~sK~~  235 (331)
                            ....++...+       ++|+.++.+++++|++.+. +||++||..++....  +.    ...+.+.|+.+|..
T Consensus        65 ------~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~  130 (287)
T TIGR01214        65 ------GAESDPEKAF-------AVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLA  130 (287)
T ss_pred             ------ccccCHHHHH-------HHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHH
Confidence                  0112223333       7899999999999999885 899999986543211  11    11223679999999


Q ss_pred             HHHHHHhcCCCEEEEecCcccCCCc--chh-h----hhccCCccc-cCCcccccCHHHHHHHHHHHhcCcccCCceEEec
Q 046297          236 AEQYLADSGIPYTIIRAGGLQDKEG--GIR-E----LLVGKDDEL-LQTETRTIARADVAEVCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       236 ~e~~~~~~~~~~~ilrp~~v~g~~~--~~~-~----~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~  307 (331)
                      +|++++..+.+++++||+++||+..  .+. .    ...+....+ .+..+++++++|+|++++.+++.+...+++||++
T Consensus       131 ~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~  210 (287)
T TIGR01214       131 GEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLA  210 (287)
T ss_pred             HHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEE
Confidence            9999999899999999999999874  211 1    112222222 2345788999999999999998765556799999


Q ss_pred             cCCCCCCCCHHHHHHHHHHhhcc
Q 046297          308 SKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       308 ~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +   ++.+++.|+++.+.+.+|+
T Consensus       211 ~---~~~~s~~e~~~~i~~~~~~  230 (287)
T TIGR01214       211 N---SGQCSWYEFAQAIFEEAGA  230 (287)
T ss_pred             C---CCCcCHHHHHHHHHHHhCc
Confidence            9   8999999999999998874

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.97  E-value=6.3e-29  Score=224.39  Aligned_cols=214  Identities=15%  Similarity=0.112  Sum_probs=160.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~  160 (331)
                      |+||||||+||||++|+++|+++  | +|++++|...          .+.+|++|.+.+.++++  ++|+|||+|+....
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~--g-~V~~~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPL--G-NLIALDVHST----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhcc--C-CEEEeccccc----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            57999999999999999999999  8 6999988632          34689999999999998  58999999997543


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCCCCcchHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNSLGNGNILVW  232 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~~~~~~y~~s  232 (331)
                      .      ....+|+..+       .+|+.++.+++++|++.|+ +||++||..++..        +.+..  +.+.|+.+
T Consensus        68 ~------~~~~~~~~~~-------~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~--P~~~Yg~s  131 (299)
T PRK09987         68 D------KAESEPEFAQ-------LLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATA--PLNVYGET  131 (299)
T ss_pred             c------hhhcCHHHHH-------HHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCC--CCCHHHHH
Confidence            1      1223444444       7899999999999999996 7999999865422        22222  23679999


Q ss_pred             HHHHHHHHHhcCCCEEEEecCcccCCCcc-h----hhh-hccCCccccCCc-----ccccCHHHHHHHHHHHhcCcccCC
Q 046297          233 KRKAEQYLADSGIPYTIIRAGGLQDKEGG-I----REL-LVGKDDELLQTE-----TRTIARADVAEVCIQALQFEEAKF  301 (331)
Q Consensus       233 K~~~e~~~~~~~~~~~ilrp~~v~g~~~~-~----~~~-~~~~~~~~~~~~-----~~~i~v~Dva~~~~~~l~~~~~~~  301 (331)
                      |..+|++++.+..+++++||+++||+... +    .+. ..+....+.+..     +.+...+|+++++..++..+.. +
T Consensus       132 K~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~  210 (299)
T PRK09987        132 KLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-A  210 (299)
T ss_pred             HHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-C
Confidence            99999999988889999999999998642 2    112 223344444331     1234456677777777765433 3


Q ss_pred             ceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          302 KAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       302 ~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      .+||+++   ++..|+.|+++.+.++++
T Consensus       211 giyni~~---~~~~s~~e~~~~i~~~~~  235 (299)
T PRK09987        211 GLYHLVA---SGTTTWHDYAALVFEEAR  235 (299)
T ss_pred             CeEEeeC---CCCccHHHHHHHHHHHHH
Confidence            5999999   899999999999877643

>PLN02583 cinnamoyl-CoA reductase

Probab=99.97  E-value=2.1e-28  Score=220.81  Aligned_cols=229  Identities=17%  Similarity=0.130  Sum_probs=168.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh------hhc---CCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK------QKI---GGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~------~~l---~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      .+++||||||+||||++++++|+++  ||+|++++|+.++.      ..+   ..+++++.+|++|.+.+.+++.++|.|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v   82 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGL   82 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEE
Confidence            3578999999999999999999999  99999999964321      222   224788999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCC--C-CCC----CCCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGT--N-LNH----PLNS  223 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~--~-~~~----~~~~  223 (331)
                      +|.++.....        ..+++.       ..++|+.++.+++++|++. ++++||++||..+.  . +..    +...
T Consensus        83 ~~~~~~~~~~--------~~~~~~-------~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E  147 (297)
T PLN02583         83 FCCFDPPSDY--------PSYDEK-------MVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDE  147 (297)
T ss_pred             EEeCccCCcc--------cccHHH-------HHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCc
Confidence            9987642110        011222       3488999999999999886 68999999997542  1 110    1110


Q ss_pred             C---Cc-------chHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch-hhhhccCCccccCCcccccCHHHHHH
Q 046297          224 L---GN-------GNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI-RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       224 ~---~~-------~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      .   ..       ..|+.+|..+|+++.    +.++++++|||+++||+.... ...+.+......++.+++||++|+|+
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~  227 (297)
T PLN02583        148 RSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVD  227 (297)
T ss_pred             ccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHH
Confidence            0   00       159999999998774    468999999999999997532 12223332333345578999999999


Q ss_pred             HHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          289 VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++.+++.+...+ .|++.+   +....+.++++++.+....
T Consensus       228 a~~~al~~~~~~~-r~~~~~---~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        228 AHIRAFEDVSSYG-RYLCFN---HIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             HHHHHhcCcccCC-cEEEec---CCCccHHHHHHHHHHhCCC
Confidence            9999999876655 698987   5545567899999886543

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.96  E-value=8.8e-29  Score=233.63  Aligned_cols=223  Identities=16%  Similarity=0.142  Sum_probs=166.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hh----c-CCCCcEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QK----I-GGADDLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~----l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ..|+||||||+||||++|+++|+++  |++|++++|..... +.    + ..+++++.+|+.++     ++.++|+|||+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHl  190 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHL  190 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEe
Confidence            3588999999999999999999999  99999998753211 11    1 13477888888664     35689999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC--CCC--------CCC
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN--HPL--------NSL  224 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~--~~~--------~~~  224 (331)
                      |+......      ...+|...+       ++|+.++.+++++|++.++ +||++||..++...  .+.        ++.
T Consensus       191 Aa~~~~~~------~~~~p~~~~-------~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~  256 (442)
T PLN02206        191 ACPASPVH------YKFNPVKTI-------KTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPI  256 (442)
T ss_pred             eeecchhh------hhcCHHHHH-------HHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCC
Confidence            98643210      112333333       8999999999999999996 89999998654321  111        111


Q ss_pred             -CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------hhhhhccCCccccCC---cccccCHHHH
Q 046297          225 -GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------IRELLVGKDDELLQT---ETRTIARADV  286 (331)
Q Consensus       225 -~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------~~~~~~~~~~~~~~~---~~~~i~v~Dv  286 (331)
                       ..+.|+.+|..+|+++.    +++++++++||+++||+...          ....+.++...+++.   .++++|++|+
T Consensus       257 ~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dv  336 (442)
T PLN02206        257 GVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL  336 (442)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHH
Confidence             13679999999998775    46899999999999998631          122334454444432   4789999999


Q ss_pred             HHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          287 AEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       287 a~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      |++++.+++.+ . +.+||+++   ++.+|+.|+++.+.+.+|
T Consensus       337 a~ai~~a~e~~-~-~g~yNIgs---~~~~sl~Elae~i~~~~g  374 (442)
T PLN02206        337 VEGLMRLMEGE-H-VGPFNLGN---PGEFTMLELAKVVQETID  374 (442)
T ss_pred             HHHHHHHHhcC-C-CceEEEcC---CCceeHHHHHHHHHHHhC
Confidence            99999998765 3 34899999   899999999999999876

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.96  E-value=3.2e-28  Score=222.38  Aligned_cols=226  Identities=26%  Similarity=0.293  Sum_probs=175.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+|+||||+|+||+++++.|+++  |++|++++|++++...+. ..++++.+|+.|.+++.++++++|+|||+++.... 
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~-   77 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRL-   77 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceeccc-
Confidence            47999999999999999999999  999999999876644433 25889999999999999999999999999985321 


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC---------CCCCCCCC-cchHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL---------NHPLNSLG-NGNILV  231 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~---------~~~~~~~~-~~~y~~  231 (331)
                             ...+++..+       ++|+.++.++++++++.++++||++||..++..         +.+..+.. .+.|..
T Consensus        78 -------~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  143 (328)
T TIGR03466        78 -------WAPDPEEMY-------AANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKR  143 (328)
T ss_pred             -------CCCCHHHHH-------HHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHH
Confidence                   112333334       789999999999999999999999999765432         11111111 246999


Q ss_pred             HHHHHHHHHHh----cCCCEEEEecCcccCCCcch--------hhhhccCCccccCCcccccCHHHHHHHHHHHhcCccc
Q 046297          232 WKRKAEQYLAD----SGIPYTIIRAGGLQDKEGGI--------RELLVGKDDELLQTETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       232 sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                      +|..+|+++++    ++++++++||+++||+....        .....+......+.+.+++|++|+|++++.+++++. 
T Consensus       144 sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-  222 (328)
T TIGR03466       144 SKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGR-  222 (328)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCC-
Confidence            99999988764    58999999999999987431        112222222333556789999999999999998754 


Q ss_pred             CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          300 KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       300 ~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .++.|+++    ++.+++.|+++.+.+++|+
T Consensus       223 ~~~~~~~~----~~~~s~~e~~~~i~~~~g~  249 (328)
T TIGR03466       223 IGERYILG----GENLTLKQILDKLAEITGR  249 (328)
T ss_pred             CCceEEec----CCCcCHHHHHHHHHHHhCC
Confidence            46788885    5779999999999998874

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.96  E-value=1.6e-28  Score=224.22  Aligned_cols=222  Identities=19%  Similarity=0.253  Sum_probs=169.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC-CCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG-GADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ++++||||||+||||+++++.|++++.+++|++++|+..+...    +. .++.++.+|++|++.+.++++++|+|||+|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            3578999999999999999999998223899999997654322    11 347889999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHH
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRK  235 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~  235 (331)
                      |....      +....+|+..+       ++|+.++.+++++|++.++++||++||.....   |     .+.|+.+|..
T Consensus        83 g~~~~------~~~~~~~~~~~-------~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~---p-----~~~Y~~sK~~  141 (324)
T TIGR03589        83 ALKQV------PAAEYNPFECI-------RTNINGAQNVIDAAIDNGVKRVVALSTDKAAN---P-----INLYGATKLA  141 (324)
T ss_pred             ccCCC------chhhcCHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC---C-----CCHHHHHHHH
Confidence            96432      11122333444       89999999999999999999999999965432   1     2469999999


Q ss_pred             HHHHHH-------hcCCCEEEEecCcccCCCcchhhh----h-ccC-CccccC--CcccccCHHHHHHHHHHHhcCcccC
Q 046297          236 AEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL----L-VGK-DDELLQ--TETRTIARADVAEVCIQALQFEEAK  300 (331)
Q Consensus       236 ~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~----~-~~~-~~~~~~--~~~~~i~v~Dva~~~~~~l~~~~~~  300 (331)
                      +|.+++       +.+++++++|||++||+.+.+...    . .+. ...+.+  ..++|+|++|++++++.+++.. ..
T Consensus       142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-~~  220 (324)
T TIGR03589       142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-LG  220 (324)
T ss_pred             HHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-CC
Confidence            998774       368999999999999987543222    2 232 223322  3367899999999999999864 34


Q ss_pred             CceEEeccCCCCCCCCHHHHHHHHHHhh
Q 046297          301 FKAFDLASKPEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       301 ~~~~~i~~~~~~~~~t~~e~~~~~~~~~  328 (331)
                      +++|+ ..   +..+++.|+++.+.+..
T Consensus       221 ~~~~~-~~---~~~~sv~el~~~i~~~~  244 (324)
T TIGR03589       221 GEIFV-PK---IPSMKITDLAEAMAPEC  244 (324)
T ss_pred             CCEEc-cC---CCcEEHHHHHHHHHhhC
Confidence            57784 55   56799999999988753

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.96  E-value=4.5e-28  Score=223.91  Aligned_cols=227  Identities=12%  Similarity=0.100  Sum_probs=168.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCC--ch---hhhc--CCCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTE--ES---KQKI--GGADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~--~~---~~~l--~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      |+||||||+||||++|+++|+++  |+. |++++|..  ..   ...+  ...++++.+|++|.+++.++++  ++|+||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINN--TQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVM   78 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHh--CCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence            47999999999999999999999  875 55555532  11   1112  1246789999999999999997  489999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---------CCCeEEEEccCCCCCC------
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---------GAKQIVLVGSMGGTNL------  217 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---------~vk~~v~~SS~~~~~~------  217 (331)
                      |+|+.....      ....+++..+       ++|+.++.+++++|++.         ++++||++||..++..      
T Consensus        79 h~A~~~~~~------~~~~~~~~~~-------~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (352)
T PRK10084         79 HLAAESHVD------RSITGPAAFI-------ETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE  145 (352)
T ss_pred             ECCcccCCc------chhcCchhhh-------hhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence            999864321      1122344444       99999999999999874         4679999999754331      


Q ss_pred             ------------CCCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc--------hhhhhccCCccc
Q 046297          218 ------------NHPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDEL  273 (331)
Q Consensus       218 ------------~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~  273 (331)
                                  +.+.  .+.+.|+.+|..+|.+++    .++++++++|++.+||+...        ......+....+
T Consensus       146 ~~~~~~~~~~~E~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~  223 (352)
T PRK10084        146 VENSEELPLFTETTAY--APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI  223 (352)
T ss_pred             ccccccCCCccccCCC--CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEE
Confidence                        1111  223679999999998775    46899999999999998742        122233433333


Q ss_pred             c---CCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          274 L---QTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       274 ~---~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .   ...++++|++|+|++++.+++.+. .+++||+++   ++..++.|+++.+.+.+|+
T Consensus       224 ~~~g~~~~~~v~v~D~a~a~~~~l~~~~-~~~~yni~~---~~~~s~~~~~~~i~~~~~~  279 (352)
T PRK10084        224 YGKGDQIRDWLYVEDHARALYKVVTEGK-AGETYNIGG---HNEKKNLDVVLTICDLLDE  279 (352)
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCceEEeCC---CCcCcHHHHHHHHHHHhcc
Confidence            3   235889999999999999988653 467999999   8899999999999988874

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=4.9e-28  Score=223.76  Aligned_cols=236  Identities=17%  Similarity=0.182  Sum_probs=168.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ..|+||||||+||||++++++|+++  |++|++++|+.++...+      ...++++.+|+.|.+.+.++++++|+|||+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            3678999999999999999999999  99999999986543321      134778999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCC-------CCC-----
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLN-------HPL-----  221 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~-------~~~-----  221 (331)
                      |+......    +....+|+.++  ....++.|+.++.+++++|++.+ +++||++||..++...       .+.     
T Consensus        87 A~~~~~~~----~~~~~~~~~~~--~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~  160 (353)
T PLN02896         87 AASMEFDV----SSDHNNIEEYV--QSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQ  160 (353)
T ss_pred             CccccCCc----cccccchhhhh--hHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccC
Confidence            99743211    00112333322  01122445689999999998875 8999999997554211       000     


Q ss_pred             CC--------CCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc------hhhh---hccCCcccc-----C
Q 046297          222 NS--------LGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG------IREL---LVGKDDELL-----Q  275 (331)
Q Consensus       222 ~~--------~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~------~~~~---~~~~~~~~~-----~  275 (331)
                      .+        ...+.|+.+|..+|+++.    +++++++++||+++|||...      ....   +.+.....+     +
T Consensus       161 ~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  240 (353)
T PLN02896        161 TPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVN  240 (353)
T ss_pred             CcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccc
Confidence            01        011479999999998764    46899999999999999642      1111   123222111     0


Q ss_pred             ---CcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          276 ---TETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       276 ---~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                         ..++|+|++|+|++++.+++.+... ..|++ +   ++.+++.|+++.+.+..+
T Consensus       241 ~~~~~~dfi~v~Dva~a~~~~l~~~~~~-~~~~~-~---~~~~s~~el~~~i~~~~~  292 (353)
T PLN02896        241 SRMGSIALVHIEDICDAHIFLMEQTKAE-GRYIC-C---VDSYDMSELINHLSKEYP  292 (353)
T ss_pred             cccCceeEEeHHHHHHHHHHHHhCCCcC-ccEEe-c---CCCCCHHHHHHHHHHhCC
Confidence               1258999999999999999875443 36865 4   678999999999998765

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.96  E-value=3.7e-28  Score=223.19  Aligned_cols=229  Identities=21%  Similarity=0.240  Sum_probs=169.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh-------hc-CCCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-------KI-GGADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-------~l-~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      |+||||||+||||++|++.|+++  |++|++++|......       .+ ..++.++.+|+.|++.+.++++  ++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv   78 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI   78 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence            57999999999999999999999  999999886532211       11 1246788999999999998886  699999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC--------CCCCCCCC
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN--------LNHPLNSL  224 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~--------~~~~~~~~  224 (331)
                      |+|+.....      ....++...       .++|+.++.+++++|++.++++||++||..++.        |..+. ..
T Consensus        79 h~a~~~~~~------~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~-~~  144 (338)
T PRK10675         79 HFAGLKAVG------ESVQKPLEY-------YDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPT-GT  144 (338)
T ss_pred             ECCcccccc------chhhCHHHH-------HHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCC-CC
Confidence            999864321      111223333       378999999999999999999999999986532        12221 01


Q ss_pred             CcchHHHHHHHHHHHHHh-----cCCCEEEEecCcccCCCcc-------------h----hhhhccCCcc--c-------
Q 046297          225 GNGNILVWKRKAEQYLAD-----SGIPYTIIRAGGLQDKEGG-------------I----RELLVGKDDE--L-------  273 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~~-----~~~~~~ilrp~~v~g~~~~-------------~----~~~~~~~~~~--~-------  273 (331)
                      +.+.|+.+|..+|++++.     .+++++++|++++||+...             +    .....+....  +       
T Consensus       145 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        145 PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             CCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            236799999999988863     3789999999988886310             1    1122222211  1       


Q ss_pred             cC--CcccccCHHHHHHHHHHHhcCc--ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          274 LQ--TETRTIARADVAEVCIQALQFE--EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       274 ~~--~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .+  ..++++|++|+|++++.+++..  ...+++||+++   ++.+++.|+++++.+..|+
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  282 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGA---GVGSSVLDVVNAFSKACGK  282 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecC---CCceeHHHHHHHHHHHhCC
Confidence            11  2378999999999999998752  23357999999   8999999999999998874

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=4e-28  Score=220.54  Aligned_cols=228  Identities=14%  Similarity=0.136  Sum_probs=170.5

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-----chhhhcC--CCCcEEEccCCCcccHHHHhcC--CCEEEEc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-----ESKQKIG--GADDLFIGDIRDSNSIIPAIQG--IDALIIL  154 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-----~~~~~l~--~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~  154 (331)
                      +||||||||+||++++++|+++++.++|++++|..     +....+.  ..++++.+|++|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            48999999999999999999982237899988642     1122222  2578899999999999999987  9999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCCC---------CCCCCCCC
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGTN---------LNHPLNSL  224 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~~---------~~~~~~~~  224 (331)
                      |+.....      ....+++..       .++|+.++.+++++|++.+.+ ++|++||..++.         +..+..  
T Consensus        81 a~~~~~~------~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~--  145 (317)
T TIGR01181        81 AAESHVD------RSISGPAAF-------IETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLA--  145 (317)
T ss_pred             ccccCch------hhhhCHHHH-------HHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCC--
Confidence            9864321      111223333       388999999999999987554 899999975432         111221  


Q ss_pred             CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc--------hhhhhccCCccccC---CcccccCHHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQ---TETRTIARADVAEV  289 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~---~~~~~i~v~Dva~~  289 (331)
                      +.+.|+.+|..+|.+++    +.+++++++||+++||+...        +.....+....+.+   ..++++|++|+|++
T Consensus       146 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~  225 (317)
T TIGR01181       146 PSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRA  225 (317)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHH
Confidence            22569999999998765    46899999999999998642        12233344433332   34789999999999


Q ss_pred             HHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          290 CIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       290 ~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +..+++++ ..+++||+++   ++.+++.|+++++.++.|+
T Consensus       226 ~~~~~~~~-~~~~~~~~~~---~~~~s~~~~~~~i~~~~~~  262 (317)
T TIGR01181       226 IYLVLEKG-RVGETYNIGG---GNERTNLEVVETILELLGK  262 (317)
T ss_pred             HHHHHcCC-CCCceEEeCC---CCceeHHHHHHHHHHHhCC
Confidence            99999765 4467999999   8899999999999998874

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=4.9e-28  Score=223.62  Aligned_cols=231  Identities=20%  Similarity=0.281  Sum_probs=172.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-------hh----cCCCCcEEEccCCCcccHHHHhc--
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-------QK----IGGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-------~~----l~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      +.+++||||||+||||++|+++|+++  |++|++++|.....       ..    ...++.++.+|+.|++.+.++++  
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            44678999999999999999999999  99999998753211       11    12347899999999999999886  


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC--------CC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN--------LN  218 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~--------~~  218 (331)
                      ++|+|||+|+....      .....+|...+       +.|+.++.+++++|++.++++||++||.+++.        |+
T Consensus        81 ~~d~vih~a~~~~~------~~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~  147 (352)
T PLN02240         81 RFDAVIHFAGLKAV------GESVAKPLLYY-------DNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE  147 (352)
T ss_pred             CCCEEEEccccCCc------cccccCHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC
Confidence            68999999986422      11122334444       88999999999999999999999999975432        22


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHh-----cCCCEEEEecCcccCCCcc-----------------hhhhhccCCcc--cc
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLAD-----SGIPYTIIRAGGLQDKEGG-----------------IRELLVGKDDE--LL  274 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~~-----~~~~~~ilrp~~v~g~~~~-----------------~~~~~~~~~~~--~~  274 (331)
                      .+..+  .+.|+.+|..+|++++.     .+++++++|++++||+...                 +..+..++...  +.
T Consensus       148 ~~~~~--~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PLN02240        148 FPLSA--TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVF  225 (352)
T ss_pred             CCCCC--CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEe
Confidence            22222  36799999999998762     4688999999999986321                 11122232221  11


Q ss_pred             ---------CCcccccCHHHHHHHHHHHhcC----cccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          275 ---------QTETRTIARADVAEVCIQALQF----EEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       275 ---------~~~~~~i~v~Dva~~~~~~l~~----~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                               ...++++|++|+|++++.+++.    +...+++||+++   ++++|+.|+++.+.+++|+
T Consensus       226 g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~---~~~~s~~el~~~i~~~~g~  291 (352)
T PLN02240        226 GNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT---GKGTSVLEMVAAFEKASGK  291 (352)
T ss_pred             CCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccC---CCcEeHHHHHHHHHHHhCC
Confidence                     2237899999999999988864    234458999999   8999999999999998874

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=5.8e-28  Score=222.17  Aligned_cols=227  Identities=18%  Similarity=0.186  Sum_probs=172.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-----hhhc-------CCCCcEEEccCCCcccHHHHhcC-
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-----KQKI-------GGADDLFIGDIRDSNSIIPAIQG-  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~l-------~~~~~~v~~Dl~d~~~~~~~l~~-  147 (331)
                      ++++||||||+||||++++++|+++  |++|++++|+.+.     .+.+       ...+.++.+|++|.+.+.+++++ 
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            4678999999999999999999999  9999999987542     2222       12478999999999999998874 


Q ss_pred             -CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-----eEEEEccCCCCC-----
Q 046297          148 -IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-----QIVLVGSMGGTN-----  216 (331)
Q Consensus       148 -~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-----~~v~~SS~~~~~-----  216 (331)
                       +|+|||+|+.....      ....+|+..+       ++|+.++.+++++|++.+++     +||++||..++.     
T Consensus        83 ~~d~Vih~A~~~~~~------~~~~~~~~~~-------~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~  149 (340)
T PLN02653         83 KPDEVYNLAAQSHVA------VSFEMPDYTA-------DVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPP  149 (340)
T ss_pred             CCCEEEECCcccchh------hhhhChhHHH-------HHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCC
Confidence             69999999964321      1122333333       78999999999999998875     899999874332     


Q ss_pred             --CCCCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch-----------hhhhccCCcccc-C---
Q 046297          217 --LNHPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI-----------RELLVGKDDELL-Q---  275 (331)
Q Consensus       217 --~~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~-----------~~~~~~~~~~~~-~---  275 (331)
                        ++.+..  +.+.|+.+|..+|.+++    +++++++..|+.++|||....           ..+..+....+. +   
T Consensus       150 ~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  227 (340)
T PLN02653        150 QSETTPFH--PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLD  227 (340)
T ss_pred             CCCCCCCC--CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCc
Confidence              222222  23679999999998875    468888899999999985321           111234333332 2   


Q ss_pred             CcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          276 TETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       276 ~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ..++++|++|+|++++.+++.+.  ++.||+++   ++++++.|+++.+.+++|
T Consensus       228 ~~rd~i~v~D~a~a~~~~~~~~~--~~~yni~~---g~~~s~~e~~~~i~~~~g  276 (340)
T PLN02653        228 ASRDWGFAGDYVEAMWLMLQQEK--PDDYVVAT---EESHTVEEFLEEAFGYVG  276 (340)
T ss_pred             ceecceeHHHHHHHHHHHHhcCC--CCcEEecC---CCceeHHHHHHHHHHHcC
Confidence            34899999999999999998753  45899999   899999999999999887

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.96  E-value=3.5e-28  Score=206.25  Aligned_cols=222  Identities=17%  Similarity=0.187  Sum_probs=174.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhc-----CCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKI-----GGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l-----~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      .++|+||||.||||+|||++|..+  ||+|++++.--... +.+     ....+.+..|+     +.+++.++|.|+|+|
T Consensus        27 ~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv-----~~pl~~evD~IyhLA   99 (350)
T KOG1429|consen   27 NLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFTGRKENLEHWIGHPNFELIRHDV-----VEPLLKEVDQIYHLA   99 (350)
T ss_pred             CcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccccchhhcchhccCcceeEEEeec-----hhHHHHHhhhhhhhc
Confidence            588999999999999999999999  99999999753322 222     12356666665     455888999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--CCCC--------CCCC
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--NHPL--------NSLG  225 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--~~~~--------~~~~  225 (331)
                      ++.+.             ..|..++.++...|+.++.+++..|++.+ +||++.||+.+|..  .+|.        ++.+
T Consensus       100 apasp-------------~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpig  165 (350)
T KOG1429|consen  100 APASP-------------PHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIG  165 (350)
T ss_pred             cCCCC-------------cccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCC
Confidence            97544             44555666677999999999999999998 79999999865432  2222        1111


Q ss_pred             -cchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------hhhhhccCCccccCCc---ccccCHHHHH
Q 046297          226 -NGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------IRELLVGKDDELLQTE---TRTIARADVA  287 (331)
Q Consensus       226 -~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------~~~~~~~~~~~~~~~~---~~~i~v~Dva  287 (331)
                       ...|...|+.+|.++.    +.|+++.|.|++++|||...          ..+.+.+.+..+++++   ++|++++|++
T Consensus       166 pr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~V  245 (350)
T KOG1429|consen  166 PRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLV  245 (350)
T ss_pred             chhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHH
Confidence             1679999999998775    56899999999999999865          3455667777777654   7899999999


Q ss_pred             HHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          288 EVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ++++.+++++...  .|||++   ++.+|+.|+++++.++.+
T Consensus       246 egll~Lm~s~~~~--pvNiGn---p~e~Tm~elAemv~~~~~  282 (350)
T KOG1429|consen  246 EGLLRLMESDYRG--PVNIGN---PGEFTMLELAEMVKELIG  282 (350)
T ss_pred             HHHHHHhcCCCcC--CcccCC---ccceeHHHHHHHHHHHcC
Confidence            9999999988543  499999   889999999999998764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.96  E-value=4.4e-28  Score=219.94  Aligned_cols=220  Identities=14%  Similarity=0.099  Sum_probs=157.3

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcc---c-HHHHhc-----CCCEEEEcc
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSN---S-IIPAIQ-----GIDALIILT  155 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~---~-~~~~l~-----~~d~Vi~~a  155 (331)
                      ||||||+||||++|+++|+++  |++++++.|+.......   ..++.+|+.|..   + +.++++     ++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKF---VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchHH---HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            899999999999999999999  99888777764322111   123345665543   3 233332     689999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC----CCCCcchH
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL----NSLGNGNI  229 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~----~~~~~~~y  229 (331)
                      +.....       . .+++..       .+.|+.++.+++++|++.++ +||++||.+++....  +.    ...+.+.|
T Consensus        77 ~~~~~~-------~-~~~~~~-------~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  140 (308)
T PRK11150         77 ACSSTT-------E-WDGKYM-------MDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVY  140 (308)
T ss_pred             eecCCc-------C-CChHHH-------HHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHH
Confidence            853221       0 122222       38899999999999999987 699999986543221  11    11223679


Q ss_pred             HHHHHHHHHHHHh----cCCCEEEEecCcccCCCcch------------hhhhccCCcccc-C---CcccccCHHHHHHH
Q 046297          230 LVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGGI------------RELLVGKDDELL-Q---TETRTIARADVAEV  289 (331)
Q Consensus       230 ~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~~------------~~~~~~~~~~~~-~---~~~~~i~v~Dva~~  289 (331)
                      +.+|..+|+++++    .+++++++||+++||+....            ..+..+....+. +   ..++++|++|+|++
T Consensus       141 ~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a  220 (308)
T PRK11150        141 GYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAV  220 (308)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHH
Confidence            9999999987764    58999999999999986421            123334333333 2   24789999999999


Q ss_pred             HHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          290 CIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       290 ~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++.+++.+.  +.+||+++   ++.+++.|+++.+.+..|+
T Consensus       221 ~~~~~~~~~--~~~yni~~---~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        221 NLWFWENGV--SGIFNCGT---GRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             HHHHHhcCC--CCeEEcCC---CCceeHHHHHHHHHHHhCC
Confidence            999887643  45999999   8899999999999998763

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.96  E-value=1.5e-28  Score=214.03  Aligned_cols=208  Identities=24%  Similarity=0.267  Sum_probs=162.3

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--CCCCcEEEccCCCcccHHHHhcCC--CEEEEcccCCCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--GGADDLFIGDIRDSNSIIPAIQGI--DALIILTSAVPK  160 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--~~~~~~v~~Dl~d~~~~~~~l~~~--d~Vi~~ag~~~~  160 (331)
                      ||||||+||||++++++|+++  |++|+.+.|+.......  ..+++++.+|+.|.+.+.++++..  |+|||+|+....
T Consensus         1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSN   78 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSH
T ss_pred             EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccc
Confidence            799999999999999999999  99999999987654332  226899999999999999999854  999999996321


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCC------CCCcchHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLN------SLGNGNILVWKR  234 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~------~~~~~~y~~sK~  234 (331)
                                   ...+.+.....+.|+.++.+++++|++.++++||++||..++....+..      ..+.+.|+.+|.
T Consensus        79 -------------~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~  145 (236)
T PF01370_consen   79 -------------PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKR  145 (236)
T ss_dssp             -------------HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHH
T ss_pred             -------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                         0111222333478999999999999999999999999986544332111      122267999999


Q ss_pred             HHHHHHHh----cCCCEEEEecCcccCCC---cc--------hhhhhccCCccccC---CcccccCHHHHHHHHHHHhcC
Q 046297          235 KAEQYLAD----SGIPYTIIRAGGLQDKE---GG--------IRELLVGKDDELLQ---TETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       235 ~~e~~~~~----~~~~~~ilrp~~v~g~~---~~--------~~~~~~~~~~~~~~---~~~~~i~v~Dva~~~~~~l~~  296 (331)
                      ..|+++++    .+++++++||+.+||+.   ..        ......+++..+++   ..++++|++|+|++++.++++
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  225 (236)
T PF01370_consen  146 AAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALEN  225 (236)
T ss_dssp             HHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhC
Confidence            99988763    58999999999999999   21        23444555555543   348899999999999999999


Q ss_pred             cccCCceEEec
Q 046297          297 EEAKFKAFDLA  307 (331)
Q Consensus       297 ~~~~~~~~~i~  307 (331)
                      +...+++|||+
T Consensus       226 ~~~~~~~yNig  236 (236)
T PF01370_consen  226 PKAAGGIYNIG  236 (236)
T ss_dssp             SCTTTEEEEES
T ss_pred             CCCCCCEEEeC
Confidence            88678899985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.96  E-value=1.4e-27  Score=207.25  Aligned_cols=230  Identities=21%  Similarity=0.280  Sum_probs=181.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-------hhhc-C--CCCcEEEccCCCcccHHHHhc--CCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-------KQKI-G--GADDLFIGDIRDSNSIIPAIQ--GID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-------~~~l-~--~~~~~v~~Dl~d~~~~~~~l~--~~d  149 (331)
                      .++||||||+||||+|.+-+|+++  ||.|++++.-...       ..++ .  +.+.++++|++|.+.++++|+  ++|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd   79 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD   79 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence            367999999999999999999999  9999999874322       1222 2  459999999999999999997  689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPL  221 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~  221 (331)
                      .|+|+|+....      .+++++|..++       +.|+.|+.++++.|++++++.+|+.||+.++-+        ..|.
T Consensus        80 ~V~Hfa~~~~v------geS~~~p~~Y~-------~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   80 AVMHFAALAAV------GESMENPLSYY-------HNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             eEEeehhhhcc------chhhhCchhhe-------ehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCC
Confidence            99999998655      67889998888       889999999999999999999999999965432        2222


Q ss_pred             CCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccC--CCcch---------------hhhhccCCccc-------
Q 046297          222 NSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQD--KEGGI---------------RELLVGKDDEL-------  273 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g--~~~~~---------------~~~~~~~~~~~-------  273 (331)
                      . .+.++|+++|..+|+++++    .++.++.||.++++|  +.+..               .+...++...+       
T Consensus       147 ~-~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~  225 (343)
T KOG1371|consen  147 D-QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDY  225 (343)
T ss_pred             C-CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcc
Confidence            2 2447899999999999874    568899999999999  32221               11111111111       


Q ss_pred             --cC--CcccccCHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          274 --LQ--TETRTIARADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       274 --~~--~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                        .+  ..++.+|+-|+|+.++.++....  ..-++||+++   +.+.++.+++..+++++|+
T Consensus       226 ~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgt---g~g~~V~~lv~a~~k~~g~  285 (343)
T KOG1371|consen  226 TTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGT---GKGSSVLELVTAFEKALGV  285 (343)
T ss_pred             cccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecC---CCCccHHHHHHHHHHHhcC
Confidence              11  22778999999999999998754  3345999999   9999999999999999884

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.4e-27  Score=235.22  Aligned_cols=228  Identities=17%  Similarity=0.186  Sum_probs=168.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh--hhc----C-CCCcEEEccCCCc------ccHHHHhcCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK--QKI----G-GADDLFIGDIRDS------NSIIPAIQGID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~--~~l----~-~~~~~v~~Dl~d~------~~~~~~l~~~d  149 (331)
                      |+|||||||||||++|++.|++...|++|++++|+....  ..+    . .+++++.+|+.|+      +.+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            479999999999999999999522299999999975321  111    1 4588999999985      345554 8999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--------CC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--------PL  221 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--------~~  221 (331)
                      +|||+|+.....         ..+..       ..++|+.++.+++++|++.++++||++||..++....        +.
T Consensus        80 ~Vih~Aa~~~~~---------~~~~~-------~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         80 HVVHLAAIYDLT---------ADEEA-------QRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             EEEECceeecCC---------CCHHH-------HHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchh
Confidence            999999964321         11122       2378999999999999999999999999986542111        00


Q ss_pred             CCCCcchHHHHHHHHHHHHH-hcCCCEEEEecCcccCCCcch-----------hhhhc---cCCc--ccc---CCccccc
Q 046297          222 NSLGNGNILVWKRKAEQYLA-DSGIPYTIIRAGGLQDKEGGI-----------RELLV---GKDD--ELL---QTETRTI  281 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-~~~~~~~ilrp~~v~g~~~~~-----------~~~~~---~~~~--~~~---~~~~~~i  281 (331)
                      .....+.|..+|+.+|++++ ..+++++++||+++||+....           ...+.   ....  ...   +...+++
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  223 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIV  223 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeee
Confidence            11122569999999999998 478999999999999974310           01111   1111  111   2346889


Q ss_pred             CHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          282 ARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++|+++++..+++.+...+++||+++   ++++++.|+++.+.+.+|+
T Consensus       224 ~vddva~ai~~~~~~~~~~g~~~ni~~---~~~~s~~el~~~i~~~~g~  269 (657)
T PRK07201        224 PVDYVADALDHLMHKDGRDGQTFHLTD---PKPQRVGDIYNAFARAAGA  269 (657)
T ss_pred             eHHHHHHHHHHHhcCcCCCCCEEEeCC---CCCCcHHHHHHHHHHHhCC
Confidence            999999999999887666788999999   8999999999999998874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.95  E-value=7.6e-27  Score=221.31  Aligned_cols=225  Identities=26%  Similarity=0.406  Sum_probs=165.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC----------------CCCcEEEccCCCcccHHH
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG----------------GADDLFIGDIRDSNSIIP  143 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~----------------~~~~~v~~Dl~d~~~~~~  143 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+.++...+.                .+++++.+|+.|.+++.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            35678999999999999999999999  999999999977654321                237789999999999999


Q ss_pred             HhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       144 ~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      ++.++|+|||++|....        .+.++.       ..+++|+.|+.+++++|++.++++||++||.++.....+...
T Consensus       156 aLggiDiVVn~AG~~~~--------~v~d~~-------~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~  220 (576)
T PLN03209        156 ALGNASVVICCIGASEK--------EVFDVT-------GPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAI  220 (576)
T ss_pred             HhcCCCEEEEccccccc--------cccchh-------hHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccc
Confidence            99999999999986321        011122       223789999999999999999999999999976322211111


Q ss_pred             C-CcchHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcchh---hhhccCCccccCCcccccCHHHHHHHHHHHhcCcc-
Q 046297          224 L-GNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR---ELLVGKDDELLQTETRTIARADVAEVCIQALQFEE-  298 (331)
Q Consensus       224 ~-~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-  298 (331)
                      + ....|..+|..+|+++++.|++|++||||+++++.....   .+...... .+  ....+..+|||++++.++.++. 
T Consensus       221 ~~sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d-~~--~gr~isreDVA~vVvfLasd~~a  297 (576)
T PLN03209        221 LNLFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEED-TL--FGGQVSNLQVAELMACMAKNRRL  297 (576)
T ss_pred             hhhHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeecccc-cc--CCCccCHHHHHHHHHHHHcCchh
Confidence            1 124577889999999999999999999999987643211   01000000 11  1235899999999999998765 


Q ss_pred             cCCceEEeccCCCCCCCCHHHHHHHHHHh
Q 046297          299 AKFKAFDLASKPEGTGTPTKDFKALFSQI  327 (331)
Q Consensus       299 ~~~~~~~i~~~~~~~~~t~~e~~~~~~~~  327 (331)
                      ..+++|.+.+   +.......+.++++++
T Consensus       298 s~~kvvevi~---~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        298 SYCKVVEVIA---ETTAPLTPMEELLAKI  323 (576)
T ss_pred             ccceEEEEEe---CCCCCCCCHHHHHHhc
Confidence            6688999998   4444445555555543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=6.7e-27  Score=209.88  Aligned_cols=202  Identities=18%  Similarity=0.170  Sum_probs=159.2

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh------cC-CCEEEEccc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI------QG-IDALIILTS  156 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l------~~-~d~Vi~~ag  156 (331)
                      +||||||||++|++++++|+++  |++|++++|++++..  ..+++.+.+|+.|++.+.+++      ++ +|.|+|+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999999  999999999987543  235778899999999999999      57 999999986


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKA  236 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~  236 (331)
                      ....                          ......+++++|+++|+++||++||.+.... .           ..+...
T Consensus        77 ~~~~--------------------------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-~-----------~~~~~~  118 (285)
T TIGR03649        77 PIPD--------------------------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG-G-----------PAMGQV  118 (285)
T ss_pred             CCCC--------------------------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC-C-----------chHHHH
Confidence            4211                          1345678999999999999999998765321 1           124456


Q ss_pred             HHHHHhc-CCCEEEEecCcccCCCcch--hhhhccCC-cc--ccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCC
Q 046297          237 EQYLADS-GIPYTIIRAGGLQDKEGGI--RELLVGKD-DE--LLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKP  310 (331)
Q Consensus       237 e~~~~~~-~~~~~ilrp~~v~g~~~~~--~~~~~~~~-~~--~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~  310 (331)
                      |+++++. +++|+++||++++++....  ...+.... ..  ..+..+++|+++|+|++++.++.++...+++|++.+  
T Consensus       119 ~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g--  196 (285)
T TIGR03649       119 HAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLG--  196 (285)
T ss_pred             HHHHHhccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeC--
Confidence            7888885 9999999999998764211  11111111 11  124568899999999999999998776678999998  


Q ss_pred             CCCCCCHHHHHHHHHHhhcc
Q 046297          311 EGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       311 ~~~~~t~~e~~~~~~~~~g~  330 (331)
                       ++.+|+.|+++.+++++|+
T Consensus       197 -~~~~s~~eia~~l~~~~g~  215 (285)
T TIGR03649       197 -PELLTYDDVAEILSRVLGR  215 (285)
T ss_pred             -CccCCHHHHHHHHHHHhCC
Confidence             8999999999999999986

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.95  E-value=6.5e-27  Score=212.63  Aligned_cols=222  Identities=15%  Similarity=0.121  Sum_probs=162.7

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc----CCCEEEEcccCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ----GIDALIILTSAV  158 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~----~~d~Vi~~ag~~  158 (331)
                      ||||||+||||+++++.|+++  |+ +|+++.|..... .+.. ....+..|+.+.+.++.+.+    ++|+|||+|+..
T Consensus         1 ilItGatG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~   77 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNER--GITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS   77 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHc--CCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcccc
Confidence            699999999999999999999  87 788887754321 1111 12456788888887777654    799999999863


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC-CC----C-CCCcchHHHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH-PL----N-SLGNGNILVW  232 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~-~~----~-~~~~~~y~~s  232 (331)
                      ..        ...++...       .++|+.++.+++++|++.++ +||++||.+++.... +.    . ..+.+.|+.+
T Consensus        78 ~~--------~~~~~~~~-------~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~s  141 (314)
T TIGR02197        78 DT--------TETDGEYM-------MENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYS  141 (314)
T ss_pred             Cc--------cccchHHH-------HHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHH
Confidence            21        11233333       38899999999999999887 799999986653211 10    0 1123679999


Q ss_pred             HHHHHHHHHh------cCCCEEEEecCcccCCCcch------------hhhhccCCcccc---------CCcccccCHHH
Q 046297          233 KRKAEQYLAD------SGIPYTIIRAGGLQDKEGGI------------RELLVGKDDELL---------QTETRTIARAD  285 (331)
Q Consensus       233 K~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~------------~~~~~~~~~~~~---------~~~~~~i~v~D  285 (331)
                      |..+|+++++      .+++++++||+.+||+....            .....+....+.         ...++++|++|
T Consensus       142 K~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  221 (314)
T TIGR02197       142 KFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKD  221 (314)
T ss_pred             HHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHH
Confidence            9999988764      35789999999999987421            122223333222         12378999999


Q ss_pred             HHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          286 VAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       286 va~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++++.++.. . .+++||+++   ++++++.|+++.+.+..|+
T Consensus       222 ~a~~i~~~~~~-~-~~~~yni~~---~~~~s~~e~~~~i~~~~g~  261 (314)
T TIGR02197       222 VVDVNLWLLEN-G-VSGIFNLGT---GRARSFNDLADAVFKALGK  261 (314)
T ss_pred             HHHHHHHHHhc-c-cCceEEcCC---CCCccHHHHHHHHHHHhCC
Confidence            99999999987 3 356999999   8999999999999998874

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.95  E-value=5.8e-27  Score=196.47  Aligned_cols=179  Identities=31%  Similarity=0.374  Sum_probs=148.2

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCCCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPD  164 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~  164 (331)
                      |+|+||||++|+.++++|+++  |++|++++|++++.+. ..+++++++|+.|++.+.++++++|+||+++|....    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            799999999999999999999  9999999999988777 677999999999999999999999999999985221    


Q ss_pred             CCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCC-C---CCCcchHHHHHHHHHHHH
Q 046297          165 FDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL-N---SLGNGNILVWKRKAEQYL  240 (331)
Q Consensus       165 ~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~-~---~~~~~~y~~sK~~~e~~~  240 (331)
                                            +...+++++++++++++++||++|+.+.+...... .   ......|...|..+|+++
T Consensus        74 ----------------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  131 (183)
T PF13460_consen   74 ----------------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEAL  131 (183)
T ss_dssp             ----------------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHH
T ss_pred             ----------------------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHH
Confidence                                  37778999999999999999999999876543331 0   011146889999999999


Q ss_pred             HhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcC
Q 046297          241 ADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       241 ~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                      ++.+++|+++||++++|+......+...    -.....++|+++|+|++++.++++
T Consensus       132 ~~~~~~~~ivrp~~~~~~~~~~~~~~~~----~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  132 RESGLNWTIVRPGWIYGNPSRSYRLIKE----GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHSTSEEEEEEESEEEBTTSSSEEEESS----TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HhcCCCEEEEECcEeEeCCCcceeEEec----cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9999999999999999997553333222    112346889999999999999864

...

>PLN02996 fatty acyl-CoA reductase

Probab=99.95  E-value=7e-27  Score=223.51  Aligned_cols=233  Identities=18%  Similarity=0.169  Sum_probs=170.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCch------hh-hc---------------------CCCCcE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEES------KQ-KI---------------------GGADDL  130 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~------~~-~l---------------------~~~~~~  130 (331)
                      -.+++|+|||||||+|++|++.|++..+. .+|+++.|....      .. ++                     ...+++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            35788999999999999999999986323 478999997531      10 10                     135789


Q ss_pred             EEccCCC-------cccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-C
Q 046297          131 FIGDIRD-------SNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-G  202 (331)
Q Consensus       131 v~~Dl~d-------~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~  202 (331)
                      +.+|+++       .+.+.++++++|+|||+|+.....         .+++..+       ++|+.|+.+++++|++. +
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~---------~~~~~~~-------~~Nv~gt~~ll~~a~~~~~  152 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD---------ERYDVAL-------GINTLGALNVLNFAKKCVK  152 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc---------CCHHHHH-------HHHHHHHHHHHHHHHhcCC
Confidence            9999984       344677888999999999975321         2333333       88999999999999986 7


Q ss_pred             CCeEEEEccCCCCCCCC------CCC---------------------------------------------------CCC
Q 046297          203 AKQIVLVGSMGGTNLNH------PLN---------------------------------------------------SLG  225 (331)
Q Consensus       203 vk~~v~~SS~~~~~~~~------~~~---------------------------------------------------~~~  225 (331)
                      +++||++||.+++....      +.+                                                   ...
T Consensus       153 ~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (491)
T PLN02996        153 VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGW  232 (491)
T ss_pred             CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCC
Confidence            89999999986542210      000                                                   001


Q ss_pred             cchHHHHHHHHHHHHHh--cCCCEEEEecCcccCCCcch-----------hhh----hccCCccccC---CcccccCHHH
Q 046297          226 NGNILVWKRKAEQYLAD--SGIPYTIIRAGGLQDKEGGI-----------REL----LVGKDDELLQ---TETRTIARAD  285 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~~--~~~~~~ilrp~~v~g~~~~~-----------~~~----~~~~~~~~~~---~~~~~i~v~D  285 (331)
                      ++.|+.+|..+|.++++  .+++++++||++|+|+....           ..+    ..|....+.+   ..+++++++|
T Consensus       233 pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vdd  312 (491)
T PLN02996        233 PNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADM  312 (491)
T ss_pred             CCchHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccH
Confidence            25699999999999986  48999999999999975321           011    1122222333   3489999999


Q ss_pred             HHHHHHHHhcCc--c-cCCceEEeccCCCC--CCCCHHHHHHHHHHhhccC
Q 046297          286 VAEVCIQALQFE--E-AKFKAFDLASKPEG--TGTPTKDFKALFSQITTRF  331 (331)
Q Consensus       286 va~~~~~~l~~~--~-~~~~~~~i~~~~~~--~~~t~~e~~~~~~~~~g~~  331 (331)
                      ++++++.++...  . ..+++||+++   +  +++++.|+++.+.+..+++
T Consensus       313 vv~a~l~a~~~~~~~~~~~~vYNi~s---~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        313 VVNAMIVAMAAHAGGQGSEIIYHVGS---SLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEecC---CCCCcccHHHHHHHHHHHhhhC
Confidence            999999998753  1 2467999998   6  8899999999998887653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.95  E-value=1.1e-26  Score=210.31  Aligned_cols=213  Identities=16%  Similarity=0.152  Sum_probs=159.5

Q ss_pred             EEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCCCCC
Q 046297           86 LVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPKMKP  163 (331)
Q Consensus        86 lVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~~~~  163 (331)
                      |||||+||||++|++.|+++  |++|+++.+.             ..+|+.|.+++.++++  ++|+|||+|+...... 
T Consensus         1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~-------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~-   64 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTH-------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIH-   64 (306)
T ss_pred             CcccCCCcccHHHHHHHHhC--CCcEEEeecc-------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccc-
Confidence            69999999999999999999  9988866442             2489999999999887  5799999998643210 


Q ss_pred             CCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC--CCCC-------CC-Ccc-hHHHH
Q 046297          164 DFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN--HPLN-------SL-GNG-NILVW  232 (331)
Q Consensus       164 ~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~--~~~~-------~~-~~~-~y~~s  232 (331)
                          ....+|...+       +.|+.++.+++++|++.++++||++||..++...  .|..       +. +.+ .|+.+
T Consensus        65 ----~~~~~~~~~~-------~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~s  133 (306)
T PLN02725         65 ----ANMTYPADFI-------RENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIA  133 (306)
T ss_pred             ----hhhhCcHHHH-------HHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHH
Confidence                0112344444       7899999999999999999999999998664321  1110       11 112 49999


Q ss_pred             HHHHHHHHH----hcCCCEEEEecCcccCCCcch--------hhh--------hccCCccc-cC---CcccccCHHHHHH
Q 046297          233 KRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI--------REL--------LVGKDDEL-LQ---TETRTIARADVAE  288 (331)
Q Consensus       233 K~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~--------~~~--------~~~~~~~~-~~---~~~~~i~v~Dva~  288 (331)
                      |..+|++++    ..+++++++||+++||+....        ..+        ..+....+ ++   ..++++|++|+++
T Consensus       134 K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~  213 (306)
T PLN02725        134 KIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLAD  213 (306)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHH
Confidence            999987654    568999999999999996421        011        12222222 22   2368999999999


Q ss_pred             HHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          289 VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +++.+++.... ++.||+++   ++.+++.|+++.+.+..|
T Consensus       214 ~~~~~~~~~~~-~~~~ni~~---~~~~s~~e~~~~i~~~~~  250 (306)
T PLN02725        214 AVVFLMRRYSG-AEHVNVGS---GDEVTIKELAELVKEVVG  250 (306)
T ss_pred             HHHHHHhcccc-CcceEeCC---CCcccHHHHHHHHHHHhC
Confidence            99999987533 45789998   889999999999999876

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.95  E-value=1.3e-26  Score=208.45  Aligned_cols=232  Identities=21%  Similarity=0.161  Sum_probs=173.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--h-hh----cCCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--K-QK----IGGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~-~~----l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      .+.+++||||+||+|+||++.|+++++..+|++++..+..  . ++    ....+.++.+|+.|...+..+++++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            3568999999999999999999999444899999987642  1 11    1456899999999999999999999 8888


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC---------CCCCCCCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN---------LNHPLNSL  224 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~---------~~~~~~~~  224 (331)
                      +|+....             .+...+....+++|+.||.+++++|++.|++++||+||.++..         |..|.+..
T Consensus        82 ~aa~~~~-------------~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~  148 (361)
T KOG1430|consen   82 CAASPVP-------------DFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLK  148 (361)
T ss_pred             eccccCc-------------cccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccc
Confidence            8775222             2222223334499999999999999999999999999997532         22233322


Q ss_pred             CcchHHHHHHHHHHHHHhcC----CCEEEEecCcccCCCcch-----hhhhc-cCCccc---cCCcccccCHHHHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLADSG----IPYTIIRAGGLQDKEGGI-----RELLV-GKDDEL---LQTETRTIARADVAEVCI  291 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~~~~----~~~~ilrp~~v~g~~~~~-----~~~~~-~~~~~~---~~~~~~~i~v~Dva~~~~  291 (331)
                      ....|..+|..+|+++.+.+    +.+++|||..||||++..     ..++. +.....   .....++++++.|+.+++
T Consensus       149 ~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahi  228 (361)
T KOG1430|consen  149 HIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHI  228 (361)
T ss_pred             cccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHH
Confidence            22579999999999988643    789999999999998751     22221 222211   134467888998999888


Q ss_pred             HHhc-----CcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          292 QALQ-----FEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       292 ~~l~-----~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ++..     .+...|+.|+|.+   ++++...++...+.+..|
T Consensus       229 lA~~aL~~~~~~~~Gq~yfI~d---~~p~~~~~~~~~l~~~lg  268 (361)
T KOG1430|consen  229 LAARALLDKSPSVNGQFYFITD---DTPVRFFDFLSPLVKALG  268 (361)
T ss_pred             HHHHHHHhcCCccCceEEEEeC---CCcchhhHHHHHHHHhcC
Confidence            7643     3457899999999   888888888887777665

>PRK05865 hypothetical protein; Provisional

Probab=99.95  E-value=2e-26  Score=228.90  Aligned_cols=197  Identities=19%  Similarity=0.248  Sum_probs=159.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMK  162 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~  162 (331)
                      |+|+||||+||||+++++.|+++  |++|++++|+...  .+..++.++.+|+.|.+.+.++++++|+|||+|+....  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~--~~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPD--SWPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchh--hcccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence            57999999999999999999999  9999999997532  12345889999999999999999999999999975211  


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHh
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLAD  242 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  242 (331)
                                   .       .++|+.++.+++++|++.++++||++||..                   |..+|+++++
T Consensus        75 -------------~-------~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------K~aaE~ll~~  115 (854)
T PRK05865         75 -------------N-------DHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------QPRVEQMLAD  115 (854)
T ss_pred             -------------h-------HHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------HHHHHHHHHH
Confidence                         1       277999999999999999999999999853                   7889999999


Q ss_pred             cCCCEEEEecCcccCCCcc-hhhhhccCCcccc---CCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHH
Q 046297          243 SGIPYTIIRAGGLQDKEGG-IRELLVGKDDELL---QTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTK  318 (331)
Q Consensus       243 ~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~  318 (331)
                      ++++++++||+++||+... +...+........   ...++++|++|+|++++.+++.+...+++||+++   ++.+|+.
T Consensus       116 ~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgs---g~~~Si~  192 (854)
T PRK05865        116 CGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAA---PGELTFR  192 (854)
T ss_pred             cCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEEC---CCcccHH
Confidence            9999999999999998632 2211111111111   1235899999999999999876544567999999   8999999


Q ss_pred             HHHHHHHHh
Q 046297          319 DFKALFSQI  327 (331)
Q Consensus       319 e~~~~~~~~  327 (331)
                      |+++.+.+.
T Consensus       193 EIae~l~~~  201 (854)
T PRK05865        193 RIAAALGRP  201 (854)
T ss_pred             HHHHHHhhh
Confidence            999998764

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.95  E-value=1.5e-25  Score=197.46  Aligned_cols=222  Identities=30%  Similarity=0.422  Sum_probs=162.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-C--CCCcEEEccCCC-cccHHHHh-cCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-G--GADDLFIGDIRD-SNSIIPAI-QGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~--~~~~~v~~Dl~d-~~~~~~~l-~~~d~Vi~~ag  156 (331)
                      +|+||||||+|+||+++++.|+++  ||+|+++.|++++.... .  .+++++++|+.| .+.+.+.+ .++|+||+++|
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g   94 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG   94 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence            678999999999999999999999  99999999987764432 1  248899999998 46777888 68999999988


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC--CCCCC-CCc----chH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN--HPLNS-LGN----GNI  229 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~--~~~~~-~~~----~~y  229 (331)
                      .....          ++...       .++|..++.++++++++.++++||++||.+++...  .+..+ +..    ..|
T Consensus        95 ~~~~~----------~~~~~-------~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~  157 (251)
T PLN00141         95 FRRSF----------DPFAP-------WKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLT  157 (251)
T ss_pred             CCcCC----------CCCCc-------eeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHH
Confidence            53210          11112       26789999999999999999999999998754321  11111 110    123


Q ss_pred             HHHHHHHHHHHHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccC
Q 046297          230 LVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASK  309 (331)
Q Consensus       230 ~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~  309 (331)
                      ...|..+|+++++.++++++|||+++++...... ........   ....+++++|+|++++.++..+...+.++.+.+.
T Consensus       158 ~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~-~~~~~~~~---~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~  233 (251)
T PLN00141        158 LVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGN-IVMEPEDT---LYEGSISRDQVAEVAVEALLCPESSYKVVEIVAR  233 (251)
T ss_pred             HHHHHHHHHHHHhcCCcEEEEECCCccCCCCCce-EEECCCCc---cccCcccHHHHHHHHHHHhcChhhcCcEEEEecC
Confidence            4568899999999999999999999998643211 11010000   1134799999999999999988776778888864


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 046297          310 PEGTGTPTKDFKALFSQ  326 (331)
Q Consensus       310 ~~~~~~t~~e~~~~~~~  326 (331)
                      +.+...+++++...+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        234 ADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             CCCCchhHHHHHHHhhc
Confidence            43445788888776654

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.94  E-value=7.9e-26  Score=206.34  Aligned_cols=227  Identities=21%  Similarity=0.295  Sum_probs=168.2

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcC-----CCCcEEEccCCCcccHHHHhc--CCCEEEEcc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIG-----GADDLFIGDIRDSNSIIPAIQ--GIDALIILT  155 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~-----~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~a  155 (331)
                      +||||||+|+||+++++.|+++  |++|+++.|.... ...+.     ..++++.+|+.|++.+.++++  ++|+|||+|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            5899999999999999999999  9999988764322 11111     136688999999999999886  699999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC--------CCCCCCCCCcc
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN--------LNHPLNSLGNG  227 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~--------~~~~~~~~~~~  227 (331)
                      |.....      ....++...+       +.|+.++.+++++|++.++++||++||...+.        +..+..  +.+
T Consensus        79 g~~~~~------~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~--~~~  143 (328)
T TIGR01179        79 GLIAVG------ESVQDPLKYY-------RNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLG--PIN  143 (328)
T ss_pred             cccCcc------hhhcCchhhh-------hhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCC--CCC
Confidence            964321      1222333333       78999999999999999999999999875432        122222  225


Q ss_pred             hHHHHHHHHHHHHHh-----cCCCEEEEecCcccCCCcc------------h----hhhhccCCc--cc-------c--C
Q 046297          228 NILVWKRKAEQYLAD-----SGIPYTIIRAGGLQDKEGG------------I----RELLVGKDD--EL-------L--Q  275 (331)
Q Consensus       228 ~y~~sK~~~e~~~~~-----~~~~~~ilrp~~v~g~~~~------------~----~~~~~~~~~--~~-------~--~  275 (331)
                      .|+.+|..+|.+++.     .+++++++||+.+||+...            +    .....+...  .+       .  .
T Consensus       144 ~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       144 PYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             chHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            799999999987763     6899999999999998421            0    011111111  11       1  1


Q ss_pred             CcccccCHHHHHHHHHHHhcCc--ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          276 TETRTIARADVAEVCIQALQFE--EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       276 ~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ..++|||++|++++++.++...  ...+++||+++   ++.+|+.|+++.+.++.|+
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~---~~~~s~~ei~~~~~~~~g~  277 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGY---GQGFSVLEVIEAFKKVSGV  277 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCC---CCcccHHHHHHHHHHHhCC
Confidence            2368999999999999998753  24568999998   8899999999999998874

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.94  E-value=7.4e-26  Score=209.61  Aligned_cols=224  Identities=17%  Similarity=0.215  Sum_probs=164.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhh---hc--------------C-CCCcEEEccCCCc-----
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQ---KI--------------G-GADDLFIGDIRDS-----  138 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~---~l--------------~-~~~~~v~~Dl~d~-----  138 (331)
                      +|||||||||||++|++.|+++  |  ++|+++.|+.+...   .+              . .+++++.+|++++     
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~--g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~   78 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRR--STQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLS   78 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhC--CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcC
Confidence            4899999999999999999999  7  78999999865221   11              0 3588999999864     


Q ss_pred             -ccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC
Q 046297          139 -NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       139 -~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~  217 (331)
                       +.+.++.+++|+|||+|+.....          .+.      ....+.|+.++.+++++|.+.++++||++||.+++..
T Consensus        79 ~~~~~~~~~~~d~vih~a~~~~~~----------~~~------~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~  142 (367)
T TIGR01746        79 DAEWERLAENVDTIVHNGALVNWV----------YPY------SELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAA  142 (367)
T ss_pred             HHHHHHHHhhCCEEEeCCcEeccC----------CcH------HHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCC
Confidence             45667778999999999864321          111      1223689999999999999999999999999976432


Q ss_pred             CC--------CC---CCCCcchHHHHHHHHHHHHHh---cCCCEEEEecCcccCCCcc--------hhhhhc-----cCC
Q 046297          218 NH--------PL---NSLGNGNILVWKRKAEQYLAD---SGIPYTIIRAGGLQDKEGG--------IRELLV-----GKD  270 (331)
Q Consensus       218 ~~--------~~---~~~~~~~y~~sK~~~e~~~~~---~~~~~~ilrp~~v~g~~~~--------~~~~~~-----~~~  270 (331)
                      ..        +.   .....+.|+.+|+.+|.++++   .+++++++|||.++|+...        +..++.     +..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~  222 (367)
T TIGR01746       143 IDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY  222 (367)
T ss_pred             cCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC
Confidence            11        10   001125699999999998774   4899999999999996321        111111     111


Q ss_pred             ccccCCcccccCHHHHHHHHHHHhcCccc--CCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          271 DELLQTETRTIARADVAEVCIQALQFEEA--KFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       271 ~~~~~~~~~~i~v~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ....+...++++++|++++++.++..+..  .+++||+++   +++.++.|+++.+.+ .|
T Consensus       223 p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~---~~~~s~~e~~~~i~~-~g  279 (367)
T TIGR01746       223 PDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVN---PEPVSLDEFLEWLER-AG  279 (367)
T ss_pred             CCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecC---CCCCCHHHHHHHHHH-cC
Confidence            11112246789999999999999877653  278999999   899999999999988 55

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.94  E-value=9.5e-27  Score=208.48  Aligned_cols=215  Identities=18%  Similarity=0.175  Sum_probs=153.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~  160 (331)
                      ||||||||+|++|++|++.|.++  |++|+++.|.              ..|+.|.+.+.+.++  ++|+|||+|+....
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~--------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKER--GYEVIATSRS--------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTT--------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCch--------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            68999999999999999999998  9999999886              579999999999987  58999999986432


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCC------CCCCcchHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL------NSLGNGNILVWKR  234 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~------~~~~~~~y~~sK~  234 (331)
                      ...      ..+|+..+       .+|+.++.+++++|++.|+ ++||+||..+++.....      .+.+.+.|+++|.
T Consensus        65 ~~c------e~~p~~a~-------~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~  130 (286)
T PF04321_consen   65 DAC------EKNPEEAY-------AINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKL  130 (286)
T ss_dssp             HHH------HHSHHHHH-------HHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHH
T ss_pred             Hhh------hhChhhhH-------HHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHH
Confidence            110      12333444       8999999999999999997 99999999765443211      1222378999999


Q ss_pred             HHHHHHHhcCCCEEEEecCcccCCCcc-hh-----hhhccCCcccc-CCcccccCHHHHHHHHHHHhcCccc---CCceE
Q 046297          235 KAEQYLADSGIPYTIIRAGGLQDKEGG-IR-----ELLVGKDDELL-QTETRTIARADVAEVCIQALQFEEA---KFKAF  304 (331)
Q Consensus       235 ~~e~~~~~~~~~~~ilrp~~v~g~~~~-~~-----~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~~~~---~~~~~  304 (331)
                      ++|+.+++..-++.|+|++++||+... +.     ....++...+. +..+++++++|+|++++.++++...   ...+|
T Consensus       131 ~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giy  210 (286)
T PF04321_consen  131 EGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIY  210 (286)
T ss_dssp             HHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEE
T ss_pred             HHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeE
Confidence            999999986669999999999999432 22     22234444444 3446889999999999999987532   34599


Q ss_pred             EeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          305 DLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       305 ~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |+++   ++.+|+.|+++.+.+..|.
T Consensus       211 h~~~---~~~~S~~e~~~~i~~~~~~  233 (286)
T PF04321_consen  211 HLSG---PERVSRYEFAEAIAKILGL  233 (286)
T ss_dssp             E------BS-EEHHHHHHHHHHHHTH
T ss_pred             EEec---CcccCHHHHHHHHHHHhCC
Confidence            9999   8899999999999998774

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.94  E-value=1.1e-25  Score=191.00  Aligned_cols=221  Identities=20%  Similarity=0.191  Sum_probs=181.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcC-----CCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIG-----GADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~-----~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      .++..+-|.|||||+|+++|++|.+.  |-+|++-.|..+. ..+++     +++-+...|+.|+++++++++..++|||
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVIN  136 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVIN  136 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhc--CCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEE
Confidence            34556789999999999999999999  9999999997654 23332     2488999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHH
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWK  233 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK  233 (331)
                      +.|-                 .+...+...+++|+.+.++++..|++.||.|||++|+.+. +      ....+-|..+|
T Consensus       137 LIGr-----------------d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-n------v~s~Sr~LrsK  192 (391)
T KOG2865|consen  137 LIGR-----------------DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-N------VKSPSRMLRSK  192 (391)
T ss_pred             eecc-----------------ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-c------ccChHHHHHhh
Confidence            9984                 1223344556899999999999999999999999999884 2      22336689999


Q ss_pred             HHHHHHHHhcCCCEEEEecCcccCCCcchhhhhc---cCCcccc--C----CcccccCHHHHHHHHHHHhcCcccCCceE
Q 046297          234 RKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLV---GKDDELL--Q----TETRTIARADVAEVCIQALQFEEAKFKAF  304 (331)
Q Consensus       234 ~~~e~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~---~~~~~~~--~----~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  304 (331)
                      ..+|..+++..-+.+|+||..|||..+.+.+...   .+...++  +    +.-.+|++-|||++++.++.+|++.|++|
T Consensus       193 ~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gkty  272 (391)
T KOG2865|consen  193 AAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTY  272 (391)
T ss_pred             hhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCcee
Confidence            9999999999999999999999999987654432   2222222  2    22567999999999999999999999999


Q ss_pred             EeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          305 DLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       305 ~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ..++   +..+.+.|+++.|-+...
T Consensus       273 e~vG---P~~yql~eLvd~my~~~~  294 (391)
T KOG2865|consen  273 EFVG---PDRYQLSELVDIMYDMAR  294 (391)
T ss_pred             eecC---CchhhHHHHHHHHHHHHh
Confidence            9999   899999999999877654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=3.9e-25  Score=192.37  Aligned_cols=210  Identities=21%  Similarity=0.244  Sum_probs=170.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~  160 (331)
                      |+|||||++|.+|.+|++.|. .  +++|++++|..              .|++|++.+.++++  +.|+|||+|++...
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~~--------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~v   63 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-G--EFEVIATDRAE--------------LDITDPDAVLEVIRETRPDVVINAAAYTAV   63 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-C--CceEEeccCcc--------------ccccChHHHHHHHHhhCCCEEEECcccccc
Confidence            459999999999999999998 5  89999999974              79999999999997  57999999998766


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCCCCcchHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNSLGNGNILVW  232 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~~~~~~y~~s  232 (331)
                      ...      ..+|+..|       .+|..+..+++++|++.|. ++||+||-++++.        +++.+|.  +.|+++
T Consensus        64 D~a------E~~~e~A~-------~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~--nvYG~s  127 (281)
T COG1091          64 DKA------ESEPELAF-------AVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPL--NVYGRS  127 (281)
T ss_pred             ccc------cCCHHHHH-------HhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCCh--hhhhHH
Confidence            443      23455555       8999999999999999998 8999999876443        3333333  579999


Q ss_pred             HHHHHHHHHhcCCCEEEEecCcccCCCcc-hh----hh-hccCCcccc-CCcccccCHHHHHHHHHHHhcCcccCCceEE
Q 046297          233 KRKAEQYLADSGIPYTIIRAGGLQDKEGG-IR----EL-LVGKDDELL-QTETRTIARADVAEVCIQALQFEEAKFKAFD  305 (331)
Q Consensus       233 K~~~e~~~~~~~~~~~ilrp~~v~g~~~~-~~----~~-~~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  305 (331)
                      |+.+|..+++.+-+..|+|.+++||..++ +.    +. ..++...+. +...++++..|+|+++..++......+ +|+
T Consensus       128 Kl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~-~yH  206 (281)
T COG1091         128 KLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGG-VYH  206 (281)
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCc-EEE
Confidence            99999999999999999999999998753 32    22 223344444 344678999999999999988775444 999


Q ss_pred             eccCCCCCCCCHHHHHHHHHHhhc
Q 046297          306 LASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       306 i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +++   ....||.|+++.+.+..+
T Consensus       207 ~~~---~g~~Swydfa~~I~~~~~  227 (281)
T COG1091         207 LVN---SGECSWYEFAKAIFEEAG  227 (281)
T ss_pred             EeC---CCcccHHHHHHHHHHHhC
Confidence            999   666899999999988876

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.93  E-value=8.8e-25  Score=196.46  Aligned_cols=225  Identities=17%  Similarity=0.159  Sum_probs=150.7

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCCCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPD  164 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~  164 (331)
                      ||||||+||||+++++.|+++  |++|++++|++++......   ....|+.. +.+.+.+.++|+|||+|+....... 
T Consensus         1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~-   73 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGANTKW---EGYKPWAP-LAESEALEGADAVINLAGEPIADKR-   73 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCCcccc---eeeecccc-cchhhhcCCCCEEEECCCCCccccc-
Confidence            699999999999999999999  9999999998766443221   11123322 4566778899999999986322100 


Q ss_pred             CCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC--eEEEEccCCCCCC--CCCCC----CCCcchHHHHHHHH
Q 046297          165 FDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK--QIVLVGSMGGTNL--NHPLN----SLGNGNILVWKRKA  236 (331)
Q Consensus       165 ~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk--~~v~~SS~~~~~~--~~~~~----~~~~~~y~~sK~~~  236 (331)
                         .....++..       .++|+.++++++++|++++++  +||+.|+.+.+..  ..+..    +...+.|...+...
T Consensus        74 ---~~~~~~~~~-------~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~  143 (292)
T TIGR01777        74 ---WTEERKQEI-------RDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDW  143 (292)
T ss_pred             ---CCHHHHHHH-------HhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHH
Confidence               000011222       377999999999999999874  5666666432221  11111    11112244444445


Q ss_pred             HHHH---HhcCCCEEEEecCcccCCCcchhhh----hc-cCCccc--cCCcccccCHHHHHHHHHHHhcCcccCCceEEe
Q 046297          237 EQYL---ADSGIPYTIIRAGGLQDKEGGIREL----LV-GKDDEL--LQTETRTIARADVAEVCIQALQFEEAKFKAFDL  306 (331)
Q Consensus       237 e~~~---~~~~~~~~ilrp~~v~g~~~~~~~~----~~-~~~~~~--~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i  306 (331)
                      |+.+   ++.+++++++||+++||+.......    .. .....+  .+..++++|++|+|+++..+++++... .+||+
T Consensus       144 e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~-g~~~~  222 (292)
T TIGR01777       144 EEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASIS-GPVNA  222 (292)
T ss_pred             HHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccC-CceEe
Confidence            5443   3468999999999999996532111    11 111112  123479999999999999999876543 58999


Q ss_pred             ccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          307 ASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       307 ~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++   ++++++.|+++.+++..|+
T Consensus       223 ~~---~~~~s~~di~~~i~~~~g~  243 (292)
T TIGR01777       223 TA---PEPVRNKEFAKALARALHR  243 (292)
T ss_pred             cC---CCccCHHHHHHHHHHHhCC
Confidence            99   8999999999999998874

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.93  E-value=3.6e-25  Score=188.05  Aligned_cols=231  Identities=14%  Similarity=0.152  Sum_probs=177.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-----chhhh--cCCCCcEEEccCCCcccHHHHhc--CCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-----ESKQK--IGGADDLFIGDIRDSNSIIPAIQ--GIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-----~~~~~--l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~  153 (331)
                      ++|+||||.||||++.+..+...+|.++.+.++.-.     ..+++  ..++..++++|+.+...+..++.  .+|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            789999999999999999999999999888777521     11222  23458999999999998888875  6999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCCCCC-------CCCCCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTNLNH-------PLNSLG  225 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~~~~-------~~~~~~  225 (331)
                      .|+......      +..+|-       .....|+.++..++++++.. ++++||++||..++.+..       ...+.+
T Consensus        87 faa~t~vd~------s~~~~~-------~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nP  153 (331)
T KOG0747|consen   87 FAAQTHVDR------SFGDSF-------EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNP  153 (331)
T ss_pred             hHhhhhhhh------hcCchH-------HHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCC
Confidence            999755421      222333       23377999999999999988 699999999986533211       112223


Q ss_pred             cchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcchhh--------hhccCCccccCCc---ccccCHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGIRE--------LLVGKDDELLQTE---TRTIARADVAEVC  290 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~~~--------~~~~~~~~~~~~~---~~~i~v~Dva~~~  290 (331)
                      .++|+++|+++|.+++    +++++++++|-++||||......        ...+.+..+-+.+   ++|+|++|+++++
T Consensus       154 tnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~  233 (331)
T KOG0747|consen  154 TNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAF  233 (331)
T ss_pred             CCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHH
Confidence            3789999999998876    58999999999999999865222        2234444444433   7889999999999


Q ss_pred             HHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          291 IQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       291 ~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ..+++. ...|++|||+.   +.+.+..|+++.+.+..++
T Consensus       234 ~~v~~K-g~~geIYNIgt---d~e~~~~~l~k~i~eli~~  269 (331)
T KOG0747|consen  234 KAVLEK-GELGEIYNIGT---DDEMRVIDLAKDICELFEK  269 (331)
T ss_pred             HHHHhc-CCccceeeccC---cchhhHHHHHHHHHHHHHH
Confidence            998887 45689999999   8889999999988877653

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=1.7e-24  Score=195.13  Aligned_cols=211  Identities=9%  Similarity=0.007  Sum_probs=148.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      .|+||||||+||||++|+++|+++  |++|+...                 .|+.|.+.+...++  ++|+|||+||...
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~-----------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~   69 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGS-----------------GRLENRASLEADIDAVKPTHVFNAAGVTG   69 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC--CCEEEEec-----------------CccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            478999999999999999999999  99987532                 34455555666665  6899999999753


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC-CCCCCCC----------CCCCCC-cc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM-GGTNLNH----------PLNSLG-NG  227 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~-~~~~~~~----------~~~~~~-~~  227 (331)
                      ....   +....+|..++       ++|+.++.+++++|++.|++++++.|+. +++....          ...+.. .+
T Consensus        70 ~~~~---~~~~~~p~~~~-------~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s  139 (298)
T PLN02778         70 RPNV---DWCESHKVETI-------RANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGS  139 (298)
T ss_pred             CCCc---hhhhhCHHHHH-------HHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCC
Confidence            2100   00123444444       8999999999999999999766553332 2221100          011111 26


Q ss_pred             hHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcc----h-hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCc
Q 046297          228 NILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG----I-RELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFK  302 (331)
Q Consensus       228 ~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~----~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~  302 (331)
                      .|+.+|+.+|.+++.+. +..++|++..+++...    + ..++.+.....  .+.++++++|++++++.+++.+.  +.
T Consensus       140 ~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~--~~~s~~yv~D~v~al~~~l~~~~--~g  214 (298)
T PLN02778        140 FYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVN--IPNSMTILDELLPISIEMAKRNL--TG  214 (298)
T ss_pred             chHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeE--cCCCCEEHHHHHHHHHHHHhCCC--CC
Confidence            79999999999998764 6778999887775422    1 22222322211  22468999999999999987543  24


Q ss_pred             eEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          303 AFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       303 ~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +||+++   ++.+++.|+++++.+++|
T Consensus       215 ~yNigs---~~~iS~~el~~~i~~~~~  238 (298)
T PLN02778        215 IYNFTN---PGVVSHNEILEMYRDYID  238 (298)
T ss_pred             eEEeCC---CCcccHHHHHHHHHHHhC
Confidence            999999   889999999999999887

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.93  E-value=5.2e-26  Score=199.00  Aligned_cols=219  Identities=18%  Similarity=0.233  Sum_probs=161.1

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---------CCCc----EEEccCCCcccHHHHhc--CCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---------GADD----LFIGDIRDSNSIIPAIQ--GID  149 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---------~~~~----~v~~Dl~d~~~~~~~l~--~~d  149 (331)
                      ||||||+|.||+.||++|++.. -.++++++|++.++..+.         .++.    .+.+|++|.+.+.++++  ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~-p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYG-PKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcC-CCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            7999999999999999999983 268999999987654421         1243    34899999999999999  899


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      +|||.|+.....      .-..+|...+       ++|+.|+++++++|.++++++||++||--+.+|.        +.|
T Consensus        80 iVfHaAA~KhVp------l~E~~p~eav-------~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Pt--------nvm  138 (293)
T PF02719_consen   80 IVFHAAALKHVP------LMEDNPFEAV-------KTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPT--------NVM  138 (293)
T ss_dssp             EEEE------HH------HHCCCHHHHH-------HHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS----------SHH
T ss_pred             EEEEChhcCCCC------hHHhCHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEccccccCCCC--------cHH
Confidence            999999986552      2234566666       8999999999999999999999999997665533        469


Q ss_pred             HHHHHHHHHHHHhc-------CCCEEEEecCcccCCCcch-----hhhhccCCccccC--CcccccCHHHHHHHHHHHhc
Q 046297          230 LVWKRKAEQYLADS-------GIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQ--TETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       230 ~~sK~~~e~~~~~~-------~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~l~  295 (331)
                      +++|+.+|.++...       +..++++|+|+|.|..++.     .++..|.+..+.+  -.+-|++++|.++.++++..
T Consensus       139 GatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~  218 (293)
T PF02719_consen  139 GATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAA  218 (293)
T ss_dssp             HHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHh
Confidence            99999999998742       4578999999999988873     3444565555543  33677899999999999987


Q ss_pred             CcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          296 FEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       296 ~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ... .|++|.+--   |+++.+.|+++.+-+..|
T Consensus       219 ~~~-~geifvl~m---g~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  219 LAK-GGEIFVLDM---GEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             H---TTEEEEE------TCEECCCHHHHHHHHTT
T ss_pred             hCC-CCcEEEecC---CCCcCHHHHHHHHHhhcc
Confidence            653 578999998   899999999999988776

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.93  E-value=1.3e-24  Score=201.73  Aligned_cols=223  Identities=21%  Similarity=0.293  Sum_probs=184.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-----CCCcEEEccCCCcccHHHHhcC--CC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-----GADDLFIGDIRDSNSIIPAIQG--ID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-----~~~~~v~~Dl~d~~~~~~~l~~--~d  149 (331)
                      .+|+||||||+|-||+.+++++++.. -.+++.++|++.+...+    .     ..+.++-+|++|.+.+.+++++  +|
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~-p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFN-PKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcC-CCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            58999999999999999999999983 35788999998665432    1     2478889999999999999997  99


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      +|+|.|+..+.      |.-..+|...+       ++|+.||.|++++|.++||++||++||-.+.+|.        +.|
T Consensus       328 ~VfHAAA~KHV------Pl~E~nP~Eai-------~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~Pt--------Nvm  386 (588)
T COG1086         328 IVFHAAALKHV------PLVEYNPEEAI-------KTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPT--------NVM  386 (588)
T ss_pred             eEEEhhhhccC------cchhcCHHHHH-------HHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCc--------hHh
Confidence            99999998766      34445666666       8899999999999999999999999997665544        458


Q ss_pred             HHHHHHHHHHHHhc-------CCCEEEEecCcccCCCcch-----hhhhccCCccccC--CcccccCHHHHHHHHHHHhc
Q 046297          230 LVWKRKAEQYLADS-------GIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQ--TETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       230 ~~sK~~~e~~~~~~-------~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~l~  295 (331)
                      +++|+.+|.++...       +-+++++|+|||.|..++.     .++..|.+..+-+  -.+-|.++.|.++.++++..
T Consensus       387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a  466 (588)
T COG1086         387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGA  466 (588)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHh
Confidence            89999999988632       3678999999999999873     3444565555543  23667899999999999987


Q ss_pred             CcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          296 FEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       296 ~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      .. ..|++|-+-.   |+++++.|+++.+-+..|
T Consensus       467 ~~-~gGeifvldM---GepvkI~dLAk~mi~l~g  496 (588)
T COG1086         467 IA-KGGEIFVLDM---GEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             hc-CCCcEEEEcC---CCCeEHHHHHHHHHHHhC
Confidence            75 5688999999   999999999999988876

>PRK12320 hypothetical protein; Provisional

Probab=99.92  E-value=2.5e-24  Score=209.94  Aligned_cols=199  Identities=20%  Similarity=0.238  Sum_probs=151.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMK  162 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~  162 (331)
                      |+||||||+||||++|+++|+++  ||+|++++|.+...  ...+++++.+|+.|+. +.+++.++|+|||+|+....  
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~~--~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~--   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHDA--LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTS--   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhhc--ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCcc--
Confidence            47999999999999999999999  99999999975432  2345889999999985 78888999999999985211  


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHh
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLAD  242 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  242 (331)
                                         ....+|+.++.+++++|++.|+ ++|++||.++. +.         .|    ..+|.++..
T Consensus        74 -------------------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G~-~~---------~~----~~aE~ll~~  119 (699)
T PRK12320         74 -------------------APGGVGITGLAHVANAAARAGA-RLLFVSQAAGR-PE---------LY----RQAETLVST  119 (699)
T ss_pred             -------------------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCCCC-Cc---------cc----cHHHHHHHh
Confidence                               0114699999999999999998 79999987531 10         02    147888888


Q ss_pred             cCCCEEEEecCcccCCCcchh--hhhccC-CccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHH
Q 046297          243 SGIPYTIIRAGGLQDKEGGIR--ELLVGK-DDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKD  319 (331)
Q Consensus       243 ~~~~~~ilrp~~v~g~~~~~~--~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e  319 (331)
                      ++++++++|++++||+.....  ..+... .....+....++|++|++++++.+++.+. .+ +|||++   ++.+|+.|
T Consensus       120 ~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~-~G-iyNIG~---~~~~Si~e  194 (699)
T PRK12320        120 GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR-NG-VVDLAT---PDTTNVVT  194 (699)
T ss_pred             cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC-CC-EEEEeC---CCeeEHHH
Confidence            889999999999999854311  111100 01112334556899999999999997643 33 999999   89999999


Q ss_pred             HHHHHHHh
Q 046297          320 FKALFSQI  327 (331)
Q Consensus       320 ~~~~~~~~  327 (331)
                      +.+++...
T Consensus       195 l~~~i~~~  202 (699)
T PRK12320        195 AWRLLRSV  202 (699)
T ss_pred             HHHHHHHh
Confidence            99888654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.92  E-value=1.9e-24  Score=188.28  Aligned_cols=213  Identities=29%  Similarity=0.339  Sum_probs=158.4

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+|+||||.+|+++++.|++.  +++|++++|+..+  .+.+. .+++++.+|+.|++.+.++|+++|+||.+.+...  
T Consensus         1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~--   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH--   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC--
T ss_pred             CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch--
Confidence            799999999999999999998  9999999999754  33332 4688999999999999999999999999987532  


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA  241 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  241 (331)
                                             ...+....+++++|+++|||+||+.|..........  ..+.......|...|++++
T Consensus        77 -----------------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~--~~p~~~~~~~k~~ie~~l~  131 (233)
T PF05368_consen   77 -----------------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSG--SEPEIPHFDQKAEIEEYLR  131 (233)
T ss_dssp             -----------------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTT--STTHHHHHHHHHHHHHHHH
T ss_pred             -----------------------hhhhhhhhhHHHhhhccccceEEEEEeccccccccc--ccccchhhhhhhhhhhhhh
Confidence                                   124667899999999999999997443333322211  1222446678999999999


Q ss_pred             hcCCCEEEEecCcccCCCcchhhh---hccCC--cccc---CCcccc-cCHHHHHHHHHHHhcCccc--CCceEEeccCC
Q 046297          242 DSGIPYTIIRAGGLQDKEGGIREL---LVGKD--DELL---QTETRT-IARADVAEVCIQALQFEEA--KFKAFDLASKP  310 (331)
Q Consensus       242 ~~~~~~~ilrp~~v~g~~~~~~~~---~~~~~--~~~~---~~~~~~-i~v~Dva~~~~~~l~~~~~--~~~~~~i~~~~  310 (331)
                      +.+++|++||||+++++.......   ..+..  ..+.   +....+ ++.+|+++++..++.++..  .++.+.+.   
T Consensus       132 ~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~---  208 (233)
T PF05368_consen  132 ESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA---  208 (233)
T ss_dssp             HCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG---
T ss_pred             hccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC---
Confidence            999999999999988764321111   11111  1122   223455 4999999999999999864  46788887   


Q ss_pred             CCCCCCHHHHHHHHHHhhcc
Q 046297          311 EGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       311 ~~~~~t~~e~~~~~~~~~g~  330 (331)
                       ++.+|++|+++++++.+|+
T Consensus       209 -~~~~t~~eia~~~s~~~G~  227 (233)
T PF05368_consen  209 -GETLTYNEIAAILSKVLGK  227 (233)
T ss_dssp             -GGEEEHHHHHHHHHHHHTS
T ss_pred             -CCCCCHHHHHHHHHHHHCC
Confidence             4679999999999999996

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.90  E-value=7.9e-23  Score=174.12  Aligned_cols=221  Identities=18%  Similarity=0.161  Sum_probs=146.2

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-CCCEEEEcccCCCCCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-GIDALIILTSAVPKMK  162 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-~~d~Vi~~ag~~~~~~  162 (331)
                      |+||||||+||++|+.+|.+.  ||+|++++|++.+.+.... .+.       ..+.+.+... ++|+|||+||..-.  
T Consensus         1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~--   69 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIA--   69 (297)
T ss_pred             CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCccc--
Confidence            689999999999999999999  9999999999876544221 121       2233445555 79999999996222  


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCC--C------CCCCCCCCCCCcchHHHH
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMG--G------TNLNHPLNSLGNGNILVW  232 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~--~------~~~~~~~~~~~~~~y~~s  232 (331)
                             ..+|...++  +...+.-+..|+.++++..+..  .+.+|.-|..+  +      ++|+.|..... ..-.+-
T Consensus        70 -------~rrWt~~~K--~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~F-la~lc~  139 (297)
T COG1090          70 -------ERRWTEKQK--EEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDF-LAQLCQ  139 (297)
T ss_pred             -------cccCCHHHH--HHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCCh-HHHHHH
Confidence                   122222221  1112445777999999988554  44455433332  2      22232221111 001112


Q ss_pred             HHHHHHHH-HhcCCCEEEEecCcccCCCcchhhhhc-------cCCccccCCcccccCHHHHHHHHHHHhcCcccCCceE
Q 046297          233 KRKAEQYL-ADSGIPYTIIRAGGLQDKEGGIRELLV-------GKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAF  304 (331)
Q Consensus       233 K~~~e~~~-~~~~~~~~ilrp~~v~g~~~~~~~~~~-------~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  304 (331)
                      .|+-|..- ++.|.+++.+|.|.|.++.++....+.       |.+..-....++|||++|+++++..+++++...| .|
T Consensus       140 ~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsG-p~  218 (297)
T COG1090         140 DWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSG-PF  218 (297)
T ss_pred             HHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCC-cc
Confidence            33333322 346899999999999998877443332       2222222345889999999999999999988777 79


Q ss_pred             EeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          305 DLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       305 ~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++.   |.+++.+++.+.+.+++.|
T Consensus       219 N~ta---P~PV~~~~F~~al~r~l~R  241 (297)
T COG1090         219 NLTA---PNPVRNKEFAHALGRALHR  241 (297)
T ss_pred             cccC---CCcCcHHHHHHHHHHHhCC
Confidence            9999   9999999999999999875

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.9e-23  Score=182.56  Aligned_cols=227  Identities=18%  Similarity=0.151  Sum_probs=157.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      .++||||||+|+||++++++|+++  |++|+++.|+++..+.+    ..++.++++|++|.+.+.++++       ++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            367999999999999999999999  99999999987665543    3357889999999998887764       5899


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      ||||+|.......  ......++       ...+++|+.++.++++++    ++.+.++||++||..+.....+     .
T Consensus        80 vi~~ag~~~~~~~--~~~~~~~~-------~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~  145 (276)
T PRK06482         80 VVSNAGYGLFGAA--EELSDAQI-------RRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG-----F  145 (276)
T ss_pred             EEECCCCCCCccc--ccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCC-----C
Confidence            9999997432110  00011111       233478999999999886    5667889999999875432221     2


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCc---chhhhhc---cC-----CccccCCc-ccccCHHHHH
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEG---GIRELLV---GK-----DDELLQTE-TRTIARADVA  287 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~---~~~~~~~---~~-----~~~~~~~~-~~~i~v~Dva  287 (331)
                      ..|+.+|+..|.+++       .++++++++|||.+..+..   .......   +.     ...+.... ..+.+++|++
T Consensus       146 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  225 (276)
T PRK06482        146 SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMV  225 (276)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHH
Confidence            569999999887664       2689999999998843321   1000000   00     00000111 1236899999


Q ss_pred             HHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhh
Q 046297          288 EVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~  328 (331)
                      ++++.++..+.. +..||+++   ++..+..|+++.+.+.+
T Consensus       226 ~a~~~~~~~~~~-~~~~~~g~---~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        226 QAMIASADQTPA-PRRLTLGS---DAYASIRAALSERLAAL  262 (276)
T ss_pred             HHHHHHHcCCCC-CeEEecCh---HHHHHHHHHHHHHHHHH
Confidence            999999986644 45799998   77777777776555543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=3e-22  Score=193.35  Aligned_cols=233  Identities=15%  Similarity=0.157  Sum_probs=162.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchh---h----hc---------------------CCCCcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESK---Q----KI---------------------GGADDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~---~----~l---------------------~~~~~~v  131 (331)
                      .+++|||||||||+|++|++.|++..++ .+|+++.|.....   +    ++                     ...+.++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            5789999999999999999999987333 3789999965321   0    11                     1247789


Q ss_pred             EccCCCc------ccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCC
Q 046297          132 IGDIRDS------NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAK  204 (331)
Q Consensus       132 ~~Dl~d~------~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk  204 (331)
                      .+|++++      +....+.+++|+|||+|+.....         .+++..+       ++|+.|+.+++++|++. +++
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~---------~~~~~a~-------~vNV~GT~nLLelA~~~~~lk  261 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD---------ERYDVAI-------DINTRGPCHLMSFAKKCKKLK  261 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc---------cCHHHHH-------HHHHHHHHHHHHHHHHcCCCC
Confidence            9999987      35566667899999999974321         2233333       88999999999999886 578


Q ss_pred             eEEEEccCCCCCCCC------CCC--------------------------------------------------------
Q 046297          205 QIVLVGSMGGTNLNH------PLN--------------------------------------------------------  222 (331)
Q Consensus       205 ~~v~~SS~~~~~~~~------~~~--------------------------------------------------------  222 (331)
                      +||++||++++....      +.+                                                        
T Consensus       262 ~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~  341 (605)
T PLN02503        262 LFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERA  341 (605)
T ss_pred             eEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchh
Confidence            999999986421110      110                                                        


Q ss_pred             --CCCcchHHHHHHHHHHHHHhc--CCCEEEEecCcccC----------CCcc---hhhhhcc--CCcccc---CCcccc
Q 046297          223 --SLGNGNILVWKRKAEQYLADS--GIPYTIIRAGGLQD----------KEGG---IRELLVG--KDDELL---QTETRT  280 (331)
Q Consensus       223 --~~~~~~y~~sK~~~e~~~~~~--~~~~~ilrp~~v~g----------~~~~---~~~~~~~--~~~~~~---~~~~~~  280 (331)
                        ...++.|..+|..+|.++++.  +++++|+||+.|..          +...   ..-...+  .-..++   +...+.
T Consensus       342 ~~~~~pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~Di  421 (605)
T PLN02503        342 KLYGWQDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDV  421 (605)
T ss_pred             hhCCCCChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeE
Confidence              001277999999999999864  79999999999833          3211   0011112  111122   234788


Q ss_pred             cCHHHHHHHHHHHhcC-c---ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          281 IARADVAEVCIQALQF-E---EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~-~---~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++|.|+++++.+... .   ...+++||+++.. .+++++.++.+.+.+...+
T Consensus       422 VPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~-~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        422 VPADMVVNATLAAMAKHGGAAKPEINVYQIASSV-VNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             EeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCC-CCCeEHHHHHHHHHHHHhh
Confidence            9999999999998432 1   1246899999811 2999999999998876543

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.89  E-value=4.9e-23  Score=181.15  Aligned_cols=188  Identities=19%  Similarity=0.171  Sum_probs=114.0

Q ss_pred             EECCCChhHHHHHHHHHhcCCCCeEEEEecCCch---hhhc-----------------CCCCcEEEccCCCc------cc
Q 046297           87 VTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES---KQKI-----------------GGADDLFIGDIRDS------NS  140 (331)
Q Consensus        87 VtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~---~~~l-----------------~~~~~~v~~Dl~d~------~~  140 (331)
                      |||||||+|++|+++|+++++..+|+++.|..+.   .+.+                 ..+++++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            7999999999999999999433399999998632   1111                 45699999999975      45


Q ss_pred             HHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC-
Q 046297          141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH-  219 (331)
Q Consensus       141 ~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~-  219 (331)
                      +.++.+.+|+|||||+......                +.....+.|+.|++++++.|.+.+.++|+|+||+.+..... 
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~----------------~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~  144 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNA----------------PYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG  144 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-----------------S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT
T ss_pred             hhccccccceeeecchhhhhcc----------------cchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC
Confidence            6777789999999999755432                12233488999999999999987777999999963211111 


Q ss_pred             --------------CCCCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCc-c-------hh-----hhhcc
Q 046297          220 --------------PLNSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEG-G-------IR-----ELLVG  268 (331)
Q Consensus       220 --------------~~~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~-~-------~~-----~~~~~  268 (331)
                                    .......+.|..+|+.+|+++++    .|++++|+|||.|+|... +       ..     ....+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~  224 (249)
T PF07993_consen  145 TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALG  224 (249)
T ss_dssp             T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-
T ss_pred             cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcC
Confidence                          01112227899999999999874    389999999999999422 1       11     11112


Q ss_pred             CCccccCC---cccccCHHHHHHHH
Q 046297          269 KDDELLQT---ETRTIARADVAEVC  290 (331)
Q Consensus       269 ~~~~~~~~---~~~~i~v~Dva~~~  290 (331)
                      .....+..   ..++++||.+|++|
T Consensus       225 ~~p~~~~~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  225 AFPDLPGDPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             EEES-SB---TT--EEEHHHHHHHH
T ss_pred             CcccccCCCCceEeEECHHHHHhhC
Confidence            22223332   38889999999886

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.7e-22  Score=172.95  Aligned_cols=208  Identities=19%  Similarity=0.210  Sum_probs=148.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh----c---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK----I---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +..++++||||+|+||+++++.|+++  |++|++++|+.+. .+.    +   ..++.++++|++|++++.++++     
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            44678999999999999999999999  9999999997532 221    1   2346789999999998887775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCC-CCC-CC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGT-NLN-HP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~-~~~-~~  220 (331)
                        ++|+||||+|....        ...+|+.       .+++|+.++.++++++.+.  ...+||++||..+. .+. .+
T Consensus        82 ~~~~d~vi~~ag~~~~--------~~~~~~~-------~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  146 (248)
T PRK07806         82 FGGLDALVLNASGGME--------SGMDEDY-------AMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKT  146 (248)
T ss_pred             CCCCcEEEECCCCCCC--------CCCCcce-------eeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccC
Confidence              58999999985321        1112333       3489999999999999864  23489999996542 121 11


Q ss_pred             CCCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchhhhhccCCc-ccc---CCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIRELLVGKDD-ELL---QTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~-~~~---~~~~~~i~v~Dva~~  289 (331)
                      .+.  ...|+.+|..+|.+++.       .++++++++|+.+-++...  .+...... ...   .....+++++|+|++
T Consensus       147 ~~~--~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  222 (248)
T PRK07806        147 MPE--YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA--TLLNRLNPGAIEARREAAGKLYTVSEFAAE  222 (248)
T ss_pred             Ccc--ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh--hhhccCCHHHHHHHHhhhcccCCHHHHHHH
Confidence            111  25699999999987763       5899999999988765321  11110000 000   011357999999999


Q ss_pred             HHHHhcCcccCCceEEecc
Q 046297          290 CIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~~~~~~~~i~~  308 (331)
                      ++.+++.+...|++|++++
T Consensus       223 ~~~l~~~~~~~g~~~~i~~  241 (248)
T PRK07806        223 VARAVTAPVPSGHIEYVGG  241 (248)
T ss_pred             HHHHhhccccCccEEEecC
Confidence            9999997767789999998

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.8e-22  Score=178.99  Aligned_cols=228  Identities=16%  Similarity=0.158  Sum_probs=158.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      ++++||||||+|+||++++++|+++  |++|++++|++++.+.+    ...+.++++|++|++.+.++++       ++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALER--GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4578999999999999999999999  99999999987665432    3457788999999988877665       579


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +||||+|......  +.....++++.       ..++|+.++..+++++    ++.+.+++|++||..+..+....    
T Consensus        80 ~vi~~ag~~~~~~--~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~----  146 (275)
T PRK08263         80 IVVNNAGYGLFGM--IEEVTESEARA-------QIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMS----  146 (275)
T ss_pred             EEEECCCCccccc--cccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCc----
Confidence            9999999753211  11112222333       3488999976666654    56678899999998765433221    


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhcc---CCccc---c---CCcccc-cCHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVG---KDDEL---L---QTETRT-IARADVAE  288 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~---~~~~~---~---~~~~~~-i~v~Dva~  288 (331)
                       ..|+.+|...+.+.+       .+|++++++|||.+.++..........   ....+   .   .....+ ++++|+++
T Consensus       147 -~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~  225 (275)
T PRK08263        147 -GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAE  225 (275)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHH
Confidence             459999999876654       368999999999987764320000000   00000   0   011234 88999999


Q ss_pred             HHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHh
Q 046297          289 VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQI  327 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~  327 (331)
                      +++.+++.+...++.++...   +..+++.++.+.+.+-
T Consensus       226 ~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        226 ALLKLVDAENPPLRLFLGSG---VLDLAKADYERRLATW  261 (275)
T ss_pred             HHHHHHcCCCCCeEEEeCch---HHHHHHHHHHHHHHHH
Confidence            99999998766665454444   5678888888877663

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.89  E-value=2.3e-22  Score=177.92  Aligned_cols=213  Identities=13%  Similarity=0.111  Sum_probs=149.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ++++++|||||+|+||+++++.|+++  |++|++++|++++.+++       ...+.++++|++|.+.+.++++      
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34688999999999999999999999  99999999988554332       2246789999999998887765      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHH-HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAA-KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa-~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                       ++|+||||+|......  ........+       ....++|+.+    +.++++++ ++.+.++||++||..+.....+
T Consensus        83 ~~~d~vi~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~  153 (262)
T PRK13394         83 GSVDILVSNAGIQIVNP--IENYSFADW-------KKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL  153 (262)
T ss_pred             CCCCEEEECCccCCCCc--hhhCCHHHH-------HHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC
Confidence             3899999999743211  001111112       2233788888    67778888 6777899999999866433222


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccCC-------cccc---CCccccc
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGKD-------DELL---QTETRTI  281 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~-------~~~~---~~~~~~i  281 (331)
                      .     ..|..+|...+.+.+       ..+++++++|||.++++...  .........       ..+.   .....++
T Consensus       154 ~-----~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (262)
T PRK13394        154 K-----SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFT  228 (262)
T ss_pred             C-----cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCC
Confidence            2     458899988876654       25899999999999987532  111110000       0011   1125689


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++|++++++.++..+.  ..|+.|++.+
T Consensus       229 ~~~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        229 TVEDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             CHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence            99999999999997653  3478899887

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=5.8e-22  Score=173.66  Aligned_cols=212  Identities=17%  Similarity=0.142  Sum_probs=149.0

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-h-------hcCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-Q-------KIGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~-------~l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ++.+++||||||+|+||+++++.|+++  |++|+++.|+..+. +       ....++.++.+|+.|++.+.++++    
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999  99998878765432 1       123357899999999998888774    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+|||++|......  +......++       ....++|+.+..++++.+    ++.+.++||++||..+.....
T Consensus        81 ~~~~id~vi~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~  151 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKP--LADMSDDEW-------DEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP  151 (249)
T ss_pred             HcCCCCEEEECCccCCCCC--hhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC
Confidence               5799999999532211  000111111       233477888888887776    566789999999987653322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh--hhccCCccccCCcccccCHHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE--LLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      .     ...|..+|...+.+++       +.+++++++|||+++++......  .........+  ...+++++|+++++
T Consensus       152 ~-----~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~  224 (249)
T PRK12825        152 G-----RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETP--LGRSGTPEDIARAV  224 (249)
T ss_pred             C-----chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCC--CCCCcCHHHHHHHH
Confidence            1     2469999988776554       36899999999999998643110  0011100111  22378999999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      ..++.++.  ..|++|++.+
T Consensus       225 ~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        225 AFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             HHHhCccccCcCCCEEEeCC
Confidence            99997653  4689999997

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.89  E-value=5.4e-21  Score=173.95  Aligned_cols=228  Identities=43%  Similarity=0.644  Sum_probs=166.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC------CCcEEEccCCCcccH-HHHhc----C
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG------ADDLFIGDIRDSNSI-IPAIQ----G  147 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~------~~~~v~~Dl~d~~~~-~~~l~----~  147 (331)
                      ..+.++|+|+||||.+|+.+++.|+++  |+.|+++.|+.++...+.+      ....+..|...+.++ ..+.+    .
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkr--gf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~  153 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKR--GFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG  153 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHC--CCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence            344678999999999999999999999  9999999999877655422      245555555544333 33332    2


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCC-c
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLG-N  226 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~-~  226 (331)
                      ..+++-++|..+.              ..  +......+++.|++++++||+.+|++|||++|++++.+.+.+.+... .
T Consensus       154 ~~~v~~~~ggrp~--------------~e--d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~  217 (411)
T KOG1203|consen  154 VVIVIKGAGGRPE--------------EE--DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLN  217 (411)
T ss_pred             ceeEEecccCCCC--------------cc--cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhh
Confidence            3466666664222              11  33445589999999999999999999999999999888877766544 3


Q ss_pred             chHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCc--ccccCHHHHHHHHHHHhcCcccCC-ce
Q 046297          227 GNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTE--TRTIARADVAEVCIQALQFEEAKF-KA  303 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~--~~~i~v~Dva~~~~~~l~~~~~~~-~~  303 (331)
                      ..+..+|+.+|+++++.|+++++|||+....+...................  -..+...|+|+.++.++.++...+ ++
T Consensus       218 ~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~  297 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKV  297 (411)
T ss_pred             hhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhcccee
Confidence            456688999999999999999999999888766655444444433333222  236889999999999999887544 56


Q ss_pred             EEeccCCCCCCCCHHHHHHHH
Q 046297          304 FDLASKPEGTGTPTKDFKALF  324 (331)
Q Consensus       304 ~~i~~~~~~~~~t~~e~~~~~  324 (331)
                      ..++..+++..-.+.++.+.+
T Consensus       298 ~~~v~~~~gpg~~~~~l~~~~  318 (411)
T KOG1203|consen  298 VELVLKPEGPGRPYKVLLELF  318 (411)
T ss_pred             EEeecCCCCCCccHHHHHhhc
Confidence            677765656666666666654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.5e-22  Score=176.23  Aligned_cols=229  Identities=16%  Similarity=0.112  Sum_probs=158.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +.+++||||||+|+||+++++.|+++  |++|++++|++++.+.+         ..++.++.+|+.|++.+.++++    
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            44689999999999999999999999  99999999987554322         1346788999999998887776    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+|||++|...... .+......+++.       +.++|+.+...+++++.+    .+.++||++||..+.....
T Consensus        83 ~~~~~d~li~~ag~~~~~~-~~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  154 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIG-PITQIDSDAWRR-------TVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR  154 (276)
T ss_pred             HcCCCCEEEECCCcccCCC-ChhhCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC
Confidence               6899999999643211 111111112222       337788888888876644    3446899999987654332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      +.     ..|+.+|...|.+++.       .+++++++|||++.++.....    ..........+  ...+++++|+|+
T Consensus       155 ~~-----~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~  227 (276)
T PRK05875        155 WF-----GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP--LPRVGEVEDVAN  227 (276)
T ss_pred             CC-----cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC--CCCCcCHHHHHH
Confidence            22     4599999999988762       479999999999977643210    00000000001  123578999999


Q ss_pred             HHHHHhcCcc--cCCceEEeccCCCCCCC----CHHHHHHHHHHhh
Q 046297          289 VCIQALQFEE--AKFKAFDLASKPEGTGT----PTKDFKALFSQIT  328 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~~~~~~~~----t~~e~~~~~~~~~  328 (331)
                      +++.++.++.  ..|+++++.+   +...    +..|+++.+.+..
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~---g~~~~~~~~~~~~~~~~~~~~  270 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDG---GHMLRRGPDFSSMLEPVFGAD  270 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECC---CeeccCCccHHHHHHHHhhHH
Confidence            9999998764  3478999998   7665    6666666555443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.88  E-value=5.5e-22  Score=167.14  Aligned_cols=203  Identities=19%  Similarity=0.179  Sum_probs=150.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-----CCcEEEccCCCcccHHHHhc-------CC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-----ADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-----~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..|.++||||+++||.+++++|.++  |++|++..|+.++++++..     .+..+..|++|.+++.++++       ++
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEA--GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            3578999999999999999999999  9999999999998887643     36788999999988766664       69


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |++|||||....  ..+......+|+..+       ++|+.|..+    ++..+.+.+-.+||.+||..+..+....   
T Consensus        83 DiLvNNAGl~~g--~~~~~~~~~dw~~Mi-------d~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~---  150 (246)
T COG4221          83 DILVNNAGLALG--DPLDEADLDDWDRMI-------DTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG---  150 (246)
T ss_pred             cEEEecCCCCcC--ChhhhCCHHHHHHHH-------HHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC---
Confidence            999999998766  234455555666655       999988655    5555677777799999999875443322   


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccC--CcccccCHHHHHHHHHHHhc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQ--TETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~l~  295 (331)
                        +.|+.+|+.+..+-.       ..+++++.+.||.+-+..-..... .|.......  .+...+..+|+|+++.++++
T Consensus       151 --~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~-~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~  227 (246)
T COG4221         151 --AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRF-EGDDERADKVYKGGTALTPEDIAEAVLFAAT  227 (246)
T ss_pred             --ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccC-CchhhhHHHHhccCCCCCHHHHHHHHHHHHh
Confidence              458899999887643       368999999999985542111100 111111111  23456899999999999999


Q ss_pred             CcccC
Q 046297          296 FEEAK  300 (331)
Q Consensus       296 ~~~~~  300 (331)
                      .|.+.
T Consensus       228 ~P~~v  232 (246)
T COG4221         228 QPQHV  232 (246)
T ss_pred             CCCcc
Confidence            98743

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-21  Score=173.25  Aligned_cols=212  Identities=18%  Similarity=0.146  Sum_probs=148.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|++++.+.+       ..++.++.+|+.|++++.++++       
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999  99999999987654432       2347789999999999888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+|||++|......      ....+...   .....++|+.+    ++.+++++++.+.++||++||..+..+..+  
T Consensus        81 ~~d~vi~~a~~~~~~~------~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--  149 (258)
T PRK12429         81 GVDILVNNAGIQHVAP------IEDFPTEK---WKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG--  149 (258)
T ss_pred             CCCEEEECCCCCCCCC------hhhCCHHH---HHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC--
Confidence            5899999998643211      01111111   12233677777    566666677778899999999866543322  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhc--cCCc------cc--cCCcccccCH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLV--GKDD------EL--LQTETRTIAR  283 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~--~~~~------~~--~~~~~~~i~v  283 (331)
                         .+.|..+|...+.+.+       ..+++++++|||+++++...  ......  +...      .+  ......++++
T Consensus       150 ---~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (258)
T PRK12429        150 ---KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTV  226 (258)
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCH
Confidence               2458888888776554       35799999999999987532  111100  0000      00  0123568999


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+|++++.++....  ..|+.|++.+
T Consensus       227 ~d~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        227 EEIADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             HHHHHHHHHHcCccccCccCCeEEeCC
Confidence            999999999987643  4578899886

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.88  E-value=1.7e-21  Score=171.15  Aligned_cols=211  Identities=18%  Similarity=0.159  Sum_probs=148.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c---CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I---GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++|+||||+|++|+++++.|+++  |++|++++|+.++...    +   ...+.++.+|+.|++.+.++++      
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            34678999999999999999999999  9999999998654332    2   2247889999999998888875      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCC-CCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGT-NLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~-~~~~~  220 (331)
                       .+|+|||++|......  +......++       ....+.|+.+..++++++    ++.+.++||++||..+. .....
T Consensus        82 ~~~d~vi~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~  152 (251)
T PRK12826         82 GRLDILVANAGIFPLTP--FAEMDDEQW-------ERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPG  152 (251)
T ss_pred             CCCCEEEECCCCCCCCC--hhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCC
Confidence             6899999998754310  111111122       223478888888888776    45567899999998765 22211


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccC-CccccCCcccccCHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGK-DDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~-~~~~~~~~~~~i~v~Dva~~~  290 (331)
                           ...|+.+|..++.+++       ..+++++++|||+++++.....  ...... ....+  ...+++++|+|+++
T Consensus       153 -----~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~  225 (251)
T PRK12826        153 -----LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIP--LGRLGEPEDIAAAV  225 (251)
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCC--CCCCcCHHHHHHHH
Confidence                 1459999988877665       3589999999999999853211  000000 00011  12568999999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++..+.  ..|++|++.+
T Consensus       226 ~~l~~~~~~~~~g~~~~~~~  245 (251)
T PRK12826        226 LFLASDEARYITGQTLPVDG  245 (251)
T ss_pred             HHHhCccccCcCCcEEEECC
Confidence            99887653  3589999986

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-21  Score=174.21  Aligned_cols=210  Identities=19%  Similarity=0.148  Sum_probs=145.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC----CCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG----GADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~----~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      +++||||||+|+||++++++|+++  |++|++++|++++...+.    .++.++.+|++|++.+.++++       ++|+
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            578999999999999999999999  999999999987655432    247788999999998887776       5899


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      ||||||......  .......++       ...+++|+.++.++++++    ++.+.++||++||..+.....+     .
T Consensus        82 vv~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~-----~  147 (277)
T PRK06180         82 LVNNAGYGHEGA--IEESPLAEM-------RRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPG-----I  147 (277)
T ss_pred             EEECCCccCCcc--cccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCC-----c
Confidence            999999743210  001111111       223488999998888875    4456679999999876543322     2


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--h---hhccCC--------ccccCCcccccCHHHH
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--E---LLVGKD--------DELLQTETRTIARADV  286 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~---~~~~~~--------~~~~~~~~~~i~v~Dv  286 (331)
                      ..|..+|..+|.+.+       .++++++++|||++.++.....  .   ......        ......+..+.+++|+
T Consensus       148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  227 (277)
T PRK06180        148 GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKA  227 (277)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHH
Confidence            469999998887654       2589999999999977532100  0   000000        0001123446789999


Q ss_pred             HHHHHHHhcCcccCCceEEecc
Q 046297          287 AEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      |++++.+++.+... ..|.++.
T Consensus       228 a~~~~~~l~~~~~~-~~~~~g~  248 (277)
T PRK06180        228 AQAILAAVESDEPP-LHLLLGS  248 (277)
T ss_pred             HHHHHHHHcCCCCC-eeEeccH
Confidence            99999999876543 3455543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.87  E-value=3.7e-21  Score=169.47  Aligned_cols=210  Identities=19%  Similarity=0.124  Sum_probs=145.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHh-------cCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAI-------QGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l-------~~~  148 (331)
                      ++||||||+|+||+++++.|+++  |++|++++|+++..+.+       ..++.++.+|+.|++++.+++       .++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999  99999999987654332       235788999999999665544       468


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+|||++|......      ....+.   ++...+.+.|+.++..+++++    ++.++++||++||..+..+...    
T Consensus        80 d~vi~~a~~~~~~~------~~~~~~---~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~----  146 (255)
T TIGR01963        80 DILVNNAGIQHVAP------IEEFPP---EDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF----  146 (255)
T ss_pred             CEEEECCCCCCCCC------cccCCH---HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC----
Confidence            99999998643211      001111   111233367888876666655    6677889999999765433221    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccCCcc--------c--cCCcccccCHHH
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGKDDE--------L--LQTETRTIARAD  285 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~--------~--~~~~~~~i~v~D  285 (331)
                       ...|..+|..++.+.+       ..+++++++||++++++...  +..........        +  ......+++++|
T Consensus       147 -~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  225 (255)
T TIGR01963       147 -KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE  225 (255)
T ss_pred             -CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence             1458899988776664       24899999999999987521  11111111000        0  112356899999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|++++.++.++.  ..|+.|++.+
T Consensus       226 ~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       226 VAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             HHHHHHHHcCccccCccceEEEEcC
Confidence            9999999998642  4578999987

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.9e-21  Score=174.02  Aligned_cols=217  Identities=17%  Similarity=0.148  Sum_probs=147.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .++++|||||+|+||+++++.|+++  |++|++++|+++..+.+         ...+.++.+|++|++++.+ ++     
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~   78 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE   78 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence            3567999999999999999999999  99999999987654322         1347889999999988765 43     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||+|......  .......+++.       ..++|+.++..++++    +++.+.++||++||..+.....+
T Consensus        79 ~~~id~vv~~ag~~~~~~--~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~  149 (280)
T PRK06914         79 IGRIDLLVNNAGYANGGF--VEEIPVEEYRK-------QFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG  149 (280)
T ss_pred             cCCeeEEEECCcccccCc--cccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC
Confidence              5799999998644311  11111122222       236888887777766    46667789999999765433222


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh----hccCC-----------ccccCCcc
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL----LVGKD-----------DELLQTET  278 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~----~~~~~-----------~~~~~~~~  278 (331)
                      .     ..|+.+|...+.+.+       ..+++++++|||.+.++.......    .....           ..+.....
T Consensus       150 ~-----~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (280)
T PRK06914        150 L-----SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSD  224 (280)
T ss_pred             C-----chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhh
Confidence            2     458899999887665       358999999999998874211000    00000           00011123


Q ss_pred             cccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHH
Q 046297          279 RTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTK  318 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~  318 (331)
                      .+++++|+|++++.+++++... ..|++++   +..+++.
T Consensus       225 ~~~~~~dva~~~~~~~~~~~~~-~~~~~~~---~~~~~~~  260 (280)
T PRK06914        225 TFGNPIDVANLIVEIAESKRPK-LRYPIGK---GVKLMIL  260 (280)
T ss_pred             ccCCHHHHHHHHHHHHcCCCCC-cccccCC---chHHHHH
Confidence            5689999999999999987654 5788886   4444433

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.87  E-value=1.9e-21  Score=168.52  Aligned_cols=199  Identities=23%  Similarity=0.251  Sum_probs=150.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--------CCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--------ADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--------~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++++|||||++||..+++.|.++  ||+|+++.|+.+++.++..        +++++.+|+++++++.++.+     
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARR--GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            45789999999999999999999999  9999999999998877543        26799999999999888774     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHH----HHHHHHHHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQ----KNQIDAAKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~----~~ll~aa~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        .+|++|||||.....  .+.       +..+++..++.++|+.+.    +.++.-+.+.+-.+||.++|..++.+. |
T Consensus        82 ~~~IdvLVNNAG~g~~g--~f~-------~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~-p  151 (265)
T COG0300          82 GGPIDVLVNNAGFGTFG--PFL-------ELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT-P  151 (265)
T ss_pred             CCcccEEEECCCcCCcc--chh-------hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-c
Confidence              599999999985443  222       333444455558998874    556666777788899999999886555 3


Q ss_pred             CCCCCcchHHHHHHHHHHH-------HHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQY-------LADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~-------~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      ..    ..|+++|..+-.+       ++..|+.++.+.||.+..+... .   .+...........+.+.+|+|+..+.+
T Consensus       152 ~~----avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~---~~~~~~~~~~~~~~~~~~~va~~~~~~  223 (265)
T COG0300         152 YM----AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A---KGSDVYLLSPGELVLSPEDVAEAALKA  223 (265)
T ss_pred             ch----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c---cccccccccchhhccCHHHHHHHHHHH
Confidence            22    5699999885432       3468999999999999887643 1   111111112245678999999999999


Q ss_pred             hcCcc
Q 046297          294 LQFEE  298 (331)
Q Consensus       294 l~~~~  298 (331)
                      +...+
T Consensus       224 l~~~k  228 (265)
T COG0300         224 LEKGK  228 (265)
T ss_pred             HhcCC
Confidence            98753

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=1.7e-21  Score=170.54  Aligned_cols=211  Identities=18%  Similarity=0.133  Sum_probs=147.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++||||||+|+||+++++.|+++  |++|+++.|++++.+.+       ..++.++.+|+.|++.+.++++      
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34578999999999999999999999  99999999987654332       2347788999999998877775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       .+|+|||++|......  .......++       ....+.|+.+..++++++    .+.++++||++||..+.....+.
T Consensus        81 ~~id~vi~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~  151 (246)
T PRK05653         81 GALDILVNNAGITRDAL--LPRMSEEDW-------DRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQ  151 (246)
T ss_pred             CCCCEEEECCCcCCCCC--hhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCC
Confidence             4699999998643311  000111111       223377888888887776    45678899999998654432222


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hh-hhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RE-LLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                           ..|..+|...+.+.+       +.+++++++|||.++++.... .. ........++  ...+++++|+++++..
T Consensus       152 -----~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~  224 (246)
T PRK05653        152 -----TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIP--LGRLGQPEEVANAVAF  224 (246)
T ss_pred             -----cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCC--CCCCcCHHHHHHHHHH
Confidence                 458888987765544       358999999999999886531 11 1111111111  2446889999999999


Q ss_pred             HhcCc--ccCCceEEecc
Q 046297          293 ALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~--~~~~~~~~i~~  308 (331)
                      ++...  ...++.|++.+
T Consensus       225 ~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        225 LASDAASYITGQVIPVNG  242 (246)
T ss_pred             HcCchhcCccCCEEEeCC
Confidence            98753  24678999987

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.87  E-value=9.6e-21  Score=203.26  Aligned_cols=227  Identities=18%  Similarity=0.205  Sum_probs=164.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcC--CCCeEEEEecCCchhhh---c--------------CCCCcEEEccCCCc----
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERS--EQYAARGLVRTEESKQK---I--------------GGADDLFIGDIRDS----  138 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~--~g~~V~~l~R~~~~~~~---l--------------~~~~~~v~~Dl~d~----  138 (331)
                      .++|+||||+||+|+++++.|++++  ..++|+++.|.......   +              ..+++++.+|+.++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999982  13899999997543211   1              13588999999744    


Q ss_pred             --ccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC
Q 046297          139 --NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       139 --~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~  216 (331)
                        +.+.++.+++|+|||+|+....          ..|...      ....|+.|+.+++++|++.++++|+|+||.+++.
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~----------~~~~~~------~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHW----------VYPYSK------LRDANVIGTINVLNLCAEGKAKQFSFVSSTSALD 1114 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecC----------ccCHHH------HHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecC
Confidence              4567777899999999986432          111111      1256999999999999999999999999986542


Q ss_pred             C--------------------CCCCC---CCCcchHHHHHHHHHHHHHh---cCCCEEEEecCcccCCCcc--------h
Q 046297          217 L--------------------NHPLN---SLGNGNILVWKRKAEQYLAD---SGIPYTIIRAGGLQDKEGG--------I  262 (331)
Q Consensus       217 ~--------------------~~~~~---~~~~~~y~~sK~~~e~~~~~---~~~~~~ilrp~~v~g~~~~--------~  262 (331)
                      .                    ..+..   ....+.|+.+|+.+|.++..   .|++++++|||.++|+...        +
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~ 1194 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFL 1194 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHH
Confidence            1                    00000   01125699999999998864   5899999999999997532        1


Q ss_pred             hhhhccC--Cccc--cCCcccccCHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCCHHHHHHHHHHh
Q 046297          263 RELLVGK--DDEL--LQTETRTIARADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTPTKDFKALFSQI  327 (331)
Q Consensus       263 ~~~~~~~--~~~~--~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~~~~~  327 (331)
                      ..++.+.  ...+  ....+++++++|++++++.++..+.  ..+.+||+++   +..+++.++++.+.+.
T Consensus      1195 ~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1195 LRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTG---HPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             HHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCC---CCCCcHHHHHHHHHHh
Confidence            1122111  0111  2345889999999999999987653  2346899998   7889999999988754

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK06182 short chain dehydrogenase; Validated

Probab=99.86  E-value=8.7e-21  Score=169.14  Aligned_cols=211  Identities=19%  Similarity=0.224  Sum_probs=147.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      .+++|+||||+|+||++++++|+++  |++|++++|++++.+++. .++.++.+|++|++++.++++       ++|+||
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4678999999999999999999999  999999999987766543 358899999999999888876       689999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||+|.....  .+......+++..       +++|+.+    ++.+++.+++.+.++||++||.++......     ...
T Consensus        80 ~~ag~~~~~--~~~~~~~~~~~~~-------~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~-----~~~  145 (273)
T PRK06182         80 NNAGYGSYG--AIEDVPIDEARRQ-------FEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPL-----GAW  145 (273)
T ss_pred             ECCCcCCCC--chhhCCHHHHHHH-------HhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCC-----ccH
Confidence            999974321  1111122223333       3788877    456666777778889999999865332211     135


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hhhhccCCc--c-----------cc--CCcccccCHHH
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RELLVGKDD--E-----------LL--QTETRTIARAD  285 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~~~~~~~~--~-----------~~--~~~~~~i~v~D  285 (331)
                      |..+|...+.+.+       ..++++++++||++.++.... ...+.....  .           +.  .....+.+++|
T Consensus       146 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (273)
T PRK06182        146 YHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSV  225 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence            9999999887643       468999999999998875321 111111000  0           00  01234579999


Q ss_pred             HHHHHHHHhcCcccCCceEEecc
Q 046297          286 VAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      +|++++.++..... ...|+++.
T Consensus       226 vA~~i~~~~~~~~~-~~~~~~g~  247 (273)
T PRK06182        226 IADAISKAVTARRP-KTRYAVGF  247 (273)
T ss_pred             HHHHHHHHHhCCCC-CceeecCc
Confidence            99999999986432 34677664

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.86  E-value=5.6e-21  Score=168.82  Aligned_cols=216  Identities=16%  Similarity=0.130  Sum_probs=151.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .++++|||||+|+||+++++.|+++  |++|++++|+.++.++    +...+.++.+|++|++++.++++       ++|
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3578999999999999999999999  9999999999876544    23357889999999999887775       589


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C-CCeEEEEccCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G-AKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      +|||++|.....  .+.....++++..+       ++|+.+..++++++...    + -.+||++||..+..+..+.   
T Consensus        83 ~li~~ag~~~~~--~~~~~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  150 (257)
T PRK07067         83 ILFNNAALFDMA--PILDISRDSYDRLF-------AVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALV---  150 (257)
T ss_pred             EEEECCCcCCCC--CcccCCHHHHHHHH-------HhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCC---
Confidence            999999964321  11122222333333       88999999999887543    1 2479999997653332222   


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hhhhcc-------CCccccC---CcccccCHHHH
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RELLVG-------KDDELLQ---TETRTIARADV  286 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~~~~~-------~~~~~~~---~~~~~i~v~Dv  286 (331)
                        ..|+.+|...+.+.+       ..++++++++||+++++.... ......       .......   ....+.+++|+
T Consensus       151 --~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  228 (257)
T PRK07067        151 --SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDL  228 (257)
T ss_pred             --chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHH
Confidence              458899998877654       368999999999999874221 110000       0000000   12457899999


Q ss_pred             HHHHHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          287 AEVCIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      |++++.++..+.  ..|++|++.+   |+..
T Consensus       229 a~~~~~l~s~~~~~~~g~~~~v~g---g~~~  256 (257)
T PRK07067        229 TGMALFLASADADYIVAQTYNVDG---GNWM  256 (257)
T ss_pred             HHHHHHHhCcccccccCcEEeecC---CEeC
Confidence            999999987653  4678999987   6543

>PRK09135 pteridine reductase; Provisional

Probab=99.86  E-value=8.2e-21  Score=166.62  Aligned_cols=216  Identities=15%  Similarity=0.102  Sum_probs=144.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhc--------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKI--------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l--------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ..++||||||+|+||++++++|+++  |++|++++|+.++ .+.+        ...+.++.+|++|.+.+.++++     
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999  9999999997432 2221        1247789999999998888776     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~  221 (331)
                        ++|+|||++|......  +......+++.       ..++|+.++.++++++...   .-..++.+++.....   |.
T Consensus        83 ~~~~d~vi~~ag~~~~~~--~~~~~~~~~~~-------~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~  150 (249)
T PRK09135         83 FGRLDALVNNASSFYPTP--LGSITEAQWDD-------LFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAER---PL  150 (249)
T ss_pred             cCCCCEEEECCCCCCCCC--hhhCCHHHHHH-------HHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcC---CC
Confidence              4799999999643210  11111122333       3388999999999998642   223677666644322   22


Q ss_pred             CCCCcchHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      ++.  ..|+.+|..+|.+++.      .+++++++|||+++++....  .......... ......+.+++|+|+++..+
T Consensus       151 ~~~--~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~~~~~~  227 (249)
T PRK09135        151 KGY--PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILA-RTPLKRIGTPEDIAEAVRFL  227 (249)
T ss_pred             CCc--hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHh-cCCcCCCcCHHHHHHHHHHH
Confidence            222  4699999999987763      26899999999999986421  1110000000 00011234689999999766


Q ss_pred             hcCc-ccCCceEEeccCCCCCCCC
Q 046297          294 LQFE-EAKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       294 l~~~-~~~~~~~~i~~~~~~~~~t  316 (331)
                      +... ...|++|++++   ++.++
T Consensus       228 ~~~~~~~~g~~~~i~~---g~~~~  248 (249)
T PRK09135        228 LADASFITGQILAVDG---GRSLT  248 (249)
T ss_pred             cCccccccCcEEEECC---Ceecc
Confidence            6543 34688999998   66544

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.4e-21  Score=168.88  Aligned_cols=222  Identities=17%  Similarity=0.179  Sum_probs=157.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-CCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-GADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      +++++||||+|+||+++++.|+++  |++|++++|++++.+.+    . ..+.++++|+.|.+++.++++       ++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            467999999999999999999999  99999999987665432    1 247889999999999887775       489


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +|||++|......  +   ...+++. |   ....++|+.+..++++++    ++.+.++||++||..+....      +
T Consensus        80 ~vi~~ag~~~~~~--~---~~~~~~~-~---~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------~  144 (257)
T PRK07074         80 VLVANAGAARAAS--L---HDTTPAS-W---RADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL------G  144 (257)
T ss_pred             EEEECCCCCCCCC--h---hhCCHHH-H---HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC------C
Confidence            9999999743211  0   0011111 1   122367888877777766    44566789999997543211      1


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccc------cCCcccccCHHHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDEL------LQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~------~~~~~~~i~v~Dva~~~~~  292 (331)
                      ...|..+|...+.+.+       ..++++++++||++.++.....   ......+      .....++++++|++++++.
T Consensus       145 ~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  221 (257)
T PRK07074        145 HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEAR---VAANPQVFEELKKWYPLQDFATPDDVANAVLF  221 (257)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcc---cccChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            2358899998887665       2479999999999988753210   0000000      0113568999999999999


Q ss_pred             HhcCc--ccCCceEEeccCCCCCCCCHHHHHHHHHH
Q 046297          293 ALQFE--EAKFKAFDLASKPEGTGTPTKDFKALFSQ  326 (331)
Q Consensus       293 ~l~~~--~~~~~~~~i~~~~~~~~~t~~e~~~~~~~  326 (331)
                      ++.+.  ...|+.+++.+   |......|+.+.+.+
T Consensus       222 l~~~~~~~~~g~~~~~~~---g~~~~~~~~~~~~~~  254 (257)
T PRK07074        222 LASPAARAITGVCLPVDG---GLTAGNREMARTLTL  254 (257)
T ss_pred             HcCchhcCcCCcEEEeCC---CcCcCChhhhhhhcc
Confidence            99753  24578899988   899999999988754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=3.8e-21  Score=169.71  Aligned_cols=216  Identities=13%  Similarity=0.049  Sum_probs=150.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C---CCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G---GADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~---~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|++++.+.+    .   .++.++++|+.|++++.++++      
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45689999999999999999999999  99999999987654332    1   237788999999998888875      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+|||++|.....  .+.....+       ...+..++|+.++.++++++.+    .+.++||++||..+..+... 
T Consensus        86 ~~~d~li~~ag~~~~~--~~~~~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-  155 (255)
T PRK07523         86 GPIDILVNNAGMQFRT--PLEDFPAD-------AFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG-  155 (255)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHH-------HHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC-
Confidence             489999999974321  01111111       1123347899998888887754    36779999999865332221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ...|+.+|...+.+.+       .+|++++++|||++.++.....    ..........+  ...+..++|+|+++
T Consensus       156 ----~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~  229 (255)
T PRK07523        156 ----IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP--AGRWGKVEELVGAC  229 (255)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC--CCCCcCHHHHHHHH
Confidence                2459999999887765       4689999999999988753210    00000000011  13467899999999


Q ss_pred             HHHhcCcc--cCCceEEeccCCCCCCCC
Q 046297          291 IQALQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      +.++.++.  ..|+.+++.+   |...+
T Consensus       230 ~~l~~~~~~~~~G~~i~~~g---g~~~~  254 (255)
T PRK07523        230 VFLASDASSFVNGHVLYVDG---GITAS  254 (255)
T ss_pred             HHHcCchhcCccCcEEEECC---Ceecc
Confidence            99987643  3578899987   65433

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.4e-20  Score=164.09  Aligned_cols=204  Identities=17%  Similarity=0.109  Sum_probs=145.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c-CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I-GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l-~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      .+++||||||+|+||+++++.|+++  |++|++++|++++..+    + ....+++.+|+.|.+++.++++       ++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            3678999999999999999999999  9999999998755322    2 2347788999999998887775       58


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+|||++|......  ....   +++    ......+.|+.++.++++++.    +.++++||++||..++.+..+.   
T Consensus        84 d~vi~~ag~~~~~~--~~~~---~~~----~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  151 (239)
T PRK12828         84 DALVNIAGAFVWGT--IADG---DAD----TWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGM---  151 (239)
T ss_pred             CEEEECCcccCcCC--hhhC---CHH----HHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCc---
Confidence            99999998643210  0000   111    111223678888888777663    5678899999998765443222   


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                        ..|..+|...+.+++       +.+++++++|||+++++.....  .      .......+++++|+|++++.++.++
T Consensus       152 --~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--~------~~~~~~~~~~~~dva~~~~~~l~~~  221 (239)
T PRK12828        152 --GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--M------PDADFSRWVTPEQIAAVIAFLLSDE  221 (239)
T ss_pred             --chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--C------CchhhhcCCCHHHHHHHHHHHhCcc
Confidence              358889988766554       3589999999999998742111  0      0011234789999999999999865


Q ss_pred             c--cCCceEEecc
Q 046297          298 E--AKFKAFDLAS  308 (331)
Q Consensus       298 ~--~~~~~~~i~~  308 (331)
                      .  ..|+.+.+.+
T Consensus       222 ~~~~~g~~~~~~g  234 (239)
T PRK12828        222 AQAITGASIPVDG  234 (239)
T ss_pred             cccccceEEEecC
Confidence            3  4578888887

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.86  E-value=7.2e-20  Score=163.01  Aligned_cols=214  Identities=25%  Similarity=0.335  Sum_probs=166.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMK  162 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~  162 (331)
                      ++||||||||++|++++++|+++  |++|+++.|++++...+..+++++.+|+.+++.+..+++++|.++++.+... ..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~   77 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS   77 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc
Confidence            47999999999999999999999  9999999999988877777799999999999999999999999999988532 10


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH--cCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHH
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA--AGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYL  240 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~--~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  240 (331)
                                +        ..+....   ..+++.+++  .++++++++|..++.. ..+      ..|..+|...|+.+
T Consensus        78 ----------~--------~~~~~~~---~~~~~~a~~a~~~~~~~~~~s~~~~~~-~~~------~~~~~~~~~~e~~l  129 (275)
T COG0702          78 ----------D--------AFRAVQV---TAVVRAAEAAGAGVKHGVSLSVLGADA-ASP------SALARAKAAVEAAL  129 (275)
T ss_pred             ----------c--------chhHHHH---HHHHHHHHHhcCCceEEEEeccCCCCC-CCc------cHHHHHHHHHHHHH
Confidence                      0        0012233   334444444  4588999988887632 222      45899999999999


Q ss_pred             HhcCCCEEEEecCcccCCCc-chh-hhhccCCc--cccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCC
Q 046297          241 ADSGIPYTIIRAGGLQDKEG-GIR-ELLVGKDD--ELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       241 ~~~~~~~~ilrp~~v~g~~~-~~~-~~~~~~~~--~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t  316 (331)
                      ...+++++++|+..+|.... .+. ........  ..+....+++..+|++.++...+..+...+++|.+.+   ++..+
T Consensus       130 ~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g---~~~~~  206 (275)
T COG0702         130 RSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAG---PEALT  206 (275)
T ss_pred             HhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccC---Cceec
Confidence            99999999999666655443 322 22222211  1223357889999999999999998887889999999   78999


Q ss_pred             HHHHHHHHHHhhcc
Q 046297          317 TKDFKALFSQITTR  330 (331)
Q Consensus       317 ~~e~~~~~~~~~g~  330 (331)
                      ..++.+.+.+..||
T Consensus       207 ~~~~~~~l~~~~gr  220 (275)
T COG0702         207 LAELASGLDYTIGR  220 (275)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999998875

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=8.2e-21  Score=166.89  Aligned_cols=213  Identities=15%  Similarity=0.075  Sum_probs=145.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC------CCCcEEEccCCCcccHHHHhc-------C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG------GADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~------~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      .+++||||||+|+||+++++.|+++  |++|++++|++++.+.+.      ..+.++.+|+.|++++.++++       +
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999  999999999986654432      236799999999999988775       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|+|||++|......+ +......++       ....++|+.++..+++.+    ++.+.++||++||..+..+..+.  
T Consensus        82 ~d~vi~~ag~~~~~~~-~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  151 (251)
T PRK07231         82 VDILVNNAGTTHRNGP-LLDVDEAEF-------DRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGL--  151 (251)
T ss_pred             CCEEEECCCCCCCCCC-hhhCCHHHH-------HHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCc--
Confidence            7999999986433210 111111122       223478888766655554    45677899999998775543332  


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhh--ccCCccc-c-CCcccccCHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELL--VGKDDEL-L-QTETRTIARADVAEVCIQ  292 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~--~~~~~~~-~-~~~~~~i~v~Dva~~~~~  292 (331)
                         ..|..+|...+.+.+       ..+++++.++||++.++........  ......+ . .....+++++|+|++++.
T Consensus       152 ---~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  228 (251)
T PRK07231        152 ---GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALF  228 (251)
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence               458899988776654       2489999999999976542210000  0000000 0 112346899999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++..+.  ..|+.+.+.+
T Consensus       229 l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        229 LASDEASWITGVTLVVDG  246 (251)
T ss_pred             HhCccccCCCCCeEEECC
Confidence            997653  3467777765

>PRK09186 flagellin modification protein A; Provisional

Probab=99.86  E-value=1.4e-20  Score=165.96  Aligned_cols=214  Identities=16%  Similarity=0.086  Sum_probs=142.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------C-CCCcEEEccCCCcccHHHHhcC----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------G-GADDLFIGDIRDSNSIIPAIQG----  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~-~~~~~v~~Dl~d~~~~~~~l~~----  147 (331)
                      .+++||||||+|+||+++++.|+++  |++|+++.|++++.+++        . ..+.++++|+.|++++.++++.    
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            3688999999999999999999999  99999999987664332        1 1355779999999998888763    


Q ss_pred             ---CCEEEEcccCCCCCC-CCCCCCCCCCCccccccCCCcceehHHHH----HHHHHHHHHcCCCeEEEEccCCCCCCCC
Q 046297          148 ---IDALIILTSAVPKMK-PDFDPAKGGRPEFYFEEGAYPEQVDWIGQ----KNQIDAAKAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       148 ---~d~Vi~~ag~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~nv~~~----~~ll~aa~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         +|+|||||+...... ..+...+...+       ....++|+.+.    +.+++.+++.+.++||++||..+.....
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  153 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDF-------NENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK  153 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHH-------HHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc
Confidence               899999997532210 01111111112       22236666655    4455556666788999999976532111


Q ss_pred             -----CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hhhhhccCCccccCCcccccCHHHH
Q 046297          220 -----PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IRELLVGKDDELLQTETRTIARADV  286 (331)
Q Consensus       220 -----~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dv  286 (331)
                           .........|+.+|...+.+.+       ..++++++++||.++++... ........   .+  ...+++++|+
T Consensus       154 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~---~~--~~~~~~~~dv  228 (256)
T PRK09186        154 FEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKC---CN--GKGMLDPDDI  228 (256)
T ss_pred             chhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhc---CC--ccCCCCHHHh
Confidence                 0001111359999998887764       36899999999998876422 11111111   11  2346899999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |++++.++.+..  ..|+.+.+.+
T Consensus       229 a~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        229 CGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             hhhHhheeccccccccCceEEecC
Confidence            999999997653  3577777775

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.86  E-value=1.5e-20  Score=187.53  Aligned_cols=212  Identities=8%  Similarity=0.035  Sum_probs=148.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAV  158 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~  158 (331)
                      ..|+||||||+||||++|++.|.++  |++|..                 ..+|++|.+.+.+.++  ++|+|||+|+..
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~-----------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~  439 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQ--GIAYEY-----------------GKGRLEDRSSLLADIRNVKPTHVFNAAGVT  439 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhC--CCeEEe-----------------eccccccHHHHHHHHHhhCCCEEEECCccc
Confidence            4578999999999999999999999  998731                 1246778888888876  789999999975


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCC----CCCC-
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPL----NSLG-  225 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~----~~~~-  225 (331)
                      .....   .....+|+..+       ++|+.++.+++++|++.|+++ |++||.+++.-        ..|.    .+.. 
T Consensus       440 ~~~~~---~~~~~~~~~~~-------~~N~~gt~~l~~a~~~~g~~~-v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~  508 (668)
T PLN02260        440 GRPNV---DWCESHKVETI-------RANVVGTLTLADVCRENGLLM-MNFATGCIFEYDAKHPEGSGIGFKEEDKPNFT  508 (668)
T ss_pred             CCCCC---ChHHhCHHHHH-------HHHhHHHHHHHHHHHHcCCeE-EEEcccceecCCcccccccCCCCCcCCCCCCC
Confidence            32100   01123444444       899999999999999999965 55566543220        0111    1112 


Q ss_pred             cchHHHHHHHHHHHHHhcCCCEEEEecCcccCCC----cchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCC
Q 046297          226 NGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKE----GGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKF  301 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~----~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~  301 (331)
                      .+.|+.+|..+|++++.+ .++.++|+.++|+..    .++...+......+ .-+.+...++|++.+++.+++.+ . +
T Consensus       509 ~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~-~vp~~~~~~~~~~~~~~~l~~~~-~-~  584 (668)
T PLN02260        509 GSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVV-NIPNSMTVLDELLPISIEMAKRN-L-R  584 (668)
T ss_pred             CChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceee-ccCCCceehhhHHHHHHHHHHhC-C-C
Confidence            267999999999999887 477888888888642    23333333222221 11234577888998888888643 2 4


Q ss_pred             ceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          302 KAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       302 ~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      .+||+++   ++.+|+.|+++.+.+..+
T Consensus       585 giyni~~---~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        585 GIWNFTN---PGVVSHNEILEMYKDYID  609 (668)
T ss_pred             ceEEecC---CCcCcHHHHHHHHHHhcC
Confidence            6999999   889999999999988663

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.8e-20  Score=164.06  Aligned_cols=211  Identities=16%  Similarity=0.100  Sum_probs=145.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hh----hc---CCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQ----KI---GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~----~l---~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++|+||||+|+||+++++.|+++  |++|++++|+... ..    .+   ..++.++.+|++|++++.++++       
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            367999999999999999999999  9999999987532 11    11   2357899999999988877664       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-----C-----CCeEEEEccCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-----G-----AKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-----~-----vk~~v~~SS~~~~~  216 (331)
                      ++|+||||+|........+.......++..       .++|+.++.++++++...     +     +++||++||..+..
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  152 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRV-------LAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM  152 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHH-------HHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc
Confidence            689999999874332111111222223333       388999998888876432     1     56799999987644


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hhhhccCC--ccccCCcccccCHHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RELLVGKD--DELLQTETRTIARADV  286 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~~~~~~~--~~~~~~~~~~i~v~Dv  286 (331)
                      +..+.     ..|+.+|..+|.+++       .+++++++++||.+.++.... ........  ...+  ...+.+++|+
T Consensus       153 ~~~~~-----~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~  225 (256)
T PRK12745        153 VSPNR-----GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVP--MPRWGEPEDV  225 (256)
T ss_pred             CCCCC-----cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCC--cCCCcCHHHH
Confidence            33322     458899999887655       368999999999998865321 00000000  0011  1246789999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++..++....  ..|+.|++.+
T Consensus       226 a~~i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        226 ARAVAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             HHHHHHHhCCcccccCCCEEEECC
Confidence            999998886542  3578999987

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.1e-20  Score=164.96  Aligned_cols=226  Identities=14%  Similarity=0.134  Sum_probs=152.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++.+|+++..+++       ...+.++.+|++|++++.++++      
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45688999999999999999999999  99999999987655432       1236788999999999887775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~~~~  220 (331)
                       ++|+||||||.....  .+......++       ...+++|+.+..++++++.    +.+ .++||++||..+..+..+
T Consensus        82 g~id~li~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~  152 (275)
T PRK05876         82 GHVDVVFSNAGIVVGG--PIVEMTHDDW-------RWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG  152 (275)
T ss_pred             CCCCEEEECCCcCCCC--CcccCCHHHH-------HHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCC
Confidence             479999999974321  1111111122       2334889998888777764    444 468999999876543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhcc----C--Ccccc---CCcccccCHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVG----K--DDELL---QTETRTIARA  284 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~----~--~~~~~---~~~~~~i~v~  284 (331)
                      .     ..|+.+|..++.+.+       ..++++++++||++.++...-......    .  .....   .....+++++
T Consensus       153 ~-----~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (275)
T PRK05876        153 L-----GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVD  227 (275)
T ss_pred             C-----chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHH
Confidence            2     458999987544332       358999999999998774321111110    0  00011   1234578999


Q ss_pred             HHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          285 DVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       285 Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |+|+.++.++..+    +.+.+.+     +....++.+.+.++...
T Consensus       228 dva~~~~~ai~~~----~~~~~~~-----~~~~~~~~~~~~~~~~~  264 (275)
T PRK05876        228 DIAQLTADAILAN----RLYVLPH-----AASRASIRRRFERIDRT  264 (275)
T ss_pred             HHHHHHHHHHHcC----CeEEecC-----hhhHHHHHHHHHHHHHh
Confidence            9999999999754    3454543     24567777777666543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.8e-20  Score=165.96  Aligned_cols=214  Identities=18%  Similarity=0.106  Sum_probs=146.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---C--CCcEEEccCCCcccHHHHhc-------C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---G--ADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~--~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +.++++|||||+|+||+++++.|+++  |++|++++|+++..+.+.   .  ++.++.+|+.|++.+.++++       +
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999  999999999876544321   1  35789999999998887764       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCC-CeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGA-KQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v-k~~v~~SS~~~~~~~~~~~  222 (331)
                      +|+|||++|....... .......++.       ...+.|+.++..+++++    ++.+. ++|+++||..+.....+. 
T Consensus        87 ~d~vi~~ag~~~~~~~-~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~-  157 (264)
T PRK12829         87 LDVLVNNAGIAGPTGG-IDEITPEQWE-------QTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGR-  157 (264)
T ss_pred             CCEEEECCCCCCCCCC-cccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCC-
Confidence            8999999997532211 0011111222       33378899988887776    33444 678888876643322221 


Q ss_pred             CCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchhhhh----ccCCc-c-----cc-CCcccccCHH
Q 046297          223 SLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIRELL----VGKDD-E-----LL-QTETRTIARA  284 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~~~~----~~~~~-~-----~~-~~~~~~i~v~  284 (331)
                          ..|+.+|...|.+++.       .+++++++|||+++++........    .+... .     .. -....+++++
T Consensus       158 ----~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (264)
T PRK12829        158 ----TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPE  233 (264)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHH
Confidence                3588999998877652       489999999999998764211000    00000 0     00 0123479999


Q ss_pred             HHHHHHHHHhcCc--ccCCceEEecc
Q 046297          285 DVAEVCIQALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       285 Dva~~~~~~l~~~--~~~~~~~~i~~  308 (331)
                      |+|+++..++...  ...|+.|++.+
T Consensus       234 d~a~~~~~l~~~~~~~~~g~~~~i~~  259 (264)
T PRK12829        234 DIAATALFLASPAARYITGQAISVDG  259 (264)
T ss_pred             HHHHHHHHHcCccccCccCcEEEeCC
Confidence            9999999888643  24678999987

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.4e-20  Score=167.95  Aligned_cols=212  Identities=16%  Similarity=0.141  Sum_probs=145.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..+++++||||+|+||+++++.|+++  |++|+++.|+.+...++       ..++.++.+|++|++++.++++      
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            34578999999999999999999999  99999999986554332       2346788999999999887775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||+|......  ....       ..++....+++|+.++.++++++.    +.+..+||++||..++.+..+ 
T Consensus        86 ~~id~vi~~Ag~~~~~~--~~~~-------~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~-  155 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGK--LHEI-------STEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH-  155 (274)
T ss_pred             CCCCEEEECCCcCCCcc--cccC-------CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC-
Confidence             5799999998643210  0011       111112334788998888877764    345668999999876543322 


Q ss_pred             CCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcc-h-----hhhhccCCccccCCcccccCHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGG-I-----RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~-~-----~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                          ...|..+|...|.+.+.       .+++++++|||.+.++... .     ..........-......+++++|+|+
T Consensus       156 ----~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (274)
T PRK07775        156 ----MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLAR  231 (274)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHH
Confidence                14599999999877752       3899999999988655321 0     00000000000111245799999999


Q ss_pred             HHHHHhcCcccCCceEEecc
Q 046297          289 VCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~  308 (331)
                      +++.+++.+. .+.+||+.-
T Consensus       232 a~~~~~~~~~-~~~~~~~~~  250 (274)
T PRK07775        232 AITFVAETPR-GAHVVNMEV  250 (274)
T ss_pred             HHHHHhcCCC-CCCeeEEee
Confidence            9999998764 345788764

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-20  Score=165.99  Aligned_cols=213  Identities=18%  Similarity=0.124  Sum_probs=148.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ++++|+||||+|+||++++++|+++  |++|++++|+++..+.+       ..++.++.+|++|.+++.++++       
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999  99999999987554332       1246788999999988877664       


Q ss_pred             CCCEEEEcccCCCCCCC-CCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----CCCeEEEEccCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKP-DFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~vk~~v~~SS~~~~~~~~~~  221 (331)
                      ++|+||||+|....... .+...+..+++       ...++|+.++.++++++...    +.++||++||..++...   
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  152 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYK-------KFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS---  152 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHH-------HHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc---
Confidence            58999999997543211 11111222222       33488999998888877643    45799999998765321   


Q ss_pred             CCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchh---hhhccCCccccCCcccccCHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIR---ELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                           +.|+.+|...|.+.+.       .++++++++||.+.++.....   .........++  ...+.+++|++++++
T Consensus       153 -----~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~a~~~~  225 (250)
T PRK07774        153 -----NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIP--LSRMGTPEDLVGMCL  225 (250)
T ss_pred             -----cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCC--CCCCcCHHHHHHHHH
Confidence                 4599999998877652       478999999999987653210   00000000011  112467899999999


Q ss_pred             HHhcCcc--cCCceEEeccCCCCCCC
Q 046297          292 QALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      .++....  ..|++|++.+   ++..
T Consensus       226 ~~~~~~~~~~~g~~~~v~~---g~~~  248 (250)
T PRK07774        226 FLLSDEASWITGQIFNVDG---GQII  248 (250)
T ss_pred             HHhChhhhCcCCCEEEECC---Ceec
Confidence            9987643  4678999998   6543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.85  E-value=5e-20  Score=147.38  Aligned_cols=201  Identities=19%  Similarity=0.246  Sum_probs=156.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMK  162 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~  162 (331)
                      |||.|+||+|.+|++|+++++++  ||+|++++|++++.... +.+.+++.|+.|++.+.+.+.+.|+||..-+..... 
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K~~~~-~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~-   76 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASKLAAR-QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASD-   76 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHhcccc-ccceeecccccChhhhHhhhcCCceEEEeccCCCCC-
Confidence            68999999999999999999999  99999999999987766 458899999999999999999999999998864211 


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC--CCC---CCCCCCcchHHHHHHHHH
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN--LNH---PLNSLGNGNILVWKRKAE  237 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~--~~~---~~~~~~~~~y~~sK~~~e  237 (331)
                                +          ........+.+++..+..++.|++.++.++...  +..   ..+.++.-.|...+..+|
T Consensus        77 ----------~----------~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae  136 (211)
T COG2910          77 ----------N----------DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAE  136 (211)
T ss_pred             ----------h----------hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHH
Confidence                      0          022455577888999999999999999987422  211   011122122445566666


Q ss_pred             --HHHH-hcCCCEEEEecCcccCCCcchhhhhccCCccccC-CcccccCHHHHHHHHHHHhcCcccCCceEEec
Q 046297          238 --QYLA-DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQ-TETRTIARADVAEVCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       238 --~~~~-~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~  307 (331)
                        +.|+ +..++||.+.|..++.|+....+...|....+.+ .+-++|+..|.|-+++..++++.+..+.|.+.
T Consensus       137 ~L~~Lr~~~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         137 FLDSLRAEKSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             HHHHHhhccCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence              4454 4569999999999999977766666666555544 45689999999999999999999888888775

>PLN02253 xanthoxin dehydrogenase

Probab=99.85  E-value=2.1e-20  Score=167.32  Aligned_cols=222  Identities=14%  Similarity=0.053  Sum_probs=150.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC--CCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG--GADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~--~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|+++..++    +.  .++.++++|++|++.+.++++       
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            34678999999999999999999999  9999999998654432    22  247889999999999888776       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||........+...+.++++..       +++|+.++.++++++..    .+-.++|++||..+......  
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~-------~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--  164 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKV-------FDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG--  164 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHH-------HhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC--
Confidence            689999999975332111222223333333       48999999888877653    33458999998765332211  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--------hhhhccCCccccC---CcccccCHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--------RELLVGKDDELLQ---TETRTIARA  284 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--------~~~~~~~~~~~~~---~~~~~i~v~  284 (331)
                         ...|+.+|...|.+.+       ..++++++++||.+.++....        ...+.........   .....++++
T Consensus       165 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  241 (280)
T PLN02253        165 ---PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVD  241 (280)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHH
Confidence               1359999999887765       248999999999997763210        0000000000000   012247899


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEeccCCCCCCCCHH
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLASKPEGTGTPTK  318 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~  318 (331)
                      |+|++++.++..+.  ..|+.+++.+   |...+..
T Consensus       242 dva~~~~~l~s~~~~~i~G~~i~vdg---G~~~~~~  274 (280)
T PLN02253        242 DVANAVLFLASDEARYISGLNLMIDG---GFTCTNH  274 (280)
T ss_pred             HHHHHHHhhcCcccccccCcEEEECC---chhhccc
Confidence            99999999887643  3578888887   6544433

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.85  E-value=3.1e-20  Score=165.44  Aligned_cols=161  Identities=20%  Similarity=0.233  Sum_probs=125.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh---h--------------cCCCCcEEEccCC------Ccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ---K--------------IGGADDLFIGDIR------DSN  139 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~---~--------------l~~~~~~v~~Dl~------d~~  139 (331)
                      ++||+||||||+|.+|+.+|+.+. ..+|++++|..+...   .              ...+++++.+|+.      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~-~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRS-DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            469999999999999999999985 369999999765221   1              1234899999998      456


Q ss_pred             cHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC
Q 046297          140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       140 ~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~  219 (331)
                      ++.++.+.+|.|||+++......                ...+....|+.|+..+++.|.....|.|+|+||.++.....
T Consensus        80 ~~~~La~~vD~I~H~gA~Vn~v~----------------pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~  143 (382)
T COG3320          80 TWQELAENVDLIIHNAALVNHVF----------------PYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEY  143 (382)
T ss_pred             HHHHHhhhcceEEecchhhcccC----------------cHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccc
Confidence            78888888999999999755432                22334578999999999999998899999999997532211


Q ss_pred             CC------C-------C--CCcchHHHHHHHHHHHHHh---cCCCEEEEecCcccCCCc
Q 046297          220 PL------N-------S--LGNGNILVWKRKAEQYLAD---SGIPYTIIRAGGLQDKEG  260 (331)
Q Consensus       220 ~~------~-------~--~~~~~y~~sK~~~e~~~~~---~~~~~~ilrp~~v~g~~~  260 (331)
                      +.      .       .  ...++|..|||.+|.++++   .|++++|+|||+|.|+..
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         144 YSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence            10      0       0  1117899999999999984   589999999999999764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=2.4e-20  Score=163.95  Aligned_cols=210  Identities=16%  Similarity=0.151  Sum_probs=144.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhhh-------cCCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQK-------IGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++++||||+|+||++++++|+++  |++|++ +.|+.++.++       ...++.++.+|++|++++.++++      
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999  999876 4776654332       12347889999999998888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+|||++|......  +    +..+...   .....++|+.++..+++++.+    .+.++||++||.....+..+.
T Consensus        81 ~~id~vi~~ag~~~~~~--~----~~~~~~~---~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  151 (250)
T PRK08063         81 GRLDVFVNNAASGVLRP--A----MELEESH---WDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENY  151 (250)
T ss_pred             CCCCEEEECCCCCCCCC--c----ccCCHHH---HHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc
Confidence             5899999998643210  0    1111111   112336888888777776654    456799999998654432222


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                           ..|+.+|..+|.+.+       ..++++++++||++..+....    ...........+  ...+++++|+|+++
T Consensus       152 -----~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~  224 (250)
T PRK08063        152 -----TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP--AGRMVEPEDVANAV  224 (250)
T ss_pred             -----cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC--CCCCcCHHHHHHHH
Confidence                 459999999998765       368999999999997764210    001000000011  12368999999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.++.  ..|+.+++.+
T Consensus       225 ~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        225 LFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             HHHcCchhcCccCCEEEECC
Confidence            99997653  3578888887

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.7e-20  Score=165.46  Aligned_cols=209  Identities=17%  Similarity=0.181  Sum_probs=144.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc--------CCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ--------GIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~--------~~d~Vi  152 (331)
                      +++|+||||+|+||+++++.|+++  |++|++++|+++..+.+.. .++++.+|++|++++.++++        ++|+||
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            468999999999999999999999  9999999999877665533 57889999999988877664        479999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||||......  +.....+++       ....++|+.|    ++.+++.+++.+.++||++||..+..+..+.     ..
T Consensus        82 ~~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~-----~~  147 (277)
T PRK05993         82 NNGAYGQPGA--VEDLPTEAL-------RAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYR-----GA  147 (277)
T ss_pred             ECCCcCCCCC--cccCCHHHH-------HHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCcc-----ch
Confidence            9998643211  111111111       2334889888    6677888888888899999998765433222     46


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hh----hhccCCc-----------cc---cCCcccccC
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RE----LLVGKDD-----------EL---LQTETRTIA  282 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~----~~~~~~~-----------~~---~~~~~~~i~  282 (331)
                      |+.+|...+.+.+       +.|+++++++||++..+.... ..    .......           .+   .......++
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLG  227 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCC
Confidence            9999999987754       478999999999997764221 00    0000000           00   001112368


Q ss_pred             HHHHHHHHHHHhcCcccCCceEEec
Q 046297          283 RADVAEVCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~~~~~~~~i~  307 (331)
                      ++++|+.++.+++.+... ..|.++
T Consensus       228 ~~~va~~i~~a~~~~~~~-~~~~~~  251 (277)
T PRK05993        228 PEAVYAVLLHALTAPRPR-PHYRVT  251 (277)
T ss_pred             HHHHHHHHHHHHcCCCCC-CeeeeC
Confidence            999999999999876432 234444

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.85  E-value=4.5e-20  Score=162.23  Aligned_cols=199  Identities=18%  Similarity=0.157  Sum_probs=138.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      |+|+||||+|+||.++++.|+++  |++|++++|++++.+.+    ..++.++.+|+.|.+++.++++       ++|+|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57999999999999999999999  99999999998765543    3357889999999998877764       69999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      ||++|......+ .       ++...++...+.++|+.++..    +++++++.+.++||++||..+.....+     ..
T Consensus        79 i~~ag~~~~~~~-~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----~~  145 (248)
T PRK10538         79 VNNAGLALGLEP-A-------HKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG-----GN  145 (248)
T ss_pred             EECCCccCCCCC-c-------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC-----Cc
Confidence            999996422110 0       111112223334888888544    445556667789999999875432221     24


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCc---cccCCcccccCHHHHHHHHHHHhcCc
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDD---ELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      .|+.+|...+.+.+       ..++++++++||.+.+........ .+...   ..+ .+..++.++|+|++++.++..+
T Consensus       146 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~dvA~~~~~l~~~~  223 (248)
T PRK10538        146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF-KGDDGKAEKTY-QNTVALTPEDVSEAVWWVATLP  223 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhc-cCcHHHHHhhc-cccCCCCHHHHHHHHHHHhcCC
Confidence            69999999887664       257999999999998664321111 11110   011 1234679999999999999766


Q ss_pred             c
Q 046297          298 E  298 (331)
Q Consensus       298 ~  298 (331)
                      .
T Consensus       224 ~  224 (248)
T PRK10538        224 A  224 (248)
T ss_pred             C
Confidence            4

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=160.63  Aligned_cols=217  Identities=15%  Similarity=0.131  Sum_probs=147.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      +.+++||||||+|+||+++++.|+++  |++|++++|++..  .....+.++++|+.|++.+.++++       ++|+||
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPD--DLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhh--hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            44688999999999999999999999  9999999998654  233457889999999988776553       689999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||||........+......+++.       .+++|+.+...+.+    .+++.+.++||++||..+..+..    .....
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----~~~~~  151 (260)
T PRK06523         83 HVLGGSSAPAGGFAALTDEEWQD-------ELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP----ESTTA  151 (260)
T ss_pred             ECCcccccCCCCcccCCHHHHHH-------HHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC----CCcch
Confidence            99996432111111112222233       34788888766654    44556667899999987643311    01246


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hhhhc-cC--C------------ccccCCcccccCHHH
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RELLV-GK--D------------DELLQTETRTIARAD  285 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~~~~-~~--~------------~~~~~~~~~~i~v~D  285 (331)
                      |..+|..++.+.+       ..++++++++||++.++.... ..... ..  .            ...+  ...+..++|
T Consensus       152 Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~  229 (260)
T PRK06523        152 YAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP--LGRPAEPEE  229 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc--cCCCCCHHH
Confidence            9999999887655       358999999999998875321 00000 00  0            0011  112467899


Q ss_pred             HHHHHHHHhcCc--ccCCceEEeccCCCCCCCC
Q 046297          286 VAEVCIQALQFE--EAKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       286 va~~~~~~l~~~--~~~~~~~~i~~~~~~~~~t  316 (331)
                      +|++++.++.+.  ...|+.+.+.+   |...|
T Consensus       230 va~~~~~l~s~~~~~~~G~~~~vdg---g~~~~  259 (260)
T PRK06523        230 VAELIAFLASDRAASITGTEYVIDG---GTVPT  259 (260)
T ss_pred             HHHHHHHHhCcccccccCceEEecC---CccCC
Confidence            999999998764  25678898887   65544

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=4.8e-20  Score=162.14  Aligned_cols=212  Identities=17%  Similarity=0.102  Sum_probs=145.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh-------cCCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK-------IGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++||||||+|+||++++++|+++  |++|++..|+. +....       ...++.++.+|+++++.+.++++      
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999  99998877643 22211       12246688999999988877765      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                       ++|+|||++|......      ....+..   .....+++|+.+...+++++.+.  ..++||++||..++.+..+.  
T Consensus        83 ~~~d~vi~~ag~~~~~~------~~~~~~~---~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  151 (252)
T PRK06077         83 GVADILVNNAGLGLFSP------FLNVDDK---LIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGL--  151 (252)
T ss_pred             CCCCEEEECCCCCCCCC------hhhCCHH---HHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCc--
Confidence             6899999999632210      0011111   11233478888888888877643  23589999998775443332  


Q ss_pred             CCcchHHHHHHHHHHHHH----h--cCCCEEEEecCcccCCCcchhhhhccC-Cccc---cCCcccccCHHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA----D--SGIPYTIIRAGGLQDKEGGIRELLVGK-DDEL---LQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~----~--~~~~~~ilrp~~v~g~~~~~~~~~~~~-~~~~---~~~~~~~i~v~Dva~~~~~~  293 (331)
                         ..|+.+|...|.+.+    +  .++++.+++||++.++.........+. ....   ......+++++|+|++++.+
T Consensus       152 ---~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        152 ---SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHH
Confidence               469999999887765    2  378999999999987643211100010 0000   01123579999999999999


Q ss_pred             hcCcccCCceEEecc
Q 046297          294 LQFEEAKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~~~~~~~~i~~  308 (331)
                      +..+...|++|++.+
T Consensus       229 ~~~~~~~g~~~~i~~  243 (252)
T PRK06077        229 LKIESITGQVFVLDS  243 (252)
T ss_pred             hCccccCCCeEEecC
Confidence            987766788999997

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.5e-20  Score=163.65  Aligned_cols=213  Identities=17%  Similarity=0.123  Sum_probs=146.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+++|+||||+|+||+++++.|+++  |++|++++|++++.+.+       ..++.++.+|++|++.+.++++       
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999  99999999987654432       2347889999999998877664       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      ++|+|||++|...... .+.....++++       ...++|+.+...+++++.+.   ..++||++||.....+..+.  
T Consensus        82 ~~d~vi~~ag~~~~~~-~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~--  151 (258)
T PRK07890         82 RVDALVNNAFRVPSMK-PLADADFAHWR-------AVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKY--  151 (258)
T ss_pred             CccEEEECCccCCCCC-CcccCCHHHHH-------HHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCc--
Confidence            5899999998643321 11122222233       33488999999988888642   23589999998764432222  


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccC--C-cccc------CCcccccCHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGK--D-DELL------QTETRTIARAD  285 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~--~-~~~~------~~~~~~i~v~D  285 (331)
                         ..|..+|...+.+.+       ..++++++++||+++++....  .....+.  . ....      .....+.+++|
T Consensus       152 ---~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK07890        152 ---GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDE  228 (258)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHH
Confidence               458899999887665       248999999999999975321  0000000  0 0000      01123578999


Q ss_pred             HHHHHHHHhcCc--ccCCceEEecc
Q 046297          286 VAEVCIQALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~--~~~~~~~~i~~  308 (331)
                      ++++++.++...  ...|+++.+.+
T Consensus       229 va~a~~~l~~~~~~~~~G~~i~~~g  253 (258)
T PRK07890        229 VASAVLFLASDLARAITGQTLDVNC  253 (258)
T ss_pred             HHHHHHHHcCHhhhCccCcEEEeCC
Confidence            999999988753  24567776665

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.1e-20  Score=162.87  Aligned_cols=211  Identities=15%  Similarity=0.075  Sum_probs=144.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhh----c---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQK----I---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +..++|+||||+|+||+++++.|+++  |++|+++ .|+.++.+.    +   ...+.++++|++|++++.++++     
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999  9999875 576544322    2   2247789999999999887776     


Q ss_pred             --------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCC
Q 046297          147 --------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 --------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~  216 (331)
                              ++|+|||++|......  ..    ..+...   .....++|+.++.++++++.+.  +.++||++||..+..
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~--~~----~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~  152 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGT--IE----NTTEEI---FDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL  152 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCC--hh----hCCHHH---HHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC
Confidence                    4899999999643210  00    111111   1223378999999999888753  345899999987654


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCc-cc--c-CCcccccCHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDD-EL--L-QTETRTIARAD  285 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~-~~--~-~~~~~~i~v~D  285 (331)
                      +..+.     ..|+.+|...+.+.+       ..++++++++||++.++....  ...+... ..  . .....+++++|
T Consensus       153 ~~~~~-----~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d  225 (254)
T PRK12746        153 GFTGS-----IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK--LLDDPEIRNFATNSSVFGRIGQVED  225 (254)
T ss_pred             CCCCC-----cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh--hccChhHHHHHHhcCCcCCCCCHHH
Confidence            33222     458899999887654       357999999999998874311  0000000 00  0 01124578999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+++..++.++.  ..|++|++.+
T Consensus       226 va~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        226 IADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             HHHHHHHHcCcccCCcCCCEEEeCC
Confidence            9999998887653  3578999986

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.5e-20  Score=162.34  Aligned_cols=213  Identities=15%  Similarity=0.043  Sum_probs=148.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhc---CCCEEEEc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQ---GIDALIIL  154 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~  154 (331)
                      +..++++||||+|+||+++++.|+++  |++|++++|++++.+++..  +..++.+|++|.+.+.++++   ++|+|||+
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            34678999999999999999999999  9999999998876655422  36788999999988888876   48999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C-CCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G-AKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      +|......  .......++       ....++|+.+..++++++.+.    + .++||++||..++.+..+.     ..|
T Consensus        85 ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----~~y  150 (245)
T PRK07060         85 AGIASLES--ALDMTAEGF-------DRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDH-----LAY  150 (245)
T ss_pred             CCCCCCCC--hhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCC-----cHh
Confidence            99743211  001111112       223368899988888877542    2 3689999998765433222     459


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--
Q 046297          230 LVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--  298 (331)
Q Consensus       230 ~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--  298 (331)
                      ..+|..+|.+.+       ..+++++.+|||++.++....  .................+++++|+|++++.++..+.  
T Consensus       151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  230 (245)
T PRK07060        151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASM  230 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence            999999887665       247999999999999875321  000000000000112457899999999999998653  


Q ss_pred             cCCceEEecc
Q 046297          299 AKFKAFDLAS  308 (331)
Q Consensus       299 ~~~~~~~i~~  308 (331)
                      ..|+.+++.+
T Consensus       231 ~~G~~~~~~~  240 (245)
T PRK07060        231 VSGVSLPVDG  240 (245)
T ss_pred             ccCcEEeECC
Confidence            4578888876

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.84  E-value=1.1e-19  Score=160.80  Aligned_cols=212  Identities=17%  Similarity=0.114  Sum_probs=141.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh---hhc---CCCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK---QKI---GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~---~~l---~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++...   +++   ...+.++++|++|.+++.++++       
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            44688999999999999999999999  99999999975321   112   2246788999999888777665       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHH----HHHHHHHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQK----NQIDAAKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||...... .+...+..+++..       .++|+.+..    .+++.+++.+.++||++||..++..     
T Consensus        84 ~id~lv~nAg~~~~~~-~~~~~~~~~~~~~-------~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----  150 (260)
T PRK12823         84 RIDVLINNVGGTIWAK-PFEEYEEEQIEAE-------IRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-----  150 (260)
T ss_pred             CCeEEEECCccccCCC-ChhhCChHHHHHH-------HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-----
Confidence            5899999998532111 1111222222222       367777655    5555566667779999999865321     


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhc--cCC-cc--------c-cCCc-ccccC
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLV--GKD-DE--------L-LQTE-TRTIA  282 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~--~~~-~~--------~-~~~~-~~~i~  282 (331)
                        ....|+.+|...+.+.+       ..++++++++||+++++.........  +.. ..        . .... ..+.+
T Consensus       151 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (260)
T PRK12823        151 --NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGT  228 (260)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCC
Confidence              11359999999887765       24899999999999997421110000  000 00        0 0001 12457


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++|+|++++.++.++.  ..|+++++.+
T Consensus       229 ~~dva~~~~~l~s~~~~~~~g~~~~v~g  256 (260)
T PRK12823        229 IDEQVAAILFLASDEASYITGTVLPVGG  256 (260)
T ss_pred             HHHHHHHHHHHcCcccccccCcEEeecC
Confidence            8999999999887643  4678999986

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.84  E-value=9.4e-20  Score=159.86  Aligned_cols=211  Identities=18%  Similarity=0.106  Sum_probs=145.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC----chhhh----c---CCCCcEEEccCCCcccHHHHhc--
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE----ESKQK----I---GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~----~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      .++++++||||+|+||+++++.|+++  |++|+++.|..    +....    +   ..++.++.+|+.|++.+.++++  
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            34678999999999999999999999  99999977642    22221    1   2347889999999998887774  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH-----HcCCCeEEEEccCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK-----AAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~-----~~~vk~~v~~SS~~~~~  216 (331)
                           ++|+|||++|.....  .+......+++.       ..++|+.++.++++++.     +.+.++||++||..++.
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~  152 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDA--AFAELSIEEWDD-------VIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR  152 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCC--CcccCCHHHHHH-------HHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC
Confidence                 589999999975421  111111222222       34889999999998887     45678999999987654


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      ...+.     ..|..+|...+.+.+       ..+++++++|||++.++...............+  ...+.+++|++++
T Consensus       153 ~~~~~-----~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~  225 (249)
T PRK12827        153 GNRGQ-----VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVP--VQRLGEPDEVAAL  225 (249)
T ss_pred             CCCCC-----chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCC--CcCCcCHHHHHHH
Confidence            43322     458899988776554       248999999999999875321100000000001  1224588999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.+..  ..|+.+++.+
T Consensus       226 ~~~l~~~~~~~~~g~~~~~~~  246 (249)
T PRK12827        226 VAFLVSDAASYVTGQVIPVDG  246 (249)
T ss_pred             HHHHcCcccCCccCcEEEeCC
Confidence            999886643  3478888876

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.84  E-value=5.7e-20  Score=161.31  Aligned_cols=211  Identities=12%  Similarity=0.062  Sum_probs=145.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-Cchhhhc-------CCCCcEEEccCCCcccHHHHhcC----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQKI-------GGADDLFIGDIRDSNSIIPAIQG----  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~~----  147 (331)
                      +.+++++||||+|+||++++++|+++  |++|+++.++ ++..+++       ..++.++.+|++|++.+.++++.    
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999  9999876553 3332221       12478899999999988887763    


Q ss_pred             ---CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCC
Q 046297          148 ---IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       148 ---~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~  220 (331)
                         +|+||||+|.....  .+....+..+       ...+++|+.++..+++++..    .+.++||++||..+.....+
T Consensus        82 ~~~id~vi~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  152 (247)
T PRK12935         82 FGKVDILVNNAGITRDR--TFKKLNREDW-------ERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG  152 (247)
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC
Confidence               79999999974321  1111112222       33348899998888888753    34569999999866433222


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                      .     ..|..+|...+.+.+       ..++++++++||++.++....  .........  ......+.+++|++++++
T Consensus       153 ~-----~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~edva~~~~  225 (247)
T PRK12935        153 Q-----TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVA--KIPKKRFGQADEIAKGVV  225 (247)
T ss_pred             C-----cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHH--hCCCCCCcCHHHHHHHHH
Confidence            2     459999998776654       258999999999998753211  000000000  011245789999999999


Q ss_pred             HHhcCcc-cCCceEEecc
Q 046297          292 QALQFEE-AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~-~~~~~~~i~~  308 (331)
                      .+++... ..|+.|++.+
T Consensus       226 ~~~~~~~~~~g~~~~i~~  243 (247)
T PRK12935        226 YLCRDGAYITGQQLNING  243 (247)
T ss_pred             HHcCcccCccCCEEEeCC
Confidence            9887543 5678999997

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.3e-20  Score=165.06  Aligned_cols=208  Identities=17%  Similarity=0.121  Sum_probs=143.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi~~  154 (331)
                      +++|+||||+|+||++++++|+++  |++|++++|++++.... .+++++++|++|++++.++++       ++|+||||
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPARAAPI-PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhhcccc-CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            468999999999999999999999  99999999987655433 358899999999999988886       47999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      +|.....  .......++++       ...++|+.++..++++    +++.+.++||++||..+......     ...|+
T Consensus        81 ag~~~~~--~~~~~~~~~~~-------~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----~~~Y~  146 (270)
T PRK06179         81 AGVGLAG--AAEESSIAQAQ-------ALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY-----MALYA  146 (270)
T ss_pred             CCCCCCc--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC-----ccHHH
Confidence            9974331  11111122222       3347888887777766    56678889999999876443221     14699


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC-----------ccccCCcccccCHHHHHHHHHH
Q 046297          231 VWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD-----------DELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       231 ~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-----------~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      .+|...+.+.+       +.++++++++||++.++............           .............+|+|+.++.
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  226 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVK  226 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence            99999887654       36999999999999876432100000000           0000011224678999999999


Q ss_pred             HhcCcccCCceEEec
Q 046297          293 ALQFEEAKFKAFDLA  307 (331)
Q Consensus       293 ~l~~~~~~~~~~~i~  307 (331)
                      ++..+.. +..|...
T Consensus       227 ~~~~~~~-~~~~~~~  240 (270)
T PRK06179        227 AALGPWP-KMRYTAG  240 (270)
T ss_pred             HHcCCCC-CeeEecC
Confidence            9886642 3455443

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.7e-20  Score=161.70  Aligned_cols=210  Identities=16%  Similarity=0.109  Sum_probs=145.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      .+++++||||+|+||++++++|+++  |++|+++.|+.+.....      ..++.++++|++|++++.++++       +
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999999999999  99999999987654332      2347889999999999888775       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|+|||++|......  +......+++       ...++|+.++.++.+    ++++.+.++||++||..+......   
T Consensus        82 id~vi~~ag~~~~~~--~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---  149 (252)
T PRK06138         82 LDVLVNNAGFGCGGT--VVTTDEADWD-------AVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG---  149 (252)
T ss_pred             CCEEEECCCCCCCCC--cccCCHHHHH-------HHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC---
Confidence            899999999643210  0011111122       233788888755544    456677889999999865433222   


Q ss_pred             CCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchhhhhccC--Cccc---c--CCc-ccccCHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIRELLVGK--DDEL---L--QTE-TRTIARADVAE  288 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~~~~~~~--~~~~---~--~~~-~~~i~v~Dva~  288 (331)
                        ...|..+|...+.+.+.       .+++++++|||+++++....  .+...  ....   .  ... ..+++++|+++
T Consensus       150 --~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  225 (252)
T PRK06138        150 --RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR--IFARHADPEALREALRARHPMNRFGTAEEVAQ  225 (252)
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh--hhccccChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence              24599999998876652       48999999999998875321  11100  0000   0  011 23689999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.++.  ..|+.+.+.+
T Consensus       226 ~~~~l~~~~~~~~~g~~~~~~~  247 (252)
T PRK06138        226 AALFLASDESSFATGTTLVVDG  247 (252)
T ss_pred             HHHHHcCchhcCccCCEEEECC
Confidence            9999998764  3467777765

>PRK05717 oxidoreductase; Validated

Probab=99.84  E-value=1.4e-19  Score=159.70  Aligned_cols=213  Identities=15%  Similarity=0.100  Sum_probs=146.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..+++|+||||+|+||+++++.|+++  |++|++++|++++...    +...+.++++|++|++++.++++       ++
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            34688999999999999999999999  9999999988654433    23457889999999988766553       47


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      |+||||+|........+......+++..+       ++|+.++.++++++..   ...++||++||..+......     
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~-----  153 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVL-------AVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD-----  153 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHH-------HHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC-----
Confidence            99999999753321111122222333333       8999999999999863   22368999999876433221     


Q ss_pred             cchHHHHHHHHHHHHH----h--cCCCEEEEecCcccCCCcchh--hhhcc-CCccccCCcccccCHHHHHHHHHHHhcC
Q 046297          226 NGNILVWKRKAEQYLA----D--SGIPYTIIRAGGLQDKEGGIR--ELLVG-KDDELLQTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~----~--~~~~~~ilrp~~v~g~~~~~~--~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                      ...|+.+|...+.+.+    +  .++++++++||++.++.....  ..... .....+.  ....+++|+|.+++.++..
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~va~~~~~l~~~  231 (255)
T PRK05717        154 TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPA--GRVGTVEDVAAMVAWLLSR  231 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCC--CCCcCHHHHHHHHHHHcCc
Confidence            1459999999887765    2  358999999999988753211  00000 0001111  2357899999999988865


Q ss_pred             cc--cCCceEEecc
Q 046297          297 EE--AKFKAFDLAS  308 (331)
Q Consensus       297 ~~--~~~~~~~i~~  308 (331)
                      ..  ..|+.+.+.+
T Consensus       232 ~~~~~~g~~~~~~g  245 (255)
T PRK05717        232 QAGFVTGQEFVVDG  245 (255)
T ss_pred             hhcCccCcEEEECC
Confidence            42  3577787765

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.84  E-value=1.1e-19  Score=159.11  Aligned_cols=210  Identities=17%  Similarity=0.142  Sum_probs=142.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hh----hc---CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQ----KI---GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~----~l---~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++|+||||+|+||+++++.|+++  |++|+++.|+..+ ..    .+   ...+.++.+|+.|++.+.++++      
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999  9999998887643 11    11   2347788999999998887765      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+|||++|......  ........+       ....+.|+.+..++++++..    .+.++||++||......... 
T Consensus        82 ~~id~vi~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~-  151 (248)
T PRK05557         82 GGVDILVNNAGITRDNL--LMRMKEEDW-------DRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG-  151 (248)
T ss_pred             CCCCEEEECCCcCCCCC--cccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC-
Confidence             5899999999643210  000111111       22336788888888877754    45678999999754333222 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                          ...|..+|...+.+++       ..++++++++||.+.++....  ...........  ....+.+++|+++++..
T Consensus       152 ----~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~va~~~~~  225 (248)
T PRK05557        152 ----QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQI--PLGRLGQPEEIASAVAF  225 (248)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcC--CCCCCcCHHHHHHHHHH
Confidence                2458899988876554       358999999999986553211  01110000001  11235799999999988


Q ss_pred             HhcCc--ccCCceEEecc
Q 046297          293 ALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~--~~~~~~~~i~~  308 (331)
                      ++...  ...|+.|++.+
T Consensus       226 l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        226 LASDEAAYITGQTLHVNG  243 (248)
T ss_pred             HcCcccCCccccEEEecC
Confidence            88662  34678999986

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.3e-20  Score=160.74  Aligned_cols=211  Identities=18%  Similarity=0.091  Sum_probs=146.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++|+||||+|+||+++++.|+++  |++|++++|++++...+       ..++.++++|+.|++++.++++      
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            44688999999999999999999999  99999999987654332       2347889999999998887774      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+|||++|......  .......++       ....+.|+.+..++++++..    .+.++||++||..+..+....
T Consensus        83 ~~id~vi~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  153 (250)
T PRK12939         83 GGLDGLVNNAGITNSKS--ATELDIDTW-------DAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKL  153 (250)
T ss_pred             CCCCEEEECCCCCCCCC--hhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCc
Confidence             6899999999643210  111111112       22236788888888777653    344599999997654332221


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---hhhccCCccccCCcccccCHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---ELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                           ..|..+|...+.+.+       ..+++++.++||.+.++.....   ........  ......+++++|+|++++
T Consensus       154 -----~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~  226 (250)
T PRK12939        154 -----GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLK--GRALERLQVPDDVAGAVL  226 (250)
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHh--cCCCCCCCCHHHHHHHHH
Confidence                 358999999887765       3579999999999877653210   00000000  011234689999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++..+.  ..|+.+.+.+
T Consensus       227 ~l~~~~~~~~~G~~i~~~g  245 (250)
T PRK12939        227 FLLSDAARFVTGQLLPVNG  245 (250)
T ss_pred             HHhCccccCccCcEEEECC
Confidence            9997653  4678888886

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-19  Score=159.61  Aligned_cols=217  Identities=14%  Similarity=0.028  Sum_probs=146.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh----c---CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK----I---GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .++++|||||+|+||++++++|+++  |++|+++.|.. +..+.    +   ...+.++.+|++|.+.+.++++      
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999  99999887753 32221    1   2347789999999998887775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----CCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||.....  .+......+++..       .++|+.++..+++++...    +-+++|+++|.....+... 
T Consensus        86 ~~iD~vi~~ag~~~~~--~~~~~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~-  155 (258)
T PRK09134         86 GPITLLVNNASLFEYD--SAASFTRASWDRH-------MATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD-  155 (258)
T ss_pred             CCCCEEEECCcCCCCC--ccccCCHHHHHHH-------HHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC-
Confidence             479999999964321  1111122223333       388999999888877643    3457888887654322211 


Q ss_pred             CCCCcchHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          222 NSLGNGNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                          ...|+.+|..+|.+.+.      .++++++++||++..................+.  ....+++|+|++++.+++
T Consensus       156 ----~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~d~a~~~~~~~~  229 (258)
T PRK09134        156 ----FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPL--GRGSTPEEIAAAVRYLLD  229 (258)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhc
Confidence                14699999988876652      248999999999876542211111110001111  124789999999999999


Q ss_pred             CcccCCceEEeccCCCCCCCCHH
Q 046297          296 FEEAKFKAFDLASKPEGTGTPTK  318 (331)
Q Consensus       296 ~~~~~~~~~~i~~~~~~~~~t~~  318 (331)
                      .+...|+.|++.+   +..++++
T Consensus       230 ~~~~~g~~~~i~g---g~~~~~~  249 (258)
T PRK09134        230 APSVTGQMIAVDG---GQHLAWL  249 (258)
T ss_pred             CCCcCCCEEEECC---Ceecccc
Confidence            7767788999987   6555443

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=3.5e-19  Score=151.79  Aligned_cols=226  Identities=20%  Similarity=0.244  Sum_probs=170.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh----hc-------CCCCcEEEccCCCcccHHHHhc--CC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ----KI-------GGADDLFIGDIRDSNSIIPAIQ--GI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~----~l-------~~~~~~v~~Dl~d~~~~~~~l~--~~  148 (331)
                      +|+.||||-||+-|++|++.|+++  ||+|.++.|......    ++       ..++.++.+|++|...+.++++  ..
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P   79 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP   79 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence            477999999999999999999999  999999999743211    11       1237899999999999999997  57


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC--CeEEEEccCC--C------CCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA--KQIVLVGSMG--G------TNLN  218 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--k~~v~~SS~~--~------~~~~  218 (331)
                      |-|+|+|+....      +.+++.|+...       +++..|+.+++++.+..|.  -||...||+-  +      .+++
T Consensus        80 dEIYNLaAQS~V------~vSFe~P~~T~-------~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~  146 (345)
T COG1089          80 DEIYNLAAQSHV------GVSFEQPEYTA-------DVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKET  146 (345)
T ss_pred             hhheeccccccc------cccccCcceee-------eechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccC
Confidence            999999998544      55566666555       9999999999999998764  3788888862  2      2333


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc-----------hhhhhccCCcccc----CCccc
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG-----------IRELLVGKDDELL----QTETR  279 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~-----------~~~~~~~~~~~~~----~~~~~  279 (331)
                      .|+  ++.++|+.+|..+..+..    .+|+-.+.=..++--+|..+           ..++..|....+.    +.+++
T Consensus       147 TPF--yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRD  224 (345)
T COG1089         147 TPF--YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRD  224 (345)
T ss_pred             CCC--CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccccc
Confidence            343  344789999998876654    46665554333333334322           2344445555543    56799


Q ss_pred             ccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          280 TIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      |-|..|.++++..+|+.+.  .+.|.++.   |+..|+.|++++..+.+|
T Consensus       225 WG~A~DYVe~mwlmLQq~~--PddyViAT---g~t~sVrefv~~Af~~~g  269 (345)
T COG1089         225 WGHAKDYVEAMWLMLQQEE--PDDYVIAT---GETHSVREFVELAFEMVG  269 (345)
T ss_pred             ccchHHHHHHHHHHHccCC--CCceEEec---CceeeHHHHHHHHHHHcC
Confidence            9999999999999998875  56899999   999999999999888776

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1e-19  Score=162.23  Aligned_cols=194  Identities=14%  Similarity=0.081  Sum_probs=138.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      +.+++|+||||+|+||++++++|+++  |++|++++|++++.+++.   ..+.++.+|++|++++.++++       ++|
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAAL--GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPID   80 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            34678999999999999999999999  999999999887655432   247889999999998776664       579


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      ++|||+|.....  .+......       +...+.++|+.++..++++    +++.+.++||++||..+..+....    
T Consensus        81 ~li~~ag~~~~~--~~~~~~~~-------~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  147 (273)
T PRK07825         81 VLVNNAGVMPVG--PFLDEPDA-------VTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGM----  147 (273)
T ss_pred             EEEECCCcCCCC--ccccCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCC----
Confidence            999999975321  11111111       1123347888876665554    456677899999998765433222    


Q ss_pred             cchHHHHHHHHHHHH-------HhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          226 NGNILVWKRKAEQYL-------ADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~-------~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                       ..|..+|...+.+.       ++.|+++++++||++.++...      +..   ......+++++|+|+.++.++.++.
T Consensus       148 -~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~------~~~---~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        148 -ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA------GTG---GAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             -cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc------ccc---cccCCCCCCHHHHHHHHHHHHhCCC
Confidence             45889998766543       346899999999998665321      110   0123356899999999999998764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.84  E-value=1.4e-19  Score=159.07  Aligned_cols=210  Identities=17%  Similarity=0.134  Sum_probs=145.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .++++|||||+|+||++++++|+++  |++|++++|+.++..++       ..++.++.+|+.|.+.+.++++       
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999  99999999987654332       2357889999999998888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+|||++|.....  .+.......++       ...++|+.+..++++++.    +.+.++||++||..++.+...  
T Consensus        80 ~~d~vi~~ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~--  148 (250)
T TIGR03206        80 PVDVLVNNAGWDKFG--PFTKTEPPLWE-------RLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG--  148 (250)
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC--
Confidence            589999999863221  01111111112       234789999888766654    567789999999876543322  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh--------hhccCCccccCCcccccCHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE--------LLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                         ...|..+|...+.+.+       ..++++++++||+++++......        .........+.  .....++|+|
T Consensus       149 ---~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva  223 (250)
T TIGR03206       149 ---EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL--GRLGQPDDLP  223 (250)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc--cCCcCHHHHH
Confidence               2459999988776554       24899999999999887422100        00000001111  1246789999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++..++..+.  ..|+++++.+
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       224 GAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             HHHHHHcCcccCCCcCcEEEeCC
Confidence            99999887653  3578999876

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06128 oxidoreductase; Provisional

Probab=99.84  E-value=1.2e-19  Score=164.14  Aligned_cols=212  Identities=16%  Similarity=0.144  Sum_probs=148.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhh----c---CCCCcEEEccCCCcccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQK----I---GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~----l---~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ..+++||||||+|+||+++++.|+++  |++|++..|+.+.  .++    +   ...+.++.+|++|++++.++++    
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999  9999988775432  111    1   2346788999999988877764    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~  221 (331)
                         ++|+||||||...... .+...+.++++..+       ++|+.++..+++++...  .-.+||++||..++......
T Consensus       131 ~~g~iD~lV~nAg~~~~~~-~~~~~~~~~~~~~~-------~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  202 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVK-DIADITTEQFDATF-------KTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL  202 (300)
T ss_pred             HhCCCCEEEECCcccCCCC-ChhhCCHHHHHHHH-------HHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc
Confidence               6899999999643211 11122223333444       89999999999998753  22589999998775433222


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                           ..|+.+|...+.+.+       ..|+++++|+||++.++....    ...........+  ...+.+.+|+|.++
T Consensus       203 -----~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~dva~~~  275 (300)
T PRK06128        203 -----LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP--MKRPGQPVEMAPLY  275 (300)
T ss_pred             -----hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC--CCCCcCHHHHHHHH
Confidence                 459999999887765       358999999999999875311    111100000111  12356899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++....  ..|++|++.+
T Consensus       276 ~~l~s~~~~~~~G~~~~v~g  295 (300)
T PRK06128        276 VLLASQESSYVTGEVFGVTG  295 (300)
T ss_pred             HHHhCccccCccCcEEeeCC
Confidence            99887643  3578999987

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=6.1e-20  Score=151.32  Aligned_cols=219  Identities=16%  Similarity=0.137  Sum_probs=157.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~  157 (331)
                      +++|||||++|.+|++|++.+.++  |.  +-.++.-+.             .+|+++..+.+++++  +...|||+|+.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q--~~~~e~wvf~~sk-------------d~DLt~~a~t~~lF~~ekPthVIhlAAm   65 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQ--GFDDENWVFIGSK-------------DADLTNLADTRALFESEKPTHVIHLAAM   65 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhc--CCCCcceEEeccc-------------cccccchHHHHHHHhccCCceeeehHhh
Confidence            478999999999999999999998  44  333333222             369999999999997  68999999998


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCC-----------CCCCc
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL-----------NSLGN  226 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~-----------~~~~~  226 (331)
                      .++....     +..       +.+....|+....|++..|-++|++++++..|...+....+.           ++-..
T Consensus        66 VGGlf~N-----~~y-------nldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN  133 (315)
T KOG1431|consen   66 VGGLFHN-----NTY-------NLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSN  133 (315)
T ss_pred             hcchhhc-----CCC-------chHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            8775431     112       233347788888999999999999999998887653221111           11111


Q ss_pred             chHHHHHHHHH----HHHHhcCCCEEEEecCcccCCCcch---------------hhhhc-cC-CccccCCc---ccccC
Q 046297          227 GNILVWKRKAE----QYLADSGIPYTIIRAGGLQDKEGGI---------------RELLV-GK-DDELLQTE---TRTIA  282 (331)
Q Consensus       227 ~~y~~sK~~~e----~~~~~~~~~~~ilrp~~v~g~~~~~---------------~~~~~-~~-~~~~~~~~---~~~i~  282 (331)
                      -.|..+|+++.    .|..++|..++.+-|.++|||.+++               ..... |. ...+++.+   ++|+|
T Consensus       134 ~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiy  213 (315)
T KOG1431|consen  134 FGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIY  213 (315)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhh
Confidence            45888887754    5666899999999999999997651               11111 22 22233433   78899


Q ss_pred             HHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          283 RADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      .+|+|++++++|.+=+. -+..+++.++ ...+|++|+++++.++.+
T Consensus       214 s~DLA~l~i~vlr~Y~~-vEpiils~ge-~~EVtI~e~aeaV~ea~~  258 (315)
T KOG1431|consen  214 SDDLADLFIWVLREYEG-VEPIILSVGE-SDEVTIREAAEAVVEAVD  258 (315)
T ss_pred             HhHHHHHHHHHHHhhcC-ccceEeccCc-cceeEHHHHHHHHHHHhC
Confidence            99999999999976432 2567788722 238999999999999875

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=1.7e-19  Score=157.62  Aligned_cols=194  Identities=20%  Similarity=0.159  Sum_probs=139.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+++++||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++.+|++|++++.++++       
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELG   83 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999  99999999987654332       2347789999999999888876       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+|||++|.....  .+.....++++       ...++|+.++.++++++.    +.+.+++|++||..+.....+. 
T Consensus        84 ~id~vi~~ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~-  153 (239)
T PRK07666         84 SIDILINNAGISKFG--KFLELDPAEWE-------KIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVT-  153 (239)
T ss_pred             CccEEEEcCccccCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCC-
Confidence            689999999864321  11111112222       233888888877777664    4567889999998764443222 


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                          ..|+.+|...+.+++       +.+++++++|||++.++.........       .....++..+|+|+.++.++.
T Consensus       154 ----~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~a~~~~~~l~  222 (239)
T PRK07666        154 ----SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD-------GNPDKVMQPEDLAEFIVAQLK  222 (239)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccc-------cCCCCCCCHHHHHHHHHHHHh
Confidence                348899988776654       36899999999999887532111110       112345889999999999998


Q ss_pred             Cc
Q 046297          296 FE  297 (331)
Q Consensus       296 ~~  297 (331)
                      ++
T Consensus       223 ~~  224 (239)
T PRK07666        223 LN  224 (239)
T ss_pred             CC
Confidence            76

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.4e-19  Score=159.89  Aligned_cols=191  Identities=16%  Similarity=0.156  Sum_probs=137.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC------CCcEEEccCCCcccHHHHhc-------CC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG------ADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~------~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +++|+||||+|+||++++++|+++  |++|++++|++++.+++..      ++.++.+|++|++++.++++       .+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999  9999999998766544321      47889999999999887765       37


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||+|....... ..+....+++       ...++|+.++..+++    .+++.+.++||++||..+..+...    
T Consensus        80 d~lv~~ag~~~~~~~-~~~~~~~~~~-------~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~----  147 (257)
T PRK07024         80 DVVIANAGISVGTLT-EEREDLAVFR-------EVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG----  147 (257)
T ss_pred             CEEEECCCcCCCccc-cccCCHHHHH-------HHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC----
Confidence            999999996432110 0011222233       334889888777655    566677789999999876433221    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                       ...|+.+|...+.+.+       ..++++++++||++.++....      ..  .  ....+++.+|+++.++.++.++
T Consensus       148 -~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~------~~--~--~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        148 -AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH------NP--Y--PMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             -CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc------CC--C--CCCCccCHHHHHHHHHHHHhCC
Confidence             1459999999887663       468999999999998874211      00  0  0011368999999999999764

>PRK06194 hypothetical protein; Provisional

Probab=99.83  E-value=2.9e-19  Score=160.39  Aligned_cols=198  Identities=14%  Similarity=0.052  Sum_probs=134.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+.+..++.       ..++.++.+|++|.+++.++++      
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            44678999999999999999999999  99999999986554332       1246779999999999988876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCC------CeEEEEccCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGA------KQIVLVGSMGGT  215 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~v------k~~v~~SS~~~~  215 (331)
                       ++|+||||||.....  .+......+++.       .+++|+.++.+++++    +++.+.      +++|++||..++
T Consensus        82 g~id~vi~~Ag~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  152 (287)
T PRK06194         82 GAVHLLFNNAGVGAGG--LVWENSLADWEW-------VLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL  152 (287)
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHHHH-------HHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence             479999999975431  111112222222       348899988776666    555443      589999998765


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHHh---------cCCCEEEEecCcccCCCcchhhhhccCCccccCC----------
Q 046297          216 NLNHPLNSLGNGNILVWKRKAEQYLAD---------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQT----------  276 (331)
Q Consensus       216 ~~~~~~~~~~~~~y~~sK~~~e~~~~~---------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~----------  276 (331)
                      ....+.     ..|+.+|...+.+.+.         .++++..+.||.+..+....   ..+++..+.+.          
T Consensus       153 ~~~~~~-----~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~---~~~~~~~~~~~~~~~~~~~~~  224 (287)
T PRK06194        153 LAPPAM-----GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS---ERNRPADLANTAPPTRSQLIA  224 (287)
T ss_pred             cCCCCC-----cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc---cccCchhcccCccccchhhHH
Confidence            433221     4599999998877652         34778899999886553211   11111111100          


Q ss_pred             --------cccccCHHHHHHHHHHHhcC
Q 046297          277 --------ETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       277 --------~~~~i~v~Dva~~~~~~l~~  296 (331)
                              ....++++|+|+.++.++..
T Consensus       225 ~~~~~~~~~~~~~s~~dva~~i~~~~~~  252 (287)
T PRK06194        225 QAMSQKAVGSGKVTAEEVAQLVFDAIRA  252 (287)
T ss_pred             HHHHHhhhhccCCCHHHHHHHHHHHHHc
Confidence                    01137899999999998753

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.83  E-value=2.3e-19  Score=158.67  Aligned_cols=211  Identities=16%  Similarity=0.130  Sum_probs=142.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-----CCCcEEEccCCCcccHHHHhc------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-----GADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-----~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +++||||||+|+||++++++|+++  |++|++++|+.++.+.+    .     ..+.++.+|++|++++.++++      
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999  99999999987544332    1     247889999999988877664      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~~~~  220 (331)
                       ++|+|||++|.....  .+......++       ....++|+.++..+++++.    +.+ -.+||++||..+..... 
T Consensus        80 ~~id~vv~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~-  149 (259)
T PRK12384         80 GRVDLLVYNAGIAKAA--FITDFQLGDF-------DRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK-  149 (259)
T ss_pred             CCCCEEEECCCcCCCC--CcccCCHHHH-------HHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-
Confidence             579999999864331  1111112222       2334788888776666553    445 35899999875432221 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhc--cC-Cccc---c---CCccccc
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLV--GK-DDEL---L---QTETRTI  281 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~--~~-~~~~---~---~~~~~~i  281 (331)
                          ....|+.+|...+.+.+       ..|++++++|||.++++....   .....  +. ....   .   .....++
T Consensus       150 ----~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (259)
T PRK12384        150 ----HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGC  225 (259)
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCC
Confidence                12459999998766544       478999999999987764321   00000  00 0000   0   0124578


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++|++++++.++.+..  ..|++|++.+
T Consensus       226 ~~~dv~~~~~~l~~~~~~~~~G~~~~v~~  254 (259)
T PRK12384        226 DYQDVLNMLLFYASPKASYCTGQSINVTG  254 (259)
T ss_pred             CHHHHHHHHHHHcCcccccccCceEEEcC
Confidence            99999999998887543  3578999987

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.9e-19  Score=159.07  Aligned_cols=211  Identities=11%  Similarity=0.070  Sum_probs=146.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh---h---cCCCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ---K---IGGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~---~---l~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++++.+   +   ...++.++.+|++|++++.++++       
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            45678999999999999999999999  999999999876541   1   12357889999999998888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      ++|+||||+|......  ++... +++       ....++|+.+...+.+++..   .+.++||++||..+..+..+.  
T Consensus        83 ~id~vi~~ag~~~~~~--~~~~~-~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~--  150 (258)
T PRK08628         83 RIDGLVNNAGVNDGVG--LEAGR-EAF-------VASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGT--  150 (258)
T ss_pred             CCCEEEECCcccCCCc--ccCCH-HHH-------HHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCC--
Confidence            5899999999633211  11111 122       23347888888888777643   234689999998765433222  


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hhhhccCC-------ccccCCcccccCHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RELLVGKD-------DELLQTETRTIARADVAE  288 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~~~~~~~-------~~~~~~~~~~i~v~Dva~  288 (331)
                         ..|..+|..++.+.+       ..+++++.|+||+++++.... ........       ...+ ....+++++|+|+
T Consensus       151 ---~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~  226 (258)
T PRK08628        151 ---SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIP-LGHRMTTAEEIAD  226 (258)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCC-ccccCCCHHHHHH
Confidence               459999999887765       358999999999999874211 00000000       0011 1124688999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++....  ..|+.+.+.+
T Consensus       227 ~~~~l~~~~~~~~~g~~~~~~g  248 (258)
T PRK08628        227 TAVFLLSERSSHTTGQWLFVDG  248 (258)
T ss_pred             HHHHHhChhhccccCceEEecC
Confidence            9999997653  4577777765

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.5e-19  Score=155.01  Aligned_cols=204  Identities=17%  Similarity=0.167  Sum_probs=139.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc---CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ---GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~a  155 (331)
                      +|+||||||+|+||+++++.|+++   ++|++++|+.++.+.+.   ..++++++|+.|++.+.++++   ++|+|||++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   79 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT---HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNA   79 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECC
Confidence            578999999999999999999986   88999999876644332   357899999999999998887   599999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHH
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILV  231 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~  231 (331)
                      |......  .......++       ....++|+.+    ++++++++++. .+++|++||..+.....+.     ..|..
T Consensus        80 g~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~-----~~y~~  144 (227)
T PRK08219         80 GVADLGP--VAESTVDEW-------RATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGW-----GSYAA  144 (227)
T ss_pred             CcCCCCC--cccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCC-----chHHH
Confidence            9743210  000000111       1223667777    45555555554 4689999998765433222     45889


Q ss_pred             HHHHHHHHHHh-----cC-CCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEE
Q 046297          232 WKRKAEQYLAD-----SG-IPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFD  305 (331)
Q Consensus       232 sK~~~e~~~~~-----~~-~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  305 (331)
                      +|...+.+++.     .+ ++++.++||.+.++....  .........  ....+++++|+|++++.+++.+. .+.+++
T Consensus       145 ~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~--~~~~~~~~~--~~~~~~~~~dva~~~~~~l~~~~-~~~~~~  219 (227)
T PRK08219        145 SKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG--LVAQEGGEY--DPERYLRPETVAKAVRFAVDAPP-DAHITE  219 (227)
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh--hhhhhcccc--CCCCCCCHHHHHHHHHHHHcCCC-CCccce
Confidence            99888866542     24 899999999887653221  111111111  12457999999999999998764 456777


Q ss_pred             ecc
Q 046297          306 LAS  308 (331)
Q Consensus       306 i~~  308 (331)
                      +.-
T Consensus       220 ~~~  222 (227)
T PRK08219        220 VVV  222 (227)
T ss_pred             EEE
Confidence            764

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.2e-19  Score=157.08  Aligned_cols=196  Identities=16%  Similarity=0.182  Sum_probs=138.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ++++++||||+|+||++++++|+++  |++|++++|++++...+       ..++.++.+|++|++.+.++++       
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999  99999999987654432       2357789999999998877765       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+|||++|.....  .+......++       ....++|+.+..++++.+    ++.+.++||++||..++.+..+  
T Consensus        83 ~id~lv~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--  151 (241)
T PRK07454         83 CPDVLINNAGMAYTG--PLLEMPLSDW-------QWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ--  151 (241)
T ss_pred             CCCEEEECCCccCCC--chhhCCHHHH-------HHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC--
Confidence            489999999964321  0111111122       223377888876666554    5556679999999876543222  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                         ...|..+|...+.+.+       ..+++++++|||++.++.......    ....  ....++.++|+|++++.++.
T Consensus       152 ---~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~----~~~~--~~~~~~~~~~va~~~~~l~~  222 (241)
T PRK07454        152 ---WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETV----QADF--DRSAMLSPEQVAQTILHLAQ  222 (241)
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccccc----cccc--ccccCCCHHHHHHHHHHHHc
Confidence               2459999999886654       358999999999997764211000    0000  11245899999999999998


Q ss_pred             Ccc
Q 046297          296 FEE  298 (331)
Q Consensus       296 ~~~  298 (331)
                      ++.
T Consensus       223 ~~~  225 (241)
T PRK07454        223 LPP  225 (241)
T ss_pred             CCc
Confidence            774

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.82  E-value=4.6e-19  Score=155.96  Aligned_cols=211  Identities=15%  Similarity=0.089  Sum_probs=146.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|+.  .......+.++++|+.|++.+.++++       ++|+||
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAF--LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV   81 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecch--hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            44688999999999999999999999  99999999986  22234458889999999999988875       379999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||+|.....  .....+..+++.       ..++|+.+...+++++.    +.+.++||++||..+..+..+.     ..
T Consensus        82 ~~ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~-----~~  147 (252)
T PRK08220         82 NAAGILRMG--ATDSLSDEDWQQ-------TFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGM-----AA  147 (252)
T ss_pred             ECCCcCCCC--CcccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCC-----ch
Confidence            999974321  111112222333       33788888888887764    3455689999998654332222     45


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhh-ccCC-------ccc-c-CCcccccCHHHHHHHHH
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELL-VGKD-------DEL-L-QTETRTIARADVAEVCI  291 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~-~~~~-------~~~-~-~~~~~~i~v~Dva~~~~  291 (331)
                      |+.+|...+.+.+       .+++++++++||++.++........ ....       ... . .....+++++|+|++++
T Consensus       148 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  227 (252)
T PRK08220        148 YGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVL  227 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHH
Confidence            8999999887664       3689999999999988753210000 0000       000 0 11235689999999999


Q ss_pred             HHhcCc--ccCCceEEecc
Q 046297          292 QALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~--~~~~~~~~i~~  308 (331)
                      .++.+.  ...|+++.+.+
T Consensus       228 ~l~~~~~~~~~g~~i~~~g  246 (252)
T PRK08220        228 FLASDLASHITLQDIVVDG  246 (252)
T ss_pred             HHhcchhcCccCcEEEECC
Confidence            988754  24566777765

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.82  E-value=2.8e-19  Score=157.06  Aligned_cols=211  Identities=17%  Similarity=0.104  Sum_probs=144.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--h---hhcCCCCcEEEccCCCcccHHHHhc-------C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--K---QKIGGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~---~~l~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|+...  .   ..+...+.++++|++|++++.++++       +
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34688999999999999999999999  9999999997521  1   1223457899999999998886664       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CCeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk~~v~~SS~~~~~~~~~~~  222 (331)
                      +|+||||+|.....  .+......+++       ...++|+.+...+++++..    .+ .+++|++||..++.+.... 
T Consensus        81 ~d~li~~ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-  150 (248)
T TIGR01832        81 IDILVNNAGIIRRA--DAEEFSEKDWD-------DVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV-  150 (248)
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHH-------HHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC-
Confidence            89999999974321  11111112222       2347898888888877643    33 4689999998654332211 


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                          ..|..+|...+.+.+       ..++++++++||++..+.....    ..........+  ...+++++|+|++++
T Consensus       151 ----~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~  224 (248)
T TIGR01832       151 ----PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIP--AGRWGTPDDIGGPAV  224 (248)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCC--CCCCcCHHHHHHHHH
Confidence                358999999887665       2489999999999987743210    00000000111  235789999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++....  ..|+++.+.+
T Consensus       225 ~l~s~~~~~~~G~~i~~dg  243 (248)
T TIGR01832       225 FLASSASDYVNGYTLAVDG  243 (248)
T ss_pred             HHcCccccCcCCcEEEeCC
Confidence            9997543  3466666654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.82  E-value=3.4e-19  Score=157.61  Aligned_cols=214  Identities=16%  Similarity=0.047  Sum_probs=146.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++++|||||+|+||++++++|+++  |++|++++|+.++.+.+       ..++.++++|++|++.+.++++       
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4688999999999999999999999  99999999987654332       2346789999999998876664       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-----CCCeEEEEccCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-----GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-----~vk~~v~~SS~~~~~~~~~~  221 (331)
                      ++|+|||++|.....  .........+       ....++|+.++.++++++...     +.++||++||..+.....+.
T Consensus        89 ~id~vi~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~  159 (259)
T PRK08213         89 HVDILVNNAGATWGA--PAEDHPVEAW-------DKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE  159 (259)
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc
Confidence            589999999863221  0111111122       223378999999999987554     66799999998654433321


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hh-hhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IR-ELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                       ......|..+|...+.+++       .+++++++++||++.++... .. ..........+  ...+...+|+++.+..
T Consensus       160 -~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~  236 (259)
T PRK08213        160 -VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTP--LGRLGDDEDLKGAALL  236 (259)
T ss_pred             -ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCC--CCCCcCHHHHHHHHHH
Confidence             1122569999999987765       25899999999998776422 11 11100000001  1123568999999988


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++....  ..|+.+++.+
T Consensus       237 l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        237 LASDASKHITGQILAVDG  254 (259)
T ss_pred             HhCccccCccCCEEEECC
Confidence            886543  4577888775

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.82  E-value=2.8e-19  Score=156.54  Aligned_cols=211  Identities=15%  Similarity=0.100  Sum_probs=143.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +++++++||||+|+||+++++.|+++  |+.|++..|+.++.+.+    ..++.++.+|++|.+.+.++++       ++
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34678999999999999999999999  99999888887665443    3357889999999998887653       58


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||+|......  +......+++       ...++|+.+..++++++.    +.+.++||++||..+.......   
T Consensus        82 d~vi~~ag~~~~~~--~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  149 (245)
T PRK12936         82 DILVNNAGITKDGL--FVRMSDEDWD-------SVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQ---  149 (245)
T ss_pred             CEEEECCCCCCCCc--cccCCHHHHH-------HHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCC---
Confidence            99999999743210  1111112222       334889998877777653    3466799999997654332211   


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhcc-CCccccCCcccccCHHHHHHHHHHHhc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVG-KDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                        ..|..+|...+.+.+       ..++++++++||++.++..... ..... .....+  ...+.+.+|+++++..++.
T Consensus       150 --~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ia~~~~~l~~  225 (245)
T PRK12936        150 --ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIP--MKRMGTGAEVASAVAYLAS  225 (245)
T ss_pred             --cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCC--CCCCcCHHHHHHHHHHHcC
Confidence              348888887665543       3589999999998866532110 00000 000111  1235679999999998886


Q ss_pred             Ccc--cCCceEEecc
Q 046297          296 FEE--AKFKAFDLAS  308 (331)
Q Consensus       296 ~~~--~~~~~~~i~~  308 (331)
                      .+.  ..|+.+++.+
T Consensus       226 ~~~~~~~G~~~~~~~  240 (245)
T PRK12936        226 SEAAYVTGQTIHVNG  240 (245)
T ss_pred             ccccCcCCCEEEECC
Confidence            543  3588999887

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.9e-19  Score=157.55  Aligned_cols=200  Identities=21%  Similarity=0.200  Sum_probs=139.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ++||||||+|+||+++++.|+++  |++|++++|++++.+.+       ...+.++.+|+.|++.+.++++       ++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARA--GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999  99999999987554322       2347788999999998887775       68


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      |+||||+|......  +.+.  .+++    ......++|+.++.++++.+..   .+.+++|++||..++.+..+.    
T Consensus        80 d~vi~~ag~~~~~~--~~~~--~~~~----~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----  147 (263)
T PRK06181         80 DILVNNAGITMWSR--FDEL--TDLS----VFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTR----  147 (263)
T ss_pred             CEEEECCCcccccc--hhcc--CCHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCc----
Confidence            99999998643211  1111  0111    1122348899999999888753   245789999998765433222    


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcc-ccCCcccccCHHHHHHHHHHHhcCc
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDE-LLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                       ..|+.+|...+.+.+       +.++++++++||++..+.........+.... .+.....+++++|+|++++.+++..
T Consensus       148 -~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        148 -SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCC
Confidence             469999999887764       3689999999999987643211000111111 1111236799999999999999754

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.82  E-value=6.6e-19  Score=153.53  Aligned_cols=203  Identities=19%  Similarity=0.229  Sum_probs=141.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C--CCCcEEEccCCCcccHHHHhc-------C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G--GADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~--~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      .+++|+||||+|+||++++++|+++  |++|++++|++++...+    .  ..+.++++|+.|++++.++++       +
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAE--GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999  99999999987654432    2  347889999999998887775       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      +|+|||++|.....  .+.       +...++.....++|+.+...+++++.+   .+.++||++||..+..+...    
T Consensus        83 ~d~vi~~ag~~~~~--~~~-------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----  149 (237)
T PRK07326         83 LDVLIANAGVGHFA--PVE-------ELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG----  149 (237)
T ss_pred             CCEEEECCCCCCCC--chh-------hCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC----
Confidence            89999999864321  000       111111123347788888888777653   35578999999865433221    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                       ...|..+|...+.+.+       ..+++++++|||++.++.....   ..      ......+..+|+++.++.++..+
T Consensus       150 -~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~---~~------~~~~~~~~~~d~a~~~~~~l~~~  219 (237)
T PRK07326        150 -GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT---PS------EKDAWKIQPEDIAQLVLDLLKMP  219 (237)
T ss_pred             -CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc---cc------hhhhccCCHHHHHHHHHHHHhCC
Confidence             2458899987765544       3689999999999977643110   00      00112478999999999999876


Q ss_pred             c-cCCceEEecc
Q 046297          298 E-AKFKAFDLAS  308 (331)
Q Consensus       298 ~-~~~~~~~i~~  308 (331)
                      . .....+.+..
T Consensus       220 ~~~~~~~~~~~~  231 (237)
T PRK07326        220 PRTLPSKIEVRP  231 (237)
T ss_pred             ccccccceEEec
Confidence            4 3334555654

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.7e-19  Score=153.61  Aligned_cols=207  Identities=14%  Similarity=0.090  Sum_probs=140.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc------CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ------GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~------~~d~Vi~~  154 (331)
                      ..++|+||||+|+||+++++.|+++  |++|+++.|+.++.  .  ..+++.+|+.|++.+.++++      ++|+||||
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~~--~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAIDD--F--PGELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCcccc--c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            3578999999999999999999999  99999999987541  1  23688999999998887775      68999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      +|......  +......+       ....+++|+.+...+.    +.+++.+.++||++||...+..  +    ....|.
T Consensus        76 ag~~~~~~--~~~~~~~~-------~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--~----~~~~Y~  140 (234)
T PRK07577         76 VGIALPQP--LGKIDLAA-------LQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA--L----DRTSYS  140 (234)
T ss_pred             CCCCCCCC--hHHCCHHH-------HHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC--C----CchHHH
Confidence            99743210  00011111       2233477777765554    4455667889999999864311  1    125699


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC-ccc-cCC-cccccCHHHHHHHHHHHhcCcc--
Q 046297          231 VWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD-DEL-LQT-ETRTIARADVAEVCIQALQFEE--  298 (331)
Q Consensus       231 ~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-~~~-~~~-~~~~i~v~Dva~~~~~~l~~~~--  298 (331)
                      .+|...+.+.+       +.+++++++|||.+.++............ ... ... ......++|+|++++.++..+.  
T Consensus       141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  220 (234)
T PRK07577        141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGF  220 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence            99999886654       35899999999999876421100000000 000 000 1123578999999999997653  


Q ss_pred             cCCceEEecc
Q 046297          299 AKFKAFDLAS  308 (331)
Q Consensus       299 ~~~~~~~i~~  308 (331)
                      ..|+.+.+.+
T Consensus       221 ~~g~~~~~~g  230 (234)
T PRK07577        221 ITGQVLGVDG  230 (234)
T ss_pred             ccceEEEecC
Confidence            4578888876

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.9e-19  Score=157.68  Aligned_cols=201  Identities=15%  Similarity=0.092  Sum_probs=136.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-CCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-GIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-~~d~Vi~  153 (331)
                      +++||||||+|+||+++++.|+++  |++|++++|++++...+       ...+.++.+|+.|++.+.+++. ++|+|||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~   79 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN   79 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence            467999999999999999999999  99999999987554332       2247889999999999998887 8999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      |+|......  .......+++.       ..++|+.+...    +++.+++.+.++||++||..+......     ...|
T Consensus        80 ~ag~~~~~~--~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~-----~~~Y  145 (257)
T PRK09291         80 NAGIGEAGA--VVDIPVELVRE-------LFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF-----TGAY  145 (257)
T ss_pred             CCCcCCCcC--cccCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC-----cchh
Confidence            999743210  00111111112       23667776544    455566677789999999865433211     2468


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-----hhhhhccCCcccc----CCcccccCHHHHHHHHHHH
Q 046297          230 LVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-----IRELLVGKDDELL----QTETRTIARADVAEVCIQA  293 (331)
Q Consensus       230 ~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-----~~~~~~~~~~~~~----~~~~~~i~v~Dva~~~~~~  293 (331)
                      ..+|..+|.+.+       ..++++++||||++..+...     ...........+.    ......++.+|+++.++.+
T Consensus       146 ~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (257)
T PRK09291        146 CASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEV  225 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHH
Confidence            999999886543       36999999999988654321     1111101100011    1223457899999999998


Q ss_pred             hcCcc
Q 046297          294 LQFEE  298 (331)
Q Consensus       294 l~~~~  298 (331)
                      +..+.
T Consensus       226 l~~~~  230 (257)
T PRK09291        226 IPADT  230 (257)
T ss_pred             hcCCC
Confidence            87654

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-18  Score=154.80  Aligned_cols=208  Identities=13%  Similarity=0.081  Sum_probs=146.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.++++|||||+|+||+++++.|+++  |++|++++|++++.+++       ...+.++.+|++|++.+.++++      
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45788999999999999999999999  99999999987654432       2347788999999998877665      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH-----cCCCeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA-----AGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~-----~~vk~~v~~SS~~~~~~~~~  220 (331)
                       ++|+|||+||.....  .+......+++       ..+++|+.++.++++++..     .+.++||++||..+.....+
T Consensus        86 ~~id~vi~~Ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  156 (263)
T PRK07814         86 GRLDIVVNNVGGTMPN--PLLSTSTKDLA-------DAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG  156 (263)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHH-------HHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC
Confidence             689999999863221  11111222223       3348899999999988863     45678999999876443322


Q ss_pred             CCCCCcchHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcch-------hhhhccCCccccCCcccccCHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGI-------RELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                           ...|+.+|..++.+.+.      .+++++.++||++..+....       ...+.+.   .+  .......+|+|
T Consensus       157 -----~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~va  226 (263)
T PRK07814        157 -----FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKA---TP--LRRLGDPEDIA  226 (263)
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhc---CC--CCCCcCHHHHH
Confidence                 24699999998887762      35789999999987653211       0011110   01  12246889999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++.++....  ..|+.+.+.+
T Consensus       227 ~~~~~l~~~~~~~~~g~~~~~~~  249 (263)
T PRK07814        227 AAAVYLASPAGSYLTGKTLEVDG  249 (263)
T ss_pred             HHHHHHcCccccCcCCCEEEECC
Confidence            99999987642  4567777765

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.2e-19  Score=156.71  Aligned_cols=210  Identities=16%  Similarity=0.102  Sum_probs=144.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +.+++++||||+|+||++++++|+++  |++|++++|+.++.+++    ..++.++++|+.|++++.++++       ++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            45689999999999999999999999  99999999987654432    3347889999999998887775       57


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      |+||||+|......  . ....+++       ...+++|+.+...+++++..   .+-.+||++||..+.......    
T Consensus        82 d~lv~~ag~~~~~~--~-~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~----  147 (261)
T PRK08265         82 DILVNLACTYLDDG--L-ASSRADW-------LAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGR----  147 (261)
T ss_pred             CEEEECCCCCCCCc--C-cCCHHHH-------HHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC----
Confidence            99999999643211  0 1111222       33348888888777776543   334689999998764332221    


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCc---ccc---CCcccccCHHHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDD---ELL---QTETRTIARADVAEVCIQ  292 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~---~~~---~~~~~~i~v~Dva~~~~~  292 (331)
                       ..|..+|...+.+.+       ..++++++|+||++..+....  ...+...   .+.   .....+...+|+|++++.
T Consensus       148 -~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~--~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~  224 (261)
T PRK08265        148 -WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDE--LSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAF  224 (261)
T ss_pred             -chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhh--hcccchhHHHHhhcccCCCCCccCHHHHHHHHHH
Confidence             358999999887665       258999999999987764211  1101000   000   001124578999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++..+.  ..|+.+.+.+
T Consensus       225 l~s~~~~~~tG~~i~vdg  242 (261)
T PRK08265        225 LCSDAASFVTGADYAVDG  242 (261)
T ss_pred             HcCccccCccCcEEEECC
Confidence            997643  4677888765

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4e-19  Score=156.67  Aligned_cols=213  Identities=15%  Similarity=0.133  Sum_probs=143.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+++++||||+|+||.+++++|+++  |++|++++|++++.+++       ..++.++.+|+.|++++.++++       
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999  99999999987665443       2246788999999998887775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHH----HHHHHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ----IDAAKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~l----l~aa~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||...... .+......+++..       .++|+.+...+    ++.+++.+.++||++||..+.....+  
T Consensus        83 ~id~li~~ag~~~~~~-~~~~~~~~~~~~~-------~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~--  152 (254)
T PRK07478         83 GLDIAFNNAGTLGEMG-PVAEMSLEGWRET-------LATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFP--  152 (254)
T ss_pred             CCCEEEECCCCCCCCC-ChhhCCHHHHHHH-------HHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCC--
Confidence            6899999999743211 1111122222333       38888765554    55556666778999999865422111  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh---hhccCCccccCCcccccCHHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE---LLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                        ....|..+|...+.+.+       ..++++++++||++..+......   ......... .....+..++|+|+.++.
T Consensus       153 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~  229 (254)
T PRK07478        153 --GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGL-HALKRMAQPEEIAQAALF  229 (254)
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence              11459999999887665       35799999999999776321100   000000000 001234689999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.  ..|+++.+.+
T Consensus       230 l~s~~~~~~~G~~~~~dg  247 (254)
T PRK07478        230 LASDAASFVTGTALLVDG  247 (254)
T ss_pred             HcCchhcCCCCCeEEeCC
Confidence            887643  4577787765

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.82  E-value=7.2e-19  Score=155.96  Aligned_cols=216  Identities=13%  Similarity=0.004  Sum_probs=147.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ..++++|||||+|+||+++++.|+++  |++|++++|++++.+++        ..++.++.+|++|++++.++++     
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence            34678999999999999999999999  99999999987654332        2247789999999998888775     


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHH----HHHHHHHHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQ----KNQIDAAKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~----~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|++|||+|.....  .+...+.++++..       +++|+.+.    +.+++.+++.+.+++|++||..+..+... 
T Consensus        84 g~iD~lv~nag~~~~~--~~~~~~~~~~~~~-------~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~-  153 (263)
T PRK08339         84 GEPDIFFFSTGGPKPG--YFMEMSMEDWEGA-------VKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPN-  153 (263)
T ss_pred             CCCcEEEECCCCCCCC--CcccCCHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCc-
Confidence             589999999964321  1112222333333       37787664    45555666667779999999876432211 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-------------hhhccCCccccCCccccc
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-------------ELLVGKDDELLQTETRTI  281 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-------------~~~~~~~~~~~~~~~~~i  281 (331)
                          ...|..+|...+.+.+       ..|++++.|.||++..+.....             ..........+.  ..+.
T Consensus       154 ----~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~r~~  227 (263)
T PRK08339        154 ----IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL--GRLG  227 (263)
T ss_pred             ----chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc--ccCc
Confidence                1358889998876655       3689999999999977632100             000000001111  2356


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCC
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      .++|+|++++.++..+.  ..|+++.+.+   |...+
T Consensus       228 ~p~dva~~v~fL~s~~~~~itG~~~~vdg---G~~~~  261 (263)
T PRK08339        228 EPEEIGYLVAFLASDLGSYINGAMIPVDG---GRLNS  261 (263)
T ss_pred             CHHHHHHHHHHHhcchhcCccCceEEECC---Ccccc
Confidence            78999999999887643  4677888876   55443

>PRK06196 oxidoreductase; Provisional

Probab=99.82  E-value=1.5e-18  Score=158.01  Aligned_cols=206  Identities=15%  Similarity=0.042  Sum_probs=136.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      +.+++|+||||+|+||++++++|+++  |++|++++|++++.++..   ..+.++++|++|.+++.++++       ++|
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCC
Confidence            34678999999999999999999999  999999999976654432   237899999999998887764       589


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCC-----
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHP-----  220 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~-----  220 (331)
                      +||||||..... .   ......++..       +++|+.+...    +++.+++.+..+||++||.+......+     
T Consensus       102 ~li~nAg~~~~~-~---~~~~~~~~~~-------~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  170 (315)
T PRK06196        102 ILINNAGVMACP-E---TRVGDGWEAQ-------FATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPH  170 (315)
T ss_pred             EEEECCCCCCCC-C---ccCCccHHHH-------HHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccC
Confidence            999999964321 0   1111222233       3788888544    455566666679999999754211100     


Q ss_pred             -CCCC-CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc---CCcc--cccCHHHH
Q 046297          221 -LNSL-GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL---QTET--RTIARADV  286 (331)
Q Consensus       221 -~~~~-~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~---~~~~--~~i~v~Dv  286 (331)
                       ..++ ....|+.+|...+.+.+       ..|+++++++||++.++................   ....  .+.+++|+
T Consensus       171 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (315)
T PRK06196        171 FTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQG  250 (315)
T ss_pred             ccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHH
Confidence             0111 12569999999876653       358999999999999885321100000000000   0000  24578999


Q ss_pred             HHHHHHHhcCcc
Q 046297          287 AEVCIQALQFEE  298 (331)
Q Consensus       287 a~~~~~~l~~~~  298 (331)
                      |..++.++..+.
T Consensus       251 a~~~~~l~~~~~  262 (315)
T PRK06196        251 AATQVWAATSPQ  262 (315)
T ss_pred             HHHHHHHhcCCc
Confidence            999999887653

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.82  E-value=7e-19  Score=158.44  Aligned_cols=196  Identities=15%  Similarity=0.147  Sum_probs=138.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++|+||||+|+||+++++.|+++  |++|++++|+.++.+++       ...+.++++|+.|++++.++++      
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARR--GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45688999999999999999999999  99999999997665443       2236788999999998888876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||......       ..+....+++....+++|+.+...++++    +++.+.++||++||.++..+..|.
T Consensus       116 g~id~li~~AG~~~~~~-------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~  188 (293)
T PRK05866        116 GGVDILINNAGRSIRRP-------LAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPL  188 (293)
T ss_pred             CCCCEEEECCCCCCCcc-------hhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCC
Confidence             7899999999643211       1111011112233447888886666554    456677899999998654322221


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                          ...|+.+|+..+.+.+       +.++++++++||.+-++....      . ..  ......++.+++|+.++.++
T Consensus       189 ----~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~------~-~~--~~~~~~~~pe~vA~~~~~~~  255 (293)
T PRK05866        189 ----FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP------T-KA--YDGLPALTADEAAEWMVTAA  255 (293)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc------c-cc--ccCCCCCCHHHHHHHHHHHH
Confidence                1469999999887654       358999999999887664210      0 00  01223478999999999999


Q ss_pred             cCc
Q 046297          295 QFE  297 (331)
Q Consensus       295 ~~~  297 (331)
                      +.+
T Consensus       256 ~~~  258 (293)
T PRK05866        256 RTR  258 (293)
T ss_pred             hcC
Confidence            864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=4.1e-19  Score=155.63  Aligned_cols=211  Identities=15%  Similarity=0.042  Sum_probs=143.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ++++||||||+|+||+++++.|+++  |++|+++ .|++++...+       ..++.++.+|++|++.+.++++      
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999  9999998 8886554322       2247889999999998887775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+|||++|.....  ...+.....+       ...+++|+.+..++++++.    +.+.++||++||..........
T Consensus        82 ~~id~vi~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~  152 (247)
T PRK05565         82 GKIDILVNNAGISNFG--LVTDMTDEEW-------DRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCE  152 (247)
T ss_pred             CCCCEEEECCCcCCCC--ChhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCc
Confidence             799999999975221  0111111112       2233788888777766654    4456789999998654332221


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh-hhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE-LLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                           ..|..+|...+.+++       ..++++++++||.+.++...... ........ ......+..++|+++.++.+
T Consensus       153 -----~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l  226 (247)
T PRK05565        153 -----VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAE-EIPLGRLGKPEEIAKVVLFL  226 (247)
T ss_pred             -----cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence                 358889887666554       35899999999998765432110 00000000 01123357899999999999


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +....  ..|+.+++.+
T Consensus       227 ~~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        227 ASDDASYITGQIITVDG  243 (247)
T ss_pred             cCCccCCccCcEEEecC
Confidence            87643  4677888876

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6e-19  Score=155.40  Aligned_cols=216  Identities=16%  Similarity=0.162  Sum_probs=148.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      +.+++++||||+|+||+++++.|+++  |++|++++|++++ ......+.++++|+.|++++.++++       ++|+||
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPE-TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhh-hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34688999999999999999999999  9999999998754 2223457889999999998887775       469999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH-----cCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA-----AGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~-----~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      ||+|......  .......+++       ..+++|+.++..+++++..     .+..+||++||..+..+....     .
T Consensus        81 ~~ag~~~~~~--~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-----~  146 (252)
T PRK07856         81 NNAGGSPYAL--AAEASPRFHE-------KIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGT-----A  146 (252)
T ss_pred             ECCCCCCCCC--cccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCC-----c
Confidence            9999643211  1111112222       3348899999988887753     234689999998765433221     4


Q ss_pred             hHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          228 NILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       228 ~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      .|..+|...+.+.+.      ..++++.++||.+.++.....    ..........+  ...+..++|+|+.++.++...
T Consensus       147 ~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        147 AYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP--LGRLATPADIAWACLFLASDL  224 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC--CCCCcCHHHHHHHHHHHcCcc
Confidence            599999999887762      238899999999977642110    00000000111  123467899999999988764


Q ss_pred             c--cCCceEEeccCCCCCCCCH
Q 046297          298 E--AKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       298 ~--~~~~~~~i~~~~~~~~~t~  317 (331)
                      .  ..|+.+.+.+   |...+.
T Consensus       225 ~~~i~G~~i~vdg---g~~~~~  243 (252)
T PRK07856        225 ASYVSGANLEVHG---GGERPA  243 (252)
T ss_pred             cCCccCCEEEECC---CcchHH
Confidence            3  4678888887   654443

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.81  E-value=9.5e-19  Score=154.33  Aligned_cols=213  Identities=14%  Similarity=0.086  Sum_probs=143.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh----c---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK----I---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++++||||+|+||++++++|+++  |++|++++|+.++ .+.    +   ..++.++++|++|++++.++++     
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999  9999999997542 221    2   2347789999999998887765     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||+|.....  ........+++..       .++|+.+...++++    +++.+.++||++||..+......
T Consensus        84 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  154 (254)
T PRK06114         84 LGALTLAVNAAGIANAN--PAEEMEEEQWQTV-------MDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG  154 (254)
T ss_pred             cCCCCEEEECCCCCCCC--ChHhCCHHHHHHH-------HhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC
Confidence              479999999974321  1111222223333       37888887665554    44556679999999875432221


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh---hccCCccccCCcccccCHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL---LVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~---~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      .   ....|..+|...+.+.+       ..|+++++++||++.++.......   ........+-  ..+..++|++.++
T Consensus       155 ~---~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~--~r~~~~~dva~~~  229 (254)
T PRK06114        155 L---LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM--QRMAKVDEMVGPA  229 (254)
T ss_pred             C---CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC--CCCcCHHHHHHHH
Confidence            1   12459999998876654       368999999999998764321000   0000001111  1346789999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.+..  ..|+++.+.+
T Consensus       230 ~~l~s~~~~~~tG~~i~~dg  249 (254)
T PRK06114        230 VFLLSDAASFCTGVDLLVDG  249 (254)
T ss_pred             HHHcCccccCcCCceEEECc
Confidence            99887543  4677887775

>PRK06398 aldose dehydrogenase; Validated

Probab=99.81  E-value=1.5e-18  Score=153.48  Aligned_cols=209  Identities=17%  Similarity=0.102  Sum_probs=143.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|+.+...    .+.++++|++|++++.++++       ++|+||
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPSYN----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCccccC----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45689999999999999999999999  999999999865432    47889999999998887775       589999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||||.....  .+......++       ...+++|+.++..+++++.    +.+.++||++||..+..+..+.     ..
T Consensus        78 ~~Ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----~~  143 (258)
T PRK06398         78 NNAGIESYG--AIHAVEEDEW-------DRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNA-----AA  143 (258)
T ss_pred             ECCCCCCCC--CcccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCC-----ch
Confidence            999974321  1111112222       2334889999877776654    4456799999998765432222     45


Q ss_pred             HHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcchh-hhhccCCcc--------cc-C-CcccccCHHHHHHHHH
Q 046297          229 ILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGIR-ELLVGKDDE--------LL-Q-TETRTIARADVAEVCI  291 (331)
Q Consensus       229 y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~--------~~-~-~~~~~i~v~Dva~~~~  291 (331)
                      |+.+|...+.+.+.      .+++++.++||++..+..... ....+....        +. . ....+..++|+|++++
T Consensus       144 Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~  223 (258)
T PRK06398        144 YVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVA  223 (258)
T ss_pred             hhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHH
Confidence            99999998877662      248999999999876532110 000000000        00 0 0123468999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++....  ..|+.+.+.+
T Consensus       224 ~l~s~~~~~~~G~~i~~dg  242 (258)
T PRK06398        224 FLASDLASFITGECVTVDG  242 (258)
T ss_pred             HHcCcccCCCCCcEEEECC
Confidence            9887543  4677787776

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.2e-19  Score=155.44  Aligned_cols=208  Identities=16%  Similarity=0.137  Sum_probs=145.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh---c-CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK---I-GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~---l-~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .+++||||||+|+||+++++.|+++  |++|++++|+++....   + ...+.++.+|++|++++.++++       ++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999  9999999998653221   1 1235689999999998887765       579


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +||||+|.....  .+......+++       ...++|+.+..++++++..    .+.++||++||..+..+...     
T Consensus        92 ~vi~~ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  157 (255)
T PRK06841         92 ILVNSAGVALLA--PAEDVSEEDWD-------KTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER-----  157 (255)
T ss_pred             EEEECCCCCCCC--ChhhCCHHHHH-------HHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC-----
Confidence            999999974321  11111112222       2348899998888887653    46679999999865433221     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC-----CccccCCcccccCHHHHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK-----DDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~-----~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      ...|+.+|...+.+.+       ..+++++.|+||.+..+.....  ..+.     ....+  ...+.+++|+|++++.+
T Consensus       158 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~l  233 (255)
T PRK06841        158 HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA--WAGEKGERAKKLIP--AGRFAYPEEIAAAALFL  233 (255)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc--cchhHHHHHHhcCC--CCCCcCHHHHHHHHHHH
Confidence            1459999998876654       2589999999999987753210  0000     00111  12467999999999999


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +..+.  ..|+++.+.+
T Consensus       234 ~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        234 ASDAAAMITGENLVIDG  250 (255)
T ss_pred             cCccccCccCCEEEECC
Confidence            97653  4678888876

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.6e-19  Score=156.82  Aligned_cols=198  Identities=14%  Similarity=0.033  Sum_probs=137.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-----CCCcEEEccCCCcccHHHHhc--------CC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-----GADDLFIGDIRDSNSIIPAIQ--------GI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-----~~~~~v~~Dl~d~~~~~~~l~--------~~  148 (331)
                      ++++|||||+|+||++++++|+++  |++|++++|+++..+++.     ..+.++++|++|.+++.++++        ++
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRL   78 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            467999999999999999999999  999999999987655432     358899999999998887765        46


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||.....  .+......+++       ..+++|+.++..+++++.    +.+..+||++||..+......    
T Consensus        79 d~vi~~ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  145 (260)
T PRK08267         79 DVLFNNAGILRGG--PFEDIPLEAHD-------RVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG----  145 (260)
T ss_pred             CEEEECCCCCCCC--ccccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC----
Confidence            9999999974321  11111222222       334889999888877764    445679999999865433221    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                       ...|+.+|...+.+.+       ..++++++++||++..+....  ................+..+|+|++++.+++.+
T Consensus       146 -~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        146 -LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG--TSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             -chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc--ccchhhhhhHhhccCCCCHHHHHHHHHHHHhCC
Confidence             2458899998876654       357999999999987653221  000000000011112367899999999999654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.81  E-value=1.1e-18  Score=152.16  Aligned_cols=189  Identities=20%  Similarity=0.143  Sum_probs=137.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc---CCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ---GIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~ag  156 (331)
                      .+++|+||||+|+||+++++.|+++  |+ +|++++|+.++.++...++.++.+|+.|++.+.++++   .+|+|||++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            4578999999999999999999999  98 9999999877655444468899999999999888876   4899999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcchHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVW  232 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~s  232 (331)
                      ...... .+......+++       ...++|+.+...+++++.    +.+.++||++||..++.+..+     ...|+.+
T Consensus        83 ~~~~~~-~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~-----~~~y~~s  149 (238)
T PRK08264         83 IFRTGS-LLLEGDEDALR-------AEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN-----LGTYSAS  149 (238)
T ss_pred             cCCCCC-ccccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC-----chHhHHH
Confidence            732211 11111122222       233788888888887754    456778999999876443222     1469999


Q ss_pred             HHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          233 KRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       233 K~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      |..+|.+.+       +.+++++++|||.+.++...      +.       ....++.+|+++.++..+...
T Consensus       150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~------~~-------~~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA------GL-------DAPKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc------cC-------CcCCCCHHHHHHHHHHHHhCC
Confidence            999887655       25899999999999766421      00       112578899999999888754

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-18  Score=152.47  Aligned_cols=211  Identities=15%  Similarity=0.052  Sum_probs=142.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +.+++|+||||+|+||++++++|+++  |++|++++|+++...+    +..++.++++|+.|.+++.++++       ++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAE--GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            34678999999999999999999999  9999999998765443    23357789999999887765543       68


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      |+||||+|.....  .+......+++..       .++|+.++.++++++...  ...++|+++|..+.....     ..
T Consensus        82 d~vi~~ag~~~~~--~~~~~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~-----~~  147 (249)
T PRK06500         82 DAVFINAGVAKFA--PLEDWDEAMFDRS-------FNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP-----NS  147 (249)
T ss_pred             CEEEECCCCCCCC--ChhhCCHHHHHHH-------HHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC-----Cc
Confidence            9999999864321  1111122233333       489999999999998742  235788877765432221     12


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--------hhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--------RELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                      ..|+.+|...|.+++       ..+++++++|||.++++....        ...........+  ...+.+++|+|++++
T Consensus       148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~  225 (249)
T PRK06500        148 SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVP--LGRFGTPEEIAKAVL  225 (249)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCC--CCCCcCHHHHHHHHH
Confidence            569999999988774       248999999999999874210        000000000001  012458899999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.++.  ..|..+.+.+
T Consensus       226 ~l~~~~~~~~~g~~i~~~g  244 (249)
T PRK06500        226 YLASDESAFIVGSEIIVDG  244 (249)
T ss_pred             HHcCccccCccCCeEEECC
Confidence            9887543  3455666654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.81  E-value=1.1e-18  Score=152.89  Aligned_cols=209  Identities=14%  Similarity=0.079  Sum_probs=142.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh-------cCCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK-------IGGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++++||||+|+||+++++.|+++  |++|++++|+... ...       ...++.++.+|+.|.+.+.++++       
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   79 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG   79 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            358999999999999999999999  9999999998531 111       12347899999999998887765       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHH----HHHHHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ----IDAAKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~l----l~aa~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+|||++|......  +......+++.       ..++|+.+..++    ++.+++.+.++||++||..+......  
T Consensus        80 ~id~vi~~ag~~~~~~--~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--  148 (245)
T PRK12824         80 PVDILVNNAGITRDSV--FKRMSHQEWND-------VINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG--  148 (245)
T ss_pred             CCCEEEECCCCCCCCc--cccCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC--
Confidence            4899999999743210  11111222223       337888887776    44556667789999999876533221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hhhh-ccCCccccCCcccccCHHHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RELL-VGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                         ...|..+|...+.+.+       ..++++++++||++.++.... .... .......+  ...+..++|+++++..+
T Consensus       149 ---~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~l  223 (245)
T PRK12824        149 ---QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIP--MKRLGTPEEIAAAVAFL  223 (245)
T ss_pred             ---ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCC--CCCCCCHHHHHHHHHHH
Confidence               2459999988776654       358999999999998764321 0000 00000001  12356889999999888


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +....  ..|+.+++.+
T Consensus       224 ~~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        224 VSEAAGFITGETISING  240 (245)
T ss_pred             cCccccCccCcEEEECC
Confidence            86542  4688999987

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.1e-18  Score=152.55  Aligned_cols=190  Identities=14%  Similarity=0.079  Sum_probs=138.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhcC----CCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQG----IDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~~----~d~Vi~~  154 (331)
                      +++++||||+|+||+++++.|+++  |++|++++|++++.+++.   .++.++.+|++|++++.+++++    .|.++||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~   78 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN   78 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence            367999999999999999999999  999999999987665542   3478999999999999998874    5899999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVW  232 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~s  232 (331)
                      +|......     ..    +...++...++++|+.++.++++++...  +.+++|++||..+..+..     ....|+.+
T Consensus        79 ag~~~~~~-----~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-----~~~~Y~as  144 (240)
T PRK06101         79 AGDCEYMD-----DG----KVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP-----RAEAYGAS  144 (240)
T ss_pred             CcccccCC-----CC----CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC-----CCchhhHH
Confidence            98532111     00    1111111234589999999999988753  235899999876533221     12459999


Q ss_pred             HHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          233 KRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       233 K~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      |..++.+.+       ..++++++++||+++++......      ..    ....++.+|+|+.++..++.+
T Consensus       145 K~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------~~----~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        145 KAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT------FA----MPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC------CC----CCcccCHHHHHHHHHHHHhcC
Confidence            999887754       46899999999999887532110      00    011378999999999999875

>PRK07985 oxidoreductase; Provisional

Probab=99.81  E-value=1.1e-18  Score=157.21  Aligned_cols=212  Identities=14%  Similarity=0.111  Sum_probs=145.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc--hhhhc-------CCCCcEEEccCCCcccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE--SKQKI-------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~--~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +.++++|||||+|+||+++++.|+++  |++|++..|+.+  ..+++       ...+.++.+|++|++++.++++    
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999  999998877532  22221       2246788999999988876664    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~  221 (331)
                         ++|++|||||...... .+......+++.       .+++|+.++..+++++...  .-.+||++||..++.+... 
T Consensus       125 ~~g~id~lv~~Ag~~~~~~-~~~~~~~~~~~~-------~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~-  195 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIP-DIADLTSEQFQK-------TFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH-  195 (294)
T ss_pred             HhCCCCEEEECCCCCcCCC-ChhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC-
Confidence               5899999998632211 111222233333       3489999999998887643  1258999999876543221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ...|+.+|...+.+.+       ..|+++++|+||++.++....    ...........+-  ..+..++|+|+++
T Consensus       196 ----~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~r~~~pedva~~~  269 (294)
T PRK07985        196 ----LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM--KRAGQPAELAPVY  269 (294)
T ss_pred             ----cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC--CCCCCHHHHHHHH
Confidence                1459999999886654       358999999999999885311    0000000001111  1356899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++..+.  ..|+++.+.+
T Consensus       270 ~fL~s~~~~~itG~~i~vdg  289 (294)
T PRK07985        270 VYLASQESSYVTAEVHGVCG  289 (294)
T ss_pred             HhhhChhcCCccccEEeeCC
Confidence            99987643  4577888876

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.7e-18  Score=158.66  Aligned_cols=207  Identities=15%  Similarity=0.150  Sum_probs=141.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++|+||||+|+||+++++.|+++  |++|++++|++++.+++       ..++.++.+|++|++++.++++      
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARR--GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            34678999999999999999999999  99999999987665432       2347789999999999887764      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHH----HHHHHHHHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQ----KNQIDAAKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~----~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|++|||+|.....  .+.....++       ....+++|+.+.    +.+++.+++.+.++||++||..++.+... 
T Consensus        84 g~iD~lInnAg~~~~~--~~~~~~~~~-------~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~-  153 (334)
T PRK07109         84 GPIDTWVNNAMVTVFG--PFEDVTPEE-------FRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL-  153 (334)
T ss_pred             CCCCEEEECCCcCCCC--chhhCCHHH-------HHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc-
Confidence             689999999963221  111111111       123347776664    44566666666789999999987543221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                          ...|..+|...+.+.+         ..++++++|+||.+.++.........+.   .........+++|+|++++.
T Consensus       154 ----~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~---~~~~~~~~~~pe~vA~~i~~  226 (334)
T PRK07109        154 ----QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPV---EPQPVPPIYQPEVVADAILY  226 (334)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccc---cccCCCCCCCHHHHHHHHHH
Confidence                2569999998776543         1468999999999987642211110111   01112245789999999999


Q ss_pred             HhcCcccCCceEEecc
Q 046297          293 ALQFEEAKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~~~~~~~~i~~  308 (331)
                      ++.++   .+.+.++.
T Consensus       227 ~~~~~---~~~~~vg~  239 (334)
T PRK07109        227 AAEHP---RRELWVGG  239 (334)
T ss_pred             HHhCC---CcEEEeCc
Confidence            99876   23566653

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.1e-18  Score=152.92  Aligned_cols=190  Identities=16%  Similarity=0.095  Sum_probs=137.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc----CCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ----GID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~----~~d  149 (331)
                      +++|+||||+|+||++++++|+++  |++|++++|++++.+.+        ..++.++++|+.|++++.++++    .+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d   78 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPD   78 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence            468999999999999999999999  99999999987654432        2357899999999998887775    469


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +|||++|......  .       .+..+++.....++|+.+...+++++.    +.+.++||++||..+..+...     
T Consensus        79 ~vv~~ag~~~~~~--~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  144 (243)
T PRK07102         79 IVLIAVGTLGDQA--A-------CEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRAS-----  144 (243)
T ss_pred             EEEECCcCCCCcc--c-------ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCC-----
Confidence            9999998643211  1       111122222334789999888877654    456789999999865333221     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      ...|+.+|...+.+.+       +.++++++++||++.++....      .  ..+  .....+++|+++.++.+++.+
T Consensus       145 ~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~------~--~~~--~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        145 NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG------L--KLP--GPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc------c--CCC--ccccCCHHHHHHHHHHHHhCC
Confidence            1358899998776554       458999999999998873211      0  011  223578999999999999865

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.5e-18  Score=153.05  Aligned_cols=191  Identities=14%  Similarity=0.195  Sum_probs=134.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh----cC----CCCcEEEccCCCcccHHHHhc------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK----IG----GADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~----l~----~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .++|+||||+|+||++++++|++++ |++|++++|++++ .++    +.    .+++++.+|+.|++++.++++      
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNA-PARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            5689999999999999999999982 3899999998765 332    21    257899999999888665553      


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|++||++|.....     ...+.+++.    ..+.+++|+.+...    +++.+++.+..+||++||..+..+..+  
T Consensus        87 ~id~li~~ag~~~~~-----~~~~~~~~~----~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~--  155 (253)
T PRK07904         87 DVDVAIVAFGLLGDA-----EELWQNQRK----AVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRS--  155 (253)
T ss_pred             CCCEEEEeeecCCch-----hhcccCHHH----HHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCC--
Confidence            699999999874321     111111110    11234788877654    677778777889999999876443221  


Q ss_pred             CCCcchHHHHHHHHHHHH-------HhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          223 SLGNGNILVWKRKAEQYL-------ADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~-------~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                         ...|+.+|...+.+.       +.+++++++++||++..+...      ...     .....++.+|+|+.++.++.
T Consensus       156 ---~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~------~~~-----~~~~~~~~~~~A~~i~~~~~  221 (253)
T PRK07904        156 ---NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA------HAK-----EAPLTVDKEDVAKLAVTAVA  221 (253)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc------cCC-----CCCCCCCHHHHHHHHHHHHH
Confidence               135889998876443       357899999999999876321      000     01124789999999999998


Q ss_pred             Ccc
Q 046297          296 FEE  298 (331)
Q Consensus       296 ~~~  298 (331)
                      ++.
T Consensus       222 ~~~  224 (253)
T PRK07904        222 KGK  224 (253)
T ss_pred             cCC
Confidence            763

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.5e-18  Score=153.07  Aligned_cols=214  Identities=12%  Similarity=0.024  Sum_probs=140.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      +.+++|+||||+|+||++++++|+++  |++|++++|++.+.+.+..  ...++++|++|++.+.++++       ++|+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45688999999999999999999999  9999999998765443321  23688999999998888775       5799


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      |||++|........+.......+       ....++|+.+...+++.+    ++.+..++|++||..+.....+    +.
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~----~~  151 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAW-------QRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT----SQ  151 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHH-------HHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC----CC
Confidence            99999864321111111111112       233378888876655554    4555668999998654222110    11


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----hhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                      ..|+.+|+..+.+.+       ..++++++++||++.++.....     .........++.  ..+.+++|+++++..++
T Consensus       152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~~l~  229 (255)
T PRK06057        152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM--GRFAEPEEIAAAVAFLA  229 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHh
Confidence            358899977655443       3589999999999987742210     000000001111  24688999999998888


Q ss_pred             cCcc--cCCceEEecc
Q 046297          295 QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~  308 (331)
                      .+..  ..|+.+.+.+
T Consensus       230 ~~~~~~~~g~~~~~~~  245 (255)
T PRK06057        230 SDDASFITASTFLVDG  245 (255)
T ss_pred             CccccCccCcEEEECC
Confidence            6543  4567777765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.8e-18  Score=155.63  Aligned_cols=213  Identities=14%  Similarity=0.100  Sum_probs=147.2

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh----c---CCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK----I---GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~----l---~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ...+++||||||+|+||.+++++|+++  |++|+++.|+.+. .+.    +   ..++.++.+|+.|.+.+.++++    
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            344688999999999999999999999  9999999997532 111    1   2246789999999998887764    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~  221 (331)
                         ++|+||||||...... .+.....+++..       ..++|+.+..++++++...  ...+||++||..++......
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~-~~~~~~~~~~~~-------~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~  192 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQ-SLEDITAEQLDK-------TFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETL  192 (290)
T ss_pred             HcCCCCEEEECCcccCCCC-CcccCCHHHHHH-------HHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCc
Confidence               5899999999643211 111122222233       3488999999999888653  23589999998765433221


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                           ..|..+|...+.+.+       ..+++++.++||.+.++....   ...........  ....+.+++|+|++++
T Consensus       193 -----~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~  265 (290)
T PRK06701        193 -----IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNT--PMQRPGQPEELAPAYV  265 (290)
T ss_pred             -----chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcC--CcCCCcCHHHHHHHHH
Confidence                 358899999887655       258999999999998874211   00000000001  1234688999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++....  ..|+++++.+
T Consensus       266 ~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        266 FLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             HHcCcccCCccCcEEEeCC
Confidence            9987653  4678888886

>PRK08643 acetoin reductase; Validated

Probab=99.80  E-value=3e-18  Score=151.26  Aligned_cols=209  Identities=19%  Similarity=0.162  Sum_probs=141.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      ++++|||||+|+||+++++.|+++  |++|++++|+.++.+.+       ..++.++++|++|++.+.++++       +
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999  99999999987654332       2346789999999998877765       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~~~~~~  222 (331)
                      +|+||||+|......  +......++       ...+++|+.++..+++++.    +.+ -.+||++||..+......  
T Consensus        80 id~vi~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  148 (256)
T PRK08643         80 LNVVVNNAGVAPTTP--IETITEEQF-------DKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE--  148 (256)
T ss_pred             CCEEEECCCCCCCCC--cccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC--
Confidence            899999998643210  111111122       2334788888776666554    323 358999999865433221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hhhh---ccCCc---------cccCCcccccC
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RELL---VGKDD---------ELLQTETRTIA  282 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~~~---~~~~~---------~~~~~~~~~i~  282 (331)
                         ...|+.+|...+.+.+       ..|++++.|+||++.++.... ....   .+...         .++  ...+..
T Consensus       149 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  223 (256)
T PRK08643        149 ---LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT--LGRLSE  223 (256)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCC--CCCCcC
Confidence               2459999998876654       368999999999998764211 0000   00000         011  123568


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .+|+|+++..++....  ..|+.+.+.+
T Consensus       224 ~~~va~~~~~L~~~~~~~~~G~~i~vdg  251 (256)
T PRK08643        224 PEDVANCVSFLAGPDSDYITGQTIIVDG  251 (256)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEeCC
Confidence            9999999999887543  5677888776

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.1e-18  Score=151.36  Aligned_cols=205  Identities=12%  Similarity=0.059  Sum_probs=145.2

Q ss_pred             EEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhc---CCCEEEEccc
Q 046297           86 LVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQ---GIDALIILTS  156 (331)
Q Consensus        86 lVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~ag  156 (331)
                      |||||+|+||++++++|+++  |++|++++|++++.+.+      ..+++++.+|++|++++.++++   ++|++||++|
T Consensus         1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            69999999999999999999  99999999987654432      2357889999999999998886   4799999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKA  236 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~  236 (331)
                      .....  .+......++       ....++|+.+...+.++....+.++||++||..++....+.     ..|+.+|...
T Consensus        79 ~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~-----~~Y~~sK~a~  144 (230)
T PRK07041         79 DTPGG--PVRALPLAAA-------QAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASG-----VLQGAINAAL  144 (230)
T ss_pred             CCCCC--ChhhCCHHHH-------HHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcc-----hHHHHHHHHH
Confidence            74321  1111111222       33348899999999986665567899999998775443222     4699999999


Q ss_pred             HHHHHh-----cCCCEEEEecCcccCCCcch------hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEE
Q 046297          237 EQYLAD-----SGIPYTIIRAGGLQDKEGGI------RELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFD  305 (331)
Q Consensus       237 e~~~~~-----~~~~~~ilrp~~v~g~~~~~------~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  305 (331)
                      +.+.+.     .+++++.++||++.++....      ..........++.  .....++|+|++++.++.++...|+.|+
T Consensus       145 ~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~~~l~~~~~~~G~~~~  222 (230)
T PRK07041        145 EALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA--RRVGQPEDVANAILFLAANGFTTGSTVL  222 (230)
T ss_pred             HHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhcCCCcCCcEEE
Confidence            887763     35789999999886643110      0000000000111  1235789999999999987656688999


Q ss_pred             ecc
Q 046297          306 LAS  308 (331)
Q Consensus       306 i~~  308 (331)
                      +.+
T Consensus       223 v~g  225 (230)
T PRK07041        223 VDG  225 (230)
T ss_pred             eCC
Confidence            987

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.80  E-value=2.1e-18  Score=152.18  Aligned_cols=210  Identities=13%  Similarity=0.080  Sum_probs=146.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++|+||||+|+||+++++.|+++  |++|++++|+.+..+.+       ..++.++.+|++|.+++.++++      
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            44789999999999999999999999  99999999987654332       2246788999999998877654      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||+|.....  .+ .....++       ....++|+.+..++++++.    +.+..+||++||..+..+..+.
T Consensus        87 ~~~d~li~~ag~~~~~--~~-~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  156 (255)
T PRK06113         87 GKVDILVNNAGGGGPK--PF-DMPMADF-------RRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM  156 (255)
T ss_pred             CCCCEEEECCCCCCCC--CC-CCCHHHH-------HHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCc
Confidence             579999999964321  01 1111222       2234889999988888875    3445689999998764433222


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                           ..|+.+|...+.+++       ..+++++++.||.+..+....   ...........+  ...+..++|++++++
T Consensus       157 -----~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~a~~~~  229 (255)
T PRK06113        157 -----TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP--IRRLGQPQDIANAAL  229 (255)
T ss_pred             -----chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCC--CCCCcCHHHHHHHHH
Confidence                 459999999887775       357999999999997653210   000000000011  123568999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++....  ..|+.+++.+
T Consensus       230 ~l~~~~~~~~~G~~i~~~g  248 (255)
T PRK06113        230 FLCSPAASWVSGQILTVSG  248 (255)
T ss_pred             HHcCccccCccCCEEEECC
Confidence            9987543  4688999987

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1e-18  Score=154.64  Aligned_cols=210  Identities=15%  Similarity=0.016  Sum_probs=144.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .+++|+||||+|+||++++++|+++  |++|++++|++++.+++         ..++.++++|++|++++.++++     
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999  99999999987654432         1246789999999998887775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||......  .......++       ....++|+.+...+++++.    +.+.++||++||..+......
T Consensus        84 ~g~id~li~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (260)
T PRK07063         84 FGPLDVLVNNAGINVFAD--PLAMTDEDW-------RRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG  154 (260)
T ss_pred             hCCCcEEEECCCcCCCCC--hhhCCHHHH-------HHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC
Confidence              6899999999643211  001111222       2334788888877777653    445679999999876443322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h-------hhccCCccccCCcccccCHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E-------LLVGKDDELLQTETRTIARAD  285 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~-------~~~~~~~~~~~~~~~~i~v~D  285 (331)
                      .     ..|..+|...+.+.+       ..|++++.|+||++-.+..... .       .........+  ...+..++|
T Consensus       155 ~-----~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~  227 (260)
T PRK07063        155 C-----FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP--MKRIGRPEE  227 (260)
T ss_pred             c-----hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC--CCCCCCHHH
Confidence            2     459999999887765       2589999999999876542100 0       0000000011  123468899


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|++++.++.+..  ..|+.+.+.+
T Consensus       228 va~~~~fl~s~~~~~itG~~i~vdg  252 (260)
T PRK07063        228 VAMTAVFLASDEAPFINATCITIDG  252 (260)
T ss_pred             HHHHHHHHcCccccccCCcEEEECC
Confidence            9999999987643  4677777776

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=2.2e-18  Score=151.70  Aligned_cols=215  Identities=15%  Similarity=0.113  Sum_probs=143.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-Cchhhh----cCCCCcEEEccCCCcccHHHHhcC--------C
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQK----IGGADDLFIGDIRDSNSIIPAIQG--------I  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~~--------~  148 (331)
                      +++++||||+|+||+++++.|+++  |++|+++.|+ +++.+.    +...+.++++|+.|++++.++++.        +
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999  9999887654 333322    234578899999999988877752        8


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||+|......+.. ..  ..++..+++.....++|+.+...+++++.    +.+..+||++||.....+..+.   
T Consensus        83 d~li~~ag~~~~~~~~~-~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~---  156 (253)
T PRK08642         83 TTVVNNALADFSFDGDA-RK--KADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPY---  156 (253)
T ss_pred             eEEEECCCccccccccC-CC--CcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCc---
Confidence            99999998632111000 00  01111122223344889999888888775    3456799999987553332222   


Q ss_pred             CcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          225 GNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                        ..|+.+|...+.+.+.       .+++++.|+||++..+....   ...........+  ...+.+++|+|++++.++
T Consensus       157 --~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~l~  232 (253)
T PRK08642        157 --HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTP--LRKVTTPQEFADAVLFFA  232 (253)
T ss_pred             --cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCC--cCCCCCHHHHHHHHHHHc
Confidence              3599999999887762       57999999999997653211   000000000111  134689999999999999


Q ss_pred             cCcc--cCCceEEecc
Q 046297          295 QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~  308 (331)
                      ..+.  ..|+.+.+.+
T Consensus       233 ~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        233 SPWARAVTGQNLVVDG  248 (253)
T ss_pred             CchhcCccCCEEEeCC
Confidence            7543  5678888776

>PRK12743 oxidoreductase; Provisional

Probab=99.80  E-value=1.4e-18  Score=153.52  Aligned_cols=209  Identities=14%  Similarity=0.076  Sum_probs=142.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh-------cCCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK-------IGGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++||||||+|+||++++++|+++  |++|+++.|+. +..+.       ...++.++.+|++|++.+.++++       
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999  99999887643 32222       23357889999999988877664       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C-CCeEEEEccCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G-AKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-vk~~v~~SS~~~~~~~~~~  221 (331)
                      ++|+||||+|.....  .+......++       ....++|+.+...+++++...    + -++||++||.....+..+.
T Consensus        80 ~id~li~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~  150 (256)
T PRK12743         80 RIDVLVNNAGAMTKA--PFLDMDFDEW-------RKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGA  150 (256)
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCc
Confidence            589999999975431  1111122222       233488999998888876543    2 3589999998654333222


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                           ..|..+|...+.+.+       ..+++++.++||.+.++.....  ..........+.  ..+.+.+|++.+++.
T Consensus       151 -----~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~~~  223 (256)
T PRK12743        151 -----SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPL--GRPGDTHEIASLVAW  223 (256)
T ss_pred             -----chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCC--CCCCCHHHHHHHHHH
Confidence                 458899999887654       3589999999999998753210  110000111111  124688999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++....  ..|+++.+.+
T Consensus       224 l~~~~~~~~~G~~~~~dg  241 (256)
T PRK12743        224 LCSEGASYTTGQSLIVDG  241 (256)
T ss_pred             HhCccccCcCCcEEEECC
Confidence            887543  4578888876

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.1e-19  Score=156.19  Aligned_cols=196  Identities=18%  Similarity=0.167  Sum_probs=135.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      |+|+||||+|+||++++++|+++  |++|++++|+.++.+.+       ...+.++++|+.|++++.++++       ++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46999999999999999999999  99999999987654432       2347789999999988887764       68


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||+|......  +......++       ...+++|+.+...    +++.+++.+.++||++||..+..+...    
T Consensus        79 d~lI~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----  145 (270)
T PRK05650         79 DVIVNNAGVASGGF--FEELSLEDW-------DWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA----  145 (270)
T ss_pred             CEEEECCCCCCCCC--cccCCHHHH-------HHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC----
Confidence            99999999754321  111111111       2233677766555    445566777789999999876543322    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc-----CCcccccCHHHHHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL-----QTETRTIARADVAEVCIQ  292 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-----~~~~~~i~v~Dva~~~~~  292 (331)
                       ...|..+|...+.+.+       ..++++++++||++.++.....   ........     .....+++++|+|+.++.
T Consensus       146 -~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~  221 (270)
T PRK05650        146 -MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF---RGPNPAMKAQVGKLLEKSPITAADIADYIYQ  221 (270)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccccc---ccCchhHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence             2469999998665543       3589999999999987643210   00000000     011345899999999999


Q ss_pred             HhcCc
Q 046297          293 ALQFE  297 (331)
Q Consensus       293 ~l~~~  297 (331)
                      +++++
T Consensus       222 ~l~~~  226 (270)
T PRK05650        222 QVAKG  226 (270)
T ss_pred             HHhCC
Confidence            99864

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.80  E-value=1.5e-18  Score=152.94  Aligned_cols=211  Identities=13%  Similarity=-0.003  Sum_probs=144.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++..++       ...+.++.+|++|++.+.++++      
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            34678999999999999999999999  99999999987654432       1236678999999998887764      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||+|.....  .+......+++.       ..++|+.+...+++++.    +.+.++||++||..+.....+.
T Consensus        85 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  155 (254)
T PRK08085         85 GPIDVLINNAGIQRRH--PFTEFPEQEWND-------VIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTI  155 (254)
T ss_pred             CCCCEEEECCCcCCCC--ChhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCC
Confidence             489999999964321  111111222222       34888888777776654    3456799999997653322221


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                           ..|..+|...+.+.+       ..|+++++|+||++.++.....    ..........+  ...+...+|+++++
T Consensus       156 -----~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~va~~~  228 (254)
T PRK08085        156 -----TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP--AARWGDPQELIGAA  228 (254)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC--CCCCcCHHHHHHHH
Confidence                 459999999887765       3589999999999988743210    00000000111  12357899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++....  ..|+...+.+
T Consensus       229 ~~l~~~~~~~i~G~~i~~dg  248 (254)
T PRK08085        229 VFLSSKASDFVNGHLLFVDG  248 (254)
T ss_pred             HHHhCccccCCcCCEEEECC
Confidence            99887543  4567776665

>PRK08017 oxidoreductase; Provisional

Probab=99.80  E-value=9.4e-19  Score=154.34  Aligned_cols=199  Identities=18%  Similarity=0.169  Sum_probs=138.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhc--------CCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQ--------GIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~--------~~d~Vi~  153 (331)
                      ++|+||||+|+||+++++.|+++  |++|++++|+.++.+.+. .+++.+++|+.|.+.+.++++        ++|.++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            57999999999999999999999  999999999987665442 247889999999887766553        4689999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      ++|.....  ........++       ....++|+.++.+    +++.+++.+.+++|++||..+......     ...|
T Consensus        81 ~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-----~~~Y  146 (256)
T PRK08017         81 NAGFGVYG--PLSTISRQQM-------EQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG-----RGAY  146 (256)
T ss_pred             CCCCCCcc--chhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC-----ccHH
Confidence            99853211  1111111222       2334778887665    467777778889999999865433221     2469


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC-Cccc--cC-CcccccCHHHHHHHHHHHhcCcc
Q 046297          230 LVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK-DDEL--LQ-TETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       230 ~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~-~~~~--~~-~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      +.+|...|.+.+       ..++++++++||.+..+....  ...+. ....  +. ..+.+++++|+++.+..+++++.
T Consensus       147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN--VNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc--ccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            999999887543       468999999999886653211  11111 0111  11 12456999999999999998765


Q ss_pred             c
Q 046297          299 A  299 (331)
Q Consensus       299 ~  299 (331)
                      .
T Consensus       225 ~  225 (256)
T PRK08017        225 P  225 (256)
T ss_pred             C
Confidence            3

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.8e-18  Score=151.81  Aligned_cols=211  Identities=17%  Similarity=0.136  Sum_probs=139.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-Cchhhh----c---CCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQK----I---GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ++++|||||+|+||++++++|+++  |++|+++.++ ++....    +   ..++.++.+|++|.+.+.++++       
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAER--GYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            357999999999999999999999  9998877644 332222    1   2346789999999998888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc------C-CCeEEEEccCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA------G-AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~------~-vk~~v~~SS~~~~~~~~  219 (331)
                      ++|+||||+|...... .+.....+++       ....++|+.++.++++++.+.      + -++||++||..+.....
T Consensus        80 ~id~li~~ag~~~~~~-~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  151 (248)
T PRK06123         80 RLDALVNNAGILEAQM-RLEQMDAARL-------TRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP  151 (248)
T ss_pred             CCCEEEECCCCCCCCC-ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC
Confidence            5899999999743211 0111111122       233488999988888776543      1 13699999986543322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      ..    ...|+.+|...+.+++       +++++++++|||+++++....   ...........+-  ..+.+++|++++
T Consensus       152 ~~----~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~d~a~~  225 (248)
T PRK06123        152 GE----YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPM--GRGGTAEEVARA  225 (248)
T ss_pred             CC----ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCC--CCCcCHHHHHHH
Confidence            10    0249999999887654       248999999999999884321   0000000000110  112478999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++....  ..|+.|++.+
T Consensus       226 ~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        226 ILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             HHHHhCccccCccCCEEeecC
Confidence            999887543  4578899876

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.5e-18  Score=151.45  Aligned_cols=209  Identities=15%  Similarity=0.088  Sum_probs=140.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe-cCCchhhh----c---CCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV-RTEESKQK----I---GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~-R~~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++++||||+|+||++++++|+++  |++|++.. |+.++.++    +   ......+.+|+.+.+.+..+++       
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            578999999999999999999999  99998875 44333322    1   2236678899998876654332       


Q ss_pred             ------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCC
Q 046297          147 ------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~  218 (331)
                            ++|+||||||.....  .+.....++++       .++++|+.++..+++++...  +..+||++||..+....
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  152 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGA--FIEETTEQFFD-------RMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL  152 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCC--CcccCCHHHHH-------HHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC
Confidence                  589999999964221  11111222222       33379999998888877543  23589999998765432


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC-ccc---cCCcccccCHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD-DEL---LQTETRTIARADVA  287 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-~~~---~~~~~~~i~v~Dva  287 (331)
                      ...     ..|..+|..++.+.+       ..++++++++||++.++....  ...... ...   ......+.+++|+|
T Consensus       153 ~~~-----~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva  225 (252)
T PRK12747        153 PDF-----IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE--LLSDPMMKQYATTISAFNRLGEVEDIA  225 (252)
T ss_pred             CCc-----hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh--cccCHHHHHHHHhcCcccCCCCHHHHH
Confidence            221     469999999887665       358999999999998874311  110000 000   00112467899999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++..++....  ..|+.+.+.+
T Consensus       226 ~~~~~l~s~~~~~~~G~~i~vdg  248 (252)
T PRK12747        226 DTAAFLASPDSRWVTGQLIDVSG  248 (252)
T ss_pred             HHHHHHcCccccCcCCcEEEecC
Confidence            99999886543  4577787775

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.80  E-value=1.6e-18  Score=153.22  Aligned_cols=211  Identities=12%  Similarity=0.012  Sum_probs=143.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh-------cCCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-------IGGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ...+++||||||+|+||++++++|++.  |++|+++.|+. +.+.       ....+.++++|++|++.+.++++     
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999  99999999983 2221       12347889999999998887776     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||+|.....  .+......+++       ...++|+.+...+.++    +++.+.+++|++||..+..+...
T Consensus        89 ~g~id~li~~ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  159 (258)
T PRK06935         89 FGKIDILVNNAGTIRRA--PLLEYKDEDWN-------AVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF  159 (258)
T ss_pred             cCCCCEEEECCCCCCCC--CcccCCHHHHH-------HHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC
Confidence              689999999964321  11111112222       2337788886655544    44556679999999876443222


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh----hhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE----LLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      .     ..|..+|...+.+.+       ..|+++++|+||++..+......    ........++  ...+...+|+++.
T Consensus       160 ~-----~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~  232 (258)
T PRK06935        160 V-----PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIP--AGRWGEPDDLMGA  232 (258)
T ss_pred             c-----hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCC--CCCCCCHHHHHHH
Confidence            1     359999999887765       35899999999999876422100    0000000111  1346788999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.+..  ..|+++.+.+
T Consensus       233 ~~~l~s~~~~~~~G~~i~~dg  253 (258)
T PRK06935        233 AVFLASRASDYVNGHILAVDG  253 (258)
T ss_pred             HHHHcChhhcCCCCCEEEECC
Confidence            999887543  4677888776

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=2.3e-18  Score=151.93  Aligned_cols=211  Identities=12%  Similarity=0.087  Sum_probs=142.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcC-CCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIG-GADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~-~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      .+++++||||+|+||+++++.|+++  |++|+++.|+.+. .+.+. .++.++.+|++|++++.++++       ++|+|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3588999999999999999999999  9999988775432 33332 247889999999998888775       58999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHH----HHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQ----KNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~----~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||+|.....  .+......++       ....++|+.++    +.+++.+++.+.++||++||..++....+    ...
T Consensus        84 i~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----~~~  150 (255)
T PRK06463         84 VNNAGIMYLM--PFEEFDEEKY-------NKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE----GTT  150 (255)
T ss_pred             EECCCcCCCC--ChhhCCHHHH-------HHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC----Ccc
Confidence            9999974321  1111122222       23348898885    44555566566679999999876432211    124


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC-cc----c-cC-CcccccCHHHHHHHHHHH
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD-DE----L-LQ-TETRTIARADVAEVCIQA  293 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-~~----~-~~-~~~~~i~v~Dva~~~~~~  293 (331)
                      .|..+|...+.+.+       ..++++++++||++..+.....  ..... ..    + .. ....+..++|+|++++.+
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  228 (255)
T PRK06463        151 FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSG--KSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFL  228 (255)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcc--cCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHH
Confidence            59999999887665       3589999999999865532100  00000 00    0 00 012346899999999999


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +..+.  ..|+.+.+.+
T Consensus       229 ~s~~~~~~~G~~~~~dg  245 (255)
T PRK06463        229 ASDDARYITGQVIVADG  245 (255)
T ss_pred             cChhhcCCCCCEEEECC
Confidence            87653  4678888876

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.80  E-value=1.3e-18  Score=151.75  Aligned_cols=203  Identities=16%  Similarity=0.111  Sum_probs=139.7

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh----c---CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK----I---GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      |||||++|+||+++++.|+++  |++|++++|+. +....    +   ..++.++.+|++|++++.++++       .+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999  99999999975 22221    1   2236789999999998888775       469


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +|||++|.....  .+......+++..+       ++|+.++.++++++..    .+.++||++||..+.....+     
T Consensus        79 ~vi~~ag~~~~~--~~~~~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~-----  144 (239)
T TIGR01830        79 ILVNNAGITRDN--LLMRMKEEDWDAVI-------DTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG-----  144 (239)
T ss_pred             EEEECCCCCCCC--ChhhCCHHHHHHHH-------HHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC-----
Confidence            999999974321  01111112233333       7889998888888764    45679999999765433221     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----hhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      ...|..+|...+.+.+       ..++.+++++||.+.++.....     ....+.   .+  ...+.+++|++++++.+
T Consensus       145 ~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~a~~~~~~  219 (239)
T TIGR01830       145 QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQ---IP--LGRFGTPEEVANAVAFL  219 (239)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhc---CC--cCCCcCHHHHHHHHHHH
Confidence            1458899987776554       3589999999999866532110     011111   11  12357899999999988


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +..+.  ..|++|++.+
T Consensus       220 ~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       220 ASDEASYITGQVIHVDG  236 (239)
T ss_pred             hCcccCCcCCCEEEeCC
Confidence            86543  4678999975

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.80  E-value=3.6e-18  Score=150.72  Aligned_cols=211  Identities=15%  Similarity=0.103  Sum_probs=146.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .++++|+||||+|+||++++++|+++  |++|++++|+++..+.+       ..++.++.+|++|++++.++++      
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999  99999999987654332       2347899999999998887765      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+|||++|.....  .+......+++.       ..++|+.++..+++++    ++.+.++||++||..+...... 
T Consensus        87 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-  156 (256)
T PRK06124         87 GRLDILVNNVGARDRR--PLAELDDAAIRA-------LLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG-  156 (256)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC-
Confidence             469999999964321  111111222222       3378888887777555    4467789999999876433221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ...|+.+|...+.+.+       ..+++++.|+||.+.++.....    ..........+  ...+++++|+++++
T Consensus       157 ----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~  230 (256)
T PRK06124        157 ----DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTP--LGRWGRPEEIAGAA  230 (256)
T ss_pred             ----ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCC--CCCCCCHHHHHHHH
Confidence                2469999999877655       2589999999999988752110    00000000011  12468999999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.++.  ..|+.+.+.+
T Consensus       231 ~~l~~~~~~~~~G~~i~~dg  250 (256)
T PRK06124        231 VFLASPAASYVNGHVLAVDG  250 (256)
T ss_pred             HHHcCcccCCcCCCEEEECC
Confidence            99998764  3477777765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.80  E-value=1.8e-18  Score=152.36  Aligned_cols=211  Identities=13%  Similarity=0.051  Sum_probs=144.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-h----hhcCCCCcEEEccCCCcccHHHHhc-------C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-K----QKIGGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~----~~l~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +.++++|||||+++||++++++|+++  |++|++++|+... .    +....++.++.+|++|++++.++++       +
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            44688999999999999999999999  9999999886422 1    1123357789999999999888875       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~~~~~~  222 (331)
                      +|++|||||.....  .+......+++       ..+++|+.+...+.+++.    +.+ -.+||++||..+..+.... 
T Consensus        84 iD~lv~~ag~~~~~--~~~~~~~~~~~-------~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-  153 (251)
T PRK12481         84 IDILINNAGIIRRQ--DLLEFGNKDWD-------DVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV-  153 (251)
T ss_pred             CCEEEECCCcCCCC--CcccCCHHHHH-------HHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC-
Confidence            89999999974321  11122222333       344899988777766653    333 3589999998765433221 


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh----hhccCCccccCCcccccCHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE----LLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                          ..|..+|...+.+.+       .+|++++.++||++-.+......    ........++.  ..+...+|+|++++
T Consensus       154 ----~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--~~~~~peeva~~~~  227 (251)
T PRK12481        154 ----PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA--SRWGTPDDLAGPAI  227 (251)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC--CCCcCHHHHHHHHH
Confidence                359999999887665       46899999999999766321100    00000011121  23578999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++....  ..|+++.+.+
T Consensus       228 ~L~s~~~~~~~G~~i~vdg  246 (251)
T PRK12481        228 FLSSSASDYVTGYTLAVDG  246 (251)
T ss_pred             HHhCccccCcCCceEEECC
Confidence            9987543  4567777765

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.2e-18  Score=153.68  Aligned_cols=213  Identities=15%  Similarity=0.081  Sum_probs=144.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..++++|||||+|+||+++++.|+++  |++|++++|+.++.+.+       ..++.++.+|++|++.+.++++      
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34688999999999999999999999  99999999987655432       2346788999999998887764      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~~~~  220 (331)
                       ++|+||||+|.....  .+......++       ...+++|+.+...+++++.    +.+ -.++|++||..+.....+
T Consensus        85 g~id~lv~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  155 (253)
T PRK05867         85 GGIDIAVCNAGIITVT--PMLDMPLEEF-------QRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP  155 (253)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC
Confidence             689999999974321  1111111112       2334788888877777664    333 247999998765322211


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hhhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IRELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      .   ....|+.+|...+.+.+       ..|++++.++||.+-.+... ............+.  ..+..++|+|++++.
T Consensus       156 ~---~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~r~~~p~~va~~~~~  230 (253)
T PRK05867        156 Q---QVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPL--GRLGRPEELAGLYLY  230 (253)
T ss_pred             C---CccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCC--CCCcCHHHHHHHHHH
Confidence            1   11359999999887765       35899999999999776422 11110000011111  235789999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++....  ..|+++.+.+
T Consensus       231 L~s~~~~~~tG~~i~vdg  248 (253)
T PRK05867        231 LASEASSYMTGSDIVIDG  248 (253)
T ss_pred             HcCcccCCcCCCeEEECC
Confidence            987543  4677888876

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.6e-18  Score=150.81  Aligned_cols=190  Identities=14%  Similarity=0.193  Sum_probs=135.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +++++||||+|+||++++++|+++  |++|++++|++++.+.+         ...+.++.+|++|++++.++++      
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999  99999999987654432         1247889999999988877664      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||+|......  ....       .++......++|+.+...+++++    ++.+.++||++||..+..... .
T Consensus        80 ~~id~vi~~ag~~~~~~--~~~~-------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~  149 (248)
T PRK08251         80 GGLDRVIVNAGIGKGAR--LGTG-------KFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP-G  149 (248)
T ss_pred             CCCCEEEECCCcCCCCC--cCcC-------CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC-C
Confidence             6899999999743211  0011       11112233478888887777765    455778999999976533221 1


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                         ....|+.+|...+.+.+       ..++++++++||++.++....      ..     .....++.+|.|+.++.++
T Consensus       150 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~------~~-----~~~~~~~~~~~a~~i~~~~  215 (248)
T PRK08251        150 ---VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK------AK-----STPFMVDTETGVKALVKAI  215 (248)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc------cc-----cCCccCCHHHHHHHHHHHH
Confidence               11459999998876654       247899999999997764211      10     0122478999999999999


Q ss_pred             cCc
Q 046297          295 QFE  297 (331)
Q Consensus       295 ~~~  297 (331)
                      +.+
T Consensus       216 ~~~  218 (248)
T PRK08251        216 EKE  218 (248)
T ss_pred             hcC
Confidence            764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.80  E-value=4.9e-18  Score=151.38  Aligned_cols=210  Identities=14%  Similarity=0.074  Sum_probs=141.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c---CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I---GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.++++|||||+|+||+++++.|+++  |++|++++|+ ++.++    +   ..++.++.+|++|++++.++++      
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            45688999999999999999999999  9999999998 44332    2   2247889999999988877665      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|++|||||....... +.......+       ...+++|+.+...++++    +++.+ .+||++||..+..+... 
T Consensus        81 g~id~li~~Ag~~~~~~~-~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-  150 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGR-IHEYPVDVF-------DKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLY-  150 (272)
T ss_pred             CCcCEEEECCCCCCCCCC-cccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCC-
Confidence             58999999997432110 111111111       23337788876555544    44455 69999999876443221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh---------hhccC-CccccCCcccccCHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE---------LLVGK-DDELLQTETRTIARA  284 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~---------~~~~~-~~~~~~~~~~~i~v~  284 (331)
                          ...|..+|...+.+.+       ..|++++.++||.+..+......         ..... ....+  ...+.+++
T Consensus       151 ----~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  224 (272)
T PRK08589        151 ----RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP--LGRLGKPE  224 (272)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC--CCCCcCHH
Confidence                1469999999887765       35899999999999776421100         00000 00011  11246899


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEecc
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |+|++++.++.++.  ..|+.+.+.+
T Consensus       225 ~va~~~~~l~s~~~~~~~G~~i~vdg  250 (272)
T PRK08589        225 EVAKLVVFLASDDSSFITGETIRIDG  250 (272)
T ss_pred             HHHHHHHHHcCchhcCcCCCEEEECC
Confidence            99999999887542  4677787775

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.79  E-value=4e-18  Score=152.35  Aligned_cols=219  Identities=17%  Similarity=0.145  Sum_probs=143.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +..++++||||+|+||++++++|+++  |++|++++|+.+..+.+       ..++.++++|+.|++++.++++      
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34678999999999999999999999  99999999987554332       2246788999999988877664      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCC--CCC---C--CccccccCCCcceehHHHHHHH----HHHHHHcCCCeEEEEccCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPA--KGG---R--PEFYFEEGAYPEQVDWIGQKNQ----IDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~--~~~---~--p~~~~~~~~~~~~~nv~~~~~l----l~aa~~~~vk~~v~~SS~~~  214 (331)
                       ++|+||||+|....... .++.  ...   .  .+...++.....++|+.+...+    ++.+++.+.++||++||..+
T Consensus        86 g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277         86 GPCDILINGAGGNHPKAT-TDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             CCCCEEEECCCCCCcccc-cccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence             68999999996432110 0000  000   0  0011111122347788776644    44455556679999999877


Q ss_pred             CCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC-------cccc-CC-cc
Q 046297          215 TNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD-------DELL-QT-ET  278 (331)
Q Consensus       215 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-------~~~~-~~-~~  278 (331)
                      +.+..+.     ..|..+|...+.+.+       ..++++++|+||++.++...  .......       ..+. .. ..
T Consensus       165 ~~~~~~~-----~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~p~~  237 (278)
T PRK08277        165 FTPLTKV-----PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNR--ALLFNEDGSLTERANKILAHTPMG  237 (278)
T ss_pred             cCCCCCC-----chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchh--hhhccccccchhHHHHHhccCCcc
Confidence            5433222     359999999887765       25899999999999887432  1111000       0000 00 12


Q ss_pred             cccCHHHHHHHHHHHhcC-cc--cCCceEEecc
Q 046297          279 RTIARADVAEVCIQALQF-EE--AKFKAFDLAS  308 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~-~~--~~~~~~~i~~  308 (331)
                      .+...+|+|++++.++.. ..  ..|+.+.+.+
T Consensus       238 r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg  270 (278)
T PRK08277        238 RFGKPEELLGTLLWLADEKASSFVTGVVLPVDG  270 (278)
T ss_pred             CCCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence            356889999999998876 33  4577777765

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.1e-18  Score=149.19  Aligned_cols=210  Identities=13%  Similarity=0.081  Sum_probs=142.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hh-------hcCCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQ-------KIGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~-------~l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.++|+||||+|+||+++++.|+++  |++|+++.|+.+. .+       ....++.++.+|++|++++.++++      
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999  9999888876432 11       123357889999999998888876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                       ++|+|||++|.....  .+......++       ..+.++|+.+..++++++.+.  ..++||++||.....+..+   
T Consensus        82 ~~id~vi~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---  149 (245)
T PRK12937         82 GRIDVLVNNAGVMPLG--TIADFDLEDF-------DRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG---  149 (245)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC---
Confidence             689999999974321  1111111112       234478999998988887654  2358999998765433222   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCc--c-hhhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEG--G-IRELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~--~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                        ...|+.+|..++.+++       ..++++++++||++.++..  . ............+  ...+.+++|++++++.+
T Consensus       150 --~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~a~~~~~l  225 (245)
T PRK12937        150 --YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAP--LERLGTPEEIAAAVAFL  225 (245)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCC--CCCCCCHHHHHHHHHHH
Confidence              2459999999887765       2478999999998876531  1 0011000000001  12346889999999999


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +..+.  ..|+.+++.+
T Consensus       226 ~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        226 AGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             cCccccCccccEEEeCC
Confidence            87653  3578888875

>PRK08324 short chain dehydrogenase; Validated

Probab=99.79  E-value=2.1e-18  Score=172.00  Aligned_cols=212  Identities=19%  Similarity=0.174  Sum_probs=148.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CC--CCcEEEccCCCcccHHHHhc-------C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GG--ADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~--~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      .+++||||||+|+||+++++.|+++  |++|++++|+.++.+.+    ..  .+.++.+|++|++.+.++++       +
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999  99999999998665432    22  57789999999998887775       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCC-CeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGA-KQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v-k~~v~~SS~~~~~~~~~~~  222 (331)
                      +|+||||+|......  +...+...++.       .+++|+.+...+++++    ++.+. .+||++||..+..+...  
T Consensus       499 iDvvI~~AG~~~~~~--~~~~~~~~~~~-------~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~--  567 (681)
T PRK08324        499 VDIVVSNAGIAISGP--IEETSDEDWRR-------SFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN--  567 (681)
T ss_pred             CCEEEECCCCCCCCC--hhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC--
Confidence            899999999743311  11112222222       3488999988886665    44454 68999999876543322  


Q ss_pred             CCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCccc-CCCcchhh------hhccCCcc----cc---CCccccc
Q 046297          223 SLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQ-DKEGGIRE------LLVGKDDE----LL---QTETRTI  281 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~-g~~~~~~~------~~~~~~~~----~~---~~~~~~i  281 (331)
                         ...|+.+|...+.+.+.       .++++++++|+.+| +.......      ...+....    ..   .....++
T Consensus       568 ---~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v  644 (681)
T PRK08324        568 ---FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREV  644 (681)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCcc
Confidence               25699999999887652       47999999999997 44311000      00111100    11   1124679


Q ss_pred             CHHHHHHHHHHHhc--CcccCCceEEecc
Q 046297          282 ARADVAEVCIQALQ--FEEAKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~--~~~~~~~~~~i~~  308 (331)
                      +++|+|++++.++.  .....|++|++.+
T Consensus       645 ~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        645 TPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            99999999999884  3345688999987

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.79  E-value=1.7e-18  Score=151.75  Aligned_cols=210  Identities=17%  Similarity=0.111  Sum_probs=136.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      ++|+||||+|+||++++++|+++  |++|+++ .|++++..+.       ...+.++.+|+.|++.+.++++       +
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999  9999874 5665443321       2246789999999998888776       4


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-------CCCeEEEEccCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-------GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-------~vk~~v~~SS~~~~~~~~~  220 (331)
                      +|+|||++|....... .......+++       ...++|+.++..+++++...       .-++||++||..+......
T Consensus        80 id~vi~~ag~~~~~~~-~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~  151 (247)
T PRK09730         80 LAALVNNAGILFTQCT-VENLTAERIN-------RVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG  151 (247)
T ss_pred             CCEEEECCCCCCCCCc-cccCCHHHHH-------HHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC
Confidence            6899999996422110 1111111122       23478888887776655432       1346999999865432211


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ....|..+|...+.+++       +.+++++++|||+++++....   ...........+-  ....+++|+|+++
T Consensus       152 ----~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~  225 (247)
T PRK09730        152 ----EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPM--QRGGQPEEVAQAI  225 (247)
T ss_pred             ----cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCC--CCCcCHHHHHHHH
Confidence                01248899998887654       358999999999999985321   0000000000111  1124789999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++..+.  ..|+.+.+.+
T Consensus       226 ~~~~~~~~~~~~g~~~~~~g  245 (247)
T PRK09730        226 VWLLSDKASYVTGSFIDLAG  245 (247)
T ss_pred             HhhcChhhcCccCcEEecCC
Confidence            99887542  4567777765

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.3e-18  Score=152.56  Aligned_cols=209  Identities=15%  Similarity=0.139  Sum_probs=140.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhc-------CCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQ-------GIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi~  153 (331)
                      ++++|||||+|+||+++++.|+++  |++|++++|+.++.+.+. .++.++.+|+.|++.+.++++       ++|+|||
T Consensus         1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            368999999999999999999999  999999999977655542 347789999999988877764       6899999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      |+|.....  .+.....++++       ...++|+.++..+++++..   .+.+++|++||..+......     ...|.
T Consensus        79 ~ag~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~~Y~  144 (274)
T PRK05693         79 NAGYGAMG--PLLDGGVEAMR-------RQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF-----AGAYC  144 (274)
T ss_pred             CCCCCCCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC-----ccHHH
Confidence            99964321  11111122222       3348899998887777632   24468999999776433221     24699


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----hhhccCCcccc----------CCcccccCHHHHHH
Q 046297          231 VWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDELL----------QTETRTIARADVAE  288 (331)
Q Consensus       231 ~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~~----------~~~~~~i~v~Dva~  288 (331)
                      .+|...+.+.+       ..|+++++++||.+.++.....     ..........+          .........+|+|+
T Consensus       145 ~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  224 (274)
T PRK05693        145 ASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFAR  224 (274)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHH
Confidence            99998877653       3689999999999977642210     00000000000          00112467899999


Q ss_pred             HHHHHhcCcccCCceEEec
Q 046297          289 VCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~  307 (331)
                      .++.+++.+... ..+.++
T Consensus       225 ~i~~~~~~~~~~-~~~~~g  242 (274)
T PRK05693        225 QLLAAVQQSPRP-RLVRLG  242 (274)
T ss_pred             HHHHHHhCCCCC-ceEEec
Confidence            999999865432 234444

>PRK12742 oxidoreductase; Provisional

Probab=99.79  E-value=3.4e-18  Score=149.06  Aligned_cols=209  Identities=12%  Similarity=0.160  Sum_probs=141.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-CchhhhcCC--CCcEEEccCCCcccHHHHhc---CCCEEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQKIGG--ADDLFIGDIRDSNSIIPAIQ---GIDALII  153 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~  153 (331)
                      +.+++||||||+|+||+++++.|+++  |++|+++.|+ ++..+++..  +..++.+|++|.+.+.+.++   ++|+|||
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   81 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVV   81 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEE
Confidence            44688999999999999999999999  9999887764 343333321  36788999999888877775   4899999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHH
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILV  231 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~  231 (331)
                      |+|......  ....+..++       ....++|+.+...++..+...  ..+++|++||..+...  +...  ...|..
T Consensus        82 ~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--~~~~--~~~Y~~  148 (237)
T PRK12742         82 NAGIAVFGD--ALELDADDI-------DRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM--PVAG--MAAYAA  148 (237)
T ss_pred             CCCCCCCCC--cccCCHHHH-------HHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC--CCCC--CcchHH
Confidence            999643211  001111222       333488999988887665543  3468999999765221  1111  245999


Q ss_pred             HHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--
Q 046297          232 WKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--  298 (331)
Q Consensus       232 sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--  298 (331)
                      +|...+.+.+       ..++++++|+||.+..+....    ......   ..+  ...+.+.+|+++++..++.+..  
T Consensus       149 sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~---~~~--~~~~~~p~~~a~~~~~l~s~~~~~  223 (237)
T PRK12742        149 SKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHS---FMA--IKRHGRPEEVAGMVAWLAGPEASF  223 (237)
T ss_pred             hHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHh---cCC--CCCCCCHHHHHHHHHHHcCcccCc
Confidence            9999887665       358999999999997764211    000000   001  1235789999999999887643  


Q ss_pred             cCCceEEecc
Q 046297          299 AKFKAFDLAS  308 (331)
Q Consensus       299 ~~~~~~~i~~  308 (331)
                      ..|+.+.+.+
T Consensus       224 ~~G~~~~~dg  233 (237)
T PRK12742        224 VTGAMHTIDG  233 (237)
T ss_pred             ccCCEEEeCC
Confidence            3677777765

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4e-18  Score=150.06  Aligned_cols=212  Identities=18%  Similarity=0.131  Sum_probs=144.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++|+||||+|+||++++++|+++  |++|++++|+.++.+.+       .....++++|+.|.+++.++++      
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            44678999999999999999999999  99999999987654332       2236788999999988877664      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       .+|+|||++|......+ .......++       ....++|+.+...+++++    ++.+.+++|++||..+..+..+.
T Consensus        84 ~~id~li~~ag~~~~~~~-~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  155 (252)
T PRK07035         84 GRLDILVNNAAANPYFGH-ILDTDLGAF-------QKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQ  155 (252)
T ss_pred             CCCCEEEECCCcCCCCCC-cccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCC
Confidence             58999999986432111 001111111       233478888877666555    55567899999998664433222


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                           ..|+.+|..++.+.+       ..|++++.+.||.+..+.....    ..........+  ...+..++|+|+.+
T Consensus       156 -----~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~  228 (252)
T PRK07035        156 -----GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP--LRRHAEPSEMAGAV  228 (252)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC--CCCcCCHHHHHHHH
Confidence                 459999999987765       2589999999999976542110    00000000011  12356789999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.+..  ..|+++.+.+
T Consensus       229 ~~l~~~~~~~~~g~~~~~dg  248 (252)
T PRK07035        229 LYLASDASSYTTGECLNVDG  248 (252)
T ss_pred             HHHhCccccCccCCEEEeCC
Confidence            99887653  4677777765

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.4e-18  Score=150.25  Aligned_cols=211  Identities=17%  Similarity=0.111  Sum_probs=144.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++|+||||+|+||+++++.|+++  |++|+++.|++++.+.+       ..++.++.+|+.+++++.++++      
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            45689999999999999999999999  99999999987665432       2347789999999998888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC--------CCeEEEEccCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG--------AKQIVLVGSMG  213 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~--------vk~~v~~SS~~  213 (331)
                       ++|+||||+|.....  .+.+....+++       .+.++|+.+...+++++.    +..        ..++|++||..
T Consensus        85 ~~~d~li~~ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  155 (258)
T PRK06949         85 GTIDILVNNSGVSTTQ--KLVDVTPADFD-------FVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVA  155 (258)
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHHH-------HHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccc
Confidence             589999999964321  11111112222       334788888887777654    222        25899999987


Q ss_pred             CCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---hhhccCCccccCCcccccCH
Q 046297          214 GTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---ELLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       214 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~i~v  283 (331)
                      +.....+     ...|..+|...+.+.+       ..++++++++||+++++.....   .........++  ...+...
T Consensus       156 ~~~~~~~-----~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~p  228 (258)
T PRK06949        156 GLRVLPQ-----IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLP--RKRVGKP  228 (258)
T ss_pred             ccCCCCC-----ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCC--CCCCcCH
Confidence            6543222     2469999998877665       2589999999999998753211   00000000111  1235678


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+++.+..++....  ..|+.+.+.+
T Consensus       229 ~~~~~~~~~l~~~~~~~~~G~~i~~dg  255 (258)
T PRK06949        229 EDLDGLLLLLAADESQFINGAIISADD  255 (258)
T ss_pred             HHHHHHHHHHhChhhcCCCCcEEEeCC
Confidence            999999999887543  4566666654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.78  E-value=8.7e-18  Score=148.62  Aligned_cols=210  Identities=17%  Similarity=0.076  Sum_probs=138.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C--CCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G--GADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~--~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      |+||||||+|+||++++++|+++  |++|++++|++++.++.    .  .++.++++|++|++++.++++       ++|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999  99999999987654332    1  247789999999998887774       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHH----HHHHHHH-HcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQK----NQIDAAK-AAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~----~ll~aa~-~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      +||||+|........+.+....++..       ..++|+.+..    .++..+. +.+-++||++||..+..+..+.   
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~---  148 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLE-------AALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPL---  148 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHH-------HHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCc---
Confidence            99999996432111111111111211       2255655543    3444443 3345689999998765433221   


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhc--cC----------CccccCCcccccCH
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLV--GK----------DDELLQTETRTIAR  283 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~--~~----------~~~~~~~~~~~i~v  283 (331)
                        ..|..+|...+.+.+       ..|++++.|.||++-.+...  ......  +.          ....+.  ..+..+
T Consensus       149 --~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~r~~~p  224 (259)
T PRK08340        149 --VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPL--KRTGRW  224 (259)
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCc--cCCCCH
Confidence              458899999887765       35799999999999776431  110000  00          001111  235688


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+|++++.++..+.  ..|++..+.+
T Consensus       225 ~dva~~~~fL~s~~~~~itG~~i~vdg  251 (259)
T PRK08340        225 EELGSLIAFLLSENAEYMLGSTIVFDG  251 (259)
T ss_pred             HHHHHHHHHHcCcccccccCceEeecC
Confidence            999999999987643  4677777766

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.78  E-value=6.8e-18  Score=148.03  Aligned_cols=210  Identities=15%  Similarity=0.130  Sum_probs=138.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchh----hhc---CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESK----QKI---GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~----~~l---~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ++++++||||+|+||++++++|+++  |++|++..+ +..+.    +++   ...+..+.+|+.|.+++.++++      
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999  999888554 32222    111   2235677899999988877764      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHH----HHHHHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ----IDAAKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~l----l~aa~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||+|.....  .+......++       ....++|+.+...+    ++.+++.+.++||++||..+...... 
T Consensus        80 ~~id~li~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  149 (246)
T PRK12938         80 GEIDVLVNNAGITRDV--VFRKMTREDW-------TAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG-  149 (246)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC-
Confidence             589999999974321  1111112222       23347888885554    44455667789999999865432221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                          ...|..+|...+.+.+       ..+++++.++||++.++....  ...........  ....+...+|++++++.
T Consensus       150 ----~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~  223 (246)
T PRK12938        150 ----QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI--PVRRLGSPDEIGSIVAW  223 (246)
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcC--CccCCcCHHHHHHHHHH
Confidence                2458999998776554       358999999999998875321  00000000000  11235688999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.  ..|+.+.+.+
T Consensus       224 l~~~~~~~~~g~~~~~~~  241 (246)
T PRK12938        224 LASEESGFSTGADFSLNG  241 (246)
T ss_pred             HcCcccCCccCcEEEECC
Confidence            886642  4677888775

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.6e-18  Score=149.75  Aligned_cols=211  Identities=12%  Similarity=0.039  Sum_probs=144.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+++|+||||+|+||++++++|+++  |++|++++|++++.+.+       ..++.++.+|+.|.+++.++++       
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999  99999999987654322       2347889999999998887765       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||+|...... .+.+...++++.       ..++|+.+...+++    .+++.+.+++|++||..+..+...  
T Consensus        84 ~id~li~~ag~~~~~~-~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--  153 (253)
T PRK06172         84 RLDYAFNNAGIEIEQG-RLAEGSEAEFDA-------IMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK--  153 (253)
T ss_pred             CCCEEEECCCCCCCCC-ChhhCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC--
Confidence            4699999999643211 111222222233       33788888765554    444556678999999876543322  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcc---c--cCCcccccCHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDE---L--LQTETRTIARADVAEVC  290 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~---~--~~~~~~~i~v~Dva~~~  290 (331)
                         ...|..+|...+.+.+       ..++++++++||.+-.+....  ........   +  .........++|+++.+
T Consensus       154 ---~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~  228 (253)
T PRK06172        154 ---MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRR--AYEADPRKAEFAAAMHPVGRIGKVEEVASAV  228 (253)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhh--hcccChHHHHHHhccCCCCCccCHHHHHHHH
Confidence               2459999999887765       257999999999997664211  10000000   0  00012346899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.+..  ..|+.+.+.+
T Consensus       229 ~~l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        229 LYLCSDGASFTTGHALMVDG  248 (253)
T ss_pred             HHHhCccccCcCCcEEEECC
Confidence            99987642  4678888876

>PRK09242 tropinone reductase; Provisional

Probab=99.78  E-value=6.7e-18  Score=149.13  Aligned_cols=211  Identities=11%  Similarity=0.017  Sum_probs=144.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ..+++++||||+|+||+++++.|+++  |++|++++|+.+..+++         ...+.++.+|+.|++++.++++    
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGL--GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            44688999999999999999999999  99999999987654432         1246788999999988776664    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+|||++|.....  .......+++       ....++|+.+...+++++.    +.+.++||++||..+..+..
T Consensus        85 ~~g~id~li~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~  155 (257)
T PRK09242         85 HWDGLHILVNNAGGNIRK--AAIDYTEDEW-------RGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVR  155 (257)
T ss_pred             HcCCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCC
Confidence               589999999963211  0111112222       2334889998888877663    45667999999987654433


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      +.     ..|..+|...+.+.+       ..+++++.++||++.++....    ...........+  ...+...+|++.
T Consensus       156 ~~-----~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~  228 (257)
T PRK09242        156 SG-----APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTP--MRRVGEPEEVAA  228 (257)
T ss_pred             CC-----cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCC--CCCCcCHHHHHH
Confidence            22     458899999887665       358999999999998875321    000000000001  122457899999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++..++....  ..|+.+.+.+
T Consensus       229 ~~~~l~~~~~~~~~g~~i~~~g  250 (257)
T PRK09242        229 AVAFLCMPAASYITGQCIAVDG  250 (257)
T ss_pred             HHHHHhCcccccccCCEEEECC
Confidence            9999886542  3577777765

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-17  Score=147.40  Aligned_cols=211  Identities=15%  Similarity=0.051  Sum_probs=138.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc----hhhh----c---CCCCcEEEccCCCcccHHHHhc---
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE----SKQK----I---GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~----~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      .+++++||||+|+||+++++.|+++  |++|+++.++.+    ..+.    +   ..++.++++|++|++++.++++   
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            4578999999999999999999999  999877765432    1111    1   2347789999999999887765   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEE-ccCCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLV-GSMGGTNLNH  219 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~-SS~~~~~~~~  219 (331)
                          ++|+||||||.....  .+....       .++....+++|+.++..+++++...  ...+++++ ||..+.. . 
T Consensus        85 ~~~~~id~li~~ag~~~~~--~~~~~~-------~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~-~-  153 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLKK--PIVEIS-------EAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF-T-  153 (257)
T ss_pred             HhhCCCCEEEECCcccCCC--CcccCC-------HHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-C-
Confidence                589999999964321  111111       1222344588999998888887643  12456665 4443211 1 


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcch---hhh-hc-cCCc-cccCCcccccCHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGI---REL-LV-GKDD-ELLQTETRTIARADV  286 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~---~~~-~~-~~~~-~~~~~~~~~i~v~Dv  286 (331)
                      +    ....|+.+|...|.+.+.       .++++++++||++.++....   ... .. .... ..+-....+.+++|+
T Consensus       154 ~----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (257)
T PRK12744        154 P----FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDI  229 (257)
T ss_pred             C----CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHH
Confidence            1    114599999999887762       47999999999997763210   000 00 0000 001111246789999


Q ss_pred             HHHHHHHhcCcc-cCCceEEecc
Q 046297          287 AEVCIQALQFEE-AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~-~~~~~~~i~~  308 (331)
                      |+++..++.... ..|+++++.+
T Consensus       230 a~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        230 VPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             HHHHHHhhcccceeecceEeecC
Confidence            999999998543 2578898886

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.78  E-value=7.6e-18  Score=149.46  Aligned_cols=211  Identities=13%  Similarity=0.032  Sum_probs=140.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-----CCCcEEEccCCCcccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-----GADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-----~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ..+++++||||+|+||+++++.|+++  |++|++++|++++.+..    .     ..+.++.+|++|++++.++++    
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            44688999999999999999999999  99999999987654432    1     136688999999998877664    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHH----HHHHHHHHcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQK----NQIDAAKAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+||||||.....  .+......+++.       ..++|+.+..    .+++.+++.+..+||++||..+..+..
T Consensus        84 ~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  154 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVS--TFADTTDDAWRD-------ELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP  154 (265)
T ss_pred             hcCCCCEEEECCCCCCCC--ChhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC
Confidence               589999999974321  111111112222       2366766644    444555556667999999987644322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC--------------ccccCCcc
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD--------------DELLQTET  278 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~--------------~~~~~~~~  278 (331)
                      ..     ..|..+|...+.+.+       +.|++++.++||++..+............              ..++  ..
T Consensus       155 ~~-----~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~  227 (265)
T PRK07062        155 HM-----VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP--LG  227 (265)
T ss_pred             Cc-----hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC--cC
Confidence            11     358888888766554       36899999999999776421000000000              0011  11


Q ss_pred             cccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          279 RTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .+...+|+|++++.++.+..  ..|+++.+.+
T Consensus       228 r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg  259 (265)
T PRK07062        228 RLGRPDEAARALFFLASPLSSYTTGSHIDVSG  259 (265)
T ss_pred             CCCCHHHHHHHHHHHhCchhcccccceEEEcC
Confidence            35688999999999887532  4677888775

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.1e-18  Score=154.49  Aligned_cols=199  Identities=17%  Similarity=0.124  Sum_probs=138.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+++|+||||+|+||++++++|+++  |++|++++|++++++++       ...+.++.+|++|++++.++++       
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARR--GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999  99999999998765432       2346688999999999888773       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|++|||||.....  .+.....+++       ....++|+.++.++.+++    ++.+..+||++||..+......  
T Consensus        84 ~iD~lVnnAG~~~~~--~~~~~~~e~~-------~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~--  152 (330)
T PRK06139         84 RIDVWVNNVGVGAVG--RFEETPIEAH-------EQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY--  152 (330)
T ss_pred             CCCEEEECCCcCCCC--CcccCCHHHH-------HHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC--
Confidence            689999999964321  1111111222       233488988877766554    5555678999999876433221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------h-cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          223 SLGNGNILVWKRKAEQYLA-------D-SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~-~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                         ...|..+|...+.+.+       + .+++++.+.||++.++.........+..   ........+++|+|++++.++
T Consensus       153 ---~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~---~~~~~~~~~pe~vA~~il~~~  226 (330)
T PRK06139        153 ---AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRR---LTPPPPVYDPRRVAKAVVRLA  226 (330)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccccc---ccCCCCCCCHHHHHHHHHHHH
Confidence               1469999998665443       2 3799999999999887532111111110   111233578999999999999


Q ss_pred             cCcc
Q 046297          295 QFEE  298 (331)
Q Consensus       295 ~~~~  298 (331)
                      +.+.
T Consensus       227 ~~~~  230 (330)
T PRK06139        227 DRPR  230 (330)
T ss_pred             hCCC
Confidence            8764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-17  Score=148.07  Aligned_cols=213  Identities=13%  Similarity=0.030  Sum_probs=145.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++++||||+|+||++++++|+++  |++|+++.|++++.+++       ..++.++++|++|++++.++++      
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            34678999999999999999999999  99999999987654332       2247789999999998888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||+|.....  .+......++       ....++|+.+...+++++    ++.+.++||++||..+.....+ 
T Consensus        86 ~~id~li~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  155 (265)
T PRK07097         86 GVIDILVNNAGIIKRI--PMLEMSAEDF-------RQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET-  155 (265)
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHH-------HHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC-
Confidence             489999999975431  1111112222       333378888876655554    4556779999999764332221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh--hccCCcccc-----C-CcccccCHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL--LVGKDDELL-----Q-TETRTIARADV  286 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~--~~~~~~~~~-----~-~~~~~i~v~Dv  286 (331)
                          ...|+.+|...+.+.+       ..+++++.|+||++.++.......  ..+......     . ....+...+|+
T Consensus       156 ----~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  231 (265)
T PRK07097        156 ----VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDL  231 (265)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHH
Confidence                1459999999887765       358999999999998875321110  000000000     0 01235678999


Q ss_pred             HHHHHHHhcCc--ccCCceEEecc
Q 046297          287 AEVCIQALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~--~~~~~~~~i~~  308 (331)
                      |+.++.++...  ...|+.+.+.+
T Consensus       232 a~~~~~l~~~~~~~~~g~~~~~~g  255 (265)
T PRK07097        232 AGPAVFLASDASNFVNGHILYVDG  255 (265)
T ss_pred             HHHHHHHhCcccCCCCCCEEEECC
Confidence            99999999764  24677777776

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=1.1e-17  Score=146.96  Aligned_cols=218  Identities=12%  Similarity=0.086  Sum_probs=140.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ..+++|||||+|+||+++++.|+++  |++|++++|++++.+..       ..++.++++|++|++.+.++++       
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999  99999999987654332       2346789999999888776664       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHc-CCCeEEEEccCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAA-GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~-~vk~~v~~SS~~~~~~~~~~  221 (331)
                      ++|+|||++|..........+..........+......++|+.+...+.+++    .+. .-.+||++||...+ ...  
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-~~~--  158 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-GNM--  158 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-CCC--
Confidence            4799999999643210000000000011111111223367888876655443    333 23478998887542 211  


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                         ....|..+|...+.+.+       ..+++++.++||++.++.....  ..........+  ...+.+++|+|+++..
T Consensus       159 ---~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~  233 (253)
T PRK08217        159 ---GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIP--VGRLGEPEEIAHTVRF  233 (253)
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCC--cCCCcCHHHHHHHHHH
Confidence               12459999998887654       3689999999999987643210  00000000011  1235689999999999


Q ss_pred             HhcCcccCCceEEecc
Q 046297          293 ALQFEEAKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~~~~~~~~i~~  308 (331)
                      ++......|++|++.+
T Consensus       234 l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        234 IIENDYVTGRVLEIDG  249 (253)
T ss_pred             HHcCCCcCCcEEEeCC
Confidence            9976556788999987

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.78  E-value=1.9e-17  Score=144.38  Aligned_cols=209  Identities=14%  Similarity=0.045  Sum_probs=138.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh-hc-CCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-KI-GGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-~l-~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      .+++|||||+|+||++++++|+++  |++|++++|++++.. .+ ..++.++.+|+.|++++.++++       ++|++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence            468999999999999999999999  999999999875422 22 1236789999999988877664       489999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC--CCeEEEEccCCCCCCCCCCCCCCc
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG--AKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~--vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      ||+|......  ......+++       ...+++|+.+...+.+++    ++.+  ..++|++||..+......     .
T Consensus        80 ~~ag~~~~~~--~~~~~~~~~-------~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~-----~  145 (236)
T PRK06483         80 HNASDWLAEK--PGAPLADVL-------ARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK-----H  145 (236)
T ss_pred             ECCccccCCC--cCccCHHHH-------HHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC-----C
Confidence            9999643211  001111122       334478888876555544    3433  458999998765322211     1


Q ss_pred             chHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccC
Q 046297          227 GNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAK  300 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~  300 (331)
                      ..|+.+|...+.+.+.      .++++++|+||++..+...............+-  ..+...+|+++++..++...-..
T Consensus       146 ~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~va~~~~~l~~~~~~~  223 (236)
T PRK06483        146 IAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALAKSLL--KIEPGEEEIIDLVDYLLTSCYVT  223 (236)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhccCcc--ccCCCHHHHHHHHHHHhcCCCcC
Confidence            4599999999987762      358999999999854321111100000000110  11357899999999999755466


Q ss_pred             CceEEecc
Q 046297          301 FKAFDLAS  308 (331)
Q Consensus       301 ~~~~~i~~  308 (331)
                      |+++.+.+
T Consensus       224 G~~i~vdg  231 (236)
T PRK06483        224 GRSLPVDG  231 (236)
T ss_pred             CcEEEeCc
Confidence            78888876

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.6e-18  Score=148.76  Aligned_cols=209  Identities=15%  Similarity=0.071  Sum_probs=142.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +++++||||+|+||+++++.|+++  |++|++++|+.++.+++       ...+.++++|++|++.+.++++       +
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            367999999999999999999999  99999999987654432       2347789999999998887664       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CCeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk~~v~~SS~~~~~~~~~~~  222 (331)
                      +|+||||+|.....  .+.+.+..+++..       +++|+.+..++++++.+    .+ -.+||++||..+..+.... 
T Consensus        79 id~lI~~ag~~~~~--~~~~~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-  148 (252)
T PRK07677         79 IDALINNAAGNFIC--PAEDLSVNGWNSV-------IDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGV-  148 (252)
T ss_pred             ccEEEECCCCCCCC--CcccCCHHHHHHH-------HhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCC-
Confidence            79999999853211  1112222223333       48899999888888743    22 3589999998764432211 


Q ss_pred             CCCcchHHHHHHHHHHHHH--------hcCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA--------DSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~--------~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                          ..|+.+|...+.+.+        ++|++++.++||.+.+.....     ...........+  ...+...+|++++
T Consensus       149 ----~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~  222 (252)
T PRK07677        149 ----IHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP--LGRLGTPEEIAGL  222 (252)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC--CCCCCCHHHHHHH
Confidence                358899988776655        258999999999998532110     000000000111  1235788999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +..++....  ..|+.+.+.+
T Consensus       223 ~~~l~~~~~~~~~g~~~~~~g  243 (252)
T PRK07677        223 AYFLLSDEAAYINGTCITMDG  243 (252)
T ss_pred             HHHHcCccccccCCCEEEECC
Confidence            988876542  4677777765

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.5e-18  Score=152.43  Aligned_cols=202  Identities=15%  Similarity=0.122  Sum_probs=138.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CC--CCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GG--ADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~--~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ..+++||||||+|+||.++++.|+++  |++|++++|++++.+.+    ..  .+..+.+|++|.+++.++++       
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45688999999999999999999999  99999999988765443    22  24456699999998877764       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      ++|+||||+|.....  .+.....+++       ....++|+.+...+++++...   +..+||++||..+......   
T Consensus        85 ~id~vI~nAG~~~~~--~~~~~~~~~~-------~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  152 (296)
T PRK05872         85 GIDVVVANAGIASGG--SVAQVDPDAF-------RRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG---  152 (296)
T ss_pred             CCCEEEECCCcCCCc--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC---
Confidence            589999999974321  1111111222       233488999988888776432   2358999999876543322   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                        ...|+.+|...+.+.+       ..++.+++++||++..+.....    .........++.....+++.+|++++++.
T Consensus       153 --~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~  230 (296)
T PRK05872        153 --MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVD  230 (296)
T ss_pred             --chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHH
Confidence              1469999999887765       3689999999999876532110    00000000011111245789999999999


Q ss_pred             HhcCc
Q 046297          293 ALQFE  297 (331)
Q Consensus       293 ~l~~~  297 (331)
                      ++...
T Consensus       231 ~~~~~  235 (296)
T PRK05872        231 GIERR  235 (296)
T ss_pred             HHhcC
Confidence            98765

>PRK07069 short chain dehydrogenase; Validated

Probab=99.77  E-value=4.8e-18  Score=149.29  Aligned_cols=207  Identities=12%  Similarity=0.071  Sum_probs=138.8

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-CchhhhcC----C-----CCcEEEccCCCcccHHHHhc-------
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQKIG----G-----ADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~l~----~-----~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +|+||||+|+||+++++.|+++  |++|++++|+ .++.+++.    .     .+.++++|++|++.+.++++       
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG   78 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999  9999999998 44333221    1     13457899999998877664       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHH----HHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWI----GQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~----~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||+|......  +....       .++.....++|+.    +++.+++++++.+.++||++||..+....... 
T Consensus        79 ~id~vi~~ag~~~~~~--~~~~~-------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~-  148 (251)
T PRK07069         79 GLSVLVNNAGVGSFGA--IEQIE-------LDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY-  148 (251)
T ss_pred             CccEEEECCCcCCCCC--hhhCC-------HHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC-
Confidence            5899999998643210  10111       1111233367776    67888888888888899999998765433222 


Q ss_pred             CCCcchHHHHHHHHHHHHHh-------c--CCCEEEEecCcccCCCcchhhhhccCC-------ccccCCcccccCHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLAD-------S--GIPYTIIRAGGLQDKEGGIRELLVGKD-------DELLQTETRTIARADV  286 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~~-------~--~~~~~ilrp~~v~g~~~~~~~~~~~~~-------~~~~~~~~~~i~v~Dv  286 (331)
                          ..|+.+|...+.+.+.       .  +++++.++||++.++............       ..++  ...+.+++|+
T Consensus       149 ----~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v  222 (251)
T PRK07069        149 ----TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP--LGRLGEPDDV  222 (251)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC--CCCCcCHHHH
Confidence                3589999988876652       2  488899999999887532110000000       0111  1234689999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++++.++..+.  ..|+.+.+.+
T Consensus       223 a~~~~~l~~~~~~~~~g~~i~~~~  246 (251)
T PRK07069        223 AHAVLYLASDESRFVTGAELVIDG  246 (251)
T ss_pred             HHHHHHHcCccccCccCCEEEECC
Confidence            999999876543  3556666654

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.8e-18  Score=149.42  Aligned_cols=210  Identities=15%  Similarity=0.131  Sum_probs=136.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhhc----CCCCcEEEccCCCcccHHHHhcCC---------
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQKI----GGADDLFIGDIRDSNSIIPAIQGI---------  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~~~---------  148 (331)
                      ++|+||||+|+||++++++|+++  |++|++++|++ +....+    ..+++++++|++|++++.++++.+         
T Consensus         2 k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEK--GTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            67999999999999999999999  99999999986 333322    235788999999999988877522         


Q ss_pred             --CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHc-CCCeEEEEccCCCCCCCCCC
Q 046297          149 --DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAA-GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       149 --d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~-~vk~~v~~SS~~~~~~~~~~  221 (331)
                        +++||++|...... .+......++.       ...++|+.+...++    +.+++. +.++||++||..+..+..+ 
T Consensus        80 ~~~~~v~~ag~~~~~~-~~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  150 (251)
T PRK06924         80 SSIHLINNAGMVAPIK-PIEKAESEELI-------TNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFG-  150 (251)
T ss_pred             CceEEEEcceecccCc-ccccCCHHHHH-------HHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCC-
Confidence              27899998643321 11111122222       23377777754444    444443 3468999999876433222 


Q ss_pred             CCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchhhhhccCCc----ccc--CCcccccCHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIRELLVGKDD----ELL--QTETRTIARADV  286 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~----~~~--~~~~~~i~v~Dv  286 (331)
                          ...|+.+|...+.+.+         ..+++++.|+||++..+.............    ...  .....+.+++|+
T Consensus       151 ----~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  226 (251)
T PRK06924        151 ----WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYV  226 (251)
T ss_pred             ----cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHH
Confidence                2469999999887764         247889999999887654221100000000    000  001236899999


Q ss_pred             HHHHHHHhcCc-ccCCceEEec
Q 046297          287 AEVCIQALQFE-EAKFKAFDLA  307 (331)
Q Consensus       287 a~~~~~~l~~~-~~~~~~~~i~  307 (331)
                      |+.++.++.++ ...|+.+.+.
T Consensus       227 a~~~~~l~~~~~~~~G~~~~v~  248 (251)
T PRK06924        227 AKALRNLLETEDFPNGEVIDID  248 (251)
T ss_pred             HHHHHHHHhcccCCCCCEeehh
Confidence            99999999873 3456666554

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=2.9e-17  Score=148.83  Aligned_cols=228  Identities=13%  Similarity=0.053  Sum_probs=151.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhh----c---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQK----I---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .++++++||||+|+||++++++|+++  |++|++.+|+.. ..+.    +   ..++.++.+|++|++.+.++++     
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            45688999999999999999999999  999999987532 2222    2   2347789999999988887764     


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--------C---CCeEEEEccCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--------G---AKQIVLVGSMGG  214 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--------~---vk~~v~~SS~~~  214 (331)
                       ++|+||||||.....  .+......+++..       .++|+.++..+++++..+        +   -.+||++||..+
T Consensus        88 g~iD~li~nAG~~~~~--~~~~~~~~~~~~~-------~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         88 GGLDIVVNNAGITRDR--MLFNMSDEEWDAV-------IAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHHHHH-------HHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence             589999999975431  1111222223333       388999998888876421        1   248999999865


Q ss_pred             CCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHH
Q 046297          215 TNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       215 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      ......     ...|+.+|..++.+.+       .+|+++++|.|+. .....  ....... .........+.+++|++
T Consensus       159 ~~~~~~-----~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~--~~~~~~~-~~~~~~~~~~~~pe~va  229 (306)
T PRK07792        159 LVGPVG-----QANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMT--ADVFGDA-PDVEAGGIDPLSPEHVV  229 (306)
T ss_pred             ccCCCC-----CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchh--hhhcccc-chhhhhccCCCCHHHHH
Confidence            432221     2359999999887654       3689999999983 22211  1111110 10101223456899999


Q ss_pred             HHHHHHhcCcc--cCCceEEeccC---------------CCCCCCCHHHHHHHHHHh
Q 046297          288 EVCIQALQFEE--AKFKAFDLASK---------------PEGTGTPTKDFKALFSQI  327 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~~---------------~~~~~~t~~e~~~~~~~~  327 (331)
                      .++..++....  ..|++|.+.++               ..+.+++.+|+.+.+.++
T Consensus       230 ~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (306)
T PRK07792        230 PLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDY  286 (306)
T ss_pred             HHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHH
Confidence            99988886532  45666665431               112568999999998887

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=2.2e-17  Score=145.78  Aligned_cols=207  Identities=14%  Similarity=0.046  Sum_probs=141.8

Q ss_pred             CCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCc-----------hh----hh---cCCCCcEEEccCCCccc
Q 046297           81 AKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEE-----------SK----QK---IGGADDLFIGDIRDSNS  140 (331)
Q Consensus        81 ~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~-----------~~----~~---l~~~~~~v~~Dl~d~~~  140 (331)
                      .+++||||||+|  +||.++++.|+++  |++|++++|++.           ..    ..   ....+.++.+|++|+++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            357899999995  7999999999999  999999998721           11    11   12347899999999988


Q ss_pred             HHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----CCCeEEEE
Q 046297          141 IIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----GAKQIVLV  209 (331)
Q Consensus       141 ~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~vk~~v~~  209 (331)
                      +..+++       ++|+|||++|.....  .+......+++       ..+++|+.++..+++++...    +.++||++
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  152 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHT--RLEELTAEQLD-------KHYAVNVRATMLLSSAFAKQYDGKAGGRIINL  152 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEE
Confidence            877664       479999999864321  11111122222       33488999999998887543    44689999


Q ss_pred             ccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccCCccccCCcccc
Q 046297          210 GSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGKDDELLQTETRT  280 (331)
Q Consensus       210 SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~  280 (331)
                      ||..++.+...     ...|..+|..++.+++       ..+++++.++||.+..+...  .......   ..+.  ..+
T Consensus       153 ss~~~~~~~~~-----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~---~~~~--~~~  222 (256)
T PRK12748        153 TSGQSLGPMPD-----ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVP---KFPQ--GRV  222 (256)
T ss_pred             CCccccCCCCC-----chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhc---cCCC--CCC
Confidence            99865433221     2469999999998765       25899999999998766422  1111111   1111  224


Q ss_pred             cCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          281 IARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ...+|+++.+..++....  ..|+++++.+
T Consensus       223 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        223 GEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             cCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence            568999999998887643  4578888875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=1.4e-17  Score=145.09  Aligned_cols=209  Identities=13%  Similarity=0.072  Sum_probs=141.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCc-ccHHHHhcCCCEEEEcccCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDS-NSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~-~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      .+++++||||+|+||++++++|+++  |++|++++|++...  ...++.++.+|+.++ +.+.+.+.++|+||||+|...
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~   79 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPD--LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD   79 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCcccc--cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence            3578999999999999999999999  99999999986432  234578899999987 444444567999999998643


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRK  235 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~  235 (331)
                      ... .+......+++       ...++|+.++.++++++.    +.+.++||++||..+..+...     ...|..+|..
T Consensus        80 ~~~-~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~~~Y~~sK~a  146 (235)
T PRK06550         80 DYK-PLLDTSLEEWQ-------HIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG-----GAAYTASKHA  146 (235)
T ss_pred             CCC-CcccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC-----CcccHHHHHH
Confidence            211 11111122222       334889999888887764    344568999999876433221     1358899998


Q ss_pred             HHHHHH-------hcCCCEEEEecCcccCCCcch--h-hhhc-cCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCc
Q 046297          236 AEQYLA-------DSGIPYTIIRAGGLQDKEGGI--R-ELLV-GKDDELLQTETRTIARADVAEVCIQALQFEE--AKFK  302 (331)
Q Consensus       236 ~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~-~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~  302 (331)
                      .+.+.+       ..++++++++||++.++....  . .... ......+  ...+...+|+|++++.++.+..  ..|+
T Consensus       147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~l~s~~~~~~~g~  224 (235)
T PRK06550        147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP--IKRWAEPEEVAELTLFLASGKADYMQGT  224 (235)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC--cCCCCCHHHHHHHHHHHcChhhccCCCc
Confidence            776654       258999999999998764321  0 0000 0000011  1235788999999999986542  4567


Q ss_pred             eEEecc
Q 046297          303 AFDLAS  308 (331)
Q Consensus       303 ~~~i~~  308 (331)
                      ++.+.+
T Consensus       225 ~~~~~g  230 (235)
T PRK06550        225 IVPIDG  230 (235)
T ss_pred             EEEECC
Confidence            777765

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.77  E-value=1.6e-17  Score=145.09  Aligned_cols=208  Identities=17%  Similarity=0.171  Sum_probs=138.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +++|||||+|+||++++++|+++  |++|+++.| +++..+.+       ..++.++.+|+.|++.+.++++       +
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999  999999998 43332221       2357799999999988877664       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|+||||+|.....  .+.       +...++.....+.|+.+...    ++..+++.+.++||++||..+......   
T Consensus        79 id~vi~~ag~~~~~--~~~-------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~---  146 (242)
T TIGR01829        79 IDVLVNNAGITRDA--TFK-------KMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG---  146 (242)
T ss_pred             CcEEEECCCCCCCC--Chh-------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC---
Confidence            89999999864321  010       11111122334778887655    455556677889999999865432221   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                        ...|..+|...+.+++       ..+++++.++||++.++....  ...........+  ...+...+|+++++..++
T Consensus       147 --~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~l~  222 (242)
T TIGR01829       147 --QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIP--VGRLGRPEEIAAAVAFLA  222 (242)
T ss_pred             --cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCC--CCCCcCHHHHHHHHHHHc
Confidence              2458899987766554       358999999999998775321  011100000011  122457799999998877


Q ss_pred             cCcc--cCCceEEecc
Q 046297          295 QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~  308 (331)
                      .++.  ..|+.+.+.+
T Consensus       223 ~~~~~~~~G~~~~~~g  238 (242)
T TIGR01829       223 SEEAGYITGATLSING  238 (242)
T ss_pred             CchhcCccCCEEEecC
Confidence            6643  5678888886

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.3e-18  Score=146.96  Aligned_cols=199  Identities=15%  Similarity=0.117  Sum_probs=133.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh--hcCCCCcEEEccCCCcccHHHHhc-----------CC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ--KIGGADDLFIGDIRDSNSIIPAIQ-----------GI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~--~l~~~~~~v~~Dl~d~~~~~~~l~-----------~~  148 (331)
                      +|+||||||+|+||++++++|+++  |++|++++|+.++..  ....++.++++|+.|.+++.++++           ++
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   78 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASR   78 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCc
Confidence            368999999999999999999999  999999999865321  122347889999999998887442           47


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |++|||+|....... +.....+++       ....++|+.+...+.+    .+++.+.++||++||..+..+..+    
T Consensus        79 ~~~v~~ag~~~~~~~-~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  146 (243)
T PRK07023         79 VLLINNAGTVEPIGP-LATLDAAAI-------ARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG----  146 (243)
T ss_pred             eEEEEcCcccCCCCc-cccCCHHHH-------HHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC----
Confidence            899999997443211 111111222       3344889888555544    444455679999999876543322    


Q ss_pred             CcchHHHHHHHHHHHHH------hcCCCEEEEecCcccCCCcchhhhhccCCcc-------cc--CCcccccCHHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLA------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDE-------LL--QTETRTIARADVAEV  289 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~-------~~--~~~~~~i~v~Dva~~  289 (331)
                       ...|..+|...|.+++      ..+++++.++||.+-++....   +.+....       +.  ......+..+|+|+.
T Consensus       147 -~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  222 (243)
T PRK07023        147 -WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQAT---IRATDEERFPMRERFRELKASGALSTPEDAARR  222 (243)
T ss_pred             -chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHH---HHhcccccchHHHHHHHhhhcCCCCCHHHHHHH
Confidence             2469999999998876      258999999999986653211   1100000       00  001235788999997


Q ss_pred             HHHHhcCcc
Q 046297          290 CIQALQFEE  298 (331)
Q Consensus       290 ~~~~l~~~~  298 (331)
                      ++..+..+.
T Consensus       223 ~~~~l~~~~  231 (243)
T PRK07023        223 LIAYLLSDD  231 (243)
T ss_pred             HHHHHhccc
Confidence            777776654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=148.43  Aligned_cols=210  Identities=15%  Similarity=0.094  Sum_probs=142.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|+++.....       ..++.++.+|++|++++.++++      
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999  99999999987654332       2246788999999998887765      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~  222 (331)
                       ++|+||||+|.....  .+......++       ....++|+.++.++++++...   .-++||++||..+..+..   
T Consensus        85 ~~iD~vi~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~---  152 (264)
T PRK07576         85 GPIDVLVSGAAGNFPA--PAAGMSANGF-------KTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP---  152 (264)
T ss_pred             CCCCEEEECCCCCCCC--ccccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC---
Confidence             479999999853211  0111111112       223378999998888877532   225899999986543221   


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC------CccccCCcccccCHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK------DDELLQTETRTIARADVAEV  289 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~------~~~~~~~~~~~i~v~Dva~~  289 (331)
                        ....|..+|...+.+.+       ..+++++.++||.+.+..... ......      ....+  ...+...+|+|++
T Consensus       153 --~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~  227 (264)
T PRK07576        153 --MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMA-RLAPSPELQAAVAQSVP--LKRNGTKQDIANA  227 (264)
T ss_pred             --CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHh-hcccCHHHHHHHHhcCC--CCCCCCHHHHHHH
Confidence              12469999999888766       257899999999987532111 000000      00011  1235788999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..|+.+.+.+
T Consensus       228 ~~~l~~~~~~~~~G~~~~~~g  248 (264)
T PRK07576        228 ALFLASDMASYITGVVLPVDG  248 (264)
T ss_pred             HHHHcChhhcCccCCEEEECC
Confidence            999997643  3577777766

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=3e-17  Score=144.69  Aligned_cols=212  Identities=15%  Similarity=0.131  Sum_probs=141.5

Q ss_pred             CCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCchhh---hc-CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           81 AKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEESKQ---KI-GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        81 ~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~---~l-~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      .+++++||||+  +.||+.++++|+++  |++|++..|+.+..+   ++ ...+.++++|++|++++.++++       +
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            46889999999  79999999999999  999999999743222   22 2246789999999998887664       5


Q ss_pred             CCEEEEcccCCCCCC--CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMK--PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|++|||||......  ..+.....+++       ...+++|+.+...+++++...  .-.++|++||..+.....   .
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~-------~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~---~  153 (252)
T PRK06079         84 IDGIVHAIAYAKKEELGGNVTDTSRDGY-------ALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIP---N  153 (252)
T ss_pred             CCEEEEcccccccccccCCcccCCHHHH-------HHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCC---c
Confidence            899999999753210  11111122222       233488988877777666532  125899999987643221   1


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-h---hhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-I---RELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~---~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      +  ..|+.+|...+.+.+       ..|++++.|.||.+-.+... .   ...........+.  ..+..++|+|++++.
T Consensus       154 ~--~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~pedva~~~~~  229 (252)
T PRK06079        154 Y--NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD--GVGVTIEEVGNTAAF  229 (252)
T ss_pred             c--hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc--cCCCCHHHHHHHHHH
Confidence            1  459999999887665       36899999999999776321 1   0110000001111  235788999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++....  ..|+++.+.+
T Consensus       230 l~s~~~~~itG~~i~vdg  247 (252)
T PRK06079        230 LLSDLSTGVTGDIIYVDK  247 (252)
T ss_pred             HhCcccccccccEEEeCC
Confidence            987642  4567777765

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4e-17  Score=144.64  Aligned_cols=212  Identities=19%  Similarity=0.167  Sum_probs=141.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh---hc---CCCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ---KI---GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~---~l---~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +.+++++||||+|+||++++++|+++  |++|++++|+.+..+   ++   ..++.++.+|+.|++++.++++       
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            34688999999999999999999999  999999999864221   11   2346789999999998887765       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||+|......  +.    ..+..   ......++|+.+...+++++.    +.+.++||++||..+.....+  
T Consensus        82 ~id~vi~~ag~~~~~~--~~----~~~~~---~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--  150 (263)
T PRK08226         82 RIDILVNNAGVCRLGS--FL----DMSDE---DRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADP--  150 (263)
T ss_pred             CCCEEEECCCcCCCCC--cc----cCCHH---HHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCC--
Confidence            5799999999743211  11    11111   112334789999888887764    345568999998754211111  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----------hhhccCCccccCCcccccCHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----------ELLVGKDDELLQTETRTIARAD  285 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~i~v~D  285 (331)
                        ....|+.+|...+.+.+       ..+++++.++||++.++.....          ..........+  ...+..++|
T Consensus       151 --~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~  226 (263)
T PRK08226        151 --GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP--LRRLADPLE  226 (263)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC--CCCCCCHHH
Confidence              11459999998887665       2479999999999987632110          00000000011  112468999


Q ss_pred             HHHHHHHHhcCc--ccCCceEEecc
Q 046297          286 VAEVCIQALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~--~~~~~~~~i~~  308 (331)
                      +|++++.++...  ...|+.+.+.+
T Consensus       227 va~~~~~l~~~~~~~~~g~~i~~dg  251 (263)
T PRK08226        227 VGELAAFLASDESSYLTGTQNVIDG  251 (263)
T ss_pred             HHHHHHHHcCchhcCCcCceEeECC
Confidence            999998887643  24567777765

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=146.59  Aligned_cols=211  Identities=17%  Similarity=0.150  Sum_probs=136.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe-cCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV-RTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~-R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++||||||+|+||+.+++.|+++  |++|+++. |++++.+.+       ..++.++++|+.|++++.++++       
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            568999999999999999999999  99998765 444333221       2357899999999988877664       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH-cC------CCeEEEEccCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA-AG------AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~-~~------vk~~v~~SS~~~~~~~~  219 (331)
                      ++|+||||+|....... +......++       ....++|+.+...+++++.+ ..      -.+||++||..+.....
T Consensus        80 ~id~li~~ag~~~~~~~-~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~  151 (248)
T PRK06947         80 RLDALVNNAGIVAPSMP-LADMDAARL-------RRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP  151 (248)
T ss_pred             CCCEEEECCccCCCCCC-hhhCCHHHH-------HHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC
Confidence            58999999997432110 111111111       22337888888777654432 11      23699999986543321


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      . . +  ..|..+|...+.+.+       ..+++++++|||++.++....   ...........+  ......++|+++.
T Consensus       152 ~-~-~--~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~e~va~~  225 (248)
T PRK06947        152 N-E-Y--VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTP--LGRAGEADEVAET  225 (248)
T ss_pred             C-C-C--cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCC--CCCCcCHHHHHHH
Confidence            1 1 1  348899999886654       358999999999998774211   000000000011  1124678999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.++.  ..|+.+.+.+
T Consensus       226 ~~~l~~~~~~~~~G~~~~~~g  246 (248)
T PRK06947        226 IVWLLSDAASYVTGALLDVGG  246 (248)
T ss_pred             HHHHcCccccCcCCceEeeCC
Confidence            999988764  4667777654

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.5e-17  Score=147.06  Aligned_cols=213  Identities=17%  Similarity=0.089  Sum_probs=145.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchhhh----c---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESKQK----I---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++.++|+||||+|+||+++++.|+++  |++ |++++|++++...    +   ...+.++.+|++|++.+.++++     
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999  999 9999998655432    2   2246678999999998887765     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk~~v~~SS~~~~~~~~  219 (331)
                        ++|+|||++|.....  .+..       ...+......++|+.+..++++++.+    .+ ..+||++||..++....
T Consensus        82 ~g~id~li~~ag~~~~~--~~~~-------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~  152 (260)
T PRK06198         82 FGRLDALVNAAGLTDRG--TILD-------TSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP  152 (260)
T ss_pred             hCCCCEEEECCCcCCCC--Chhh-------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC
Confidence              589999999964321  0001       11111122347889888888777643    22 35799999987643222


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-hhhhccCCccc------cCCcccccCHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-RELLVGKDDEL------LQTETRTIARAD  285 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~~~~~~~~~~~------~~~~~~~i~v~D  285 (331)
                      .     ...|+.+|..+|.+.+       ..+++++.++||++.++.... .....+....+      ......+++.+|
T Consensus       153 ~-----~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (260)
T PRK06198        153 F-----LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDE  227 (260)
T ss_pred             C-----cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHH
Confidence            1     1459999999887766       256899999999998875321 11101100000      001133579999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++++.++.++.  ..|+.+.+.+
T Consensus       228 ~a~~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        228 VARAVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             HHHHHHHHcChhhCCccCceEeECC
Confidence            9999999887653  4678888886

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.76  E-value=5.4e-17  Score=143.85  Aligned_cols=217  Identities=13%  Similarity=0.031  Sum_probs=144.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .+++++||||+|+||++++++|+++  |++|++++|++++.+.+    ...+.++++|++|++++.++++       ++|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAE--GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            4678999999999999999999999  99999999987665543    3347889999999988877764       589


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      ++|||+|......+ +......+   ..+.....+++|+.+...+++++...   .-.++|++||..+..+....     
T Consensus        83 ~li~~ag~~~~~~~-~~~~~~~~---~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-----  153 (263)
T PRK06200         83 CFVGNAGIWDYNTS-LVDIPAET---LDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGG-----  153 (263)
T ss_pred             EEEECCCCcccCCC-cccCChhH---HHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCC-----
Confidence            99999997432110 10111111   00001233488999887777776432   22589999998765433221     


Q ss_pred             chHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcchhhh------hccCC---ccccC-C-cccccCHHHHHHH
Q 046297          227 GNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGIREL------LVGKD---DELLQ-T-ETRTIARADVAEV  289 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~~~~------~~~~~---~~~~~-~-~~~~i~v~Dva~~  289 (331)
                      ..|+.+|...+.+.+.      .+++++.|.||++..+.......      ....+   ..+.. . ...+...+|+|.+
T Consensus       154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~  233 (263)
T PRK06200        154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGP  233 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhh
Confidence            3599999998877652      35899999999997664211000      00000   00000 0 1235688999999


Q ss_pred             HHHHhcCc-c--cCCceEEecc
Q 046297          290 CIQALQFE-E--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~-~--~~~~~~~i~~  308 (331)
                      ++.++.++ .  ..|+.+.+.+
T Consensus       234 ~~fl~s~~~~~~itG~~i~vdg  255 (263)
T PRK06200        234 YVLLASRRNSRALTGVVINADG  255 (263)
T ss_pred             hhheecccccCcccceEEEEcC
Confidence            99988755 3  4677787765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.76  E-value=3.4e-17  Score=143.08  Aligned_cols=201  Identities=17%  Similarity=0.215  Sum_probs=133.3

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCC-CcEEEccCCCcccHHHHhc--
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGA-DDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~-~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      ....++.|+||||+.+||.+++.+|.++  |.+++.+.|..++++..        ..+ +..+++|++|.+++.++++  
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            3445789999999999999999999999  99988888876655432        234 8899999999999997763  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHH----HHHHHHHHcCCCeEEEEccCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQK----NQIDAAKAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~vk~~v~~SS~~~~~~  217 (331)
                           ++|++|||||......  .+....       ++....+++|+.|+.    .++..+++.+-.+||.+||..+.. 
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~--~~~~~~-------~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~-  155 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGF--LEDTDI-------EDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM-  155 (282)
T ss_pred             HHhcCCCCEEEecCccccccc--cccCcH-------HHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc-
Confidence                 7999999999865221  111111       122345699998854    455556666667999999998743 


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH----h---cCCCEE-EEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHH-
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA----D---SGIPYT-IIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAE-  288 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~----~---~~~~~~-ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~-  288 (331)
                      ..|..    ..|.++|++.+.+..    +   .+..+. ++.||+|-......  ...+....  .........+|++. 
T Consensus       156 ~~P~~----~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~--~~~~~~~~--~~~~~~~~~~~~~~~  227 (282)
T KOG1205|consen  156 PLPFR----SIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGK--ELLGEEGK--SQQGPFLRTEDVADP  227 (282)
T ss_pred             CCCcc----cccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccch--hhcccccc--ccccchhhhhhhhhH
Confidence            33332    248899999988765    1   232222 58999987653211  11111111  11223344455544 


Q ss_pred             -HHHHHhcCcc
Q 046297          289 -VCIQALQFEE  298 (331)
Q Consensus       289 -~~~~~l~~~~  298 (331)
                       .+..++..+.
T Consensus       228 ~~~~~~i~~~~  238 (282)
T KOG1205|consen  228 EAVAYAISTPP  238 (282)
T ss_pred             HHHHHHHhcCc
Confidence             7777776654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.76  E-value=2.7e-17  Score=145.73  Aligned_cols=215  Identities=16%  Similarity=0.096  Sum_probs=143.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC----CCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG----GADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~----~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .+++++||||+|+||++++++|+++  |++|++++|+.++.+++.    ..+.++++|+.|.+++.++++       ++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            4688999999999999999999999  999999999876655442    247788999999888777664       579


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      ++|||||......+ +....   ++...++....+++|+.++..+++++...   .-+++|++||..+..+...     .
T Consensus        82 ~li~~Ag~~~~~~~-~~~~~---~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----~  152 (262)
T TIGR03325        82 CLIPNAGIWDYSTA-LVDIP---DDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG-----G  152 (262)
T ss_pred             EEEECCCCCccCCc-cccCC---chhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC-----C
Confidence            99999996432111 00001   01000112334589999988888887542   1257888888766433221     1


Q ss_pred             chHHHHHHHHHHHHH----h--cCCCEEEEecCcccCCCcchhhh-hccC-----------CccccCCcccccCHHHHHH
Q 046297          227 GNILVWKRKAEQYLA----D--SGIPYTIIRAGGLQDKEGGIREL-LVGK-----------DDELLQTETRTIARADVAE  288 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~----~--~~~~~~ilrp~~v~g~~~~~~~~-~~~~-----------~~~~~~~~~~~i~v~Dva~  288 (331)
                      ..|..+|...+.+.+    +  ..++++.|.||++..+....... ....           ...++  ...+...+|+|+
T Consensus       153 ~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~eva~  230 (262)
T TIGR03325       153 PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLP--IGRMPDAEEYTG  230 (262)
T ss_pred             chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCC--CCCCCChHHhhh
Confidence            359999999987765    2  23889999999997764211000 0000           00011  123567899999


Q ss_pred             HHHHHhcCcc---cCCceEEecc
Q 046297          289 VCIQALQFEE---AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~---~~~~~~~i~~  308 (331)
                      +++.++.++.   ..|+++.+.+
T Consensus       231 ~~~~l~s~~~~~~~tG~~i~vdg  253 (262)
T TIGR03325       231 AYVFFATRGDTVPATGAVLNYDG  253 (262)
T ss_pred             heeeeecCCCcccccceEEEecC
Confidence            9999887532   3677777765

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.3e-17  Score=145.19  Aligned_cols=196  Identities=17%  Similarity=0.130  Sum_probs=136.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhc------CC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQ------GI  148 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~------~~  148 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|++++.+.+      ..++.++.+|++|++.+.++++      ++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999999999  99999999987665443      2357899999999988877654      57


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+|||++|.....  .+......++       ....++|+.++.++++++..    .+.+++|++||..+..+..     
T Consensus        82 d~lv~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----  147 (263)
T PRK09072         82 NVLINNAGVNHFA--LLEDQDPEAI-------ERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP-----  147 (263)
T ss_pred             CEEEECCCCCCcc--ccccCCHHHH-------HHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-----
Confidence            9999999864321  0111111111       23347899998888877653    3456899999876533221     


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      ....|+.+|...+.+++       ..+++++.+.||.+.++....   ......  ........+++|+|+.++.+++++
T Consensus       148 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~---~~~~~~--~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        148 GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE---AVQALN--RALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh---hccccc--ccccCCCCCHHHHHHHHHHHHhCC
Confidence            12459999998776554       357999999999987654221   000000  001123578999999999999875

>TIGR02415 23BDH acetoin reductases

Probab=99.76  E-value=3.1e-17  Score=144.48  Aligned_cols=210  Identities=19%  Similarity=0.146  Sum_probs=139.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ++++||||+|+||++++++|++.  |++|+++.|++++..++       ...+.++.+|++|++.+.++++       .+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46999999999999999999999  99999999986544322       2247789999999998887764       57


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC-CCeEEEEccCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG-AKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      |+||||+|.....  .+......++       ...+++|+.+...+++++    ++.+ -++||++||..+..+...   
T Consensus        79 d~vi~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  146 (254)
T TIGR02415        79 DVMVNNAGVAPIT--PILEITEEEL-------KKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI---  146 (254)
T ss_pred             CEEEECCCcCCCC--CcccCCHHHH-------HHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC---
Confidence            9999999974321  0111111222       233478888877666554    3333 268999999765443322   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hhhhhccC-Ccccc---------CCcccccCHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IRELLVGK-DDELL---------QTETRTIARAD  285 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~~~~~~~-~~~~~---------~~~~~~i~v~D  285 (331)
                        ...|+.+|...+.+.+       ..++++++++||.+.++... ........ ...+.         .....+.+++|
T Consensus       147 --~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
T TIGR02415       147 --LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPED  224 (254)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHH
Confidence              2458999999887765       24799999999988665421 11000000 00000         00123678899


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++++..++..+.  ..|+.+.+.+
T Consensus       225 ~a~~~~~l~~~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       225 VAGLVSFLASEDSDYITGQSILVDG  249 (254)
T ss_pred             HHHHHHhhcccccCCccCcEEEecC
Confidence            9999999998754  3466666654

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.76  E-value=3.4e-17  Score=145.32  Aligned_cols=217  Identities=15%  Similarity=0.072  Sum_probs=143.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      +.+++++||||+|+||+++++.|+++  |++|++++|++.+...  ..+.++++|++|++++.++++       ++|+||
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDGQH--ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcccccc--CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45688999999999999999999999  9999999998765432  347789999999998887765       579999


Q ss_pred             EcccCCCCCCCCCCCCC-CCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          153 ILTSAVPKMKPDFDPAK-GGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      ||||....... .++.. ....+...++.....++|+.+...+++++..    .+-.+||++||..+......     ..
T Consensus        83 ~~Ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~  156 (266)
T PRK06171         83 NNAGINIPRLL-VDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG-----QS  156 (266)
T ss_pred             ECCcccCCccc-cccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC-----Cc
Confidence            99996432100 00000 0000111111123347899888888877653    34468999999876443222     24


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccC-CCcc--hhh------------hhccCCc--cccCCcccccCH
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQD-KEGG--IRE------------LLVGKDD--ELLQTETRTIAR  283 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g-~~~~--~~~------------~~~~~~~--~~~~~~~~~i~v  283 (331)
                      .|..+|...+.+.+       ..++++++++||.+.. +...  ...            .......  ..+  ...+...
T Consensus       157 ~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~~  234 (266)
T PRK06171        157 CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP--LGRSGKL  234 (266)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc--CCCCCCH
Confidence            69999999887665       3589999999998852 2111  000            0000000  111  1234678


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+|+++..++....  ..|+++.+.+
T Consensus       235 ~eva~~~~fl~s~~~~~itG~~i~vdg  261 (266)
T PRK06171        235 SEVADLVCYLLSDRASYITGVTTNIAG  261 (266)
T ss_pred             HHhhhheeeeeccccccceeeEEEecC
Confidence            999999999887543  4577777765

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5.5e-17  Score=141.71  Aligned_cols=194  Identities=12%  Similarity=0.070  Sum_probs=133.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCc--ccHHHHh----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDS--NSIIPAI----  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~--~~~~~~l----  145 (331)
                      +.+++|+||||+|+||+++++.|+++  |++|++++|++++.+.+        .....++.+|+.|.  +.+.+++    
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            34678999999999999999999999  99999999998655432        12366788999753  3444333    


Q ss_pred             ----cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCC
Q 046297          146 ----QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       146 ----~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~  217 (331)
                          .++|+||||||...... .+.+..+++++..       +++|+.+...+++++.    +.+..++|++||..+..+
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~-~~~~~~~~~~~~~-------~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  153 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALS-PLDFQTVAEWVNQ-------YRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP  153 (239)
T ss_pred             HHhCCCCCEEEEeccccccCC-CccccCHHHHHHH-------HHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC
Confidence                36899999999643211 1112222223333       3889998777776663    345579999999765433


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHh-------c-CCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLAD-------S-GIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~~-------~-~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      ....     ..|+.+|...+.+.+.       . ++++++++||++.++....  ...+.      ....+...+|++..
T Consensus       154 ~~~~-----~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~--~~~~~------~~~~~~~~~~~~~~  220 (239)
T PRK08703        154 KAYW-----GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK--SHPGE------AKSERKSYGDVLPA  220 (239)
T ss_pred             CCCc-----cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc--cCCCC------CccccCCHHHHHHH
Confidence            2211     3599999998887652       2 5899999999999885321  11111      11235789999999


Q ss_pred             HHHHhcC
Q 046297          290 CIQALQF  296 (331)
Q Consensus       290 ~~~~l~~  296 (331)
                      ++.++..
T Consensus       221 ~~~~~~~  227 (239)
T PRK08703        221 FVWWASA  227 (239)
T ss_pred             HHHHhCc
Confidence            9999874

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.76  E-value=4.2e-17  Score=143.77  Aligned_cols=211  Identities=14%  Similarity=0.044  Sum_probs=142.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhh---cCCCCcEEEccCCCcccHHHHhc-------C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQK---IGGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~---l~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      ..+++++||||+|+||++++++|++.  |++|++++|....  .+.   +...+..+++|++|.+++.++++       +
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            44688999999999999999999999  9999988875421  112   22346788999999988888775       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CCeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk~~v~~SS~~~~~~~~~~~  222 (331)
                      +|++|||||.....  .+.....++++.       ..++|+.+...+++++..    .+ -.++|++||..+....... 
T Consensus        86 ~D~li~~Ag~~~~~--~~~~~~~~~~~~-------~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  155 (253)
T PRK08993         86 IDILVNNAGLIRRE--DAIEFSEKDWDD-------VMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV-  155 (253)
T ss_pred             CCEEEECCCCCCCC--CcccCCHHHHHH-------HHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC-
Confidence            89999999964321  111112222333       348999998887777643    22 2589999998765433221 


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                          ..|..+|...+.+.+       ..|++++.++||++..+.....    .........++.  ..+...+|+|+.++
T Consensus       156 ----~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~p~eva~~~~  229 (253)
T PRK08993        156 ----PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA--GRWGLPSDLMGPVV  229 (253)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC--CCCcCHHHHHHHHH
Confidence                358899999887665       3689999999999987642110    000000011111  23678899999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.+..  ..|+++.+.+
T Consensus       230 ~l~s~~~~~~~G~~~~~dg  248 (253)
T PRK08993        230 FLASSASDYINGYTIAVDG  248 (253)
T ss_pred             HHhCccccCccCcEEEECC
Confidence            9987653  4567776654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.2e-17  Score=147.15  Aligned_cols=198  Identities=16%  Similarity=0.138  Sum_probs=133.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C---CC-CcEEEccCCCcccHHHHhc-------C
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G---GA-DDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~---~~-~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      ++++||||+|+||.++++.|+++  |++|++++|+++..+..    .   .. ..++.+|++|++.+.++++       +
T Consensus         1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            46999999999999999999999  99999999987654332    1   12 4557899999988776664       4


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----Hc-CCCeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AA-GAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~-~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      +|+||||+|.....  .....+..++       ...+++|+.+...+++++.    +. ..++||++||..+..+...  
T Consensus        79 id~lv~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~--  147 (272)
T PRK07832         79 MDVVMNIAGISAWG--TVDRLTHEQW-------RRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPW--  147 (272)
T ss_pred             CCEEEECCCCCCCC--ccccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCC--
Confidence            89999999964321  1111222222       3344889999988888764    22 2468999999865332211  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhcc---CCcc---ccC-CcccccCHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVG---KDDE---LLQ-TETRTIARADVAE  288 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~---~~~~---~~~-~~~~~i~v~Dva~  288 (331)
                         ...|+.+|...+.+.+       ..++++++++||.+.++....... .+   ....   ... .....++.+|+|+
T Consensus       148 ---~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vA~  223 (272)
T PRK07832        148 ---HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEI-AGVDREDPRVQKWVDRFRGHAVTPEKAAE  223 (272)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccc-cccCcchhhHHHHHHhcccCCCCHHHHHH
Confidence               1358899987665543       468999999999998774221100 00   0000   000 1123589999999


Q ss_pred             HHHHHhcCc
Q 046297          289 VCIQALQFE  297 (331)
Q Consensus       289 ~~~~~l~~~  297 (331)
                      .++.++..+
T Consensus       224 ~~~~~~~~~  232 (272)
T PRK07832        224 KILAGVEKN  232 (272)
T ss_pred             HHHHHHhcC
Confidence            999999654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=4.5e-17  Score=142.04  Aligned_cols=206  Identities=18%  Similarity=0.113  Sum_probs=139.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C--CCCcEEEccCCCcccHHHHhc-------C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G--GADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~--~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      .+++|+||||+|+||+++++.|+++  |++|++++|++++.+.+    .  .++.++++|+.|++.+.++++       +
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999  99999999988765433    1  247889999999998877664       4


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +|.++|++|......       ..+    .++.....+.|+.+...+++.+...  .-.+||++||..+.....+    .
T Consensus        82 id~ii~~ag~~~~~~-------~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----~  146 (238)
T PRK05786         82 IDGLVVTVGGYVEDT-------VEE----FSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP----D  146 (238)
T ss_pred             CCEEEEcCCCcCCCc-------hHH----HHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC----C
Confidence            699999998532210       000    1111223367777766666665432  1257999998765221111    1


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      ...|..+|...+.+++       ..+++++++|||+++++......+ ..    ........++.+|+++.++.++..+.
T Consensus       147 ~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~-~~----~~~~~~~~~~~~~va~~~~~~~~~~~  221 (238)
T PRK05786        147 QLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNW-KK----LRKLGDDMAPPEDFAKVIIWLLTDEA  221 (238)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhh-hh----hccccCCCCCHHHHHHHHHHHhcccc
Confidence            1459999988775543       358999999999999874321111 10    11112235788999999999997643


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..|+.+.+.+
T Consensus       222 ~~~~g~~~~~~~  233 (238)
T PRK05786        222 DWVDGVVIPVDG  233 (238)
T ss_pred             cCccCCEEEECC
Confidence              3567777654

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.75  E-value=3.4e-17  Score=136.00  Aligned_cols=229  Identities=18%  Similarity=0.202  Sum_probs=169.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      ..+|||||+-|.+|..+++.|..++ |.+-++++.--...+.....-.++..|+.|...+++++-  ++|.+||..+..+
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~y-Gs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLS  122 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMY-GSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLS  122 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHh-CCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHHHHH
Confidence            5689999999999999999998876 665555543222223333446788899999999999884  7999999987655


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCc-------chHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGN-------GNILVW  232 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~-------~~y~~s  232 (331)
                      ..++       .+       ..-..++|+.|..|+++.|++++.+-|| -|+.+++.++.|.++.+.       ..|+.+
T Consensus       123 AvGE-------~N-------VpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGPtSPRNPTPdltIQRPRTIYGVS  187 (366)
T KOG2774|consen  123 AVGE-------TN-------VPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGPTSPRNPTPDLTIQRPRTIYGVS  187 (366)
T ss_pred             Hhcc-------cC-------CceeeeecchhhhHHHHHHHHcCeeEee-cccccccCCCCCCCCCCCeeeecCceeechh
Confidence            4332       11       1122389999999999999999986666 488888888888776554       679999


Q ss_pred             HHHHHH----HHHhcCCCEEEEecCcccCCC---cc--------hhhhhccCCcc---ccCCcccccCHHHHHHHHHHHh
Q 046297          233 KRKAEQ----YLADSGIPYTIIRAGGLQDKE---GG--------IRELLVGKDDE---LLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       233 K~~~e~----~~~~~~~~~~ilrp~~v~g~~---~~--------~~~~~~~~~~~---~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                      |..+|-    +-.+.|+++.++|...++...   ++        +...+...+..   -++...+..+.+|+-+++++.+
T Consensus       188 KVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~  267 (366)
T KOG2774|consen  188 KVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLL  267 (366)
T ss_pred             HHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHH
Confidence            987764    344789999999988887642   22        23333332222   2467788899999999999999


Q ss_pred             cCcc--cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          295 QFEE--AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ..+.  .+.++||+.    +..+|.+|+++.+.+.+-.
T Consensus       268 ~a~~~~lkrr~ynvt----~~sftpee~~~~~~~~~p~  301 (366)
T KOG2774|consen  268 AADSQSLKRRTYNVT----GFSFTPEEIADAIRRVMPG  301 (366)
T ss_pred             hCCHHHhhhheeeec----eeccCHHHHHHHHHhhCCC
Confidence            8764  456899999    4889999999999887643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.75  E-value=2.3e-17  Score=146.04  Aligned_cols=217  Identities=11%  Similarity=0.079  Sum_probs=138.1

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-Cchhhh----c----CCCCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQK----I----GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~----l----~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ++.++++|||||+++||+++++.|+++  |++|+++.|+ ++..+.    +    ...+.++++|++|++++.++++   
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            355789999999999999999999999  9999988764 333221    1    2247789999999998887775   


Q ss_pred             ----CCCEEEEcccCCCCCC-CCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMK-PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~  217 (331)
                          ++|++|||||...... ..+.+....+++    .....+++|+.+...    +++.+++.+-++||++||..+...
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~----~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPK----GLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY  158 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHH----HHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC
Confidence                5899999998643210 000111111111    112233666665444    444455555569999999865332


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-h---hhhhccCCccccCCcccccCHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-I---RELLVGKDDELLQTETRTIARADV  286 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~---~~~~~~~~~~~~~~~~~~i~v~Dv  286 (331)
                      ....     ..|+.+|..++.+.+       ..|++++.|+||++-.+... +   ...........+  ...+..++|+
T Consensus       159 ~~~~-----~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~~r~~~p~~v  231 (260)
T PRK08416        159 IENY-----AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP--LNRMGQPEDL  231 (260)
T ss_pred             CCCc-----ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC--CCCCCCHHHH
Confidence            2211     358899999887765       35899999999998665311 0   000000000011  1235789999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |.+++.++....  ..|+.+.+.+
T Consensus       232 a~~~~~l~~~~~~~~~G~~i~vdg  255 (260)
T PRK08416        232 AGACLFLCSEKASWLTGQTIVVDG  255 (260)
T ss_pred             HHHHHHHcChhhhcccCcEEEEcC
Confidence            999999887542  4577777765

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.75  E-value=8.6e-17  Score=145.82  Aligned_cols=215  Identities=15%  Similarity=0.008  Sum_probs=134.9

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c-----CCCCcEEEccCCCcccHHHHhc--
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I-----GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l-----~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      .+..+++|+||||+|+||+++++.|+++  |++|++++|+.++..+    +     ...+.++.+|+.|.+++.++++  
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            3455789999999999999999999999  9999999998655332    2     1247789999999998887764  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCC-
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTN-  216 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~-  216 (331)
                           ++|+||||||......    ......++.       .+++|+.+    +..+++.+++.+.++||++||..+.. 
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~----~~~~~~~~~-------~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~  158 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPK----QTTADGFEL-------QFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIR  158 (306)
T ss_pred             HhhCCCCCEEEECCccccCCC----ccCCCCcch-------hhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhcc
Confidence                 5899999999743210    111222233       34889888    66677777777778999999975321 


Q ss_pred             CCCC-------CCCCCcchHHHHHHHHHHHHH-------hcCCCEEE--EecCcccCCCcchhhhhccCCccccCCcccc
Q 046297          217 LNHP-------LNSLGNGNILVWKRKAEQYLA-------DSGIPYTI--IRAGGLQDKEGGIRELLVGKDDELLQTETRT  280 (331)
Q Consensus       217 ~~~~-------~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~i--lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  280 (331)
                      ...+       ........|+.+|...+.+.+       ..++++++  +.||++..+................. .+-.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~  237 (306)
T PRK06197        159 AAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLA-PLLA  237 (306)
T ss_pred             CCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHH-hhhc
Confidence            1000       011122579999999876654       24666654  47999977643210000000000000 0112


Q ss_pred             cCHHHHHHHHHHHhcCcc-cCCceEEe
Q 046297          281 IARADVAEVCIQALQFEE-AKFKAFDL  306 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~-~~~~~~~i  306 (331)
                      ...+.-+...+.+...+. ..|+.|+.
T Consensus       238 ~~~~~g~~~~~~~~~~~~~~~g~~~~~  264 (306)
T PRK06197        238 QSPEMGALPTLRAATDPAVRGGQYYGP  264 (306)
T ss_pred             CCHHHHHHHHHHHhcCCCcCCCeEEcc
Confidence            345666666666665554 34554543

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.4e-17  Score=143.80  Aligned_cols=210  Identities=18%  Similarity=0.057  Sum_probs=142.4

Q ss_pred             CCCeEEEECCCC-hhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------C-CCCcEEEccCCCcccHHHHhc----
Q 046297           81 AKSTVLVTGAGG-RTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------G-GADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        81 ~~~~VlVtGatG-~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~-~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      .+++++||||+| .||+++++.|+++  |++|++++|++++.++.        . .++.++++|++|++.+.++++    
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999997 7999999999999  99999999987654331        1 247789999999988887764    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~~  218 (331)
                         ++|+||||+|.....  .+.....++++.       .+++|+.+...+++++.    +.+ -.+||++||..+..+.
T Consensus        94 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~  164 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQT--PVVDMTDDEWSR-------VLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ  164 (262)
T ss_pred             HcCCCCEEEECCCCCCCC--CcccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC
Confidence               579999999964321  111112222222       33788888777766653    333 4589999887664433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      .+.     ..|..+|...+.+.+       .+++++++|+||.+..+....   ...........+  ...+..++|+|+
T Consensus       165 ~~~-----~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~--~~r~~~p~~va~  237 (262)
T PRK07831        165 HGQ-----AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREA--FGRAAEPWEVAN  237 (262)
T ss_pred             CCC-----cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCC--CCCCcCHHHHHH
Confidence            222     359999999987765       368999999999998874321   000000000011  123567899999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++....  ..|+++.+.+
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCC
Confidence            9999887653  4577777665

>PRK06484 short chain dehydrogenase; Validated

Probab=99.75  E-value=2.3e-17  Score=160.23  Aligned_cols=211  Identities=16%  Similarity=0.079  Sum_probs=148.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .++++|||||+|+||+++++.|+++  |++|++++|++++.+.+    ..+...+.+|++|++++.++++       ++|
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999  99999999987665443    3346778999999998887775       489


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      +||||||...... .+.....+++       ..++++|+.++..+++++...  +-.+||++||..+.....+.     .
T Consensus       346 ~li~nAg~~~~~~-~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----~  412 (520)
T PRK06484        346 VLVNNAGIAEVFK-PSLEQSAEDF-------TRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPR-----N  412 (520)
T ss_pred             EEEECCCCcCCCC-ChhhCCHHHH-------HHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCC-----c
Confidence            9999999743211 1111122222       334489999998888887653  33589999998775433222     4


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh-----hhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE-----LLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                      .|+.+|...+.+.+       ..|+++++|+||++.++......     .........+.  ..+..++|+|++++.++.
T Consensus       413 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dia~~~~~l~s  490 (520)
T PRK06484        413 AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL--GRLGDPEEVAEAIAFLAS  490 (520)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhC
Confidence            59999999887665       35899999999999876421100     00000001111  124689999999999887


Q ss_pred             Ccc--cCCceEEecc
Q 046297          296 FEE--AKFKAFDLAS  308 (331)
Q Consensus       296 ~~~--~~~~~~~i~~  308 (331)
                      ...  ..|+.+.+.+
T Consensus       491 ~~~~~~~G~~i~vdg  505 (520)
T PRK06484        491 PAASYVNGATLTVDG  505 (520)
T ss_pred             ccccCccCcEEEECC
Confidence            543  5678888876

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.7e-17  Score=141.58  Aligned_cols=191  Identities=14%  Similarity=0.110  Sum_probs=132.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCcccHHHHhc-----CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNSIIPAIQ-----GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~  154 (331)
                      +++|+||||+|++|+++++.|+++  |++|++++|++++.+.+.  .++.++.+|++|++++.++++     ++|+||||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~   78 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVN   78 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence            367999999999999999999999  999999999986654432  247888999999988877775     58999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCCCCCcchHHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLNSLGNGNILV  231 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~  231 (331)
                      +|...............       +.....++|+.+...+++++...   +...++++||..+.....+....  ..|..
T Consensus        79 ag~~~~~~~~~~~~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~--~~Y~~  149 (225)
T PRK08177         79 AGISGPAHQSAADATAA-------EIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEM--PLYKA  149 (225)
T ss_pred             CcccCCCCCCcccCCHH-------HHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCc--cchHH
Confidence            99753321111111112       22334488888888888777532   33578888887553322221111  35999


Q ss_pred             HHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          232 WKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       232 sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      +|...+.+.+       ..+++++.++||++-.+...       .        ...++....++.++..+++..
T Consensus       150 sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~-------~--------~~~~~~~~~~~~~~~~~~~~~  208 (225)
T PRK08177        150 SKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG-------D--------NAPLDVETSVKGLVEQIEAAS  208 (225)
T ss_pred             HHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC-------C--------CCCCCHHHHHHHHHHHHHhCC
Confidence            9999987776       25789999999999766421       0        012456666777777766553

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.4e-17  Score=137.79  Aligned_cols=188  Identities=16%  Similarity=0.170  Sum_probs=133.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc---CCCEEEEcccCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ---GIDALIILTSAVP  159 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~ag~~~  159 (331)
                      |+++||||+|+||+++++.|.++   ++|++++|++.          .+++|++|+++++++++   ++|+||||+|...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            47999999999999999999886   78999999753          46899999999988876   6899999999642


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAE  237 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e  237 (331)
                      ..  .+......++       .+..++|+.+..++++++...  +..+|+++||..+..+..     ....|..+|...+
T Consensus        68 ~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~-----~~~~Y~~sK~a~~  133 (199)
T PRK07578         68 FA--PLAEMTDEDF-------NVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP-----GGASAATVNGALE  133 (199)
T ss_pred             CC--chhhCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC-----CchHHHHHHHHHH
Confidence            21  1111111122       333478899988888877542  235799999887643321     1246999999887


Q ss_pred             HHHH------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEec
Q 046297          238 QYLA------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       238 ~~~~------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~  307 (331)
                      .+.+      ..+++++.++||++-.+.......       ++  ...+++.+|+|+.++.+++.. ..|++|+++
T Consensus       134 ~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~~~-------~~--~~~~~~~~~~a~~~~~~~~~~-~~g~~~~~~  199 (199)
T PRK07578        134 GFVKAAALELPRGIRINVVSPTVLTESLEKYGPF-------FP--GFEPVPAARVALAYVRSVEGA-QTGEVYKVG  199 (199)
T ss_pred             HHHHHHHHHccCCeEEEEEcCCcccCchhhhhhc-------CC--CCCCCCHHHHHHHHHHHhccc-eeeEEeccC
Confidence            6655      358999999999986653211111       11  134689999999999998764 556777753

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.2e-16  Score=138.16  Aligned_cols=200  Identities=12%  Similarity=0.106  Sum_probs=139.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhc-----CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQ-----GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~a  155 (331)
                      +++++||||+|+||++++++|+++  |++|++++|+++..+++. ..++++.+|++|.+.+.++++     ++|+|||++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence            367999999999999999999999  999999999877655543 246789999999998888642     489999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCCCCCcchHHHH
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLNSLGNGNILVW  232 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~s  232 (331)
                      |...............++       ....++|+.++.++++++...   .-.+++++||..+.....+...  ...|..+
T Consensus        79 g~~~~~~~~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~--~~~Y~~s  149 (222)
T PRK06953         79 GVYGPRTEGVEPITREDF-------DAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTT--GWLYRAS  149 (222)
T ss_pred             CcccCCCCCcccCCHHHH-------HHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCC--ccccHHh
Confidence            975322111111122223       334489999999999888642   2347899998754333222211  1359999


Q ss_pred             HHHHHHHHHh-----cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEE
Q 046297          233 KRKAEQYLAD-----SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFD  305 (331)
Q Consensus       233 K~~~e~~~~~-----~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~  305 (331)
                      |...+.+++.     .+++++.++||++..+...               ...++..++.++.+..++....  ..+..|.
T Consensus       150 K~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (222)
T PRK06953        150 KAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------AQAALDPAQSVAGMRRVIAQATRRDNGRFFQ  214 (222)
T ss_pred             HHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------CCCCCCHHHHHHHHHHHHHhcCcccCceEEe
Confidence            9999887763     3678999999999776421               1224678999999998876543  3344444


Q ss_pred             ec
Q 046297          306 LA  307 (331)
Q Consensus       306 i~  307 (331)
                      ..
T Consensus       215 ~~  216 (222)
T PRK06953        215 YD  216 (222)
T ss_pred             eC
Confidence            44

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.8e-17  Score=146.03  Aligned_cols=209  Identities=18%  Similarity=0.141  Sum_probs=139.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC---------chhhh----c---CCCCcEEEccCCCcccHHH
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE---------ESKQK----I---GGADDLFIGDIRDSNSIIP  143 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~---------~~~~~----l---~~~~~~v~~Dl~d~~~~~~  143 (331)
                      ..++++|||||+++||+++++.|+++  |++|++++|+.         +..+.    +   ..++.++.+|++|++++.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence            34688999999999999999999999  99999998765         33222    2   2246788999999988877


Q ss_pred             Hhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC------CCeE
Q 046297          144 AIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG------AKQI  206 (331)
Q Consensus       144 ~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~------vk~~  206 (331)
                      +++       ++|++|||||.....  .+.....++++..       +++|+.++..+++++.    +.+      -.+|
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~--~~~~~~~~~~~~~-------~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~I  152 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDR--MIANMSEEEWDAV-------IAVHLKGHFATLRHAAAYWRAESKAGRAVDARI  152 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCC--CcccCCHHHHHHH-------HHHccHHHHHHHHHHHHHHHHhcccCCCCCcEE
Confidence            664       589999999974321  1112222333333       4889999777766653    221      2489


Q ss_pred             EEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hhhhhccCCccccCCcc
Q 046297          207 VLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IRELLVGKDDELLQTET  278 (331)
Q Consensus       207 v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~~~~~~  278 (331)
                      |++||..+..+...     ...|..+|..++.+.+       ..|++++.|.|| +..+... ........   .+....
T Consensus       153 v~isS~~~~~~~~~-----~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~---~~~~~~  223 (286)
T PRK07791        153 INTSSGAGLQGSVG-----QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAK---PEEGEF  223 (286)
T ss_pred             EEeCchhhCcCCCC-----chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhc---Cccccc
Confidence            99999876443221     2459999999887655       368999999998 4333211 10000010   111112


Q ss_pred             cccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          279 RTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ....++|+|++++.++....  ..|+.+.+.+
T Consensus       224 ~~~~pedva~~~~~L~s~~~~~itG~~i~vdg  255 (286)
T PRK07791        224 DAMAPENVSPLVVWLGSAESRDVTGKVFEVEG  255 (286)
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCcEEEEcC
Confidence            35689999999999887532  4677777765

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.74  E-value=2.8e-17  Score=150.10  Aligned_cols=169  Identities=17%  Similarity=0.153  Sum_probs=116.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c---CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I---GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..+++|+||||+|+||.++++.|+++  |++|++++|+.++.+.    +   ...+.++.+|++|.+++.++++      
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            34688999999999999999999999  9999999998765433    2   1247789999999998887775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC--CCeEEEEccCCCCCC--
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG--AKQIVLVGSMGGTNL--  217 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~--vk~~v~~SS~~~~~~--  217 (331)
                       ++|+||||||....... ........++.       .+++|+.++..+++++..    .+  .++||++||......  
T Consensus        82 ~~iD~li~nAg~~~~~~~-~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~  153 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLK-EPLRSPQGYEL-------SMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKEL  153 (322)
T ss_pred             CCccEEEECCcccCCCCC-CCCCCHHHHHH-------HHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCcccc
Confidence             48999999996432110 00111122333       348999998887776643    33  359999999643110  


Q ss_pred             --C--C------------------C------CCCCCcchHHHHHHHHHHH----HHh----cCCCEEEEecCcccCC
Q 046297          218 --N--H------------------P------LNSLGNGNILVWKRKAEQY----LAD----SGIPYTIIRAGGLQDK  258 (331)
Q Consensus       218 --~--~------------------~------~~~~~~~~y~~sK~~~e~~----~~~----~~~~~~ilrp~~v~g~  258 (331)
                        .  .                  |      ....+...|+.+|...+.+    .++    .++++++++||++++.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        154 GGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             CCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence              0  0                  0      0001225799999876543    333    4799999999999753

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.74  E-value=5.5e-17  Score=147.72  Aligned_cols=191  Identities=16%  Similarity=0.109  Sum_probs=130.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---------CCCcEEEccCCC--cccHH---HHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---------GADDLFIGDIRD--SNSII---PAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---------~~~~~v~~Dl~d--~~~~~---~~l~~  147 (331)
                      ++.++||||+|+||++++++|+++  |++|++++|++++.+++.         .++..+.+|+++  .+.+.   +.+.+
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            467999999999999999999999  999999999987655421         235677899985  23233   33343


Q ss_pred             --CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCC-CCCC
Q 046297          148 --IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTN-LNHP  220 (331)
Q Consensus       148 --~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~-~~~~  220 (331)
                        +|++|||||........+...+.+       +....+++|+.++..+.+++    ++.+.++||++||..+.. +..|
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~-------~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p  203 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEE-------LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDP  203 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHH-------HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCc
Confidence              569999999743211111111111       12334488998877766654    455667999999987642 2112


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      .    ...|+.+|...+.+.+       ..|+++++++||++..+....     ..      ......+.+++|+.++..
T Consensus       204 ~----~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~-----~~------~~~~~~~p~~~A~~~~~~  268 (320)
T PLN02780        204 L----YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI-----RR------SSFLVPSSDGYARAALRW  268 (320)
T ss_pred             c----chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc-----cC------CCCCCCCHHHHHHHHHHH
Confidence            1    2569999999887654       358999999999997764321     00      111135889999999999


Q ss_pred             hcC
Q 046297          294 LQF  296 (331)
Q Consensus       294 l~~  296 (331)
                      +..
T Consensus       269 ~~~  271 (320)
T PLN02780        269 VGY  271 (320)
T ss_pred             hCC
Confidence            964

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.74  E-value=6.3e-17  Score=139.98  Aligned_cols=199  Identities=12%  Similarity=0.080  Sum_probs=138.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhc----CCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQ----GIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~----~~d~Vi~~ag  156 (331)
                      |+++||||+|+||+++++.|+++  |++|++++|++++.+++..  ++.++++|++|++++.++++    ++|++|||+|
T Consensus         1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            46999999999999999999999  9999999999876655432  36789999999999888775    5899999998


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR  234 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~  234 (331)
                      ........ ......+.   .++-...+++|+.+...+++++...  .-.+||++||...     +    ....|..+|.
T Consensus        79 ~~~~~~~~-~~~~~~~~---~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-----~----~~~~Y~asKa  145 (223)
T PRK05884         79 PSWDAGDP-RTYSLADT---ANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-----P----AGSAEAAIKA  145 (223)
T ss_pred             ccccCCCC-cccchhcC---HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC-----C----CccccHHHHH
Confidence            53211000 00001111   1122344589999988888776532  2258999998651     1    1145999999


Q ss_pred             HHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEE
Q 046297          235 KAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFD  305 (331)
Q Consensus       235 ~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~  305 (331)
                      ..+.+.+       .++++++.|.||++..+...   ...         ..+.-.++|+++.+..++..+.  ..|+++.
T Consensus       146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~---~~~---------~~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~  213 (223)
T PRK05884        146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD---GLS---------RTPPPVAAEIARLALFLTTPAARHITGQTLH  213 (223)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh---hcc---------CCCCCCHHHHHHHHHHHcCchhhccCCcEEE
Confidence            9887654       36899999999998765311   000         0112378999999999887543  4677777


Q ss_pred             ecc
Q 046297          306 LAS  308 (331)
Q Consensus       306 i~~  308 (331)
                      +.+
T Consensus       214 vdg  216 (223)
T PRK05884        214 VSH  216 (223)
T ss_pred             eCC
Confidence            765

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.74  E-value=9.6e-17  Score=143.12  Aligned_cols=199  Identities=18%  Similarity=0.208  Sum_probs=135.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-------hh-------cCCCCcEEEccCCCcccHHHHh
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-------QK-------IGGADDLFIGDIRDSNSIIPAI  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-------~~-------l~~~~~~v~~Dl~d~~~~~~~l  145 (331)
                      +.+++++||||+|+||+++++.|+++  |++|++++|+.+..       .+       ...++.++.+|++|++.+.+++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            34678999999999999999999999  99999999976421       11       1234678899999999888777


Q ss_pred             c-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCC
Q 046297          146 Q-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGG  214 (331)
Q Consensus       146 ~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~  214 (331)
                      +       ++|+||||+|.....  .....+.++++.       ..++|+.++..+++++..    .+-.++|++||..+
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~-------~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  152 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINLT--GTEDTPMKRFDL-------MQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLN  152 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCC--CcccCCHHHHHH-------HHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchh
Confidence            5       689999999964321  111112222233       337899998888888753    33458999998754


Q ss_pred             CCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHH
Q 046297          215 TNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       215 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      ..+.. ..  ....|+.+|..+|.+.+       ..+++++.+.||.++.... ... ..+...    ....+...+|+|
T Consensus       153 ~~~~~-~~--~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~-~~~-~~~~~~----~~~~~~~p~~va  223 (273)
T PRK08278        153 LDPKW-FA--PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA-VRN-LLGGDE----AMRRSRTPEIMA  223 (273)
T ss_pred             ccccc-cC--CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH-HHh-cccccc----cccccCCHHHHH
Confidence            33221 01  12469999999998765       3589999999995433221 111 111111    112357899999


Q ss_pred             HHHHHHhcCcc
Q 046297          288 EVCIQALQFEE  298 (331)
Q Consensus       288 ~~~~~~l~~~~  298 (331)
                      +.++.++..+.
T Consensus       224 ~~~~~l~~~~~  234 (273)
T PRK08278        224 DAAYEILSRPA  234 (273)
T ss_pred             HHHHHHhcCcc
Confidence            99999987643

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.2e-16  Score=141.20  Aligned_cols=208  Identities=17%  Similarity=0.143  Sum_probs=142.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c----CCCCcEEEccCCCcccHHHHhc---CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I----GGADDLFIGDIRDSNSIIPAIQ---GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l----~~~~~~v~~Dl~d~~~~~~~l~---~~d  149 (331)
                      .+++++||||+|+||+++++.|+++  |++|++++|++++.+.    +    ...+.++.+|++|++++.++++   ++|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            4688999999999999999999999  9999999998765443    2    1246788999999998887775   589


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      ++|||+|.....  .+.....++++.       .+++|+.+...+++++    ++.+-+++|++||..+..+..   .+ 
T Consensus        84 ~lv~~ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---~~-  150 (259)
T PRK06125         84 ILVNNAGAIPGG--GLDDVDDAAWRA-------GWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDA---DY-  150 (259)
T ss_pred             EEEECCCCCCCC--CcccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCC---Cc-
Confidence            999999974321  111222222233       3378888876666654    444456899999886643222   12 


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhc-------cCC-------ccccCCcccccCHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLV-------GKD-------DELLQTETRTIARA  284 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~-------~~~-------~~~~~~~~~~i~v~  284 (331)
                       ..|..+|...+.+.+       ..+++++.++||.+..+...  ....       +..       ...+.  ..+..++
T Consensus       151 -~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  225 (259)
T PRK06125        151 -ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML--TLLKGRARAELGDESRWQELLAGLPL--GRPATPE  225 (259)
T ss_pred             -hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH--HHHHhhhhcccCCHHHHHHHhccCCc--CCCcCHH
Confidence             357889999876665       35899999999999876321  1100       000       01111  2356899


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEecc
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |+|++++.++.+..  ..|+.+.+.+
T Consensus       226 ~va~~~~~l~~~~~~~~~G~~i~vdg  251 (259)
T PRK06125        226 EVADLVAFLASPRSGYTSGTVVTVDG  251 (259)
T ss_pred             HHHHHHHHHcCchhccccCceEEecC
Confidence            99999999887542  4677777776

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.74  E-value=1.1e-16  Score=141.60  Aligned_cols=213  Identities=15%  Similarity=0.134  Sum_probs=139.9

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCc------hhhhcC---CCCcEEEccCCCcccHHHHhc--
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEE------SKQKIG---GADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~------~~~~l~---~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      +.+++++||||+  +.||++++++|+++  |++|++..|+.+      ..+++.   ....++++|++|++++.++++  
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            346789999986  79999999999999  999988865432      222232   235688999999999887774  


Q ss_pred             -----CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCC
Q 046297          147 -----GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~  217 (331)
                           ++|++|||+|.....  ...+...+.+++       ...+++|+.+...+++++...  .-++||++||..+..+
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~-------~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~  154 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGF-------ARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA  154 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHH-------HHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC
Confidence                 589999999964321  011111122222       334489999977776665421  1258999999876432


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-h---hhhhccCCccccCCcccccCHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-I---RELLVGKDDELLQTETRTIARADV  286 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~---~~~~~~~~~~~~~~~~~~i~v~Dv  286 (331)
                      ..   .+  ..|..+|...+.+.+       ..|++++.|.||++..+... .   ...........+  ...+...+|+
T Consensus       155 ~~---~~--~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~~~dv  227 (258)
T PRK07370        155 IP---NY--NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP--LRRTVTQTEV  227 (258)
T ss_pred             Cc---cc--chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC--cCcCCCHHHH
Confidence            21   11  459999999887665       36899999999999775321 0   010000000011  1235678999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++..++.++.  ..|+++.+.+
T Consensus       228 a~~~~fl~s~~~~~~tG~~i~vdg  251 (258)
T PRK07370        228 GNTAAFLLSDLASGITGQTIYVDA  251 (258)
T ss_pred             HHHHHHHhChhhccccCcEEEECC
Confidence            999999987543  4567777765

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=1.5e-16  Score=141.76  Aligned_cols=213  Identities=15%  Similarity=0.125  Sum_probs=140.1

Q ss_pred             CCCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCch---hhhcC---CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEES---KQKIG---GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~~---~~~l~---~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++++++|||||++  .||+.++++|+++  |++|++..|+...   .+++.   .....+++|++|++++.++++     
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            3468899999997  9999999999999  9999999987532   22221   223578999999998887764     


Q ss_pred             --CCCEEEEcccCCCCCC--CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMK--PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||......  ..+.....+++       ...+++|+.+...+++++...  .-.+||++||..+.... |
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~-------~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~-~  154 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENF-------SRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM-P  154 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHH-------HHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC-C
Confidence              5899999999743210  11111222222       233488988877776665432  12589999998754321 1


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hhh---hhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IRE---LLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~~---~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                        .+  ..|..+|..++.+.+       ..|++++.|.||++..+... ...   .........+-  ..+..++|+|++
T Consensus       155 --~~--~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~peeva~~  228 (271)
T PRK06505        155 --NY--NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL--RRTVTIDEVGGS  228 (271)
T ss_pred             --cc--chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc--cccCCHHHHHHH
Confidence              12  359999999887665       36899999999999775321 100   00000001111  124678999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..|+.+.+.+
T Consensus       229 ~~fL~s~~~~~itG~~i~vdg  249 (271)
T PRK06505        229 ALYLLSDLSSGVTGEIHFVDS  249 (271)
T ss_pred             HHHHhCccccccCceEEeecC
Confidence            999987543  4577777776

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=1.9e-16  Score=139.93  Aligned_cols=213  Identities=15%  Similarity=0.126  Sum_probs=139.5

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCC---chhhhc-----CCCCcEEEccCCCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTE---ESKQKI-----GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~---~~~~~l-----~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +.+++++||||+  +.||++++++|+++  |++|+++.|+.   +..+++     ..++.++++|++|++++.++++   
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            346889999997  89999999999999  99999988753   222222     1346788999999998887764   


Q ss_pred             ----CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~  218 (331)
                          ++|++|||+|.....  ...+...+...+       ...+++|+.+...+++++...  .-.+||++||..+..+.
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  155 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGF-------LLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV  155 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHH-------HHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC
Confidence                589999999864321  011111111111       223478888877666665432  12589999998764322


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      .   .+  ..|..+|...+.+.+       ..|++++.|.||.+..+....    ...........+  ...+..++|+|
T Consensus       156 ~---~~--~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~~va  228 (257)
T PRK08594        156 Q---NY--NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAP--LRRTTTQEEVG  228 (257)
T ss_pred             C---CC--chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCC--ccccCCHHHHH
Confidence            1   11  359999999887665       368999999999997753110    000000000111  12356889999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++.++....  ..|+.+.+.+
T Consensus       229 ~~~~~l~s~~~~~~tG~~~~~dg  251 (257)
T PRK08594        229 DTAAFLFSDLSRGVTGENIHVDS  251 (257)
T ss_pred             HHHHHHcCcccccccceEEEECC
Confidence            99999887543  4577777765

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.3e-17  Score=162.10  Aligned_cols=196  Identities=17%  Similarity=0.217  Sum_probs=139.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .+.+++++||||+|+||+++++.|+++  |++|++++|+++..+++       ..++.++.+|++|.+++.++++     
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEA--GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            345689999999999999999999999  99999999987664432       2347889999999999888776     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||.......       .+....+++....+++|+.++..++++    +++.+.++||++||.+++.....
T Consensus       446 ~g~id~li~~Ag~~~~~~~-------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  518 (657)
T PRK07201        446 HGHVDYLVNNAGRSIRRSV-------ENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR  518 (657)
T ss_pred             cCCCCEEEECCCCCCCCCh-------hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC
Confidence              58999999996422110       000000111223348898887666555    45667789999999877543221


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                           ...|+.+|...+.+.+       ..++++++++||++.++.....       ...  ......+.+++|+.++.+
T Consensus       519 -----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~-------~~~--~~~~~~~~~~~a~~i~~~  584 (657)
T PRK07201        519 -----FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT-------KRY--NNVPTISPEEAADMVVRA  584 (657)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-------ccc--cCCCCCCHHHHHHHHHHH
Confidence                 1459999999887765       3589999999999987643211       000  122357899999999998


Q ss_pred             hcCc
Q 046297          294 LQFE  297 (331)
Q Consensus       294 l~~~  297 (331)
                      +...
T Consensus       585 ~~~~  588 (657)
T PRK07201        585 IVEK  588 (657)
T ss_pred             HHhC
Confidence            7643

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=1.3e-16  Score=140.01  Aligned_cols=201  Identities=16%  Similarity=0.144  Sum_probs=135.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C----CCCcEEEccCC--CcccHHHHh-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G----GADDLFIGDIR--DSNSIIPAI-----  145 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~----~~~~~v~~Dl~--d~~~~~~~l-----  145 (331)
                      ..++|+||||+|+||.+++++|+++  |++|++++|+.++.+.+    .    ..+.++.+|+.  +++++.+++     
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999  99999999987654332    1    23667888886  455444443     


Q ss_pred             --cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCC
Q 046297          146 --QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       146 --~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~  219 (331)
                        .++|+|||+||......+ +.......++.       ..++|+.++..+++++    ++.+.++||++||..+.....
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~-~~~~~~~~~~~-------~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~  160 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGP-MEQQDPEVWQD-------VMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA  160 (247)
T ss_pred             HhCCCCEEEECCcccCCCCC-cccCCHHHHHH-------HHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCC
Confidence              368999999987433211 11111122223       3378999877777665    456778999999986543322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      ..     ..|+.+|..++.+++       ..++++++++||.+.++...  ......      ....+...+|++++++.
T Consensus       161 ~~-----~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~--~~~~~~------~~~~~~~~~~~~~~~~~  227 (247)
T PRK08945        161 NW-----GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA--SAFPGE------DPQKLKTPEDIMPLYLY  227 (247)
T ss_pred             CC-----cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh--hhcCcc------cccCCCCHHHHHHHHHH
Confidence            22     358999999887665       24788999999988665211  011111      11235788999999999


Q ss_pred             HhcCcc--cCCceE
Q 046297          293 ALQFEE--AKFKAF  304 (331)
Q Consensus       293 ~l~~~~--~~~~~~  304 (331)
                      ++.++.  ..|+++
T Consensus       228 ~~~~~~~~~~g~~~  241 (247)
T PRK08945        228 LMGDDSRRKNGQSF  241 (247)
T ss_pred             HhCccccccCCeEE
Confidence            886543  345543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=1.3e-16  Score=142.24  Aligned_cols=211  Identities=13%  Similarity=0.084  Sum_probs=139.2

Q ss_pred             CCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCc---hhhhc----CCCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEE---SKQKI----GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~---~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .+++++||||+  ++||+.++++|+++  |++|++.+|+.+   ..+++    ... .++++|++|++++.++++     
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            46889999997  79999999999999  999999999742   22222    222 578999999998887764     


Q ss_pred             --CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||.....  ...+.....+++       ...+++|+.+...+.+++...  .-.+||++||..+..+.. 
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~-  152 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAF-------NIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP-  152 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHH-------HHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC-
Confidence              589999999974321  011111222222       234489998877776665432  125899999987643221 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                        .+  ..|..+|...+.+.+       ..|++++.|.||++..+....    ...........+-  ..+..++|+|++
T Consensus       153 --~~--~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl--~r~~~pedva~~  226 (274)
T PRK08415        153 --HY--NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL--KKNVSIEEVGNS  226 (274)
T ss_pred             --cc--hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch--hccCCHHHHHHH
Confidence              11  459999999876655       368999999999997653110    0000000001111  234788999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..|+.+.+.+
T Consensus       227 v~fL~s~~~~~itG~~i~vdG  247 (274)
T PRK08415        227 GMYLLSDLSSGVTGEIHYVDA  247 (274)
T ss_pred             HHHHhhhhhhcccccEEEEcC
Confidence            999987542  4677777765

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=1.8e-16  Score=141.23  Aligned_cols=213  Identities=14%  Similarity=0.080  Sum_probs=141.6

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCC---chhhhcC---CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTE---ESKQKIG---GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~---~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.++++|||||+  +.||.++++.|+++  |++|+++.|++   ++.+++.   .....+++|++|++++.++++     
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            346789999997  89999999999999  99999888863   2233332   224578999999998887764     


Q ss_pred             --CCCEEEEcccCCCCCC--CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMK--PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||......  ..+.....+++       ...+++|+.+...+++++...  +-.++|++||.++....  
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~-------~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~--  156 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNF-------TMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM--  156 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHH-------HHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC--
Confidence              5899999999743210  11111111222       334488999988888876543  22589999987653321  


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc----hhhhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG----IRELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                       +.+  ..|..+|...+.+.+       ..++++++|.||++..+...    ............+-  ..+..++|+|++
T Consensus       157 -p~~--~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~peevA~~  231 (272)
T PRK08159        157 -PHY--NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL--RRTVTIEEVGDS  231 (272)
T ss_pred             -Ccc--hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcc--cccCCHHHHHHH
Confidence             112  459999999887665       36899999999999764211    00000000001111  124688999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++....  ..|+++.+.+
T Consensus       232 ~~~L~s~~~~~itG~~i~vdg  252 (272)
T PRK08159        232 ALYLLSDLSRGVTGEVHHVDS  252 (272)
T ss_pred             HHHHhCccccCccceEEEECC
Confidence            999997543  4677777776

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.73  E-value=1.8e-16  Score=140.36  Aligned_cols=211  Identities=13%  Similarity=0.053  Sum_probs=137.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh----c---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK----I---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ..+++++||||+|+||+++++.|+++  |++|+++.|+... ...    +   ..++.++.+|++|.+.+.++++     
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999  9999998886432 221    1   2346788999999998887764     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcC-CCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAG-AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~-vk~~v~~SS~~~~~~~~  219 (331)
                        ++|++|||+|......  +......++       ...+++|+.+...    +++.+++.+ -+++|++||.....+..
T Consensus        83 ~g~id~lv~~ag~~~~~~--~~~~~~~~~-------~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~  153 (261)
T PRK08936         83 FGTLDVMINNAGIENAVP--SHEMSLEDW-------NKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP  153 (261)
T ss_pred             cCCCCEEEECCCCCCCCC--hhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC
Confidence              5899999999643210  111111122       2234778776544    455556554 35899999976543322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      +.     ..|+.+|...+.+.+       ..++++++|+||++.++....    ...........+  ...+...+|+++
T Consensus       154 ~~-----~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~  226 (261)
T PRK08936        154 LF-----VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP--MGYIGKPEEIAA  226 (261)
T ss_pred             CC-----cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCC--CCCCcCHHHHHH
Confidence            22     358899977765544       358999999999998774210    000000000111  123567899999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.++....  ..|..+.+.+
T Consensus       227 ~~~~l~s~~~~~~~G~~i~~d~  248 (261)
T PRK08936        227 VAAWLASSEASYVTGITLFADG  248 (261)
T ss_pred             HHHHHcCcccCCccCcEEEECC
Confidence            9999887543  3566666655

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=2.1e-16  Score=139.74  Aligned_cols=214  Identities=13%  Similarity=0.090  Sum_probs=141.0

Q ss_pred             cCCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCch---hhhcC---CCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEES---KQKIG---GADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~---~~~l~---~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ++.+++++||||+  +.||++++++|+++  |++|++.+|+.+.   .+++.   +...++++|++|++++.++++    
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence            3457899999998  59999999999999  9999999998542   22221   224678999999998887764    


Q ss_pred             ---CCCEEEEcccCCCCCC--CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMK--PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|++|||||......  ..+...+.+++       ...+++|+.+...+.+++...  .-.++|++||..+.... 
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~-------~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~-  156 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGF-------ALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVV-  156 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHH-------HHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCC-
Confidence               5899999999743210  01111111222       344588999987777765432  12489999998654321 


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc----hhhhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG----IRELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                        ..  ...|..+|...+.+.+       ..+++++.|.||.+..+...    ............+.  ..+..++|+|+
T Consensus       157 --~~--~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~p~dva~  230 (258)
T PRK07533        157 --EN--YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL--RRLVDIDDVGA  230 (258)
T ss_pred             --cc--chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc--CCCCCHHHHHH
Confidence              11  1458999999876654       36899999999999765321    01100000001111  23578899999


Q ss_pred             HHHHHhcCc--ccCCceEEecc
Q 046297          289 VCIQALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~--~~~~~~~~i~~  308 (331)
                      +++.++.++  ...|+.+.+.+
T Consensus       231 ~~~~L~s~~~~~itG~~i~vdg  252 (258)
T PRK07533        231 VAAFLASDAARRLTGNTLYIDG  252 (258)
T ss_pred             HHHHHhChhhccccCcEEeeCC
Confidence            999998763  24677777765

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.73  E-value=1.9e-16  Score=140.75  Aligned_cols=216  Identities=14%  Similarity=0.020  Sum_probs=133.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-Cchhhh----cC----CCCcEEEccCCCcccH----HHHh----
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQK----IG----GADDLFIGDIRDSNSI----IPAI----  145 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~----l~----~~~~~v~~Dl~d~~~~----~~~l----  145 (331)
                      +.++||||+|+||++++++|+++  |++|+++.|+ +++.+.    +.    ..+.++.+|++|.+.+    .+++    
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            46999999999999999999999  9999998765 333322    21    2356789999998754    3332    


Q ss_pred             ---cCCCEEEEcccCCCCCCCCCCCCCCCC--C--ccccccCCCcceehHHHHHHHHHHHHHcC----------CCeEEE
Q 046297          146 ---QGIDALIILTSAVPKMKPDFDPAKGGR--P--EFYFEEGAYPEQVDWIGQKNQIDAAKAAG----------AKQIVL  208 (331)
Q Consensus       146 ---~~~d~Vi~~ag~~~~~~~~~~~~~~~~--p--~~~~~~~~~~~~~nv~~~~~ll~aa~~~~----------vk~~v~  208 (331)
                         .++|+||||||......  +......+  .  +....+....+++|+.+...+++++....          ..++|+
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  157 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTP--LLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVN  157 (267)
T ss_pred             HccCCceEEEECCccCCCCc--ccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEE
Confidence               36899999999643211  10111100  0  00000012334888888887777653221          236888


Q ss_pred             EccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCccccc
Q 046297          209 VGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTI  281 (331)
Q Consensus       209 ~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i  281 (331)
                      ++|..+..+..+     ...|+.+|..++.+.+       ..|++++.|+||++..+...............+. .....
T Consensus       158 ~~s~~~~~~~~~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~-~~~~~  231 (267)
T TIGR02685       158 LCDAMTDQPLLG-----FTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPL-GQREA  231 (267)
T ss_pred             ehhhhccCCCcc-----cchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCC-CcCCC
Confidence            888765322211     1459999999887765       3689999999999865532111100000001111 12346


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ..+|++++++.++.++.  ..|+.+.+.+
T Consensus       232 ~~~~va~~~~~l~~~~~~~~~G~~~~v~g  260 (267)
T TIGR02685       232 SAEQIADVVIFLVSPKAKYITGTCIKVDG  260 (267)
T ss_pred             CHHHHHHHHHHHhCcccCCcccceEEECC
Confidence            89999999999987653  4677777776

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.73  E-value=1.2e-16  Score=139.47  Aligned_cols=206  Identities=16%  Similarity=0.124  Sum_probs=137.9

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhh----c---CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQK----I---GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      |+||||+|+||.++++.|+++  |++|+++.|+.+ +.+.    +   ..++.++.+|++|.+++.++++       ++|
T Consensus         1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999  999999887642 2221    1   2347889999999998877764       479


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH-----HHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA-----KAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa-----~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      ++|||+|.....  .+......+++.       ..++|+.++.++++++     ++.+.++||++||..+..+....   
T Consensus        79 ~li~~ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---  146 (239)
T TIGR01831        79 GVVLNAGITRDA--AFPALSEEDWDI-------VIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ---  146 (239)
T ss_pred             EEEECCCCCCCC--chhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC---
Confidence            999999974332  111122223333       3488999988888765     23455689999997654433222   


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hhhhhccCCccccCCcccccCHHHHHHHHHHHhcC
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IRELLVGKDDELLQTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                        ..|..+|...+.+.+       ..+++++.++||++.++... ............+  -..+...+|++++++.++..
T Consensus       147 --~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~va~~~~~l~~~  222 (239)
T TIGR01831       147 --VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVP--MNRMGQPAEVASLAGFLMSD  222 (239)
T ss_pred             --cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCC--CCCCCCHHHHHHHHHHHcCc
Confidence              358889987765544       35899999999999877532 1111100000111  11246789999999999886


Q ss_pred             cc--cCCceEEecc
Q 046297          297 EE--AKFKAFDLAS  308 (331)
Q Consensus       297 ~~--~~~~~~~i~~  308 (331)
                      +.  ..|+...+.+
T Consensus       223 ~~~~~~g~~~~~~g  236 (239)
T TIGR01831       223 GASYVTRQVISVNG  236 (239)
T ss_pred             hhcCccCCEEEecC
Confidence            43  3455555554

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=2.1e-16  Score=139.94  Aligned_cols=215  Identities=16%  Similarity=0.116  Sum_probs=137.6

Q ss_pred             CCCCeEEEECC--CChhHHHHHHHHHhcCCCCeEEEEecCC---chhhhcC---CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGA--GGRTGQIVYKKLKERSEQYAARGLVRTE---ESKQKIG---GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGa--tG~iG~~l~~~Ll~~~~g~~V~~l~R~~---~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++++||||  ++.||+++++.|+++  |++|++..|+.   +..+++.   .....+++|++|++++.++++     
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            34678999997  679999999999999  99999887753   2222332   234678999999999887774     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||........ .+ .+.  +...+.-....++|+.+...+.+++    ++.+ .+||++||.++..... 
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~-~~-~~~--~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~~~~~-  155 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALS-GD-FLD--SISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAVRAIP-  155 (261)
T ss_pred             hCCCcEEEECCccCCccccc-cc-hhh--hcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccccCCC-
Confidence              589999999975321000 00 000  0011111223477887766665544    3322 5899999987643221 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-h---hhhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-I---RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~---~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                        .+  ..|..+|...+.+.+       .+|++++.|.||++..+... .   ...........+  ...+..++|+|++
T Consensus       156 --~~--~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~peevA~~  229 (261)
T PRK08690        156 --NY--NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNP--LRRNVTIEEVGNT  229 (261)
T ss_pred             --Cc--ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCC--CCCCCCHHHHHHH
Confidence              11  358899999886654       46899999999999775321 0   010000000111  1235789999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.++.  ..|+++.+.+
T Consensus       230 v~~l~s~~~~~~tG~~i~vdg  250 (261)
T PRK08690        230 AAFLLSDLSSGITGEITYVDG  250 (261)
T ss_pred             HHHHhCcccCCcceeEEEEcC
Confidence            999998643  4677777765

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.7e-16  Score=137.84  Aligned_cols=185  Identities=12%  Similarity=0.100  Sum_probs=127.0

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhh-cCCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQK-IGGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~-l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      .-+.+++++||||+|+||++++++|+++  |++|++++|++. .... .......+.+|++|.+++.+.+.++|++||||
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnA   87 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNH   87 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence            3345688999999999999999999999  999999999862 2221 11223578899999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-------CCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-------GAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-------~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      |.....     ..+.++++.       .+++|+.+...+++++...       +-..++..||.++..+  +    ....
T Consensus        88 G~~~~~-----~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~--~----~~~~  149 (245)
T PRK12367         88 GINPGG-----RQDPENINK-------ALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP--A----LSPS  149 (245)
T ss_pred             ccCCcC-----CCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC--C----CCch
Confidence            963221     111223333       3489999988888776432       1123444455443322  1    1245


Q ss_pred             HHHHHHHHHHHH---H-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          229 ILVWKRKAEQYL---A-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       229 y~~sK~~~e~~~---~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      |+.+|...+.+.   +       +.++.++.+.||.+..+..                ....++.+|+|+.++.++.++.
T Consensus       150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~----------------~~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN----------------PIGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC----------------ccCCCCHHHHHHHHHHHHhcCC
Confidence            999999874322   1       3578888999988754421                0124789999999999997654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.72  E-value=1.2e-16  Score=158.72  Aligned_cols=213  Identities=15%  Similarity=0.148  Sum_probs=141.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-----CCCcEEEccCCCcccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-----GADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-----~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|+.+..+.+    .     ..+..+++|++|++++.++++    
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999  99999999987654332    1     135688999999999988876    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHcC-CCeEEEEccCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAAG-AKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~-vk~~v~~SS~~~~~~~  218 (331)
                         ++|+||||||.....  .+......+++.       .+++|+.+...+.    +.+++.+ -.+||++||..+..+.
T Consensus       490 ~~g~iDilV~nAG~~~~~--~~~~~~~e~~~~-------~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~  560 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSS--PFEETTLQEWQL-------NLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG  560 (676)
T ss_pred             hcCCCcEEEECCCCCCCC--CcccCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC
Confidence               689999999964321  111111112222       2367777765544    4444544 3589999997654332


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhh------ccCC----ccccC---Cc
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELL------VGKD----DELLQ---TE  277 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~------~~~~----~~~~~---~~  277 (331)
                      ..     ...|+.+|...+.+.+       ..+++++.|+|+.++.....+. .+.      .+..    ...+.   ..
T Consensus       561 ~~-----~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l  635 (676)
T TIGR02632       561 KN-----ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL  635 (676)
T ss_pred             CC-----CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCc
Confidence            21     2569999999887765       2589999999998873211100 000      0000    00000   11


Q ss_pred             ccccCHHHHHHHHHHHhcCc--ccCCceEEecc
Q 046297          278 TRTIARADVAEVCIQALQFE--EAKFKAFDLAS  308 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~--~~~~~~~~i~~  308 (331)
                      ..+++++|+|+++..++...  ...|+++++.+
T Consensus       636 ~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       636 KRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            34588999999999888653  24578899887

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=3e-16  Score=138.98  Aligned_cols=213  Identities=14%  Similarity=0.082  Sum_probs=138.8

Q ss_pred             CCCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCc---hhhhcC---CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEE---SKQKIG---GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~---~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++++||||++  .||+++++.|+++  |++|++..|++.   ..+++.   +...++++|++|++++.++++     
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            3467899999997  8999999999999  999999888742   222231   123457899999999887774     


Q ss_pred             --CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||+|.....  ...+...+.+++       ...+++|+.+...+++++...  .-.+||++||..+..... 
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~-------~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~-  155 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENF-------HNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP-  155 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHH-------HHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC-
Confidence              589999999864311  001111112222       334488988887777765322  125899999977643221 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                        .+  ..|+.+|...+.+.+       ..+++++.+.||.+..+....    ...........+-  ..+..++|+|++
T Consensus       156 --~~--~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~pedva~~  229 (260)
T PRK06603        156 --NY--NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL--KRNTTQEDVGGA  229 (260)
T ss_pred             --cc--cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc--CCCCCHHHHHHH
Confidence              11  458999999887655       468999999999997653110    0000000001111  225688999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..|+.+.+.+
T Consensus       230 ~~~L~s~~~~~itG~~i~vdg  250 (260)
T PRK06603        230 AVYLFSELSKGVTGEIHYVDC  250 (260)
T ss_pred             HHHHhCcccccCcceEEEeCC
Confidence            999997643  4567777765

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=5e-16  Score=137.15  Aligned_cols=209  Identities=13%  Similarity=-0.013  Sum_probs=136.4

Q ss_pred             CCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCC-----------chhhh----c---CCCCcEEEccCCCccc
Q 046297           81 AKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTE-----------ESKQK----I---GGADDLFIGDIRDSNS  140 (331)
Q Consensus        81 ~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~-----------~~~~~----l---~~~~~~v~~Dl~d~~~  140 (331)
                      ++++|+||||+|  +||++++++|+++  |++|++..|..           ++..+    +   ...+.++++|++|.++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            468899999995  8999999999999  99998875421           11111    1   2246788999999998


Q ss_pred             HHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHcCCCeEEEE
Q 046297          141 IIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAAGAKQIVLV  209 (331)
Q Consensus       141 ~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~vk~~v~~  209 (331)
                      +.++++       .+|+||||+|.....  .+.....+++       ....++|+.+...+.    +.+++.+-.+||++
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~i  153 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNN--DFSNLTAEEL-------DKHYMVNVRATTLLSSQFARGFDKKSGGRIINM  153 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEE
Confidence            887774       479999999974321  1111112222       233478888866654    44454445699999


Q ss_pred             ccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccC
Q 046297          210 GSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIA  282 (331)
Q Consensus       210 SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~  282 (331)
                      ||..+..+..+     ...|..+|..++.+.+       .++++++.++||++..+.... ..........+  ......
T Consensus       154 sS~~~~~~~~~-----~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-~~~~~~~~~~~--~~~~~~  225 (256)
T PRK12859        154 TSGQFQGPMVG-----ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-EIKQGLLPMFP--FGRIGE  225 (256)
T ss_pred             cccccCCCCCC-----chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-HHHHHHHhcCC--CCCCcC
Confidence            99876432222     2469999999887654       368999999999987653211 11000000111  112457


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .+|+|++++.++....  ..|+.+.+.+
T Consensus       226 ~~d~a~~~~~l~s~~~~~~~G~~i~~dg  253 (256)
T PRK12859        226 PKDAARLIKFLASEEAEWITGQIIHSEG  253 (256)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEeCC
Confidence            8999999999886542  3566666664

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.5e-16  Score=138.93  Aligned_cols=205  Identities=16%  Similarity=0.108  Sum_probs=137.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C---CCCcEEEccCCCcccHHHHhc------CC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G---GADDLFIGDIRDSNSIIPAIQ------GI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~---~~~~~v~~Dl~d~~~~~~~l~------~~  148 (331)
                      +++++|||| |+||+++++.|. +  |++|++++|++++.+++    .   .++.++++|++|++++.++++      ++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-A--GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            467899998 799999999995 7  99999999987654332    1   246789999999998887774      58


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCC-------
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNH-------  219 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~-------  219 (331)
                      |+||||||....         ..+++..+       ++|+.++.++++++...  .-+++|++||..+.....       
T Consensus        78 d~li~nAG~~~~---------~~~~~~~~-------~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~  141 (275)
T PRK06940         78 TGLVHTAGVSPS---------QASPEAIL-------KVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQER  141 (275)
T ss_pred             CEEEECCCcCCc---------hhhHHHHH-------HHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhc
Confidence            999999996321         12344444       89999999988877543  113567777765432210       


Q ss_pred             -------------CC-CC----CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-h-----hhhcc
Q 046297          220 -------------PL-NS----LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-R-----ELLVG  268 (331)
Q Consensus       220 -------------~~-~~----~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~-----~~~~~  268 (331)
                                   +. .+    .....|..+|...+.+.+       ..+++++.|.||++.++.... .     .....
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~  221 (275)
T PRK06940        142 ALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRN  221 (275)
T ss_pred             cccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHH
Confidence                         00 00    112469999999776554       368999999999998764210 0     00000


Q ss_pred             CCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          269 KDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       269 ~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .....+  ...+...+|+|++++.++....  ..|+.+.+.+
T Consensus       222 ~~~~~p--~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdg  261 (275)
T PRK06940        222 MFAKSP--AGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDG  261 (275)
T ss_pred             HhhhCC--cccCCCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence            000011  1235789999999999886543  4567777765

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=3.6e-16  Score=138.41  Aligned_cols=213  Identities=16%  Similarity=0.144  Sum_probs=138.9

Q ss_pred             CCCCeEEEECC--CChhHHHHHHHHHhcCCCCeEEEEecC---CchhhhcC---CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGA--GGRTGQIVYKKLKERSEQYAARGLVRT---EESKQKIG---GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGa--tG~iG~~l~~~Ll~~~~g~~V~~l~R~---~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +..++++||||  ++.||++++++|+++  |++|+++.|.   .+..+++.   +....+++|++|++++.++++     
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence            34678999996  679999999999999  9999988654   33333321   223578999999999988774     


Q ss_pred             --CCCEEEEcccCCCCCC--CC-CCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMK--PD-FDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~--~~-~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~  219 (331)
                        ++|++|||||......  .. ....+.+++       ...+++|+.+...+.+++...  +-+++|++||..+..+. 
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~-------~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~-  153 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENF-------RIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV-  153 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHH-------HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC-
Confidence              5899999999743210  00 001111122       333488998887777766532  22589999998764321 


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-h---hhhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-I---RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~---~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                        ..  ...|..+|...+.+.+       .++++++.|.||++..+... .   ...........+-  ..+..++|+++
T Consensus       154 --~~--~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~pedva~  227 (260)
T PRK06997        154 --PN--YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL--RRNVTIEEVGN  227 (260)
T ss_pred             --CC--cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc--cccCCHHHHHH
Confidence              11  1459999999887665       36899999999998764211 0   0000000001111  13468999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++..+.  ..|+++.+.+
T Consensus       228 ~~~~l~s~~~~~itG~~i~vdg  249 (260)
T PRK06997        228 VAAFLLSDLASGVTGEITHVDS  249 (260)
T ss_pred             HHHHHhCccccCcceeEEEEcC
Confidence            9999987643  4677777765

>PRK05855 short chain dehydrogenase; Validated

Probab=99.71  E-value=1.5e-16  Score=156.33  Aligned_cols=203  Identities=16%  Similarity=0.103  Sum_probs=139.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .+..+++|||||+|+||++++++|+++  |++|++++|+.++.+++       ..++.++.+|++|++.+.++++     
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            345688999999999999999999999  99999999987655432       2346889999999998887775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC-CCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG-AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-vk~~v~~SS~~~~~~~~  219 (331)
                        ++|+||||||.....  .+.....+++       ...+++|+.|..++++++    ++.+ -.+||++||..++.+..
T Consensus       390 ~g~id~lv~~Ag~~~~~--~~~~~~~~~~-------~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  460 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAG--GFLDTSAEDW-------DRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR  460 (582)
T ss_pred             cCCCcEEEECCccCCCC--CcccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC
Confidence              489999999974321  1111111222       333478998887777664    4444 25899999987754332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCc--------ccc-CCcccccCH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDD--------ELL-QTETRTIAR  283 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~--------~~~-~~~~~~i~v  283 (331)
                      .     ...|+.+|...+.+.+       +.|+++++++||.+-.+....... .+...        ... .........
T Consensus       461 ~-----~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p  534 (582)
T PRK05855        461 S-----LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRF-AGADAEDEARRRGRADKLYQRRGYGP  534 (582)
T ss_pred             C-----CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcccc-CCcccchhhhHHhhhhhhccccCCCH
Confidence            2     2469999999876654       368999999999997653211100 00000        000 001123578


Q ss_pred             HHHHHHHHHHhcCcc
Q 046297          284 ADVAEVCIQALQFEE  298 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~  298 (331)
                      +|+|+.++.++..+.
T Consensus       535 ~~va~~~~~~~~~~~  549 (582)
T PRK05855        535 EKVAKAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999998754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.71  E-value=4.1e-16  Score=135.81  Aligned_cols=211  Identities=11%  Similarity=0.048  Sum_probs=134.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh---cCCCEEEEcccCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI---QGIDALIILTSAVP  159 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l---~~~d~Vi~~ag~~~  159 (331)
                      |+|+||||+|+||++++++|+++++++.|+...|+.... ....++.++++|++|.+.+.++.   .++|+||||+|...
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~   79 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLH   79 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcccc
Confidence            579999999999999999999984456777777755332 11235788999999998876654   47899999999754


Q ss_pred             CCCCCCCC-CCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHH
Q 046297          160 KMKPDFDP-AKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR  234 (331)
Q Consensus       160 ~~~~~~~~-~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~  234 (331)
                      ....  ++ ....+.  ..+.....+++|+.+...+++.+    ++.+..+++++||..+.....+...+  ..|+.+|.
T Consensus        80 ~~~~--~~~~~~~~~--~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~--~~Y~asK~  153 (235)
T PRK09009         80 TQDK--GPEKSLQAL--DADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGW--YSYRASKA  153 (235)
T ss_pred             cccc--CcccccccC--CHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCc--chhhhhHH
Confidence            3110  00 000000  00001123377777766555554    34445689999875432212222211  45999999


Q ss_pred             HHHHHHHh---------cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCce
Q 046297          235 KAEQYLAD---------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKA  303 (331)
Q Consensus       235 ~~e~~~~~---------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~  303 (331)
                      .++.+.+.         .++++..+.||++.++.....  .    ...+  ...+++.+|+|++++.++..+.  ..|+.
T Consensus       154 a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~--~----~~~~--~~~~~~~~~~a~~~~~l~~~~~~~~~g~~  225 (235)
T PRK09009        154 ALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF--Q----QNVP--KGKLFTPEYVAQCLLGIIANATPAQSGSF  225 (235)
T ss_pred             HHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch--h----hccc--cCCCCCHHHHHHHHHHHHHcCChhhCCcE
Confidence            98877651         378899999999977653211  0    1111  1225789999999999998753  35666


Q ss_pred             EEecc
Q 046297          304 FDLAS  308 (331)
Q Consensus       304 ~~i~~  308 (331)
                      +.+.+
T Consensus       226 ~~~~g  230 (235)
T PRK09009        226 LAYDG  230 (235)
T ss_pred             EeeCC
Confidence            65554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=5.1e-16  Score=137.53  Aligned_cols=215  Identities=13%  Similarity=0.107  Sum_probs=138.5

Q ss_pred             CCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCC---chhhhcC---CCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTE---ESKQKIG---GADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~---~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++++||||++  .||++++++|+++  |++|++..|+.   +..+++.   +...++.+|++|++++.++++      
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            467899999985  9999999999999  99999988873   2222332   235678999999999888774      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                       ++|++|||||.......  ......  +...++-...+++|+.+...+.+++...  +-.+||++||.++..+.   +.
T Consensus        83 g~iD~linnAg~~~~~~~--~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~---~~  155 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQL--DGDYVN--AVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---PN  155 (262)
T ss_pred             CCCCEEEECCccCCcccc--CCcchh--hcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCC---CC
Confidence             48999999997432110  000000  0111111233478888877666665321  12589999998764221   11


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc----hhhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG----IRELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      +  ..|+.+|...+.+.+       ..+++++.|.||++..+...    ............+.  ..+..++|++++++.
T Consensus       156 ~--~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--~r~~~pedva~~~~~  231 (262)
T PRK07984        156 Y--NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--RRTVTIEDVGNSAAF  231 (262)
T ss_pred             c--chhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC--cCCCCHHHHHHHHHH
Confidence            1  359999999887765       36899999999999764211    00111000001111  235688999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.  ..|+.+.+.+
T Consensus       232 L~s~~~~~itG~~i~vdg  249 (262)
T PRK07984        232 LCSDLSAGISGEVVHVDG  249 (262)
T ss_pred             HcCcccccccCcEEEECC
Confidence            987643  4567777765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=6.6e-16  Score=136.42  Aligned_cols=213  Identities=14%  Similarity=0.062  Sum_probs=139.0

Q ss_pred             CCCCeEEEECC--CChhHHHHHHHHHhcCCCCeEEEEecCC--chhhh----cCCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGA--GGRTGQIVYKKLKERSEQYAARGLVRTE--ESKQK----IGGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGa--tG~iG~~l~~~Ll~~~~g~~V~~l~R~~--~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++++||||  ++.||.++++.|+++  |++|++++|+.  +..++    +...+.++++|++|++++.++++     
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            34678999999  899999999999999  99999998764  22232    23357789999999998887764     


Q ss_pred             --CCCEEEEcccCCCCCC--CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMK--PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||......  ..+.+.++++++       ..+++|+.+...+.+++...  .-.++|++|+.+.  .  +
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~-------~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~--~--~  151 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVA-------TALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT--V--A  151 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc--c--c
Confidence              5899999999753210  111122222222       33488988877776665432  1247888876432  1  1


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      .+.+  ..|+.+|...+.+.+       ..|++++.|.||.+..+....    ...........+ .++.+..++|+|++
T Consensus       152 ~~~~--~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p-~~~~~~~p~evA~~  228 (256)
T PRK07889        152 WPAY--DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAP-LGWDVKDPTPVARA  228 (256)
T ss_pred             CCcc--chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCc-cccccCCHHHHHHH
Confidence            1222  348899999876654       368999999999997753210    000000000011 11235789999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.++.  ..|+++.+.+
T Consensus       229 v~~l~s~~~~~~tG~~i~vdg  249 (256)
T PRK07889        229 VVALLSDWFPATTGEIVHVDG  249 (256)
T ss_pred             HHHHhCcccccccceEEEEcC
Confidence            999987643  4677777765

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5e-16  Score=141.19  Aligned_cols=215  Identities=14%  Similarity=0.035  Sum_probs=135.1

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c-----CCCCcEEEccCCCcccHHHHhc--
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I-----GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l-----~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      .++.+++++||||+++||++++++|+++  |++|++++|+.++.++    +     ...+.++++|+.|.++++++++  
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            3455789999999999999999999999  9999999998765432    2     1247789999999998887764  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~  218 (331)
                           ++|++|||||.......   ......+       +..+++|+.+...+.+.+..   .+..+||++||.......
T Consensus        88 ~~~~~~iD~li~nAG~~~~~~~---~~t~~~~-------e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~  157 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTPPER---QTTADGF-------ELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGA  157 (313)
T ss_pred             HHhCCCccEEEECCccccCCcc---ccCcccH-------HHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCC
Confidence                 48999999997532110   1111222       33348899987666655431   234589999998542211


Q ss_pred             CC------CCC-CCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchhh--------hhccCCcccc
Q 046297          219 HP------LNS-LGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIRE--------LLVGKDDELL  274 (331)
Q Consensus       219 ~~------~~~-~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~~--------~~~~~~~~~~  274 (331)
                      ..      ... .....|+.+|...+.+.+         ..++.++.+.||++..+......        ++......+.
T Consensus       158 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  237 (313)
T PRK05854        158 INWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLS  237 (313)
T ss_pred             cCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHh
Confidence            00      001 112569999998775543         13689999999999765321100        0000000000


Q ss_pred             CCcccccCHHHHHHHHHHHhcCccc-CCceE
Q 046297          275 QTETRTIARADVAEVCIQALQFEEA-KFKAF  304 (331)
Q Consensus       275 ~~~~~~i~v~Dva~~~~~~l~~~~~-~~~~~  304 (331)
                      ....-+.++++-|...+.+...+.. .|+.|
T Consensus       238 ~~~~~~~~~~~ga~~~l~~a~~~~~~~g~~~  268 (313)
T PRK05854        238 ARGFLVGTVESAILPALYAATSPDAEGGAFY  268 (313)
T ss_pred             hcccccCCHHHHHHHhhheeeCCCCCCCcEE
Confidence            0011124677888888777766543 34444

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.69  E-value=4.7e-16  Score=123.70  Aligned_cols=196  Identities=19%  Similarity=0.178  Sum_probs=142.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      |.++.++|.||||-.|+.+++++++++.--+|+++.|.+.......+.+..+..|....+++...+++.|+.+++.|...
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTR   95 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTR   95 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceeeeEEechHHHHHHHhhhcCCceEEEeecccc
Confidence            45778999999999999999999999645689999998643333445577888999988889999999999999999766


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQY  239 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~  239 (331)
                      ....         .+..+       .++-+-...+.++|++.|+|+|+++||.++ ++...      -.|.+.|.++|+-
T Consensus        96 gkaG---------adgfy-------kvDhDyvl~~A~~AKe~Gck~fvLvSS~GA-d~sSr------FlY~k~KGEvE~~  152 (238)
T KOG4039|consen   96 GKAG---------ADGFY-------KVDHDYVLQLAQAAKEKGCKTFVLVSSAGA-DPSSR------FLYMKMKGEVERD  152 (238)
T ss_pred             cccc---------cCceE-------eechHHHHHHHHHHHhCCCeEEEEEeccCC-Ccccc------eeeeeccchhhhh
Confidence            5432         12233       777777889999999999999999999987 33332      2377899999998


Q ss_pred             HHhcCCC-EEEEecCcccCCCcchhh--hhccCCccccCCcc---cccCHHHHHHHHHHHhcCcc
Q 046297          240 LADSGIP-YTIIRAGGLQDKEGGIRE--LLVGKDDELLQTET---RTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       240 ~~~~~~~-~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~---~~i~v~Dva~~~~~~l~~~~  298 (331)
                      +.+.+++ ++|+|||.+.+.....+.  ++...........+   -..++.-++.+++..+..+.
T Consensus       153 v~eL~F~~~~i~RPG~ll~~R~esr~geflg~~~~a~l~~~~~R~~s~pv~~~~~amvn~~~~~~  217 (238)
T KOG4039|consen  153 VIELDFKHIIILRPGPLLGERTESRQGEFLGNLTAALLRSRFQRLLSYPVYGDEVAMVNVLNTSG  217 (238)
T ss_pred             hhhccccEEEEecCcceecccccccccchhhheehhhhhhHHHhccCCchhhhhHhHhhccccCC
Confidence            8887774 889999999997654221  11111111111111   22456667777777666554

>PRK06484 short chain dehydrogenase; Validated

Probab=99.69  E-value=7.4e-16  Score=149.76  Aligned_cols=210  Identities=16%  Similarity=0.070  Sum_probs=141.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      +++++||||+++||.+++++|+++  |++|++++|+.++.+++    ..++.++++|++|++++.++++       ++|+
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            578999999999999999999999  99999999987765443    3346789999999998887764       5899


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCC-eEEEEccCCCCCCCCCCCCCC
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAK-QIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk-~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      ||||||........+...+..+++.       .+++|+.++..+++++..    .+-. +||++||..+......     
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~-----  150 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFAR-------LQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK-----  150 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC-----
Confidence            9999996322111111222223333       348899988877776643    3333 8999999876443321     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh-----hccCCccccCCcccccCHHHHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL-----LVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~-----~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      ...|..+|...+.+.+       ..+++++.++||.+..+.......     .......++.  ..+...+|+++++..+
T Consensus       151 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~va~~v~~l  228 (520)
T PRK06484        151 RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPL--GRLGRPEEIAEAVFFL  228 (520)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCC--CCCcCHHHHHHHHHHH
Confidence            2469999999887655       358999999999987654211000     0000001111  1246889999999988


Q ss_pred             hcCcc--cCCceEEec
Q 046297          294 LQFEE--AKFKAFDLA  307 (331)
Q Consensus       294 l~~~~--~~~~~~~i~  307 (331)
                      +....  ..|+.+.+.
T Consensus       229 ~~~~~~~~~G~~~~~~  244 (520)
T PRK06484        229 ASDQASYITGSTLVVD  244 (520)
T ss_pred             hCccccCccCceEEec
Confidence            87532  344444443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.69  E-value=5.6e-16  Score=143.53  Aligned_cols=232  Identities=19%  Similarity=0.164  Sum_probs=159.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhh------hc----------------CCCCcEEEccCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQ------KI----------------GGADDLFIGDIRD  137 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~------~l----------------~~~~~~v~~Dl~d  137 (331)
                      .+++|+|||||||+|+-+++.|++..|. .+++++.|.....+      .+                -..+..+.||+.+
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            4788999999999999999999997543 37888998653221      10                0237888899985


Q ss_pred             c------ccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEc
Q 046297          138 S------NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVG  210 (331)
Q Consensus       138 ~------~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~S  210 (331)
                      +      .+.....+.+|+|||+|+......+                ......+|..|+.++++.|++. ..+-|+++|
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~----------------l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVS  154 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVRFDEP----------------LDVALGINTRGTRNVLQLAKEMVKLKALVHVS  154 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeeccchh----------------hhhhhhhhhHhHHHHHHHHHHhhhhheEEEee
Confidence            4      4455566789999999997554311                1112378999999999999987 578899999


Q ss_pred             cCCCC------CC-----CC--CC----------------------CCCCcchHHHHHHHHHHHHHh--cCCCEEEEecC
Q 046297          211 SMGGT------NL-----NH--PL----------------------NSLGNGNILVWKRKAEQYLAD--SGIPYTIIRAG  253 (331)
Q Consensus       211 S~~~~------~~-----~~--~~----------------------~~~~~~~y~~sK~~~e~~~~~--~~~~~~ilrp~  253 (331)
                      ++++.      .|     ..  +.                      ....++.|.-+|..+|..+.+  .+++.+|+||+
T Consensus       155 TAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPs  234 (467)
T KOG1221|consen  155 TAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPS  234 (467)
T ss_pred             hhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCC
Confidence            99741      01     00  00                      001125688889999999875  58999999999


Q ss_pred             cccCCCc----chhhhhccCCccc--------------cCCcccccCHHHHHHHHHHHhcC-cc----cCCceEEeccCC
Q 046297          254 GLQDKEG----GIRELLVGKDDEL--------------LQTETRTIARADVAEVCIQALQF-EE----AKFKAFDLASKP  310 (331)
Q Consensus       254 ~v~g~~~----~~~~~~~~~~~~~--------------~~~~~~~i~v~Dva~~~~~~l~~-~~----~~~~~~~i~~~~  310 (331)
                      .|.....    ++..-+.|....+              ++...+.|.+|.|+.+++.+.-. ..    ....+||+++. 
T Consensus       235 iI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss-  313 (467)
T KOG1221|consen  235 IITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSS-  313 (467)
T ss_pred             ceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEeccc-
Confidence            8876432    2111111221111              13346789999999999966521 11    12459999973 


Q ss_pred             CCCCCCHHHHHHHHHHhhc
Q 046297          311 EGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       311 ~~~~~t~~e~~~~~~~~~g  329 (331)
                      ..+++++.++.+...+...
T Consensus       314 ~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  314 NDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             ccCcccHHHHHHHHHHhcc
Confidence            3788999999998876543

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.69  E-value=1.6e-16  Score=131.63  Aligned_cols=193  Identities=18%  Similarity=0.095  Sum_probs=146.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      ...++.|+.||.|+++++.....  ++.|..+.|+..+  ++.+...+.++.+|....+-+...+.+...++.++|..+.
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~v--v~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn  130 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNV--VHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGN  130 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhh--ceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccc
Confidence            45899999999999999999999  9999999998653  3445667899999998888788888899999999986443


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYL  240 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  240 (331)
                                         ...+..+|-....+-++++++.|+++|+|+|-.-..     ..++-.+.|..+|+++|..+
T Consensus       131 -------------------~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~-----~~~~i~rGY~~gKR~AE~El  186 (283)
T KOG4288|consen  131 -------------------IILMDRINGTANINAVKAAAKAGVPRFVYISAHDFG-----LPPLIPRGYIEGKREAEAEL  186 (283)
T ss_pred             -------------------hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcC-----CCCccchhhhccchHHHHHH
Confidence                               233447787788888999999999999999964220     11222256999999999654


Q ss_pred             -HhcCCCEEEEecCcccCCCcc-------------hhhhhccC---Ccccc---CCcccccCHHHHHHHHHHHhcCcccC
Q 046297          241 -ADSGIPYTIIRAGGLQDKEGG-------------IRELLVGK---DDELL---QTETRTIARADVAEVCIQALQFEEAK  300 (331)
Q Consensus       241 -~~~~~~~~ilrp~~v~g~~~~-------------~~~~~~~~---~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~~  300 (331)
                       +.++.+-++||||++||...-             .......-   ...++   .--.+++.+++||.+.++++++|+..
T Consensus       187 l~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~  266 (283)
T KOG4288|consen  187 LKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK  266 (283)
T ss_pred             HHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC
Confidence             567899999999999997432             11111111   11111   22367899999999999999999765


Q ss_pred             C
Q 046297          301 F  301 (331)
Q Consensus       301 ~  301 (331)
                      |
T Consensus       267 G  267 (283)
T KOG4288|consen  267 G  267 (283)
T ss_pred             c
Confidence            4

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=5.7e-16  Score=147.84  Aligned_cols=212  Identities=17%  Similarity=0.136  Sum_probs=140.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc--hhhhcCC--CCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE--SKQKIGG--ADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~--~~~~l~~--~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .++++|||||+|+||..+++.|+++  |++|++++|...  ...++..  +..++.+|++|++.+.++++       ++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            4688999999999999999999999  999999998532  2222211  24688999999988877765       589


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC----CeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA----KQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v----k~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +||||+|.....  .+......++       ...+++|+.++.++.+++.....    .+||++||..+.....     .
T Consensus       287 ~vi~~AG~~~~~--~~~~~~~~~~-------~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-----~  352 (450)
T PRK08261        287 IVVHNAGITRDK--TLANMDEARW-------DSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-----G  352 (450)
T ss_pred             EEEECCCcCCCC--ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----C
Confidence            999999974321  0111111222       23347899999999998876433    6899999986543322     1


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      ...|+.+|...+.+.+       ..++.++.+.||.+-.+.........................+|+|++++.++....
T Consensus       353 ~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~  432 (450)
T PRK08261        353 QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPAS  432 (450)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhh
Confidence            2569999997665544       468999999999886542211000000000000111123457899999999886543


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..|+++.+.+
T Consensus       433 ~~itG~~i~v~g  444 (450)
T PRK08261        433 GGVTGNVVRVCG  444 (450)
T ss_pred             cCCCCCEEEECC
Confidence              3578888875

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.68  E-value=5.4e-16  Score=136.93  Aligned_cols=198  Identities=12%  Similarity=0.076  Sum_probs=130.0

Q ss_pred             eEEEECCCChhHHHHHHHHHh----cCCCCeEEEEecCCchhhhc----C-----CCCcEEEccCCCcccHHHHhcC---
Q 046297           84 TVLVTGAGGRTGQIVYKKLKE----RSEQYAARGLVRTEESKQKI----G-----GADDLFIGDIRDSNSIIPAIQG---  147 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~----~~~g~~V~~l~R~~~~~~~l----~-----~~~~~v~~Dl~d~~~~~~~l~~---  147 (331)
                      .++||||+++||.+++++|++    .  |++|+++.|++++.+++    .     ..+.++.+|++|++++.++++.   
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   79 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSP--GSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE   79 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccC--CcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence            589999999999999999997    6  99999999987654432    1     1367889999999988877641   


Q ss_pred             --------CCEEEEcccCCCCCCCCCCCC-CCCCCccccccCCCcceehHHHHHHHHHHH----HHc-C-CCeEEEEccC
Q 046297          148 --------IDALIILTSAVPKMKPDFDPA-KGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAA-G-AKQIVLVGSM  212 (331)
Q Consensus       148 --------~d~Vi~~ag~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~-~-vk~~v~~SS~  212 (331)
                              .|+||||||.........++. ...+++       ..+++|+.+...+.+++    ++. + -++||++||.
T Consensus        80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~-------~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~  152 (256)
T TIGR01500        80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQ-------NYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSL  152 (256)
T ss_pred             ccccCCCceEEEEeCCcccCccccccccCCCHHHHH-------HHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCH
Confidence                    258999999643211101000 111222       33488998876665554    333 2 2589999998


Q ss_pred             CCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC-Ccccc-----C-Ccc
Q 046297          213 GGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK-DDELL-----Q-TET  278 (331)
Q Consensus       213 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~-~~~~~-----~-~~~  278 (331)
                      .+..+...     ...|..+|...+.+.+       ..+++++.+.||++-.+....  ..... .....     . ..-
T Consensus       153 ~~~~~~~~-----~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~~  225 (256)
T TIGR01500       153 CAIQPFKG-----WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ--VREESVDPDMRKGLQELKAKG  225 (256)
T ss_pred             HhCCCCCC-----chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH--HHHhcCChhHHHHHHHHHhcC
Confidence            76433221     1469999999887665       257999999999997663211  11000 00000     0 011


Q ss_pred             cccCHHHHHHHHHHHhcCc
Q 046297          279 RTIARADVAEVCIQALQFE  297 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~  297 (331)
                      .+..++|+|+.++.++.+.
T Consensus       226 ~~~~p~eva~~~~~l~~~~  244 (256)
T TIGR01500       226 KLVDPKVSAQKLLSLLEKD  244 (256)
T ss_pred             CCCCHHHHHHHHHHHHhcC
Confidence            3578999999999998643

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05599 hypothetical protein; Provisional

Probab=99.68  E-value=1.2e-15  Score=133.88  Aligned_cols=196  Identities=15%  Similarity=0.105  Sum_probs=131.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C---C-CCcEEEccCCCcccHHHHhc-------C
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G---G-ADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~---~-~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      |+++||||+++||++++++|. +  |++|++++|++++.+++    .   . .+.++++|+.|++.+.++++       +
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            569999999999999999998 7  89999999987665543    1   1 36788999999998887664       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHH----HHHHHHcC-CCeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ----IDAAKAAG-AKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~l----l~aa~~~~-vk~~v~~SS~~~~~~~~~~~  222 (331)
                      +|++|||+|......       ..  +....+.....++|+.+...+    ++.+++.+ -.+||++||..+..+.... 
T Consensus        78 id~lv~nag~~~~~~-------~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~-  147 (246)
T PRK05599         78 ISLAVVAFGILGDQE-------RA--ETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRAN-  147 (246)
T ss_pred             CCEEEEecCcCCCch-------hh--hcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCC-
Confidence            899999999743210       00  000001112235666665544    44455443 3589999998764432211 


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                          ..|..+|...+.+.+       ..+++++.+.||++..+...      +..   +. .. ....+|+|++++.++.
T Consensus       148 ----~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~------~~~---~~-~~-~~~pe~~a~~~~~~~~  212 (246)
T PRK05599        148 ----YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT------GMK---PA-PM-SVYPRDVAAAVVSAIT  212 (246)
T ss_pred             ----cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc------CCC---CC-CC-CCCHHHHHHHHHHHHh
Confidence                358899988776654       36899999999999776321      100   00 11 2578999999999998


Q ss_pred             CcccCCceEEec
Q 046297          296 FEEAKFKAFDLA  307 (331)
Q Consensus       296 ~~~~~~~~~~i~  307 (331)
                      .+.. +..+.+.
T Consensus       213 ~~~~-~~~~~~~  223 (246)
T PRK05599        213 SSKR-STTLWIP  223 (246)
T ss_pred             cCCC-CceEEeC
Confidence            7643 3345554

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.68  E-value=1.4e-15  Score=141.31  Aligned_cols=182  Identities=15%  Similarity=0.094  Sum_probs=126.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh-c---CCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-I---GGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-l---~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ..+++|+||||+|+||++++++|+++  |++|++++|++++... .   ...+..+.+|++|++.+.+.+.++|++||||
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA  253 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH  253 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence            45789999999999999999999999  9999999998765432 1   1235678999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCC---C-eEEEEccCCCCCCCCCCCCCCcc
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGA---K-QIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v---k-~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |.....     +.+.+++       ...+++|+.++.++++++.    +.+.   + .+|.+|++. .   .+  + ...
T Consensus       254 Gi~~~~-----~~s~e~~-------~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~---~~--~-~~~  314 (406)
T PRK07424        254 GINVHG-----ERTPEAI-------NKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V---NP--A-FSP  314 (406)
T ss_pred             CcCCCC-----CCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c---cC--C-Cch
Confidence            964221     1111222       3344899999888888764    3321   2 345555432 1   11  1 113


Q ss_pred             hHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          228 NILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       228 ~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      .|.++|+..+.+..    +.+..+..+.||.+..+..                ....++.+|+|+.++.+++.++
T Consensus       315 ~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~----------------~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        315 LYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLN----------------PIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCC----------------cCCCCCHHHHHHHHHHHHHCCC
Confidence            59999999877532    2456666777766533210                1124789999999999998764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=1.4e-15  Score=131.90  Aligned_cols=194  Identities=18%  Similarity=0.173  Sum_probs=140.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC--CCCcEEEccCCCcccHHHHhc-------C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG--GADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~--~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      .+..||||||++++|+.++.+|+++  |.++++.+.+.+...+    ..  +++....||++|.+++.+..+       .
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            3678999999999999999999999  9999999988754332    22  357889999999998877664       5


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|++|||||......-  -..+.+..       .+++++|+.+    +++++..+.+.+-.++|.++|..+.-.....  
T Consensus       115 V~ILVNNAGI~~~~~l--l~~~d~ei-------~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl--  183 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKL--LDCSDEEI-------QKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL--  183 (300)
T ss_pred             ceEEEeccccccCCCc--cCCCHHHH-------HHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc--
Confidence            8999999998776431  11111222       3344888777    5667788888888899999999875433322  


Q ss_pred             CCcchHHHHHHHHHHHHH----------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA----------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~----------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                         ..|..+|..+..+.+          ..+++++.+.|+.+-...      ..+ ..+. ..-.+.+..+.||+-++.+
T Consensus       184 ---~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm------f~~-~~~~-~~l~P~L~p~~va~~Iv~a  252 (300)
T KOG1201|consen  184 ---ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM------FDG-ATPF-PTLAPLLEPEYVAKRIVEA  252 (300)
T ss_pred             ---hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc------cCC-CCCC-ccccCCCCHHHHHHHHHHH
Confidence               458899988765543          257999999999886332      222 1111 2235678999999999999


Q ss_pred             hcCcc
Q 046297          294 LQFEE  298 (331)
Q Consensus       294 l~~~~  298 (331)
                      +..+.
T Consensus       253 i~~n~  257 (300)
T KOG1201|consen  253 ILTNQ  257 (300)
T ss_pred             HHcCC
Confidence            87654

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.1e-15  Score=136.45  Aligned_cols=206  Identities=10%  Similarity=-0.026  Sum_probs=129.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc----------hhhh----c---CCCCcEEEccCCCcccHH
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE----------SKQK----I---GGADDLFIGDIRDSNSII  142 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~----------~~~~----l---~~~~~~v~~Dl~d~~~~~  142 (331)
                      +.+++++||||+++||+++++.|++.  |++|++++|+.+          +.+.    +   ...+.++++|+.|++++.
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            45689999999999999999999999  999999999742          2221    1   123678899999999888


Q ss_pred             HHhc-------CCCEEEEcc-cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEc
Q 046297          143 PAIQ-------GIDALIILT-SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVG  210 (331)
Q Consensus       143 ~~l~-------~~d~Vi~~a-g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~S  210 (331)
                      ++++       ++|++|||+ |......  +.. ..  .+...++....+++|+.+...+++++    ++.+-.+||++|
T Consensus        84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~--~~~-~~--~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~is  158 (305)
T PRK08303         84 ALVERIDREQGRLDILVNDIWGGEKLFE--WGK-PV--WEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEIT  158 (305)
T ss_pred             HHHHHHHHHcCCccEEEECCcccccccc--cCC-ch--hhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEEC
Confidence            7764       589999999 6421000  000 00  01111111233477887766655554    334346899999


Q ss_pred             cCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhc--cC-----CccccCC
Q 046297          211 SMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLV--GK-----DDELLQT  276 (331)
Q Consensus       211 S~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~--~~-----~~~~~~~  276 (331)
                      |..+.....+..  ....|..+|.....+.+       ..|++++.|.||++..+...  ....  ..     ....+. 
T Consensus       159 S~~~~~~~~~~~--~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~p~-  233 (305)
T PRK08303        159 DGTAEYNATHYR--LSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML--DAFGVTEENWRDALAKEPH-  233 (305)
T ss_pred             CccccccCcCCC--CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH--HhhccCccchhhhhccccc-
Confidence            865422111111  11359999999887654       36899999999998665311  1100  00     000110 


Q ss_pred             cccccCHHHHHHHHHHHhcCc
Q 046297          277 ETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       277 ~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      ...+...+|+|++++.++.++
T Consensus       234 ~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        234 FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             cccCCCHHHHHHHHHHHHcCc
Confidence            112347899999999998765

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.64  E-value=5.7e-15  Score=130.60  Aligned_cols=213  Identities=16%  Similarity=0.082  Sum_probs=145.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC----------CCCcEEEccCCCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG----------GADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~----------~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ..++.++||||+..||+.+|++|.+.  |.+|++.+|++++.++..          ..+..+.+|+++.+++.++++   
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~--Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKA--GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            34788999999999999999999999  999999999987654421          237789999998887776653   


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH-HHHHHHHHH----HcCCCeEEEEccCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG-QKNQIDAAK----AAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~-~~~ll~aa~----~~~vk~~v~~SS~~~~~  216 (331)
                           ++|++|||||...... .....+.++++       ..+++|+.| ...+..++.    +.+-..++++||..+..
T Consensus        84 ~~~~GkidiLvnnag~~~~~~-~~~~~s~e~~d-------~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~  155 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTG-SILDLSEEVFD-------KIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG  155 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCC-ChhhCCHHHHH-------HHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc
Confidence                 5899999999866543 11222333333       344889885 555555543    33556899999887654


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-------hhhhcc--CCccccCCcccc
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-------RELLVG--KDDELLQTETRT  280 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-------~~~~~~--~~~~~~~~~~~~  280 (331)
                      ...+..    ..|..+|...+++.+       .+|+++.++-||.+..+....       ......  ....++-  -..
T Consensus       156 ~~~~~~----~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~--gr~  229 (270)
T KOG0725|consen  156 PGPGSG----VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPL--GRV  229 (270)
T ss_pred             CCCCCc----ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccccc--CCc
Confidence            433321    248899999998876       479999999999998876110       011110  1111111  123


Q ss_pred             cCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          281 IARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ...+|++..+..+...+.  ..|+...+.+
T Consensus       230 g~~~eva~~~~fla~~~asyitG~~i~vdg  259 (270)
T KOG0725|consen  230 GTPEEVAEAAAFLASDDASYITGQTIIVDG  259 (270)
T ss_pred             cCHHHHHHhHHhhcCcccccccCCEEEEeC
Confidence            578999999988877653  3455665554

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.63  E-value=5.5e-15  Score=128.14  Aligned_cols=185  Identities=11%  Similarity=-0.079  Sum_probs=124.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ..++++||||++.||++++++|+++  |++|+++.|++++.+++       ...+..+.+|+.|++++.++++       
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARL--GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999  99999999988765432       2346678899999998876653       


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHH----HHHHHHcC-CCeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ----IDAAKAAG-AKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~l----l~aa~~~~-vk~~v~~SS~~~~~~~~~  220 (331)
                       ++|++|||+|...... .++..+..+...       ..++|+.+...+    ++.+++.+ -..+|++||..+. +  .
T Consensus        82 ~~iD~li~nag~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-~--~  150 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPS-LFDEQPSESFIQ-------QLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-Q--D  150 (227)
T ss_pred             CCCCEEEECCccCCCCC-ccccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-C--C
Confidence             5899999998532211 111111111111       224565554444    44454443 3589999986542 1  1


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCH-HHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIAR-ADVAEVCIQ  292 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~~~~~  292 (331)
                           ...|..+|...+.+.+       ..++++..|.||++..+......              .|..+ +|++.+...
T Consensus       151 -----~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~~~--------------~~~~~~~~~~~~~~~  211 (227)
T PRK08862        151 -----LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELDAV--------------HWAEIQDELIRNTEY  211 (227)
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccCHH--------------HHHHHHHHHHhheeE
Confidence                 1358899999887665       36899999999999877421100              11111 788888877


Q ss_pred             HhcCc
Q 046297          293 ALQFE  297 (331)
Q Consensus       293 ~l~~~  297 (331)
                      ++.++
T Consensus       212 l~~~~  216 (227)
T PRK08862        212 IVANE  216 (227)
T ss_pred             EEecc
Confidence            77644

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.63  E-value=1.3e-14  Score=130.54  Aligned_cols=213  Identities=9%  Similarity=0.023  Sum_probs=134.4

Q ss_pred             CCCCeEEEECC--CChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------------C-----CCCcEEEccC--
Q 046297           80 MAKSTVLVTGA--GGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------------G-----GADDLFIGDI--  135 (331)
Q Consensus        80 ~~~~~VlVtGa--tG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------------~-----~~~~~v~~Dl--  135 (331)
                      ..+|++|||||  +.+||.++++.|.++  |++|++ .|+.++++++               .     .....+.+|+  
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            56889999999  899999999999999  999988 6654332211               1     1135778898  


Q ss_pred             CCcc------------------cHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH
Q 046297          136 RDSN------------------SIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG  190 (331)
Q Consensus       136 ~d~~------------------~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~  190 (331)
                      .+++                  ++.++++       ++|++|||||........+...+.++++.       .+++|+.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~-------~~~vN~~~  156 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLA-------AISASSYS  156 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHH-------HHHHHhHH
Confidence            4333                  4555543       58999999975322111122223333333       34899998


Q ss_pred             HHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------h-cCCCEEEEecCcccCCCc
Q 046297          191 QKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------D-SGIPYTIIRAGGLQDKEG  260 (331)
Q Consensus       191 ~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~~~~~ilrp~~v~g~~~  260 (331)
                      ...+++++...  .-.++|++||..+.... |.  +. ..|..+|...+.+.+       . .+++++.|.||++..+..
T Consensus       157 ~~~l~~~~~p~m~~~G~II~isS~a~~~~~-p~--~~-~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~  232 (303)
T PLN02730        157 FVSLLQHFGPIMNPGGASISLTYIASERII-PG--YG-GGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAA  232 (303)
T ss_pred             HHHHHHHHHHHHhcCCEEEEEechhhcCCC-CC--Cc-hhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchh
Confidence            77776665432  11589999998654322 21  11 259999999887664       2 479999999999977642


Q ss_pred             chh----hhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          261 GIR----ELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       261 ~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ...    ..........+-  ..+...+|++.+++.++....  ..|+.+.+.+
T Consensus       233 ~~~~~~~~~~~~~~~~~pl--~r~~~peevA~~~~fLaS~~a~~itG~~l~vdG  284 (303)
T PLN02730        233 KAIGFIDDMIEYSYANAPL--QKELTADEVGNAAAFLASPLASAITGATIYVDN  284 (303)
T ss_pred             hcccccHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            110    000000001111  234678999999999987543  4567777665

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.62  E-value=3.7e-15  Score=123.22  Aligned_cols=158  Identities=20%  Similarity=0.160  Sum_probs=115.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh-------c---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK-------I---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~-------l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++++|+||+|+||.+++++|+++  |+ .|+++.|+++....       +   ..++.++.+|+.+++.+.++++     
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAER--GARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999998  86 68888887543221       1   2246788999999888877764     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                        .+|.|||++|......  .......++       ....++|+.+...+++++++.+.+++|++||..+......    
T Consensus        79 ~~~id~li~~ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~----  145 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGL--LANLTPERF-------AAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPG----  145 (180)
T ss_pred             cCCeeEEEEccccCCccc--cccCCHHHH-------HHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCC----
Confidence              3699999999643211  111111222       2334889999999999998888889999999865333221    


Q ss_pred             CcchHHHHHHHHHHHHH---hcCCCEEEEecCccc
Q 046297          225 GNGNILVWKRKAEQYLA---DSGIPYTIIRAGGLQ  256 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v~  256 (331)
                       ...|..+|...+.+.+   ..+++++.+.||.+-
T Consensus       146 -~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      146 -QANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             -chhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence             2458899999887764   578999999999764

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.61  E-value=7.2e-15  Score=123.09  Aligned_cols=225  Identities=19%  Similarity=0.258  Sum_probs=158.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-----hhhc--------CCCCcEEEccCCCcccHHHHhc--
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-----KQKI--------GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~l--------~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      .+..||||-||.=|++|++-|+.+  ||+|.++.|..+.     .+++        ........+|++|...+.+++.  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            456899999999999999999999  9999999997543     3332        1237788999999999999997  


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC---eEEEEccCC--CCCCCCC-
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK---QIVLVGSMG--GTNLNHP-  220 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk---~~v~~SS~~--~~~~~~~-  220 (331)
                      +.+-|+|+|+....             ...|+-.+++.+++..|+.+++++.+..+..   ||...|+..  +--...| 
T Consensus       106 kPtEiYnLaAQSHV-------------kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQ  172 (376)
T KOG1372|consen  106 KPTEVYNLAAQSHV-------------KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQ  172 (376)
T ss_pred             Cchhhhhhhhhcce-------------EEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCc
Confidence            57999999997444             4456666777799999999999999987632   777777762  2111111 


Q ss_pred             ---CCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCC---Ccc-----------hhhhhccCCcccc----C
Q 046297          221 ---LNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDK---EGG-----------IRELLVGKDDELL----Q  275 (331)
Q Consensus       221 ---~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~---~~~-----------~~~~~~~~~~~~~----~  275 (331)
                         .+.++.++|+++|..+-++.-    .+++=   -+-|.++..   ..+           ...+..|+...+.    +
T Consensus       173 sE~TPFyPRSPYa~aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~  249 (376)
T KOG1372|consen  173 SETTPFYPRSPYAAAKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLS  249 (376)
T ss_pred             ccCCCCCCCChhHHhhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchh
Confidence               223455889999987654432    23321   122333322   111           1222234433332    4


Q ss_pred             CcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          276 TETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       276 ~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ..++|-|..|-+++++.+|+++..  ..|.|..   |+..++.|++++--...|
T Consensus       250 a~RDWGhA~dYVEAMW~mLQ~d~P--dDfViAT---ge~hsVrEF~~~aF~~ig  298 (376)
T KOG1372|consen  250 ALRDWGHAGDYVEAMWLMLQQDSP--DDFVIAT---GEQHSVREFCNLAFAEIG  298 (376)
T ss_pred             hhcccchhHHHHHHHHHHHhcCCC--CceEEec---CCcccHHHHHHHHHHhhC
Confidence            558999999999999999988754  4699998   899999999987665555

>PLN00015 protochlorophyllide reductase

Probab=99.60  E-value=3.5e-14  Score=128.86  Aligned_cols=209  Identities=14%  Similarity=0.106  Sum_probs=130.0

Q ss_pred             EEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           86 LVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        86 lVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      +||||+++||.+++++|+++  | ++|++..|+.++...+       ...+.++++|+.|.+++.++++       ++|+
T Consensus         1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            69999999999999999999  9 9999999987654332       1246778999999998877764       5899


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHcC--CCeEEEEccCCCCCCC-----C
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAAG--AKQIVLVGSMGGTNLN-----H  219 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~--vk~~v~~SS~~~~~~~-----~  219 (331)
                      +|||||....... ......+++       ...+++|+.+...++    +.+++.+  .++||++||..+....     .
T Consensus        79 lInnAG~~~~~~~-~~~~~~~~~-------~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~  150 (308)
T PLN00015         79 LVCNAAVYLPTAK-EPTFTADGF-------ELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVP  150 (308)
T ss_pred             EEECCCcCCCCCC-cCCCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCC
Confidence            9999997432110 001111222       334488998866654    4455444  4699999998653110     0


Q ss_pred             C----------------C--------CC-CCcchHHHHHHHHHHH----HHh----cCCCEEEEecCcccC-CCcch-hh
Q 046297          220 P----------------L--------NS-LGNGNILVWKRKAEQY----LAD----SGIPYTIIRAGGLQD-KEGGI-RE  264 (331)
Q Consensus       220 ~----------------~--------~~-~~~~~y~~sK~~~e~~----~~~----~~~~~~ilrp~~v~g-~~~~~-~~  264 (331)
                      +                .        .. .....|..+|.....+    .++    .++.++.++||++.+ +.... ..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~  230 (308)
T PLN00015        151 PKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIP  230 (308)
T ss_pred             CccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccH
Confidence            0                0        00 1125699999984433    222    479999999999953 32110 00


Q ss_pred             hhc---cCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEe
Q 046297          265 LLV---GKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDL  306 (331)
Q Consensus       265 ~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i  306 (331)
                      ...   ......+.  ..+.++++.|+.++.++.+..  ..|..|..
T Consensus       231 ~~~~~~~~~~~~~~--~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~  275 (308)
T PLN00015        231 LFRLLFPPFQKYIT--KGYVSEEEAGKRLAQVVSDPSLTKSGVYWSW  275 (308)
T ss_pred             HHHHHHHHHHHHHh--cccccHHHhhhhhhhhccccccCCCcccccc
Confidence            000   00000011  124688999999999886543  34555543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.60  E-value=6.7e-15  Score=120.19  Aligned_cols=164  Identities=14%  Similarity=0.063  Sum_probs=123.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      ++.+||||||+.+||..++++|++.  |-+|+++.|+++++++..   +.+..+.+|+.|.+..++.++       ..++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~el--gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLEL--GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHh--CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            3678999999999999999999999  999999999999887754   347888999999987776664       4799


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      +|||||+.....       +..++..+++.....++|+.+..++..+..    +..-.-+|.+||.-+..+....+.   
T Consensus        82 liNNAGIqr~~d-------lt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~Pv---  151 (245)
T COG3967          82 LINNAGIQRNED-------LTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPV---  151 (245)
T ss_pred             eeecccccchhh-------ccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccccc---
Confidence            999999866532       223444454445555788888777666554    334447999999765544433222   


Q ss_pred             chHHHHHHHHHHH-------HHhcCCCEEEEecCcccCC
Q 046297          227 GNILVWKRKAEQY-------LADSGIPYTIIRAGGLQDK  258 (331)
Q Consensus       227 ~~y~~sK~~~e~~-------~~~~~~~~~ilrp~~v~g~  258 (331)
                        |.++|.....|       ++..+++++-+-|+.|..+
T Consensus       152 --YcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         152 --YCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             --chhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence              77889887644       3456899999999988775

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.59  E-value=4.2e-14  Score=114.49  Aligned_cols=209  Identities=16%  Similarity=0.118  Sum_probs=143.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCC--CCcEEEccCCCcccHHHHhc-------CC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGG--ADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~--~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      .+..+||||+..||+++++.|.+.  |++|.+.+++.+..++    +..  .-..+.+|++++++++..++       .+
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~--Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKK--GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhc--CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            577899999999999999999999  9999999998765443    333  46678999999998887665       58


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----CCC--eEEEEccCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----GAK--QIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~vk--~~v~~SS~~~~~~~~~~~  222 (331)
                      ++++||||+.....  +-.++.++|+...       .+|+.|+..+.+++.+.    +..  .||.+||.-+...+.   
T Consensus        92 svlVncAGItrD~~--Llrmkq~qwd~vi-------~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~---  159 (256)
T KOG1200|consen   92 SVLVNCAGITRDGL--LLRMKQEQWDSVI-------AVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF---  159 (256)
T ss_pred             cEEEEcCccccccc--eeeccHHHHHHHH-------HhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc---
Confidence            99999999865421  1133334444444       88999988777776543    222  899999986644433   


Q ss_pred             CCCcchHHHHHHH-------HHHHHHhcCCCEEEEecCcccCCCcc--hhhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          223 SLGNGNILVWKRK-------AEQYLADSGIPYTIIRAGGLQDKEGG--IRELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       223 ~~~~~~y~~sK~~-------~e~~~~~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                        ++..|+++|.-       +.+.+...++++.++.||+|-.|...  ....+......+|.+  ..-..+|+|..++.+
T Consensus       160 --GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmg--r~G~~EevA~~V~fL  235 (256)
T KOG1200|consen  160 --GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMG--RLGEAEEVANLVLFL  235 (256)
T ss_pred             --cchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCcc--ccCCHHHHHHHHHHH
Confidence              33558887643       23334457899999999999887542  111111111122222  234679999999887


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      ..+..  ..|..+.+.+
T Consensus       236 AS~~ssYiTG~t~evtG  252 (256)
T KOG1200|consen  236 ASDASSYITGTTLEVTG  252 (256)
T ss_pred             hccccccccceeEEEec
Confidence            75443  3567788876

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.59  E-value=2.3e-14  Score=130.38  Aligned_cols=214  Identities=16%  Similarity=0.124  Sum_probs=132.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhc----C---CCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKI----G---GADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l----~---~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++++||||+++||.++++.|+++  | ++|++++|+.++.+++    .   ..+.++.+|++|.+++.++++       
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            568999999999999999999999  9 9999999987655432    1   236788999999988877663       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcC--CCeEEEEccCCCCCCC--
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAG--AKQIVLVGSMGGTNLN--  218 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~--vk~~v~~SS~~~~~~~--  218 (331)
                      ++|++|||||.......        .++...++....+++|+.+...++++    +++.+  ..+||++||..+....  
T Consensus        81 ~iD~lI~nAG~~~~~~~--------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~  152 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAK--------EPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLA  152 (314)
T ss_pred             CCCEEEECCCccccCcc--------ccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCC
Confidence            58999999996432110        01111112233348898886666544    44443  4699999998542110  


Q ss_pred             ----CC---------------------CCC-CCcchHHHHHHHHHHHHH----h----cCCCEEEEecCccc-CCCcc-h
Q 046297          219 ----HP---------------------LNS-LGNGNILVWKRKAEQYLA----D----SGIPYTIIRAGGLQ-DKEGG-I  262 (331)
Q Consensus       219 ----~~---------------------~~~-~~~~~y~~sK~~~e~~~~----~----~~~~~~ilrp~~v~-g~~~~-~  262 (331)
                          .+                     ..+ .....|..+|.....+.+    +    .++.++.++||++. .+... .
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~  232 (314)
T TIGR01289       153 GNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREH  232 (314)
T ss_pred             CcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccc
Confidence                00                     000 112469999998544322    2    47899999999985 33211 0


Q ss_pred             hhhhccCCccc-cCCcccccCHHHHHHHHHHHhcCcc--cCCceEE
Q 046297          263 RELLVGKDDEL-LQTETRTIARADVAEVCIQALQFEE--AKFKAFD  305 (331)
Q Consensus       263 ~~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~  305 (331)
                      ..........+ ......+.++++.|+.++.++..+.  ..|..|.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       233 VPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             cHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            00000000000 0000124788999999999887643  2344443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.58  E-value=5.6e-14  Score=116.68  Aligned_cols=201  Identities=17%  Similarity=0.164  Sum_probs=133.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCch-hhhc------CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEES-KQKI------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~-~~~l------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..+.|+||||+.+||..|+++|++.. |.++++- .|++++ .+++      ..++++++.|+++.+.+.+.++      
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~-~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDK-GIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCC-CcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            35669999999999999999999864 7776654 455665 2221      4569999999999888877764      


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHH----HHHHHHHHHcCCC-----------eEEE
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQ----KNQIDAAKAAGAK-----------QIVL  208 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~----~~ll~aa~~~~vk-----------~~v~  208 (331)
                         ++|++|+|||.......     ....+...|   ...+++|..+.    +.++...+++..+           .+|+
T Consensus        81 g~~GlnlLinNaGi~~~y~~-----~~~~~r~~~---~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIin  152 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNT-----VLKPSRAVL---LEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIIN  152 (249)
T ss_pred             ccCCceEEEeccceeeeccc-----ccCCcHHHH---HHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEE
Confidence               68999999998654322     111111111   12237776664    4444444544333           7898


Q ss_pred             EccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCccccc
Q 046297          209 VGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTI  281 (331)
Q Consensus       209 ~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i  281 (331)
                      +||..+-  .....+.+...|..+|.+.-.+.+       +.++-++.+.||||....+.               .-..+
T Consensus       153 isS~~~s--~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg---------------~~a~l  215 (249)
T KOG1611|consen  153 ISSSAGS--IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG---------------KKAAL  215 (249)
T ss_pred             eeccccc--cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC---------------CCccc
Confidence            9998654  222233334679999999877766       35677889999999877643               22346


Q ss_pred             CHHHHHHHHHHHhcC--cccCCceEEec
Q 046297          282 ARADVAEVCIQALQF--EEAKFKAFDLA  307 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~--~~~~~~~~~i~  307 (331)
                      ++++-+.-++..+.+  +++.|.-||-.
T Consensus       216 tveeSts~l~~~i~kL~~~hnG~ffn~d  243 (249)
T KOG1611|consen  216 TVEESTSKLLASINKLKNEHNGGFFNRD  243 (249)
T ss_pred             chhhhHHHHHHHHHhcCcccCcceEccC
Confidence            677777777766653  45667767665

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.54  E-value=9e-15  Score=127.96  Aligned_cols=204  Identities=15%  Similarity=0.109  Sum_probs=136.5

Q ss_pred             CCC--ChhHHHHHHHHHhcCCCCeEEEEecCCchh----hhcC--CCCcEEEccCCCcccHHHHh--------cCCCEEE
Q 046297           89 GAG--GRTGQIVYKKLKERSEQYAARGLVRTEESK----QKIG--GADDLFIGDIRDSNSIIPAI--------QGIDALI  152 (331)
Q Consensus        89 Gat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~----~~l~--~~~~~v~~Dl~d~~~~~~~l--------~~~d~Vi  152 (331)
                      |++  +.||++++++|+++  |++|++++|+.++.    +++.  ...+++++|++|++++.+++        .++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~--Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEE--GANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHT--TEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            667  99999999999999  99999999998763    2222  23567999999999888775        3689999


Q ss_pred             EcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||++.....  ...+...       ..++-...+++|+.+...+++++.+.  .-..+|++||........   .+  ..
T Consensus        79 ~~a~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~---~~--~~  146 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDL-------SEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMP---GY--SA  146 (241)
T ss_dssp             EEEESCTGGGTSSSGGGS-------HHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBST---TT--HH
T ss_pred             ecccccccccCCCChHhC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCc---cc--hh
Confidence            999975431  1111111       11122333477777777766665332  125799999887544321   11  46


Q ss_pred             HHHHHHHHHHHHH-------h-cCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHHHHHhcC
Q 046297          229 ILVWKRKAEQYLA-------D-SGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~-~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                      |..+|...+.+.+       . +|+++++|.||++..+....    ...........|-  ..+...+|||++++.++.+
T Consensus       147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl--~r~~~~~evA~~v~fL~s~  224 (241)
T PF13561_consen  147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL--GRLGTPEEVANAVLFLASD  224 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT--SSHBEHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc--CCCcCHHHHHHHHHHHhCc
Confidence            9999999887765       4 79999999999998764221    1111111111121  1236899999999999987


Q ss_pred             cc--cCCceEEecc
Q 046297          297 EE--AKFKAFDLAS  308 (331)
Q Consensus       297 ~~--~~~~~~~i~~  308 (331)
                      ..  ..|+++.+.+
T Consensus       225 ~a~~itG~~i~vDG  238 (241)
T PF13561_consen  225 AASYITGQVIPVDG  238 (241)
T ss_dssp             GGTTGTSEEEEEST
T ss_pred             cccCccCCeEEECC
Confidence            63  5688888876

...

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.54  E-value=1.6e-14  Score=118.85  Aligned_cols=144  Identities=23%  Similarity=0.210  Sum_probs=105.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC--Cchhhh----c---CCCCcEEEccCCCcccHHHHhc-------
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT--EESKQK----I---GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~--~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      |+|+||||++.||..++++|++++ +++|+++.|+  .+..++    +   ..++.++++|++++++++++++       
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g-~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRG-ARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcC-ceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence            479999999999999999999993 4578888888  333332    2   2458899999999998888875       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      .+|++|||+|.....  ..+...       .++-...+++|+.+...+.+++...+-++||++||..+..+...     .
T Consensus        80 ~ld~li~~ag~~~~~--~~~~~~-------~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----~  145 (167)
T PF00106_consen   80 PLDILINNAGIFSDG--SLDDLS-------EEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPG-----M  145 (167)
T ss_dssp             SESEEEEECSCTTSB--SGGGSH-------HHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTT-----B
T ss_pred             ccccccccccccccc--cccccc-------chhhhhccccccceeeeeeehheeccccceEEecchhhccCCCC-----C
Confidence            589999999986521  111111       11123344788888888888887766679999999987543322     2


Q ss_pred             chHHHHHHHHHHHHH
Q 046297          227 GNILVWKRKAEQYLA  241 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~  241 (331)
                      ..|..+|...+.+.+
T Consensus       146 ~~Y~askaal~~~~~  160 (167)
T PF00106_consen  146 SAYSASKAALRGLTQ  160 (167)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHH
Confidence            569999999988776

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.53  E-value=4.5e-14  Score=117.24  Aligned_cols=200  Identities=19%  Similarity=0.173  Sum_probs=141.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh---cC-----CCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK---IG-----GADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~---l~-----~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +++++++|||.|+||..+.++|+++  |..+.++.-+.++.+.   |+     ..+.|+++|+.+..+++++++      
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~k--gik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEK--GIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHc--CchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            4788999999999999999999999  9988887777665443   22     237899999999988888886      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHc-C--CCeEEEEccCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAA-G--AKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~-~--vk~~v~~SS~~~~~~~  218 (331)
                       .+|++||+||....          .+++...       .+|+.|    +...++.+.+. |  -.-+|.+||..+.++-
T Consensus        82 g~iDIlINgAGi~~d----------kd~e~Ti-------~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~  144 (261)
T KOG4169|consen   82 GTIDILINGAGILDD----------KDWERTI-------NVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM  144 (261)
T ss_pred             CceEEEEcccccccc----------hhHHHhh-------ccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc
Confidence             58999999997542          2344443       777655    56677777543 2  2369999999987766


Q ss_pred             CCCCCCCcchHHHHHHHH---------HHHHHhcCCCEEEEecCcccCCCcchhhhhc--cCCcccc----C--Cccccc
Q 046297          219 HPLNSLGNGNILVWKRKA---------EQYLADSGIPYTIIRAGGLQDKEGGIRELLV--GKDDELL----Q--TETRTI  281 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~---------e~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~--~~~~~~~----~--~~~~~i  281 (331)
                      .-++.     |+++|+.+         +.+.++.|+++..++||.+-....   .-+.  +......    +  ...+..
T Consensus       145 p~~pV-----Y~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~---~~~~~~~~~~e~~~~~~~~l~~~~~q  216 (261)
T KOG4169|consen  145 PVFPV-----YAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLA---ENIDASGGYLEYSDSIKEALERAPKQ  216 (261)
T ss_pred             ccchh-----hhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHH---HHHHhcCCcccccHHHHHHHHHcccC
Confidence            54443     77887653         456678899999999998754311   1111  1000000    0  012345


Q ss_pred             CHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          282 ARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      +..+++..++.+++.+ ..|.+|-+..
T Consensus       217 ~~~~~a~~~v~aiE~~-~NGaiw~v~~  242 (261)
T KOG4169|consen  217 SPACCAINIVNAIEYP-KNGAIWKVDS  242 (261)
T ss_pred             CHHHHHHHHHHHHhhc-cCCcEEEEec
Confidence            7899999999999986 4577888876

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.51  E-value=3.4e-13  Score=117.68  Aligned_cols=165  Identities=22%  Similarity=0.226  Sum_probs=123.0

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-----CCCCcEEEccCCCcccHHHHhc-------
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-----GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-----~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +...+.|+|||+-.+.|..+|++|.++  |+.|.+-.-+++..+.+     .++...++.|++++++++++.+       
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~--Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKK--GFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhc--CCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            334678999999999999999999999  99999877766554443     3457888999999999998875       


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        +...||||||+....+    +.+|.    ..++.+.++++|+.|+.++..+.    +++. .|+|++||..+..+...
T Consensus       104 ~~gLwglVNNAGi~~~~g----~~ewl----~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~  174 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLG----PDEWL----TVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPA  174 (322)
T ss_pred             cccceeEEeccccccccC----ccccc----cHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcc
Confidence              5789999999765543    22222    22344567799999976665554    5543 59999999988443332


Q ss_pred             CCCCCcchHHHHHHHHHHHH-------HhcCCCEEEEecCcccCCC
Q 046297          221 LNSLGNGNILVWKRKAEQYL-------ADSGIPYTIIRAGGLQDKE  259 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~-------~~~~~~~~ilrp~~v~g~~  259 (331)
                      .     .+|..+|..+|.+.       +.+|+++.+|-||.+-.+-
T Consensus       175 ~-----g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l  215 (322)
T KOG1610|consen  175 L-----GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNL  215 (322)
T ss_pred             c-----ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcccccc
Confidence            2     45888898888654       3589999999999655443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.50  E-value=4.5e-13  Score=120.41  Aligned_cols=201  Identities=17%  Similarity=0.108  Sum_probs=133.1

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-----CCCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-----GADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-----~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +...++++||||+.+||.+++++|.++  |.+|+...|+.++.++.    .     ..+.++++|+.|.+++++..+   
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~--Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALR--GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            344678999999999999999999999  99999999997554332    1     237789999999999887764   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHH----HHHHHHHHcCCCeEEEEccCCC-C--
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQK----NQIDAAKAAGAKQIVLVGSMGG-T--  215 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~vk~~v~~SS~~~-~--  215 (331)
                          ..|++|+|||......           ....+..+..+.+|..|..    .+++.++...-.|||++||... .  
T Consensus       110 ~~~~~ldvLInNAGV~~~~~-----------~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~  178 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPPF-----------SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKI  178 (314)
T ss_pred             hcCCCccEEEeCcccccCCc-----------ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCcc
Confidence                5799999999865432           1111233445588988854    4555666655479999999764 1  


Q ss_pred             CC---CCCCCC-CCc-chHHHHHHHHHH----HHHhc--CCCEEEEecCcccCCC-cc---hhhhhccCCccccCCcccc
Q 046297          216 NL---NHPLNS-LGN-GNILVWKRKAEQ----YLADS--GIPYTIIRAGGLQDKE-GG---IRELLVGKDDELLQTETRT  280 (331)
Q Consensus       216 ~~---~~~~~~-~~~-~~y~~sK~~~e~----~~~~~--~~~~~ilrp~~v~g~~-~~---~~~~~~~~~~~~~~~~~~~  280 (331)
                      +.   ..+... +.. ..|+.+|.....    +.++.  |+.+..+.||.+.++. ..   ....+...   +   .+.+
T Consensus       179 ~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~---l---~~~~  252 (314)
T KOG1208|consen  179 DLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKK---L---SWPL  252 (314)
T ss_pred             chhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHH---H---HHHh
Confidence            11   111111 222 349999988543    33332  7999999999998873 22   11100000   0   0111


Q ss_pred             -cCHHHHHHHHHHHhcCcc
Q 046297          281 -IARADVAEVCIQALQFEE  298 (331)
Q Consensus       281 -i~v~Dva~~~~~~l~~~~  298 (331)
                       -+.+.-|+..+.+..+|+
T Consensus       253 ~ks~~~ga~t~~~~a~~p~  271 (314)
T KOG1208|consen  253 TKSPEQGAATTCYAALSPE  271 (314)
T ss_pred             ccCHHHHhhheehhccCcc
Confidence             256777777777777764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=7.1e-13  Score=119.24  Aligned_cols=215  Identities=12%  Similarity=0.037  Sum_probs=128.8

Q ss_pred             cCCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCC---------chh--hhc----C-C-----CCcEEEccC
Q 046297           79 SMAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTE---------ESK--QKI----G-G-----ADDLFIGDI  135 (331)
Q Consensus        79 ~~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~---------~~~--~~l----~-~-----~~~~v~~Dl  135 (331)
                      +.++|+++||||+  .+||+++++.|.++  |++|++.+|.+         +..  ...    . .     .+..+..|+
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~--Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEA--GATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHC--CCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            3457889999995  89999999999999  99999876531         000  000    0 0     011123444


Q ss_pred             CCcc------------------cHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH
Q 046297          136 RDSN------------------SIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG  190 (331)
Q Consensus       136 ~d~~------------------~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~  190 (331)
                      .+.+                  ++.++++       ++|++|||||........+.....++++..       +++|+.+
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~-------~~vNl~g  155 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAA-------LSTSSYS  155 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHH-------HHHHhHH
Confidence            4443                  2344332       589999999864321111222233333333       4899999


Q ss_pred             HHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------h-cCCCEEEEecCcccCCCc
Q 046297          191 QKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------D-SGIPYTIIRAGGLQDKEG  260 (331)
Q Consensus       191 ~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~~~~~ilrp~~v~g~~~  260 (331)
                      ...+++++...  .-.++|++||..+.... |.  +. ..|..+|...+.+.+       . +|++++.|.||.+..+..
T Consensus       156 ~~~l~~a~~p~m~~~G~ii~iss~~~~~~~-p~--~~-~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~  231 (299)
T PRK06300        156 FVSLLSHFGPIMNPGGSTISLTYLASMRAV-PG--YG-GGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAG  231 (299)
T ss_pred             HHHHHHHHHHHhhcCCeEEEEeehhhcCcC-CC--cc-HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhh
Confidence            88877776532  12478999887653322 21  11 259999999876654       2 489999999999876642


Q ss_pred             ch----hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          261 GI----RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       261 ~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ..    ...........+.  ......+|+++++++++....  ..|+++.+.+
T Consensus       232 ~~~~~~~~~~~~~~~~~p~--~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG  283 (299)
T PRK06300        232 KAIGFIERMVDYYQDWAPL--PEPMEAEQVGAAAAFLVSPLASAITGETLYVDH  283 (299)
T ss_pred             hcccccHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            10    0000000001111  124678999999999887542  4577777765

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=1e-12  Score=114.45  Aligned_cols=203  Identities=15%  Similarity=0.105  Sum_probs=140.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC---------CcEEEccCCCcccHHHHhc-------
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA---------DDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~---------~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+|+||||+..+|..++.++..+  |+.|+++.|+..++.++..+         +.+..+|+.|.+.+...++       
T Consensus        34 ~hi~itggS~glgl~la~e~~~~--ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~  111 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKRE--GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG  111 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHc--cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence            57999999999999999999999  99999999998887664332         4477899999888887775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C-CCeEEEEccCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G-AKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-vk~~v~~SS~~~~~~~~~~  221 (331)
                      .+|.+|||||..-...       ++  +...++.+..+++|..|+.+++.++..+    . ..+|+.+||..+.-+-...
T Consensus       112 ~~d~l~~cAG~~v~g~-------f~--~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy  182 (331)
T KOG1210|consen  112 PIDNLFCCAGVAVPGL-------FE--DLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY  182 (331)
T ss_pred             CcceEEEecCcccccc-------cc--cCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc
Confidence            3699999999643221       11  1112223455689999998888776432    2 3489999998654444444


Q ss_pred             CCCCcchHHHHHHHHHHH---HHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          222 NSLGNGNILVWKRKAEQY---LADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~---~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      ..|..++++. |..++.+   +..+++.++...|+.+-.|+-...+........+..++.+.+..+++|++++.-+...
T Consensus       183 saYs~sK~al-rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  183 SAYSPSKFAL-RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             cccccHHHHH-HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhhc
Confidence            3333333322 3333332   3357999999999999888644333333333344455666788999999999877654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=5.3e-14  Score=111.87  Aligned_cols=211  Identities=16%  Similarity=0.085  Sum_probs=141.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC----CCcEEEccCCCcccHHHHhc---CCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG----ADDLFIGDIRDSNSIIPAIQ---GIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~----~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~  153 (331)
                      .++.|++||+..+||+.+++.|.+.  |.+|+++.|+++.+..+-+    .++.+++|+.+.+.+.+++.   -+|.++|
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~a--GA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN   83 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKA--GAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN   83 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhc--CCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence            4678999999999999999999999  9999999999988877533    37889999999888888886   4799999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCC-eEEEEccCCCCCCCCCCCCCCcch
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAK-QIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk-~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      |||..-...  +.+...++.+..|       ++|+.+..++.+...+    .+++ .+|.+||.....+-..     .+.
T Consensus        84 NAgvA~~~p--f~eiT~q~fDr~F-------~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n-----Htv  149 (245)
T KOG1207|consen   84 NAGVATNHP--FGEITQQSFDRTF-------AVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN-----HTV  149 (245)
T ss_pred             cchhhhcch--HHHHhHHhhccee-------eeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC-----ceE
Confidence            999744321  1122222333344       8898887777666332    3332 6999999765333221     145


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccC-C-cccccCHHHHHHHHHHHhcCcc-
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQ-T-ETRTIARADVAEVCIQALQFEE-  298 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~-~-~~~~i~v~Dva~~~~~~l~~~~-  298 (331)
                      |..+|.+.+.+-+       ...+++..+.|..++...+.-...=..+...+.+ - --.|.-+++|+.+++.+|.+.. 
T Consensus       150 YcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  150 YCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSS  229 (245)
T ss_pred             EeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcC
Confidence            8889998876554       2468899999998876543210000011111111 0 1235678999999999887654 


Q ss_pred             -cCCceEEec
Q 046297          299 -AKFKAFDLA  307 (331)
Q Consensus       299 -~~~~~~~i~  307 (331)
                       ..|.+.-+.
T Consensus       230 mttGstlpve  239 (245)
T KOG1207|consen  230 MTTGSTLPVE  239 (245)
T ss_pred             cccCceeeec
Confidence             234444444

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.46  E-value=9.7e-13  Score=115.62  Aligned_cols=165  Identities=18%  Similarity=0.168  Sum_probs=113.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hh---h-cC----CCCcEEEccCCC-cccHHHHhc--
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQ---K-IG----GADDLFIGDIRD-SNSIIPAIQ--  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~---~-l~----~~~~~v~~Dl~d-~~~~~~~l~--  146 (331)
                      +.+++||||||++.||+.+++.|+++  |++|+++.|+.+.  .+   . ..    ..+.+..+|+++ .+.+..+++  
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALARE--GARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            34688999999999999999999988  9999988887543  11   1 22    346677899998 877776664  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~~~~~  220 (331)
                           ++|+++||||...... .+.....+.+       ...+++|+.+...+.+++... ..++||++||..+. ...+
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~-~~~~~~~~~~-------~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~  151 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDA-PLEELTEEDW-------DRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPP  151 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCC-ChhhCCHHHH-------HHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCC
Confidence                 4899999999754310 0111111222       333488888877766633221 01199999999875 3333


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCC
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKE  259 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~  259 (331)
                      .    ...|..+|...+.+.+       ..|++++.+.||.+-.+.
T Consensus       152 ~----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         152 G----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             C----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence            2    2458999999775543       468999999999665443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.45  E-value=7.3e-13  Score=108.86  Aligned_cols=161  Identities=17%  Similarity=0.179  Sum_probs=120.4

Q ss_pred             CCeEEEEC-CCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCcccHHHHhc--------CCCE
Q 046297           82 KSTVLVTG-AGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNSIIPAIQ--------GIDA  150 (331)
Q Consensus        82 ~~~VlVtG-atG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~~~~~l~--------~~d~  150 (331)
                      .++||||| +.|+||.+|+++|.+.  ||.|+++.|+.+....|.  .++...+.|+++++.+.+...        ..|+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~--G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARN--GYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhC--CeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            57899997 5699999999999999  999999999988877764  458899999999998887653        4799


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      +|||||..=...         -.+.....-+.++++|+.|..++.++....   .-..||+++|..++-+ .|+.    +
T Consensus        85 L~NNAG~~C~~P---------a~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp-fpf~----~  150 (289)
T KOG1209|consen   85 LYNNAGQSCTFP---------ALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP-FPFG----S  150 (289)
T ss_pred             EEcCCCCCcccc---------cccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec-cchh----h
Confidence            999999733221         112222333566699999877776665311   1247999999876433 2222    5


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCC
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDK  258 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~  258 (331)
                      .|.++|+++.+|.+       -.|++++.+-+|.|...
T Consensus       151 iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  151 IYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             hhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence            69999999998876       36889999999988664

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.44  E-value=2e-12  Score=113.13  Aligned_cols=186  Identities=19%  Similarity=0.183  Sum_probs=125.0

Q ss_pred             HHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc----CCCEEEEcccCCCCCCCCCCCCCCCCC
Q 046297           98 VYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ----GIDALIILTSAVPKMKPDFDPAKGGRP  173 (331)
Q Consensus        98 l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~----~~d~Vi~~ag~~~~~~~~~~~~~~~~p  173 (331)
                      ++++|+++  |++|++++|++++..    ...++++|++|.+++.++++    ++|+||||||....          .++
T Consensus         1 ~a~~l~~~--G~~Vv~~~r~~~~~~----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~----------~~~   64 (241)
T PRK12428          1 TARLLRFL--GARVIGVDRREPGMT----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT----------APV   64 (241)
T ss_pred             ChHHHHhC--CCEEEEEeCCcchhh----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC----------CCH
Confidence            47889999  999999999876542    24678999999999998886    58999999996321          123


Q ss_pred             ccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCC------------------------CCCCCCCcc
Q 046297          174 EFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLN------------------------HPLNSLGNG  227 (331)
Q Consensus       174 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~------------------------~~~~~~~~~  227 (331)
                      +..       +++|+.++..+++++...  +-++||++||..++...                        .|.  ....
T Consensus        65 ~~~-------~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  135 (241)
T PRK12428         65 ELV-------ARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV--ALAT  135 (241)
T ss_pred             HHh-------hhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCC--Cccc
Confidence            333       489999999999888653  23699999998764210                        111  1225


Q ss_pred             hHHHHHHHHHHHHH--------hcCCCEEEEecCcccCCCcch-hhhhccC-CccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          228 NILVWKRKAEQYLA--------DSGIPYTIIRAGGLQDKEGGI-RELLVGK-DDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       228 ~y~~sK~~~e~~~~--------~~~~~~~ilrp~~v~g~~~~~-~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      .|..+|...+.+.+        ..|+++++|+||++.++.... ....... ..........+...+|+|++++.++..+
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChh
Confidence            79999998875432        358999999999998875321 1000000 0000000122467899999999988654


Q ss_pred             c--cCCceEEecc
Q 046297          298 E--AKFKAFDLAS  308 (331)
Q Consensus       298 ~--~~~~~~~i~~  308 (331)
                      .  ..|+.+.+.+
T Consensus       216 ~~~~~G~~i~vdg  228 (241)
T PRK12428        216 ARWINGVNLPVDG  228 (241)
T ss_pred             hcCccCcEEEecC
Confidence            2  3466666655

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.37  E-value=3.4e-12  Score=111.42  Aligned_cols=163  Identities=17%  Similarity=0.135  Sum_probs=116.0

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--------CCcEEEccCCCccc----HHHHhc--CCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--------ADDLFIGDIRDSNS----IIPAIQ--GID  149 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--------~~~~v~~Dl~d~~~----~~~~l~--~~d  149 (331)
                      =.+|||||.+||++.+++|+++  |.+|++++|++++++..++        ++.++..|+++.+.    +.+.+.  ++-
T Consensus        51 WAVVTGaTDGIGKayA~eLAkr--G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   51 WAVVTGATDGIGKAYARELAKR--GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             EEEEECCCCcchHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            4789999999999999999999  9999999999999876533        37888999997765    444444  367


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      ++|||+|........+...    |+.   .......+|+.+    ++.++.-|.+.+-.-+|++||..+..+....    
T Consensus       129 ILVNNvG~~~~~P~~f~~~----~~~---~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~----  197 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPESFLKY----PEG---ELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLL----  197 (312)
T ss_pred             EEEecccccCCCcHHHHhC----chh---hhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhH----
Confidence            8999999855331111111    110   113344778766    4556666766666689999999876554433    


Q ss_pred             cchHHHHHHHHHHHH-------HhcCCCEEEEecCcccCCCc
Q 046297          226 NGNILVWKRKAEQYL-------ADSGIPYTIIRAGGLQDKEG  260 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~-------~~~~~~~~ilrp~~v~g~~~  260 (331)
                       +.|.++|...+.+-       +..|+.+-.+-|..|-++..
T Consensus       198 -s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  198 -SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence             45889998765443       24689999999998887654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.33  E-value=1.4e-11  Score=135.53  Aligned_cols=163  Identities=15%  Similarity=0.063  Sum_probs=119.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----------------------------------------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----------------------------------------  120 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----------------------------------------  120 (331)
                      .+++||||||+++||..++++|++++ |++|++++|++..                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~-ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQC-QAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhc-CCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            36789999999999999999999984 6999999998200                                        


Q ss_pred             -----------hh---hcCCCCcEEEccCCCcccHHHHhc------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccC
Q 046297          121 -----------KQ---KIGGADDLFIGDIRDSNSIIPAIQ------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEG  180 (331)
Q Consensus       121 -----------~~---~l~~~~~~v~~Dl~d~~~~~~~l~------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~  180 (331)
                                 +.   .....+.++.+|++|.+.+.++++      ++|.||||||.....  .+.....+++       
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~--~i~~~t~e~f------- 2145 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADK--HIQDKTLEEF------- 2145 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCC--CcccCCHHHH-------
Confidence                       00   012236788999999998888775      589999999974331  1111122222       


Q ss_pred             CCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH----h-cCCCEEEEecCcc
Q 046297          181 AYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA----D-SGIPYTIIRAGGL  255 (331)
Q Consensus       181 ~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~-~~~~~~ilrp~~v  255 (331)
                      ...+++|+.|+.++++++.....++||++||..+.....     +...|+.+|.....+.+    + .+++++.+.||.+
T Consensus      2146 ~~v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~-----gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~w 2220 (2582)
T TIGR02813      2146 NAVYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNT-----GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPW 2220 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCC-----CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCee
Confidence            344599999999999999887778999999987654332     22569999988765543    2 3688999999988


Q ss_pred             cCC
Q 046297          256 QDK  258 (331)
Q Consensus       256 ~g~  258 (331)
                      -+.
T Consensus      2221 dtg 2223 (2582)
T TIGR02813      2221 DGG 2223 (2582)
T ss_pred             cCC
Confidence            664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.31  E-value=4e-11  Score=99.41  Aligned_cols=149  Identities=14%  Similarity=0.155  Sum_probs=109.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC------CCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG------GADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~------~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      |+++||||+|++|. +++.|+++  |++|++++|++++.+.+.      ..+.++.+|++|++++.++++       ++|
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~--G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEK--GFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHC--cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            57999999988776 99999999  999999999876654421      246788899999999988875       356


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC----eEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK----QIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk----~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      .+|+.+                               ++.+..++..+|++.|++    +|+++=+..+.++.       
T Consensus        78 ~lv~~v-------------------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~~-------  119 (177)
T PRK08309         78 LAVAWI-------------------------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAASDPR-------  119 (177)
T ss_pred             EEEEec-------------------------------cccchhhHHHHHHHHccCCCCceEEEEeCCcCCchh-------
Confidence            666554                               455689999999999999    88887655442221       


Q ss_pred             cchHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          226 NGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                              ...+.... ....|.=|..|++....                 ...|.+-++++++++.+++.+.
T Consensus       120 --------~~~~~~~~-~~~~~~~i~lgf~~~~~-----------------~~rwlt~~ei~~gv~~~~~~~~  166 (177)
T PRK08309        120 --------IPSEKIGP-ARCSYRRVILGFVLEDT-----------------YSRWLTHEEISDGVIKAIESDA  166 (177)
T ss_pred             --------hhhhhhhh-cCCceEEEEEeEEEeCC-----------------ccccCchHHHHHHHHHHHhcCC
Confidence                    11222222 34577777777776543                 3457888999999999998764

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.26  E-value=2.2e-11  Score=101.71  Aligned_cols=157  Identities=20%  Similarity=0.174  Sum_probs=102.5

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-h------hhhc---CCCCcEEEccCCCcccHHHHhc-------
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-S------KQKI---GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~------~~~l---~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ++|||||+|.||..+++.|++++ ..+++++.|+.. .      .+++   ..++.++.+|++|++++.++++       
T Consensus         2 tylitGG~gglg~~la~~La~~~-~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERG-ARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT--SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcC-CCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            58999999999999999999994 558999999831 1      1122   2348899999999999999985       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      .++.|||++|......  +     .  +...+........-+.+..++.++.....++.||+.||..+.-...     +.
T Consensus        81 ~i~gVih~ag~~~~~~--~-----~--~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~-----gq  146 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAP--I-----Q--DQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP-----GQ  146 (181)
T ss_dssp             -EEEEEE-------B---G-----C--C--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T-----TB
T ss_pred             Ccceeeeeeeeecccc--c-----c--cCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc-----ch
Confidence            3689999999743211  0     0  1111111222244577888998888888899999999986533222     33


Q ss_pred             chHHHHHHHHHHHHH---hcCCCEEEEecCcc
Q 046297          227 GNILVWKRKAEQYLA---DSGIPYTIIRAGGL  255 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v  255 (331)
                      ..|+..-...+.+.+   ..+.++..|.-+.+
T Consensus       147 ~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  147 SAYAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             HhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence            668888887776654   56888988887754

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.23  E-value=3.8e-11  Score=99.73  Aligned_cols=223  Identities=15%  Similarity=0.035  Sum_probs=137.4

Q ss_pred             eEEEECCCChhHHHHHH-----HHHhc--CCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           84 TVLVTGAGGRTGQIVYK-----KLKER--SEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~-----~Ll~~--~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +.++-+++|+|+..|..     ++-..  ...|.|++++|.+.+.+     +.+-+.|..-..      -.||++++.+|
T Consensus        14 ~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r-----itw~el~~~Gip------~sc~a~vna~g   82 (315)
T KOG3019|consen   14 DAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR-----ITWPELDFPGIP------ISCVAGVNAVG   82 (315)
T ss_pred             cCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc-----cccchhcCCCCc------eehHHHHhhhh
Confidence            45667889999977766     33322  01499999999986533     333333332111      03444444444


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCCCC-----CCCCCcchH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLNHP-----LNSLGNGNI  229 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~~~-----~~~~~~~~y  229 (331)
                      ....     +|.  ++|...|+.+..--+  +..+..++++..++.  .+.+|++|....|.+...     ........|
T Consensus        83 ~n~l-----~P~--rRWsp~fqkev~gSR--i~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~  153 (315)
T KOG3019|consen   83 NNAL-----LPI--RRWSPEFQKEVKGSR--IRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDI  153 (315)
T ss_pred             hhcc-----Cch--hhcCHHHHHHhhcce--eeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHH
Confidence            3211     122  244444422222122  333788888888763  457888888765443211     111111223


Q ss_pred             HH---HHHHHHHHHHhcCCCEEEEecCcccCCCcchhhh-------hccCCccccCCcccccCHHHHHHHHHHHhcCccc
Q 046297          230 LV---WKRKAEQYLADSGIPYTIIRAGGLQDKEGGIREL-------LVGKDDELLQTETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       230 ~~---sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                      ..   .+|+..........+.+++|.|.+.|.+++....       -.|.+..-.+..++|||++|++..+..+++++..
T Consensus       154 ~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v  233 (315)
T KOG3019|consen  154 LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSV  233 (315)
T ss_pred             HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCC
Confidence            22   2454444444456899999999999988763322       2233333334568999999999999999999877


Q ss_pred             CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          300 KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       300 ~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .| +.|-..   +++.+..|+++.+.++++|
T Consensus       234 ~G-ViNgvA---P~~~~n~Ef~q~lg~aL~R  260 (315)
T KOG3019|consen  234 KG-VINGVA---PNPVRNGEFCQQLGSALSR  260 (315)
T ss_pred             Cc-eecccC---CCccchHHHHHHHHHHhCC
Confidence            66 788888   8999999999999998876

>PRK06720 hypothetical protein; Provisional

Probab=99.14  E-value=8.7e-10  Score=90.84  Aligned_cols=77  Identities=23%  Similarity=0.172  Sum_probs=62.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c---CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I---GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+++++||||+|+||..+++.|+++  |++|++++|+.+....    +   .....++.+|+++.+.+.++++       
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQ--GAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999  9999999998654422    2   2335678999999988877553       


Q ss_pred             CCCEEEEcccCCC
Q 046297          147 GIDALIILTSAVP  159 (331)
Q Consensus       147 ~~d~Vi~~ag~~~  159 (331)
                      ++|++|||||...
T Consensus        93 ~iDilVnnAG~~~  105 (169)
T PRK06720         93 RIDMLFQNAGLYK  105 (169)
T ss_pred             CCCEEEECCCcCC
Confidence            6899999999754

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.12  E-value=1.6e-10  Score=92.11  Aligned_cols=213  Identities=15%  Similarity=0.156  Sum_probs=143.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----hhhcCCCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----KQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      +-..|||||...+|+..+++|.++  |..|.+++-..++    .+++..++.|.+.|+++++++..+++       +.|+
T Consensus         9 glvalvtggasglg~ataerlakq--gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    9 GLVALVTGGASGLGKATAERLAKQ--GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             CeeEEeecCcccccHHHHHHHHhc--CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            345799999999999999999999  9999999986544    34566778999999999999998885       5799


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----Hc-----CCC-eEEEEccCCCCCCCCC
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AA-----GAK-QIVLVGSMGGTNLNHP  220 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~-----~vk-~~v~~SS~~~~~~~~~  220 (331)
                      .+||||..-..+ .++-.  ......+++.....++|+.|+.|+++.-.    ++     |-+ -+|.+.|...++....
T Consensus        87 ~vncagia~a~k-tyn~~--k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g  163 (260)
T KOG1199|consen   87 LVNCAGIAYAFK-TYNVQ--KKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG  163 (260)
T ss_pred             eeeccceeeeee-eeeec--ccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence            999999743321 01100  11123344455666999999999887532    21     211 3666666666554433


Q ss_pred             CCCCCcchHHHHHHHHH-------HHHHhcCCCEEEEecCcccCCCcc-----hhhhhccCCccccCCcccccCHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAE-------QYLADSGIPYTIIRAGGLQDKEGG-----IRELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e-------~~~~~~~~~~~ilrp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      .     ..|.++|..+-       +-+...|++++.+-||.+-.|.-.     ....+.. ..+   .+...-+..+.+.
T Consensus       164 q-----aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~-~ip---fpsrlg~p~eyah  234 (260)
T KOG1199|consen  164 Q-----AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQ-LIP---FPSRLGHPHEYAH  234 (260)
T ss_pred             h-----hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHH-hCC---CchhcCChHHHHH
Confidence            3     45778887632       223346899999999977666422     1111111 111   1233457788888


Q ss_pred             HHHHHhcCcccCCceEEecc
Q 046297          289 VCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~  308 (331)
                      .+-.+++++-..|++..+.+
T Consensus       235 lvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  235 LVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHHhCcccCCeEEEecc
Confidence            88888899887888877764

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.06  E-value=2.7e-09  Score=96.43  Aligned_cols=166  Identities=15%  Similarity=0.031  Sum_probs=107.2

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--CC-CCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--GG-ADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ...++||+|+|++|.||+.++..|..++..++++++++.....+.+  .+ ...+...+.+|+.++.+.++++|+||+++
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita   84 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA   84 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence            3456799999999999999999998663357899999843222111  11 12344556777677788999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC------C----CCCCC---CC
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG------T----NLNHP---LN  222 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~------~----~~~~~---~~  222 (331)
                      |......        .++.       +.+..|+..++++++++++++++++|+++|..+      .    .....   ..
T Consensus        85 G~~~~~~--------~tR~-------dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~  149 (321)
T PTZ00325         85 GVPRKPG--------MTRD-------DLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRK  149 (321)
T ss_pred             CCCCCCC--------CCHH-------HHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhh
Confidence            9733211        1111       223779999999999999999999999999853      1    11111   11


Q ss_pred             CCCcchHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcc
Q 046297          223 SLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG  261 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~  261 (331)
                      .++.. ...+-+.-..+.+..+++...++ ++|+|.++.
T Consensus       150 viG~g-~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        150 LFGVT-TLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             eeech-hHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            22211 11222222222335677777777 788887654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.90  E-value=1.8e-09  Score=90.18  Aligned_cols=201  Identities=12%  Similarity=0.104  Sum_probs=124.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC--chhhhcC----CCCcEEEccCCCcccHHHHhc-------CC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE--ESKQKIG----GADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~--~~~~~l~----~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      .+.+|+||++.+||..+++.+.+.  +.+...+.++.  ...+.+.    .......+|+.+...+.+.++       +-
T Consensus         6 r~villTGaSrgiG~~~v~~i~ae--d~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAE--DDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhc--chHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            456899999999999999999998  66655544443  2222111    112233345444443333332       46


Q ss_pred             CEEEEcccCCCCCCCCC-CCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CCeEEEEccCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDF-DPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk~~v~~SS~~~~~~~~~~~  222 (331)
                      |.||||||......... ++.+...|+.+|       +.|+.....+..++..    .. .+.+|++||.....+-..+ 
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~-------~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w-  155 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYW-------DLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW-  155 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHH-------HhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH-
Confidence            99999999877654322 345556677788       8888887777666543    22 4689999998765544333 


Q ss_pred             CCCcchHHHHHHHHHHHHH-----hc-CCCEEEEecCcccCCCcch-hhhhccCCcc---cc---CCcccccCHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-----DS-GIPYTIIRAGGLQDKEGGI-RELLVGKDDE---LL---QTETRTIARADVAEV  289 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-----~~-~~~~~ilrp~~v~g~~~~~-~~~~~~~~~~---~~---~~~~~~i~v~Dva~~  289 (331)
                          ..|+.+|++.+-|++     ++ ++.+..++||.+=.+.... .+-. +-...   ..   ...-..++..+-++.
T Consensus       156 ----a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~-~~~p~~l~~f~el~~~~~ll~~~~~a~~  230 (253)
T KOG1204|consen  156 ----AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETS-RMTPADLKMFKELKESGQLLDPQVTAKV  230 (253)
T ss_pred             ----HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhcc-CCCHHHHHHHHHHHhcCCcCChhhHHHH
Confidence                348899999888776     34 7888899999875543211 1000 00000   00   011234677888888


Q ss_pred             HHHHhcCc
Q 046297          290 CIQALQFE  297 (331)
Q Consensus       290 ~~~~l~~~  297 (331)
                      +..+++..
T Consensus       231 l~~L~e~~  238 (253)
T KOG1204|consen  231 LAKLLEKG  238 (253)
T ss_pred             HHHHHHhc
Confidence            88887765

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.85  E-value=1.2e-08  Score=93.51  Aligned_cols=73  Identities=25%  Similarity=0.339  Sum_probs=66.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcC----CCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIG----GADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~----~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +++|||.|+ |+||+.++..|+++  + ++|++.+|+.++.+++.    .+++..+.|+.|.+.+.+++++.|+|||++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~--~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQN--GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence            478999998 99999999999999  6 99999999988877652    3599999999999999999999999999997


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      +
T Consensus        78 ~   78 (389)
T COG1748          78 P   78 (389)
T ss_pred             c
Confidence            5

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.83  E-value=3.8e-08  Score=89.52  Aligned_cols=164  Identities=15%  Similarity=0.092  Sum_probs=98.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcC-----CCCeEEEEecCCch--hhhcCCC----CcEEEccCCCcccHHHHhcCCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERS-----EQYAARGLVRTEES--KQKIGGA----DDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~-----~g~~V~~l~R~~~~--~~~l~~~----~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      .+|+||||+|++|++++..|+..+     .+.+++++++++..  .....-.    ......|+....++.+.++++|+|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV   82 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA   82 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence            579999999999999999999852     14689999996532  1111000    102233555567788889999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCe-EEEEccCC-----C-CC--CCCCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQ-IVLVGSMG-----G-TN--LNHPL  221 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~-~v~~SS~~-----~-~~--~~~~~  221 (331)
                      ||+||.....        ..+....       .+.|+...+.+.+.++++. -+- +|.+|...     . .+  ...|.
T Consensus        83 I~tAG~~~~~--------~~~R~~l-------~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~  147 (325)
T cd01336          83 ILVGAMPRKE--------GMERKDL-------LKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPK  147 (325)
T ss_pred             EEeCCcCCCC--------CCCHHHH-------HHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCH
Confidence            9999974331        1112223       3778888899988888874 343 44444321     0 01  11111


Q ss_pred             CCCCcchHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcc
Q 046297          222 NSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG  261 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~  261 (331)
                      ...+...+..+.+.-..+.+..+++...++-..|+|.++.
T Consensus       148 ~~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         148 ENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             HHEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence            1122222444445445555567777777776667776543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.79  E-value=1.4e-07  Score=81.53  Aligned_cols=72  Identities=14%  Similarity=0.112  Sum_probs=50.8

Q ss_pred             EEE-CCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCC--cccHHHHhcCCCEEEEcccCCC
Q 046297           86 LVT-GAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRD--SNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        86 lVt-GatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d--~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      .|| .+||++|++|++.|+++  ||+|+++.|..........++.++.++-.+  .+.+.+.++++|+|||+||...
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~--G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAA--GHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             eecCccchHHHHHHHHHHHhC--CCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            444 57899999999999999  999999998643221112346666644322  2345566778999999999754

>PLN00106 malate dehydrogenase

Probab=98.72  E-value=1.3e-07  Score=85.65  Aligned_cols=118  Identities=15%  Similarity=0.022  Sum_probs=85.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh--cCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK--IGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~--l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      ..||+|+|++|.||..++..|..++...+++++++++.....  +.+ .......++.+.+++.++++++|+|||+||..
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~   97 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP   97 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence            358999999999999999999977334589999987622111  111 12223446555667889999999999999974


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~  214 (331)
                      ...+        ......       ...|...++++++.+++++.+.+|+++|--+
T Consensus        98 ~~~g--------~~R~dl-------l~~N~~i~~~i~~~i~~~~p~aivivvSNPv  138 (323)
T PLN00106         98 RKPG--------MTRDDL-------FNINAGIVKTLCEAVAKHCPNALVNIISNPV  138 (323)
T ss_pred             CCCC--------CCHHHH-------HHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            3311        112222       3679999999999999999999999888654

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.71  E-value=6.3e-07  Score=75.22  Aligned_cols=215  Identities=16%  Similarity=0.154  Sum_probs=128.9

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCc---hhhhcCCC---CcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEE---SKQKIGGA---DDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~---~~~~l~~~---~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +++|++||+|-.  --|+..|++.|.++  |.++.....++.   +.+++.+.   ..+++||+++.+++.++++     
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~--GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQ--GAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            468999999854  47999999999999  999988887652   23333332   4578999999999988885     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~  222 (331)
                        ++|.|+|+.++.+...-     ...-.+...++....+++.......+.++++..  +-..+|-++=.+...-   .+
T Consensus        82 ~g~lD~lVHsIaFa~k~el-----~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~---vP  153 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEEL-----KGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERV---VP  153 (259)
T ss_pred             hCcccEEEEEeccCChHHh-----CCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceee---cC
Confidence              68999999998664210     000011111111122233333344455555432  2234555443333111   12


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCc----chhhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEG----GIRELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~----~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                      .|  +..+..|...|.-.|       ..|+++..|..|.|-.-..    .+..++......-|  -...++.+||++..+
T Consensus       154 nY--NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aP--l~r~vt~eeVG~tA~  229 (259)
T COG0623         154 NY--NVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAP--LRRNVTIEEVGNTAA  229 (259)
T ss_pred             CC--chhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCC--ccCCCCHHHhhhhHH
Confidence            22  236688999885444       3689999999988754211    13333322111111  123478999999998


Q ss_pred             HHhcC--cccCCceEEecc
Q 046297          292 QALQF--EEAKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~--~~~~~~~~~i~~  308 (331)
                      .++.+  ....|++.++.+
T Consensus       230 fLlSdLssgiTGei~yVD~  248 (259)
T COG0623         230 FLLSDLSSGITGEIIYVDS  248 (259)
T ss_pred             HHhcchhcccccceEEEcC
Confidence            88865  235678877766

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.70  E-value=4.5e-08  Score=82.98  Aligned_cols=179  Identities=16%  Similarity=0.178  Sum_probs=110.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC---CeEEEEecCCchhhhc-------CC----CCcEEEccCCCcccHHHHh-
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ---YAARGLVRTEESKQKI-------GG----ADDLFIGDIRDSNSIIPAI-  145 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g---~~V~~l~R~~~~~~~l-------~~----~~~~v~~Dl~d~~~~~~~l-  145 (331)
                      ..|.+||||++.++|..||++|++....   .++.+..|+.++.++.       .+    +++++..|+++..++.++. 
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            3567999999999999999999987322   3566778887765541       12    3789999999887766655 


Q ss_pred             ------cCCCEEEEcccCCCCCCCCCCC---CCCCCCcccc---------------ccCCCcceehHHHHHHHHHHHHH-
Q 046297          146 ------QGIDALIILTSAVPKMKPDFDP---AKGGRPEFYF---------------EEGAYPEQVDWIGQKNQIDAAKA-  200 (331)
Q Consensus       146 ------~~~d~Vi~~ag~~~~~~~~~~~---~~~~~p~~~~---------------~~~~~~~~~nv~~~~~ll~aa~~-  200 (331)
                            ++.|.|+-|||.++...-.+..   .-..+|...+               ++--+..+.||.|...++..... 
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                  3689999999986553211000   0001111111               11123347788886666654432 


Q ss_pred             --c-CCCeEEEEccCCCCCCCCCC----CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCC
Q 046297          201 --A-GAKQIVLVGSMGGTNLNHPL----NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKE  259 (331)
Q Consensus       201 --~-~vk~~v~~SS~~~~~~~~~~----~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~  259 (331)
                        + ...++|.+||..+....-..    ..-+..+|.-+|+..+-+.-       ..|+.-.++.||......
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~  234 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNS  234 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecch
Confidence              2 33489999998653322211    11122457778887664322       357778888998776653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.67  E-value=7.3e-08  Score=90.28  Aligned_cols=71  Identities=24%  Similarity=0.406  Sum_probs=58.3

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcC-----CCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIG-----GADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~-----~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      |+|.|| |++|+.+++.|+++. .+ +|++.+|+.++.+.+.     .++.+++.|+.|.+++.++++++|+|||+++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            789999 999999999999984 34 8999999998866642     35899999999999999999999999999985

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.61  E-value=9.3e-08  Score=84.87  Aligned_cols=79  Identities=18%  Similarity=0.204  Sum_probs=65.6

Q ss_pred             eEEEECCCChhHHHHHHHHHh--cCCCCeEEEEecCCchhhhc----C-------CCCcEEEccCCCcccHHHHhcCCCE
Q 046297           84 TVLVTGAGGRTGQIVYKKLKE--RSEQYAARGLVRTEESKQKI----G-------GADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~--~~~g~~V~~l~R~~~~~~~l----~-------~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      -++|.||+||.|.++++++++  ..++...-+-.|+++++++.    .       ....++.+|..|++++.+..+.+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            389999999999999999998  22388999999999887652    0       1134889999999999999999999


Q ss_pred             EEEcccCCCCCC
Q 046297          151 LIILTSAVPKMK  162 (331)
Q Consensus       151 Vi~~ag~~~~~~  162 (331)
                      |+||+|+....+
T Consensus        87 ivN~vGPyR~hG   98 (423)
T KOG2733|consen   87 IVNCVGPYRFHG   98 (423)
T ss_pred             EEeccccceecC
Confidence            999999866543

>PRK05086 malate dehydrogenase; Provisional

Probab=98.58  E-value=5.6e-07  Score=81.52  Aligned_cols=113  Identities=18%  Similarity=0.085  Sum_probs=78.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHh-cCCCCeEEEEecCCchhh---hcCC-C-CcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKE-RSEQYAARGLVRTEESKQ---KIGG-A-DDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~-~~~g~~V~~l~R~~~~~~---~l~~-~-~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |||+|+||+|.+|++++..|.. ...++++++++|++....   .+.. + ...+.+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            6899999999999999998865 323678888888753210   1111 1 223333  224556678899999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      ......        ..       ..+....|......+++++++++.+++|.+.|-
T Consensus        79 ~~~~~~--------~~-------R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN  119 (312)
T PRK05086         79 VARKPG--------MD-------RSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN  119 (312)
T ss_pred             CCCCCC--------CC-------HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            743321        01       112236788899999999999999999888875

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.54  E-value=2.3e-06  Score=78.46  Aligned_cols=78  Identities=17%  Similarity=0.150  Sum_probs=59.9

Q ss_pred             CCCCeEEEECCCChhHHH--HHHHHHhcCCCCeEEEEecCCch---------------hhh-c---CCCCcEEEccCCCc
Q 046297           80 MAKSTVLVTGAGGRTGQI--VYKKLKERSEQYAARGLVRTEES---------------KQK-I---GGADDLFIGDIRDS  138 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~--l~~~Ll~~~~g~~V~~l~R~~~~---------------~~~-l---~~~~~~v~~Dl~d~  138 (331)
                      ..+|++|||||++.+|.+  +++.| +.  |+.|+++++..+.               ..+ +   ...+..+.+|++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~--GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GA--GADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-Hc--CCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH
Confidence            346899999999999999  89999 88  9999888853211               111 1   12356789999999


Q ss_pred             ccHHHHhc-------CCCEEEEcccCCCC
Q 046297          139 NSIIPAIQ-------GIDALIILTSAVPK  160 (331)
Q Consensus       139 ~~~~~~l~-------~~d~Vi~~ag~~~~  160 (331)
                      +.+.++++       ++|+|||++|....
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r  144 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRR  144 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCC
Confidence            88877764       58999999998644

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.52  E-value=8.2e-07  Score=77.80  Aligned_cols=95  Identities=19%  Similarity=0.093  Sum_probs=73.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      |+|||+||||. |+.|++.|.++  ||+|++..|++.....+... ...+..+..|.+++.+.++  ++|+||+.+.+. 
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~--g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf-   76 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQ--GIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPF-   76 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhC--CCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH-
Confidence            57999999999 99999999999  99999999998765555442 3455566677777888886  599999998752 


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEE
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVL  208 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~  208 (331)
                                                 -....+++.++|++.|+..+=|
T Consensus        77 ---------------------------A~~is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        77 ---------------------------AAQITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             ---------------------------HHHHHHHHHHHHHHhCCcEEEE
Confidence                                       2334678888888888764443

This enzyme was found to be a monomer by gel filtration.

>PRK09620 hypothetical protein; Provisional

Probab=98.51  E-value=2e-07  Score=80.46  Aligned_cols=194  Identities=14%  Similarity=0.138  Sum_probs=100.4

Q ss_pred             CCCeEEEECCC----------------ChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCC--CcEEEccCCCcccH
Q 046297           81 AKSTVLVTGAG----------------GRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGA--DDLFIGDIRDSNSI  141 (331)
Q Consensus        81 ~~~~VlVtGat----------------G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~--~~~v~~Dl~d~~~~  141 (331)
                      .+++||||+|.                ||+|++|+++|+++  |++|+++++.... ...+...  ...+.+|....+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~--Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l   79 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK--GAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKM   79 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC--CCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHH
Confidence            46889999775                99999999999999  9999998874321 1112212  33455533333567


Q ss_pred             HHHhc--CCCEEEEcccCCCCCCCCCCCCCCC---CCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC
Q 046297          142 IPAIQ--GIDALIILTSAVPKMKPDFDPAKGG---RPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       142 ~~~l~--~~d~Vi~~ag~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~  216 (331)
                      .++++  ++|+|||+|+............+..   .... .+.. ....+.+.-+..++..+++..-+.+ .++-..-.+
T Consensus        80 ~~~~~~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~K-i~~~-~~~~l~L~~~pdIl~~l~~~~~~~~-~vGFkaEt~  156 (229)
T PRK09620         80 KSIITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGK-ISSD-IAPIIHFQKAPKVLKQIKQWDPETV-LVGFKLESD  156 (229)
T ss_pred             HHHhcccCCCEEEECccccceecccccccccccccccCC-CcCC-CCCeEEEEECcHHHHHHHhhCCCCE-EEEEEeccC
Confidence            77774  6899999999844322100000000   0000 0000 1112333445566666665432332 233222111


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHhcCCCEEEEecC-cccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG-GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~-~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                        ..        .-.--..+++-+++++.++++...- ..+|.... ..++.....     .....+=.++|+-++..+.
T Consensus       157 --~~--------~~~l~~~A~~kl~~k~~D~ivaN~~~~~~g~~~~-~~ii~~~~~-----~~~~~~K~~iA~~i~~~i~  220 (229)
T PRK09620        157 --VN--------EEELFERAKNRMEEAKASVMIANSPHSLYSRGAM-HYVIGQDGK-----GQLCNGKDETAKEIVKRLE  220 (229)
T ss_pred             --CC--------HHHHHHHHHHHHHHcCCCEEEECCcccccCCCcE-EEEEeCCCc-----cccCCCHHHHHHHHHHHHH
Confidence              10        0011233555667788999887653 33444432 112222111     1123455788888877654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.51  E-value=4.1e-06  Score=78.15  Aligned_cols=187  Identities=13%  Similarity=0.146  Sum_probs=106.7

Q ss_pred             cCCCCeEEEECC----------------CChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHH
Q 046297           79 SMAKSTVLVTGA----------------GGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSII  142 (331)
Q Consensus        79 ~~~~~~VlVtGa----------------tG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~  142 (331)
                      +..+++||||||                +|.+|.+++++|.++  |++|++++++.+ .. ..  ..+...|+++.+++.
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~--Ga~V~~v~~~~~-~~-~~--~~~~~~dv~~~~~~~  258 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR--GADVTLVSGPVN-LP-TP--AGVKRIDVESAQEML  258 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC--CCEEEEeCCCcc-cc-CC--CCcEEEccCCHHHHH
Confidence            356889999999                899999999999999  999999998753 21 11  224567999988877


Q ss_pred             HHhc----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC
Q 046297          143 PAIQ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       143 ~~l~----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~  218 (331)
                      +++.    ++|++||+||............++..       +.....+.+.-+..++..+++..-++-+.++-..-.   
T Consensus       259 ~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk-------~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaaEt---  328 (399)
T PRK05579        259 DAVLAALPQADIFIMAAAVADYRPATVAEGKIKK-------GEGELTLELVPNPDILAEVAALKDKRPFVVGFAAET---  328 (399)
T ss_pred             HHHHHhcCCCCEEEEcccccccccccccccCccC-------CCCCceEEEEeCcHHHHHHHhccCCCCEEEEEccCC---
Confidence            7764    68999999997443211111111111       111112333334566666665432221234432211   


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHhcCCCEEEEecC---cccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG---GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~---~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                      +           .....+.+-++++++++++...-   .-+|...+...++......   ..++..+=.++|+.++..+.
T Consensus       329 ~-----------~~~~~A~~kl~~k~~D~ivaN~i~~~~~fg~~~n~~~ii~~~~~~---~~~~~~~K~~iA~~i~~~i~  394 (399)
T PRK05579        329 G-----------DVLEYARAKLKRKGLDLIVANDVSAGGGFGSDDNEVTLIWSDGGE---VKLPLMSKLELARRLLDEIA  394 (399)
T ss_pred             c-----------hHHHHHHHHHHHcCCeEEEEecCCcCCCcCCCceEEEEEECCCcE---EEcCCCCHHHHHHHHHHHHH
Confidence            1           01233455566788999887653   2234433332233221110   01233466888888887653

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.51  E-value=3.3e-07  Score=77.43  Aligned_cols=75  Identities=21%  Similarity=0.198  Sum_probs=62.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC------CCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG------ADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~------~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      ...++++|+||+|.+|+.+++.|++.  |++|+++.|+.++.+.+..      ...+..+|+.+.+++.++++++|+||+
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~  103 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLARE--GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFA  103 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence            34678999999999999999999998  9999999999776544321      355677888888889999999999998


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      +..
T Consensus       104 at~  106 (194)
T cd01078         104 AGA  106 (194)
T ss_pred             CCC
Confidence            765

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.32  E-value=4.2e-06  Score=72.22  Aligned_cols=72  Identities=28%  Similarity=0.418  Sum_probs=63.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh-cC--CCCcEEEccCCCcccHHHH-hcCCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-IG--GADDLFIGDIRDSNSIIPA-IQGIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-l~--~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag~  157 (331)
                      |+++|.|+ |.+|.++++.|.+.  ||.|+++.++++...+ +.  .....+.+|-+|++.+.++ ++++|+++-..+.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~--g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEE--GHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhC--CCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            56888886 99999999999999  9999999999988776 44  3478899999999999998 7899999988873

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.31  E-value=2.1e-05  Score=73.13  Aligned_cols=185  Identities=12%  Similarity=0.112  Sum_probs=109.4

Q ss_pred             cCCCCeEEEECC----------------CChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccH-
Q 046297           79 SMAKSTVLVTGA----------------GGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSI-  141 (331)
Q Consensus        79 ~~~~~~VlVtGa----------------tG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~-  141 (331)
                      +..+++||||||                +|.+|..++++|.++  |++|+++.+.....  ...  .+...|+.+.+++ 
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~--Ga~V~~~~g~~~~~--~~~--~~~~~~v~~~~~~~  255 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR--GADVTLITGPVSLL--TPP--GVKSIKVSTAEEML  255 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC--CCEEEEeCCCCccC--CCC--CcEEEEeccHHHHH
Confidence            356789999998                467999999999999  99999998765421  222  2356788888777 


Q ss_pred             HHHh----cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC
Q 046297          142 IPAI----QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       142 ~~~l----~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~  217 (331)
                      ..++    .++|++|++||............++.       .......+++.-+..++...++..-+++ .++-..-.  
T Consensus       256 ~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~-------~~~~~~~l~L~~~pdil~~l~~~~~~~~-lvgF~aEt--  325 (390)
T TIGR00521       256 EAALNELAKDFDIFISAAAVADFKPKTVFEGKIK-------KQGEELSLKLVKNPDIIAEVRKIKKHQV-IVGFKAET--  325 (390)
T ss_pred             HHHHHhhcccCCEEEEcccccccccccccccccc-------ccCCceeEEEEeCcHHHHHHHhhCCCcE-EEEEEcCC--
Confidence            4444    36899999999854432111111111       1112235566667778887776432333 34432211  


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHhcCCCEEEEecCc--ccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGG--LQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~--v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                      +.       +    ....+++-+++++.++++...-.  -+|...+...++.....    ...+..+=.++|+.++..+
T Consensus       326 ~~-------~----l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~~n~~~li~~~~~----~~~~~~~K~~iA~~i~~~~  389 (390)
T TIGR00521       326 ND-------D----LIKYAKEKLKKKNLDMIVANDVSQRGFGSDENEVYIFSKHGH----KELPLMSKLEVAERILDEI  389 (390)
T ss_pred             Cc-------H----HHHHHHHHHHHcCCCEEEEccCCccccCCCCcEEEEEECCCe----EEeCCCCHHHHHHHHHHHh
Confidence            11       0    13345566678899999876532  24444433333332211    1223346688898887754

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.28  E-value=1.3e-06  Score=79.41  Aligned_cols=73  Identities=26%  Similarity=0.291  Sum_probs=56.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +..+++|+||||+|+||+.+++.|+++. | .+++++.|+.++...+..++  ..+|+.   ++.+++.++|+|||+++.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~rl~~La~el--~~~~i~---~l~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQERLQELQAEL--GGGKIL---SLEEALPEADIVVWVASM  225 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHHHHHHHHHHh--ccccHH---hHHHHHccCCEEEECCcC
Confidence            3457899999999999999999998642 3 68999999887776654432  224443   466888999999999986

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.20  E-value=4.9e-06  Score=74.69  Aligned_cols=75  Identities=15%  Similarity=0.115  Sum_probs=59.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCC---chhhhc----C---CCCcEEEccCCCcccHHHHhcCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTE---ESKQKI----G---GADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~---~~~~~l----~---~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      ..+++++|+|| |++|++++..|++.  |++ |+++.|+.   ++.+++    .   ....+..+|+.+.+.+.+.++.+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~--G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~  200 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALD--GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASS  200 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccC
Confidence            34678999998 89999999999999  886 99999986   444332    1   12456678998888888888899


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |+|||+...
T Consensus       201 DilINaTp~  209 (289)
T PRK12548        201 DILVNATLV  209 (289)
T ss_pred             CEEEEeCCC
Confidence            999998754

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.19  E-value=1.4e-05  Score=74.21  Aligned_cols=104  Identities=19%  Similarity=0.203  Sum_probs=70.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH-hcCCCEEEEcccCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA-IQGIDALIILTSAV  158 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag~~  158 (331)
                      .+++|.|.||||++|+.+++.|.++ |+++++.+.++.+..+.+.. .......|+.+.+.+... ++++|+||.+.+. 
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~-  114 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANH-PDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH-  114 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhC-CCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH-
Confidence            4578999999999999999999888 48899999986543322211 122233454433333322 5889999998862 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~  218 (331)
                                                    .....++..+ +.| .++|-.|+.+-.++.
T Consensus       115 ------------------------------~~s~~i~~~~-~~g-~~VIDlSs~fRl~~~  142 (381)
T PLN02968        115 ------------------------------GTTQEIIKAL-PKD-LKIVDLSADFRLRDI  142 (381)
T ss_pred             ------------------------------HHHHHHHHHH-hCC-CEEEEcCchhccCCc
Confidence                                          2356777776 355 589999988754443

>cd00704 MDH Malate dehydrogenase

Probab=98.16  E-value=1.4e-05  Score=72.60  Aligned_cols=106  Identities=19%  Similarity=0.091  Sum_probs=71.0

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCC-----CCeEEEEecCC--chhhhcCCCCcEEEccCCCc-----------ccHHHHh
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSE-----QYAARGLVRTE--ESKQKIGGADDLFIGDIRDS-----------NSIIPAI  145 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~-----g~~V~~l~R~~--~~~~~l~~~~~~v~~Dl~d~-----------~~~~~~l  145 (331)
                      ||.|+||+|.+|+.++..|+.++-     .++++++++++  +.       .+....|+.|.           ....+.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~-------~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA-------LEGVVMELQDCAFPLLKGVVITTDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc-------cceeeeehhhhcccccCCcEEecChHHHh
Confidence            699999999999999999987621     23588999876  32       22333344433           3456888


Q ss_pred             cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEcc
Q 046297          146 QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGS  211 (331)
Q Consensus       146 ~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS  211 (331)
                      +++|+|||+||.....+        .+       -.+.+..|....+.+.+.++++. -+-++.+-|
T Consensus        75 ~~aDiVVitAG~~~~~g--------~t-------R~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          75 KDVDVAILVGAFPRKPG--------ME-------RADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             CCCCEEEEeCCCCCCcC--------Cc-------HHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999999999743321        11       11223668888899999998884 554444333

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.15  E-value=2.6e-05  Score=70.98  Aligned_cols=108  Identities=19%  Similarity=0.077  Sum_probs=70.7

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCC-----CCeEEEEecCCchhhhcCCCCcEEEccCCCcc-----------cHHHHhcC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSE-----QYAARGLVRTEESKQKIGGADDLFIGDIRDSN-----------SIIPAIQG  147 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~-----g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~-----------~~~~~l~~  147 (331)
                      +|.|+|++|.+|++++..|...+-     .++++++++++....     .+....|+.|..           +..+.+++
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-----a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~   75 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-----LEGVVMELMDCAFPLLDGVVPTHDPAVAFTD   75 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-----cceeEeehhcccchhcCceeccCChHHHhCC
Confidence            589999999999999999987510     236889998654310     222333443332           44678899


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEcc
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGS  211 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS  211 (331)
                      +|+||++||.....        ..+...       ....|+...+.+.+.++++. -+-++.+-|
T Consensus        76 aDiVVitAG~~~~~--------~~tr~~-------ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        76 VDVAILVGAFPRKE--------GMERRD-------LLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             CCEEEEcCCCCCCC--------CCcHHH-------HHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            99999999973321        111122       23678888999999999884 544444433

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.14  E-value=3.9e-05  Score=66.28  Aligned_cols=66  Identities=15%  Similarity=0.108  Sum_probs=47.8

Q ss_pred             EEE-CCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh-------cCCCEEEEcccC
Q 046297           86 LVT-GAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI-------QGIDALIILTSA  157 (331)
Q Consensus        86 lVt-GatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l-------~~~d~Vi~~ag~  157 (331)
                      .|+ .++|+||++++++|+++  |++|++++|... ..   . .....+|+.+.+.+.+++       .++|++|||||.
T Consensus        18 ~itN~SSGgIG~AIA~~la~~--Ga~Vvlv~~~~~-l~---~-~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSA--GHEVTLVTTKRA-LK---P-EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHC--CCEEEEEcChhh-cc---c-ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            445 45899999999999999  999999886321 11   1 112357888877666554       368999999996


Q ss_pred             C
Q 046297          158 V  158 (331)
Q Consensus       158 ~  158 (331)
                      .
T Consensus        91 ~   91 (227)
T TIGR02114        91 S   91 (227)
T ss_pred             c
Confidence            4

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.13  E-value=5.1e-06  Score=73.48  Aligned_cols=77  Identities=10%  Similarity=0.129  Sum_probs=61.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC--CcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA--DDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~--~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      ..++|.||+||.|..++++|+.+  |.+-.+-.|+..+++.+...  .++-..++.+++.+.+.+.+.++|+||+|+...
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~--g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~   84 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLARE--GLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTR   84 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHc--CCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEeccccccc
Confidence            35899999999999999999999  99998899999888764321  233334444588899999999999999997554


Q ss_pred             C
Q 046297          161 M  161 (331)
Q Consensus       161 ~  161 (331)
                      .
T Consensus        85 ~   85 (382)
T COG3268          85 Y   85 (382)
T ss_pred             c
Confidence            4

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.01  E-value=2.8e-05  Score=74.43  Aligned_cols=71  Identities=18%  Similarity=0.299  Sum_probs=62.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      |+|+|+|+ |.+|+++++.|.++  |++|++++++++..+.+..  .+.++.+|..+++.+.++ ++++|.|+.+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~--g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGE--NNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            57999997 99999999999999  9999999999887776643  478999999999989888 789999998865

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.97  E-value=0.00011  Score=66.86  Aligned_cols=161  Identities=14%  Similarity=0.045  Sum_probs=94.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-------eEEEEecCCch--hhh----cCCCCcEEEccCCCcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-------AARGLVRTEES--KQK----IGGADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-------~V~~l~R~~~~--~~~----l~~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      .+||.|+|++|.+|..++..|+..  +.       ++++++.+++.  ...    +.+.......+..-.....+.++++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da   79 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASG--EMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDA   79 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhc--cccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCC
Confidence            358999999999999999999987  44       78888885432  221    1110100000100011234678999


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC-CeEEEEccCCC------CCCCCC-
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA-KQIVLVGSMGG------TNLNHP-  220 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-k~~v~~SS~~~------~~~~~~-  220 (331)
                      |+||.+||.....+        .+-       .+....|....+.+.+.+++++- .-++.+-|--+      .....+ 
T Consensus        80 DivvitaG~~~k~g--------~tR-------~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~  144 (322)
T cd01338          80 DWALLVGAKPRGPG--------MER-------ADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPD  144 (322)
T ss_pred             CEEEEeCCCCCCCC--------CcH-------HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCC
Confidence            99999999743321        111       11236688888889999988773 44444443211      000111 


Q ss_pred             CCCCCcchHHHHHHHHHHHH----HhcCCCEEEEecCcccCCCcc
Q 046297          221 LNSLGNGNILVWKRKAEQYL----ADSGIPYTIIRAGGLQDKEGG  261 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~----~~~~~~~~ilrp~~v~g~~~~  261 (331)
                      +++.  +.|+.++...+++.    +..+++...+|..+|||+++.
T Consensus       145 ~p~~--~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         145 IPPD--NFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             CChH--heEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence            1111  23445555555433    357899999999999998743

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.93  E-value=9.8e-05  Score=56.62  Aligned_cols=69  Identities=29%  Similarity=0.437  Sum_probs=57.2

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      |+|.|. |.+|..+++.|.+.  +++|++++++++..+.+. ..+.++.+|.+|++.+.++ +++++.|+-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~--~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEG--GIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHT--TSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhC--CCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            578886 89999999999998  889999999988876653 4589999999999988875 468999998875

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.92  E-value=7e-06  Score=65.49  Aligned_cols=105  Identities=14%  Similarity=0.038  Sum_probs=71.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-----C--CCcEEEccCCCcccHHHHhcCCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-----G--ADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-----~--~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      +||.|+|++|.+|++++..|+..+...+++++++++++.+..    .     .  ...+..   .    ..+.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~----~~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---G----DYEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---S----SGGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---c----cccccccccEE
Confidence            589999999999999999999986567899999987544321    0     1  112222   1    23457899999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      |..+|.....+.        +-       .+..+.|....+.+.+.+++.+-+-++.+
T Consensus        74 vitag~~~~~g~--------sR-------~~ll~~N~~i~~~~~~~i~~~~p~~~viv  116 (141)
T PF00056_consen   74 VITAGVPRKPGM--------SR-------LDLLEANAKIVKEIAKKIAKYAPDAIVIV  116 (141)
T ss_dssp             EETTSTSSSTTS--------SH-------HHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred             EEeccccccccc--------cH-------HHHHHHhHhHHHHHHHHHHHhCCccEEEE
Confidence            999997433211        11       11226688888889998888875544443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.91  E-value=6.2e-05  Score=58.37  Aligned_cols=95  Identities=15%  Similarity=0.191  Sum_probs=57.9

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhhcCCC----CcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQKIGGA----DDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~l~~~----~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      ||.|+||||++|+.+++.|++. |.++++.+..+.. .-..+...    .......+.+ . -.+.+.++|+||.+.+. 
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dvvf~a~~~-   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-A-DPEELSDVDVVFLALPH-   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-T-SGHHHTTESEEEE-SCH-
T ss_pred             CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeeccccCCeeehhccccccccceeEee-c-chhHhhcCCEEEecCch-
Confidence            6899999999999999999995 4788776555443 22221111    0111111111 1 11234899999999852 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                    .....+.+.+.+.|+ ++|=.|+..
T Consensus        77 ------------------------------~~~~~~~~~~~~~g~-~ViD~s~~~  100 (121)
T PF01118_consen   77 ------------------------------GASKELAPKLLKAGI-KVIDLSGDF  100 (121)
T ss_dssp             ------------------------------HHHHHHHHHHHHTTS-EEEESSSTT
T ss_pred             ------------------------------hHHHHHHHHHhhCCc-EEEeCCHHH
Confidence                                          235677777788887 666555544

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.90  E-value=5.7e-06  Score=65.54  Aligned_cols=73  Identities=22%  Similarity=0.212  Sum_probs=55.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchhhhcCCC---CcEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESKQKIGGA---DDLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~~~l~~~---~~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      +...++|+|.|+ |..|+.++..|.+.  |.+ |+++.|+.++.+.+...   ..+-..++   +++.+.+.++|+||++
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~--g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~---~~~~~~~~~~DivI~a   82 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAAL--GAKEITIVNRTPERAEALAEEFGGVNIEAIPL---EDLEEALQEADIVINA   82 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHT--TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG---GGHCHHHHTESEEEE-
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHcCccccceeeH---HHHHHHHhhCCeEEEe
Confidence            345789999997 99999999999999  886 99999998887665332   22333343   3455778899999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      .+.
T Consensus        83 T~~   85 (135)
T PF01488_consen   83 TPS   85 (135)
T ss_dssp             SST
T ss_pred             cCC
Confidence            875

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.84  E-value=7.7e-05  Score=76.93  Aligned_cols=75  Identities=20%  Similarity=0.204  Sum_probs=62.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCe-------------EEEEecCCchhhhcCC---CCcEEEccCCCcccHHHH
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYA-------------ARGLVRTEESKQKIGG---ADDLFIGDIRDSNSIIPA  144 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-------------V~~l~R~~~~~~~l~~---~~~~v~~Dl~d~~~~~~~  144 (331)
                      .+++|+|+|+ |++|+.+++.|.+.+ +++             |++.+++.++.+++..   ++..++.|+.|.+++.++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~-~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~  645 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVK-TISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY  645 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCc-CccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence            4679999997 999999999998763 544             8888888776665532   467899999999999999


Q ss_pred             hcCCCEEEEcccC
Q 046297          145 IQGIDALIILTSA  157 (331)
Q Consensus       145 l~~~d~Vi~~ag~  157 (331)
                      ++++|+||++...
T Consensus       646 v~~~DaVIsalP~  658 (1042)
T PLN02819        646 VSQVDVVISLLPA  658 (1042)
T ss_pred             hcCCCEEEECCCc
Confidence            9999999999864

>PRK04148 hypothetical protein; Provisional

Probab=97.84  E-value=0.00019  Score=56.14  Aligned_cols=91  Identities=19%  Similarity=0.153  Sum_probs=72.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      .++|+++|. | .|.++++.|.+.  |++|++++.+++..+.... .+.++.+|+.+++.  +.-+++|.|+.+--    
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~--G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysirp----   86 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKES--GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRP----   86 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeCC----
Confidence            467999995 5 899999999999  9999999999987665433 47899999998873  45578999997743    


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEE
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVL  208 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~  208 (331)
                                                -.+-...+++.|++.++.-+|.
T Consensus        87 --------------------------p~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         87 --------------------------PRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             --------------------------CHHHHHHHHHHHHHcCCCEEEE
Confidence                                      2344678999999999876665

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.84  E-value=0.00017  Score=66.11  Aligned_cols=93  Identities=24%  Similarity=0.305  Sum_probs=62.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC---eEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY---AARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~---~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +++|+|.||||++|+.+++.|.++  +|   +++.+.|..+..+.+. ........|+.+.     .++++|+||.+++.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~--~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~   73 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEER--NFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGG   73 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCCh
Confidence            368999999999999999999997  55   5588887654333321 1134444455431     34689999999873


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                     .....+++...+.|+ .+|=.|+..
T Consensus        74 -------------------------------g~s~~~~~~~~~~G~-~VIDlS~~~   97 (334)
T PRK14874         74 -------------------------------SVSKKYAPKAAAAGA-VVIDNSSAF   97 (334)
T ss_pred             -------------------------------HHHHHHHHHHHhCCC-EEEECCchh
Confidence                                           124566666667776 566556654

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.76  E-value=0.00021  Score=64.79  Aligned_cols=111  Identities=18%  Similarity=0.149  Sum_probs=68.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCC--chhhhcC----CCCcEE--EccCCCcccHHHHhcCCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTE--ESKQKIG----GADDLF--IGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~--~~~~~l~----~~~~~v--~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      |+|.|+|++|.+|..++..|+..  |+  +|++++|++  ++++...    ......  ..++.-..+. +.++++|+||
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~--g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiVi   77 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKE--DVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVI   77 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEE
Confidence            57999999999999999999998  65  599999954  3222111    000000  0122111223 3589999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEcc
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGS  211 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS  211 (331)
                      .++|.....+.        +.       .+..+.|..-.+.+++.+.+.+-+ .+|.+++
T Consensus        78 itag~p~~~~~--------~r-------~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          78 ITAGVPRKEGM--------SR-------LDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             EecCCCCCCCC--------CH-------HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99996332110        00       111255777788888888777544 4555554

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.72  E-value=0.0002  Score=65.93  Aligned_cols=99  Identities=11%  Similarity=0.055  Sum_probs=63.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEE-EccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLF-IGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v-~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +++|+|+||||++|+.+++.|.+. ++++++++.++.+..+.+.   +.+..+ ..++.+.+..  .++++|+|+.+...
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~-p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNH-PEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcC-CCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc
Confidence            478999999999999999999986 4889888776433222221   111111 2233333332  45789999998752


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGT  215 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~  215 (331)
                                                     .....++..+.++|+ ++|=.|+..-.
T Consensus        79 -------------------------------~~~~~~v~~a~~aG~-~VID~S~~fR~  104 (343)
T PRK00436         79 -------------------------------GVSMDLAPQLLEAGV-KVIDLSADFRL  104 (343)
T ss_pred             -------------------------------HHHHHHHHHHHhCCC-EEEECCcccCC
Confidence                                           124566777777774 77777776544

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.72  E-value=0.00035  Score=61.65  Aligned_cols=67  Identities=19%  Similarity=0.216  Sum_probs=47.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ++|.|+|++|.+|+.+++.+.+. ++.++++ +++++++....      -..++...+++.++++++|+|+++..
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~~~~~~~------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPGSPLVGQ------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCcccccc------CCCCccccCCHHHhccCCCEEEECCC
Confidence            68999999999999999888875 3788887 44554433222      12244445667777778999998874

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.71  E-value=0.00023  Score=68.16  Aligned_cols=73  Identities=25%  Similarity=0.376  Sum_probs=60.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      .+++|+|.|+ |.+|+.+++.|.+.  |++|++++++++..+.+.   .++.++.+|..+++.+.++ ++++|+|+-+..
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~--~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~  306 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKE--GYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN  306 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence            3678999998 99999999999999  999999999988766553   2477899999999888654 468999987654

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.69  E-value=0.00025  Score=65.37  Aligned_cols=98  Identities=13%  Similarity=0.050  Sum_probs=62.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCch---hhhcCCCCcEE-EccCCCcccHHHHhcCCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEES---KQKIGGADDLF-IGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~---~~~l~~~~~~v-~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ++|.|+||||++|..+++.|.+. |+++++.+ +++...   .....+.+... ..++.+. +..++++++|+||.+.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~h-P~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNH-PEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC-CCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence            47999999999999999999976 48888854 544321   11111211111 1112211 234455689999998863


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~  214 (331)
                                                     .....++..+.+.| +++|=.|+..-
T Consensus        79 -------------------------------~~s~~~~~~~~~~G-~~VIDlS~~fR  103 (346)
T TIGR01850        79 -------------------------------GVSAELAPELLAAG-VKVIDLSADFR  103 (346)
T ss_pred             -------------------------------hHHHHHHHHHHhCC-CEEEeCChhhh
Confidence                                           12567777777777 58888888753

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.69  E-value=0.00011  Score=57.15  Aligned_cols=89  Identities=18%  Similarity=0.242  Sum_probs=57.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhhh-----cCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQK-----IGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~-----l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ++|+|.|++|.+|+.+++.+.+.+ ++++.+ ++|+++....     +.. ..  ...+.-.+++.++++.+|+||.+..
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~-~~~lv~~v~~~~~~~~g~d~g~~~~-~~--~~~~~v~~~l~~~~~~~DVvIDfT~   76 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESP-GFELVGAVDRKPSAKVGKDVGELAG-IG--PLGVPVTDDLEELLEEADVVIDFTN   76 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHST-TEEEEEEEETTTSTTTTSBCHHHCT-SS--T-SSBEBS-HHHHTTH-SEEEEES-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcC-CcEEEEEEecCCcccccchhhhhhC-cC--CcccccchhHHHhcccCCEEEEcCC
Confidence            479999999999999999999953 888775 5555422111     100 00  1122223667888888999999873


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeE
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQI  206 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~  206 (331)
                                                     -..+...++.|.++|+.-+
T Consensus        77 -------------------------------p~~~~~~~~~~~~~g~~~V   95 (124)
T PF01113_consen   77 -------------------------------PDAVYDNLEYALKHGVPLV   95 (124)
T ss_dssp             -------------------------------HHHHHHHHHHHHHHT-EEE
T ss_pred             -------------------------------hHHhHHHHHHHHhCCCCEE
Confidence                                           3456778888888887333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.65  E-value=0.0011  Score=52.39  Aligned_cols=96  Identities=18%  Similarity=0.164  Sum_probs=65.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh--------------------------cCCC--CcEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK--------------------------IGGA--DDLFI  132 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~--------------------------l~~~--~~~v~  132 (331)
                      .++|+|.|+ |.+|+.+++.|...  |. ++++++.+.=..+.                          +.+.  ++.+.
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~--Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~   78 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARS--GVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP   78 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHH--TTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHh--CCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee
Confidence            357999996 99999999999999  87 57777764311111                          1122  34455


Q ss_pred             ccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          133 GDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       133 ~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      .++ +.+.+.+.++++|+||.+..                              +......+-+.|++.+. .+|..+..
T Consensus        79 ~~~-~~~~~~~~~~~~d~vi~~~d------------------------------~~~~~~~l~~~~~~~~~-p~i~~~~~  126 (135)
T PF00899_consen   79 EKI-DEENIEELLKDYDIVIDCVD------------------------------SLAARLLLNEICREYGI-PFIDAGVN  126 (135)
T ss_dssp             SHC-SHHHHHHHHHTSSEEEEESS------------------------------SHHHHHHHHHHHHHTT--EEEEEEEE
T ss_pred             ccc-ccccccccccCCCEEEEecC------------------------------CHHHHHHHHHHHHHcCC-CEEEEEee
Confidence            555 44567788889999999875                              34455677788898886 67776654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.65  E-value=0.00056  Score=62.71  Aligned_cols=97  Identities=16%  Similarity=0.146  Sum_probs=66.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCch---------------------h-------hhcCCC--Cc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEES---------------------K-------QKIGGA--DD  129 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~---------------------~-------~~l~~~--~~  129 (331)
                      ..++|+|+|+ |.+|+++++.|.+.  |. ++++++++.-.                     .       .++.+.  ++
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~a--Gvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRA--GIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            4578999997 88999999999999  87 78888886311                     0       111222  44


Q ss_pred             EEEccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          130 LFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       130 ~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      .+..|++ ++.+.++++++|+||.+..                              |...-..+-++|++.+++ +|+.
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D------------------------------~~~~r~~in~~~~~~~ip-~i~~  147 (338)
T PRK12475        100 PVVTDVT-VEELEELVKEVDLIIDATD------------------------------NFDTRLLINDLSQKYNIP-WIYG  147 (338)
T ss_pred             EEeccCC-HHHHHHHhcCCCEEEEcCC------------------------------CHHHHHHHHHHHHHcCCC-EEEE
Confidence            5555664 4467888899999999874                              333344566778888874 5554


Q ss_pred             ccC
Q 046297          210 GSM  212 (331)
Q Consensus       210 SS~  212 (331)
                      +..
T Consensus       148 ~~~  150 (338)
T PRK12475        148 GCV  150 (338)
T ss_pred             Eec
Confidence            443

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.61  E-value=0.00023  Score=64.60  Aligned_cols=71  Identities=15%  Similarity=0.128  Sum_probs=49.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-----------C-CC------cEEEccCCCcccHHHH
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-----------G-AD------DLFIGDIRDSNSIIPA  144 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-----------~-~~------~~v~~Dl~d~~~~~~~  144 (331)
                      ++|.|+| .|.+|..++..|+++  |++|++.+|+++..+...           . +.      ......+.-..++.++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~--G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a   79 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARA--GHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA   79 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHC--CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence            5799999 699999999999999  999999999976544311           1 10      0000111122356677


Q ss_pred             hcCCCEEEEccc
Q 046297          145 IQGIDALIILTS  156 (331)
Q Consensus       145 l~~~d~Vi~~ag  156 (331)
                      ++++|+|+.+..
T Consensus        80 ~~~ad~Vi~avp   91 (308)
T PRK06129         80 VADADYVQESAP   91 (308)
T ss_pred             hCCCCEEEECCc
Confidence            889999999874

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.61  E-value=0.00047  Score=62.49  Aligned_cols=103  Identities=18%  Similarity=0.109  Sum_probs=68.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhhhcCCC-----------CcEEEccCCCcccHHHHhcCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQKIGGA-----------DDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~~l~~~-----------~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      ++|.|+|+ |.+|+.++..|+..  |  +++++++|++++.+.+...           ..+. .     .+. +.++++|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~--g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~-----~~~-~~l~~aD   70 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQ--GIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A-----GDY-SDCKDAD   70 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhc--CCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c-----CCH-HHhCCCC
Confidence            37999996 99999999999999  6  6899999988765543221           1111 1     122 3468999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      +||+++|.....+.               +-.+..+.|....+.+.+.+++++-+-++.+-
T Consensus        71 IVIitag~~~~~g~---------------~R~dll~~N~~i~~~~~~~i~~~~~~~~vivv  116 (306)
T cd05291          71 IVVITAGAPQKPGE---------------TRLDLLEKNAKIMKSIVPKIKASGFDGIFLVA  116 (306)
T ss_pred             EEEEccCCCCCCCC---------------CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            99999997433211               01122366777788888888888655444433

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.59  E-value=0.00036  Score=66.76  Aligned_cols=70  Identities=24%  Similarity=0.368  Sum_probs=54.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hh----hhcCC-CCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SK----QKIGG-ADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~----~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      +..++|+|+|+++ +|..+++.|+++  |++|++++++.. ..    +++.. ++.++.+|..+     +.+.++|+||+
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~   74 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKL--GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVV   74 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEE
Confidence            3468899999866 999999999999  999999999752 22    22322 47788888765     34568999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus        75 ~~g~   78 (450)
T PRK14106         75 SPGV   78 (450)
T ss_pred             CCCC
Confidence            9986

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.59  E-value=0.00032  Score=64.72  Aligned_cols=39  Identities=28%  Similarity=0.326  Sum_probs=31.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES  120 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~  120 (331)
                      ++++|+|+||+|++|+.+++.|++. +..+++.+.++.+.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~-p~~el~~~~~s~~~   40 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANH-PWFEVTALAASERS   40 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcC-CCceEEEEEcChhh
Confidence            4578999999999999999999976 36688888665433

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.56  E-value=0.00096  Score=61.19  Aligned_cols=97  Identities=19%  Similarity=0.214  Sum_probs=66.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchh----------------------------hhcCCC--Cc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESK----------------------------QKIGGA--DD  129 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~----------------------------~~l~~~--~~  129 (331)
                      ...+|+|+|+ |++|+.+++.|.+.  |. ++++++++.-..                            .++.+.  ++
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~a--Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRA--GVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            4578999997 99999999999999  87 788888763111                            111222  34


Q ss_pred             EEEccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          130 LFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       130 ~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      .+..|++ ++.+.++++++|+||.+..                              |......+-++|.+.++ .+|+.
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D------------------------------n~~~r~~ln~~~~~~~i-P~i~~  147 (339)
T PRK07688        100 AIVQDVT-AEELEELVTGVDLIIDATD------------------------------NFETRFIVNDAAQKYGI-PWIYG  147 (339)
T ss_pred             EEeccCC-HHHHHHHHcCCCEEEEcCC------------------------------CHHHHHHHHHHHHHhCC-CEEEE
Confidence            4445554 3456777889999998864                              44445567788888886 56665


Q ss_pred             ccC
Q 046297          210 GSM  212 (331)
Q Consensus       210 SS~  212 (331)
                      +..
T Consensus       148 ~~~  150 (339)
T PRK07688        148 ACV  150 (339)
T ss_pred             eee
Confidence            544

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.56  E-value=0.00032  Score=57.37  Aligned_cols=66  Identities=18%  Similarity=0.252  Sum_probs=50.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |++|.++|- |-+|+.+++.|+++  ||+|++.+|++++.+.+...- ...     .++..++++++|+|+-+..
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~g-~~~-----~~s~~e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKA--GYEVTVYDRSPEKAEALAEAG-AEV-----ADSPAEAAEQADVVILCVP   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHT--TTEEEEEESSHHHHHHHHHTT-EEE-----ESSHHHHHHHBSEEEE-SS
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhc--CCeEEeeccchhhhhhhHHhh-hhh-----hhhhhhHhhcccceEeecc
Confidence            478999995 99999999999999  999999999988877764432 222     2446677888899998875

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.54  E-value=0.0012  Score=55.98  Aligned_cols=97  Identities=15%  Similarity=0.162  Sum_probs=64.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCch--------------------------hhhcCCCCcE--E
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEES--------------------------KQKIGGADDL--F  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~--------------------------~~~l~~~~~~--v  131 (331)
                      ...+|+|.|+ |.+|+++++.|...  |. ++++++++.-.                          +.++.+.+++  +
T Consensus        20 ~~~~VlviG~-GglGs~ia~~La~~--Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        20 LNSHVLIIGA-GGLGSPAALYLAGA--GVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             cCCCEEEECC-CHHHHHHHHHHHHc--CCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            4678999995 99999999999999  76 78888876211                          1111222322  2


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ..++ +++.+.+.++++|+||.+..                              |...-..+-+.|+++++ .+|+.+.
T Consensus        97 ~~~i-~~~~~~~~~~~~D~Vi~~~d------------------------------~~~~r~~l~~~~~~~~i-p~i~~~~  144 (202)
T TIGR02356        97 KERV-TAENLELLINNVDLVLDCTD------------------------------NFATRYLINDACVALGT-PLISAAV  144 (202)
T ss_pred             hhcC-CHHHHHHHHhCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            2333 33456778889999998864                              34444557778888886 5666554


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       145 ~  145 (202)
T TIGR02356       145 V  145 (202)
T ss_pred             c
Confidence            3

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.50  E-value=0.00084  Score=61.41  Aligned_cols=95  Identities=20%  Similarity=0.207  Sum_probs=58.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhc-CCCCeEEEEecCCchhh-hcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVRTEESKQ-KIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R~~~~~~-~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      +++|+|+||||++|+.+++.|.++ .|..++..+... ++.. .+.-..  ...++.+.+.. + ++++|+||-+++.  
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~~~~--~~l~~~~~~~~-~-~~~vD~vFla~p~--   76 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVPFAG--KNLRVREVDSF-D-FSQVQLAFFAAGA--   76 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeeccCC--cceEEeeCChH-H-hcCCCEEEEcCCH--
Confidence            368999999999999999999986 122344444333 2221 111111  23344333322 2 5789999988762  


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                   .....+++.+.++|+ ++|=.|+..
T Consensus        77 -----------------------------~~s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         77 -----------------------------AVSRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             -----------------------------HHHHHHHHHHHHCCC-eEEECchhh
Confidence                                         113557888888887 566666654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.43  E-value=0.00082  Score=60.70  Aligned_cols=110  Identities=17%  Similarity=0.095  Sum_probs=69.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh--cCCCCc--EEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK--IGGADD--LFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~--l~~~~~--~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      +||.|+|++|.+|++++-.|+.++.-.++++++.+..+...  +.+...  .+.+ ....+++.+.++++|+||..||..
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~-~~~~~~~y~~~~daDivvitaG~~   79 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTG-YLGPEELKKALKGADVVVIPAGVP   79 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEE-ecCCCchHHhcCCCCEEEEeCCCC
Confidence            58999999999999999999888222578888887111111  111110  1111 102234667889999999999974


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEE
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVL  208 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~  208 (331)
                      ...+.        +       -.+..+.|....+.+.+..++++-+-++.
T Consensus        80 ~k~g~--------t-------R~dll~~N~~i~~~i~~~i~~~~p~a~vi  114 (310)
T cd01337          80 RKPGM--------T-------RDDLFNINAGIVRDLATAVAKACPKALIL  114 (310)
T ss_pred             CCCCC--------C-------HHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence            33211        1       11223668888888888888887554443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.43  E-value=0.00074  Score=66.90  Aligned_cols=72  Identities=21%  Similarity=0.307  Sum_probs=61.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      ..+|+|.|. |.+|+.+++.|.++  |++++++++++++.+.+. .+..++.+|.+|++.++++ ++++|+++-+..
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMAN--KMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence            457899985 99999999999999  999999999998877654 3578999999999988776 568999988865

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.43  E-value=0.00043  Score=61.92  Aligned_cols=71  Identities=15%  Similarity=0.101  Sum_probs=50.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCC----cEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGAD----DLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~----~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ...++|+|.|+ |+.|++++..|.+.  |. +|+++.|+.++.+.+...+    ..+.  +...+++.+.++++|+||++
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~--G~~~I~I~nR~~~ka~~la~~l~~~~~~~~--~~~~~~~~~~~~~aDiVIna  199 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTL--GVERLTIFDVDPARAAALADELNARFPAAR--ATAGSDLAAALAAADGLVHA  199 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHhhCCCeE--EEeccchHhhhCCCCEEEEC
Confidence            34678999996 88999999999999  87 7999999987766543211    1111  11123345567889999999


Q ss_pred             c
Q 046297          155 T  155 (331)
Q Consensus       155 a  155 (331)
                      .
T Consensus       200 T  200 (284)
T PRK12549        200 T  200 (284)
T ss_pred             C
Confidence            4

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.39  E-value=0.001  Score=61.10  Aligned_cols=67  Identities=25%  Similarity=0.443  Sum_probs=45.3

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEE---EEecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAAR---GLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~---~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +|+|+||||++|+.+++.|.++  +|.++   .+.+..+..+.+. .....+..|+.     ...++++|+||.++|.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~--~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEER--NFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGG   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhC--CCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCH
Confidence            5899999999999999999887  66544   4446543322221 12345555553     2245789999999974

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.39  E-value=0.00025  Score=57.35  Aligned_cols=71  Identities=21%  Similarity=0.117  Sum_probs=51.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCCCCc--EEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGGADD--LFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~~~~--~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..++|+|+|+ |.+|..+++.|.+.  | ++|++++|++++.+++.....  .+..+..+   ..+.++++|+||++...
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~--g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~   91 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAEL--GAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPV   91 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCC
Confidence            3578999997 99999999999998  5 789999998876655432211  11223333   34457899999999975

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.38  E-value=0.0026  Score=50.68  Aligned_cols=95  Identities=16%  Similarity=0.190  Sum_probs=62.2

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCCC--cEEEcc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGAD--DLFIGD  134 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~~--~~v~~D  134 (331)
                      +|+|.|+ |.+|+++++.|...  |. ++++++.+.-..+                          ++.+.+  +.+..+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~--Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~   77 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARS--GVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEG   77 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHC--CCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeee
Confidence            4899997 99999999999999  87 5777775421110                          112222  233333


Q ss_pred             CCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          135 IRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       135 l~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      +.+. ...+.++++|+||.+..                              +......+.+.|+++++ .+|..++.+
T Consensus        78 ~~~~-~~~~~~~~~diVi~~~d------------------------------~~~~~~~l~~~~~~~~i-~~i~~~~~g  124 (143)
T cd01483          78 ISED-NLDDFLDGVDLVIDAID------------------------------NIAVRRALNRACKELGI-PVIDAGGLG  124 (143)
T ss_pred             cChh-hHHHHhcCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence            3332 23566788999998875                              34556678888999886 566655543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.36  E-value=0.0014  Score=59.64  Aligned_cols=113  Identities=17%  Similarity=0.071  Sum_probs=70.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-------eEEEEecCCch--hhh----cCCCCcEEEccCCCcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-------AARGLVRTEES--KQK----IGGADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-------~V~~l~R~~~~--~~~----l~~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      ..||.|+|++|++|+.++..|+..  +.       +++++++++..  ...    +.+.......+..-...-.+.++++
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da   80 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASG--ELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDV   80 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhC--CcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCC
Confidence            458999999999999999999988  53       78889886421  221    1111101111111112334678899


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC-CeEEEEcc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA-KQIVLVGS  211 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-k~~v~~SS  211 (331)
                      |+||..||.....+        .+-       .+....|....+.+.+.+++++- +-++.+-|
T Consensus        81 DvVVitAG~~~k~g--------~tR-------~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        81 DAALLVGAFPRKPG--------MER-------ADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             CEEEEeCCCCCCCC--------CcH-------HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            99999999743321        111       11236688888899999988875 54444444

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.34  E-value=0.0011  Score=65.18  Aligned_cols=72  Identities=14%  Similarity=0.192  Sum_probs=60.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      +.+|+|.|+ |.+|+++++.|.++  |++|+++++++++.+++.+ ....+.+|.+|++.++++ ++++|.++-+.+
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~--g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~  490 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAA--GIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIP  490 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence            356899986 99999999999999  9999999999888776543 588999999999988765 468898887764

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.32  E-value=0.0016  Score=58.86  Aligned_cols=111  Identities=19%  Similarity=0.102  Sum_probs=69.7

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh--cCCCC--cEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK--IGGAD--DLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~--l~~~~--~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      ||.|+|++|.+|++++-.|+.++...+++++++++.....  +.+..  .-+.+ ..+.+++.+.++++|+||..+|...
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~-~~~~~~~~~~~~daDivvitaG~~~   79 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKG-FSGEEGLENALKGADVVVIPAGVPR   79 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEE-ecCCCchHHHcCCCCEEEEeCCCCC
Confidence            5899999999999999999988323479999987622111  11111  01111 0012235678999999999999743


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      ....        +       -.+....|....+.+.+..++++-+-++.+-
T Consensus        80 ~~g~--------~-------R~dll~~N~~I~~~i~~~i~~~~p~~iiivv  115 (312)
T TIGR01772        80 KPGM--------T-------RDDLFNVNAGIVKDLVAAVAESCPKAMILVI  115 (312)
T ss_pred             CCCc--------c-------HHHHHHHhHHHHHHHHHHHHHhCCCeEEEEe
Confidence            3211        1       1122366888888888888888755444433

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.31  E-value=0.003  Score=53.99  Aligned_cols=98  Identities=14%  Similarity=0.137  Sum_probs=63.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC---chhh----------------------hcCCCC--cEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE---ESKQ----------------------KIGGAD--DLFI  132 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~---~~~~----------------------~l~~~~--~~v~  132 (331)
                      ...+|+|.|+ |.+|+++++.|.+.  |. ++++++.+.   +.+.                      ++.+.+  +.+.
T Consensus        27 ~~~~V~ViG~-GglGs~ia~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         27 KKAKVGIAGA-GGLGSNIAVALARS--GVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             hCCCEEEECc-CHHHHHHHHHHHHc--CCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            4568999996 99999999999999  76 488888762   1111                      111222  2333


Q ss_pred             ccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEcc
Q 046297          133 GDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGS  211 (331)
Q Consensus       133 ~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS  211 (331)
                      ..+.+ +.+.+.++++|+||.+..                              |...-..+.+.|.+. ++ .+|+.+.
T Consensus       104 ~~i~~-~~~~~~~~~~DvVI~a~D------------------------------~~~~r~~l~~~~~~~~~~-p~I~~~~  151 (212)
T PRK08644        104 EKIDE-DNIEELFKDCDIVVEAFD------------------------------NAETKAMLVETVLEHPGK-KLVAASG  151 (212)
T ss_pred             eecCH-HHHHHHHcCCCEEEECCC------------------------------CHHHHHHHHHHHHHhCCC-CEEEeeh
Confidence            33333 446677888999998853                              344455677888887 65 6666554


Q ss_pred             CC
Q 046297          212 MG  213 (331)
Q Consensus       212 ~~  213 (331)
                      .+
T Consensus       152 ~~  153 (212)
T PRK08644        152 MA  153 (212)
T ss_pred             hh
Confidence            43

>PRK08223 hypothetical protein; Validated

Probab=97.31  E-value=0.0039  Score=55.40  Aligned_cols=99  Identities=14%  Similarity=0.102  Sum_probs=63.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCCC--cEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGAD--DLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~~--~~v  131 (331)
                      ...+|+|.|+ |++|+.+++.|...  |. ++++++.+.-...                          ++.+.+  +.+
T Consensus        26 ~~s~VlIvG~-GGLGs~va~~LA~a--GVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         26 RNSRVAIAGL-GGVGGIHLLTLARL--GIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHh--CCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            3568999996 99999999999999  65 5666665431111                          112223  334


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ...++ ++.+.++++++|+|+.+.-                            ..++..-..+-++|+++++ .+|+.+.
T Consensus       103 ~~~l~-~~n~~~ll~~~DlVvD~~D----------------------------~~~~~~r~~ln~~c~~~~i-P~V~~~~  152 (287)
T PRK08223        103 PEGIG-KENADAFLDGVDVYVDGLD----------------------------FFEFDARRLVFAACQQRGI-PALTAAP  152 (287)
T ss_pred             ecccC-ccCHHHHHhCCCEEEECCC----------------------------CCcHHHHHHHHHHHHHcCC-CEEEEec
Confidence            44443 4557788889999986653                            1123444566778899886 5666443


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       153 ~  153 (287)
T PRK08223        153 L  153 (287)
T ss_pred             c
Confidence            3

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.30  E-value=0.0023  Score=55.40  Aligned_cols=97  Identities=19%  Similarity=0.154  Sum_probs=62.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCC--CcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGA--DDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~--~~~v  131 (331)
                      ...+|+|.|+ |.+|+++++.|...  |. ++++++.+.-...                          ++.+.  ++.+
T Consensus        20 ~~~~VlivG~-GglGs~va~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          20 KNARVLVVGA-GGLGSPAAEYLAAA--GVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            3578999995 99999999999999  76 5666654321111                          11122  3333


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ..++ +.+.+.+.++++|+||.+..                              |...-..+-+.|.++++ .+|+.+.
T Consensus        97 ~~~i-~~~~~~~~~~~~DvVi~~~d------------------------------~~~~r~~l~~~~~~~~i-p~i~~g~  144 (228)
T cd00757          97 NERL-DAENAEELIAGYDLVLDCTD------------------------------NFATRYLINDACVKLGK-PLVSGAV  144 (228)
T ss_pred             ccee-CHHHHHHHHhCCCEEEEcCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            3344 34556778889999999875                              33444567778888886 6666544


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       145 ~  145 (228)
T cd00757         145 L  145 (228)
T ss_pred             c
Confidence            3

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.30  E-value=0.0015  Score=61.68  Aligned_cols=163  Identities=15%  Similarity=0.075  Sum_probs=90.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhc-------CCCCeEEEEecCCchhhhc----CCCC-cEEEccCC-CcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKER-------SEQYAARGLVRTEESKQKI----GGAD-DLFIGDIR-DSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~-------~~g~~V~~l~R~~~~~~~l----~~~~-~~v~~Dl~-d~~~~~~~l~~~  148 (331)
                      .-+|.|+|++|.+|.+++-.|+..       +--.+++.+++++++.+..    .+.. .+. .++. ..+ -.+.++++
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~-~~v~i~~~-~ye~~kda  177 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLL-REVSIGID-PYEVFQDA  177 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhc-CceEEecC-CHHHhCcC
Confidence            458999999999999999999876       2224788999987765431    1111 000 1111 001 13567899


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH-cCCCeEEEEccCCC------C-C--CC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA-AGAKQIVLVGSMGG------T-N--LN  218 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~-~~vk~~v~~SS~~~------~-~--~~  218 (331)
                      |+||..+|.....+.               +-.+..+.|....+.+.+..++ ++-+-+|.+-|--+      . +  ..
T Consensus       178 DiVVitAG~prkpG~---------------tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg~  242 (444)
T PLN00112        178 EWALLIGAKPRGPGM---------------ERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAPN  242 (444)
T ss_pred             CEEEECCCCCCCCCC---------------CHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcCC
Confidence            999999997433211               1112236788888899999988 56444444433211      0 0  01


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcc
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG  261 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~  261 (331)
                      .+....+......+-+.-..+.++.+++...++-++|+|.++.
T Consensus       243 ~~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd  285 (444)
T PLN00112        243 IPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST  285 (444)
T ss_pred             CCcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC
Confidence            1111111111222222222233456777777777777776543

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.29  E-value=0.0036  Score=55.27  Aligned_cols=100  Identities=16%  Similarity=0.173  Sum_probs=64.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhh--------------------------cCCCCcEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQK--------------------------IGGADDLFIG  133 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~--------------------------l~~~~~~v~~  133 (331)
                      ...+|+|.|+ |.+|+++++.|.+.  | -++++++.+.-....                          +.+.+++...
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~--GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALART--GIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHc--CCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            4578999996 99999999999999  7 468887765311111                          1122222222


Q ss_pred             -cCCCcccHHHHhc-CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          134 -DIRDSNSIIPAIQ-GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       134 -Dl~d~~~~~~~l~-~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                       +.-+++.+.+.+. ++|+||.+..                              ++..-..+.++|+++++ .||.+.+
T Consensus       106 ~~~i~~e~~~~ll~~~~D~VIdaiD------------------------------~~~~k~~L~~~c~~~~i-p~I~~gG  154 (268)
T PRK15116        106 DDFITPDNVAEYMSAGFSYVIDAID------------------------------SVRPKAALIAYCRRNKI-PLVTTGG  154 (268)
T ss_pred             ecccChhhHHHHhcCCCCEEEEcCC------------------------------CHHHHHHHHHHHHHcCC-CEEEECC
Confidence             2224455666664 6898888875                              34445668889999886 6666555


Q ss_pred             CCC
Q 046297          212 MGG  214 (331)
Q Consensus       212 ~~~  214 (331)
                      +++
T Consensus       155 ag~  157 (268)
T PRK15116        155 AGG  157 (268)
T ss_pred             ccc
Confidence            543

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.28  E-value=0.003  Score=58.04  Aligned_cols=95  Identities=19%  Similarity=0.226  Sum_probs=57.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC---eEEEEecC--CchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY---AARGLVRT--EESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~---~V~~l~R~--~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .++|.|.||||++|..+++.|.++  +|   ++..+...  ..+.-... .......++.     .+.++++|+||.+++
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~--~hP~~~l~~las~rsaGk~~~~~-~~~~~v~~~~-----~~~~~~~D~vf~a~p   78 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDR--DFPYSSLKMLASARSAGKKVTFE-GRDYTVEELT-----EDSFDGVDIALFSAG   78 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhC--CCCcceEEEEEccCCCCCeeeec-CceeEEEeCC-----HHHHcCCCEEEECCC
Confidence            468999999999999999999987  55   44444333  22211111 1222222332     134578999998886


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~  216 (331)
                      .                               .....++..+.+.|+ ++|=.|+..-.+
T Consensus        79 ~-------------------------------~~s~~~~~~~~~~g~-~VIDlS~~fR~~  106 (344)
T PLN02383         79 G-------------------------------SISKKFGPIAVDKGA-VVVDNSSAFRME  106 (344)
T ss_pred             c-------------------------------HHHHHHHHHHHhCCC-EEEECCchhhcC
Confidence            3                               124556666666675 676667665333

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.27  E-value=0.00039  Score=62.12  Aligned_cols=73  Identities=21%  Similarity=0.242  Sum_probs=52.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCCCCcEE-EccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGGADDLF-IGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~~~~~v-~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...++|+|+|+ |.+|+.++..|.+.  | .+|+++.|+.++.+.+....... ..++ +. +..+.+.++|+||++...
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~--g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~~~~DivInaTp~  195 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDL--GVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEELADFDLIINATSA  195 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhccccCCEEEECCcC
Confidence            34678999997 99999999999999  8 78999999987766553322110 0112 11 234566789999999864

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.27  E-value=0.0015  Score=58.56  Aligned_cols=113  Identities=19%  Similarity=0.068  Sum_probs=73.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEE--ccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFI--GDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~--~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +||.|+|+ |+||+.++-.|+.+..+.++++++..++..+.    +.+...+..  ..+....+ .+.++++|+|+-.||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence            57999999 99999999999888556689999998544332    111111111  11111111 356789999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      .....+.       .        -.+..+.|....+.+.+...+.+-+-++.+-|-
T Consensus        79 ~prKpGm-------t--------R~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtN  119 (313)
T COG0039          79 VPRKPGM-------T--------RLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTN  119 (313)
T ss_pred             CCCCCCC-------C--------HHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecC
Confidence            7554331       0        112236678778888888888876656665554

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.26  E-value=0.00071  Score=56.37  Aligned_cols=66  Identities=8%  Similarity=0.124  Sum_probs=39.9

Q ss_pred             CCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHH----HhcCCCEEEEcccCCCC
Q 046297           89 GAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP----AIQGIDALIILTSAVPK  160 (331)
Q Consensus        89 GatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~----~l~~~d~Vi~~ag~~~~  160 (331)
                      -.||..|.+|+++++.+  |++|+.+..... .. .+..+..+.  +...+++.+    .++.+|++|++|+....
T Consensus        26 ~SSG~~G~~lA~~~~~~--Ga~V~li~g~~~-~~-~p~~~~~i~--v~sa~em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARR--GAEVTLIHGPSS-LP-PPPGVKVIR--VESAEEMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             S--SHHHHHHHHHHHHT--T-EEEEEE-TTS------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             CCcCHHHHHHHHHHHHC--CCEEEEEecCcc-cc-ccccceEEE--ecchhhhhhhhccccCcceeEEEecchhhe
Confidence            44799999999999999  999999998732 11 133455554  444444444    44578999999997543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.25  E-value=0.0013  Score=56.65  Aligned_cols=72  Identities=17%  Similarity=0.144  Sum_probs=49.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEE---ccCC-CcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFI---GDIR-DSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~---~Dl~-d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |+|.|+||+|.+|..+++.|.+.  |++|++.+|++++.+.+... ...+.   .+.. ...+..++++.+|+||-+.-
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~--G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp   77 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKA--GNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVP   77 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhC--CCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECC
Confidence            57999999999999999999999  99999999988766543221 00000   0000 01123566788999998874

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.22  E-value=0.0017  Score=64.52  Aligned_cols=72  Identities=22%  Similarity=0.256  Sum_probs=61.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      .++|+|.|. |.+|+.+++.|.++  |+++++++.++++.+.+. .+..++.+|.+|++.++++ ++++|.|+.+..
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSS--GVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID  473 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence            467999996 99999999999999  999999999998877664 3588999999999987754 468899988864

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.22  E-value=0.0048  Score=53.79  Aligned_cols=97  Identities=18%  Similarity=0.084  Sum_probs=62.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh--------------------------cCCCCcEEE-
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK--------------------------IGGADDLFI-  132 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~--------------------------l~~~~~~v~-  132 (331)
                      ...+|+|.|+ |.+|+.+++.|...  |. ++++++.+.-....                          +.+.+++.. 
T Consensus        23 ~~~~VlvvG~-GglGs~va~~La~~--Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        23 KASRVLIVGL-GGLGCAASQYLAAA--GVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHc--CCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            3568999996 99999999999999  65 57777765322111                          112233222 


Q ss_pred             -ccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          133 -GDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       133 -~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                       ..+ +.+.+.+.++++|+||.+..                              |......+-++|.+.++ .+|+.+.
T Consensus       100 ~~~i-~~~~~~~~~~~~DlVvd~~D------------------------------~~~~r~~ln~~~~~~~i-p~v~~~~  147 (240)
T TIGR02355       100 NAKL-DDAELAALIAEHDIVVDCTD------------------------------NVEVRNQLNRQCFAAKV-PLVSGAA  147 (240)
T ss_pred             eccC-CHHHHHHHhhcCCEEEEcCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence             222 33456777888999998874                              34444556678888886 5665444


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       148 ~  148 (240)
T TIGR02355       148 I  148 (240)
T ss_pred             c
Confidence            3

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.19  E-value=0.0014  Score=59.64  Aligned_cols=109  Identities=17%  Similarity=0.094  Sum_probs=69.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhc----CCCCcE-EEccCCCcccHHHHhcCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQKI----GGADDL-FIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l----~~~~~~-v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      .+||.|+|+ |.+|..++-.|+..  |.  ++++++++++..+..    ..-..+ ....+. .++. +.++++|+||..
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~--~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~~~~-~~~~~adivIit   80 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQ--GIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-AGDY-SDCKDADLVVIT   80 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhc--CCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-eCCH-HHhCCCCEEEEe
Confidence            468999998 99999999999988  65  799999987654321    110000 001111 1223 457899999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      +|.....+.        +.       .+..+.|....+.+++.+++++.+-++.+-
T Consensus        81 ag~~~k~g~--------~R-------~dll~~N~~i~~~i~~~i~~~~~~~~vivv  121 (315)
T PRK00066         81 AGAPQKPGE--------TR-------LDLVEKNLKIFKSIVGEVMASGFDGIFLVA  121 (315)
T ss_pred             cCCCCCCCC--------CH-------HHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            997433211        11       122366777788888888887755444333

>PRK08328 hypothetical protein; Provisional

Probab=97.17  E-value=0.0055  Score=53.15  Aligned_cols=34  Identities=24%  Similarity=0.149  Sum_probs=27.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRT  117 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~  117 (331)
                      ...+|+|.|+ |.+|+++++.|...  |. ++++++.+
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~--Gvg~i~lvD~D   60 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAA--GVGRILLIDEQ   60 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCC
Confidence            3568999996 99999999999999  65 57777654

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.16  E-value=0.0032  Score=57.72  Aligned_cols=72  Identities=15%  Similarity=0.183  Sum_probs=55.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEE--------cc-----CCCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFI--------GD-----IRDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~--------~D-----l~d~~~~~~~l~~~  148 (331)
                      |+|.|.| +|++|-...--|.+.  ||+|++++.++++.+.+..+ ..+++        -+     ++=..+..+++++.
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~--GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~a   77 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAEL--GHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDA   77 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcC
Confidence            5788888 799999999999999  99999999999988876543 11111        11     22345677888999


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |++|.+.|-
T Consensus        78 dv~fIavgT   86 (414)
T COG1004          78 DVVFIAVGT   86 (414)
T ss_pred             CEEEEEcCC
Confidence            999999985

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.15  E-value=0.02  Score=45.85  Aligned_cols=200  Identities=12%  Similarity=0.062  Sum_probs=102.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCC---cccH----HHHhc--CCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRD---SNSI----IPAIQ--GIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d---~~~~----~~~l~--~~d~Vi  152 (331)
                      ..+|+|.||-|-+|+.+++.+.++  +|-|.-++-.+.....   .-.++..|-+-   ++.+    .+.++  ++|.|+
T Consensus         3 agrVivYGGkGALGSacv~~Fkan--nywV~siDl~eNe~Ad---~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKAN--NYWVLSIDLSENEQAD---SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhc--CeEEEEEeeccccccc---ceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            457999999999999999999999  9999888876543211   12233333321   1222    22232  589999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccC-CCCCCCCCCCCCCcchHH
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSM-GGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~-~~~~~~~~~~~~~~~~y~  230 (331)
                      +.||-+.+...        .-...+++..-+..-.+.....-...+.++ ...-++.+..+ ...+....+     -.|+
T Consensus        78 CVAGGWAGGnA--------ksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgM-----IGYG  144 (236)
T KOG4022|consen   78 CVAGGWAGGNA--------KSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGM-----IGYG  144 (236)
T ss_pred             EeeccccCCCc--------chhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcc-----cchh
Confidence            99997665321        001111111001111222111111112222 22234444444 233333333     2488


Q ss_pred             HHHHHHHHHHHh-----cCCC----EEEEecCcccCCCcchhhhhccCCccccC-CcccccCHHHHHHHHHHHhcCcc--
Q 046297          231 VWKRKAEQYLAD-----SGIP----YTIIRAGGLQDKEGGIRELLVGKDDELLQ-TETRTIARADVAEVCIQALQFEE--  298 (331)
Q Consensus       231 ~sK~~~e~~~~~-----~~~~----~~ilrp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~i~v~Dva~~~~~~l~~~~--  298 (331)
                      ..|.++.++.+.     .|++    ...|-|-.+-.|.+.  .       -.|+ +...|+....+++-++.-.....  
T Consensus       145 MAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNR--K-------wMP~ADfssWTPL~fi~e~flkWtt~~~RP  215 (236)
T KOG4022|consen  145 MAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNR--K-------WMPNADFSSWTPLSFISEHFLKWTTETSRP  215 (236)
T ss_pred             HHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccc--c-------cCCCCcccCcccHHHHHHHHHHHhccCCCC
Confidence            999999988763     4443    344445444333321  0       1111 22456778888887777654422  


Q ss_pred             cCCceEEecc
Q 046297          299 AKFKAFDLAS  308 (331)
Q Consensus       299 ~~~~~~~i~~  308 (331)
                      ..|.-..+..
T Consensus       216 ssGsLlqi~T  225 (236)
T KOG4022|consen  216 SSGSLLQITT  225 (236)
T ss_pred             CCCceEEEEe
Confidence            3444455543

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=97.15  E-value=0.0046  Score=46.35  Aligned_cols=87  Identities=21%  Similarity=0.144  Sum_probs=61.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      ++++|||+|| |.+|..-++.|++.  |.+|++++...   ...++.+.+..-++      .+.+++++.||-+.+    
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~--gA~v~vis~~~---~~~~~~i~~~~~~~------~~~l~~~~lV~~at~----   69 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEA--GAKVTVISPEI---EFSEGLIQLIRREF------EEDLDGADLVFAATD----   69 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCC--TBEEEEEESSE---HHHHTSCEEEESS-------GGGCTTESEEEE-SS----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEECCch---hhhhhHHHHHhhhH------HHHHhhheEEEecCC----
Confidence            4788999998 99999999999999  99999999985   22224456555444      234788898886654    


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                                                |-.....+.+.|++.++  +|.+..
T Consensus        70 --------------------------d~~~n~~i~~~a~~~~i--~vn~~D   92 (103)
T PF13241_consen   70 --------------------------DPELNEAIYADARARGI--LVNVVD   92 (103)
T ss_dssp             ---------------------------HHHHHHHHHHHHHTTS--EEEETT
T ss_pred             --------------------------CHHHHHHHHHHHhhCCE--EEEECC
Confidence                                      23335678888888765  666553

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.13  E-value=0.0011  Score=55.33  Aligned_cols=72  Identities=22%  Similarity=0.305  Sum_probs=45.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEE-------------ccCCCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFI-------------GDIRDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~-------------~Dl~d~~~~~~~l~~~  148 (331)
                      |+|.|.| .|++|--++..|.+.  ||+|++++.++++.+.+..+ ..+.+             +.++=..++.++++++
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~--G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~a   77 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEK--GHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDA   77 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHT--TSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-
T ss_pred             CEEEEEC-CCcchHHHHHHHHhC--CCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhcc
Confidence            6799997 699999999999999  99999999999887776543 21211             1122223455556678


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |++|-|.+.
T Consensus        78 dv~~I~VpT   86 (185)
T PF03721_consen   78 DVVFICVPT   86 (185)
T ss_dssp             SEEEE----
T ss_pred             ceEEEecCC
Confidence            999999874

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.11  E-value=0.0039  Score=57.02  Aligned_cols=74  Identities=19%  Similarity=0.243  Sum_probs=50.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcc---cHHHHhc--CCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSN---SIIPAIQ--GIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~---~~~~~l~--~~d~Vi~~ag  156 (331)
                      ..+|||+||+|.+|...++.+...  |+.+++.+.++++.+.+...---...|..+.+   .+.++..  ++|+|+...|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~--G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKAL--GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHc--CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            678999999999999999999999  87777777776665544332221223344443   2222332  6999999998


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       221 ~  221 (326)
T COG0604         221 G  221 (326)
T ss_pred             H
Confidence            3

>PRK05442 malate dehydrogenase; Provisional

Probab=97.11  E-value=0.0039  Score=56.86  Aligned_cols=114  Identities=12%  Similarity=0.047  Sum_probs=67.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-----eEEEEecCCch--hhh----cCCCCcEEEccCCCcccHHHHhcCCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-----AARGLVRTEES--KQK----IGGADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-----~V~~l~R~~~~--~~~----l~~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      +.||.|+|++|.+|+.++-.|+..+--.     +++++++++..  ...    +.+.......+..=.....+.++++|+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~daDi   83 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDADV   83 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCCCE
Confidence            4689999999999999999998762112     78888885432  211    111010000011101223467889999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CC-eEEEEc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AK-QIVLVG  210 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk-~~v~~S  210 (331)
                      ||.+||.....+        .+-       .+....|....+.+.+.++++. -+ .++.+|
T Consensus        84 VVitaG~~~k~g--------~tR-------~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         84 ALLVGARPRGPG--------MER-------KDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             EEEeCCCCCCCC--------CcH-------HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999643321        111       1223668888888998888854 34 444444

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.11  E-value=0.0073  Score=51.06  Aligned_cols=98  Identities=16%  Similarity=0.165  Sum_probs=62.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCch----------------------------hhhcCCCC--cE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEES----------------------------KQKIGGAD--DL  130 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~----------------------------~~~l~~~~--~~  130 (331)
                      ..+|+|.|++| +|.++++.|...  |. ++++++.+.-.                            +.++.+.+  +.
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~--GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLA--GIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHc--CCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            56899999755 999999999999  76 47777754211                            11112223  33


Q ss_pred             EEccCCC-cccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          131 FIGDIRD-SNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       131 v~~Dl~d-~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +..++.+ .+...+.++++|+||.+..                              +......+-+.|+++++ .+|+.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d------------------------------~~~~~~~ln~~c~~~~i-p~i~~  144 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATEE------------------------------NYERTAKVNDVCRKHHI-PFISC  144 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEE
Confidence            3334432 3445667788999987743                              34445567788899887 66666


Q ss_pred             ccCC
Q 046297          210 GSMG  213 (331)
Q Consensus       210 SS~~  213 (331)
                      ++.+
T Consensus       145 ~~~G  148 (198)
T cd01485         145 ATYG  148 (198)
T ss_pred             Eeec
Confidence            6554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.10  E-value=0.0061  Score=53.35  Aligned_cols=96  Identities=18%  Similarity=0.117  Sum_probs=62.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchh--------------------------hhcCCCC--cEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESK--------------------------QKIGGAD--DLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~--------------------------~~l~~~~--~~v  131 (331)
                      ...+|+|.|+ |.+|+.+++.|...  |. ++++++.+.-..                          .++.+.+  +.+
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAA--GVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            4678999998 99999999999999  65 577776542111                          1112223  333


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ...+. ++.+.+.++++|+||.+..                              |...-..+-++|+++++ .+|+.+.
T Consensus       108 ~~~i~-~~~~~~~~~~~DiVi~~~D------------------------------~~~~r~~ln~~~~~~~i-p~v~~~~  155 (245)
T PRK05690        108 NARLD-DDELAALIAGHDLVLDCTD------------------------------NVATRNQLNRACFAAKK-PLVSGAA  155 (245)
T ss_pred             eccCC-HHHHHHHHhcCCEEEecCC------------------------------CHHHHHHHHHHHHHhCC-EEEEeee
Confidence            33333 4456777889999999874                              34444557778888875 5665433

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.09  E-value=0.0031  Score=57.48  Aligned_cols=72  Identities=19%  Similarity=0.223  Sum_probs=50.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh-----cCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI-----QGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~a  155 (331)
                      +.+|||+||+|.+|..+++.+...  |.+|+++++++++.+.+.. +...+ .|..+.+.+.+.+     .++|+|+++.
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~--G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~  215 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNV  215 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECC
Confidence            568999999999999999988888  9999999998776655432 22222 2333322333222     2689999988


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       216 G  216 (325)
T TIGR02825       216 G  216 (325)
T ss_pred             C
Confidence            7

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.07  E-value=0.0066  Score=50.20  Aligned_cols=69  Identities=14%  Similarity=0.059  Sum_probs=46.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC---chhh----------------------hcCCCC--cEEEccC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE---ESKQ----------------------KIGGAD--DLFIGDI  135 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~---~~~~----------------------~l~~~~--~~v~~Dl  135 (331)
                      +|+|.|+ |.+|+++++.|.+.  |. ++++++.+.   +.+.                      ++.+.+  +.+...+
T Consensus         1 ~VlViG~-GglGs~ia~~La~~--Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~   77 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARS--GVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI   77 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHc--CCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec
Confidence            4899996 99999999999999  77 488888764   1111                      111222  2333333


Q ss_pred             CCcccHHHHhcCCCEEEEccc
Q 046297          136 RDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus       136 ~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      . .+.+.+.++++|+||.+..
T Consensus        78 ~-~~~~~~~l~~~DlVi~~~d   97 (174)
T cd01487          78 D-ENNLEGLFGDCDIVVEAFD   97 (174)
T ss_pred             C-hhhHHHHhcCCCEEEECCC
Confidence            3 3456778889999998853

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.07  E-value=0.0085  Score=52.35  Aligned_cols=95  Identities=15%  Similarity=0.141  Sum_probs=73.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      +++|||.|||+ =|+.|++.|.++  |+.|++..-.+... .-...+.+..+-+.|.+.+.+.++  ++++||+..-+. 
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~--g~~v~~Svat~~g~-~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPf-   76 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAA--GVDIVLSLAGRTGG-PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPY-   76 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhC--CCeEEEEEccCCCC-cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCcc-
Confidence            56799999986 499999999999  99988877766443 222357788888888999999996  799999998642 


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEE
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVL  208 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~  208 (331)
                                                 -....+++.++|++.++..+=|
T Consensus        77 ---------------------------A~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         77 ---------------------------AAQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             ---------------------------HHHHHHHHHHHHHHhCCcEEEE
Confidence                                       2334788999999988865544

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.07  E-value=0.0017  Score=59.63  Aligned_cols=75  Identities=17%  Similarity=0.167  Sum_probs=51.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc----CCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ----GIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~----~~d~Vi~~ag  156 (331)
                      .++.|||.||+|.+|++.++.+...  +..+++.+++.++.+-.+..-.-...|+.+++.+++..+    ++|+|++|+|
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~--~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg  234 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHA--GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVG  234 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhc--CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCC
Confidence            3678999999999999999999888  844444555555544333322223457777665554444    5999999998


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       235 ~  235 (347)
T KOG1198|consen  235 G  235 (347)
T ss_pred             C
Confidence            5

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.07  E-value=0.004  Score=57.13  Aligned_cols=72  Identities=22%  Similarity=0.230  Sum_probs=50.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHh-----cCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAI-----QGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~  154 (331)
                      +.+|||+||+|.+|..+++.+...  |.+|+++++++++.+.+..  +...+ .|..+.+++.+.+     .++|+|+++
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~--G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~  228 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLK--GCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDN  228 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence            578999999999999999988888  9999999998877665432  22222 2322222232222     368999998


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      .|
T Consensus       229 ~g  230 (338)
T cd08295         229 VG  230 (338)
T ss_pred             CC
Confidence            87

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.07  E-value=0.0056  Score=56.62  Aligned_cols=97  Identities=12%  Similarity=0.070  Sum_probs=63.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCC--CcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGA--DDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~--~~~v  131 (331)
                      ...+|+|.|+ |.+|+.+++.|...  |. ++++++.+.-...                          ++.+.  ++.+
T Consensus        27 ~~~~VlivG~-GGlGs~~a~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         27 FDAKVAVIGA-GGLGSPALLYLAGA--GVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            4578999997 99999999999999  66 5777776531111                          11222  3333


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ...+. ++...+.++++|+||.+..                              |...-..+-++|.+.++ .||+.+.
T Consensus       104 ~~~i~-~~~~~~~~~~~DvVvd~~d------------------------------~~~~r~~~n~~c~~~~i-p~v~~~~  151 (355)
T PRK05597        104 VRRLT-WSNALDELRDADVILDGSD------------------------------NFDTRHLASWAAARLGI-PHVWASI  151 (355)
T ss_pred             EeecC-HHHHHHHHhCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEEE
Confidence            34443 3446677889999999874                              34434456677888876 5665544


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       152 ~  152 (355)
T PRK05597        152 L  152 (355)
T ss_pred             e
Confidence            3

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.07  E-value=0.006  Score=56.98  Aligned_cols=97  Identities=14%  Similarity=0.120  Sum_probs=63.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC-------------------chhh-------hcCCCCc--EE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE-------------------ESKQ-------KIGGADD--LF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~-------------------~~~~-------~l~~~~~--~v  131 (331)
                      ...+|+|.|+ |.+|+++++.|...  |. ++++++++.                   .+.+       ++.+.++  .+
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~--Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAA--GVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            4678999986 89999999999999  76 688888762                   1111       1122233  22


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ...+ +.+.+.+.++++|+||++..                              |...-..+-++|++.++ .+|+.+.
T Consensus       211 ~~~~-~~~~~~~~~~~~D~Vv~~~d------------------------------~~~~r~~ln~~~~~~~i-p~i~~~~  258 (376)
T PRK08762        211 QERV-TSDNVEALLQDVDVVVDGAD------------------------------NFPTRYLLNDACVKLGK-PLVYGAV  258 (376)
T ss_pred             eccC-ChHHHHHHHhCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            2233 23456677889999999875                              33333456677888886 6666554


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       259 ~  259 (376)
T PRK08762        259 F  259 (376)
T ss_pred             c
Confidence            3

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=97.07  E-value=0.052  Score=51.88  Aligned_cols=89  Identities=19%  Similarity=0.237  Sum_probs=61.7

Q ss_pred             CCeEEEECCC---ChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAG---GRTGQIVYKKLKERSEQY--AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGat---G~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .++|.|+|++   |.+|..+.+.|++.  ||  +|+.+..+.....           .+.-..++.++-+.+|.++.+..
T Consensus         7 p~siavvGaS~~~~~~g~~~~~~l~~~--gf~g~v~~Vnp~~~~i~-----------G~~~~~sl~~lp~~~Dlavi~vp   73 (447)
T TIGR02717         7 PKSVAVIGASRDPGKVGYAIMKNLIEG--GYKGKIYPVNPKAGEIL-----------GVKAYPSVLEIPDPVDLAVIVVP   73 (447)
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHhC--CCCCcEEEECCCCCccC-----------CccccCCHHHCCCCCCEEEEecC
Confidence            4679999998   67899999999998  87  5766655432211           11122334454457898887764


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~  214 (331)
                      .                               ..+..+++.|.+.|++.+|.+|+...
T Consensus        74 ~-------------------------------~~~~~~l~e~~~~gv~~~vi~s~gf~  100 (447)
T TIGR02717        74 A-------------------------------KYVPQVVEECGEKGVKGAVVITAGFK  100 (447)
T ss_pred             H-------------------------------HHHHHHHHHHHhcCCCEEEEECCCcc
Confidence            2                               33577888888999999988877553

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.06  E-value=0.0081  Score=54.25  Aligned_cols=96  Identities=17%  Similarity=0.198  Sum_probs=62.0

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh--------------------------cCCC--CcEEEcc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK--------------------------IGGA--DDLFIGD  134 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~--------------------------l~~~--~~~v~~D  134 (331)
                      +|||.|+ |++|.++++.|...  |. ++++++.+.-....                          +.+.  ++....+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~--Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~   77 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLT--GFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHAN   77 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHh--cCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEecc
Confidence            5899996 99999999999999  65 56676654322111                          1122  3444455


Q ss_pred             CCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          135 IRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       135 l~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      +.+.+...+.++++|+||.+..                              |...-..+-+.|.++++ .||..++.|
T Consensus        78 i~~~~~~~~f~~~~DvVv~a~D------------------------------n~~ar~~in~~c~~~~i-p~I~~gt~G  125 (312)
T cd01489          78 IKDPDFNVEFFKQFDLVFNALD------------------------------NLAARRHVNKMCLAADV-PLIESGTTG  125 (312)
T ss_pred             CCCccchHHHHhcCCEEEECCC------------------------------CHHHHHHHHHHHHHCCC-CEEEEecCc
Confidence            6554334466778888888763                              45555667777888875 566655543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.06  E-value=0.0016  Score=58.52  Aligned_cols=72  Identities=17%  Similarity=0.129  Sum_probs=50.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-----------CcEEE--------ccCCCcccHH
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-----------DDLFI--------GDIRDSNSII  142 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-----------~~~v~--------~Dl~d~~~~~  142 (331)
                      .++|.|+|+ |.+|..++..|+++  |++|++.+++++..+.....           .....        ..+.-..++.
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~--G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~   79 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFH--GFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLA   79 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHH
Confidence            467999986 99999999999999  99999999987654432111           11110        1111134567


Q ss_pred             HHhcCCCEEEEccc
Q 046297          143 PAIQGIDALIILTS  156 (331)
Q Consensus       143 ~~l~~~d~Vi~~ag  156 (331)
                      ++++++|+||.+..
T Consensus        80 ~a~~~aDlVieavp   93 (287)
T PRK08293         80 EAVKDADLVIEAVP   93 (287)
T ss_pred             HHhcCCCEEEEecc
Confidence            78899999999875

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.05  E-value=0.0098  Score=50.20  Aligned_cols=97  Identities=12%  Similarity=0.102  Sum_probs=60.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchh--------------------------hhcCCCC--cEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESK--------------------------QKIGGAD--DLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~--------------------------~~l~~~~--~~v  131 (331)
                      ...+|+|.|+ |.+|.++++.|...  |. ++++++.+.-..                          .++.+.+  +.+
T Consensus        20 ~~s~VlIiG~-gglG~evak~La~~--GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          20 RSARILLIGL-KGLGAEIAKNLVLS--GIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HhCcEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            3578999997 55999999999999  76 477776542111                          1122222  233


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ...+.  +...+.++++|+||.+..                              |......+-+.|++.++ .+|+.++
T Consensus        97 ~~~~~--~~~~~~~~~~dvVi~~~~------------------------------~~~~~~~ln~~c~~~~i-p~i~~~~  143 (197)
T cd01492          97 TDDIS--EKPEEFFSQFDVVVATEL------------------------------SRAELVKINELCRKLGV-KFYATGV  143 (197)
T ss_pred             ecCcc--ccHHHHHhCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            33333  224556788899887753                              34445567788888887 5666555


Q ss_pred             CC
Q 046297          212 MG  213 (331)
Q Consensus       212 ~~  213 (331)
                      .+
T Consensus       144 ~G  145 (197)
T cd01492         144 HG  145 (197)
T ss_pred             cC
Confidence            43

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.05  E-value=0.0077  Score=56.97  Aligned_cols=43  Identities=21%  Similarity=0.190  Sum_probs=37.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG  126 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~  126 (331)
                      .+++|.|+| .|++|..++..|+++  ||+|+++++++++.+.+..
T Consensus         2 ~~~kI~VIG-lG~~G~~~A~~La~~--G~~V~~~D~~~~~v~~l~~   44 (415)
T PRK11064          2 SFETISVIG-LGYIGLPTAAAFASR--QKQVIGVDINQHAVDTINR   44 (415)
T ss_pred             CccEEEEEC-cchhhHHHHHHHHhC--CCEEEEEeCCHHHHHHHHC
Confidence            357899998 599999999999999  9999999999988777644

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.04  E-value=0.0023  Score=56.72  Aligned_cols=110  Identities=18%  Similarity=0.069  Sum_probs=70.2

Q ss_pred             EEEECCCChhHHHHHHHHHhcC--CCCeEEEEecCCchhhhcC----CCCcEE-EccCCCcccHHHHhcCCCEEEEcccC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERS--EQYAARGLVRTEESKQKIG----GADDLF-IGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~--~g~~V~~l~R~~~~~~~l~----~~~~~v-~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      |.|+||+|.+|..++..|+..+  ...+++++++++++++...    .-.... ...+.-.+++.++++++|+||..++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799999999999999999982  2279999999876544321    111111 12232234567788999999999986


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEE
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLV  209 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~  209 (331)
                      ....+.        .-.       .....|+...+.+++.+++..-+ .++.+
T Consensus        81 ~~~~g~--------~r~-------~~~~~n~~i~~~i~~~i~~~~p~a~~i~~  118 (263)
T cd00650          81 GRKPGM--------GRL-------DLLKRNVPIVKEIGDNIEKYSPDAWIIVV  118 (263)
T ss_pred             CCCcCC--------CHH-------HHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            443211        001       11245677778888888877644 34444

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=97.04  E-value=0.0047  Score=54.47  Aligned_cols=41  Identities=27%  Similarity=0.229  Sum_probs=30.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIG  125 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~  125 (331)
                      +.-|+|+|+ |.+|+|++..|++.  |+ ++.+++-++-.+..+.
T Consensus        74 ~syVVVVG~-GgVGSwv~nmL~RS--G~qKi~iVDfdqVSlsSLN  115 (430)
T KOG2018|consen   74 NSYVVVVGA-GGVGSWVANMLLRS--GVQKIRIVDFDQVSLSSLN  115 (430)
T ss_pred             CcEEEEEec-CchhHHHHHHHHHh--cCceEEEechhhccHhhhh
Confidence            456888886 89999999999999  87 4667776654444443

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.04  E-value=0.0014  Score=55.51  Aligned_cols=69  Identities=17%  Similarity=0.075  Sum_probs=49.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-CCCEEEEccc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-GIDALIILTS  156 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-~~d~Vi~~ag  156 (331)
                      +..+++|+|+|. |.+|+++++.|.+.  |++|++.++++++...+.........|.   +   +++. .+|+++.++.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~--G~~Vvv~D~~~~~~~~~~~~~g~~~v~~---~---~l~~~~~Dv~vp~A~   94 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEE--GAKLIVADINEEAVARAAELFGATVVAP---E---EIYSVDADVFAPCAL   94 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHcCCEEEcc---h---hhccccCCEEEeccc
Confidence            345789999997 79999999999999  9999999998776655433221122222   2   2332 7999998875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.02  E-value=0.0032  Score=57.24  Aligned_cols=72  Identities=10%  Similarity=0.012  Sum_probs=51.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC------------CC--cEEEccCCCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG------------AD--DLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~------------~~--~~v~~Dl~d~~~~~~~l~~  147 (331)
                      .++|.|+|+ |-+|..++..|+..  |++|++.+++++..+....            ..  ......+.-..++.+++++
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~a--G~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~   83 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAH--GLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVAD   83 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcC
Confidence            467999986 99999999999999  9999999998765433111            00  0001122223457788899


Q ss_pred             CCEEEEccc
Q 046297          148 IDALIILTS  156 (331)
Q Consensus       148 ~d~Vi~~ag  156 (331)
                      +|.|+-++.
T Consensus        84 aDlViEavp   92 (321)
T PRK07066         84 ADFIQESAP   92 (321)
T ss_pred             CCEEEECCc
Confidence            999999874

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.02  E-value=0.011  Score=50.11  Aligned_cols=71  Identities=15%  Similarity=0.083  Sum_probs=49.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecC---Cchhhh----------------------cCCC--CcEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRT---EESKQK----------------------IGGA--DDLFI  132 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~---~~~~~~----------------------l~~~--~~~v~  132 (331)
                      ...+|+|.|+ |.+|+.+++.|.+.  |. ++++++++   ++.+..                      +.+.  ++.+.
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARA--GIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHc--CCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            4678999997 88999999999999  88 68888887   322211                      1111  23333


Q ss_pred             ccCCCcccHHHHhcCCCEEEEcc
Q 046297          133 GDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus       133 ~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      .+++ ++.+.+.++++|+||.+.
T Consensus        97 ~~i~-~~~~~~~~~~~DlVi~a~  118 (200)
T TIGR02354        97 EKIT-EENIDKFFKDADIVCEAF  118 (200)
T ss_pred             eeCC-HhHHHHHhcCCCEEEECC
Confidence            4443 455777888999999884

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.01  E-value=0.0055  Score=55.70  Aligned_cols=72  Identities=28%  Similarity=0.295  Sum_probs=49.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCC-cccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRD-SNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d-~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+|+|+||+|.+|..+++.+...  |.+|+++++++++.+.+.. ....+ .|..+ .+.+.+. .++|+|++++|.
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~d~v~~~~g~  236 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKAL--GARVIAVTRSPEKLKILKELGADYV-IDGSKFSEDVKKL-GGADVVIELVGS  236 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHcCCcEE-EecHHHHHHHHhc-cCCCEEEECCCh
Confidence            568999999999999999999999  9999999998766555432 11111 12221 1122222 379999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.00  E-value=0.0019  Score=60.04  Aligned_cols=74  Identities=15%  Similarity=0.082  Sum_probs=57.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...+|+|+|+ |.+|...++.|...  |.+|++++|++++.+.+... ...+..+..+.+.+.+.++++|+||++++.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~l--Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGL--GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            3467999987 99999999999999  99999999988776554322 123444566677888889999999998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.99  E-value=0.0089  Score=51.78  Aligned_cols=96  Identities=11%  Similarity=0.106  Sum_probs=60.6

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhc--------------------------CCC--CcEEEcc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKI--------------------------GGA--DDLFIGD  134 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l--------------------------~~~--~~~v~~D  134 (331)
                      +|||.|+ |.+|..+++.|...  |. ++++++.+.=....+                          .+.  ++.+..+
T Consensus         1 kVlvvG~-GGlG~eilk~La~~--Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~   77 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALM--GFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNK   77 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            4899985 99999999999999  65 567777643111111                          111  3344455


Q ss_pred             CCCcccH-HHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          135 IRDSNSI-IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       135 l~d~~~~-~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      +.+.+.. .+.++++|+|+.+..                              |+..-..+-+.|.+.++ .+|..++.+
T Consensus        78 i~~~~~~~~~f~~~~DvVi~a~D------------------------------n~~aR~~ln~~c~~~~i-plI~~g~~G  126 (234)
T cd01484          78 VGPEQDFNDTFFEQFHIIVNALD------------------------------NIIARRYVNGMLIFLIV-PLIESGTEG  126 (234)
T ss_pred             CChhhhchHHHHhCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEcccC
Confidence            5433322 345678888888753                              55555667777888875 566655543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.99  E-value=0.0028  Score=52.00  Aligned_cols=57  Identities=16%  Similarity=0.187  Sum_probs=47.8

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +..+++|+|+|+++.+|..+++.|.++  |.+|+++.|+.                    +++.+.+.++|+||.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~--g~~V~v~~r~~--------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNR--NATVTVCHSKT--------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhC--CCEEEEEECCc--------------------hhHHHHHhhCCEEEEcCCC
Confidence            346789999999667899999999999  99999999863                    3466778889999998875

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.97  E-value=0.006  Score=57.69  Aligned_cols=72  Identities=21%  Similarity=0.295  Sum_probs=52.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC-cEEE-------------ccCCCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFI-------------GDIRDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~-~~v~-------------~Dl~d~~~~~~~l~~~  148 (331)
                      |+|.|+| .|++|..++..|.++  ||+|+++++++++.+.+..+. .+.+             +-+.-..+..++++++
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~--G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~a   77 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADL--GHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDA   77 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhc--CCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhC
Confidence            4688998 599999999999999  999999999988777654321 1100             1122223456677899


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |+||-+...
T Consensus        78 dvvii~vpt   86 (411)
T TIGR03026        78 DVIIICVPT   86 (411)
T ss_pred             CEEEEEeCC
Confidence            999999864

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK07877 hypothetical protein; Provisional

Probab=96.97  E-value=0.0057  Score=61.34  Aligned_cols=97  Identities=12%  Similarity=0.133  Sum_probs=66.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCc---hhh----------------------hcCCC--CcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEE---SKQ----------------------KIGGA--DDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~---~~~----------------------~l~~~--~~~v  131 (331)
                      ...+|+|+|+ | +|++++..|...  |.  ++++++.+.=   +++                      ++.+.  ++.+
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~Lara--GvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAE--GLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHc--cCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            3678999999 7 999999999999  73  6777776431   111                      11122  4455


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ...++ ++.+.+.++++|+|+.+.-                              |+..-..+-++|.++++ .+|+-++
T Consensus       182 ~~~i~-~~n~~~~l~~~DlVvD~~D------------------------------~~~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        182 TDGLT-EDNVDAFLDGLDVVVEECD------------------------------SLDVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             eccCC-HHHHHHHhcCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence            55554 5678888999999999974                              44444556678888886 5666555


Q ss_pred             CC
Q 046297          212 MG  213 (331)
Q Consensus       212 ~~  213 (331)
                      .+
T Consensus       230 ~~  231 (722)
T PRK07877        230 DR  231 (722)
T ss_pred             CC
Confidence            44

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.93  E-value=0.007  Score=54.85  Aligned_cols=110  Identities=16%  Similarity=0.132  Sum_probs=66.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhc----CCCCcEE--EccCCCcccHHHHhcCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKI----GGADDLF--IGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l----~~~~~~v--~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ++||.|+|| |.+|..++..|+..  |. +|++++++++..+..    .......  ...++...++ +.++++|+||.+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~--~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALK--ELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence            478999998 99999999999988  65 999999987654321    1111000  0111112234 457899999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCe-EEEEc
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQ-IVLVG  210 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~-~v~~S  210 (331)
                      +|.....+.        +-       .+....|+...+.+++.+.+..-+. +|.++
T Consensus        78 ~~~p~~~~~--------~r-------~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         78 AGVPRKPGM--------SR-------DDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCCCcCC--------CH-------HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            986322110        00       0111346666777777777765443 55444

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.93  E-value=0.014  Score=50.51  Aligned_cols=99  Identities=11%  Similarity=0.043  Sum_probs=62.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCCCc--EE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGADD--LF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~~~--~v  131 (331)
                      ...+|+|.|. |.+|+++++.|.+.  |. ++++++.+.-...                          ++.+.++  .+
T Consensus        10 ~~~~VlVvG~-GGvGs~va~~Lar~--GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755          10 RNAHVAVVGL-GGVGSWAAEALARS--GVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            3568999996 99999999999999  65 6777775431111                          1112222  23


Q ss_pred             EccCCCcccHHHHhc-CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          132 IGDIRDSNSIIPAIQ-GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~-~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      ...+. ++.+.+.+. ++|+||.+..                              ++.....+.++|+++++ .||...
T Consensus        87 ~~~i~-~~~~~~l~~~~~D~VvdaiD------------------------------~~~~k~~L~~~c~~~~i-p~I~s~  134 (231)
T cd00755          87 EEFLT-PDNSEDLLGGDPDFVVDAID------------------------------SIRAKVALIAYCRKRKI-PVISSM  134 (231)
T ss_pred             eeecC-HhHHHHHhcCCCCEEEEcCC------------------------------CHHHHHHHHHHHHHhCC-CEEEEe
Confidence            32332 344555554 6899988864                              34455678889999886 566555


Q ss_pred             cCCC
Q 046297          211 SMGG  214 (331)
Q Consensus       211 S~~~  214 (331)
                      ++++
T Consensus       135 g~g~  138 (231)
T cd00755         135 GAGG  138 (231)
T ss_pred             CCcC
Confidence            5543

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.91  E-value=0.0098  Score=55.26  Aligned_cols=95  Identities=17%  Similarity=0.192  Sum_probs=63.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCC--CcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGA--DDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~--~~~v  131 (331)
                      ...+|+|.|+ |.+|.++++.|...  |. ++++++.+.-...                          ++.+.  ++.+
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~--Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASA--GVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            4568999996 99999999999999  75 7888887521111                          11222  3333


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      ...++ ++.+.+.++++|+||.+..                              |+..-..+-++|.+.++ .+|+.+
T Consensus       117 ~~~i~-~~~~~~~~~~~DlVid~~D------------------------------n~~~r~~in~~~~~~~i-P~v~~~  163 (370)
T PRK05600        117 RERLT-AENAVELLNGVDLVLDGSD------------------------------SFATKFLVADAAEITGT-PLVWGT  163 (370)
T ss_pred             eeecC-HHHHHHHHhCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEE
Confidence            33443 4457778899999999875                              45545556677888876 444443

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.90  E-value=0.032  Score=50.54  Aligned_cols=108  Identities=11%  Similarity=0.046  Sum_probs=70.2

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCC--------CCcEEEccCCCcccHHHHhcCCCEE
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGG--------ADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~--------~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      ||.|.|+ |.+|..++..|+.++-.-++++++.++++.+.    +..        .+.+..+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889998 99999999999988323479999987654322    111        12222222       3567899999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      |..||.....+.       .+.      -.+....|....+.+.+.+++++-+-++.+-|-
T Consensus        73 vitaG~~~kpg~-------tr~------R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          73 VITAGPSIDPGN-------TDD------RLDLAQTNAKIIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             EECCCCCCCCCC-------Cch------HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            999997433211       000      012236688888999999998886655555543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.89  E-value=0.0028  Score=61.73  Aligned_cols=72  Identities=21%  Similarity=0.078  Sum_probs=48.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh-cCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI-QGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l-~~~d~Vi~~ag~  157 (331)
                      ..+++++|+|+ |++|+.++..|++.  |++|+++.|+.++.+.+.........++   +++.+.. ...|+|+|+...
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~--G~~V~i~nR~~e~a~~la~~l~~~~~~~---~~~~~~~~~~~diiINtT~v  449 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEK--GARVVIANRTYERAKELADAVGGQALTL---ADLENFHPEEGMILANTTSV  449 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceeeH---hHhhhhccccCeEEEecccC
Confidence            44678999998 89999999999999  9999999998777665533221111122   2222222 356788877654

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.87  E-value=0.011  Score=55.21  Aligned_cols=71  Identities=23%  Similarity=0.292  Sum_probs=55.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      +.+|+|.|. |.+|+.++++|.++  |+++++++.+.. .+...++..++.+|.+|++.++++ +++++.|+-+..
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~--g~~vvVId~d~~-~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~  311 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQR--GQAVTVIVPLGL-EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALRD  311 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHC--CCCEEEEECchh-hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCC
Confidence            456888885 89999999999998  899988886532 233445688999999999988765 468899987654

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.86  E-value=0.0047  Score=56.88  Aligned_cols=35  Identities=29%  Similarity=0.327  Sum_probs=28.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      ++|.|+||+|++|++|++.|.+++ ..+++.+.++.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~-~~~l~~v~~~~   35 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHP-YFELAKVVASP   35 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CceEEEEEECh
Confidence            479999999999999999888872 56888875543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.85  E-value=0.0046  Score=56.33  Aligned_cols=111  Identities=14%  Similarity=0.090  Sum_probs=68.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhh--c--CCCCcEE--EccCCCcccHHHHhcCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQK--I--GGADDLF--IGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~--l--~~~~~~v--~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      .+||.|+|| |.+|+.++..|+..  | .++++++++++..+.  +  ..-....  ...+....+++ .++++|+||.+
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~~--~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit   80 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQK--NLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT   80 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHC--CCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence            568999997 99999999998888  6 689999998754322  1  0000000  01111123455 67999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCe-EEEEcc
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQ-IVLVGS  211 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~-~v~~SS  211 (331)
                      +|.......        +-       .+....|..-.+.+++.+.+..-+- ++.+|-
T Consensus        81 ag~~~~~g~--------~r-------~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         81 AGVQRKEEM--------TR-------EDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCCCCCC--------CH-------HHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            986332110        00       1122456666777888888776554 555543

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.85  E-value=0.011  Score=54.65  Aligned_cols=94  Identities=17%  Similarity=0.217  Sum_probs=58.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCe---EEEEecCCch--hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYA---ARGLVRTEES--KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~---V~~l~R~~~~--~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ++|.|.||||++|+.+.+.|++.+ ...   ++.+......  ...+.+. .....++.+++    .++++|+|+.+++.
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~-~f~~~~l~~~ss~~sg~~~~~f~g~-~~~v~~~~~~~----~~~~~Divf~a~~~   75 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEEN-DFDLIEPVFFSTSQAGGAAPSFGGK-EGTLQDAFDID----ALKKLDIIITCQGG   75 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCC-CCCcCcEEEecchhhCCcccccCCC-cceEEecCChh----HhcCCCEEEECCCH
Confidence            689999999999999999777763 565   6665543211  1112221 22223333333    24689999999873


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMG  213 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~  213 (331)
                                                     .....+...+.++|++ .+|=.||..
T Consensus        76 -------------------------------~~s~~~~~~~~~aG~~~~VID~Ss~f  101 (369)
T PRK06598         76 -------------------------------DYTNEVYPKLRAAGWQGYWIDAASTL  101 (369)
T ss_pred             -------------------------------HHHHHHHHHHHhCCCCeEEEECChHH
Confidence                                           1256777777778875 355555554

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.83  E-value=0.01  Score=52.44  Aligned_cols=74  Identities=22%  Similarity=0.223  Sum_probs=57.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcE-EEccCCCcccHHHHhc-----CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDL-FIGDIRDSNSIIPAIQ-----GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~-v~~Dl~d~~~~~~~l~-----~~d~Vi~~  154 (331)
                      .+.+|+|.||+|-+|+-+.+...-+  |++|+++.-++++.+.+...+-+ ...|...+ ++.+.|+     ++|+.|.|
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlk--G~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeN  226 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLK--GCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFEN  226 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhh--CCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEc
Confidence            3678999999999999999888888  99999999999998877653322 23466555 3555553     79999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      .|.
T Consensus       227 VGg  229 (340)
T COG2130         227 VGG  229 (340)
T ss_pred             CCc
Confidence            984

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.83  E-value=0.014  Score=53.03  Aligned_cols=52  Identities=17%  Similarity=0.195  Sum_probs=40.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      .|+|.|.|+ |.+|..+++.|.++  ||+|++.+|++.                   +++.++++++|+|+.+.
T Consensus         4 ~m~I~iiG~-G~~G~~lA~~l~~~--G~~V~~~~r~~~-------------------~~~~~~~~~advvi~~v   55 (308)
T PRK14619          4 PKTIAILGA-GAWGSTLAGLASAN--GHRVRVWSRRSG-------------------LSLAAVLADADVIVSAV   55 (308)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHC--CCEEEEEeCCCC-------------------CCHHHHHhcCCEEEEEC
Confidence            578999984 99999999999999  999999999753                   22445555666666655

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.82  E-value=0.0022  Score=61.28  Aligned_cols=70  Identities=16%  Similarity=0.097  Sum_probs=48.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh----hhcCC-CCcEEEccCCCcccHHHHhc-CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK----QKIGG-ADDLFIGDIRDSNSIIPAIQ-GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~----~~l~~-~~~~v~~Dl~d~~~~~~~l~-~~d~Vi~~  154 (331)
                      .+++|+|+|++| +|...++.|++.  |++|++.+++....    +.+.. ++.+..++  ++..   .+. ++|.||..
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~--G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~---~~~~~~d~vV~s   75 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKL--GANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLE---LLDEDFDLMVKN   75 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHC--CCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHH---HhcCcCCEEEEC
Confidence            357899999976 999999999999  99999998765321    22322 34444332  1222   234 48999999


Q ss_pred             ccCC
Q 046297          155 TSAV  158 (331)
Q Consensus       155 ag~~  158 (331)
                      .|..
T Consensus        76 ~gi~   79 (447)
T PRK02472         76 PGIP   79 (447)
T ss_pred             CCCC
Confidence            9863

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.82  E-value=0.0097  Score=54.09  Aligned_cols=72  Identities=21%  Similarity=0.291  Sum_probs=51.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH---h--cCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA---I--QGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~---l--~~~d~Vi~~a  155 (331)
                      +.+|+|+|+++.+|..+++.+...  |++|+++++++++.+.+.. ... ...|..+.+....+   .  .++|.+++++
T Consensus       167 ~~~vlI~g~~~~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~  243 (342)
T cd08266         167 GETVLVHGAGSGVGSAAIQIAKLF--GATVIATAGSEDKLERAKELGAD-YVIDYRKEDFVREVRELTGKRGVDVVVEHV  243 (342)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCC-eEEecCChHHHHHHHHHhCCCCCcEEEECC
Confidence            568999999999999999999999  9999999998766554422 111 12344444433332   2  2689999998


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       244 g  244 (342)
T cd08266         244 G  244 (342)
T ss_pred             c
Confidence            7

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.82  E-value=0.011  Score=55.52  Aligned_cols=97  Identities=19%  Similarity=0.093  Sum_probs=61.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCCC--cEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGAD--DLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~~--~~v  131 (331)
                      ...+|+|+|+ |.+|+.+++.|...  |. ++++++.+.-...                          ++.+.+  +.+
T Consensus        41 ~~~~VlviG~-GGlGs~va~~La~~--Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         41 KNARVLVIGA-GGLGSPTLLYLAAA--GVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHc--CCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            3568999996 99999999999999  65 5666665421111                          112223  333


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ...+. .+...+.++++|+||.+..                              |...-..+-++|.+.++ .||+.+.
T Consensus       118 ~~~i~-~~~~~~~~~~~D~Vvd~~d------------------------------~~~~r~~ln~~~~~~~~-p~v~~~~  165 (392)
T PRK07878        118 EFRLD-PSNAVELFSQYDLILDGTD------------------------------NFATRYLVNDAAVLAGK-PYVWGSI  165 (392)
T ss_pred             eccCC-hhHHHHHHhcCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            34443 3346677889999998864                              34444456677888875 4665444


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       166 ~  166 (392)
T PRK07878        166 Y  166 (392)
T ss_pred             c
Confidence            3

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.82  E-value=0.008  Score=54.51  Aligned_cols=108  Identities=17%  Similarity=0.067  Sum_probs=66.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhhh----cCCCCcEE-EccCCCcccHHHHhcCCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQK----IGGADDLF-IGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~~----l~~~~~~v-~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      |+|.|.|+ |.+|..++..|+.+  |  .+|+++++++++...    +.....+. ...+. ..+. +.++++|+||.++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~--g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~~d~-~~l~~aDiViita   75 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLR--GLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-AGDY-ADCKGADVVVITA   75 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-eCCH-HHhCCCCEEEEcc
Confidence            47999998 99999999999999  6  689999998765432    22111000 00111 1123 4578999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      +.......        +   .    .+....|....+.+++.+++.+-+-++.+-
T Consensus        76 ~~~~~~~~--------~---r----~dl~~~n~~i~~~~~~~l~~~~~~giiiv~  115 (308)
T cd05292          76 GANQKPGE--------T---R----LDLLKRNVAIFKEIIPQILKYAPDAILLVV  115 (308)
T ss_pred             CCCCCCCC--------C---H----HHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            86332110        0   0    111245777777888888777654444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.80  E-value=0.012  Score=51.52  Aligned_cols=73  Identities=22%  Similarity=0.167  Sum_probs=49.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHH----hcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA----IQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~----l~~~d~Vi~~ag  156 (331)
                      .+.+|+|+|+++ +|..+++.+...  |.+|+++++++++.+.+...-.....|..+.+....+    -.++|+++++++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~  210 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAA--GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVG  210 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHc--CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence            356899999999 999999999888  9999999998766554422111112244333333222    146899999987

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.80  E-value=0.0087  Score=53.67  Aligned_cols=39  Identities=23%  Similarity=0.138  Sum_probs=34.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK  123 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~  123 (331)
                      .++|.|+|+ |.+|..++..|+..  |++|++.+++++..+.
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~--G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARA--GVDVLVFETTEELATA   43 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhC--CCEEEEEECCHHHHHH
Confidence            357999997 99999999999999  9999999999877554

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.79  E-value=0.013  Score=52.97  Aligned_cols=83  Identities=14%  Similarity=0.239  Sum_probs=56.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      +.+|.|.||||++|..|++.|.+++ ..++..+..+..+             |+.+   ..+.++++|+||-+...    
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp-~~~l~~~~s~~~~-------------~~~~---~~~~~~~~DvvFlalp~----   60 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRS-DIELLSIPEAKRK-------------DAAA---RRELLNAADVAILCLPD----   60 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCC-CeEEEEEecCCCC-------------cccC---chhhhcCCCEEEECCCH----
Confidence            5689999999999999999888873 5677777655332             1111   22455789999988752    


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                - ....++..+.+.|+ ++|=.|+..
T Consensus        61 --------------------------~-~s~~~~~~~~~~g~-~VIDlSadf   84 (313)
T PRK11863         61 --------------------------D-AAREAVALIDNPAT-RVIDASTAH   84 (313)
T ss_pred             --------------------------H-HHHHHHHHHHhCCC-EEEECChhh
Confidence                                      1 24556666666666 677677664

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.78  E-value=0.02  Score=48.61  Aligned_cols=69  Identities=17%  Similarity=0.149  Sum_probs=52.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhhc--CCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQKI--GGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~l--~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+++|||+|| |.+|..-++.|++.  |.+|++++.... ....+  ..++.++..++..     ..+++++.||-+.+
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~--ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-----~dl~~~~lVi~at~   78 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKA--GAQLRVIAEELESELTLLAEQGGITWLARCFDA-----DILEGAFLVIAATD   78 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHC--CCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-----HHhCCcEEEEECCC
Confidence            34678999997 99999999999999  999999987654 23333  2357888888752     23678888887655

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.78  E-value=0.018  Score=46.77  Aligned_cols=69  Identities=10%  Similarity=0.070  Sum_probs=45.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ...+++|+|.|| |-+|...++.|++.  |++|++++.... ....+ ..+.+....+...     -++++|.||-+..
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~--ga~V~VIsp~~~~~l~~l-~~i~~~~~~~~~~-----dl~~a~lViaaT~   79 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDT--GAFVTVVSPEICKEMKEL-PYITWKQKTFSND-----DIKDAHLIYAATN   79 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEcCccCHHHHhc-cCcEEEecccChh-----cCCCceEEEECCC
Confidence            345789999997 99999999999999  999998853321 12222 1234433333222     2567888887654

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.77  E-value=0.01  Score=53.92  Aligned_cols=71  Identities=23%  Similarity=0.192  Sum_probs=53.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+|+|+|+. .+|..-++.+...  |.+|++++|++++.+...+- .+.+ .|.+|++.+.++-+.+|+++.+++
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~--ga~Via~~~~~~K~e~a~~lGAd~~-i~~~~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAM--GAEVIAITRSEEKLELAKKLGADHV-INSSDSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHc--CCeEEEEeCChHHHHHHHHhCCcEE-EEcCCchhhHHhHhhCcEEEECCC
Confidence            6789999985 9999999999999  99999999999887554332 2222 233356655555445999999987

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.77  E-value=0.0027  Score=60.38  Aligned_cols=67  Identities=19%  Similarity=0.234  Sum_probs=49.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |+|+|+||.|.+|..+++.|.+.  |++|++.+|+++....+.......   .  ..+..++++++|+||.+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~--G~~V~v~~r~~~~~~~~a~~~gv~---~--~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEK--GFEVIVTGRDPKKGKEVAKELGVE---Y--ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHcCCe---e--ccCHHHHhccCCEEEEecC
Confidence            47999999999999999999999  999999999876643322111111   1  2234566788999998875

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.76  E-value=0.012  Score=52.36  Aligned_cols=75  Identities=13%  Similarity=0.051  Sum_probs=49.7

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEE-EEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAAR-GLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~-~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ++|.+++|.|.|. |.||+.+++.|.+..+++++. +.+|++++.+.+......    ..-.+++.++++++|+|+-++.
T Consensus         2 ~~m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~----~~~~~~~eell~~~D~Vvi~tp   76 (271)
T PRK13302          2 SSRPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRR----PPPVVPLDQLATHADIVVEAAP   76 (271)
T ss_pred             CCCCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCC----CcccCCHHHHhcCCCEEEECCC
Confidence            3466789999995 999999999998732378887 456666655443222110    0112345566778999999986


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus        77 ~   77 (271)
T PRK13302         77 A   77 (271)
T ss_pred             c
Confidence            3

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.76  E-value=0.0026  Score=57.16  Aligned_cols=71  Identities=15%  Similarity=0.126  Sum_probs=51.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC--------Cc---EEE-------ccCCCcccHHHH
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA--------DD---LFI-------GDIRDSNSIIPA  144 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~--------~~---~v~-------~Dl~d~~~~~~~  144 (331)
                      ++|.|+|+ |.+|..++..|+++  |++|++.+++++..+.+...        ++   +..       ..+.-.+++.++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~   78 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVS--GFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA   78 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence            57999997 99999999999999  99999999998776553211        00   000       011113456678


Q ss_pred             hcCCCEEEEccc
Q 046297          145 IQGIDALIILTS  156 (331)
Q Consensus       145 l~~~d~Vi~~ag  156 (331)
                      ++++|+||-+..
T Consensus        79 ~~~aD~Vi~avp   90 (288)
T PRK09260         79 VADADLVIEAVP   90 (288)
T ss_pred             hcCCCEEEEecc
Confidence            899999998875

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.75  E-value=0.01  Score=54.85  Aligned_cols=72  Identities=19%  Similarity=0.185  Sum_probs=50.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCcccHHHHh-----cCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNSIIPAI-----QGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~  154 (331)
                      +.+|||.||+|.+|..+++.+...  |.+|+++++++++.+.+.  -+...+ .|..+.+++.+.+     .++|+++.+
T Consensus       159 g~~VlV~GaaG~vG~~aiqlAk~~--G~~Vi~~~~~~~k~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvD~v~d~  235 (348)
T PLN03154        159 GDSVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKLGFDEA-FNYKEEPDLDAALKRYFPEGIDIYFDN  235 (348)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHhcCCCEE-EECCCcccHHHHHHHHCCCCcEEEEEC
Confidence            568999999999999999988888  999999988877765442  123222 2333222233222     268999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      .|
T Consensus       236 vG  237 (348)
T PLN03154        236 VG  237 (348)
T ss_pred             CC
Confidence            87

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.75  E-value=0.0092  Score=53.51  Aligned_cols=73  Identities=16%  Similarity=0.157  Sum_probs=48.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCc---hhhhcCCCC------cEEEccCCCcccHHHHhcCCCE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEE---SKQKIGGAD------DLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~---~~~~l~~~~------~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      ..++++|.|+ |+.+++++..|...  |. +|+++.|+++   +.+.+...+      .....++.+.+.+.+.+.++|+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~--g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIE--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCE
Confidence            4678999997 77799999999998  75 7999999854   444432211      1112233222234556678999


Q ss_pred             EEEccc
Q 046297          151 LIILTS  156 (331)
Q Consensus       151 Vi~~ag  156 (331)
                      |||+..
T Consensus       200 vINaTp  205 (288)
T PRK12749        200 LTNGTK  205 (288)
T ss_pred             EEECCC
Confidence            999764

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.75  E-value=0.0038  Score=55.95  Aligned_cols=68  Identities=22%  Similarity=0.197  Sum_probs=51.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .+++|+|+|. |.+|+.+++.|...  |++|++..|++++...... ....+     +.+++.+.++++|+||++..
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~--G~~V~v~~R~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSAL--GARVFVGARSSADLARITEMGLIPF-----PLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeee-----cHHHHHHHhccCCEEEECCC
Confidence            4689999997 88999999999999  9999999998765443321 12211     23456778889999999874

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.74  E-value=0.0019  Score=57.38  Aligned_cols=69  Identities=20%  Similarity=0.212  Sum_probs=49.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC----cEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD----DLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~----~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..++++|+|+ |.+|+.++..|++.  |++|+++.|++++.+.+...+    .....++.+     ..+.++|+||++.+
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~--g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~-----~~~~~~DivInatp  187 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKA--DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE-----LPLHRVDLIINATS  187 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh-----hcccCccEEEECCC
Confidence            3578999998 89999999999999  999999999987665543221    111111111     12357999999997


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       188 ~  188 (270)
T TIGR00507       188 A  188 (270)
T ss_pred             C
Confidence            5

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.73  E-value=0.018  Score=44.14  Aligned_cols=85  Identities=22%  Similarity=0.227  Sum_probs=53.3

Q ss_pred             CeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           83 STVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        83 ~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      ++|.|+|++   +..|..+.+.|.+.  ||+|+.+.-+.......           .-..++.+.-..+|.++.+..   
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~--G~~v~~Vnp~~~~i~G~-----------~~y~sl~e~p~~iDlavv~~~---   64 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAA--GYEVYPVNPKGGEILGI-----------KCYPSLAEIPEPIDLAVVCVP---   64 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHT--T-EEEEESTTCSEETTE-----------E-BSSGGGCSST-SEEEE-S----
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhC--CCEEEEECCCceEECcE-----------EeeccccCCCCCCCEEEEEcC---
Confidence            468999988   67899999999998  99999886654332211           011223331256888887764   


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                                                  -..+..+++.|.+.|++.+++.++
T Consensus        65 ----------------------------~~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   65 ----------------------------PDKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             ----------------------------HHHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             ----------------------------HHHHHHHHHHHHHcCCCEEEEEcc
Confidence                                        233677888888889999999887

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.73  E-value=0.011  Score=53.85  Aligned_cols=72  Identities=21%  Similarity=0.227  Sum_probs=50.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCccc---HHHHh-cCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNS---IIPAI-QGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~---~~~~l-~~~d~Vi~~ag  156 (331)
                      +.+|||.||+|.+|..+++.+...  |.+|+++++++++.+.+.+ ++..+ .|..+++.   +.+.. .++|+|+++.|
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~--G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIK--GCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            568999999999999999998888  9999999998877655433 22222 24433332   22222 25899999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.72  E-value=0.0055  Score=55.57  Aligned_cols=112  Identities=12%  Similarity=0.048  Sum_probs=68.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEE-ccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFI-GDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~-~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .+||.|+|+ |.+|..++..|+..+...++++++.+++....    +..-..+.. ..+....++. .++++|+||.++|
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~~adivvitaG   80 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTANSKVVIVTAG   80 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhCCCCEEEECCC
Confidence            468999996 99999999999988434579999987754332    111010000 0111112233 4789999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      .....+.        +       -.+....|..-.+.+.+.+++++-+ .++.+|
T Consensus        81 ~~~k~g~--------~-------R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          81 ARQNEGE--------S-------RLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             CCCCCCC--------C-------HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            7443110        0       1112356777788888888888655 344444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.71  E-value=0.0024  Score=58.04  Aligned_cols=72  Identities=22%  Similarity=0.248  Sum_probs=53.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..++|+|.|+ |.+|..+++.|...+ +.+|++++|++++...+......   +..+.+++.+.+.++|+||.+.+.
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g-~~~V~v~~r~~~ra~~la~~~g~---~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKG-VAEITIANRTYERAEELAKELGG---NAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHcCC---eEEeHHHHHHHHhcCCEEEECCCC
Confidence            4788999997 999999999999862 47899999998776554332211   222234577778899999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.71  E-value=0.02  Score=49.00  Aligned_cols=97  Identities=15%  Similarity=0.171  Sum_probs=63.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCch-------hh-------------------hcCCCCcEEEc-
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEES-------KQ-------------------KIGGADDLFIG-  133 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~-------~~-------------------~l~~~~~~v~~-  133 (331)
                      ..+|+|.|. |++|++.++.|.+.  |. ++++++-+.=.       ..                   ...+..++... 
T Consensus        30 ~~~V~VvGi-GGVGSw~veALaRs--Gig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~  106 (263)
T COG1179          30 QAHVCVVGI-GGVGSWAVEALARS--GIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN  106 (263)
T ss_pred             hCcEEEEec-CchhHHHHHHHHHc--CCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence            457999996 99999999999999  76 45666543211       11                   11122333322 


Q ss_pred             cCCCcccHHHHhc-CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          134 DIRDSNSIIPAIQ-GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       134 Dl~d~~~~~~~l~-~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      |+-.++.+.+.+. +.|+||.+.-                              ++..-..++..|+++++ .||  ||+
T Consensus       107 ~f~t~en~~~~~~~~~DyvIDaiD------------------------------~v~~Kv~Li~~c~~~ki-~vI--ss~  153 (263)
T COG1179         107 DFITEENLEDLLSKGFDYVIDAID------------------------------SVRAKVALIAYCRRNKI-PVI--SSM  153 (263)
T ss_pred             hhhCHhHHHHHhcCCCCEEEEchh------------------------------hhHHHHHHHHHHHHcCC-CEE--eec
Confidence            3446677777775 5899998864                              45556789999999987 554  565


Q ss_pred             CC
Q 046297          213 GG  214 (331)
Q Consensus       213 ~~  214 (331)
                      ++
T Consensus       154 Ga  155 (263)
T COG1179         154 GA  155 (263)
T ss_pred             cc
Confidence            54

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.70  E-value=0.014  Score=52.47  Aligned_cols=82  Identities=13%  Similarity=0.231  Sum_probs=56.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMK  162 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~  162 (331)
                      .+|.|.||+|+.|..|++.|... |..++..+.-...             .+   +.+..++++++|+||.++..     
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~H-P~~el~~l~s~~~-------------~~---~~~~~~~~~~~D~vFlalp~-----   59 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGR-DDIELLSIAPDRR-------------KD---AAERAKLLNAADVAILCLPD-----   59 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCC-CCeEEEEEecccc-------------cC---cCCHhHhhcCCCEEEECCCH-----
Confidence            47999999999999999999998 3778777754422             11   12244566789999988752     


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                .....++..+.+.|+ ++|=.|+..
T Consensus        60 --------------------------~~s~~~~~~~~~~g~-~VIDlSadf   83 (310)
T TIGR01851        60 --------------------------DAAREAVSLVDNPNT-CIIDASTAY   83 (310)
T ss_pred             --------------------------HHHHHHHHHHHhCCC-EEEECChHH
Confidence                                      124456666666665 577677664

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.70  E-value=0.0041  Score=58.77  Aligned_cols=113  Identities=10%  Similarity=-0.003  Sum_probs=67.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhc---CC--CCeEEEEecC--Cchhhh----cCCCC-cEEE-ccCCCcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKER---SE--QYAARGLVRT--EESKQK----IGGAD-DLFI-GDIRDSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~---~~--g~~V~~l~R~--~~~~~~----l~~~~-~~v~-~Dl~d~~~~~~~l~~~  148 (331)
                      .-+|+||||+|.||.+|+-.+..-   ++  -..+++++..  .+.++.    +.+-. .+.. ..++  ..-.++++++
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~~ea~~da  200 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDLDVAFKDA  200 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECCHHHhCCC
Confidence            457999999999999999999873   11  2235566663  332221    11100 0000 0111  1224678999


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC--CeEEEEcc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA--KQIVLVGS  211 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--k~~v~~SS  211 (331)
                      |+||..+|.....+.               +-.+..+.|....+.+.++..+++-  .+++.+.|
T Consensus       201 DvvIitag~prk~G~---------------~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         201 HVIVLLDDFLIKEGE---------------DLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CEEEECCCCCCCcCC---------------CHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            999999997433211               1112236677778888888888765  56666665

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.69  E-value=0.0056  Score=54.44  Aligned_cols=113  Identities=21%  Similarity=0.160  Sum_probs=66.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCCCCc----EE-EccCCCcccHHHHhcCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGGADD----LF-IGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~~~~----~v-~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ..++++|.|| |+.+++++..|++.  | .+++++.|+.++.+++.+...    .+ ..++.+.+...    ..|+|||+
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~--g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINa  197 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEA--GAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINA  197 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEEC
Confidence            3578999996 99999999999999  8 579999999988777643211    11 22222222211    68999998


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH-HHHHHHHHHHcCCC
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG-QKNQIDAAKAAGAK  204 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~-~~~ll~aa~~~~vk  204 (331)
                      ....-....  .+ +.-+ ...+....-..++...- --.+++.|++.|.+
T Consensus       198 Tp~Gm~~~~--~~-~~~~-~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         198 TPVGMAGPE--GD-SPVP-AELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             CCCCCCCCC--CC-CCCc-HHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            864222110  00 0000 11111122222333331 34689999999986

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.68  E-value=0.0079  Score=58.26  Aligned_cols=71  Identities=18%  Similarity=0.139  Sum_probs=50.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-------------CcE-EEccCCCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-------------DDL-FIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-------------~~~-v~~Dl~d~~~~~~~l~~~  148 (331)
                      ++|.|+| +|.+|..++..|+++  |++|++.++++++.+.+...             ... ..+.+.-.+++.++++++
T Consensus         5 ~kIavIG-~G~MG~~iA~~la~~--G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~a   81 (495)
T PRK07531          5 MKAACIG-GGVIGGGWAARFLLA--GIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGA   81 (495)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCC
Confidence            5799997 599999999999999  99999999998765442110             000 001122234567788999


Q ss_pred             CEEEEccc
Q 046297          149 DALIILTS  156 (331)
Q Consensus       149 d~Vi~~ag  156 (331)
                      |+|+-+..
T Consensus        82 D~Vieavp   89 (495)
T PRK07531         82 DWIQESVP   89 (495)
T ss_pred             CEEEEcCc
Confidence            99998864

>PLN00203 glutamyl-tRNA reductase

Probab=96.68  E-value=0.0059  Score=59.10  Aligned_cols=72  Identities=22%  Similarity=0.342  Sum_probs=54.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCC---CcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGA---DDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~---~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ...++|+|+|+ |.+|..+++.|+..  |. +|+++.|+.++...+...   ..+..   ...+++.+++.++|+||.+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~--G~~~V~V~nRs~era~~La~~~~g~~i~~---~~~~dl~~al~~aDVVIsAT  337 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSK--GCTKMVVVNRSEERVAALREEFPDVEIIY---KPLDEMLACAAEADVVFTST  337 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHhCCCceEe---ecHhhHHHHHhcCCEEEEcc
Confidence            34688999998 99999999999998  86 699999998877665432   22222   22345667888999999987


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      +.
T Consensus       338 ~s  339 (519)
T PLN00203        338 SS  339 (519)
T ss_pred             CC
Confidence            64

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.67  E-value=0.0039  Score=56.91  Aligned_cols=72  Identities=17%  Similarity=0.239  Sum_probs=50.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC---CcEE-----EccCCCcccHHHHhcCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA---DDLF-----IGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~---~~~v-----~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      ||+|.|.|+ |.+|..++..|++.  |++|++++|+++..+.+...   ....     ...+.-..+..++++++|+||-
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~   77 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARN--GHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILV   77 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEE
Confidence            368999995 99999999999999  99999999987665554321   0000     0011122345567788999998


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      +..
T Consensus        78 ~v~   80 (325)
T PRK00094         78 AVP   80 (325)
T ss_pred             eCC
Confidence            874

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.66  E-value=0.014  Score=54.41  Aligned_cols=55  Identities=18%  Similarity=0.273  Sum_probs=44.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..++|.|+||.|.+|..+++.|.++  |+.|++.+|++.                   +...++++++|+||-+..
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~--G~~V~~~d~~~~-------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLS--GYQVRILEQDDW-------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHC--CCeEEEeCCCcc-------------------hhHHHHHhcCCEEEEeCc
Confidence            3578999999999999999999999  999999998531                   123456677888887774

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.65  E-value=0.0066  Score=54.18  Aligned_cols=57  Identities=11%  Similarity=0.086  Sum_probs=47.0

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...+++|+|.|++|.+|+.++..|+++  |.+|+++.|..                    ..+.+.++++|+||++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~--gatVtv~~~~t--------------------~~L~~~~~~aDIvI~AtG~  212 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNA--NATVTICHSRT--------------------QNLPELVKQADIIVGAVGK  212 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhC--CCEEEEEeCCc--------------------hhHHHHhccCCEEEEccCC
Confidence            345789999999999999999999999  89999988732                    2355666889999999873

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.63  E-value=0.004  Score=56.10  Aligned_cols=68  Identities=24%  Similarity=0.237  Sum_probs=51.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..++|+|+|. |.+|+.+++.|...  |.+|++++|++++...... ...++     +.+++.+.++++|+||+++.
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~--Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKAL--GANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEECCC
Confidence            4689999996 88999999999999  9999999999765443322 22222     23456778889999999864

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.63  E-value=0.27  Score=43.98  Aligned_cols=90  Identities=19%  Similarity=0.105  Sum_probs=61.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCCCcEEEccCCCcccHHHHhcC--CCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGADDLFIGDIRDSNSIIPAIQG--IDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~ag~~  158 (331)
                      +.+|+|.|-||.+|+.+.+.|+.-  |..++ ..-++.+ .++    +    ..+.-..++.++-+.  +|.++.+... 
T Consensus         6 ~~~~~~~g~~~~~~~~~~~~~~~~--g~~~v-~~V~p~~~~~~----v----~G~~~y~sv~dlp~~~~~Dlavi~vpa-   73 (286)
T TIGR01019         6 DTKVIVQGITGSQGSFHTEQMLAY--GTNIV-GGVTPGKGGTT----V----LGLPVFDSVKEAVEETGANASVIFVPA-   73 (286)
T ss_pred             CCcEEEecCCcHHHHHHHHHHHhC--CCCEE-EEECCCCCcce----e----cCeeccCCHHHHhhccCCCEEEEecCH-
Confidence            568999999999999999999888  77744 4555442 111    1    122223445555554  7999888752 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                    ..+..+++.|.+.|+|.+|.+|+-.
T Consensus        74 ------------------------------~~v~~~l~e~~~~Gvk~avIis~Gf   98 (286)
T TIGR01019        74 ------------------------------PFAADAIFEAIDAGIELIVCITEGI   98 (286)
T ss_pred             ------------------------------HHHHHHHHHHHHCCCCEEEEECCCC
Confidence                                          2256777888889999888877653

ATP citrate lyases appear to form an outgroup.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.63  E-value=0.027  Score=48.96  Aligned_cols=37  Identities=24%  Similarity=0.350  Sum_probs=30.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~  119 (331)
                      +++|.|.|++|..|+.+++.+.+.+ ++++.+ +.|.+.
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~-~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAP-DLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCC-CceEEEEEecCCc
Confidence            5789999999999999999999984 777664 666543

>PLN02602 lactate dehydrogenase

Probab=96.62  E-value=0.0072  Score=55.61  Aligned_cols=111  Identities=14%  Similarity=0.075  Sum_probs=68.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEE-ccCCCcccHHHHhcCCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFI-GDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~-~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +||.|+|+ |.+|+.++-.|+..+...++++++.+++....    +..-..+.. ..+....+.. .++++|+||..||.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~-~~~daDiVVitAG~  115 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYA-VTAGSDLCIVTAGA  115 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHH-HhCCCCEEEECCCC
Confidence            68999996 99999999999988434479999998755432    111100000 1221111233 47899999999997


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      ....+.               +-.+....|..-.+.+.+.+++++-+ .++.+|
T Consensus       116 ~~k~g~---------------tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        116 RQIPGE---------------SRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CCCcCC---------------CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            433210               01122355777778888888887655 444444

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.61  E-value=0.013  Score=53.81  Aligned_cols=71  Identities=18%  Similarity=0.218  Sum_probs=49.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC--CCcEEEccCCCcc---cHHHHh-cCCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG--ADDLFIGDIRDSN---SIIPAI-QGIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~---~~~~~l-~~~d~Vi~~a  155 (331)
                      .+|||.||+|.+|..+++.+...  |. +|+++++++++.+.+..  +...+ .|..+++   .+.++. .++|+|+++.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~--G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~  232 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLL--GCSRVVGICGSDEKCQLLKSELGFDAA-INYKTDNVAERLRELCPEGVDVYFDNV  232 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCCCCHHHHHHHHCCCCceEEEECC
Confidence            68999999999999999988888  98 79999998877654422  22222 2333322   222222 3689999988


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       233 g  233 (345)
T cd08293         233 G  233 (345)
T ss_pred             C
Confidence            7

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.61  E-value=0.0033  Score=59.17  Aligned_cols=73  Identities=23%  Similarity=0.283  Sum_probs=55.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+++|+|.|+ |.+|+.+++.|.+.  |. +++++.|+.++...+.....-  +.+...+++.+.+..+|+||++.+.
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~--g~~~I~V~nRt~~ra~~La~~~~~--~~~~~~~~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTAL--APKQIMLANRTIEKAQKITSAFRN--ASAHYLSELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHhcC--CeEecHHHHHHHhccCCEEEECcCC
Confidence            34688999997 99999999999998  74 799999998776665443210  1222335667888999999999985

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.60  E-value=0.0036  Score=59.37  Aligned_cols=72  Identities=28%  Similarity=0.338  Sum_probs=53.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...++|+|+|+ |.+|..+++.|...  |. +|+++.|++++...+.....   ++..+.+++.+.+.++|+||.+.+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~--G~~~V~v~~r~~~ra~~la~~~g---~~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEK--GVRKITVANRTLERAEELAEEFG---GEAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcC---CcEeeHHHHHHHhccCCEEEECCCC
Confidence            34678999996 99999999999988  87 79999999877654433221   1222335566778899999999874

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.58  E-value=0.01  Score=55.21  Aligned_cols=111  Identities=15%  Similarity=0.106  Sum_probs=65.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-----eEEE--E--ecCCchhhhc----CCCC-cEEEccCCCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-----AARG--L--VRTEESKQKI----GGAD-DLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-----~V~~--l--~R~~~~~~~l----~~~~-~~v~~Dl~d~~~~~~~l~~  147 (331)
                      .-||.|+|++|.+|.+++-.|+..  +.     +|.+  +  ++++++.+..    .+.. .+. .++.=...-.+.+++
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~--~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~-~~v~i~~~~y~~~kd  120 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASG--EVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLL-REVSIGIDPYEVFED  120 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhc--cccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhc-CceEEecCCHHHhCC
Confidence            458999999999999999999987  43     2333  3  6666554321    1111 000 011100011356889


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCe-EEEEc
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQ-IVLVG  210 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~-~v~~S  210 (331)
                      +|+||..||.....+.        +       -.+....|....+.+.+.++++. -.- +|.+|
T Consensus       121 aDIVVitAG~prkpg~--------t-------R~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       121 ADWALLIGAKPRGPGM--------E-------RADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             CCEEEECCCCCCCCCC--------C-------HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            9999999997433211        1       11223667888888888888854 443 44444

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.58  E-value=0.0029  Score=51.41  Aligned_cols=70  Identities=21%  Similarity=0.263  Sum_probs=48.5

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC---C-----CcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG---A-----DDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~---~-----~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ||.|.|| |..|.+++..|.++  |++|++..|+++..+.+..   +     -......+.=..++.++++++|+|+...
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~--g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADN--GHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAV   77 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHC--TEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S
T ss_pred             CEEEECc-CHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecc
Confidence            5889996 99999999999999  9999999999866554321   0     0111112222456788999999999776


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      -
T Consensus        78 P   78 (157)
T PF01210_consen   78 P   78 (157)
T ss_dssp             -
T ss_pred             c
Confidence            3

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.57  E-value=0.0082  Score=55.98  Aligned_cols=67  Identities=16%  Similarity=0.276  Sum_probs=54.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh-hcCCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-KIGGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      +++|+|.|| |.+|+-++..+.+.  |++|++++.++.... ...  -.++.+|+.|.+.+.++++.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~l--G~~v~~~d~~~~~pa~~~a--d~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPL--GYKVIVLDPDPDSPAAQVA--DEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCEEEEEeCCCCCchhHhC--ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            468999998 89999999999999  999999998764422 121  34667899999999999999998753

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.57  E-value=0.0058  Score=55.49  Aligned_cols=72  Identities=18%  Similarity=0.214  Sum_probs=49.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC----Cc-EEE--------ccCCCcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA----DD-LFI--------GDIRDSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~----~~-~v~--------~Dl~d~~~~~~~l~~~  148 (331)
                      .++|.|+|+ |.+|..++..|++.  |++|++++++++..+.+...    .. ...        ..+.-..+..++++++
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~a   80 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARK--GLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGA   80 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccC
Confidence            367999986 99999999999999  99999999988665443221    00 000        0111123456677899


Q ss_pred             CEEEEccc
Q 046297          149 DALIILTS  156 (331)
Q Consensus       149 d~Vi~~ag  156 (331)
                      |+||-+.-
T Consensus        81 DlVi~av~   88 (311)
T PRK06130         81 DLVIEAVP   88 (311)
T ss_pred             CEEEEecc
Confidence            99998874

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.56  E-value=0.0041  Score=58.85  Aligned_cols=72  Identities=21%  Similarity=0.147  Sum_probs=53.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+++|+|+|+ |.+|..+++.|...  | .+|+++.|+.++...+...+.....   +.+++.+++.++|+||.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~--G~~~V~v~~rs~~ra~~la~~~g~~~i---~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRK--GVGKILIANRTYERAEDLAKELGGEAV---KFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCCeEe---eHHHHHHHHhhCCEEEECCCC
Confidence            34678999997 99999999999998  8 7899999998765544322211111   224577788899999999764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.55  E-value=0.023  Score=50.20  Aligned_cols=104  Identities=20%  Similarity=0.232  Sum_probs=76.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEE-EccCCCcccHHHHhc-----CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLF-IGDIRDSNSIIPAIQ-----GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v-~~Dl~d~~~~~~~l~-----~~d~Vi~~a  155 (331)
                      +.+|+|-||+|-+|+-+-+-..-.  |+.|++..-++++..-+....-+- ..|..++.++.++++     ++|+-+.|.
T Consensus       154 geTv~VSaAsGAvGql~GQ~Ak~~--Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV  231 (343)
T KOG1196|consen  154 GETVFVSAASGAVGQLVGQFAKLM--GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV  231 (343)
T ss_pred             CCEEEEeeccchhHHHHHHHHHhc--CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence            578999999999999888777777  999999999998877665543332 446666656777774     789999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                      |.                             +  ....++..++.+|  |+++.+-...++...|
T Consensus       232 GG-----------------------------~--~lDavl~nM~~~g--ri~~CG~ISqYN~~~~  263 (343)
T KOG1196|consen  232 GG-----------------------------K--MLDAVLLNMNLHG--RIAVCGMISQYNLENP  263 (343)
T ss_pred             Cc-----------------------------H--HHHHHHHhhhhcc--ceEeeeeehhccccCC
Confidence            84                             1  1345666667665  7888776666666655

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.55  E-value=0.022  Score=43.99  Aligned_cols=70  Identities=16%  Similarity=0.284  Sum_probs=43.6

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhh---cCCCCc-EEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQK---IGGADD-LFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~---l~~~~~-~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +|.|+|++|.+|..+++.|.+.+ ++++.++ .|+.++.+.   ..+.+. .+..++ +.+.+.  ..++|+||.+.+.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~-~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~~   75 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHP-DFEVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLALPH   75 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCC-CceEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcCCc
Confidence            48899999999999999999853 8888887 443222211   112121 212222 223333  2589999998863

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK07411 hypothetical protein; Validated

Probab=96.55  E-value=0.023  Score=53.30  Aligned_cols=72  Identities=15%  Similarity=0.131  Sum_probs=47.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCC--CcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGA--DDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~--~~~v  131 (331)
                      ...+|+|+|+ |.+|.++++.|...  |. ++++++.+.-...                          ++.+.  ++.+
T Consensus        37 ~~~~VlivG~-GGlG~~va~~La~~--Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         37 KAASVLCIGT-GGLGSPLLLYLAAA--GIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            3568999996 99999999999999  66 4666665421111                          11122  3334


Q ss_pred             EccCCCcccHHHHhcCCCEEEEccc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ...++. +...+.+.++|+||.+..
T Consensus       114 ~~~~~~-~~~~~~~~~~D~Vvd~~d  137 (390)
T PRK07411        114 ETRLSS-ENALDILAPYDVVVDGTD  137 (390)
T ss_pred             ecccCH-HhHHHHHhCCCEEEECCC
Confidence            444443 346677889999999975

>PRK14851 hypothetical protein; Provisional

Probab=96.53  E-value=0.023  Score=56.84  Aligned_cols=97  Identities=13%  Similarity=0.183  Sum_probs=62.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC---chhh-----------------------hcCCC--CcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE---ESKQ-----------------------KIGGA--DDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~---~~~~-----------------------~l~~~--~~~v  131 (331)
                      ...+|+|.|+ |++|+++++.|...  |. ++++++.+.   ++++                       ++.+.  ++.+
T Consensus        42 ~~~~VlIvG~-GGlGs~va~~Lar~--GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         42 AEAKVAIPGM-GGVGGVHLITMVRT--GIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             hcCeEEEECc-CHHHHHHHHHHHHh--CCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            3678999995 99999999999999  65 456665432   1111                       11222  4455


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      ...++ ++.+.+.++++|+||.+.-.                            ..+..-..+.+.|++.++ .+|..+
T Consensus       119 ~~~i~-~~n~~~~l~~~DvVid~~D~----------------------------~~~~~r~~l~~~c~~~~i-P~i~~g  167 (679)
T PRK14851        119 PAGIN-ADNMDAFLDGVDVVLDGLDF----------------------------FQFEIRRTLFNMAREKGI-PVITAG  167 (679)
T ss_pred             ecCCC-hHHHHHHHhCCCEEEECCCC----------------------------CcHHHHHHHHHHHHHCCC-CEEEee
Confidence            55564 45678889999999977631                            123334567778888887 455544

>PRK14852 hypothetical protein; Provisional

Probab=96.53  E-value=0.021  Score=58.59  Aligned_cols=99  Identities=15%  Similarity=0.127  Sum_probs=64.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchh--------------------------hhcCCC--CcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESK--------------------------QKIGGA--DDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~--------------------------~~l~~~--~~~v  131 (331)
                      ...+|+|.|+ |++|+.+++.|...  |. ++++++.+.=..                          .++.+.  ++.+
T Consensus       331 ~~srVlVvGl-GGlGs~ia~~LAra--GVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        331 LRSRVAIAGL-GGVGGIHLMTLART--GIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             hcCcEEEECC-cHHHHHHHHHHHHc--CCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            4678999995 99999999999999  65 466665432111                          112222  3344


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ...+ +++.+.+.++++|+||.+.-.                            ..+.....+.+.|.+.++ .+|..++
T Consensus       408 ~~~I-~~en~~~fl~~~DiVVDa~D~----------------------------~~~~~rr~l~~~c~~~~I-P~I~ag~  457 (989)
T PRK14852        408 PEGV-AAETIDAFLKDVDLLVDGIDF----------------------------FALDIRRRLFNRALELGI-PVITAGP  457 (989)
T ss_pred             ecCC-CHHHHHHHhhCCCEEEECCCC----------------------------ccHHHHHHHHHHHHHcCC-CEEEeec
Confidence            4444 456688888999999987642                            123334567778888886 5665555


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       458 ~  458 (989)
T PRK14852        458 L  458 (989)
T ss_pred             c
Confidence            3

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.52  E-value=0.0041  Score=45.74  Aligned_cols=64  Identities=16%  Similarity=0.166  Sum_probs=47.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCC---CeEEEE-ecCCchhhhcCCCCc--EEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQ---YAARGL-VRTEESKQKIGGADD--LFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g---~~V~~l-~R~~~~~~~l~~~~~--~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ||.|.| +|.+|..|++.|++.  |   ++|... .|++++..++..+..  ++.      .+..++++.+|+||.+.-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~--g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLAS--GIKPHEVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHT--TS-GGEEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHC--CCCceeEEeeccCcHHHHHHHHHhhcccccc------CChHHhhccCCEEEEEEC
Confidence            577885 699999999999999  8   999955 999988877644322  221      235667778999999874

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.51  E-value=0.021  Score=51.69  Aligned_cols=109  Identities=17%  Similarity=0.080  Sum_probs=66.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh--c---CCC-CcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK--I---GGA-DDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~--l---~~~-~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ++|.|+|+ |.+|..++..|+.+  |+ +|+++++.++....  +   ... .......+.-..++.+ ++++|+||.++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~--g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIita   77 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEK--ELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITA   77 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHc--CCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcC
Confidence            57999996 99999999999998  66 89999986543221  1   010 0001111221223444 68999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      |.....+.        ..       .+....|....+.+++.+.+++-+ .+|.+|
T Consensus        78 g~p~~~~~--------sR-------~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        78 GLPRKPGM--------SR-------EDLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             CCCCCcCC--------CH-------HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            96332110        00       011245777788888888877544 344444

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.51  E-value=0.031  Score=48.93  Aligned_cols=94  Identities=22%  Similarity=0.278  Sum_probs=68.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---CCCCcEEEccCCCcccHHHHhc--CCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---GGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~  157 (331)
                      |+|||.|||+ =|+.|++.|.++  |+ |++.+-..-....+   .....++.+-+.|.+.+.+.++  +++.||+..-+
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~--g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHP   76 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEA--GY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHP   76 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhc--CC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence            6899999986 499999999999  88 55544433222222   1346788888889999999985  79999999864


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEE
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVL  208 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~  208 (331)
                      .                            -....+++.++|++.|+..+=|
T Consensus        77 f----------------------------A~~is~na~~a~~~~~ipylR~   99 (249)
T PF02571_consen   77 F----------------------------AAEISQNAIEACRELGIPYLRF   99 (249)
T ss_pred             h----------------------------HHHHHHHHHHHHhhcCcceEEE
Confidence            2                            2334678888888888764444

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.51  E-value=0.0049  Score=51.79  Aligned_cols=66  Identities=12%  Similarity=0.025  Sum_probs=43.0

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +..+||+|.||+.++++|.+.  ||+|++-.|+.++ ...........   + ..-...++.+.+|+|+-..-
T Consensus         3 ~~~i~GtGniG~alA~~~a~a--g~eV~igs~r~~~~~~a~a~~l~~~---i-~~~~~~dA~~~aDVVvLAVP   69 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKA--GHEVIIGSSRGPKALAAAAAALGPL---I-TGGSNEDAAALADVVVLAVP   69 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhC--CCeEEEecCCChhHHHHHHHhhccc---c-ccCChHHHHhcCCEEEEecc
Confidence            444556899999999999999  9999998776554 33222111000   1 12235567788999987663

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.51  E-value=0.0047  Score=51.26  Aligned_cols=69  Identities=19%  Similarity=0.209  Sum_probs=49.1

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...+++|.|+| .|.||+.+++.|..-  |.+|++.+|.......... ..+      ...++.++++.+|+|+.+...
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~-~~~------~~~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKAF--GMRVIGYDRSPKPEEGADE-FGV------EYVSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHHT--T-EEEEEESSCHHHHHHHH-TTE------EESSHHHHHHH-SEEEE-SSS
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeecC--CceeEEecccCChhhhccc-ccc------eeeehhhhcchhhhhhhhhcc
Confidence            34578999998 599999999999998  9999999999765431111 111      234577888999999888764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.50  E-value=0.021  Score=51.49  Aligned_cols=72  Identities=22%  Similarity=0.302  Sum_probs=54.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC---CCcEEE-----ccCCCcccHHHHhcCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG---ADDLFI-----GDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~---~~~~v~-----~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      +++|.|.|+ |--|.+|++.|.++  ||+|+.-.|+++-.+++..   +..+.+     .++.-..++.++++++|+|+.
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~n--g~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~   77 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARN--GHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVI   77 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhc--CCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEE
Confidence            367999996 88899999999999  9999999999876655422   233332     233345678899999999987


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      ...
T Consensus        78 avP   80 (329)
T COG0240          78 AVP   80 (329)
T ss_pred             ECC
Confidence            764

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.50  E-value=0.0045  Score=55.40  Aligned_cols=72  Identities=15%  Similarity=0.118  Sum_probs=51.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCC----cEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGAD----DLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~----~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ..++|+|.|+ |..|+.++..|++.  |. +|+++.|+.++.+.+....    ....  +...+++...+.++|+|||+.
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~--G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaT  198 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASL--GVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTV  198 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECC
Confidence            4678999986 99999999999999  86 6999999988776653321    1111  111133445567899999997


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      ..
T Consensus       199 p~  200 (282)
T TIGR01809       199 PA  200 (282)
T ss_pred             CC
Confidence            65

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.50  E-value=0.023  Score=51.32  Aligned_cols=103  Identities=23%  Similarity=0.246  Sum_probs=59.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCC--chh-hhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTE--ESK-QKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~--~~~-~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +++|.|.||||.+|+.+++.|.++.+... +.++....  .+. -.+.+...-+.-|..|...    ++++|+++.++|.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~~----~~~~Divf~~ag~   76 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEFV----FSDVDIVFFAAGG   76 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCccccccccc----cccCCEEEEeCch
Confidence            36899999999999999999999633333 44444332  221 1111111111222222222    3489999999974


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                                                   ++  .+.+...+.++|+ -+|=-||+.-.+++-|
T Consensus        77 -----------------------------~~--s~~~~p~~~~~G~-~VIdnsSa~Rm~~DVP  107 (334)
T COG0136          77 -----------------------------SV--SKEVEPKAAEAGC-VVIDNSSAFRMDPDVP  107 (334)
T ss_pred             -----------------------------HH--HHHHHHHHHHcCC-EEEeCCcccccCCCCC
Confidence                                         12  4778888888884 3444445544455544

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.50  E-value=0.03  Score=51.25  Aligned_cols=96  Identities=16%  Similarity=0.161  Sum_probs=59.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhc-CCCCeEEEEecCCchhhh--cCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVRTEESKQK--IGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R~~~~~~~--l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..++|.|.||||++|..+++.|.++ .|..++..+....+.-+.  +......++ |+   +.  ..+.++|+||.+++.
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~-~~---~~--~~~~~~Dvvf~a~p~   76 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQ-DA---AE--FDWSQAQLAFFVAGR   76 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEE-eC---ch--hhccCCCEEEECCCH
Confidence            3578999999999999999999985 346677777554322111  211111111 22   21  123678999988863


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~  214 (331)
                                                     .....++..+.+.|+ ++|=.|+..-
T Consensus        77 -------------------------------~~s~~~~~~~~~~g~-~VIDlS~~fR  101 (336)
T PRK08040         77 -------------------------------EASAAYAEEATNAGC-LVIDSSGLFA  101 (336)
T ss_pred             -------------------------------HHHHHHHHHHHHCCC-EEEECChHhc
Confidence                                           124566776666776 5666666653

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.50  E-value=0.0037  Score=60.12  Aligned_cols=71  Identities=14%  Similarity=0.144  Sum_probs=49.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+++++|+|+ |.+|+.++..|.+.  |++|++..|+.++.+.+.........++.+   +. .+.++|+||++...
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~--G~~V~i~~R~~~~~~~la~~~~~~~~~~~~---~~-~l~~~DiVInatP~  400 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARA--GAELLIFNRTKAHAEALASRCQGKAFPLES---LP-ELHRIDIIINCLPP  400 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccceechhH---hc-ccCCCCEEEEcCCC
Confidence            35678999996 89999999999999  999999999877665543221111122222   11 24689999999854

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.49  E-value=0.018  Score=53.85  Aligned_cols=71  Identities=14%  Similarity=0.036  Sum_probs=48.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcE-E-----------EccCCCcccHHHHhcCCCE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDL-F-----------IGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~-v-----------~~Dl~d~~~~~~~l~~~d~  150 (331)
                      |+|.|.| .|++|.-++. +++.  ||+|+++++++++.+.+..+... .           .+.++...+..++++++|+
T Consensus         1 mkI~VIG-lGyvGl~~A~-~lA~--G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~   76 (388)
T PRK15057          1 MKITISG-TGYVGLSNGL-LIAQ--NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADY   76 (388)
T ss_pred             CEEEEEC-CCHHHHHHHH-HHHh--CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCE
Confidence            4688997 6999999995 5567  89999999999888776542111 0           1112222234456688999


Q ss_pred             EEEcccC
Q 046297          151 LIILTSA  157 (331)
Q Consensus       151 Vi~~ag~  157 (331)
                      ||-+..-
T Consensus        77 vii~Vpt   83 (388)
T PRK15057         77 VIIATPT   83 (388)
T ss_pred             EEEeCCC
Confidence            9998753

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.49  E-value=0.015  Score=55.97  Aligned_cols=73  Identities=16%  Similarity=0.227  Sum_probs=53.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCc------------cc--------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDS------------NS--------  140 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~------------~~--------  140 (331)
                      ..+|+|+|+ |-+|...+..+...  |.+|+++++++++++.... +.+++..|..+.            ++        
T Consensus       165 g~kVlViGa-G~iGL~Ai~~Ak~l--GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        165 PAKVLVIGA-GVAGLAAIGAAGSL--GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            678999996 99999999999999  9999999999887665433 345444443221            11        


Q ss_pred             HHHHhcCCCEEEEcccC
Q 046297          141 IIPAIQGIDALIILTSA  157 (331)
Q Consensus       141 ~~~~l~~~d~Vi~~ag~  157 (331)
                      +.+.++++|+||.+++.
T Consensus       242 ~~~~~~gaDVVIetag~  258 (509)
T PRK09424        242 FAEQAKEVDIIITTALI  258 (509)
T ss_pred             HHhccCCCCEEEECCCC
Confidence            12223579999999986

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.47  E-value=0.01  Score=52.88  Aligned_cols=73  Identities=19%  Similarity=0.275  Sum_probs=53.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh-cCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-IGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .++.|.|+|+.| +|.-=++...+-  |++|++++++..+.++ ++. +.+++..-..|++.+.++.+-.|.++|.+.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAM--G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~  255 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAM--GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVS  255 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHh--CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeee
Confidence            367899999988 999888888888  9999999999855444 332 345554333477777777776677777665

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.46  E-value=0.0047  Score=57.56  Aligned_cols=72  Identities=28%  Similarity=0.334  Sum_probs=60.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      -..++|||+|| |-+|.-++++|.++  | .+|+++.|+.++..++...+.   +++...+.+.+.+..+|+||.+.|.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~--g~~~i~IaNRT~erA~~La~~~~---~~~~~l~el~~~l~~~DvVissTsa  248 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEK--GVKKITIANRTLERAEELAKKLG---AEAVALEELLEALAEADVVISSTSA  248 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhC--CCCEEEEEcCCHHHHHHHHHHhC---CeeecHHHHHHhhhhCCEEEEecCC
Confidence            35788999997 99999999999999  7 689999999988887755444   5555567788889999999999875

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.46  E-value=0.024  Score=49.54  Aligned_cols=111  Identities=16%  Similarity=0.081  Sum_probs=67.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC-----chhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE-----ESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~-----~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ..||.|.||.|+||+-|.-.|...+ .. +....+-..     ..+.++..+.  ....+.-++.+.++++++|+|+.-|
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK~np-~Vs~LaLYDi~~~~GVaaDlSHI~T~s--~V~g~~g~~~L~~al~~advVvIPA  104 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLKLNP-LVSELALYDIANTPGVAADLSHINTNS--SVVGFTGADGLENALKGADVVVIPA  104 (345)
T ss_pred             cceEEEEecCCccCccHHHHHhcCc-ccceeeeeecccCCcccccccccCCCC--ceeccCChhHHHHHhcCCCEEEecC
Confidence            5689999999999999987665442 22 222222221     1112222222  2233444668999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      |..+..+..      +         .+.+++|-...+.+..++.+.--+ .+.++|
T Consensus       105 GVPRKPGMT------R---------DDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  105 GVPRKPGMT------R---------DDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             CCCCCCCCc------H---------HHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            985553321      1         122367777788888888776443 344444

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.45  E-value=0.029  Score=51.14  Aligned_cols=116  Identities=9%  Similarity=0.094  Sum_probs=68.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh--c--CCCCcEEE--ccCCCcccHHHHhcCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK--I--GGADDLFI--GDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~--l--~~~~~~v~--~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      .+||.|+|| |.+|+.++..++..  |. +|++++++++....  +  .....+..  ..+.-..++ +.++++|+||..
T Consensus         6 ~~KI~IIGa-G~vG~~ia~~la~~--gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t   81 (321)
T PTZ00082          6 RRKISLIGS-GNIGGVMAYLIVLK--NLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT   81 (321)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence            468999995 99999999999988  74 89999998764321  1  00000000  011111223 467999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEcc
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGS  211 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS  211 (331)
                      +|......  .+..++.+        .+....|+...+.+++.+.+..-+ .++.+|-
T Consensus        82 ag~~~~~~--~~~~~~~r--------~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         82 AGLTKRPG--KSDKEWNR--------DDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             CCCCCCCC--CCcCCCCH--------HHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            98743211  00000010        111244677778888888887755 5666553

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.45  E-value=0.01  Score=53.39  Aligned_cols=38  Identities=21%  Similarity=0.214  Sum_probs=33.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ  122 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~  122 (331)
                      .++|.|+|+ |.+|..++..|+.+  |++|++++++++..+
T Consensus         3 i~~I~ViGa-G~mG~~iA~~la~~--G~~V~l~d~~~~~l~   40 (291)
T PRK06035          3 IKVIGVVGS-GVMGQGIAQVFART--GYDVTIVDVSEEILK   40 (291)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhc--CCeEEEEeCCHHHHH
Confidence            367999986 99999999999999  999999999987654

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.44  E-value=0.025  Score=52.39  Aligned_cols=72  Identities=13%  Similarity=0.075  Sum_probs=49.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchhhhcCC-CCcEEEccCCCccc---HHHHhc--CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESKQKIGG-ADDLFIGDIRDSNS---IIPAIQ--GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~---~~~~l~--~~d~Vi~~  154 (331)
                      ..+|||.|+ |.+|...++.+...  |.+ |+++++++++.+.+.. +... ..|..+++.   +.+...  ++|+|+.+
T Consensus       177 g~~VlV~G~-g~vG~~a~~~ak~~--G~~~Vi~~~~~~~~~~~~~~~Ga~~-~i~~~~~~~~~~i~~~~~~~g~d~vid~  252 (358)
T TIGR03451       177 GDSVAVIGC-GGVGDAAIAGAALA--GASKIIAVDIDDRKLEWAREFGATH-TVNSSGTDPVEAIRALTGGFGADVVIDA  252 (358)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHcCCce-EEcCCCcCHHHHHHHHhCCCCCCEEEEC
Confidence            578999985 99999999988888  885 8889888877655432 1222 224433332   333332  58999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      .|.
T Consensus       253 ~g~  255 (358)
T TIGR03451       253 VGR  255 (358)
T ss_pred             CCC
Confidence            883

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.43  E-value=0.024  Score=48.09  Aligned_cols=69  Identities=12%  Similarity=0.008  Sum_probs=48.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCC--CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGG--ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~--~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+++|||+|| |-+|...++.|++.  |++|+++.+.... ...+.+  .+.+..-++.     ...++++|+||-+.+
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~--ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaaT~   79 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKY--GAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAATN   79 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEcCC
Confidence            45789999997 99999999999999  9999999876432 233322  2444443332     233678898887765

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.42  E-value=0.16  Score=48.55  Aligned_cols=188  Identities=12%  Similarity=0.138  Sum_probs=100.0

Q ss_pred             CCCCeEEEECC----------------CChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHH
Q 046297           80 MAKSTVLVTGA----------------GGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP  143 (331)
Q Consensus        80 ~~~~~VlVtGa----------------tG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~  143 (331)
                      ..+++||||+|                ||..|.+|++.+..+  |++|+.+.-.-. .. .+.+++++.  +...+++.+
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~--GA~VtlI~Gp~~-~~-~p~~v~~i~--V~ta~eM~~  327 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAA--GAEVTLISGPVD-LA-DPQGVKVIH--VESARQMLA  327 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHC--CCcEEEEeCCcC-CC-CCCCceEEE--ecCHHHHHH
Confidence            56889999965                689999999999999  999998874322 11 233455554  444555555


Q ss_pred             Hhc---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCC
Q 046297          144 AIQ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLN  218 (331)
Q Consensus       144 ~l~---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~  218 (331)
                      ++.   ..|++|++|+............++..      +........+.-+..++..+.+..  -++ +.++-..   |.
T Consensus       328 av~~~~~~Di~I~aAAVaDyrp~~~~~~KiKk------~~~~~~~L~L~~nPDIL~~l~~~~~~~~~-~lVGFaa---Et  397 (475)
T PRK13982        328 AVEAALPADIAIFAAAVADWRVATEGGQKLKK------GAAGPPPLQLVENPDILATISKLAENRPP-LVIGFAA---ET  397 (475)
T ss_pred             HHHhhCCCCEEEEeccccceeeccccccccCc------CCCCCceeeeeeCcHHHHHHhhhcccCCC-EEEEEcc---Cc
Confidence            553   47999999997544321111111110      000111122222345555555421  123 3344322   11


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHhcCCCEEEEecC----cccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG----GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~----~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                      .           .-...+.+-+++.+.++++...-    ..+|.+.+...++...........++..+=.++|+.++..+
T Consensus       398 ~-----------~l~~~A~~KL~~K~~D~IvaN~v~~~~~gfg~d~n~v~ii~~~g~~~~~~~~~~~sK~~iA~~Il~~i  466 (475)
T PRK13982        398 E-----------HLIDNARAKLARKGCDWIVANDVSPATGVMGGDRNTVHLLSRDGDAEKVESWPVMTKDEVATALVARI  466 (475)
T ss_pred             h-----------hHHHHHHHHHHHcCCCEEEEccCCcCCCCcCCCccEEEEEECCCCccceeEcCCCCHHHHHHHHHHHH
Confidence            1           11233445566789999887642    23455444333333221100001233346689999988866

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.41  E-value=0.029  Score=53.82  Aligned_cols=75  Identities=7%  Similarity=0.057  Sum_probs=54.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC-cEEEcc------------CCCcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGD------------IRDSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~-~~v~~D------------l~d~~~~~~~l~~~  148 (331)
                      +|+|.|.| .|++|..++-.|.+.++|++|++++.++++.+.+..+. .+.+-+            +.-..++.++++++
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            47899997 59999999999999844688999999998887764431 111111            11123355667889


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |++|-|.+.
T Consensus        80 dvi~I~V~T   88 (473)
T PLN02353         80 DIVFVSVNT   88 (473)
T ss_pred             CEEEEEeCC
Confidence            999999874

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.41  E-value=0.036  Score=50.84  Aligned_cols=97  Identities=19%  Similarity=0.278  Sum_probs=58.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCe---EEEEecCCchhh--hcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYA---ARGLVRTEESKQ--KIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~---V~~l~R~~~~~~--~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .++|.|.||||++|+.+++.|.+.+ ...   +..+......-+  .+... ....-++ |++    .++++|+|+.+++
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~-~f~v~~l~~~aS~~saGk~~~~~~~-~l~v~~~-~~~----~~~~~Divf~a~~   77 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKET-KFNIAEVTLLSSKRSAGKTVQFKGR-EIIIQEA-KIN----SFEGVDIAFFSAG   77 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCC-CCCcccEEEEECcccCCCCeeeCCc-ceEEEeC-CHH----HhcCCCEEEECCC
Confidence            4689999999999999999988642 666   555554322111  12221 2222222 222    2468999999886


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~  217 (331)
                      .                               .....+...+.+.|. .+|=.||..-.++
T Consensus        78 ~-------------------------------~~s~~~~~~~~~~G~-~VID~Ss~fR~~~  106 (347)
T PRK06728         78 G-------------------------------EVSRQFVNQAVSSGA-IVIDNTSEYRMAH  106 (347)
T ss_pred             h-------------------------------HHHHHHHHHHHHCCC-EEEECchhhcCCC
Confidence            3                               125667777777775 5666666653333

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.39  E-value=0.032  Score=50.62  Aligned_cols=67  Identities=19%  Similarity=0.217  Sum_probs=51.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+++|.|.| .|.||+.+++.|..-  |++|++.+|..+...    .+..+    ...+++.++++++|+|+.+...
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~af--G~~V~~~~~~~~~~~----~~~~~----~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQTW--GFPLRCWSRSRKSWP----GVQSF----AGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCCCCCC----Cceee----cccccHHHHHhcCCEEEECCCC
Confidence            3568999999 699999999999998  999999998654321    11111    1345788999999999988753

>PRK05678 succinyl-CoA synthetase subunit alpha; Validated

Probab=96.39  E-value=0.5  Score=42.39  Aligned_cols=91  Identities=18%  Similarity=0.131  Sum_probs=61.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCCCcEEEccCCCcccHHHHhcC--CCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGADDLFIGDIRDSNSIIPAIQG--IDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~ag~  157 (331)
                      ++.+|+|.|-||.+|..+.+.|++-  |++++ .--++.+ .++.        ..+.-..++.++-+.  +|.++.+...
T Consensus         7 ~~~~~~v~~~~~~~g~~~l~~l~~~--g~~~v-~pVnp~~~~~~v--------~G~~~y~sv~dlp~~~~~DlAvi~vp~   75 (291)
T PRK05678          7 KDTKVIVQGITGKQGTFHTEQMLAY--GTNIV-GGVTPGKGGTTV--------LGLPVFNTVAEAVEATGANASVIYVPP   75 (291)
T ss_pred             CCCeEEEeCCCchHHHHHHHHHHHC--CCCEE-EEECCCCCCCeE--------eCeeccCCHHHHhhccCCCEEEEEcCH
Confidence            3568999999999999999999997  77633 2222221 1111        122223446666565  8999887742


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                     ..+..+++.|.+.|+|.+|.+|+-.
T Consensus        76 -------------------------------~~v~~~l~e~~~~gvk~avI~s~Gf  100 (291)
T PRK05678         76 -------------------------------PFAADAILEAIDAGIDLIVCITEGI  100 (291)
T ss_pred             -------------------------------HHHHHHHHHHHHCCCCEEEEECCCC
Confidence                                           2356778888889999988877653

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.38  E-value=0.013  Score=52.96  Aligned_cols=106  Identities=18%  Similarity=0.073  Sum_probs=65.2

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhhhcCCCCcEEEc-----cCCCcccHHHHhcCCCEEEEcccC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQKIGGADDLFIG-----DIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~~l~~~~~~v~~-----Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      |.|.|+ |.+|..++-.|+..  |  .+++++++++++.......+.....     .+.-..+ .+.++++|+||.++|.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~--~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~   76 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAK--GLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGA   76 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhc--CCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCC
Confidence            467886 88999999999998  6  7899999988765432111000000     0000112 3478999999999996


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      ....+.        +       ..+....|+...+.+.+.+++++-+-+|.+
T Consensus        77 p~~~~~--------~-------R~~l~~~n~~i~~~~~~~i~~~~p~~~viv  113 (300)
T cd00300          77 PRKPGE--------T-------RLDLINRNAPILRSVITNLKKYGPDAIILV  113 (300)
T ss_pred             CCCCCC--------C-------HHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            432110        0       111225577778888888888875434333

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.38  E-value=0.031  Score=51.35  Aligned_cols=71  Identities=13%  Similarity=0.080  Sum_probs=49.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc---CCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ---GIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~ag  156 (331)
                      ..+|+|+|+ |.+|...++.+...  |. +|+++++++++.+.+.+ +...+ .|..+.+ +.+..+   ++|+||.+.|
T Consensus       170 g~~VlV~G~-G~vG~~aiqlak~~--G~~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~-~~~~~~~~g~~D~vid~~G  244 (343)
T PRK09880        170 GKRVFVSGV-GPIGCLIVAAVKTL--GAAEIVCADVSPRSLSLAREMGADKL-VNPQNDD-LDHYKAEKGYFDVSFEVSG  244 (343)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEeCCHHHHHHHHHcCCcEE-ecCCccc-HHHHhccCCCCCEEEECCC
Confidence            568999986 99999999988888  87 68889998877655432 22222 3443322 333332   4899999998


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       245 ~  245 (343)
T PRK09880        245 H  245 (343)
T ss_pred             C
Confidence            3

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.36  E-value=0.026  Score=51.72  Aligned_cols=72  Identities=21%  Similarity=0.202  Sum_probs=49.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchhhhcCC-CCcEEEccCCCcc--cHHHHhc--CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESKQKIGG-ADDLFIGDIRDSN--SIIPAIQ--GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~--~~~~~l~--~~d~Vi~~a  155 (331)
                      ..+|||+|+ |.+|..+++.+...  |.+ |+++++++++.+.+.. .+..+ .|..+.+  .+.+...  ++|+|+.+.
T Consensus       164 g~~vlV~G~-G~vG~~~~~~ak~~--G~~~vi~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid~~  239 (339)
T cd08239         164 RDTVLVVGA-GPVGLGALMLARAL--GAEDVIGVDPSPERLELAKALGADFV-INSGQDDVQEIRELTSGAGADVAIECS  239 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhCCCEE-EcCCcchHHHHHHHhCCCCCCEEEECC
Confidence            678999986 99999999998888  888 9999888776654322 12222 2333332  3333333  689999998


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      |.
T Consensus       240 g~  241 (339)
T cd08239         240 GN  241 (339)
T ss_pred             CC
Confidence            73

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.36  E-value=0.0021  Score=53.50  Aligned_cols=36  Identities=25%  Similarity=0.304  Sum_probs=30.8

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ  122 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~  122 (331)
                      +|.|.|| |.+|+.++..++..  |++|++++++++..+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~--G~~V~l~d~~~~~l~   36 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARA--GYEVTLYDRSPEALE   36 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHT--TSEEEEE-SSHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhC--CCcEEEEECChHHHH
Confidence            5889997 99999999999999  999999999986544

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.35  E-value=0.024  Score=50.22  Aligned_cols=66  Identities=11%  Similarity=0.076  Sum_probs=48.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC---CeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ---YAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g---~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      +++|.|+|+ |.+|..+++.|.+.  |   ++|++++|++++.+.+.....+   .+  ..+..++++++|+||-+.
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~--g~~~~~v~v~~r~~~~~~~~~~~~g~---~~--~~~~~~~~~~advVil~v   70 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLAS--GVPAKDIIVSDPSPEKRAALAEEYGV---RA--ATDNQEAAQEADVVVLAV   70 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhC--CCCcceEEEEcCCHHHHHHHHHhcCC---ee--cCChHHHHhcCCEEEEEc
Confidence            568999995 99999999999998  7   7899999998776655332111   11  123445567889998776

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.35  E-value=0.051  Score=49.98  Aligned_cols=97  Identities=18%  Similarity=0.218  Sum_probs=60.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhhcCC--CCcE----------E-EccCCCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQKIGG--ADDL----------F-IGDIRDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~l~~--~~~~----------v-~~Dl~d~~~~~~~l~~  147 (331)
                      +.+|.|.|+ |.||+.+++.+.++ ++.+++++.... +....+..  +...          + ..++.-.+...+++.+
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~-~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~   78 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQ-PDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEK   78 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcC-CCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhcc
Confidence            358999998 99999999988876 488988876533 22221111  0100          0 0011111234556678


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      +|+|+.+.+..                               .....++.+.++| +++|+.++.
T Consensus        79 vDVVIdaT~~~-------------------------------~~~e~a~~~~~aG-k~VI~~~~~  111 (341)
T PRK04207         79 ADIVVDATPGG-------------------------------VGAKNKELYEKAG-VKAIFQGGE  111 (341)
T ss_pred             CCEEEECCCch-------------------------------hhHHHHHHHHHCC-CEEEEcCCC
Confidence            99999998741                               1355667788888 677776664

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=96.35  E-value=0.32  Score=46.17  Aligned_cols=71  Identities=13%  Similarity=0.152  Sum_probs=49.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCc-EEEc---------cCCCcccHHHHhcCCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD-LFIG---------DIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~-~v~~---------Dl~d~~~~~~~l~~~d~V  151 (331)
                      .|+|.|.| .|++|..++..| ..  +|+|+++++++++.+.+..+.. +.+-         .+.-... .+.++++|++
T Consensus         6 ~mkI~vIG-lGyvGlpmA~~l-a~--~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~-~~~~~~advv   80 (425)
T PRK15182          6 EVKIAIIG-LGYVGLPLAVEF-GK--SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSE-IEKIKECNFY   80 (425)
T ss_pred             CCeEEEEC-cCcchHHHHHHH-hc--CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeC-HHHHcCCCEE
Confidence            36799997 799999999995 45  6999999999998888764322 1110         1110111 2356789999


Q ss_pred             EEcccC
Q 046297          152 IILTSA  157 (331)
Q Consensus       152 i~~ag~  157 (331)
                      |-+.+-
T Consensus        81 ii~Vpt   86 (425)
T PRK15182         81 IITVPT   86 (425)
T ss_pred             EEEcCC
Confidence            999874

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=96.34  E-value=0.036  Score=50.53  Aligned_cols=71  Identities=27%  Similarity=0.294  Sum_probs=43.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEc-cCCCcc---cHHHHhc--CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIG-DIRDSN---SIIPAIQ--GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~-Dl~d~~---~~~~~l~--~~d~Vi~~a  155 (331)
                      +++|||||+++..  .+++.|.+.+.|++|++++.++........ -.++.. +..+++   .+.++++  ++|+|+-+.
T Consensus         1 ~~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~~~~~~~-d~~~~~p~~~~~~~~~~l~~~~~~~~id~ii~~~   77 (326)
T PRK12767          1 MMNILVTSAGRRV--QLVKALKKSLLKGRVIGADISELAPALYFA-DKFYVVPKVTDPNYIDRLLDICKKEKIDLLIPLI   77 (326)
T ss_pred             CceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCcchhhHhc-cCcEecCCCCChhHHHHHHHHHHHhCCCEEEECC
Confidence            5789999997666  899999998435999999887543221111 112222 233432   3333333  688888653

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.34  E-value=0.014  Score=51.88  Aligned_cols=57  Identities=16%  Similarity=0.207  Sum_probs=48.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...+++|+|+|+++.+|+-++..|+.+  |.+|+++.+..                    ..+.+.++++|+||...|.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~--gatVtv~~s~t--------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQK--NASVTILHSRS--------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCCc--------------------hhHHHHHhhCCEEEECCCC
Confidence            456899999999999999999999999  99999998752                    2366777888999988875

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.33  E-value=0.028  Score=49.83  Aligned_cols=69  Identities=13%  Similarity=0.148  Sum_probs=46.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEE-EEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAAR-GLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~-~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ++|.|.|. |.+|+.+++.|.+..+++++. +++|++++.+.+.....     ..-.+++.+++.++|+|+.++..
T Consensus         2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~-----~~~~~~~~ell~~~DvVvi~a~~   71 (265)
T PRK13304          2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTG-----AKACLSIDELVEDVDLVVECASV   71 (265)
T ss_pred             CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcC-----CeeECCHHHHhcCCCEEEEcCCh
Confidence            68999995 999999999998862246644 56676665554433211     11123456666889999999853

>PLN02928 oxidoreductase family protein

Probab=96.31  E-value=0.018  Score=53.04  Aligned_cols=75  Identities=17%  Similarity=0.174  Sum_probs=52.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-CCCcEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-GADDLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ..+++|.|+|- |.||+.+++.|...  |.+|++.+|+.......    + ..+.-+........++.++++.+|+|+.+
T Consensus       157 l~gktvGIiG~-G~IG~~vA~~l~af--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        157 LFGKTVFILGY-GAIGIELAKRLRPF--GVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHhhC--CCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence            45789999995 99999999999988  99999999874321110    0 00111111111355788999999999988


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      ...
T Consensus       234 lPl  236 (347)
T PLN02928        234 CTL  236 (347)
T ss_pred             CCC
Confidence            854

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.28  E-value=0.039  Score=50.79  Aligned_cols=100  Identities=15%  Similarity=0.182  Sum_probs=61.3

Q ss_pred             CeEEEECCCChhHHHHHHHHH-hcCCCC---eEEEEecCCchhhh--cCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLK-ERSEQY---AARGLVRTEESKQK--IGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll-~~~~g~---~V~~l~R~~~~~~~--l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ++|.|.||||.+|+.+++.|. ++  .+   +++.+.-.......  +.. .....-++.+.    +.+.++|+++.++|
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~--~fp~~~~~~~ss~~s~g~~~~f~~-~~~~v~~~~~~----~~~~~vDivffa~g   73 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEER--DFDAIRPVFFSTSQLGQAAPSFGG-TTGTLQDAFDI----DALKALDIIITCQG   73 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCC--CCccccEEEEEchhhCCCcCCCCC-CcceEEcCccc----ccccCCCEEEEcCC
Confidence            468999999999999999999 54  44   34444433221111  111 12222333332    23578999999997


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCCCCCCC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGTNLNHP  220 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~~~~~~  220 (331)
                      .                               ...+.+...++++|.. .+|=-||+.-.+++.|
T Consensus        74 ~-------------------------------~~s~~~~p~~~~aG~~~~VIDnSSa~Rmd~dVP  107 (366)
T TIGR01745        74 G-------------------------------DYTNEIYPKLRESGWQGYWIDAASSLRMKDDAV  107 (366)
T ss_pred             H-------------------------------HHHHHHHHHHHhCCCCeEEEECChhhhcCCCCC
Confidence            3                               1367788888889864 4555555554455544

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.27  E-value=0.034  Score=49.65  Aligned_cols=96  Identities=14%  Similarity=0.128  Sum_probs=60.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh--------------------------hcCCCCcEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ--------------------------KIGGADDLFIG  133 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~--------------------------~l~~~~~~v~~  133 (331)
                      ...+|||.|+ |.+|..+++.|...  |. ++++++.+.-...                          ++.+.+.+...
T Consensus        18 ~~s~VLIvG~-gGLG~EiaKnLala--GVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          18 QKSNVLISGL-GGLGVEIAKNLILA--GVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             hcCcEEEEcC-CHHHHHHHHHHHHc--CCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            4568999996 89999999999999  66 4666665431111                          12222222211


Q ss_pred             cCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          134 DIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       134 Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      +   .....+.+.++|+||.+..                              +......+-++|+++++ .||...+.+
T Consensus        95 ~---~~~~~~~l~~fdvVV~~~~------------------------------~~~~~~~in~~c~~~~i-pfI~a~~~G  140 (286)
T cd01491          95 T---GPLTTDELLKFQVVVLTDA------------------------------SLEDQLKINEFCHSPGI-KFISADTRG  140 (286)
T ss_pred             e---ccCCHHHHhcCCEEEEecC------------------------------CHHHHHHHHHHHHHcCC-EEEEEeccc
Confidence            1   1112346678898887753                              45555667788998886 677666553

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.27  E-value=0.027  Score=50.30  Aligned_cols=66  Identities=15%  Similarity=0.171  Sum_probs=46.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |+|.|+| .|.+|..++..|.++  |++|++.+|+++..+.+...-. +  +... ... +.++++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~--g~~V~~~d~~~~~~~~a~~~g~-~--~~~~-~~~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSL--GHTVYGVSRRESTCERAIERGL-V--DEAS-TDL-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCC-c--cccc-CCH-hHhcCCCEEEEcCC
Confidence            4689998 699999999999999  9999999998876655422100 0  1111 112 35678999998874

>PRK07574 formate dehydrogenase; Provisional

Probab=96.23  E-value=0.027  Score=52.56  Aligned_cols=69  Identities=20%  Similarity=0.144  Sum_probs=50.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+++|.|+|. |.||+.+++.|..-  |.+|++.+|.....+.. ...     ++.-..++.++++.+|+|+.+...
T Consensus       190 L~gktVGIvG~-G~IG~~vA~~l~~f--G~~V~~~dr~~~~~~~~-~~~-----g~~~~~~l~ell~~aDvV~l~lPl  258 (385)
T PRK07574        190 LEGMTVGIVGA-GRIGLAVLRRLKPF--DVKLHYTDRHRLPEEVE-QEL-----GLTYHVSFDSLVSVCDVVTIHCPL  258 (385)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEECCCCCchhhH-hhc-----CceecCCHHHHhhcCCEEEEcCCC
Confidence            45789999995 99999999999998  99999999975321111 101     122234578899999999888753

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.22  E-value=0.0085  Score=54.87  Aligned_cols=72  Identities=18%  Similarity=0.216  Sum_probs=48.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC---CcEEEc-----cCCCcccHHHHhcCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA---DDLFIG-----DIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~---~~~v~~-----Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      +|+|.|.|+ |-+|..++..|++.  ||+|++..|+++..+.+...   ...+.+     .+.-.++..++++.+|+|+-
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~--G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~   80 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASK--GVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVV   80 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEE
Confidence            468999985 99999999999999  99999999987655443211   011001     01112345566778888887


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      +.-
T Consensus        81 ~v~   83 (328)
T PRK14618         81 AVP   83 (328)
T ss_pred             ECc
Confidence            764

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.19  E-value=0.038  Score=46.82  Aligned_cols=68  Identities=16%  Similarity=0.232  Sum_probs=41.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ++|.|+|. |.||..+++.+....-+.+ |.+++|+.++..++...+..  ++   ..++.+.+++.|.|+-+|+
T Consensus         1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~--~~---~s~ide~~~~~DlvVEaAS   69 (255)
T COG1712           1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGR--RC---VSDIDELIAEVDLVVEAAS   69 (255)
T ss_pred             CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCC--Cc---cccHHHHhhccceeeeeCC
Confidence            36888985 9999999998775422344 66778887776654322111  11   1334445566666666665

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.18  E-value=0.037  Score=50.28  Aligned_cols=72  Identities=21%  Similarity=0.196  Sum_probs=49.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCccc---HHHHh-cCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNS---IIPAI-QGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~---~~~~l-~~~d~Vi~~a  155 (331)
                      ..+|+|.|++|.+|..+++.+.+.  |.+|+++++++++.+.+..  .+. ...|..+.+.   +.+.. .++|+++++.
T Consensus       146 ~~~vlI~g~~g~ig~~~~~~a~~~--G~~vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~v~~~~~~~~d~vi~~~  222 (329)
T cd05288         146 GETVVVSAAAGAVGSVVGQIAKLL--GARVVGIAGSDEKCRWLVEELGFD-AAINYKTPDLAEALKEAAPDGIDVYFDNV  222 (329)
T ss_pred             CCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhhcCCc-eEEecCChhHHHHHHHhccCCceEEEEcc
Confidence            568999999999999999999998  9999999988766554432  121 1122233222   22222 3689999988


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       223 g  223 (329)
T cd05288         223 G  223 (329)
T ss_pred             h
Confidence            7

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	331
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		1e-118
3e8x_A	236	Putative Nad-Dependent EpimeraseDEHYDRATASE FROM BA		9e-08
2zcu_A	286	Crystal Structure Of A New Type Of Nadph-Dependent		8e-04

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score =  421 bits (1081), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 222/248 (89%)
Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP 143
           TVLVTGA GRTGQIVYKKLKE S+++ A+GLVR+ + K+KIGG  D+FIGDI D++SI P
Sbjct: 6   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 65
Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
           A QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAAK AG 
Sbjct: 66  AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125
Query: 204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
           K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DKEGG+R
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR 185
Query: 264 ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKAL 323
           ELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTKDFKAL
Sbjct: 186 ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKAL 245
Query: 324 FSQITTRF 331
           FSQ+T+RF
Sbjct: 246 FSQVTSRF 253

>pdb|3E8X|A Chain A, Putative Nad-Dependent EpimeraseDEHYDRATASE FROM BACILLUS HALODURANS Length = 236

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNSII 142
           VLV GA G+  + +  +LK +  +  A   VR EE   ++   GA D+ + ++ +  S  
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHEPVA--XVRNEEQGPELRERGASDIVVANLEEDFS-- 79
Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A   IDA++    + P    D                     +D  G    I  A+  G
Sbjct: 80  HAFASIDAVVFAAGSGPHTGADKTIL-----------------IDLWGAIKTIQEAEKRG 122
Query: 203 AKQIVLVGSMGGTNLNH-PLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG 261
            K+ + V S+G  + +  P N     + LV KR A+  L  S + YTI+R G L ++E  
Sbjct: 123 IKRFIXVSSVGTVDPDQGPXNXR---HYLVAKRLADDELKRSSLDYTIVRPGPLSNEEST 179
Query: 262 IRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDL 306
            +  +     E+    TR+I R DVA+V  + +  +    K F++
Sbjct: 180 GKVTVSPHFSEI----TRSITRHDVAKVIAELVDQQHTIGKTFEV 220

>pdb|2ZCU|A Chain A, Crystal Structure Of A New Type Of Nadph-Dependent Quinone Oxidoreductase (Qor2) From Escherichia Coli Length = 286

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 44/175 (25%)
Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFI--GDIRDSNSII 142
           + +TGA G+ G  V + L +         +VR     Q +  A  + +   D  D  ++ 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDEAALT 60
Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A+QG++ L++++S+                    E G    Q      +N I+AAKAAG
Sbjct: 61  SALQGVEKLLLISSS--------------------EVGQRAPQ-----HRNVINAAKAAG 95
Query: 203 AKQIVLVGSMGGTNLNH----PLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG 253
            K I        T+L H    PL  L + +I     + E+ LADSGI YT++R G
Sbjct: 96  VKFIAY------TSLLHADTSPLG-LADEHI-----ETEKMLADSGIVYTLLRNG 138

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	331
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	5e-56
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-47
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-45
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-35
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	5e-28
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-24
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	1e-22
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-20
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	7e-20
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	4e-19
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	9e-19
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-18
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-17
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-16
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-16
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-14
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	4e-14
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	1e-13
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-12
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-11
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-10
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-07
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-07
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	4e-07
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	4e-07
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-06
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	2e-06
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	6e-06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	6e-06
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	8e-05
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	8e-04

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  277 bits (710), Expect = 2e-93
 Identities = 203/253 (80%), Positives = 223/253 (88%)

Query: 79  SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDS 138
           S    TVLVTGA GRTGQIVYKKLKE S+++ A+GLVR+ + K+KIGG  D+FIGDI D+
Sbjct: 1   SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDA 60

Query: 139 NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA 198
           +SI PA QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAA
Sbjct: 61  DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA 120

Query: 199 KAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDK 258
           K AG K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DK
Sbjct: 121 KVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK 180

Query: 259 EGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTK 318
           EGG+RELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTK
Sbjct: 181 EGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK 240

Query: 319 DFKALFSQITTRF 331
           DFKALFSQ+T+RF
Sbjct: 241 DFKALFSQVTSRF 253

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  181 bits (461), Expect = 5e-56
 Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 29/244 (11%)

Query: 70  SKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--GGA 127
             +   + L      VLV GA G+  + +  +LK +   +    +VR EE   ++   GA
Sbjct: 9   HHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKG--HEPVAMVRNEEQGPELRERGA 66

Query: 128 DDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVD 187
            D+ + ++ +      A   IDA++    + P    D                     +D
Sbjct: 67  SDIVVANLEED--FSHAFASIDAVVFAAGSGPHTGAD-----------------KTILID 107

Query: 188 WIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPY 247
             G    I  A+  G K+ ++V S+G  + +    ++ +   LV KR A+  L  S + Y
Sbjct: 108 LWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRH--YLVAKRLADDELKRSSLDY 165

Query: 248 TIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLA 307
           TI+R G L ++E   +  +     E+ +    +I R DVA+V  + +  +    K F++ 
Sbjct: 166 TIVRPGPLSNEESTGKVTVSPHFSEITR----SITRHDVAKVIAELVDQQHTIGKTFEVL 221

Query: 308 SKPE 311
           +   
Sbjct: 222 NGDT 225

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  157 bits (399), Expect = 4e-47
 Identities = 40/244 (16%), Positives = 87/244 (35%), Gaps = 36/244 (14%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           + + G+ GR G+ + K L      Y      R  E   +      +          +   
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQ 60

Query: 145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK 204
           + G+DA+I ++ +  K                        +VD  G    + AA+ A  K
Sbjct: 61  LHGMDAIINVSGSGGKS---------------------LLKVDLYGAVKLMQAAEKAEVK 99

Query: 205 QIVLVGSMGGTNLNHPLNSLGN--GNILVWKRKAEQYLA-DSGIPYTIIRAGGLQDKEGG 261
           + +L+ ++        + +  +   +  + K  A+ YL  ++ + YTII+ G L ++E  
Sbjct: 100 RFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEA- 158

Query: 262 IRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFK 321
                 G  D +    + +    DVA+   + +  + +  K   + +         +  +
Sbjct: 159 -----TGLID-INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKT---AIKEALE 209

Query: 322 ALFS 325
           +L  
Sbjct: 210 SLLE 213

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  151 bits (384), Expect = 6e-45
 Identities = 39/221 (17%), Positives = 74/221 (33%), Gaps = 28/221 (12%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDS 138
           MA   + + GA G+TG     +  +    Y    LVR        G     + +GD+  +
Sbjct: 1   MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58

Query: 139 NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA 198
             +   + G DA+I+L      + P                      V   G +N + A 
Sbjct: 59  ADVDKTVAGQDAVIVLLGTRNDLSP--------------------TTVMSEGARNIVAAM 98

Query: 199 KAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDK 258
           KA G  ++V   S      +          +     +  + L +SG+ Y  +    + D+
Sbjct: 99  KAHGVDKVVACTSAF-LLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQ 157

Query: 259 EGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEA 299
                  +           +R I++ D+    ++ L  +E 
Sbjct: 158 PLTGAYTVTLDGR----GPSRVISKHDLGHFMLRCLTTDEY 194

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score =  127 bits (320), Expect = 3e-35
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 37/237 (15%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDSNSII 142
            VL+ GAGG+  + V  +L ++          R      K    +  + +GD+ +  ++ 
Sbjct: 25  NVLILGAGGQIARHVINQLADKQT-IKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALK 83

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A+QG D +    +       D D                          + I A KA  
Sbjct: 84  QAMQGQDIVYANLTG-----EDLDI----------------------QANSVIAAMKACD 116

Query: 203 AKQIVLVGSMGGTN----LNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDK 258
            K+++ V S+G  +         N+   G  L   R+A   +  SG+ YTI+R   L D+
Sbjct: 117 VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDE 176

Query: 259 EGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGT 315
           +    EL    +      +   ++R  VA +    +   E         ++P   G 
Sbjct: 177 DIIDYELTSRNEP----FKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDGD 229

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score =  107 bits (269), Expect = 5e-28
 Identities = 25/229 (10%), Positives = 63/229 (27%), Gaps = 44/229 (19%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD----DLFIGDI 135
                + + GA G+  Q +   L   +         R  +++      D     +  G  
Sbjct: 5   YXY--ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQLKTRIPPEIIDHERVTVIEGSF 61

Query: 136 RDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI 195
           ++   +  A+   + + +                                       + +
Sbjct: 62  QNPGXLEQAVTNAEVVFV--------------GAMESGS---------------DMASIV 92

Query: 196 DAAKAAGAKQIVLVGSMGGTNLNHPLNSLGN-----GNILVWKRKAEQYLADSGIPYTII 250
            A      ++++ V   G +                 + +  +R+A   L +S + YTI+
Sbjct: 93  KALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTIL 152

Query: 251 RAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEA 299
           R   L +        L+ +  +        ++R  V +     L   + 
Sbjct: 153 RLTWLYNDPEXTDYELIPEGAQF---NDAQVSREAVVKAIFDILHAADE 198

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 98.2 bits (245), Expect = 2e-24
 Identities = 38/239 (15%), Positives = 74/239 (30%), Gaps = 32/239 (13%)

Query: 80  MAK-STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDS 138
           M K   +++ GA G  G  +  +   R   +    +VR  E  +       +   D+   
Sbjct: 1   MEKVKKIVLIGASGFVGSALLNEALNRG--FEVTAVVRHPEKIKIENEHLKVKKADVSSL 58

Query: 139 NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA 198
           + +    +G DA+I   +                P+ Y                  ID  
Sbjct: 59  DEVCEVCKGADAVISAFNPGW-----------NNPDIY--------DETIKVYLTIIDGV 99

Query: 199 KAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVW---------KRKAEQYLADSGIPYTI 249
           K AG  + ++VG  G   +   L  + +G +            +      + +  I +  
Sbjct: 100 KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVF 159

Query: 250 IRAGGLQDKEGGIRELLVGKDDELLQTETRT-IARADVAEVCIQALQFEEAKFKAFDLA 307
                            +GKDD ++     + I+  D A   I  L+  +   + F + 
Sbjct: 160 FSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIG 218

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 94.3 bits (235), Expect = 1e-22
 Identities = 40/229 (17%), Positives = 70/229 (30%), Gaps = 36/229 (15%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDSNSII 142
           ++ VTGA G+ G +V + L ++        +VR  E    +     ++  GD     S+ 
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQ 61

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A  G+  L+ ++                                     N + AA+ AG
Sbjct: 62  KAFAGVSKLLFISGP--------HYDNTLLIV---------------QHANVVKAARDAG 98

Query: 203 AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGI 262
            K I   G         PL               E  +  + IPYT +R     D     
Sbjct: 99  VKHIAYTGYAFAEESIIPL--------AHVHLATEYAIRTTNIPYTFLRNALYTDFFVNE 150

Query: 263 RELLVGKDDELLQT--ETRT--IARADVAEVCIQALQFEEAKFKAFDLA 307
                 +   ++          + R ++A      L  E  + K ++L 
Sbjct: 151 GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLV 199

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 88.5 bits (220), Expect = 2e-20
 Identities = 41/228 (17%), Positives = 79/228 (34%), Gaps = 35/228 (15%)

Query: 84  TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDSNSII 142
            +++TGA G  G  +  +             VR  E           +   D  +  S++
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMV 60

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
            A +G+D ++ + S +                          +V     +N + AAK +G
Sbjct: 61  EAFKGMDTVVFIPSIIH------------------PSFKRIPEV-----ENLVYAAKQSG 97

Query: 203 AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGG-LQDKEGG 261
              I+ +G     + N          +  +   A + L+ SGI YT +R    +   +  
Sbjct: 98  VAHIIFIGYYADQHNNPFH-------MSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPY 150

Query: 262 IRELLVGKDDELLQTETRT--IARADVAEVCIQALQFEEAKFKAFDLA 307
           + EL+          + R   I R D+A   I  ++  +   K + L+
Sbjct: 151 LPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS 198

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 87.1 bits (216), Expect = 7e-20
 Identities = 53/269 (19%), Positives = 95/269 (35%), Gaps = 58/269 (21%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ----KIGGADDLFIGDI 135
           + K  V+V G  G  G  V + L E    +  R + R    K     ++ GA+ +  GD 
Sbjct: 3   VDKKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAAKELRLQGAE-VVQGDQ 60

Query: 136 RDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI 195
            D   +  A+ G  A  I+T+                   Y+E  +  ++V     K   
Sbjct: 61  DDQVIMELALNGAYATFIVTN-------------------YWESCSQEQEVKQ--GKLLA 99

Query: 196 DAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVW----KRKAEQYLADSGIPYTIIR 251
           D A+  G   +V  G      L         G +       K + E+Y  D G+P T +R
Sbjct: 100 DLARRLGLHYVVYSGLENIKKL-------TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVR 152

Query: 252 AG-----------GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ-FEEA 299
                          +  +G    L +   D  +      ++ +D+  V +  L+  E+ 
Sbjct: 153 LPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMD----GMSVSDLGPVVLSLLKMPEKY 208

Query: 300 KFKAFDLASKPEGTGTPTKDFKALFSQIT 328
             +   L++    T     ++ AL ++ T
Sbjct: 209 VGQNIGLST-CRHTAE---EYAALLTKHT 233

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 84.6 bits (210), Expect = 4e-19
 Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 39/228 (17%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDSNSIIP 143
           + +TGA G+ G  V + L +         +VR     Q +      +   D  D  ++  
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTS 61

Query: 144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA 203
           A+QG++ L++++S+                    E G    Q      +N I+AAKAAG 
Sbjct: 62  ALQGVEKLLLISSS--------------------EVGQRAPQH-----RNVINAAKAAGV 96

Query: 204 KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIR 263
           K I     +        L             + E+ LADSGI YT++R G   +      
Sbjct: 97  KFIAYTSLLHADTSPLGL--------ADEHIETEKMLADSGIVYTLLRNGWYSENYLASA 148

Query: 264 ELLVGKDDELLQT--ETRT--IARADVAEVCIQALQFEEAKFKAFDLA 307
              + +    +    + +     RAD A    + +     + K ++LA
Sbjct: 149 PAAL-EHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELA 195

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 82.7 bits (204), Expect = 9e-19
 Identities = 31/241 (12%), Positives = 69/241 (28%), Gaps = 38/241 (15%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           + + GA GR G  + ++ K R   +    +VR      +     ++   DI D       
Sbjct: 3   IGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTHKDINILQKDIFDLTLS--D 58

Query: 145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK 204
           +   + ++      P              E +                + I       + 
Sbjct: 59  LSDQNVVVDAYGISP-----------DEAEKHVT-----------SLDHLISVLNGTVSP 96

Query: 205 QIVLVGSMGGTNLNH-----------PLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG 253
           ++++VG      ++                         K+        +   +T I   
Sbjct: 97  RLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPS 156

Query: 254 GLQDKEGGIRELLVGKDDELLQTE-TRTIARADVAEVCIQALQFEEAKFKAFDLASKPEG 312
            + +      +  +GKD  L  ++    I+  D A   +  ++      + F +A K E 
Sbjct: 157 AMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEH 216

Query: 313 T 313
            
Sbjct: 217 H 217

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 83.1 bits (205), Expect = 2e-18
 Identities = 40/246 (16%), Positives = 71/246 (28%), Gaps = 45/246 (18%)

Query: 80  MA-KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-----ESKQKIGGADD---- 129
           M  KS VL+ G  G  G+ +          +    L R E     +  Q +         
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLGAK 58

Query: 130 LFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWI 189
           L    + D   ++ A++ +D +I   SA+                              +
Sbjct: 59  LIEASLDDHQRLVDALKQVDVVI---SAL---------------------AGGVLSHHIL 94

Query: 190 GQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTI 249
            Q   ++A K AG  +  L    G                 + KRK  + +  + IPYT 
Sbjct: 95  EQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTY 154

Query: 250 IRAGGLQDKEGGIRELLVGKDDELLQT-------ETR--TIARADVAEVCIQALQFEEAK 300
           + +        G    L G                 +   +   DV    I+++   +  
Sbjct: 155 VSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL 214

Query: 301 FKAFDL 306
            K   +
Sbjct: 215 NKTMYI 220

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 80.7 bits (199), Expect = 2e-17
 Identities = 48/273 (17%), Positives = 89/273 (32%), Gaps = 63/273 (23%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-----------KIGGAD 128
            ++S +L+ GA G  G+ V K   +    +    LVR   +             K  GA+
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGAN 59

Query: 129 DLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
            +  G I D  S++ A++ +D +I   S V                           +  
Sbjct: 60  -IVHGSIDDHASLVEAVKNVDVVI---STVG-------------------------SLQI 90

Query: 189 IGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYT 248
             Q N I A K  G  +     S  G ++++        ++   K K  + +   GIPYT
Sbjct: 91  ESQVNIIKAIKEVGTVKRFF-PSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYT 149

Query: 249 IIRAG-------------GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQ 295
            + +              GL       + +++G  +         +   D+    I+A+ 
Sbjct: 150 YVSSNCFAGYFLRSLAQAGLTAPPRD-KVVILGDGN----ARVVFVKEEDIGTFTIKAVD 204

Query: 296 FEEAKFKAFDLASKPEGTGTPTKDFKALFSQIT 328
                 K   L  +         +  AL+ +  
Sbjct: 205 DPRTLNKTLYL--RLPANTLSLNELVALWEKKI 235

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 76.6 bits (188), Expect = 1e-16
 Identities = 28/236 (11%), Positives = 65/236 (27%), Gaps = 36/236 (15%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           + V GA GR G  +  + + R   +    +VR  +      GA  +              
Sbjct: 3   IAVLGATGRAGSAIVAEARRRG--HEVLAVVRDPQKAADRLGAT-VATLVKEPLVLTEAD 59

Query: 145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK 204
           +  +DA++   S                       G+    +      + +   + +   
Sbjct: 60  LDSVDAVVDALSVPW--------------------GSGRGYLHLDFATHLVSLLRNSDTL 99

Query: 205 QIVLVGSMGGTNLNHPLNSLGN-----------GNILVWKRKAEQYLADSGIPYTIIRAG 253
            + ++GS            + +              L    + +    ++ + +  I   
Sbjct: 100 AVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPS 159

Query: 254 GLQDKEGGIRELLVGKDDELLQTE-TRTIARADVAEVCIQALQFEEAKFKAFDLAS 308
                 G     + GKD  L+  +    I   ++A   +  L+   A      +  
Sbjct: 160 EAFP-SGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRD 214

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 77.6 bits (191), Expect = 3e-16
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 37/181 (20%)

Query: 79  SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-----QKIGGADDLFIG 133
           +  K T+ V GA GR G  + +        +  R  V + +       Q I     LF G
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVT-LFQG 58

Query: 134 DIRDSNSII-PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQK 192
            + ++  ++    +G     I T++                          +++     K
Sbjct: 59  PLLNNVPLMDTLFEGAHLAFINTTSQ-----------------------AGDEIAI--GK 93

Query: 193 NQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRA 252
           +  DAAK AG  Q  +  SM   +L  P  ++        K   E Y+   G+P T + A
Sbjct: 94  DLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPM---WAPKFTVENYVRQLGLPSTFVYA 150

Query: 253 G 253
           G
Sbjct: 151 G 151

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 71.5 bits (175), Expect = 2e-14
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 42/184 (22%)

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD-----------L 130
           ++ +L+ G  G  G+ +     +      A  LVR   +       ++           L
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYA--LVRKTITAANPETKEELIDNYQSLGVIL 59

Query: 131 FIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG 190
             GDI D  +++ AI+ +D +I    A                           ++    
Sbjct: 60  LEGDINDHETLVKAIKQVDIVI---CAAG-------------------------RLLIED 91

Query: 191 QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTII 250
           Q   I A K AG  +       G     H         +   K    + +   G+PYT +
Sbjct: 92  QVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVR-QVFEEKASIRRVIEAEGVPYTYL 150

Query: 251 RAGG 254
               
Sbjct: 151 CCHA 154

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 71.2 bits (174), Expect = 4e-14
 Identities = 43/268 (16%), Positives = 82/268 (30%), Gaps = 47/268 (17%)

Query: 79  SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQKIGGADDL------- 130
              K  VL+ GA G  GQ V     +         L R    S  K      L       
Sbjct: 7   PSPKGRVLIAGATGFIGQFVATASLDAHRPTYI--LARPGPRSPSKAKIFKALEDKGAII 64

Query: 131 FIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG 190
             G I +  ++   ++  +  I++++   +   D                          
Sbjct: 65  VYGLINEQEAMEKILKEHEIDIVVSTVGGESILD-------------------------- 98

Query: 191 QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTII 250
           Q   + A KA G  +  L  S  G ++N         N+   KR+  Q + +SGIP+T I
Sbjct: 99  QIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYI 157

Query: 251 RAGGLQD---KEGGIRELLVGKDDELL-----QTETRTIARADVAEVCIQALQFEEAKFK 302
               +             ++   D          +   +A  D+ +  ++ +       K
Sbjct: 158 CCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNK 217

Query: 303 AFDLASKPEGTGTPTKDFKALFSQITTR 330
           +     +P        +  +++ +   R
Sbjct: 218 SVHF--RPSCNCLNINELASVWEKKIGR 243

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 69.9 bits (171), Expect = 1e-13
 Identities = 38/236 (16%), Positives = 73/236 (30%), Gaps = 45/236 (19%)

Query: 79  SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-----DLFIG 133
           +  KS +L+ G  G  G  + K   +    +      R   SK  +          +  G
Sbjct: 8   NGMKSKILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNSSKTTLLDEFQSLGAIIVKG 65

Query: 134 DIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN 193
           ++ +   ++  ++ +D +I   SA+   +                            Q  
Sbjct: 66  ELDEHEKLVELMKKVDVVI---SALAFPQIL-------------------------DQFK 97

Query: 194 QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAG 253
            ++A K AG  +  L    G    +          ++  KR   + + ++ IPYT + A 
Sbjct: 98  ILEAIKVAGNIKRFLPSDFG-VEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSAN 156

Query: 254 GLQDKEGGIRELLVGKDDELLQT-----ETR--TIARADVAEVCIQALQFEEAKFK 302
                   I  LL   D +   T     E +       D+    I+      A  +
Sbjct: 157 CFAS--YFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNR 210

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 28/187 (14%), Positives = 54/187 (28%), Gaps = 32/187 (17%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDS 138
            A     V GA G  G    + ++     +    + R     Q++   + +  + ++ D 
Sbjct: 11  GAHVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDH 68

Query: 139 NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA 198
             +  A++G+D +I      P     +        E                      A 
Sbjct: 69  AGLERALRGLDGVIFSAGYYPSRPRRWQ-------EEV--------ASALGQTNPFYAAC 113

Query: 199 KAAGAKQIVLVGSMG-------GTNLNHPLNSLGNGNILVW----KRKAEQY---LADSG 244
             A   +I+ VGS         G   +  L      +        K   ++     A +G
Sbjct: 114 LQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNG 173

Query: 245 IPYTIIR 251
           +P  I  
Sbjct: 174 LPVVIGI 180

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 63.4 bits (154), Expect = 1e-11
 Identities = 35/273 (12%), Positives = 79/273 (28%), Gaps = 57/273 (20%)

Query: 79  SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-----TEESKQKIGGAD----- 128
                 +++ G  G  G+ + +     S  +      R     +  S  ++         
Sbjct: 1   GSHMEKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGV 58

Query: 129 DLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
            +  G++ +   ++  ++ +D +I   SA+P                             
Sbjct: 59  TIIEGEMEEHEKMVSVLKQVDIVI---SALPFPMIS------------------------ 91

Query: 189 IGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYT 248
             Q + I+A KAAG  +  L    G    +         ++L  KR   + +  + +PYT
Sbjct: 92  -SQIHIINAIKAAGNIKRFLPSDFG-CEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYT 149

Query: 249 IIRAGGLQDKEGGIRELLVGKDDELLQTETRTI-----------ARADVAEVCIQALQFE 297
            + A             L+       + +   I              D+A+  I+     
Sbjct: 150 YVSANCFGA---YFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDP 206

Query: 298 EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR 330
               +      +P        +  +L+   +  
Sbjct: 207 RCCNRIVIY--RPPKNIISQNELISLWEAKSGL 237

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 38/194 (19%), Positives = 64/194 (32%), Gaps = 33/194 (17%)

Query: 76  KVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-----TEESKQKIGGADDL 130
           +   M   +V + GA G TG+++ K++ E+        + R      EE+ + +    + 
Sbjct: 12  EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV----NQ 67

Query: 131 FIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG 190
            + D    +    A QG D                   K G   F         +VD   
Sbjct: 68  EVVDFEKLDDYASAFQGHDVGFCCLGTTRG--------KAGAEGF--------VRVDRDY 111

Query: 191 QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIP-YTI 249
                + AKA G K   L+ S  G + +           L  K + E  + +     Y++
Sbjct: 112 VLKSAELAKAGGCKHFNLL-SSKGADKSSN------FLYLQVKGEVEAKVEELKFDRYSV 164

Query: 250 IRAGGLQDKEGGIR 263
            R G L       R
Sbjct: 165 FRPGVLLCDRQESR 178

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 36/227 (15%), Positives = 78/227 (34%), Gaps = 39/227 (17%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSN 139
           M+ S +L+ G  G  G  + ++L  +   +   GL R+ +    +       I D+   +
Sbjct: 1   MSLSKILIAGC-GDLGLELARRLTAQ--GHEVTGLRRSAQ---PMPAGVQTLIADVTRPD 54

Query: 140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK 199
           ++   +     +++    V         ++     +     +Y E +     +N + A +
Sbjct: 55  TLASIVHLRPEILVY--CVA-------ASEYSDEHY---RLSYVEGL-----RNTLSALE 97

Query: 200 AAGAKQIVLVGSMG--------GTNLNHPLNSLG-NGNILVWKRKAEQYLADSGIPYTII 250
            A  + +  V S G          + + P  +   +G  ++   +AE  L  +    TI+
Sbjct: 98  GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRML---EAEALL--AAYSSTIL 152

Query: 251 RAGGLQDKEGGIRELLVGKDDELLQTETRT--IARADVAEVCIQALQ 295
           R  G+               ++       T  I R D A      +Q
Sbjct: 153 RFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQ 199

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 27/135 (20%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSN 139
           MA   +LVTGA G+ G+++ ++L   +E    R            G  ++    D+ D+N
Sbjct: 1   MAMKRLLVTGAAGQLGRVMRERLAPMAEIL--RLADL--SPLDPAGPNEECVQCDLADAN 56

Query: 140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFE---EGAYPEQVDWIGQKNQID 196
           ++   + G D ++ L   +   KP          E   +    G Y          N  +
Sbjct: 57  AVNAMVAGCDGIVHL-GGISVEKP---------FEQILQGNIIGLY----------NLYE 96

Query: 197 AAKAAGAKQIVLVGS 211
           AA+A G  +IV   S
Sbjct: 97  AARAHGQPRIVFASS 111

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 32/231 (13%)

Query: 79  SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDS 138
                 VL+ GA G TG+ +  ++             R   ++             +   
Sbjct: 2   HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------HPRLDNPVGPL 55

Query: 139 NSIIPAIQ-GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA 197
             ++P +   ID          K         G    F          VD+         
Sbjct: 56  AELLPQLDGSIDTAFCCLGTTIK-------EAGSEEAFR--------AVDFDLPLAVGKR 100

Query: 198 AKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIP-YTIIRAGGL- 255
           A   GA+  ++V ++G        ++  +      K + EQ L + G P  TI R   L 
Sbjct: 101 ALEMGARHYLVVSALGA-------DAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLF 153

Query: 256 -QDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFD 305
              +E  + E+L      +L  +   I   D+A    +    E    +  +
Sbjct: 154 GPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVE 204

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 32/148 (21%), Positives = 52/148 (35%), Gaps = 35/148 (23%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG------GADDL--F 131
           + K T  V G  G    ++ K L ++   YA    VR  ++++K+          DL  F
Sbjct: 7   IGKKTACVVGGTGFVASLLVKLLLQKG--YAVNTTVRDPDNQKKVSHLLELQELGDLKIF 64

Query: 132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPD-----FDPAKGGRPEFYFEEGAYPEQV 186
             D+ D  S    I G D +  + + V     D       PA                 +
Sbjct: 65  RADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPA-----------------I 107

Query: 187 DWIGQKNQIDAA-KAAGAKQIVLVGSMG 213
              G  N + A  +A   K+++L  S  
Sbjct: 108 Q--GVVNVMKACTRAKSVKRVILTSSAA 133

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 28/153 (18%)

Query: 80  MA--KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG------GADD-- 129
           M     TV VTGA G  G  +  +L ER   Y  R  VR   + +K+        A+   
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERG--YTVRATVRDPTNVKKVKHLLDLPKAETHL 58

Query: 130 -LFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
            L+  D+ D  S   AI+G   +  + + +     D        PE    +      ++ 
Sbjct: 59  TLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKD--------PENEVIKPT----IE- 105

Query: 189 IGQKNQIDAAKAAGA-KQIVLVGSMGGTNLNHP 220
            G    + +  AA   +++V   S G  N+   
Sbjct: 106 -GMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEH 137

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 37/155 (23%)

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADD---LF 131
           K  V VTG  G  G  + K L E    Y+    +R +  +++         GA +    F
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENG--YSVNTTIRADPERKRDVSFLTNLPGASEKLHFF 58

Query: 132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPD-----FDPAKGGRPEFYFEEGAYPEQV 186
             D+ + +S   AI+G   +    S +     +                          V
Sbjct: 59  NADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRT-----------------V 101

Query: 187 DWIGQKNQIDAAKAAGA-KQIVLVGSMGGTNLNHP 220
           D  G    + A   +   K+ +   S    + N  
Sbjct: 102 D--GALGILKACVNSKTVKRFIYTSSGSAVSFNGK 134

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 46.2 bits (110), Expect = 6e-06
 Identities = 34/183 (18%), Positives = 58/183 (31%), Gaps = 33/183 (18%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSN 139
           M    +LVTGA G  G  +   L   +  +  R               +++   D+ D+ 
Sbjct: 1   MLN-RLLVTGAAGGVGSAIRPHLGTLA--HEVRLSDI--VDLGAAEAHEEIVACDLADAQ 55

Query: 140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK 199
           ++   ++  D +I L   V   +P  D                  Q + IG  N  +AA+
Sbjct: 56  AVHDLVKDCDGIIHL-GGVSVERPWNDIL----------------QANIIGAYNLYEAAR 98

Query: 200 AAGAKQIVLVGS---MGGTNLNHPLNSLGNGNIL----VWKRKAEQYL---ADS-GIPYT 248
             G  +IV   S   +G       +++           + K   E           I   
Sbjct: 99  NLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETL 158

Query: 249 IIR 251
            IR
Sbjct: 159 NIR 161

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 32/153 (20%), Positives = 47/153 (30%), Gaps = 36/153 (23%)

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG------GADDL---FI 132
            S VLVTGA G     V ++L E    Y  RG  R+      +                +
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHG--YKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68

Query: 133 GDIRDSNSIIPAIQGIDALIILTSAVPKMKPD----FDPAKGGRPEFYFEEGAYPEQVDW 188
            D+    +    I+G   +  + S V            PA                 +  
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVS-FSNKYDEVVTPA-----------------IG- 109

Query: 189 IGQKNQIDAAKAAGA-KQIVLVGSMGGTNLNHP 220
            G  N + AA A  + K+ VL  S     +  P
Sbjct: 110 -GTLNALRAAAATPSVKRFVLTSSTVSALIPKP 141

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 43.0 bits (102), Expect = 8e-05
 Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 46/166 (27%)

Query: 76  KVLSMAK-STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDL---- 130
              +M    T+L+TG  G  G+   +K+ + +         R +E KQ      ++    
Sbjct: 14  NHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR-DELKQ-----SEMAMEF 67

Query: 131 -------FIGDIRDSNSIIPAIQGIDALIILTSA---VPKMKPDFDPAKGGRPEFYFEEG 180
                  FIGD+RD   +  A++G+D + I  +A   VP              E+   E 
Sbjct: 68  NDPRMRFFIGDVRDLERLNYALEGVD-ICIHAAALKHVPIA------------EYNPLEC 114

Query: 181 AYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS---------MGGTNL 217
               + + +G  N I+A       Q++ + +          G T L
Sbjct: 115 I---KTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKL 157

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 38/217 (17%), Positives = 68/217 (31%), Gaps = 36/217 (16%)

Query: 55  SLTSLPRTRYRRSCVSKTEAVKVLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL 114
           ++ +   T Y      + E  +        + +TGAGG     + ++LK   E +     
Sbjct: 2   AMGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKH--EGHYVIAS 59

Query: 115 -VRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRP 173
             +  E   +    D+  + D+R   + +   +G+D +  L +             G   
Sbjct: 60  DWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA----------DMGG--M 107

Query: 174 EFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS--MGGTNLNHPLN--SLGNGNI 229
            F     +     + +   N I+AA+  G K+     S  +            SL   + 
Sbjct: 108 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESD- 166

Query: 230 LVW-----------KRKAE----QYLADSGIPYTIIR 251
             W           K   E     Y  D GI   I R
Sbjct: 167 -AWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGR 202

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 31/222 (13%), Positives = 60/222 (27%), Gaps = 71/222 (31%)

Query: 18  SIGHSRNKCRQVASSIPFLNSL-----PEFSSHAFHARSSPSSLTS--------LPRTRY 64
           ++      C    + +  L  L     P ++S + H+ +    + S        L    Y
Sbjct: 188 NLK----NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 65  RRSC-----VSKTEAVKVLSMAKSTVLV-TGAGGRTGQIVYKKLKERSEQYAARGLVRTE 118
                    V   +A    ++    +L+ T     T  +        S  + +  L   E
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNL-SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 119 ESKQKIGGADDLF-------IGDI-RDSNSIIP-AIQGIDALI----------------- 152
                      L          D+ R+  +  P  +  I   I                 
Sbjct: 303 --------VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354

Query: 153 ---ILTSAVPKMKPDFDPAKGGRPEFY----FEEGAY-PEQV 186
              I+ S++  ++P        R  F     F   A+ P  +
Sbjct: 355 LTTIIESSLNVLEPAEY-----RKMFDRLSVFPPSAHIPTIL 391

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 41/283 (14%), Positives = 74/283 (26%), Gaps = 116/283 (40%)

Query: 102 LKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSN-----------SIIPAIQG--- 147
           +  +        L  T  SKQ+       F+ ++   N              P++     
Sbjct: 55  IMSKDAVSGTLRLFWTLLSKQE--EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY 112

Query: 148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA--KAAGAKQ 205
           I+    L +               R +                   ++  A  +   AK 
Sbjct: 113 IEQRDRLYNDNQVFAKYNVS----RLQ----------------PYLKLRQALLELRPAKN 152

Query: 206 IVLVGSMGG---TNL------NHPLNSLGNGNILVW-----KRKAEQYLA---------- 241
           +++ G + G   T +      ++ +    +  I  W         E  L           
Sbjct: 153 VLIDG-VLGSGKTWVALDVCLSYKVQCKMDFKIF-WLNLKNCNSPETVLEMLQKLLYQID 210

Query: 242 ---------DSGIPYTIIRAGGLQDKEGGIRELLVGKD--DELLQTETRTIARADV--AE 288
                     S I   I         +  +R LL  K   + LL      +   +V  A+
Sbjct: 211 PNWTSRSDHSSNIKLRI------HSIQAELRRLLKSKPYENCLL------VLL-NVQNAK 257

Query: 289 VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTRF 331
                       + AF+L+             K L   +TTRF
Sbjct: 258 A-----------WNAFNLSC------------KIL---LTTRF 274

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 39.7 bits (92), Expect = 8e-04
 Identities = 11/87 (12%), Positives = 22/87 (25%), Gaps = 3/87 (3%)

Query: 83  STVLVTGAGGRTGQIVYKKLKERSEQYAA---RGLVRTEESKQKIGGADDLFIGDIRDSN 139
           S  L+ G  G  G  + + L             G+ R            +    DI D +
Sbjct: 2   SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPD 61

Query: 140 SIIPAIQGIDALIILTSAVPKMKPDFD 166
                +  +  +  +       +    
Sbjct: 62  DSQAKLSPLTDVTHVFYVTWANRSTEQ 88

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	331
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.98
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.98
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.98
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.98
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.98
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.98
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.98
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.97
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.97
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.97
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.97
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.97
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.97
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.97
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.97
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.97
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.96
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.96
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.96
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.96
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.96
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.96
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.96
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.96
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.96
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.96
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.95
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.94
1spx_A	278	Short-chain reductase family member (5L265); paral	99.93
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.93
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.93
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.92
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.92
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.92
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.92
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.92
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.92
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.92
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.92
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.91
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.91
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.91
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.91
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.91
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.91
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.91
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.91
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.91
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.91
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.91
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.91
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.91
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.91
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.91
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.91
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.91
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.91
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.91
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.91
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.91
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.91
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.9
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.9
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.9
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.9
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.9
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.9
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.9
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.9
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.9
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.9
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.9
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.9
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.9
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.9
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.9
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.9
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.9
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.9
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.9
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.9
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.9
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.9
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.9
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.9
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.9
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.9
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.9
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.9
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.9
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.9
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.9
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.9
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.9
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.9
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.9
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.9
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.9
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.9
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.9
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.9
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.9
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.9
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.89
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.89
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.89
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.89
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.89
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.89
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.89
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.89
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.89
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.89
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.89
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.89
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.89
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.89
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.89
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.89
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.89
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.89
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.89
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.89
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.89
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.89
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.89
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.89
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.89
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.89
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.89
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.89
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.89
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.89
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.89
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.89
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.88
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.88
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.88
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.88
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.88
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.88
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.88
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.88
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.88
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.88
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.88
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.88
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.88
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.88
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.88
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.88
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.88
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.88
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.88
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.88
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.88
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.88
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.88
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.88
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.88
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.88
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.88
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.88
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.88
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.87
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.87
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.87
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.87
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.87
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.87
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.87
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.87
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.87
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.87
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.87
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.87
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.87
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.87
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.87
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.87
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.87
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.87
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.87
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.87
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.87
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.86
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.86
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.86
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.86
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.86
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.86
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.86
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.86
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.86
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.86
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.86
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.86
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.86
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.85
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.85
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.85
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.85
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.85
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.85
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.85
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.84
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.84
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.84
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.84
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.84
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.84
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.84
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.83
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.83
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.83
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.82
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.82
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.82
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.82
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.81
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.81
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.8
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.79
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.79
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.79
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.76
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.74
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.72
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.7
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.7
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.69
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.69
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.66
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.63
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.61
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.57
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.56
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.54
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.5
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.49
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.49
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.46
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.37
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.26
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.16
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.07
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.01
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.99
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.98
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.94
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.94
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.86
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.85
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.84
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.81
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.78
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.72
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.71
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.69
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.63
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.52
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.49
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.47
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.47
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.47
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.43
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.39
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.35
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.3
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.29
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.2
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.05
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.03
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.03
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.01
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.01
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.01
1lnq_A	336	MTHK channels, potassium channel related protein;	97.98
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.97
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.91
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.9
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.86
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.86
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.85
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.83
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.82
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.8
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.79
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.79
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.78
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.77
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.76
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.75
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.74
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.72
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.72
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.71
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.69
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.68
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.67
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.67
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.66
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.63
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.63
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.61
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.61
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.61
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.6
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.6
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.59
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.58
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.57
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.56
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.56
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.55
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.55
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.54
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.54
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.54
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.53
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.52
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.52
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.52
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.49
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.48
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.46
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.46
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.46
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.45
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.42
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.41
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.4
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.39
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.39
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.36
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.36
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.32
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.32
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.32
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.3
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.3
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.29
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.27
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.25
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.24
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	97.23
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	97.21
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.19
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.19
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.19
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.18
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.18
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.17
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.17
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.16
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.15
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	97.15
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.14
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.14
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.13
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.12
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.12
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.11
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.1
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.09
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	97.09
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.08
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.08
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.07
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	97.07
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.07
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.07
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.06
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	97.05
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.05
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.04
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.03
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.03
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.02
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.02
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.02
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.02
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.02
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.02
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.01
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.01
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.01
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.01
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.99
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.99
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.98
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.98
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.98
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.97
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.97
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.97
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.97
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	96.96
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.96
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.95
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.95
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.95
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.95
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.94
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.94
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.93
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.92
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.92
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.92
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.92
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.91
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.91
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.91
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.9
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.9
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.89
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.89
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.89
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.88
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.88
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.88
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.87
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.86
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.86
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.86
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.85
2duw_A	145	Putative COA-binding protein; ligand binding prote	96.85
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.85

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=1.4e-37  Score=272.15  Aligned_cols=252  Identities=80%  Similarity=1.233  Sum_probs=204.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      +++++||||||+|+||++++++|+++++|++|++++|++++...+..++.++.+|++|++++.++++++|+|||+||...
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~   81 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVP   81 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence            34688999999999999999999998546999999999877766666789999999999999999999999999999754


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQY  239 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~  239 (331)
                      .....+.+....+++..++......++|+.++.+++++|++.++++||++||.++..+..|..++..+.|..+|..+|.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~  161 (253)
T 1xq6_A           82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY  161 (253)
T ss_dssp             EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHH
Confidence            32111112233456666655566678999999999999999999999999999887776666666656799999999999


Q ss_pred             HHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHH
Q 046297          240 LADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKD  319 (331)
Q Consensus       240 ~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e  319 (331)
                      +++.+++++++||++++|+.......+.+....+++...++++++|+|++++.+++++...+++||+++++.++.+++.|
T Consensus       162 ~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e  241 (253)
T 1xq6_A          162 LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKD  241 (253)
T ss_dssp             HHTSSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCC
T ss_pred             HHhCCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHH
Confidence            99999999999999999987544333333333344445678999999999999999877678899999832224699999


Q ss_pred             HHHHHHHhhccC
Q 046297          320 FKALFSQITTRF  331 (331)
Q Consensus       320 ~~~~~~~~~g~~  331 (331)
                      +++.+++++|+.
T Consensus       242 ~~~~~~~~~g~~  253 (253)
T 1xq6_A          242 FKALFSQVTSRF  253 (253)
T ss_dssp             HHHHHHTCCCCC
T ss_pred             HHHHHHHHhCCC
Confidence            999999999874

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=7.5e-35  Score=267.38  Aligned_cols=234  Identities=19%  Similarity=0.148  Sum_probs=184.4

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh----hcC--------CCCcEEEccCCCcccHHHHhc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ----KIG--------GADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~----~l~--------~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      .+.+|+||||||+||||++|+++|+++  |++|++++|+.....    .+.        .+++++.+|+.|++.+.++++
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence            345789999999999999999999999  999999999764321    111        568999999999999999999


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC---
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL---  221 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~---  221 (331)
                      ++|+|||+||.....      ....+|...       .++|+.++.+++++|++.++++|||+||.+++....  +.   
T Consensus       100 ~~d~Vih~A~~~~~~------~~~~~~~~~-------~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~  166 (351)
T 3ruf_A          100 GVDHVLHQAALGSVP------RSIVDPITT-------NATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEE  166 (351)
T ss_dssp             TCSEEEECCCCCCHH------HHHHCHHHH-------HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             CCCEEEECCccCCcc------hhhhCHHHH-------HHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccC
Confidence            999999999963221      111223333       388999999999999999999999999987643221  11   


Q ss_pred             -CCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc------------hhhhhccCCccccC---Cccccc
Q 046297          222 -NSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG------------IRELLVGKDDELLQ---TETRTI  281 (331)
Q Consensus       222 -~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~------------~~~~~~~~~~~~~~---~~~~~i  281 (331)
                       ...+.+.|+.+|..+|++++    +.+++++++||+++||+...            ......+....+++   ..++++
T Consensus       167 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  246 (351)
T 3ruf_A          167 NIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFC  246 (351)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeE
Confidence             11223679999999998876    46999999999999998642            12334455544443   347899


Q ss_pred             CHHHHHHHHHHHhcC-cccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          282 ARADVAEVCIQALQF-EEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~-~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++|+|++++.++.. +...+++||+++   ++.+|+.|+++.+.+++|+
T Consensus       247 ~v~Dva~a~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          247 YIDNVIQMNILSALAKDSAKDNIYNVAV---GDRTTLNELSGYIYDELNL  293 (351)
T ss_dssp             EHHHHHHHHHHHHTCCGGGCSEEEEESC---SCCEEHHHHHHHHHHHHHT
T ss_pred             EHHHHHHHHHHHHhhccccCCCEEEeCC---CCcccHHHHHHHHHHHhCc
Confidence            999999999999987 456788999999   8999999999999999885

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=7.3e-34  Score=256.66  Aligned_cols=221  Identities=19%  Similarity=0.160  Sum_probs=180.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      +|+||||||+||||++|++.|+++  |++|++++|++.... +. +++++.+|+. ++.+.++++++|+|||+|+.....
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~-~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~   76 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-IN-DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ   76 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC-------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-CC-ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence            478999999999999999999999  999999999954444 43 6999999999 999999999999999999964321


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCCCCcchHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNSLGNGNILVWK  233 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~~~~~~y~~sK  233 (331)
                                +++..+       ++|+.++.+++++|++.++++|||+||.+++..        ..+..  +.+.|+.+|
T Consensus        77 ----------~~~~~~-------~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~--p~~~Y~~sK  137 (311)
T 3m2p_A           77 ----------GKISEF-------HDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPL--PDLMYGVSK  137 (311)
T ss_dssp             ----------SCGGGT-------HHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCC--CSSHHHHHH
T ss_pred             ----------ChHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCC--CCchhHHHH
Confidence                      344444       889999999999999999999999999866432        22222  236799999


Q ss_pred             HHHHHHHHh----cCCCEEEEecCcccCCCcc--------hhhhhccCCcccc---CCcccccCHHHHHHHHHHHhcCcc
Q 046297          234 RKAEQYLAD----SGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELL---QTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       234 ~~~e~~~~~----~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      ..+|+++++    .+++++++||+++||+...        ......+....++   +..++++|++|+|++++.+++++.
T Consensus       138 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~  217 (311)
T 3m2p_A          138 LACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK  217 (311)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC
Confidence            999998875    7999999999999998754        1223345555553   344789999999999999999876


Q ss_pred             cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          299 AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       299 ~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                       .+++||+++   ++.+|+.|+++.+.+.+|+
T Consensus       218 -~~~~~~i~~---~~~~s~~e~~~~i~~~~g~  245 (311)
T 3m2p_A          218 -VSGTFNIGS---GDALTNYEVANTINNAFGN  245 (311)
T ss_dssp             -CCEEEEECC---SCEECHHHHHHHHHHHTTC
T ss_pred             -CCCeEEeCC---CCcccHHHHHHHHHHHhCC
Confidence             678999999   8999999999999999875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.1e-34  Score=247.33  Aligned_cols=214  Identities=17%  Similarity=0.185  Sum_probs=171.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      +|+||||||+|+||++++++|+++  |++|++++|++++...+..+++++.+|+.|++++.++++++|+|||+||.... 
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~-   80 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWN-   80 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCC-
Confidence            478999999999999999999999  99999999998887767677999999999999999999999999999985311 


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC-----CCCCCCcchHHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH-----PLNSLGNGNILVWKRKA  236 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~-----~~~~~~~~~y~~sK~~~  236 (331)
                                ++        ...++|+.++.+++++|++.++++||++||.+++....     .....+.+.|+.+|..+
T Consensus        81 ----------~~--------~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~  142 (227)
T 3dhn_A           81 ----------NP--------DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALG  142 (227)
T ss_dssp             ---------------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHH
T ss_pred             ----------Ch--------hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHH
Confidence                      11        13488999999999999999999999999987533211     11122346799999999


Q ss_pred             HHHHH----hcCCCEEEEecCcccCCCcchhhhhccCCccc-cCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCC
Q 046297          237 EQYLA----DSGIPYTIIRAGGLQDKEGGIRELLVGKDDEL-LQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPE  311 (331)
Q Consensus       237 e~~~~----~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~  311 (331)
                      |.+++    +.+++++++||+++||+.........+....+ .+.+++++|++|+|++++.+++++...|++|++++   
T Consensus       143 e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~---  219 (227)
T 3dhn_A          143 EFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGY---  219 (227)
T ss_dssp             HHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEEC---
T ss_pred             HHHHHHHhhccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEe---
Confidence            96654    46899999999999998765333333333333 34458899999999999999999998999999999   


Q ss_pred             CCCCCHHH
Q 046297          312 GTGTPTKD  319 (331)
Q Consensus       312 ~~~~t~~e  319 (331)
                      +++.++++
T Consensus       220 ~~~~~~~~  227 (227)
T 3dhn_A          220 LEHHHHHH  227 (227)
T ss_dssp             CSCCC---
T ss_pred             ehhcccCC
Confidence            78877753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.5e-34  Score=267.59  Aligned_cols=236  Identities=13%  Similarity=0.171  Sum_probs=184.9

Q ss_pred             hccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCC-CcccHHHHhcCCCEEEE
Q 046297           77 VLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIR-DSNSIIPAIQGIDALII  153 (331)
Q Consensus        77 ~~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~-d~~~~~~~l~~~d~Vi~  153 (331)
                      +..+.+|+||||||+||||++|+++|++++ ||+|++++|++++...+.  .+++++.+|++ |.+.+.++++++|+|||
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih   97 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETT-DWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP   97 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHS-SCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCC-CCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence            445667899999999999999999999973 799999999987765542  46899999999 99999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CCCC--------
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PLNS--------  223 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~~~--------  223 (331)
                      +|+.....      ....+|...       .++|+.++.+++++|++.+ ++|||+||.+++....  +...        
T Consensus        98 ~A~~~~~~------~~~~~~~~~-------~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~  163 (372)
T 3slg_A           98 LVAIATPA------TYVKQPLRV-------FELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYG  163 (372)
T ss_dssp             CBCCCCHH------HHHHCHHHH-------HHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEEC
T ss_pred             cCccccHH------HHhhCHHHH-------HHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccC
Confidence            99964321      001223333       3789999999999999999 9999999986543321  1110        


Q ss_pred             ---CCcchHHHHHHHHHHHHHhc---CCCEEEEecCcccCCCcc----------------hhhhhccCCccccC---Ccc
Q 046297          224 ---LGNGNILVWKRKAEQYLADS---GIPYTIIRAGGLQDKEGG----------------IRELLVGKDDELLQ---TET  278 (331)
Q Consensus       224 ---~~~~~y~~sK~~~e~~~~~~---~~~~~ilrp~~v~g~~~~----------------~~~~~~~~~~~~~~---~~~  278 (331)
                         .+.+.|+.+|..+|++++.+   +++++++||+++||+...                ......+....+++   ..+
T Consensus       164 p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  243 (372)
T 3slg_A          164 PINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKR  243 (372)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEE
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEE
Confidence               12257999999999999866   999999999999998742                12333455555443   447


Q ss_pred             cccCHHHHHHHHHHHhcCcc--cCCceEEeccCCCC-CCCCHHHHHHHHHHhhcc
Q 046297          279 RTIARADVAEVCIQALQFEE--AKFKAFDLASKPEG-TGTPTKDFKALFSQITTR  330 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~-~~~t~~e~~~~~~~~~g~  330 (331)
                      +++|++|+|++++.+++++.  ..+++||+++   + +.+|+.|+++.+.+++|+
T Consensus       244 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~---~~~~~s~~e~~~~i~~~~g~  295 (372)
T 3slg_A          244 AFTYVDDGISALMKIIENSNGVATGKIYNIGN---PNNNFSVRELANKMLELAAE  295 (372)
T ss_dssp             ECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC---TTCEEEHHHHHHHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHHhcccCcCCCceEEeCC---CCCCccHHHHHHHHHHHhCC
Confidence            89999999999999999875  5688999998   6 689999999999999874

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=7.1e-34  Score=260.35  Aligned_cols=232  Identities=12%  Similarity=0.090  Sum_probs=178.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCc--hhhhc-----CCCCcEEEccCCCcccHHHHhcC--C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEE--SKQKI-----GGADDLFIGDIRDSNSIIPAIQG--I  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~--~~~~l-----~~~~~~v~~Dl~d~~~~~~~l~~--~  148 (331)
                      +.+|+||||||+||||++|+++|+++  |  ++|++++|...  ....+     ..+++++.+|+.|++.+.+++++  +
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   99 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQS--YETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDV   99 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHH--CTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhh--CCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence            45789999999999999999999999  7  78888888642  12222     13588999999999999999987  9


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC---CC----
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH---PL----  221 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~---~~----  221 (331)
                      |+|||+|+.....      ....+++..+       ++|+.++.+++++|++.++++|||+||.+++....   +.    
T Consensus       100 d~Vih~A~~~~~~------~~~~~~~~~~-------~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~  166 (346)
T 4egb_A          100 QVIVNFAAESHVD------RSIENPIPFY-------DTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEET  166 (346)
T ss_dssp             CEEEECCCCC---------------CHHH-------HHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTS
T ss_pred             CEEEECCcccchh------hhhhCHHHHH-------HHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCC
Confidence            9999999974321      1223444444       89999999999999999999999999986544321   11    


Q ss_pred             CCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc--------hhhhhccCCccccC---CcccccCHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQ---TETRTIARADV  286 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~---~~~~~i~v~Dv  286 (331)
                      ...+.+.|+.+|..+|++++.    .+++++++||+++||+...        ......+....+++   ..++++|++|+
T Consensus       167 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  246 (346)
T 4egb_A          167 PLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDH  246 (346)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHH
Confidence            112236799999999988874    6999999999999998753        22333455444432   34789999999


Q ss_pred             HHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          287 AEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       287 a~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++++.+++++. .+++||+++   ++.+++.|+++.+.+++|+
T Consensus       247 a~a~~~~~~~~~-~g~~~~i~~---~~~~s~~e~~~~i~~~~g~  286 (346)
T 4egb_A          247 CSAIDVVLHKGR-VGEVYNIGG---NNEKTNVEVVEQIITLLGK  286 (346)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECC---SCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCC-CCCEEEECC---CCceeHHHHHHHHHHHhCC
Confidence            999999998876 678999999   8999999999999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-33  Score=257.96  Aligned_cols=227  Identities=15%  Similarity=0.160  Sum_probs=177.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      +|+||||||+||||++|+++|+++  |++|++++|++.+.+.+.. +++++.+|+.|++.+.++++++|+|||+||....
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   90 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPS   90 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcC
Confidence            468999999999999999999999  9999999998876655543 6889999999999999999999999999996321


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC---------CCCCCCC--cchH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN---------HPLNSLG--NGNI  229 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~---------~~~~~~~--~~~y  229 (331)
                              ...+++..+       ++|+.++.+++++|++.++++||++||.+++...         .+..+..  .+.|
T Consensus        91 --------~~~~~~~~~-------~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y  155 (342)
T 2x4g_A           91 --------RPRRWQEEV-------ASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSY  155 (342)
T ss_dssp             --------------CHH-------HHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHH
T ss_pred             --------CCCCHHHHH-------HHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChH
Confidence                    112333333       8899999999999999999999999998764322         2222210  4679


Q ss_pred             HHHHHHHHHHHHh---cCCCEEEEecCcccCCCc-c--h----hhhhccCCccccCCcccccCHHHHHHHHHHHhcCccc
Q 046297          230 LVWKRKAEQYLAD---SGIPYTIIRAGGLQDKEG-G--I----RELLVGKDDELLQTETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       230 ~~sK~~~e~~~~~---~~~~~~ilrp~~v~g~~~-~--~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                      +.+|+.+|++++.   .+++++++||+++||+.. .  .    .....+....+.+..+++++++|+|++++.+++++..
T Consensus       156 ~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  235 (342)
T 2x4g_A          156 VLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI  235 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCC
Confidence            9999999998875   389999999999999865 2  1    1222333333334557899999999999999987755


Q ss_pred             CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          300 KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       300 ~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                       +++||+++   ++ +|+.|+++.+.+++|+
T Consensus       236 -g~~~~v~~---~~-~s~~e~~~~i~~~~g~  261 (342)
T 2x4g_A          236 -GERYLLTG---HN-LEMADLTRRIAELLGQ  261 (342)
T ss_dssp             -TCEEEECC---EE-EEHHHHHHHHHHHHTC
T ss_pred             -CceEEEcC---Cc-ccHHHHHHHHHHHhCC
Confidence             78999999   88 9999999999999874

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=3.3e-33  Score=239.82  Aligned_cols=206  Identities=20%  Similarity=0.255  Sum_probs=170.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCC-cccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRD-SNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d-~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+||||||+|+||++++++|+++  |++|++++|++++...+ .+++++.+|+.| ++++.++++++|+|||+||.... 
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~-   76 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK-   76 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS-
T ss_pred             CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC-
Confidence            57999999999999999999999  99999999998776555 568999999999 99999999999999999996431 


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCC--CCCCcchHHHHHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL--NSLGNGNILVWKRKAEQY  239 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~--~~~~~~~y~~sK~~~e~~  239 (331)
                                          ...++|+.++.+++++|++.++++||++||.+++.+....  .....+.|+.+|+.+|++
T Consensus        77 --------------------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~  136 (219)
T 3dqp_A           77 --------------------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLY  136 (219)
T ss_dssp             --------------------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHH
T ss_pred             --------------------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHH
Confidence                                1348899999999999999999999999999875432110  001126799999999999


Q ss_pred             H-HhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHH
Q 046297          240 L-ADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTK  318 (331)
Q Consensus       240 ~-~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~  318 (331)
                      + +..+++++++||++++|+.....       ..+....+++++++|+|++++.+++++...+++||+++   + ..++.
T Consensus       137 ~~~~~~i~~~ilrp~~v~g~~~~~~-------~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~---g-~~~~~  205 (219)
T 3dqp_A          137 LTKETNLDYTIIQPGALTEEEATGL-------IDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHN---G-KTAIK  205 (219)
T ss_dssp             HHHSCCCEEEEEEECSEECSCCCSE-------EEESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEE---C-SEEHH
T ss_pred             HHhccCCcEEEEeCceEecCCCCCc-------cccCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCC---C-CccHH
Confidence            9 78899999999999999854211       11124567899999999999999999877789999987   5 48888


Q ss_pred             HHHHH
Q 046297          319 DFKAL  323 (331)
Q Consensus       319 e~~~~  323 (331)
                      |+.+.
T Consensus       206 e~~~~  210 (219)
T 3dqp_A          206 EALES  210 (219)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            88763

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-33  Score=251.71  Aligned_cols=229  Identities=16%  Similarity=0.169  Sum_probs=175.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      ||+||||||+||||++|+++|+++  |+.|.+..|+......+...+.++.+|+.| +.+.++++++|+|||+|+.... 
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~-   76 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSES--NEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDV-   76 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTT--SCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCC-
T ss_pred             CCEEEEECCCchHHHHHHHHHHhC--CCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCCh-
Confidence            468999999999999999999999  855554444544445556678999999999 8899999999999999985322 


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--C----CCCCCcchHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--P----LNSLGNGNILVWKRK  235 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~----~~~~~~~~y~~sK~~  235 (331)
                           .....+++..+       ++|+.++.+++++|++.++++||++||..++....  +    .+..+.+.|+.+|..
T Consensus        77 -----~~~~~~~~~~~-------~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  144 (313)
T 3ehe_A           77 -----RIGAENPDEIY-------RNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLA  144 (313)
T ss_dssp             -----C-CCCCHHHHH-------HHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             -----hhhhhCHHHHH-------HHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHH
Confidence                 22234445544       88999999999999999999999999987653221  1    111223679999999


Q ss_pred             HHHHHH----hcCCCEEEEecCcccCCCcc-------hhhhhccC-CccccC---CcccccCHHHHHHHHHHHhcCcccC
Q 046297          236 AEQYLA----DSGIPYTIIRAGGLQDKEGG-------IRELLVGK-DDELLQ---TETRTIARADVAEVCIQALQFEEAK  300 (331)
Q Consensus       236 ~e~~~~----~~~~~~~ilrp~~v~g~~~~-------~~~~~~~~-~~~~~~---~~~~~i~v~Dva~~~~~~l~~~~~~  300 (331)
                      +|.+++    +.+++++++||+++||+...       +.....+. ...+.+   ..++++|++|+|++++.+++. ...
T Consensus       145 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~  223 (313)
T 3ehe_A          145 CEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG-DER  223 (313)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-CSS
T ss_pred             HHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-CCC
Confidence            998876    46999999999999999643       12222332 222332   347899999999999999983 345


Q ss_pred             CceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          301 FKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       301 ~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++||+++   ++++++.|+++.+.+.+|+
T Consensus       224 ~~~~ni~~---~~~~s~~e~~~~i~~~~g~  250 (313)
T 3ehe_A          224 VNIFNIGS---EDQIKVKRIAEIVCEELGL  250 (313)
T ss_dssp             EEEEECCC---SCCEEHHHHHHHHHHHTTC
T ss_pred             CceEEECC---CCCeeHHHHHHHHHHHhCC
Confidence            78999999   8999999999999999874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=2e-33  Score=243.96  Aligned_cols=216  Identities=25%  Similarity=0.387  Sum_probs=173.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCC-cEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GAD-DLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~-~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ...+|+||||||+|+||++++++|+++  |++|++++|++++.+.+. .++ +++.+|++  +.+.++++++|+|||+||
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag   93 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAG   93 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCC
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCC
Confidence            445789999999999999999999999  999999999988776653 368 99999999  778889999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKA  236 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~  236 (331)
                      ....          .+++..+       ++|+.++.+++++|++.++++||++||.++..+....  .....|+.+|..+
T Consensus        94 ~~~~----------~~~~~~~-------~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~--~~~~~Y~~sK~~~  154 (236)
T 3e8x_A           94 SGPH----------TGADKTI-------LIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGP--MNMRHYLVAKRLA  154 (236)
T ss_dssp             CCTT----------SCHHHHH-------HTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSC--GGGHHHHHHHHHH
T ss_pred             CCCC----------CCccccc-------hhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCh--hhhhhHHHHHHHH
Confidence            6321          2344444       8899999999999999999999999998765442111  2336799999999


Q ss_pred             HHHHHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCC
Q 046297          237 EQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       237 e~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t  316 (331)
                      |+++++.+++++++|||+++|+..........    ......++++++|+|++++.+++++...|++|++++   + ..+
T Consensus       155 e~~~~~~gi~~~~lrpg~v~~~~~~~~~~~~~----~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~---~-~~~  226 (236)
T 3e8x_A          155 DDELKRSSLDYTIVRPGPLSNEESTGKVTVSP----HFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN---G-DTP  226 (236)
T ss_dssp             HHHHHHSSSEEEEEEECSEECSCCCSEEEEES----SCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEE---C-SEE
T ss_pred             HHHHHHCCCCEEEEeCCcccCCCCCCeEEecc----CCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeC---C-CcC
Confidence            99999999999999999999986421111111    112247889999999999999999877889999998   6 599


Q ss_pred             HHHHHHHHH
Q 046297          317 TKDFKALFS  325 (331)
Q Consensus       317 ~~e~~~~~~  325 (331)
                      +.|+++.++
T Consensus       227 ~~e~~~~i~  235 (236)
T 3e8x_A          227 IAKVVEQLG  235 (236)
T ss_dssp             HHHHHHTC-
T ss_pred             HHHHHHHhc
Confidence            999998765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=3.2e-33  Score=256.07  Aligned_cols=225  Identities=21%  Similarity=0.259  Sum_probs=177.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      ...+|+||||||+||||++|++.|+++  |++|++++|+++.     .++.++.+|+.|.+.+.++++++|+|||+|+..
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~   88 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM   88 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence            334688999999999999999999999  9999999998765     558999999999999999999999999999864


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC----------CCCCCCCCcch
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL----------NHPLNSLGNGN  228 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~----------~~~~~~~~~~~  228 (331)
                      ....        .+++       ...++|+.++.+++++|++.++++||++||.+++..          ..+.  ...+.
T Consensus        89 ~~~~--------~~~~-------~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~--~~~~~  151 (347)
T 4id9_A           89 SWAP--------ADRD-------RMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPL--CPNSP  151 (347)
T ss_dssp             CSSG--------GGHH-------HHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCC--CCCSH
T ss_pred             Ccch--------hhHH-------HHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCC--CCCCh
Confidence            3211        1112       234889999999999999999999999999876543          1122  22367


Q ss_pred             HHHHHHHHHHHHH----hcCCCEEEEecCccc-------------CCCcc-------------------hhhhhccCCcc
Q 046297          229 ILVWKRKAEQYLA----DSGIPYTIIRAGGLQ-------------DKEGG-------------------IRELLVGKDDE  272 (331)
Q Consensus       229 y~~sK~~~e~~~~----~~~~~~~ilrp~~v~-------------g~~~~-------------------~~~~~~~~~~~  272 (331)
                      |+.+|..+|++++    +.+++++++||+++|             |+...                   ......+....
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (347)
T 4id9_A          152 YGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSH  231 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeE
Confidence            9999999998886    468999999999999             76521                   11222333333


Q ss_pred             cc---CCcccc----cCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          273 LL---QTETRT----IARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       273 ~~---~~~~~~----i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +.   ...+++    +|++|+|++++.+++++...+++||+++   ++.+|+.|+++.+.+++|+
T Consensus       232 ~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  293 (347)
T 4id9_A          232 ILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGA---DEPADFAALLPKIAALTGL  293 (347)
T ss_dssp             EEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESC---SSCEEHHHHHHHHHHHHCC
T ss_pred             EeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECC---CCcccHHHHHHHHHHHhCC
Confidence            32   234677    9999999999999998866688999999   8999999999999999874

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=4.6e-33  Score=248.49  Aligned_cols=219  Identities=17%  Similarity=0.192  Sum_probs=176.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC-CCEEEEcccCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG-IDALIILTSAV  158 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~-~d~Vi~~ag~~  158 (331)
                      |++|+||||| +||||++|++.|+++  |++|++++|++++   +..+++++.+|+.|++.+.+++++ +|+|||+|+..
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~--g~~V~~~~r~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~   74 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQ--GHEVTGLRRSAQP---MPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAAS   74 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEECTTSC---CCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCccc---cccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence            3467899999 599999999999999  9999999998765   346799999999999999999987 99999999852


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCCCCcchHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNSLGNGNIL  230 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~~~~~~y~  230 (331)
                      .           .+++..       .++|+.++.+++++|++.++++|||+||.+++..        ..+..  +.+.|+
T Consensus        75 ~-----------~~~~~~-------~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~--p~~~Y~  134 (286)
T 3gpi_A           75 E-----------YSDEHY-------RLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPI--AKDFSG  134 (286)
T ss_dssp             H-----------HC------------CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCC--CCSHHH
T ss_pred             C-----------CCHHHH-------HHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCC--CCChhh
Confidence            1           122333       3889999999999999999999999999876432        22222  236799


Q ss_pred             HHHHHHHHHHHhcCCCEEEEecCcccCCCcc-hhhhhccCCccc--cCCcccccCHHHHHHHHHHHhcCc--ccCCceEE
Q 046297          231 VWKRKAEQYLADSGIPYTIIRAGGLQDKEGG-IRELLVGKDDEL--LQTETRTIARADVAEVCIQALQFE--EAKFKAFD  305 (331)
Q Consensus       231 ~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~  305 (331)
                      .+|..+|++ +++ ++++++||+++||+... +...+.. ....  .+..++++|++|+|++++.+++++  ...+++||
T Consensus       135 ~sK~~~E~~-~~~-~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~  211 (286)
T 3gpi_A          135 KRMLEAEAL-LAA-YSSTILRFSGIYGPGRLRMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYI  211 (286)
T ss_dssp             HHHHHHHHH-GGG-SSEEEEEECEEEBTTBCHHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEE
T ss_pred             HHHHHHHHH-Hhc-CCeEEEecccccCCCchhHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEE
Confidence            999999999 777 99999999999999865 2222223 2111  134478999999999999999885  45678999


Q ss_pred             eccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          306 LASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       306 i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++   ++.+|+.|+++.+.+.+|+
T Consensus       212 ~~~---~~~~s~~e~~~~i~~~~g~  233 (286)
T 3gpi_A          212 VTD---NQPLPVHDLLRWLADRQGI  233 (286)
T ss_dssp             ECC---SCCEEHHHHHHHHHHHTTC
T ss_pred             EeC---CCCCCHHHHHHHHHHHcCC
Confidence            999   8999999999999999874

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=5e-33  Score=251.06  Aligned_cols=228  Identities=17%  Similarity=0.183  Sum_probs=178.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+||||||+||||++|+++|+++  |++|++++|+++..... ...++++.+|+.|.+ +.+++++ |+|||+|+.... 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~-   75 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEV-   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSS-
T ss_pred             CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCc-
Confidence            57999999999999999999999  99999999987654443 456899999999999 8888888 999999995322 


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--C----CCCCCcchHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--P----LNSLGNGNILVWKRK  235 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~----~~~~~~~~y~~sK~~  235 (331)
                           .....+++..+       ++|+.++.+++++|++.++++||++||..++....  +    ....+.+.|+.+|..
T Consensus        76 -----~~~~~~~~~~~-------~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~  143 (312)
T 3ko8_A           76 -----RLSTTEPIVHF-------NENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAA  143 (312)
T ss_dssp             -----SGGGSCHHHHH-------HHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred             -----hhhhhCHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHH
Confidence                 11223344444       88999999999999999999999999987643221  1    111223679999999


Q ss_pred             HHHHHHh----cCCCEEEEecCcccCCCcc-------hhhhhccC-CccccC---CcccccCHHHHHHHHHHHhcC---c
Q 046297          236 AEQYLAD----SGIPYTIIRAGGLQDKEGG-------IRELLVGK-DDELLQ---TETRTIARADVAEVCIQALQF---E  297 (331)
Q Consensus       236 ~e~~~~~----~~~~~~ilrp~~v~g~~~~-------~~~~~~~~-~~~~~~---~~~~~i~v~Dva~~~~~~l~~---~  297 (331)
                      +|++++.    .+++++++||+++||+...       ......+. ...+.+   ..++++|++|+|++++.++++   +
T Consensus       144 ~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~  223 (312)
T 3ko8_A          144 GEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM  223 (312)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcccc
Confidence            9988764    5999999999999999643       12222232 222222   347899999999999999987   4


Q ss_pred             ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          298 EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       298 ~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ...+++||+++   ++.+++.|+++.+.+.+|+
T Consensus       224 ~~~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  253 (312)
T 3ko8_A          224 DAPFLALNVGN---VDAVRVLDIAQIVAEVLGL  253 (312)
T ss_dssp             CCSEEEEEESC---SSCEEHHHHHHHHHHHHTC
T ss_pred             CCCCcEEEEcC---CCceeHHHHHHHHHHHhCC
Confidence            45678999999   8999999999999999874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4.2e-33  Score=254.61  Aligned_cols=229  Identities=21%  Similarity=0.206  Sum_probs=177.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc--CCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ--GIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~--~~d~V  151 (331)
                      +|+||||||+||||++++++|+++  |++|++++|+.+.....        ...+.++.+|++|++.+.++++  ++|+|
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAH--GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            578999999999999999999999  99999999986543321        3468999999999999999998  89999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNS  223 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~  223 (331)
                      ||+||.....      ....++...       .++|+.++.+++++|++.++++||++||..++..        ..+.. 
T Consensus        83 ih~A~~~~~~------~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~-  148 (341)
T 3enk_A           83 IHFAALKAVG------ESVAKPIEY-------YRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLS-  148 (341)
T ss_dssp             EECCCCCCHH------HHHHCHHHH-------HHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCB-
T ss_pred             EECccccccC------ccccChHHH-------HHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCC-
Confidence            9999964321      011122233       3789999999999999999999999999865422        12222 


Q ss_pred             CCcchHHHHHHHHHHHHHh----c-CCCEEEEecCcccCCCcc-----------------hhhhhccCCccc--c-----
Q 046297          224 LGNGNILVWKRKAEQYLAD----S-GIPYTIIRAGGLQDKEGG-----------------IRELLVGKDDEL--L-----  274 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~~----~-~~~~~ilrp~~v~g~~~~-----------------~~~~~~~~~~~~--~-----  274 (331)
                       ..+.|+.+|..+|++++.    . +++++++||+++||+...                 +.....+....+  .     
T Consensus       149 -~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (341)
T 3enk_A          149 -ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYP  227 (341)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             -CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccC
Confidence             236799999999998874    3 499999999999998431                 112222322221  1     


Q ss_pred             ----CCcccccCHHHHHHHHHHHhcCc--ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          275 ----QTETRTIARADVAEVCIQALQFE--EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       275 ----~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                          ...++++|++|+|++++.+++++  ...+++||+++   ++.+++.|+++.+.+++|+
T Consensus       228 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  286 (341)
T 3enk_A          228 TPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGT---GRGYSVLEVVRAFEKASGR  286 (341)
T ss_dssp             STTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESC---SCCEEHHHHHHHHHHHHCS
T ss_pred             CCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCC---CCceeHHHHHHHHHHHhCC
Confidence                23478999999999999999873  35678999999   8999999999999999874

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=2.3e-32  Score=243.84  Aligned_cols=214  Identities=19%  Similarity=0.251  Sum_probs=176.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+||||||+||||++++++|+++.+|++|++++|++++...+ ..+++++.+|+.|++.+.++++++|+|||+++...  
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~--   78 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHY--   78 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCS--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCc--
Confidence            469999999999999999999874489999999987765544 34688999999999999999999999999998410  


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA  241 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  241 (331)
                                  .         .++|+.++.+++++|++.++++||++||.+++.  .+      ..|+.+|..+|++++
T Consensus        79 ------------~---------~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--~~------~~y~~~K~~~E~~~~  129 (287)
T 2jl1_A           79 ------------D---------NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE--SI------IPLAHVHLATEYAIR  129 (287)
T ss_dssp             ------------C---------HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG--CC------STHHHHHHHHHHHHH
T ss_pred             ------------C---------chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--CC------CchHHHHHHHHHHHH
Confidence                        0         045899999999999999999999999988742  11      359999999999999


Q ss_pred             hcCCCEEEEecCcccCCC-cc-hhhhhccCCccc--cCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCH
Q 046297          242 DSGIPYTIIRAGGLQDKE-GG-IRELLVGKDDEL--LQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       242 ~~~~~~~ilrp~~v~g~~-~~-~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~  317 (331)
                      +.+++++++||+.++++. .. +...+.......  .+..+++++++|+|++++.+++++...+++||+++   ++.+|+
T Consensus       130 ~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~---~~~~s~  206 (287)
T 2jl1_A          130 TTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVS---NQPWTF  206 (287)
T ss_dssp             HTTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECC---SSCBCH
T ss_pred             HcCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecC---CCcCCH
Confidence            999999999999988864 22 222222222222  23457899999999999999988766788999999   889999


Q ss_pred             HHHHHHHHHhhcc
Q 046297          318 KDFKALFSQITTR  330 (331)
Q Consensus       318 ~e~~~~~~~~~g~  330 (331)
                      .|+++.+.+++|+
T Consensus       207 ~e~~~~i~~~~g~  219 (287)
T 2jl1_A          207 DELAQILSEVSGK  219 (287)
T ss_dssp             HHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHCC
Confidence            9999999999874

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.2e-32  Score=252.85  Aligned_cols=231  Identities=16%  Similarity=0.100  Sum_probs=179.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----hhhc--------CCCCcEEEccCCCcccHHHHhcC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----KQKI--------GGADDLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----~~~l--------~~~~~~v~~Dl~d~~~~~~~l~~  147 (331)
                      +.+|+||||||+||||++|+++|+++  |++|++++|++..    ...+        ..++.++.+|+.|.+.+.+++++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  102 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG  102 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC
Confidence            45789999999999999999999999  9999999997632    2221        24688999999999999999999


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC----
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL----  221 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~----  221 (331)
                      +|+|||+||.....      ....+++..+       ++|+.++.+++++|++.++++||++||.+++....  +.    
T Consensus       103 ~d~vih~A~~~~~~------~~~~~~~~~~-------~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~  169 (352)
T 1sb8_A          103 VDYVLHQAALGSVP------RSINDPITSN-------ATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT  169 (352)
T ss_dssp             CSEEEECCSCCCHH------HHHHCHHHHH-------HHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTC
T ss_pred             CCEEEECCcccCch------hhhhCHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCC
Confidence            99999999963210      0012233333       78999999999999999999999999987643321  11    


Q ss_pred             CCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch------------hhhhccCCccccC---CcccccC
Q 046297          222 NSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI------------RELLVGKDDELLQ---TETRTIA  282 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~------------~~~~~~~~~~~~~---~~~~~i~  282 (331)
                      ...+.+.|+.+|..+|.+++    +.+++++++||+++||+....            .....+....+++   ..+++++
T Consensus       170 ~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  249 (352)
T 1sb8_A          170 IGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCY  249 (352)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEE
Confidence            01123679999999999876    358999999999999986421            1223344433333   3468999


Q ss_pred             HHHHHHHHHHHhcCc-ccCCceEEeccCCCCCCCCHHHHHHHHHHhh
Q 046297          283 RADVAEVCIQALQFE-EAKFKAFDLASKPEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       283 v~Dva~~~~~~l~~~-~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~  328 (331)
                      ++|+|++++.++..+ ...+++||+++   ++.+|+.|+++.+.+.+
T Consensus       250 v~Dva~a~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~~~  293 (352)
T 1sb8_A          250 IENTVQANLLAATAGLDARNQVYNIAV---GGRTSLNQLFFALRDGL  293 (352)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEESC---SCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccCCCceEEeCC---CCCccHHHHHHHHHHHH
Confidence            999999999998863 45678999999   89999999999999988

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=6e-32  Score=250.86  Aligned_cols=231  Identities=15%  Similarity=0.114  Sum_probs=179.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      .+|+||||||+||||++|+++|+++  ||+|++++|++.+.... ..+++++.+|+.|++.+.++++++|+|||+|+...
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~  105 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG  105 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecC
Confidence            4679999999999999999999999  99999999987654332 34688999999999999999999999999999632


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC-------------CCCCCc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP-------------LNSLGN  226 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~-------------~~~~~~  226 (331)
                      ...     ....+++..+       ++|+.++.+++++|++.++++||++||.+++.....             ....+.
T Consensus       106 ~~~-----~~~~~~~~~~-------~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~  173 (379)
T 2c5a_A          106 GMG-----FIQSNHSVIM-------YNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ  173 (379)
T ss_dssp             CHH-----HHTTCHHHHH-------HHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS
T ss_pred             ccc-----ccccCHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCC
Confidence            100     0012333333       889999999999999999999999999876542110             011223


Q ss_pred             chHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch------------hhhhccCC-ccccC---CcccccCHHHH
Q 046297          227 GNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI------------RELLVGKD-DELLQ---TETRTIARADV  286 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~------------~~~~~~~~-~~~~~---~~~~~i~v~Dv  286 (331)
                      +.|+.+|..+|.+++    +.+++++++||+++||+....            .....+.. ..+++   ..++++|++|+
T Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv  253 (379)
T 2c5a_A          174 DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC  253 (379)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHH
Confidence            679999999998875    358999999999999986421            12223433 23332   34789999999


Q ss_pred             HHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          287 AEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       287 a~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++++.+++++  .+++||+++   ++.+++.|+++.+.+++|+
T Consensus       254 a~ai~~~l~~~--~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  292 (379)
T 2c5a_A          254 VEGVLRLTKSD--FREPVNIGS---DEMVSMNEMAEMVLSFEEK  292 (379)
T ss_dssp             HHHHHHHHHSS--CCSCEEECC---CCCEEHHHHHHHHHHTTTC
T ss_pred             HHHHHHHhhcc--CCCeEEeCC---CCccCHHHHHHHHHHHhCC
Confidence            99999999876  467999999   8999999999999998874

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.6e-31  Score=238.40  Aligned_cols=209  Identities=17%  Similarity=0.204  Sum_probs=170.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      +|+|||||| ||||++|+++|+++  ||+|++++|++++...+. .+++++.+|+.|.+     ++++|+|||+|+....
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~   76 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSG   76 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTT
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCcccc
Confidence            578999998 99999999999999  999999999987765543 56899999999855     7899999999986322


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH--cCCCeEEEEccCCCCCC--------CCCCCCCCcchHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA--AGAKQIVLVGSMGGTNL--------NHPLNSLGNGNIL  230 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~--~~vk~~v~~SS~~~~~~--------~~~~~~~~~~~y~  230 (331)
                      .                          ...+.++++++++  .++++|||+||.+++..        ..+..  +.+.|+
T Consensus        77 ~--------------------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~--p~~~Y~  128 (286)
T 3ius_A           77 G--------------------------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLT--PTAARG  128 (286)
T ss_dssp             B--------------------------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCC--CCSHHH
T ss_pred             c--------------------------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCC--CCCHHH
Confidence            1                          1236789999998  78999999999876432        22222  236799


Q ss_pred             HHHHHHHHHHHhc-CCCEEEEecCcccCCCcch-hhhhccCCcccc--CCcccccCHHHHHHHHHHHhcCcccCCceEEe
Q 046297          231 VWKRKAEQYLADS-GIPYTIIRAGGLQDKEGGI-RELLVGKDDELL--QTETRTIARADVAEVCIQALQFEEAKFKAFDL  306 (331)
Q Consensus       231 ~sK~~~e~~~~~~-~~~~~ilrp~~v~g~~~~~-~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i  306 (331)
                      .+|+.+|++++++ +++++++||+++||+.... ..+..+....+.  +..++++|++|+|++++.+++++. .+++||+
T Consensus       129 ~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i  207 (286)
T 3ius_A          129 RWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD-PGAVYNV  207 (286)
T ss_dssp             HHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEE
T ss_pred             HHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC-CCCEEEE
Confidence            9999999999998 9999999999999997653 333344444433  345789999999999999999886 5789999


Q ss_pred             ccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          307 ASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       307 ~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++   ++.+++.|+++.+.+.+|+
T Consensus       208 ~~---~~~~s~~e~~~~i~~~~g~  228 (286)
T 3ius_A          208 CD---DEPVPPQDVIAYAAELQGL  228 (286)
T ss_dssp             CC---SCCBCHHHHHHHHHHHHTC
T ss_pred             eC---CCCccHHHHHHHHHHHcCC
Confidence            99   8999999999999999874

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=2.2e-32  Score=247.82  Aligned_cols=225  Identities=16%  Similarity=0.160  Sum_probs=176.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC--CCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG--IDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~ag~~~  159 (331)
                      .++||||||+||||++|+++|+++  |++|++++|++.. ..+  ++.++.+|++|++.+.+++++  +|+|||+||...
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~~l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   86 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEA-KLP--NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS   86 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTC-CCT--TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             cceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcc-ccc--eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence            578999999999999999999999  9999999998765 222  578899999999999999985  999999999643


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCCCC----------CCCCCCCcch
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTNLN----------HPLNSLGNGN  228 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~~~----------~~~~~~~~~~  228 (331)
                      ..      ....+++..+       ++|+.++.+++++|++. ++++||++||..++...          .+..  +.+.
T Consensus        87 ~~------~~~~~~~~~~-------~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~--~~~~  151 (321)
T 2pk3_A           87 VK------DSWLNKKGTF-------STNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLR--PMSP  151 (321)
T ss_dssp             HH------HHTTCHHHHH-------HHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB--CCSH
T ss_pred             hh------hhhhcHHHHH-------HHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC--CCCc
Confidence            10      1112333344       88999999999999876 68999999998655322          1222  2367


Q ss_pred             HHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcch--------hhhhc---c--CCccccC---CcccccCHHHHHH
Q 046297          229 ILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGGI--------RELLV---G--KDDELLQ---TETRTIARADVAE  288 (331)
Q Consensus       229 y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~~--------~~~~~---~--~~~~~~~---~~~~~i~v~Dva~  288 (331)
                      |+.+|..+|.+++.    ++++++++||+++||+....        .....   +  ....+.+   ..+++++++|+|+
T Consensus       152 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~  231 (321)
T 2pk3_A          152 YGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQ  231 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHH
Confidence            99999999998875    49999999999999987531        11222   3  2222322   3477899999999


Q ss_pred             HHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          289 VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++.+++++ ..+++||+++   ++.+++.|+++.+.+.+|+
T Consensus       232 a~~~~~~~~-~~g~~~~i~~---~~~~s~~e~~~~i~~~~g~  269 (321)
T 2pk3_A          232 AYWLLSQYG-KTGDVYNVCS---GIGTRIQDVLDLLLAMANV  269 (321)
T ss_dssp             HHHHHHHHC-CTTCEEEESC---SCEEEHHHHHHHHHHHSSS
T ss_pred             HHHHHHhCC-CCCCeEEeCC---CCCeeHHHHHHHHHHHhCC
Confidence            999999876 4578999998   8899999999999998874

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.3e-31  Score=247.09  Aligned_cols=228  Identities=13%  Similarity=0.128  Sum_probs=179.2

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHh--cCCCCeEEEEecCCc-------------hhhhc-CCCCcEEEccCCCcccHH
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKE--RSEQYAARGLVRTEE-------------SKQKI-GGADDLFIGDIRDSNSII  142 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~--~~~g~~V~~l~R~~~-------------~~~~l-~~~~~~v~~Dl~d~~~~~  142 (331)
                      ++.+|+||||||+||||++|+++|++  +  |++|++++|+..             ....+ ...+.++.+|++|++.+.
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHP--KAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCT--TSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCC--CCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            34578999999999999999999999  7  999999999754             11112 234789999999999999


Q ss_pred             HH-hcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC-C
Q 046297          143 PA-IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH-P  220 (331)
Q Consensus       143 ~~-l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~-~  220 (331)
                      ++ ..++|+|||+||....        ...+++..+       ++|+.++.+++++|++.+++ ||++||.+++.... +
T Consensus        85 ~~~~~~~D~vih~A~~~~~--------~~~~~~~~~-------~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~  148 (362)
T 3sxp_A           85 RLEKLHFDYLFHQAAVSDT--------TMLNQELVM-------KTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAP  148 (362)
T ss_dssp             HHTTSCCSEEEECCCCCGG--------GCCCHHHHH-------HHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSS
T ss_pred             HhhccCCCEEEECCccCCc--------cccCHHHHH-------HHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCC
Confidence            99 7899999999995332        223444444       89999999999999999986 99999976543221 1


Q ss_pred             C----CCCCcchHHHHHHHHHHHHHhcC--CCEEEEecCcccCCCcch------------hhhhccCCccccC---Cccc
Q 046297          221 L----NSLGNGNILVWKRKAEQYLADSG--IPYTIIRAGGLQDKEGGI------------RELLVGKDDELLQ---TETR  279 (331)
Q Consensus       221 ~----~~~~~~~y~~sK~~~e~~~~~~~--~~~~ilrp~~v~g~~~~~------------~~~~~~~~~~~~~---~~~~  279 (331)
                      .    ...+.+.|+.+|..+|++++.+.  ++++++||+++||+....            .....+....+.+   ..++
T Consensus       149 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (362)
T 3sxp_A          149 NVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRD  228 (362)
T ss_dssp             BCTTSCCCCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEE
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEc
Confidence            1    11223679999999999999765  889999999999997531            1223344444432   3478


Q ss_pred             ccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          280 TIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ++|++|+|++++.+++.+. .| +||+++   ++.+++.|+++.+.+.+|
T Consensus       229 ~i~v~Dva~ai~~~~~~~~-~g-~~~i~~---~~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          229 FVYIEDVIQANVKAMKAQK-SG-VYNVGY---SQARSYNEIVSILKEHLG  273 (362)
T ss_dssp             CEEHHHHHHHHHHHTTCSS-CE-EEEESC---SCEEEHHHHHHHHHHHHC
T ss_pred             cEEHHHHHHHHHHHHhcCC-CC-EEEeCC---CCCccHHHHHHHHHHHcC
Confidence            9999999999999998774 46 999999   899999999999999876

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=4e-32  Score=232.84  Aligned_cols=208  Identities=13%  Similarity=0.149  Sum_probs=149.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMK  162 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~  162 (331)
                      |+||||||+|+||++++++|+++  |++|++++|++++...+..+++++.+|++|++.  +++.++|+|||++|....  
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD--   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT--
T ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCCCEEEECCcCCcc--
Confidence            57999999999999999999999  999999999998877766779999999999987  788999999999996221  


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC-------CCCCCcchHHHHHHH
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP-------LNSLGNGNILVWKRK  235 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~-------~~~~~~~~y~~sK~~  235 (331)
                                          ....|+.++++++++|++.++++||++||.+++.....       ......+.|..+|..
T Consensus        75 --------------------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~  134 (221)
T 3ew7_A           75 --------------------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQ  134 (221)
T ss_dssp             --------------------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHH
T ss_pred             --------------------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHH
Confidence                                12669999999999999999999999999865332211       011122447788888


Q ss_pred             HHHH--HH--hcCCCEEEEecCcccCCCcchhhhhc-cCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCC
Q 046297          236 AEQY--LA--DSGIPYTIIRAGGLQDKEGGIRELLV-GKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKP  310 (331)
Q Consensus       236 ~e~~--~~--~~~~~~~ilrp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~  310 (331)
                      .|.+  ++  +.+++|+++||+++||+......... +....+.+.+.++++++|+|++++.+++++...+++||+++  
T Consensus       135 ~e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~--  212 (221)
T 3ew7_A          135 AKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAG--  212 (221)
T ss_dssp             HHHHHHHHTTTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--
T ss_pred             HHHHHHHHhhccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECC--
Confidence            8765  66  68999999999999998433222211 22222334456789999999999999999988899999998  


Q ss_pred             CCCCCCHHH
Q 046297          311 EGTGTPTKD  319 (331)
Q Consensus       311 ~~~~~t~~e  319 (331)
                       +...+.+|
T Consensus       213 -~~~~~~~~  220 (221)
T 3ew7_A          213 -KLEHHHHH  220 (221)
T ss_dssp             ---------
T ss_pred             -CCcccccc
Confidence             66666554

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=8.9e-32  Score=245.07  Aligned_cols=228  Identities=14%  Similarity=0.156  Sum_probs=179.8

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-C--CCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-G--GADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~--~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      ....+|+||||||+||||++|+++|+++  |++|++++|+....... .  .++.++.+|++|++.+.++++  ++|+||
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi   93 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVV   93 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGG--TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence            3445689999999999999999999999  99999999975443211 1  357899999999999999999  999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC----CCCC--CCc
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH----PLNS--LGN  226 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~----~~~~--~~~  226 (331)
                      |+||.....       ...+++         .++|+.++.+++++|++.++++||++||..++....    +...  .+.
T Consensus        94 h~A~~~~~~-------~~~~~~---------~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~  157 (330)
T 2pzm_A           94 HSAAAYKDP-------DDWAED---------AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPF  157 (330)
T ss_dssp             ECCCCCSCT-------TCHHHH---------HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCC
T ss_pred             ECCccCCCc-------cccChh---------HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCC
Confidence            999964320       111111         478999999999999999999999999997654321    1111  133


Q ss_pred             chHHHHHHHHHHHHHhcCCCEEEEecCcccCCCc--ch-----hhhhccCCccccC-C-cccccCHHHHHH-HHHHHhcC
Q 046297          227 GNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEG--GI-----RELLVGKDDELLQ-T-ETRTIARADVAE-VCIQALQF  296 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~--~~-----~~~~~~~~~~~~~-~-~~~~i~v~Dva~-~~~~~l~~  296 (331)
                      +.|+.+|..+|.+++..+++++++||+++|||..  ..     .....+.  .++. . .+++++++|+|+ +++.++++
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~Dva~~a~~~~~~~  235 (330)
T 2pzm_A          158 TSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDTVRDFLDMSDFLAIADLSLQEG  235 (330)
T ss_dssp             SHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESCEECEEEHHHHHHHHHHHTSTT
T ss_pred             ChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCCEecceeHHHHHHHHHHHHhhc
Confidence            6799999999999999899999999999999874  21     1122233  2222 1 478899999999 99999987


Q ss_pred             cccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          297 EEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       297 ~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +.  +++||+++   ++.+++.|+++.+.+.+|+
T Consensus       236 ~~--g~~~~v~~---~~~~s~~e~~~~i~~~~g~  264 (330)
T 2pzm_A          236 RP--TGVFNVST---GEGHSIKEVFDVVLDYVGA  264 (330)
T ss_dssp             CC--CEEEEESC---SCCEEHHHHHHHHHHHHTC
T ss_pred             CC--CCEEEeCC---CCCCCHHHHHHHHHHHhCC
Confidence            64  78999999   8899999999999998875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=3.1e-32  Score=252.57  Aligned_cols=230  Identities=17%  Similarity=0.093  Sum_probs=178.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchh-hhc--CCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESK-QKI--GGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~-~~l--~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ..+|+||||||+||||++|+++|+++  | ++|++++|+.... +.+  ..+++++.+|+.|++.+.++++++|+|||+|
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A  107 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLEL--GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLA  107 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHT--TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHc--CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECC
Confidence            34689999999999999999999999  9 9999999986543 223  2458899999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCC----------CCC---CC
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTN----------LNH---PL  221 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~----------~~~---~~  221 (331)
                      |.....      ....+++..       .++|+.++.+++++|++. ++++||++||..++.          +..   |.
T Consensus       108 ~~~~~~------~~~~~~~~~-------~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~  174 (377)
T 2q1s_A          108 TYHGNQ------SSIHDPLAD-------HENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSL  174 (377)
T ss_dssp             CCSCHH------HHHHCHHHH-------HHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCS
T ss_pred             CccCch------hhhhCHHHH-------HHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccc
Confidence            863210      001122333       388999999999999998 999999999987543          222   21


Q ss_pred             CCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCc---------ch------------hhhhccCCccccC-
Q 046297          222 NSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEG---------GI------------RELLVGKDDELLQ-  275 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~---------~~------------~~~~~~~~~~~~~-  275 (331)
                       ..+.+.|+.+|..+|++++.    .+++++++||+++||+..         ..            .....+....+++ 
T Consensus       175 -~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  253 (377)
T 2q1s_A          175 -HNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENG  253 (377)
T ss_dssp             -SCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGG
T ss_pred             -cCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCC
Confidence             02236799999999998864    589999999999999865         21            1222344433332 


Q ss_pred             --CcccccCHHHHHHH-HHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          276 --TETRTIARADVAEV-CIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       276 --~~~~~i~v~Dva~~-~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                        ..+++++++|+|++ ++.+++++. .| +||+++   ++.+++.|+++.+.+++|+
T Consensus       254 g~~~~~~i~v~Dva~a~i~~~~~~~~-~g-~~~i~~---~~~~s~~e~~~~i~~~~g~  306 (377)
T 2q1s_A          254 GVATRDFIFVEDVANGLIACAADGTP-GG-VYNIAS---GKETSIADLATKINEITGN  306 (377)
T ss_dssp             GCCEECCEEHHHHHHHHHHHHHHCCT-TE-EEECCC---CCCEEHHHHHHHHHHHHTC
T ss_pred             CCeEEeeEEHHHHHHHHHHHHHhcCC-CC-eEEecC---CCceeHHHHHHHHHHHhCC
Confidence              45789999999999 999998765 56 999999   8899999999999999874

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=5.2e-32  Score=244.42  Aligned_cols=227  Identities=18%  Similarity=0.213  Sum_probs=174.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      |+||||||+||||++++++|+++  |++|++++|... ....+..++.++.+|++|++.+.++++  ++|+|||+|+...
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   78 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQAS   78 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT--TCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccC
Confidence            47999999999999999999999  999999999543 233344568899999999999999998  8999999998632


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC-CCCCC---CCCC----CCCCcchHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM-GGTNL---NHPL----NSLGNGNILV  231 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~-~~~~~---~~~~----~~~~~~~y~~  231 (331)
                      ..      ....+++..       .++|+.++.+++++|++.++++||++||. .++..   ..+.    ...+.+.|+.
T Consensus        79 ~~------~~~~~~~~~-------~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~  145 (311)
T 2p5y_A           79 VK------VSVEDPVLD-------FEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAA  145 (311)
T ss_dssp             HH------HHHHCHHHH-------HHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHH
T ss_pred             ch------hhhhCHHHH-------HHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHH
Confidence            10      011223333       38899999999999999999999999998 33211   1111    1112367999


Q ss_pred             HHHHHHHHHH----hcCCCEEEEecCcccCCCcch-----------hhhhccCCcccc-----C---CcccccCHHHHHH
Q 046297          232 WKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI-----------RELLVGKDDELL-----Q---TETRTIARADVAE  288 (331)
Q Consensus       232 sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~-----------~~~~~~~~~~~~-----~---~~~~~i~v~Dva~  288 (331)
                      +|..+|.+++    +.+++++++||+++||+....           .....+....+.     +   ..++++|++|+|+
T Consensus       146 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  225 (311)
T 2p5y_A          146 SKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE  225 (311)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHH
Confidence            9999998876    468999999999999986421           122234433333     2   2368999999999


Q ss_pred             HHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          289 VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++.+++++   +++||+++   ++.+|+.|+++.+.+.+|+
T Consensus       226 a~~~~~~~~---~~~~~i~~---~~~~s~~e~~~~i~~~~g~  261 (311)
T 2p5y_A          226 AHALALFSL---EGIYNVGT---GEGHTTREVLMAVAEAAGK  261 (311)
T ss_dssp             HHHHHHHHC---CEEEEESC---SCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHhCC---CCEEEeCC---CCCccHHHHHHHHHHHhCC
Confidence            999999765   68999999   8999999999999998874

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=6.5e-32  Score=245.61  Aligned_cols=229  Identities=14%  Similarity=0.176  Sum_probs=176.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~  158 (331)
                      ||+||||||+||||++|+++|+++  |++|++++|+.... +.+..+++++.+|+.|++.+.++++  ++|+|||+||..
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~   78 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS   78 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence            478999999999999999999999  99999999976432 3344468899999999999999998  899999999963


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC--------CCCCCCCcchHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN--------HPLNSLGNGNIL  230 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~--------~~~~~~~~~~y~  230 (331)
                      ...      ....+++..       .++|+.++.+++++|++.++++||++||.+++...        .+.  .+.+.|+
T Consensus        79 ~~~------~~~~~~~~~-------~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~--~~~~~Y~  143 (330)
T 2c20_A           79 LVG------VSMEKPLQY-------YNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMT--NPTNTYG  143 (330)
T ss_dssp             CHH------HHHHSHHHH-------HHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCC--CCSSHHH
T ss_pred             Ccc------ccccCHHHH-------HHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCC--CCCChHH
Confidence            210      001122333       38899999999999999999999999998765322        222  1236799


Q ss_pred             HHHHHHHHHHHh----cCCCEEEEecCcccCCCc------------chh----hhhccCC--cccc---------CCccc
Q 046297          231 VWKRKAEQYLAD----SGIPYTIIRAGGLQDKEG------------GIR----ELLVGKD--DELL---------QTETR  279 (331)
Q Consensus       231 ~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~------------~~~----~~~~~~~--~~~~---------~~~~~  279 (331)
                      .+|..+|++++.    .+++++++||+++||+..            .+.    ....+..  ..++         ...++
T Consensus       144 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  223 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRD  223 (330)
T ss_dssp             HHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEe
Confidence            999999998764    589999999999999852            111    1122221  1121         23478


Q ss_pred             ccCHHHHHHHHHHHhcCccc--CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          280 TIARADVAEVCIQALQFEEA--KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~~--~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++|++|+|++++.+++++..  .+++||+++   ++.+|+.|+++.+.+++|+
T Consensus       224 ~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  273 (330)
T 2c20_A          224 YIHVEDLVAAHFLGLKDLQNGGESDFYNLGN---GNGFSVKEIVDAVREVTNH  273 (330)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTCCCEEEECCC---TTCBCHHHHHHHHHHHTTS
T ss_pred             eEeHHHHHHHHHHHHhccccCCCCCeEEeCC---CCCccHHHHHHHHHHHhCC
Confidence            99999999999999987542  367999998   8999999999999998874

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.98  E-value=1.1e-32  Score=248.56  Aligned_cols=224  Identities=14%  Similarity=0.072  Sum_probs=171.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC--CCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG--IDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~ag~  157 (331)
                      +.+|+||||||+||||++|+++|+++  |+      +....    ...++++.+|+.|++.+.+++++  +|+|||+|+.
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~------~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~   71 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADG--AG------LPGED----WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAM   71 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTT--TC------CTTCE----EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhc--CC------ccccc----ccccCceecccCCHHHHHHHHhhcCCCEEEECcee
Confidence            56789999999999999999999999  87      21111    11256668999999999999986  9999999997


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC--------CCCCc-
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL--------NSLGN-  226 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~--------~~~~~-  226 (331)
                      ....     .....+|...+       ++|+.++.+++++|++.++++|||+||..++....  +.        .+.+. 
T Consensus        72 ~~~~-----~~~~~~~~~~~-------~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  139 (319)
T 4b8w_A           72 VGGL-----FRNIKYNLDFW-------RKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSN  139 (319)
T ss_dssp             CCCH-----HHHTTCHHHHH-------HHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSS
T ss_pred             cccc-----cccccCHHHHH-------HHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCc
Confidence            4311     01123334444       88999999999999999999999999997653321  11        11111 


Q ss_pred             chHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc------------hhh----hhccCCccccC---CcccccCH
Q 046297          227 GNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG------------IRE----LLVGKDDELLQ---TETRTIAR  283 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~------------~~~----~~~~~~~~~~~---~~~~~i~v  283 (331)
                      ..|+.+|..+|++++.    .+++++++||+++||+...            ...    ...+....+++   ..++++|+
T Consensus       140 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  219 (319)
T 4b8w_A          140 FGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYS  219 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEH
T ss_pred             chHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeH
Confidence            2599999999988764    7999999999999999753            222    33455544443   34789999


Q ss_pred             HHHHHHHHHHhcCcc-cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          284 ADVAEVCIQALQFEE-AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~-~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +|+|++++.+++++. ..+++||+++   ++.+|+.|+++.+.+.+|+
T Consensus       220 ~Dva~a~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  264 (319)
T 4b8w_A          220 LDLAQLFIWVLREYNEVEPIILSVGE---EDEVSIKEAAEAVVEAMDF  264 (319)
T ss_dssp             HHHHHHHHHHHHHCCCSSCEEECCCG---GGCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhccccCCceEEEecC---CCceeHHHHHHHHHHHhCC
Confidence            999999999998753 4567999999   8999999999999999874

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.98  E-value=1.4e-31  Score=244.02  Aligned_cols=231  Identities=12%  Similarity=0.124  Sum_probs=175.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc--hhh---hc--CCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE--SKQ---KI--GGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~--~~~---~l--~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      .+|+||||||+||||++|+++|++++++++|++++|...  ..+   .+  ..+++++.+|++|++.+.+++.++|+|||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            357899999999999999999999932399999999642  122   22  23578899999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC-CeEEEEccCCCCCC--------CCCCCCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA-KQIVLVGSMGGTNL--------NHPLNSL  224 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-k~~v~~SS~~~~~~--------~~~~~~~  224 (331)
                      +||.....      ....+++..       .++|+.++.+++++|++.+. ++||++||..++..        ..+..  
T Consensus        82 ~A~~~~~~------~~~~~~~~~-------~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~--  146 (336)
T 2hun_A           82 LAAESHVD------RSISSPEIF-------LHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLM--  146 (336)
T ss_dssp             CCCCCCHH------HHHHCTHHH-------HHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCC--
T ss_pred             CCCCcChh------hhhhCHHHH-------HHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCC--
Confidence            99963210      011233333       38899999999999998875 79999999865322        11222  


Q ss_pred             CcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc---h-----hhhhccCCccccC---CcccccCHHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG---I-----RELLVGKDDELLQ---TETRTIARADVAEV  289 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~---~-----~~~~~~~~~~~~~---~~~~~i~v~Dva~~  289 (331)
                      +.+.|+.+|..+|.+++.    ++++++++||+++||+...   +     .....+....+.+   ..+++++++|+|++
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  226 (336)
T 2hun_A          147 PSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRA  226 (336)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHH
Confidence            236799999999988763    6899999999999998742   1     1223344333322   34789999999999


Q ss_pred             HHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          290 CIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       290 ~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++.+++++ ..|++||+++   ++.+++.|+++.+.+++|+
T Consensus       227 ~~~~~~~~-~~g~~~~v~~---~~~~s~~e~~~~i~~~~g~  263 (336)
T 2hun_A          227 IELVLLKG-ESREIYNISA---GEEKTNLEVVKIILRLMGK  263 (336)
T ss_dssp             HHHHHHHC-CTTCEEEECC---SCEECHHHHHHHHHHHTTC
T ss_pred             HHHHHhCC-CCCCEEEeCC---CCcccHHHHHHHHHHHhCC
Confidence            99999765 3578999999   8899999999999998875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.98  E-value=1.3e-31  Score=245.48  Aligned_cols=231  Identities=15%  Similarity=0.127  Sum_probs=177.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-----hhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-----SKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-----~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      +|+||||||+||||++|+++|+++++|++|++++|+..     ....+ ..+++++.+|++|++.+.++++++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            57899999999999999999999855799999999652     12222 2458899999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC--------------CCC
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN--------------HPL  221 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~--------------~~~  221 (331)
                      |.....      ....+++..       .++|+.++.+++++|++.++ +||++||..++...              .+.
T Consensus        84 ~~~~~~------~~~~~~~~~-------~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~  149 (348)
T 1oc2_A           84 AESHND------NSLNDPSPF-------IHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKF  149 (348)
T ss_dssp             SCCCHH------HHHHCCHHH-------HHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSB
T ss_pred             cccCcc------chhhCHHHH-------HHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCc
Confidence            963210      011233333       38899999999999999988 99999998654221              111


Q ss_pred             ----CCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc--------hhhhhccCCccccC---CcccccC
Q 046297          222 ----NSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQ---TETRTIA  282 (331)
Q Consensus       222 ----~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~---~~~~~i~  282 (331)
                          +..+.+.|+.+|..+|.+++.    .+++++++||+++||+...        ......+....+++   ..++++|
T Consensus       150 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  229 (348)
T 1oc2_A          150 TAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIH  229 (348)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEE
Confidence                111236799999999988764    5899999999999998753        12223344433322   3478999


Q ss_pred             HHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          283 RADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++|+|++++.+++.+ ..|++||+++   ++.+++.|+++.+.+.+|+
T Consensus       230 v~Dva~~~~~~~~~~-~~g~~~~i~~---~~~~s~~e~~~~i~~~~g~  273 (348)
T 1oc2_A          230 TNDHSTGVWAILTKG-RMGETYLIGA---DGEKNNKEVLELILEKMGQ  273 (348)
T ss_dssp             HHHHHHHHHHHHHHC-CTTCEEEECC---SCEEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhhCC-CCCCeEEeCC---CCCCCHHHHHHHHHHHhCC
Confidence            999999999999765 3578999999   8899999999999998874

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.98  E-value=1.9e-31  Score=243.41  Aligned_cols=229  Identities=16%  Similarity=0.160  Sum_probs=177.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhc-CCC---CeEEEEecCCc-----hhhhcC--CCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKER-SEQ---YAARGLVRTEE-----SKQKIG--GADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~-~~g---~~V~~l~R~~~-----~~~~l~--~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      |+||||||+||||++|+++|+++ ++|   ++|++++|+..     ....+.  .+++++.+|++|++.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            57999999999999999999994 556   99999999642     222232  35789999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNS  223 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~  223 (331)
                      ||+||.....      ....+++..+       ++|+.++.+++++|++.++++||++||..++..        ..+.. 
T Consensus        81 ih~A~~~~~~------~~~~~~~~~~-------~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-  146 (337)
T 1r6d_A           81 VHFAAESHVD------RSIAGASVFT-------ETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLE-  146 (337)
T ss_dssp             EECCSCCCHH------HHHHCCHHHH-------HHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCC-
T ss_pred             EECCCccCch------hhhhCHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCC-
Confidence            9999863210      0012333333       889999999999999999999999999765422        22222 


Q ss_pred             CCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc--------hhhhhccCCccccC---CcccccCHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQ---TETRTIARADVAE  288 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~---~~~~~i~v~Dva~  288 (331)
                       +.+.|+.+|..+|.+++    +.+++++++||+++||+...        ......+....+++   ..++++|++|+|+
T Consensus       147 -~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  225 (337)
T 1r6d_A          147 -PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR  225 (337)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHH
Confidence             23679999999998876    36899999999999998752        12223344333332   3368999999999


Q ss_pred             HHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          289 VCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       289 ~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++.+++++. .+++||+++   ++.+++.|+++.+.+.+|+
T Consensus       226 a~~~~~~~~~-~g~~~~v~~---~~~~s~~e~~~~i~~~~g~  263 (337)
T 1r6d_A          226 GIALVLAGGR-AGEIYHIGG---GLELTNRELTGILLDSLGA  263 (337)
T ss_dssp             HHHHHHHHCC-TTCEEEECC---CCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHhCCC-CCCEEEeCC---CCCccHHHHHHHHHHHhCC
Confidence            9999997653 578999999   8899999999999998875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.98  E-value=8.5e-32  Score=247.65  Aligned_cols=235  Identities=16%  Similarity=0.126  Sum_probs=177.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhcC--CCEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQG--IDAL  151 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~~--~d~V  151 (331)
                      +.+|+||||||+||||++|+++|+++  |++|++++|++++...+      ..+++++.+|+.|++.+.+++++  +|+|
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            34689999999999999999999999  99999999987554322      34688999999999999999986  8999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCCC---CC----CC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLNH---PL----NS  223 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~~---~~----~~  223 (331)
                      ||+||....      .....+++.       ..++|+.++.+++++|++.+ +++||++||..++....   +.    ..
T Consensus        85 ih~A~~~~~------~~~~~~~~~-------~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~  151 (357)
T 1rkx_A           85 FHMAAQPLV------RLSYSEPVE-------TYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM  151 (357)
T ss_dssp             EECCSCCCH------HHHHHCHHH-------HHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             EECCCCccc------ccchhCHHH-------HHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCC
Confidence            999985211      000112223       33889999999999999887 89999999987543221   11    11


Q ss_pred             CCcchHHHHHHHHHHHHHhc-------------CCCEEEEecCcccCCCcc----h-----hhhhccCCcccc--CCccc
Q 046297          224 LGNGNILVWKRKAEQYLADS-------------GIPYTIIRAGGLQDKEGG----I-----RELLVGKDDELL--QTETR  279 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~~~-------------~~~~~ilrp~~v~g~~~~----~-----~~~~~~~~~~~~--~~~~~  279 (331)
                      .+.+.|+.+|..+|++++..             +++++++||+++||+...    +     .....+....+.  +..++
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  231 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRP  231 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEEC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeec
Confidence            22367999999999887642             899999999999998652    1     122234443343  24478


Q ss_pred             ccCHHHHHHHHHHHhcC----cccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          280 TIARADVAEVCIQALQF----EEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~----~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++|++|+|++++.+++.    +...+++||++++. ++.+|+.|+++.+.+++|+
T Consensus       232 ~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~-~~~~s~~e~~~~i~~~~g~  285 (357)
T 1rkx_A          232 WQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPND-ADATPVKNIVEQMVKYWGE  285 (357)
T ss_dssp             CEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCG-GGCEEHHHHHHHHHHHHCT
T ss_pred             cEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCC-CCcccHHHHHHHHHHHhCC
Confidence            99999999999999874    23456799999610 2579999999999998874

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.98  E-value=1.6e-31  Score=244.33  Aligned_cols=230  Identities=13%  Similarity=0.129  Sum_probs=176.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCc-ccHHHHhcCCCEEEEcccCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDS-NSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~-~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      |+||||||+||||++++++|++++ |++|++++|++++...+.  .+++++.+|+.|. +.+.++++++|+|||+||...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~   79 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccC
Confidence            579999999999999999999963 799999999987655442  3588999999985 568888999999999998632


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CCC---------C--CCc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PLN---------S--LGN  226 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~~---------~--~~~  226 (331)
                      ..      ....+++.       ..++|+.++.+++++|++.+ ++||++||.+++....  +..         +  ...
T Consensus        80 ~~------~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~  145 (345)
T 2bll_A           80 PI------EYTRNPLR-------VFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPR  145 (345)
T ss_dssp             HH------HHHHSHHH-------HHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGG
T ss_pred             cc------chhcCHHH-------HHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcc
Confidence            10      00012222       33789999999999999998 8999999986543211  110         1  112


Q ss_pred             chHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------------hhhhhccCCccccC---CcccccCH
Q 046297          227 GNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------------IRELLVGKDDELLQ---TETRTIAR  283 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------------~~~~~~~~~~~~~~---~~~~~i~v  283 (331)
                      +.|+.+|..+|.+++    +.+++++++||+++||+...                ......+....+++   ..++++|+
T Consensus       146 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  225 (345)
T 2bll_A          146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  225 (345)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred             cccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEH
Confidence            479999999998875    46899999999999998742                11223444443432   34689999


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEeccCCCCC-CCCHHHHHHHHHHhhcc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLASKPEGT-GTPTKDFKALFSQITTR  330 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~-~~t~~e~~~~~~~~~g~  330 (331)
                      +|+|++++.+++++.  ..+++||+++   ++ .+|+.|+++.+.+.+|+
T Consensus       226 ~Dva~a~~~~~~~~~~~~~g~~~~i~~---~~~~~s~~e~~~~i~~~~g~  272 (345)
T 2bll_A          226 RDGIEALYRIIENAGNRCDGEIINIGN---PENEASIEELGEMLLASFEK  272 (345)
T ss_dssp             HHHHHHHHHHHHCGGGTTTTEEEEECC---TTSEEEHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhhccccCCCceEEeCC---CCCCCCHHHHHHHHHHHhCC
Confidence            999999999998764  4678999998   75 79999999999998874

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.98  E-value=4.6e-32  Score=241.95  Aligned_cols=213  Identities=15%  Similarity=0.172  Sum_probs=170.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~  160 (331)
                      |+||||||+||||+++++.|+++  ||+|++++|.              ++|+.|.+.+.++++  ++|+|||+|+....
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~--------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~   69 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPE--EYDIYPFDKK--------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKV   69 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTT--------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhC--CCEEEEeccc--------------ccCCCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            48999999999999999999999  9999999993              389999999999998  79999999997432


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC----CCCCcchHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL----NSLGNGNILVWKR  234 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~----~~~~~~~y~~sK~  234 (331)
                      .      ....+++..+       ++|+.++.+++++|++.++ +|||+||..++....  +.    ...+.+.|+.+|.
T Consensus        70 ~------~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~  135 (287)
T 3sc6_A           70 D------QAEKERDLAY-------VINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKY  135 (287)
T ss_dssp             H------HHTTCHHHHH-------HHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHH
T ss_pred             H------HHhcCHHHHH-------HHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence            1      1112334444       8899999999999999998 799999986653321  11    1122367999999


Q ss_pred             HHHHHHHhcCCCEEEEecCcccCCCcc-h-----hhhhccCCcccc-CCcccccCHHHHHHHHHHHhcCcccCCceEEec
Q 046297          235 KAEQYLADSGIPYTIIRAGGLQDKEGG-I-----RELLVGKDDELL-QTETRTIARADVAEVCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       235 ~~e~~~~~~~~~~~ilrp~~v~g~~~~-~-----~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~  307 (331)
                      .+|++++.+..+++++||+++||+... +     .....+....+. +..++++|++|+|++++.+++++.  +++||++
T Consensus       136 ~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~  213 (287)
T 3sc6_A          136 AGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL--YGTYHVS  213 (287)
T ss_dssp             HHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC--CEEEECC
T ss_pred             HHHHHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC--CCeEEEc
Confidence            999999998889999999999998643 1     111223333333 345789999999999999999876  6699999


Q ss_pred             cCCCCCCCCHHHHHHHHHHhhcc
Q 046297          308 SKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       308 ~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +   ++.+++.|+++.+.+.+|+
T Consensus       214 ~---~~~~s~~e~~~~i~~~~g~  233 (287)
T 3sc6_A          214 N---TGSCSWFEFAKKIFSYANM  233 (287)
T ss_dssp             C---BSCEEHHHHHHHHHHHHTC
T ss_pred             C---CCcccHHHHHHHHHHHcCC
Confidence            9   8899999999999999874

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.97  E-value=2.1e-31  Score=240.73  Aligned_cols=221  Identities=16%  Similarity=0.118  Sum_probs=152.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC--CCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG--IDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~ag~~~  159 (331)
                      +|+||||||+||||++|+++|+++  |++|++++|+.+.     ++  ++.+|++|++.+.+++++  +|+|||+||...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~-----~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   72 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRAR-----PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR   72 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC-------------------------CHHHHHHHCCSEEEECC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCC-----CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence            478999999999999999999999  9999999997644     12  788999999999999884  999999999643


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC-------CCCCCCCCcchHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL-------NHPLNSLGNGNILVW  232 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~-------~~~~~~~~~~~y~~s  232 (331)
                      ..      ....+++..       .++|+.++.+++++|++.++ +||++||..++..       ..+..  +.+.|+.+
T Consensus        73 ~~------~~~~~~~~~-------~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~--~~~~Y~~s  136 (315)
T 2ydy_A           73 PD------VVENQPDAA-------SQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPA--PLNLYGKT  136 (315)
T ss_dssp             ----------------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCC--CCSHHHHH
T ss_pred             hh------hhhcCHHHH-------HHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCC--CcCHHHHH
Confidence            21      112333333       48999999999999999887 9999999876543       22222  23679999


Q ss_pred             HHHHHHHHHhcCCCEEEEecCcccCCCcc--------hhhhh--ccCCcccc-CCcccccCHHHHHHHHHHHhcCc---c
Q 046297          233 KRKAEQYLADSGIPYTIIRAGGLQDKEGG--------IRELL--VGKDDELL-QTETRTIARADVAEVCIQALQFE---E  298 (331)
Q Consensus       233 K~~~e~~~~~~~~~~~ilrp~~v~g~~~~--------~~~~~--~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~~---~  298 (331)
                      |..+|++++..+++++++||+++||+...        +...+  .+....+. +..+++++++|+|++++.+++++   .
T Consensus       137 K~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~  216 (315)
T 2ydy_A          137 KLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDP  216 (315)
T ss_dssp             HHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhcccc
Confidence            99999999999999999999999998653        11111  23322222 34578899999999999998764   3


Q ss_pred             cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          299 AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       299 ~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ..+++||+++   ++.+++.|+++.+.+++|+
T Consensus       217 ~~~~~~~i~~---~~~~s~~e~~~~i~~~~g~  245 (315)
T 2ydy_A          217 SIKGTFHWSG---NEQMTKYEMACAIADAFNL  245 (315)
T ss_dssp             TCCEEEECCC---SCCBCHHHHHHHHHHHTTC
T ss_pred             CCCCeEEEcC---CCcccHHHHHHHHHHHhCC
Confidence            4578999999   8999999999999998874

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-31  Score=244.49  Aligned_cols=228  Identities=20%  Similarity=0.182  Sum_probs=175.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-----hhc--CCCCcEEEccCCCcccHHHHhcC--CCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-----QKI--GGADDLFIGDIRDSNSIIPAIQG--IDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-----~~l--~~~~~~v~~Dl~d~~~~~~~l~~--~d~V  151 (331)
                      .+++||||||+||||++|++.|+++  |++|++++|++++.     ..+  ..+++++.+|+.|++.+.+++++  +|+|
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            3688999999999999999999999  99999999986541     222  23478899999999999999985  6999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC-CeEEEEccCCCCCC--------CCCCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA-KQIVLVGSMGGTNL--------NHPLN  222 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-k~~v~~SS~~~~~~--------~~~~~  222 (331)
                      ||+||.....      ....+++..+       ++|+.++.+++++|++.++ ++||++||.+++..        ..+..
T Consensus        91 ih~A~~~~~~------~~~~~~~~~~-------~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           91 YNLAAQSFVG------ASWNQPVTTG-------VVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             EECCSCCCHH------HHTTSHHHHH-------HHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             EECccccchh------hhhhChHHHH-------HHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            9999963210      0122333333       8899999999999999996 89999999865432        22222


Q ss_pred             CCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc-------hh----hhhccCCcc-cc---CCcccccCH
Q 046297          223 SLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG-------IR----ELLVGKDDE-LL---QTETRTIAR  283 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~-------~~----~~~~~~~~~-~~---~~~~~~i~v  283 (331)
                        +.+.|+.+|..+|.+++.    ++++++++||+++||+...       +.    ....+.... ..   +..++++|+
T Consensus       158 --p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v  235 (335)
T 1rpn_A          158 --PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA  235 (335)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred             --CCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEH
Confidence              236799999999988764    5899999999999998632       11    122343222 22   234789999


Q ss_pred             HHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          284 ADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +|+|++++.+++++.  +++||+++   ++.+|+.|+++.+.+++|+
T Consensus       236 ~Dva~a~~~~~~~~~--~~~~ni~~---~~~~s~~e~~~~i~~~~g~  277 (335)
T 1rpn_A          236 GDYVEAMWLMLQQDK--ADDYVVAT---GVTTTVRDMCQIAFEHVGL  277 (335)
T ss_dssp             HHHHHHHHHHHHSSS--CCCEEECC---SCEEEHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHhcCC--CCEEEEeC---CCCccHHHHHHHHHHHhCC
Confidence            999999999998764  36999998   8899999999999998874

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.97  E-value=1.1e-31  Score=245.51  Aligned_cols=231  Identities=15%  Similarity=0.121  Sum_probs=174.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-h----hhhc--CCCCcEEEccCCCcccHHHHhcC--CCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-S----KQKI--GGADDLFIGDIRDSNSIIPAIQG--IDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~----~~~l--~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi  152 (331)
                      ||+||||||+||||++|+++|+++  |++|++++|+.. .    ...+  ..+++++.+|++|++.+.+++++  +|+||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCF   78 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEE
Confidence            468999999999999999999999  999999998531 1    1122  13488999999999999999987  99999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCCCCCCC-----------
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGTNLNHP-----------  220 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~~~~~~-----------  220 (331)
                      |+||.....      ....+++..       .++|+.++.+++++|++.+++ +||++||.+++.....           
T Consensus        79 h~A~~~~~~------~~~~~~~~~-------~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~  145 (347)
T 1orr_A           79 HLAGQVAMT------TSIDNPCMD-------FEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYT  145 (347)
T ss_dssp             ECCCCCCHH------HHHHCHHHH-------HHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEE
T ss_pred             ECCcccChh------hhhhCHHHH-------HHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCccccccccc
Confidence            999963210      001123333       388999999999999999986 9999999875432110           


Q ss_pred             -----------CCCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc-------h----hhhhccC-----
Q 046297          221 -----------LNSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG-------I----RELLVGK-----  269 (331)
Q Consensus       221 -----------~~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~-------~----~~~~~~~-----  269 (331)
                                 ....+.+.|+.+|..+|.+++.    .+++++++||+++||+...       +    .....+.     
T Consensus       146 ~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (347)
T 1orr_A          146 CVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINK  225 (347)
T ss_dssp             ETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCC
T ss_pred             ccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCC
Confidence                       0111336899999999998874    4899999999999998632       1    1222232     


Q ss_pred             CccccC---CcccccCHHHHHHHHHHHhcC-cccCCceEEeccCCCCC--CCCHHHHHHHHHHhhcc
Q 046297          270 DDELLQ---TETRTIARADVAEVCIQALQF-EEAKFKAFDLASKPEGT--GTPTKDFKALFSQITTR  330 (331)
Q Consensus       270 ~~~~~~---~~~~~i~v~Dva~~~~~~l~~-~~~~~~~~~i~~~~~~~--~~t~~e~~~~~~~~~g~  330 (331)
                      ...+++   ..+++++++|+|++++.++++ +...|++||+++   +.  .+|+.|+++.+.+++|+
T Consensus       226 ~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~---~~~~~~s~~e~~~~i~~~~g~  289 (347)
T 1orr_A          226 PFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGG---TIVNSLSLLELFKLLEDYCNI  289 (347)
T ss_dssp             CEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESS---CGGGEEEHHHHHHHHHHHHTC
T ss_pred             CeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCC---CCCCCccHHHHHHHHHHHhCC
Confidence            222222   347899999999999999986 335678999998   65  49999999999999874

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=2e-31  Score=244.11  Aligned_cols=230  Identities=18%  Similarity=0.186  Sum_probs=174.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----------hhhc----CCCCcEEEccCCCcccHHHHhc-
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----------KQKI----GGADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----------~~~l----~~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      +|+||||||+||||++|+++|+++  |++|++++|+...          .+.+    ..+++++.+|++|++.+.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence            478999999999999999999999  9999999986432          1112    2468899999999999999998 


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------  217 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------  217 (331)
                       ++|+|||+||.....      ....+++..       .++|+.++.+++++|++.++++||++||..++..        
T Consensus        80 ~~~d~vih~A~~~~~~------~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E  146 (348)
T 1ek6_A           80 YSFMAVIHFAGLKAVG------ESVQKPLDY-------YRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDE  146 (348)
T ss_dssp             CCEEEEEECCSCCCHH------HHHHCHHHH-------HHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             cCCCEEEECCCCcCcc------chhhchHHH-------HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCC
Confidence             899999999963210      001122333       3889999999999999999999999999876532        


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHhc---C--CCEEEEecCcccCCCc-------------chh----hhhc--cCCccc
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLADS---G--IPYTIIRAGGLQDKEG-------------GIR----ELLV--GKDDEL  273 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~~~---~--~~~~ilrp~~v~g~~~-------------~~~----~~~~--~~~~~~  273 (331)
                      +.+..+ ..+.|+.+|..+|.+++..   +  ++++++||+++||+..             .+.    ....  +....+
T Consensus       147 ~~~~~p-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (348)
T 1ek6_A          147 AHPTGG-CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (348)
T ss_dssp             TSCCCC-CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             CCCCCC-CCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEE
Confidence            222222 1367999999999988642   4  9999999999999842             111    1122  222222


Q ss_pred             c---------CCcccccCHHHHHHHHHHHhcCcc-cCC-ceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          274 L---------QTETRTIARADVAEVCIQALQFEE-AKF-KAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       274 ~---------~~~~~~i~v~Dva~~~~~~l~~~~-~~~-~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +         ...++++|++|+|++++.+++++. ..+ ++||+++   ++.+++.|+++.+.+++|+
T Consensus       226 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~---~~~~s~~e~~~~i~~~~g~  290 (348)
T 1ek6_A          226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT---GTGYSVLQMVQAMEKASGK  290 (348)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC---SCCEEHHHHHHHHHHHHCS
T ss_pred             eCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCC---CCCccHHHHHHHHHHHhCC
Confidence            1         234789999999999999998753 334 8999998   8899999999999998874

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.97  E-value=5.5e-31  Score=240.14  Aligned_cols=225  Identities=17%  Similarity=0.204  Sum_probs=176.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhcC--CCCcEEEccCCCcccHHHHhcC--CCEEEEc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKIG--GADDLFIGDIRDSNSIIPAIQG--IDALIIL  154 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l~--~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~  154 (331)
                      ..+|+||||||+||||++|+++|+++  |++|++++|+.... +.+.  .+++++.+|+.|++.+.+++++  +|+|||+
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~   96 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHT   96 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEEC
Confidence            34678999999999999999999999  99999999986432 2232  3578999999999999999987  9999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC----CCC-CCCC--CCc-
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN----LNH-PLNS--LGN-  226 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~----~~~-~~~~--~~~-  226 (331)
                      ||.....       ...+++         .++|+.++.+++++|++.++++||++||.+++.    ... +...  .+. 
T Consensus        97 A~~~~~~-------~~~~~~---------~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~  160 (333)
T 2q1w_A           97 AASYKDP-------DDWYND---------TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPAN  160 (333)
T ss_dssp             CCCCSCT-------TCHHHH---------HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTT
T ss_pred             ceecCCC-------ccCChH---------HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCC
Confidence            9964321       111111         478999999999999999999999999987654    211 1100  223 


Q ss_pred             chHHHHHHHHHHHHHh-cCCCEEEEecCcccCCCc--ch-----hhhhccCCcccc--CCcccccCHHHHHHHHHHHhcC
Q 046297          227 GNILVWKRKAEQYLAD-SGIPYTIIRAGGLQDKEG--GI-----RELLVGKDDELL--QTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~~-~~~~~~ilrp~~v~g~~~--~~-----~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                      +.|+.+|..+|.+++. .. +++++||+++||+..  .+     .....+.  .++  ...+++++++|+|++++.++++
T Consensus       161 ~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~v~Dva~ai~~~~~~  237 (333)
T 2q1w_A          161 SSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFVTKARRDFVFVKDLARATVRAVDG  237 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEEEECEECEEEHHHHHHHHHHHHTT
T ss_pred             CchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeCCCceEeeEEHHHHHHHHHHHHhc
Confidence            5799999999999998 77 999999999999873  11     1222333  222  2347889999999999999987


Q ss_pred             cccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          297 EEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       297 ~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +.  +++||+++   ++.+++.|+++.+.+++|+
T Consensus       238 ~~--g~~~~v~~---~~~~s~~e~~~~i~~~~g~  266 (333)
T 2q1w_A          238 VG--HGAYHFSS---GTDVAIKELYDAVVEAMAL  266 (333)
T ss_dssp             CC--CEEEECSC---SCCEEHHHHHHHHHHHTTC
T ss_pred             CC--CCEEEeCC---CCCccHHHHHHHHHHHhCC
Confidence            75  78999998   8999999999999998874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=4.1e-31  Score=235.47  Aligned_cols=211  Identities=23%  Similarity=0.270  Sum_probs=169.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMK  162 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~  162 (331)
                      +||||||+|+||++++++|+++.+|++|++++|++++...+ ..+++++.+|+.|++.+.++++++|+|||+++...   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~---   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV---   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc---
Confidence            48999999999999999999874489999999987765443 24688999999999999999999999999998410   


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHh
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLAD  242 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  242 (331)
                                            ..|+.++.+++++|++.++++||++||.+++.  .+      ..|+.+|..+|+++++
T Consensus        78 ----------------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--~~------~~y~~sK~~~e~~~~~  127 (286)
T 2zcu_A           78 ----------------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--SP------LGLADEHIETEKMLAD  127 (286)
T ss_dssp             --------------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--CC------STTHHHHHHHHHHHHH
T ss_pred             ----------------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--Cc------chhHHHHHHHHHHHHH
Confidence                                  23677899999999999999999999998752  11      3599999999999999


Q ss_pred             cCCCEEEEecCcccCCCcc-hhhhhccCCcccc--CCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHH
Q 046297          243 SGIPYTIIRAGGLQDKEGG-IRELLVGKDDELL--QTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKD  319 (331)
Q Consensus       243 ~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e  319 (331)
                      .+++++++||++++++... +.....+....+.  +..+++++++|+|++++.++.++...+++||+++   ++.+|+.|
T Consensus       128 ~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~---~~~~s~~e  204 (286)
T 2zcu_A          128 SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAG---DSAWTLTQ  204 (286)
T ss_dssp             HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECC---SSCBCHHH
T ss_pred             cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeC---CCcCCHHH
Confidence            9999999999987765322 2222222222222  3457899999999999999988766788999998   88999999


Q ss_pred             HHHHHHHhhcc
Q 046297          320 FKALFSQITTR  330 (331)
Q Consensus       320 ~~~~~~~~~g~  330 (331)
                      +++.+.+++|+
T Consensus       205 ~~~~i~~~~g~  215 (286)
T 2zcu_A          205 LAAELTKQSGK  215 (286)
T ss_dssp             HHHHHHHHHSS
T ss_pred             HHHHHHHHHCC
Confidence            99999999874

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=2.7e-31  Score=247.61  Aligned_cols=231  Identities=17%  Similarity=0.191  Sum_probs=174.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHH-hcCCCCeEEEEecCCch---------hhhc------------CCC---CcEEEccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLK-ERSEQYAARGLVRTEES---------KQKI------------GGA---DDLFIGDIR  136 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll-~~~~g~~V~~l~R~~~~---------~~~l------------~~~---~~~v~~Dl~  136 (331)
                      .|+||||||+||||++|+++|+ ++  |++|++++|+...         .+.+            ..+   ++++.+|++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   79 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence            3689999999999999999999 98  9999999997543         2222            124   889999999


Q ss_pred             CcccHHHHhc--C-CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          137 DSNSIIPAIQ--G-IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       137 d~~~~~~~l~--~-~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      |++.+.++++  + +|+|||+||.....      ....+++..       +++|+.++.+++++|++.++++||++||.+
T Consensus        80 d~~~~~~~~~~~~~~d~vih~A~~~~~~------~~~~~~~~~-------~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~  146 (397)
T 1gy8_A           80 NEDFLNGVFTRHGPIDAVVHMCAFLAVG------ESVRDPLKY-------YDNNVVGILRLLQAMLLHKCDKIIFSSSAA  146 (397)
T ss_dssp             CHHHHHHHHHHSCCCCEEEECCCCCCHH------HHHHCHHHH-------HHHHHHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred             CHHHHHHHHHhcCCCCEEEECCCccCcC------cchhhHHHH-------HHHHhHHHHHHHHHHHHhCCCEEEEECCHH
Confidence            9999999997  6 99999999964220      001122333       388999999999999999999999999987


Q ss_pred             CCCCCC---------CCC----CCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCc------------chh-
Q 046297          214 GTNLNH---------PLN----SLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEG------------GIR-  263 (331)
Q Consensus       214 ~~~~~~---------~~~----~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~------------~~~-  263 (331)
                      ++....         +..    ..+.+.|+.+|..+|.+++.    ++++++++||+++||+..            .+. 
T Consensus       147 v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~  226 (397)
T 1gy8_A          147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIP  226 (397)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHH
T ss_pred             HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHH
Confidence            643221         111    11236799999999988764    599999999999999852            111 


Q ss_pred             --------hhhccCC------------cccc---------CCcccccCHHHHHHHHHHHhcCcccC-----C---ceEEe
Q 046297          264 --------ELLVGKD------------DELL---------QTETRTIARADVAEVCIQALQFEEAK-----F---KAFDL  306 (331)
Q Consensus       264 --------~~~~~~~------------~~~~---------~~~~~~i~v~Dva~~~~~~l~~~~~~-----~---~~~~i  306 (331)
                              ....+..            ..++         ...+++||++|+|++++.+++.+...     +   ++||+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni  306 (397)
T 1gy8_A          227 IILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNL  306 (397)
T ss_dssp             HHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEE
T ss_pred             HHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEe
Confidence                    2223322            1222         23478999999999999999865432     3   79999


Q ss_pred             ccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          307 ASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       307 ~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++   ++.+++.|+++.+.+++|+
T Consensus       307 ~~---~~~~s~~e~~~~i~~~~g~  327 (397)
T 1gy8_A          307 GT---SRGYSVREVIEVARKTTGH  327 (397)
T ss_dssp             SC---SCCEEHHHHHHHHHHHHCC
T ss_pred             CC---CCcccHHHHHHHHHHHhCC
Confidence            98   8899999999999998874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=7.6e-31  Score=225.51  Aligned_cols=201  Identities=10%  Similarity=0.049  Sum_probs=157.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+||||||+|+||++++++|+++  |++|++++|++++...+ ..+++++.+|++|++.  ++++++|+|||+||.... 
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWG-   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTT-
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCC-
Confidence            57999999999999999999999  99999999998876664 3469999999999987  788999999999996311 


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC---------CCCCCcchHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP---------LNSLGNGNILVW  232 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~---------~~~~~~~~y~~s  232 (331)
                                         ....+.|+.++++++++|++.+ ++||++||.+++.....         ..+...+.|+.+
T Consensus        76 -------------------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s  135 (224)
T 3h2s_A           76 -------------------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGA  135 (224)
T ss_dssp             -------------------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHH
T ss_pred             -------------------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHH
Confidence                               0112679999999999999999 99999999754322111         111113569999


Q ss_pred             HHHHHHH--H-HhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          233 KRKAEQY--L-ADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       233 K~~~e~~--~-~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      |..+|.+  + ++.+++|+++||+++||+................+...++++++|+|++++.+++++...+++|++++
T Consensus       136 K~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~  214 (224)
T 3h2s_A          136 LYQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRD  214 (224)
T ss_dssp             HHHHHHHHHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEE
T ss_pred             HHHHHHHHHHHhcCCCcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEec
Confidence            9999864  2 35799999999999999844322111122222334567899999999999999999988899999998

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=9.4e-31  Score=233.76  Aligned_cols=213  Identities=22%  Similarity=0.247  Sum_probs=171.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+||||||||+||+++++.|++++ |++|++++|++++...+ ..+++++.+|+.|++++.++++++|+|||+++.... 
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~-g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANH-IDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTT-CTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS-
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCC-CCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc-
Confidence            579999999999999999988753 89999999998776654 356999999999999999999999999999985322 


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA  241 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  241 (331)
                                            ...|+.++++++++|++.|+++||++||.+. .+..+.   .   +...+..+|+.++
T Consensus        79 ----------------------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~-~~~~~~---~---~~~~~~~~e~~~~  129 (289)
T 3e48_A           79 ----------------------SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD-QHNNPF---H---MSPYFGYASRLLS  129 (289)
T ss_dssp             ----------------------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC-STTCCS---T---THHHHHHHHHHHH
T ss_pred             ----------------------chhhHHHHHHHHHHHHHcCCCEEEEEcccCC-CCCCCC---c---cchhHHHHHHHHH
Confidence                                  1347899999999999999999999999764 222222   1   2234557888888


Q ss_pred             hcCCCEEEEecCcccCCCcchh-hhhccCCcccc--CCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHH
Q 046297          242 DSGIPYTIIRAGGLQDKEGGIR-ELLVGKDDELL--QTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTK  318 (331)
Q Consensus       242 ~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~  318 (331)
                      +.+++|+++||++++|+..... ....+.....+  +..+++++++|+|++++.++.++...+++|+++    ++.+|+.
T Consensus       130 ~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~----~~~~s~~  205 (289)
T 3e48_A          130 TSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS----GYSYDMK  205 (289)
T ss_dssp             HHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC----CEEEEHH
T ss_pred             HcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC----CCcCCHH
Confidence            9999999999999999854322 22222222222  445789999999999999999887668899999    3779999


Q ss_pred             HHHHHHHHhhcc
Q 046297          319 DFKALFSQITTR  330 (331)
Q Consensus       319 e~~~~~~~~~g~  330 (331)
                      |+++.+++++|+
T Consensus       206 e~~~~~~~~~g~  217 (289)
T 3e48_A          206 ELAAILSEASGT  217 (289)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHCC
Confidence            999999999885

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.97  E-value=4.2e-31  Score=246.85  Aligned_cols=230  Identities=17%  Similarity=0.165  Sum_probs=172.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh-----------------h-------cCCCCcEEEccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-----------------K-------IGGADDLFIGDIRD  137 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-----------------~-------l~~~~~~v~~Dl~d  137 (331)
                      +++||||||+||||++|+++|+++  |++|++++|......                 .       ...+++++.+|++|
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            678999999999999999999999  999999998643210                 1       13468899999999


Q ss_pred             cccHHHHhcC--CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC-CeEEEEccCCC
Q 046297          138 SNSIIPAIQG--IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA-KQIVLVGSMGG  214 (331)
Q Consensus       138 ~~~~~~~l~~--~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-k~~v~~SS~~~  214 (331)
                      ++.+.+++++  +|+|||+||.....      ....+|+.    .....++|+.++.+++++|++.++ ++||++||.++
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~------~~~~~~~~----~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~v  158 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAP------YSMIDRSR----AVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE  158 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHH------HHTSCHHH----HHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCcc------chhhCccc----hhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHH
Confidence            9999999987  99999999963221      00112211    001237899999999999999988 59999999866


Q ss_pred             CCCCC-C------------------CCCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc----------
Q 046297          215 TNLNH-P------------------LNSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG----------  261 (331)
Q Consensus       215 ~~~~~-~------------------~~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~----------  261 (331)
                      +.... +                  ....+.+.|+.+|..+|.+++.    ++++++++||+++||+...          
T Consensus       159 yg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~  238 (404)
T 1i24_A          159 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN  238 (404)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred             hCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccc
Confidence            43221 1                  1112236799999999987764    4999999999999998641          


Q ss_pred             ---------------hhhhhccCCccccC---CcccccCHHHHHHHHHHHhcCcccCC--ceEEeccCCCCCCCCHHHHH
Q 046297          262 ---------------IRELLVGKDDELLQ---TETRTIARADVAEVCIQALQFEEAKF--KAFDLASKPEGTGTPTKDFK  321 (331)
Q Consensus       262 ---------------~~~~~~~~~~~~~~---~~~~~i~v~Dva~~~~~~l~~~~~~~--~~~~i~~~~~~~~~t~~e~~  321 (331)
                                     ......+....+.+   ..++++|++|+|++++.+++++...+  ++||+++    +.+++.|++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~----~~~s~~e~~  314 (404)
T 1i24_A          239 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT----EQFSVNELA  314 (404)
T ss_dssp             CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS----EEEEHHHHH
T ss_pred             ccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC----CCCcHHHHH
Confidence                           11223344433332   34789999999999999998876555  7999985    469999999


Q ss_pred             HHHHHh
Q 046297          322 ALFSQI  327 (331)
Q Consensus       322 ~~~~~~  327 (331)
                      +.+.++
T Consensus       315 ~~i~~~  320 (404)
T 1i24_A          315 SLVTKA  320 (404)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999987

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=1.1e-30  Score=239.32  Aligned_cols=216  Identities=18%  Similarity=0.222  Sum_probs=170.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC----chhh---hc-CCCCcEEEccCCCcccHHHHhc--CCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE----ESKQ---KI-GGADDLFIGDIRDSNSIIPAIQ--GID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~----~~~~---~l-~~~~~~v~~Dl~d~~~~~~~l~--~~d  149 (331)
                      |.+++||||||||+||++|++.|+++  |++|++++|++    ++..   .+ ..+++++.+|+.|.+++.++++  ++|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d   85 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEID   85 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCC
Confidence            44678999999999999999999999  99999999987    2222   12 3569999999999999999999  999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCC-CCCCCCCCCCcc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGT-NLNHPLNSLGNG  227 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~-~~~~~~~~~~~~  227 (331)
                      +|||+++.                            .|+.++.+++++|++.| +++||+ |+.+.. ++..+..  +.+
T Consensus        86 ~Vi~~a~~----------------------------~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~--p~~  134 (346)
T 3i6i_A           86 IVVSTVGG----------------------------ESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVE--PGL  134 (346)
T ss_dssp             EEEECCCG----------------------------GGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCT--THH
T ss_pred             EEEECCch----------------------------hhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCC--Ccc
Confidence            99999984                            27788999999999999 999987 554432 2233322  236


Q ss_pred             hHHHHHHHHHHHHHhcCCCEEEEecCcccCCCcc-hhh-h---hccCCcccc---CCcccccCHHHHHHHHHHHhcCccc
Q 046297          228 NILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG-IRE-L---LVGKDDELL---QTETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       228 ~y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~-~~~-~---~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                      .|+.+|+.+|+++++.+++++++|||+++|.... ... .   ..+....++   +..+++++++|+|++++.++.++..
T Consensus       135 ~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~  214 (346)
T 3i6i_A          135 NMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT  214 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG
T ss_pred             hHHHHHHHHHHHHHHcCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc
Confidence            7999999999999999999999999999997532 111 1   112222223   2357899999999999999999877


Q ss_pred             CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          300 KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       300 ~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .+++|++.++  ++.+|+.|+++++++++|+
T Consensus       215 ~~~~~~i~g~--~~~~s~~e~~~~~~~~~g~  243 (346)
T 3i6i_A          215 LNKSVHFRPS--CNCLNINELASVWEKKIGR  243 (346)
T ss_dssp             TTEEEECCCG--GGEECHHHHHHHHHHHHTS
T ss_pred             cCeEEEEeCC--CCCCCHHHHHHHHHHHHCC
Confidence            7889999841  5789999999999999885

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=3.8e-30  Score=217.97  Aligned_cols=199  Identities=19%  Similarity=0.204  Sum_probs=159.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      .|+|+||||+|+||++++++|+++  |++|++++|++++...+ ..+++++.+|+.|++.+.++++++|+|||++|....
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   80 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND   80 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC
Confidence            478999999999999999999999  99999999998765544 456899999999999999999999999999986321


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYL  240 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  240 (331)
                                .+          ..++|+.++.++++++++.++++||++||.+++...... +.....|+.+|..+|+++
T Consensus        81 ----------~~----------~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~y~~~K~~~e~~~  139 (206)
T 1hdo_A           81 ----------LS----------PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV-PPRLQAVTDDHIRMHKVL  139 (206)
T ss_dssp             ----------CS----------CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS-CGGGHHHHHHHHHHHHHH
T ss_pred             ----------CC----------ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc-cccchhHHHHHHHHHHHH
Confidence                      01          125799999999999999999999999999765433211 113367999999999999


Q ss_pred             HhcCCCEEEEecCcccCCCcchhhhhccCCccccCCc-ccccCHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          241 ADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTE-TRTIARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       241 ~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      ++.+++++++||+++...... ..+...    +.+.. .++++++|+|++++.+++++...|++|++++
T Consensus       140 ~~~~i~~~~lrp~~~~~~~~~-~~~~~~----~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  203 (206)
T 1hdo_A          140 RESGLKYVAVMPPHIGDQPLT-GAYTVT----LDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (206)
T ss_dssp             HHTCSEEEEECCSEEECCCCC-SCCEEE----SSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             HhCCCCEEEEeCCcccCCCCC-cceEec----ccCCCCCCccCHHHHHHHHHHHhcCccccccceeeec
Confidence            999999999999998432211 111100    11111 4789999999999999998877789999997

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.97  E-value=1e-30  Score=240.60  Aligned_cols=230  Identities=12%  Similarity=0.098  Sum_probs=175.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC--chhhhc-----CCCCcEEEccCCCcccHHHHhc--CCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE--ESKQKI-----GGADDLFIGDIRDSNSIIPAIQ--GIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~--~~~~~l-----~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~  153 (331)
                      |+||||||+||||++|+++|++++ |++|++++|+.  ...+.+     ..+++++.+|++|++.+.++++  ++|+|||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNT-QDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHC-SCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcC-CCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            479999999999999999999973 69999999965  222222     2357889999999999999998  9999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCC-------eEEEEccCCCCCCCC-----
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAK-------QIVLVGSMGGTNLNH-----  219 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk-------~~v~~SS~~~~~~~~-----  219 (331)
                      +||.....      ....+++..       .++|+.++.+++++|++.  +++       +||++||..++....     
T Consensus        80 ~A~~~~~~------~~~~~~~~~-------~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~  146 (361)
T 1kew_A           80 LAAESHVD------RSITGPAAF-------IETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEV  146 (361)
T ss_dssp             CCSCCCHH------HHHHCTHHH-------HHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS
T ss_pred             CCCCcChh------hhhhCHHHH-------HHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccc
Confidence            99963210      011233333       389999999999999998  888       999999976432211     


Q ss_pred             -------CC----CCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc--------hhhhhccCCccccC-
Q 046297          220 -------PL----NSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQ-  275 (331)
Q Consensus       220 -------~~----~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~-  275 (331)
                             +.    ...+.+.|+.+|..+|.+++.    .+++++++||+++||+...        ......+....+++ 
T Consensus       147 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T 1kew_A          147 ENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             CTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred             cccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCC
Confidence                   10    112236799999999988764    5999999999999999752        12223344433322 


Q ss_pred             --CcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          276 --TETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       276 --~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                        ..++++|++|+|++++.+++.+ ..|++||+++   ++.+++.|+++.+.+.+|+
T Consensus       227 ~~~~~~~i~v~Dva~a~~~~~~~~-~~g~~~~v~~---~~~~s~~e~~~~i~~~~g~  279 (361)
T 1kew_A          227 GDQIRDWLYVEDHARALHMVVTEG-KAGETYNIGG---HNEKKNLDVVFTICDLLDE  279 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHC-CTTCEEEECC---CCEEEHHHHHHHHHHHHHH
T ss_pred             CceeEeeEEHHHHHHHHHHHHhCC-CCCCEEEecC---CCeeeHHHHHHHHHHHhCC
Confidence              3368899999999999999765 4578999999   8889999999999998874

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.97  E-value=1.4e-30  Score=239.61  Aligned_cols=226  Identities=12%  Similarity=0.117  Sum_probs=173.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchh--hhcCCCCcEEEccCCCcccHHHHhc-----CCCEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESK--QKIGGADDLFIGDIRDSNSIIPAIQ-----GIDAL  151 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~--~~l~~~~~~v~~Dl~d~~~~~~~l~-----~~d~V  151 (331)
                      +.+|+||||||+||||++|+++|+++  | ++|++++|++...  ..+. .+. +.+|+.|++.+.++++     ++|+|
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHT--TCCCEEEEECCSSGGGGGGTT-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCcEEEEEecCCCcchhhccc-Cce-EeeecCcHHHHHHHHhhcccCCCCEE
Confidence            44678999999999999999999999  9 9999999986542  2222 244 7889999999999887     59999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC----CCCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL----NSLG  225 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~----~~~~  225 (331)
                      ||+||....        ...+++..+       ++|+.++.+++++|++.++ +||++||..++....  +.    ...+
T Consensus       120 ih~A~~~~~--------~~~~~~~~~-------~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p  183 (357)
T 2x6t_A          120 FHEGACSST--------TEWDGKYMM-------DNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKP  183 (357)
T ss_dssp             EECCSCCCT--------TCCCHHHHH-------HHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCC
T ss_pred             EECCcccCC--------ccCCHHHHH-------HHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCC
Confidence            999996432        122334444       8899999999999999999 999999987643321  11    0112


Q ss_pred             cchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc-------h-----hhhhccCCccccC---C-cccccCHHH
Q 046297          226 NGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG-------I-----RELLVGKDDELLQ---T-ETRTIARAD  285 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~-------~-----~~~~~~~~~~~~~---~-~~~~i~v~D  285 (331)
                      .+.|+.+|..+|++++.    .+++++++||+++||+...       .     .....+....+++   . .+++++++|
T Consensus       184 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  263 (357)
T 2x6t_A          184 LNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  263 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHH
Confidence            36799999999998874    4799999999999998642       1     1222344333332   2 568899999


Q ss_pred             HHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          286 VAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       286 va~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +|++++.+++++.  +++||+++   ++.+++.|+++.+.+++|+
T Consensus       264 va~ai~~~~~~~~--~~~~~i~~---~~~~s~~e~~~~i~~~~g~  303 (357)
T 2x6t_A          264 VADVNLWFLENGV--SGIFNLGT---GRAESFQAVADATLAYHKK  303 (357)
T ss_dssp             HHHHHHHHHHHCC--CEEEEESC---SCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCC--CCeEEecC---CCcccHHHHHHHHHHHcCC
Confidence            9999999998775  78999998   8899999999999999875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=5.2e-31  Score=240.52  Aligned_cols=229  Identities=18%  Similarity=0.123  Sum_probs=174.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEE-EccCCCcccHHHHhcCCCE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLF-IGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v-~~Dl~d~~~~~~~l~~~d~  150 (331)
                      +.+++||||||+||||++++++|+++  |++|++++|+.++...+        ..+++++ .+|++|++.+.++++++|+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            45689999999999999999999999  99999999987654322        2457778 8999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH-cCCCeEEEEccCCCCC-CC-----CCCC-
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA-AGAKQIVLVGSMGGTN-LN-----HPLN-  222 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~-~~vk~~v~~SS~~~~~-~~-----~~~~-  222 (331)
                      |||+||.....         .+|+..+       ++|+.++.+++++|++ .++++||++||..++. ..     .+.. 
T Consensus        87 vih~A~~~~~~---------~~~~~~~-------~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E  150 (342)
T 1y1p_A           87 VAHIASVVSFS---------NKYDEVV-------TPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             EEECCCCCSCC---------SCHHHHH-------HHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             EEEeCCCCCCC---------CCHHHHH-------HHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCc
Confidence            99999964321         2344444       8899999999999984 6889999999986642 11     1110 


Q ss_pred             -------------------CCCcchHHHHHHHHHHHHHhc------CCCEEEEecCcccCCCcch-----------hhhh
Q 046297          223 -------------------SLGNGNILVWKRKAEQYLADS------GIPYTIIRAGGLQDKEGGI-----------RELL  266 (331)
Q Consensus       223 -------------------~~~~~~y~~sK~~~e~~~~~~------~~~~~ilrp~~v~g~~~~~-----------~~~~  266 (331)
                                         ..+.+.|+.+|..+|.+++.+      +++++++||+++||+....           ....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~  230 (342)
T 1y1p_A          151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLF  230 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHH
T ss_pred             cccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHH
Confidence                               012267999999999887642      7889999999999986421           1223


Q ss_pred             ccCCccccC--CcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          267 VGKDDELLQ--TETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       267 ~~~~~~~~~--~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .+....+.+  ..++++|++|+|++++.+++++...|+.+. +.   ++.+|+.|+++.+.+++|+
T Consensus       231 ~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~-~~---g~~~s~~e~~~~i~~~~~~  292 (342)
T 1y1p_A          231 NGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVY-GT---AGTFDWNTVLATFRKLYPS  292 (342)
T ss_dssp             TTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEE-EC---CEEECHHHHHHHHHHHCTT
T ss_pred             cCCCccccccCCcCCEeEHHHHHHHHHHHHcCcccCCceEE-Ee---CCCCCHHHHHHHHHHHCCC
Confidence            343332221  357899999999999999987655565553 44   5679999999999998874

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.97  E-value=1.9e-31  Score=239.26  Aligned_cols=218  Identities=15%  Similarity=0.108  Sum_probs=171.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC--CCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG--IDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~ag~~~~  160 (331)
                      |+||||||+||||++++++|+ +  ||+|++++|++.          ++.+|+.|++.+.+++++  +|+|||+||....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-P--VGNLIALDVHSK----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTCS----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-c--CCeEEEeccccc----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            479999999999999999999 8  999999999852          457899999999999986  9999999986331


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC--C----CCCCcchHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP--L----NSLGNGNILVWKR  234 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~--~----~~~~~~~y~~sK~  234 (331)
                      .      ....+++..+       ++|+.++.+++++|++.++ +|||+||.+++.....  .    ...+.+.|+.+|.
T Consensus        68 ~------~~~~~~~~~~-------~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~  133 (299)
T 1n2s_A           68 D------KAESEPELAQ-------LLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKL  133 (299)
T ss_dssp             H------HHTTCHHHHH-------HHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHH
T ss_pred             h------hhhcCHHHHH-------HHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHH
Confidence            0      0123334444       8899999999999999888 8999999866433211  0    1112367999999


Q ss_pred             HHHHHHHhcCCCEEEEecCcccCCCcc-h-----hhhhccCCcccc-CCcccccCHHHHHHHHHHHhcCcc--c-CCceE
Q 046297          235 KAEQYLADSGIPYTIIRAGGLQDKEGG-I-----RELLVGKDDELL-QTETRTIARADVAEVCIQALQFEE--A-KFKAF  304 (331)
Q Consensus       235 ~~e~~~~~~~~~~~ilrp~~v~g~~~~-~-----~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~~~--~-~~~~~  304 (331)
                      .+|++++....+++++||+++||+... +     .....+....+. +..++++|++|+|++++.+++++.  . .+++|
T Consensus       134 ~~E~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~  213 (299)
T 1n2s_A          134 AGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLY  213 (299)
T ss_dssp             HHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEE
T ss_pred             HHHHHHHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceE
Confidence            999999988889999999999998653 1     112223333232 345889999999999999998763  2 47899


Q ss_pred             EeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          305 DLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       305 ~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |+++   ++.+|+.|+++.+.+++|+
T Consensus       214 ~i~~---~~~~s~~e~~~~i~~~~g~  236 (299)
T 1n2s_A          214 HLVA---GGTTTWHDYAALVFDEARK  236 (299)
T ss_dssp             ECCC---BSCEEHHHHHHHHHHHHHH
T ss_pred             EEeC---CCCCCHHHHHHHHHHHhCC
Confidence            9999   8899999999999998874

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.97  E-value=7.4e-31  Score=237.42  Aligned_cols=216  Identities=15%  Similarity=0.093  Sum_probs=165.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc----hhhhcC-----CCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE----SKQKIG-----GADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~----~~~~l~-----~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      ++++||||||+||||++|+++|+++  |++|++++|+..    ....+.     ..++++.+|+.          ++|+|
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~v   73 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLV   73 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEE
Confidence            4689999999999999999999999  999999999875    222211     23555556654          89999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC--------CCCCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN--------HPLNS  223 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~--------~~~~~  223 (331)
                      ||+|+.....      ....+|...       .+ |+.++.+++++|++.++++|||+||.+++...        .+.. 
T Consensus        74 i~~a~~~~~~------~~~~~~~~~-------~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~-  138 (321)
T 3vps_A           74 YHLASHKSVP------RSFKQPLDY-------LD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLS-  138 (321)
T ss_dssp             EECCCCCCHH------HHTTSTTTT-------HH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCC-
T ss_pred             EECCccCChH------HHHhCHHHH-------HH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCC-
Confidence            9999964321      112233333       37 99999999999999999999999998654322        2222 


Q ss_pred             CCcchHHHHHHHHHHHHHh----cCC-CEEEEecCcccCCCcch--------hhhhccCCccccC---CcccccCHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLAD----SGI-PYTIIRAGGLQDKEGGI--------RELLVGKDDELLQ---TETRTIARADVA  287 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~~----~~~-~~~ilrp~~v~g~~~~~--------~~~~~~~~~~~~~---~~~~~i~v~Dva  287 (331)
                       +.+.|+.+|..+|++++.    .++ +++++||+++||+....        .....+....+++   ..++++|++|+|
T Consensus       139 -p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  217 (321)
T 3vps_A          139 -PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVV  217 (321)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHH
T ss_pred             -CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHH
Confidence             236799999999988874    688 99999999999987541        2233344444433   447899999999


Q ss_pred             HHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          288 EVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++.+++++.. | +||+++   ++.+++.|+++.+. .+|+
T Consensus       218 ~~~~~~~~~~~~-g-~~~i~~---~~~~s~~e~~~~i~-~~g~  254 (321)
T 3vps_A          218 DKLVALANRPLP-S-VVNFGS---GQSLSVNDVIRILQ-ATSP  254 (321)
T ss_dssp             HHHHHGGGSCCC-S-EEEESC---SCCEEHHHHHHHHH-TTCT
T ss_pred             HHHHHHHhcCCC-C-eEEecC---CCcccHHHHHHHHH-HhCC
Confidence            999999998765 6 999999   89999999999999 8774

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=1.7e-31  Score=240.85  Aligned_cols=230  Identities=15%  Similarity=0.161  Sum_probs=175.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      +|+||||||+||||++|+++|+++.+|++|++++|++.+.. +..+++++.+|+.|++.+.++++  ++|+|||+||...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   80 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLS   80 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence            46899999999999999999998733799999999876532 23458899999999999999998  8999999998632


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC---C----CCCCcchHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP---L----NSLGNGNILVW  232 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~---~----~~~~~~~y~~s  232 (331)
                      ..       ...+++..       .++|+.++.+++++|++.++++||++||.+++....+   .    ...+.+.|+.+
T Consensus        81 ~~-------~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~s  146 (312)
T 2yy7_A           81 AT-------AEKNPAFA-------WDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGIS  146 (312)
T ss_dssp             HH-------HHHCHHHH-------HHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHH
T ss_pred             Cc-------hhhChHHH-------HHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHH
Confidence            10       01123333       3889999999999999999999999999876543211   0    11223679999


Q ss_pred             HHHHHHHHHh----cCCCEEEEecCcccCCCc----c----h----hhhhccCCcccc---CCcccccCHHHHHHHHHHH
Q 046297          233 KRKAEQYLAD----SGIPYTIIRAGGLQDKEG----G----I----RELLVGKDDELL---QTETRTIARADVAEVCIQA  293 (331)
Q Consensus       233 K~~~e~~~~~----~~~~~~ilrp~~v~g~~~----~----~----~~~~~~~~~~~~---~~~~~~i~v~Dva~~~~~~  293 (331)
                      |..+|.+++.    ++++++++||+++||+..    .    .    ...+.+.....+   +..++++|++|+|++++.+
T Consensus       147 K~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  226 (312)
T 2yy7_A          147 KQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINI  226 (312)
T ss_dssp             HHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHH
Confidence            9999988763    589999999999999531    1    1    122223322222   3458899999999999999


Q ss_pred             hcCccc---CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          294 LQFEEA---KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       294 l~~~~~---~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++..   .+++||+++    +.+|+.|+++.+.+.+|+
T Consensus       227 ~~~~~~~~~~~~~~ni~~----~~~s~~e~~~~i~~~~~~  262 (312)
T 2yy7_A          227 MKAPVEKIKIHSSYNLAA----MSFTPTEIANEIKKHIPE  262 (312)
T ss_dssp             HHSCGGGCCCSSCEECCS----EEECHHHHHHHHHTTCTT
T ss_pred             HhCcccccccCceEEeCC----CccCHHHHHHHHHHHCCC
Confidence            987653   247999985    579999999999988763

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.97  E-value=6e-31  Score=238.32  Aligned_cols=220  Identities=15%  Similarity=0.197  Sum_probs=169.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAV  158 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~  158 (331)
                      .+|+||||||+||||++|+++|+++  |++|+++.|+.             .+|+.|.+.+.++++  ++|+|||+|+..
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~-------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~   66 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD-------------ELNLLDSRAVHDFFASERIDQVYLAAAKV   66 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT-------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCc-------------cCCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence            3578999999999999999999999  99999988863             279999999999998  999999999863


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC--------CCCC-cc
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL--------NSLG-NG  227 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~--------~~~~-~~  227 (331)
                      ...     .....+|+..       .++|+.++.+++++|++.++++||++||.+++....  +.        ...+ .+
T Consensus        67 ~~~-----~~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~  134 (321)
T 1e6u_A           67 GGI-----VANNTYPADF-------IYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNE  134 (321)
T ss_dssp             CCH-----HHHHHCHHHH-------HHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGH
T ss_pred             CCc-----chhhhCHHHH-------HHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCC
Confidence            210     0001123333       378999999999999999999999999987653211  11        1111 14


Q ss_pred             hHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc-------h-h----hhhc----c-CCcccc---CCcccccCH
Q 046297          228 NILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG-------I-R----ELLV----G-KDDELL---QTETRTIAR  283 (331)
Q Consensus       228 ~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~-------~-~----~~~~----~-~~~~~~---~~~~~~i~v  283 (331)
                      .|+.+|..+|++++.    .+++++++||+++||+...       + .    ....    | ....++   ...++++|+
T Consensus       135 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v  214 (321)
T 1e6u_A          135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV  214 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEH
Confidence            799999999998875    5899999999999998653       1 1    1111    2 222222   234789999


Q ss_pred             HHHHHHHHHHhcCcccC--------CceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          284 ADVAEVCIQALQFEEAK--------FKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~~~--------~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +|+|++++.+++++...        +++||+++   ++.+|+.|+++.+.+.+|+
T Consensus       215 ~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~---~~~~s~~e~~~~i~~~~g~  266 (321)
T 1e6u_A          215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGT---GVDCTIRELAQTIAKVVGY  266 (321)
T ss_dssp             HHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESC---SCCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhCcccccccccccCCceEEeCC---CCCccHHHHHHHHHHHhCC
Confidence            99999999999877542        57999998   8899999999999998874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.6e-30  Score=245.82  Aligned_cols=229  Identities=17%  Similarity=0.157  Sum_probs=174.2

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCC-CCeEEEEecCCchhhh----------------------cCCCCcEEEccC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSE-QYAARGLVRTEESKQK----------------------IGGADDLFIGDI  135 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~-g~~V~~l~R~~~~~~~----------------------l~~~~~~v~~Dl  135 (331)
                      ...+|+||||||+||||++|+++|+++++ |++|++++|+++....                      ...+++++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            34578999999999999999999999854 6999999998754311                      124689999999


Q ss_pred             C------CcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          136 R------DSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       136 ~------d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +      |.+.+.++++++|+|||+||....          .+++..       .++|+.++.+++++|++.++++|||+
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----------~~~~~~-------~~~Nv~gt~~ll~aa~~~~~~~~V~i  212 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA----------FPYHEL-------FGPNVAGTAELIRIALTTKLKPFTYV  212 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB----------SSCCEE-------HHHHHHHHHHHHHHHTSSSCCCEEEE
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC----------cCHHHH-------HHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            8      556788999999999999997432          223333       38899999999999999999999999


Q ss_pred             ccCCCCCCCCC--CCCC------C---------cchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCc-----c--
Q 046297          210 GSMGGTNLNHP--LNSL------G---------NGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEG-----G--  261 (331)
Q Consensus       210 SS~~~~~~~~~--~~~~------~---------~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~-----~--  261 (331)
                      ||.+++....+  ....      .         .+.|+.+|+.+|.++++    .+++++++|||+|||+..     .  
T Consensus       213 SS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~  292 (478)
T 4dqv_A          213 STADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMS  292 (478)
T ss_dssp             EEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTT
T ss_pred             eehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHH
Confidence            99866433211  1100      0         14499999999998875    599999999999999743     1  


Q ss_pred             --hhhhhc-----cCCccc-c---------CCcccccCHHHHHHHHHHHhcC----cccCCceEEeccCCCCCC--CCHH
Q 046297          262 --IRELLV-----GKDDEL-L---------QTETRTIARADVAEVCIQALQF----EEAKFKAFDLASKPEGTG--TPTK  318 (331)
Q Consensus       262 --~~~~~~-----~~~~~~-~---------~~~~~~i~v~Dva~~~~~~l~~----~~~~~~~~~i~~~~~~~~--~t~~  318 (331)
                        +..++.     |..... +         ...++++|++|+|++++.++.+    +...+++||+++   ++.  +++.
T Consensus       293 ~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~---~~~~~~s~~  369 (478)
T 4dqv_A          293 DWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMN---PHDDGIGLD  369 (478)
T ss_dssp             BHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESC---CCCSSCSHH
T ss_pred             HHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecC---CCCCCcCHH
Confidence              111111     111111 1         2347889999999999999876    455678999998   776  9999


Q ss_pred             HHHHHHHHh
Q 046297          319 DFKALFSQI  327 (331)
Q Consensus       319 e~~~~~~~~  327 (331)
                      |+++.+.+.
T Consensus       370 el~~~l~~~  378 (478)
T 4dqv_A          370 EYVDWLIEA  378 (478)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHc
Confidence            999999885

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=9.5e-31  Score=235.66  Aligned_cols=222  Identities=12%  Similarity=0.124  Sum_probs=164.8

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchh--hhcCCCCcEEEccCCCcccHHHHhcC-----CCEEEEcc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESK--QKIGGADDLFIGDIRDSNSIIPAIQG-----IDALIILT  155 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~--~~l~~~~~~v~~Dl~d~~~~~~~l~~-----~d~Vi~~a  155 (331)
                      +||||||+||||++|+++|+++  | ++|++++|++...  ..+. ++. +.+|+.|.+.+.+++++     +|+|||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEG   76 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHH-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred             CEEEEcCccHHHHHHHHHHHHC--CCcEEEEEccCCCCchhhhcC-cce-eccccccHHHHHHHHhccccCCCcEEEECc
Confidence            4899999999999999999999  9 9999999986542  2222 234 78999999999999875     99999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC----CCCCcchH
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL----NSLGNGNI  229 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~----~~~~~~~y  229 (331)
                      +....        ...+++..+       ++|+.++.+++++|++.++ +||++||.+++....  +.    ...+.+.|
T Consensus        77 ~~~~~--------~~~~~~~~~-------~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y  140 (310)
T 1eq2_A           77 ACSST--------TEWDGKYMM-------DNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (310)
T ss_dssp             SCCCT--------TCCCHHHHH-------HHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             ccccC--------cccCHHHHH-------HHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChh
Confidence            96432        123344444       8899999999999999999 999999986643221  11    11223679


Q ss_pred             HHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc-------h-----hhhhccCCccccC---C-cccccCHHHHHHH
Q 046297          230 LVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG-------I-----RELLVGKDDELLQ---T-ETRTIARADVAEV  289 (331)
Q Consensus       230 ~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~-------~-----~~~~~~~~~~~~~---~-~~~~i~v~Dva~~  289 (331)
                      +.+|..+|.+++.    .+++++++||+++||+...       .     .....+....+++   . .++++|++|+|++
T Consensus       141 ~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~  220 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (310)
T ss_dssp             HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHH
Confidence            9999999998874    4899999999999998753       1     1122333333332   3 5689999999999


Q ss_pred             HHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          290 CIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       290 ~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++.+++++.  +++||+++   ++.+|+.|+++.+.+.+|+
T Consensus       221 ~~~~~~~~~--~~~~~i~~---~~~~s~~e~~~~i~~~~g~  256 (310)
T 1eq2_A          221 NLWFLENGV--SGIFNLGT---GRAESFQAVADATLAYHKK  256 (310)
T ss_dssp             HHHHHHHCC--CEEEEESC---SCCBCHHHHHHHC------
T ss_pred             HHHHHhcCC--CCeEEEeC---CCccCHHHHHHHHHHHcCC
Confidence            999998775  78999998   8999999999999988774

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.97  E-value=1.6e-30  Score=244.96  Aligned_cols=224  Identities=15%  Similarity=0.150  Sum_probs=170.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh-------------------hcCCCCcEEEccCCCcc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-------------------KIGGADDLFIGDIRDSN  139 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-------------------~l~~~~~~v~~Dl~d~~  139 (331)
                      ...+++||||||+||||++|+++|+++  |++|++++|+++..+                   ....++.++.+|+.|++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            345679999999999999999999988  999999999987211                   12356899999999988


Q ss_pred             cHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC-----
Q 046297          140 SIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG-----  214 (331)
Q Consensus       140 ~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~-----  214 (331)
                      .+. .+.++|+|||+||....         ..+++.       ..++|+.++.+++++|++ ++++||++||.++     
T Consensus       144 ~l~-~~~~~d~Vih~A~~~~~---------~~~~~~-------~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~  205 (427)
T 4f6c_A          144 DVV-LPENMDTIIHAGARTDH---------FGDDDE-------FEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFD  205 (427)
T ss_dssp             CCC-CSSCCSEEEECCCCC----------------C-------HHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEEC
T ss_pred             cCC-CcCCCCEEEECCcccCC---------CCCHHH-------HHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCcc
Confidence            777 77899999999997432         122333       348899999999999999 8899999999876     


Q ss_pred             -------CCCCCCCC-CCCcchHHHHHHHHHHHHHh---cCCCEEEEecCcccCCCcch-----------hhhh----cc
Q 046297          215 -------TNLNHPLN-SLGNGNILVWKRKAEQYLAD---SGIPYTIIRAGGLQDKEGGI-----------RELL----VG  268 (331)
Q Consensus       215 -------~~~~~~~~-~~~~~~y~~sK~~~e~~~~~---~~~~~~ilrp~~v~g~~~~~-----------~~~~----~~  268 (331)
                             +.+..+.. ....+.|+.+|+.+|.++++   .+++++++|||+|||+....           ..++    .+
T Consensus       206 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (427)
T 4f6c_A          206 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQL  285 (427)
T ss_dssp             SSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHS
T ss_pred             CCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhc
Confidence                   01111111 11347899999999998875   79999999999999986431           1111    12


Q ss_pred             CCccc--cCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHH
Q 046297          269 KDDEL--LQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQ  326 (331)
Q Consensus       269 ~~~~~--~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~  326 (331)
                      .....  .+..+++++++|+|++++.++..+. .+++||+++   ++++++.|+++.+.+
T Consensus       286 ~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~---~~~~s~~el~~~i~~  341 (427)
T 4f6c_A          286 DCIGVSMAEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLS---PNKMPVKSLLECVKR  341 (427)
T ss_dssp             SEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC-CCSEEEESC---SCCEEHHHHHHHHHS
T ss_pred             CCCCCccccceEEEeeHHHHHHHHHHHHcCCC-CCCEEEecC---CCCCcHHHHHHHHHH
Confidence            22222  2456889999999999999998877 788999999   899999999999986

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=7.9e-31  Score=235.44  Aligned_cols=219  Identities=21%  Similarity=0.231  Sum_probs=171.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhh--hc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQ--KI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~--~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +|+||||||||+||++++++|+++  | ++|++++|++++..  .+ ..+++++.+|+.|++++.++++++|+|||+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   82 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNY   82 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence            478999999999999999999999  8 99999999876532  22 346899999999999999999999999999984


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHH
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAE  237 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e  237 (331)
                      ....                     ..+.|+.++.+++++|++.|+++||++|+.+.+......   ....|+.+|..+|
T Consensus        83 ~~~~---------------------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~---~~~~y~~sK~~~e  138 (299)
T 2wm3_A           83 WESC---------------------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGR---LAAAHFDGKGEVE  138 (299)
T ss_dssp             HHHT---------------------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTS---CCCHHHHHHHHHH
T ss_pred             Cccc---------------------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCc---ccCchhhHHHHHH
Confidence            2110                     014578899999999999999999997776543211111   1256999999999


Q ss_pred             HHHHhcCCCEEEEecCcccCCCcc-hhh-hh-ccCC--ccc--cCCcccccCHHHHHHHHHHHhcCcc-cCCceEEeccC
Q 046297          238 QYLADSGIPYTIIRAGGLQDKEGG-IRE-LL-VGKD--DEL--LQTETRTIARADVAEVCIQALQFEE-AKFKAFDLASK  309 (331)
Q Consensus       238 ~~~~~~~~~~~ilrp~~v~g~~~~-~~~-~~-~~~~--~~~--~~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~i~~~  309 (331)
                      +++++.++++++|||++++|+... +.. .. .+..  ..+  .+..+++++++|+|++++.++.++. ..|++|++++ 
T Consensus       139 ~~~~~~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-  217 (299)
T 2wm3_A          139 EYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-  217 (299)
T ss_dssp             HHHHHHTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-
T ss_pred             HHHHHCCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-
Confidence            999999999999999999997532 111 11 1211  112  2455789999999999999998753 5678999985 


Q ss_pred             CCCCCCCHHHHHHHHHHhhcc
Q 046297          310 PEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       310 ~~~~~~t~~e~~~~~~~~~g~  330 (331)
                         +.+|+.|+++.+.+++|+
T Consensus       218 ---~~~s~~e~~~~~~~~~g~  235 (299)
T 2wm3_A          218 ---CRHTAEEYAALLTKHTRK  235 (299)
T ss_dssp             ---EEECHHHHHHHHHHHHSS
T ss_pred             ---ccCCHHHHHHHHHHHHCC
Confidence               469999999999999885

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.97  E-value=9.3e-31  Score=234.06  Aligned_cols=214  Identities=17%  Similarity=0.162  Sum_probs=169.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      .++||||||+||||++|+++|+++  |++|++++|+              .+|+.|++.+.++++  ++|+|||+||...
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~--------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   75 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQ--------------DLDITNVLAVNKFFNEKKPNVVINCAAHTA   75 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             cceEEEECCCChHHHHHHHHHHhC--CCeEEeccCc--------------cCCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence            578999999999999999999999  9999999996              379999999999998  8999999998632


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC----CCCCcchHHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL----NSLGNGNILVWK  233 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~----~~~~~~~y~~sK  233 (331)
                      ..      ....+++.       ..++|+.++.+++++|++.++ +||++||..++....  +.    ...+.+.|+.+|
T Consensus        76 ~~------~~~~~~~~-------~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK  141 (292)
T 1vl0_A           76 VD------KCEEQYDL-------AYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTK  141 (292)
T ss_dssp             HH------HHHHCHHH-------HHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHH
T ss_pred             HH------HHhcCHHH-------HHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHH
Confidence            10      00112233       338899999999999999998 999999986543321  11    011236799999


Q ss_pred             HHHHHHHHhcCCCEEEEecCcccCCCcchhh-----hhccCCcccc-CCcccccCHHHHHHHHHHHhcCcccCCceEEec
Q 046297          234 RKAEQYLADSGIPYTIIRAGGLQDKEGGIRE-----LLVGKDDELL-QTETRTIARADVAEVCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       234 ~~~e~~~~~~~~~~~ilrp~~v~g~~~~~~~-----~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~  307 (331)
                      ..+|++++..+.+++++||+++||+...+..     ...+....+. +..+++++++|+|++++.+++++  .+++||++
T Consensus       142 ~~~E~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~  219 (292)
T 1vl0_A          142 LEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK--NYGTFHCT  219 (292)
T ss_dssp             HHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT--CCEEEECC
T ss_pred             HHHHHHHHhhCCCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC--CCcEEEec
Confidence            9999999998889999999999998433221     1223332222 34578999999999999999876  57899999


Q ss_pred             cCCCCCCCCHHHHHHHHHHhhcc
Q 046297          308 SKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       308 ~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +   ++.+|+.|+++.+.+.+|+
T Consensus       220 ~---~~~~s~~e~~~~i~~~~g~  239 (292)
T 1vl0_A          220 C---KGICSWYDFAVEIFRLTGI  239 (292)
T ss_dssp             C---BSCEEHHHHHHHHHHHHCC
T ss_pred             C---CCCccHHHHHHHHHHHhCC
Confidence            9   8899999999999998874

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.97  E-value=2.1e-30  Score=234.78  Aligned_cols=227  Identities=21%  Similarity=0.206  Sum_probs=163.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCch---hh---hcC---CCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEES---KQ---KIG---GADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~---~~---~l~---~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      +++||||||+||||++|+++|+++  ||+|++++| +++.   ..   .+.   .+++++.+|++|++.+.++++++|+|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   78 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGI   78 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHC--CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEE
Confidence            368999999999999999999999  999999998 5432   11   121   13678899999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCCCCC----CCCC---
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTNLNH----PLNS---  223 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~~~~----~~~~---  223 (331)
                      ||+|+....        ...+|..      ...++|+.++.+++++|++. ++++||++||..++....    +...   
T Consensus        79 ih~A~~~~~--------~~~~~~~------~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~  144 (322)
T 2p4h_X           79 FHTASPIDF--------AVSEPEE------IVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDW  144 (322)
T ss_dssp             EECCCCC----------------C------HHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCC
T ss_pred             EEcCCcccC--------CCCChHH------HHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccc
Confidence            999974210        1112211      13488999999999999988 799999999986321110    0000   


Q ss_pred             ---------CCc-chHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch-----h----hhhccCCccccCCcccc
Q 046297          224 ---------LGN-GNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI-----R----ELLVGKDDELLQTETRT  280 (331)
Q Consensus       224 ---------~~~-~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~-----~----~~~~~~~~~~~~~~~~~  280 (331)
                               ... ..|+.+|..+|.++.    +++++++++||+++||+....     .    ....+....+....+++
T Consensus       145 ~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  224 (322)
T 2p4h_X          145 SDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHM  224 (322)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEE
T ss_pred             cchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCE
Confidence                     001 159999999998765    468999999999999986421     0    11233332233233479


Q ss_pred             cCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          281 IARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +|++|+|++++.+++++...|+ || .+   ++.+|+.|+++.+.+..+
T Consensus       225 i~v~Dva~a~~~~~~~~~~~g~-~~-~~---~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          225 VHVDDVARAHIYLLENSVPGGR-YN-CS---PFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             EEHHHHHHHHHHHHHSCCCCEE-EE-CC---CEEEEHHHHHHHHHHHCT
T ss_pred             EEHHHHHHHHHHHhhCcCCCCC-EE-Ec---CCCCCHHHHHHHHHHhCC
Confidence            9999999999999987655554 88 45   677999999999987653

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.97  E-value=1.5e-30  Score=237.50  Aligned_cols=229  Identities=21%  Similarity=0.223  Sum_probs=169.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----hhhc----CCCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----KQKI----GGADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----~~~l----~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      |+||||||+||||++++++|+++  |++|++++|....    ...+    ..++.++.+|++|++.+.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            47999999999999999999999  9999999874321    1111    2357899999999999999887  599999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC--------CCCCCCC
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL--------NHPLNSL  224 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~--------~~~~~~~  224 (331)
                      |+||.....      ....+++..       .++|+.++.+++++|++.++++||++||..++..        ..+..+ 
T Consensus        79 h~A~~~~~~------~~~~~~~~~-------~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~-  144 (338)
T 1udb_A           79 HFAGLKAVG------ESVQKPLEY-------YDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGT-  144 (338)
T ss_dssp             ECCSCCCHH------HHHHCHHHH-------HHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC-
T ss_pred             ECCccCccc------cchhcHHHH-------HHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCC-
Confidence            999863210      001122223       3889999999999999999999999999875432        122111 


Q ss_pred             CcchHHHHHHHHHHHHHh----c-CCCEEEEecCcccCCCc-------------chh----hhhccCCc--ccc------
Q 046297          225 GNGNILVWKRKAEQYLAD----S-GIPYTIIRAGGLQDKEG-------------GIR----ELLVGKDD--ELL------  274 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~~----~-~~~~~ilrp~~v~g~~~-------------~~~----~~~~~~~~--~~~------  274 (331)
                      ..+.|+.+|..+|.+++.    . +++++++||+++||+..             .+.    ....+...  .+.      
T Consensus       145 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  224 (338)
T 1udb_A          145 PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             CCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccC
Confidence            136799999999988764    3 79999999999998732             111    11111111  111      


Q ss_pred             ---CCcccccCHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          275 ---QTETRTIARADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       275 ---~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                         ...++++|++|+|++++.+++.+.  ..+++||+++   ++++|+.|+++.+.+++|+
T Consensus       225 ~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~---~~~~s~~e~~~~i~~~~g~  282 (338)
T 1udb_A          225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGA---GVGNSVLDVVNAFSKACGK  282 (338)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESC---SCCEEHHHHHHHHHHHHTS
T ss_pred             CCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecC---CCceeHHHHHHHHHHHhCC
Confidence               123689999999999999997642  2247999998   8899999999999998874

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.97  E-value=4.7e-30  Score=236.33  Aligned_cols=224  Identities=16%  Similarity=0.121  Sum_probs=172.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCC-----CeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC---CCEEEEc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQ-----YAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG---IDALIIL  154 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g-----~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~---~d~Vi~~  154 (331)
                      |+||||||+||||++|+++|+++  |     ++|++++|++........+++++.+|+.|++.+.+++++   +|+|||+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~   79 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLA--DTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV   79 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTST--TCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC--CCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence            68999999999999999999999  8     999999998765432234588999999999999999998   9999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEE-------EEccCCCCCC--------
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIV-------LVGSMGGTNL--------  217 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v-------~~SS~~~~~~--------  217 (331)
                      |+...           .+++..+       ++|+.++.+++++|++.  ++++||       |+||.+++..        
T Consensus        80 a~~~~-----------~~~~~~~-------~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~  141 (364)
T 2v6g_A           80 TWANR-----------STEQENC-------EANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPY  141 (364)
T ss_dssp             CCCCC-----------SSHHHHH-------HHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSB
T ss_pred             CCCCc-----------chHHHHH-------HHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCC
Confidence            98631           1233344       88999999999999998  899998       7888765432        


Q ss_pred             --CCCCCCCCcchHHHHHHHHHHHHHhcC-CCEEEEecCcccCCCcc----------hhhhh---ccCCccccCCc----
Q 046297          218 --NHPLNSLGNGNILVWKRKAEQYLADSG-IPYTIIRAGGLQDKEGG----------IRELL---VGKDDELLQTE----  277 (331)
Q Consensus       218 --~~~~~~~~~~~y~~sK~~~e~~~~~~~-~~~~ilrp~~v~g~~~~----------~~~~~---~~~~~~~~~~~----  277 (331)
                        ..+..+ ..+.|...+..++++.++++ ++++++||+++||+...          ....+   .+....+++.+    
T Consensus       142 ~E~~~~~~-~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~  220 (364)
T 2v6g_A          142 TEDLPRLK-YMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWD  220 (364)
T ss_dssp             CTTSCCCS-SCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHH
T ss_pred             CccccCCc-cchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccccc
Confidence              111111 12567554444555544566 99999999999998642          12222   34444444433    


Q ss_pred             --ccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          278 --TRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       278 --~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                        .++++++|+|++++.+++++...+++||+++   ++.+|+.|+++.+.+.+|+
T Consensus       221 ~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~---~~~~s~~e~~~~i~~~~g~  272 (364)
T 2v6g_A          221 GYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSN---GDVFKWKHFWKVLAEQFGV  272 (364)
T ss_dssp             SCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECC---SCCBCHHHHHHHHHHHHTC
T ss_pred             ccCCCCcHHHHHHHHHHHHhCCCCCCceEEecC---CCcCCHHHHHHHHHHHhCC
Confidence              5667889999999999988766688999999   8889999999999999874

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=2.6e-30  Score=236.19  Aligned_cols=228  Identities=17%  Similarity=0.148  Sum_probs=174.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh-----hcC--CCCcEEEccCCCcccHHHHhcC--CCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-----KIG--GADDLFIGDIRDSNSIIPAIQG--IDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-----~l~--~~~~~v~~Dl~d~~~~~~~l~~--~d~V  151 (331)
                      ++|+||||||+||||++++++|+++  |++|++++|++++..     .+.  .+++++.+|++|++.+.+++++  +|+|
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   79 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEV   79 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            4678999999999999999999999  999999999875432     121  2578899999999999999985  6999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC-CeEEEEccCCCCC--------CCCCCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA-KQIVLVGSMGGTN--------LNHPLN  222 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-k~~v~~SS~~~~~--------~~~~~~  222 (331)
                      ||+||....      .....+++..+       ++|+.++.+++++|++.++ ++||++||..++.        +..+..
T Consensus        80 ih~A~~~~~------~~~~~~~~~~~-------~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           80 YNLAAQSFV------GVSFEQPILTA-------EVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             EECCCCCCH------HHHTTSHHHHH-------HHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             EECCCCcch------hhhhhCHHHHH-------HHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence            999996321      00122333333       8899999999999998887 8999999986542        222222


Q ss_pred             CCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcch-------h----hhhccCCcc-ccC---CcccccCH
Q 046297          223 SLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGGI-------R----ELLVGKDDE-LLQ---TETRTIAR  283 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~~-------~----~~~~~~~~~-~~~---~~~~~i~v  283 (331)
                        +.+.|+.+|..+|.+++.    ++++++++|+.++|||....       .    ....+.... ..+   ..++++|+
T Consensus       147 --~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  224 (345)
T 2z1m_A          147 --PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYA  224 (345)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEH
T ss_pred             --CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEH
Confidence              236799999999988764    58999999999999986421       1    111232222 222   34679999


Q ss_pred             HHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          284 ADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +|+|++++.+++++.  +++||+++   ++.+++.|+++.+.+.+|+
T Consensus       225 ~Dva~a~~~~~~~~~--~~~~~i~~---~~~~s~~e~~~~i~~~~g~  266 (345)
T 2z1m_A          225 PEYVEAMWLMMQQPE--PDDYVIAT---GETHTVREFVEKAAKIAGF  266 (345)
T ss_dssp             HHHHHHHHHHHTSSS--CCCEEECC---SCCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCC--CceEEEeC---CCCccHHHHHHHHHHHhCC
Confidence            999999999998764  36899999   8999999999999998874

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=8.4e-30  Score=235.45  Aligned_cols=227  Identities=19%  Similarity=0.184  Sum_probs=171.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-----hhhc-------CCCCcEEEccCCCcccHHHHhcC--
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-----KQKI-------GGADDLFIGDIRDSNSIIPAIQG--  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~l-------~~~~~~v~~Dl~d~~~~~~~l~~--  147 (331)
                      +|+||||||+||||++++++|+++  |++|++++|+++.     ...+       ..+++++.+|++|++.+.+++++  
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ   78 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence            478999999999999999999999  9999999998643     1222       13578889999999999999985  


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC---CeEEEEccCCCCCC-------
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA---KQIVLVGSMGGTNL-------  217 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---k~~v~~SS~~~~~~-------  217 (331)
                      +|+|||+||....      .....+++..+       ++|+.++.+++++|++.++   ++||++||..++..       
T Consensus        79 ~d~vih~A~~~~~------~~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~  145 (372)
T 1db3_A           79 PDEVYNLGAMSHV------AVSFESPEYTA-------DVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQK  145 (372)
T ss_dssp             CSEEEECCCCCTT------TTTTSCHHHHH-------HHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBC
T ss_pred             CCEEEECCcccCc------cccccCHHHHH-------HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCC
Confidence            7999999996432      11223333333       7899999999999999998   89999999865432       


Q ss_pred             -CCCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch-------h----hhhccCCcc-cc---CCc
Q 046297          218 -NHPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI-------R----ELLVGKDDE-LL---QTE  277 (331)
Q Consensus       218 -~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~-------~----~~~~~~~~~-~~---~~~  277 (331)
                       ..+..  +.+.|+.+|..+|.+++    +++++++++|++++||+....       .    ....+.... ..   +..
T Consensus       146 E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  223 (372)
T 1db3_A          146 ETTPFY--PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSL  223 (372)
T ss_dssp             TTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCE
T ss_pred             ccCCCC--CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCce
Confidence             22222  23679999999998876    358999999999999986321       1    112233222 22   344


Q ss_pred             ccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          278 TRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++|++|+|++++.+++++.  +++||+++   ++.+|+.|+++.+.+.+|+
T Consensus       224 ~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~---~~~~s~~e~~~~i~~~~g~  271 (372)
T 1db3_A          224 RDWGHAKDYVKMQWMMLQQEQ--PEDFVIAT---GVQYSVRQFVEMAAAQLGI  271 (372)
T ss_dssp             ECCEEHHHHHHHHHHTTSSSS--CCCEEECC---CCCEEHHHHHHHHHHTTTE
T ss_pred             eeeeEHHHHHHHHHHHHhcCC--CceEEEcC---CCceeHHHHHHHHHHHhCC
Confidence            789999999999999998764  46899999   8999999999999998874

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=2e-30  Score=237.52  Aligned_cols=220  Identities=16%  Similarity=0.182  Sum_probs=173.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhc-----CCCCcEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKI-----GGADDLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l-----~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      .+|+||||||+|+||++++++|++++ |+ +|++++|++.+...+     ..++.++.+|++|.+.+.++++++|+|||+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTT-NAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHC-CCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhC-CCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            46899999999999999999999973 66 999999987654432     246889999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR  234 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~  234 (331)
                      ||.....      ....+|..       ..++|+.++.+++++|++.++++||++||..++.+        .+.|+.+|.
T Consensus        99 Aa~~~~~------~~~~~~~~-------~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p--------~~~Y~~sK~  157 (344)
T 2gn4_A           99 AALKHVP------IAEYNPLE-------CIKTNIMGASNVINACLKNAISQVIALSTDKAANP--------INLYGATKL  157 (344)
T ss_dssp             CCCCCHH------HHHHSHHH-------HHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC--------CSHHHHHHH
T ss_pred             CCCCCCC------chhcCHHH-------HHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC--------ccHHHHHHH
Confidence            9964310      00112233       34899999999999999999999999999765432        256999999


Q ss_pred             HHHHHHHh-------cCCCEEEEecCcccCCCcchhh-----hhccC-CccccC--CcccccCHHHHHHHHHHHhcCccc
Q 046297          235 KAEQYLAD-------SGIPYTIIRAGGLQDKEGGIRE-----LLVGK-DDELLQ--TETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       235 ~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~~-----~~~~~-~~~~~~--~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                      .+|.+++.       .+++++++|||++||+......     ...+. ...+.+  ..+.+++++|+|++++.+++++. 
T Consensus       158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~-  236 (344)
T 2gn4_A          158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH-  236 (344)
T ss_dssp             HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc-
Confidence            99999874       4699999999999998765322     22343 333332  33678999999999999998763 


Q ss_pred             CCceEEeccCCCCCCCCHHHHHHHHHHh
Q 046297          300 KFKAFDLASKPEGTGTPTKDFKALFSQI  327 (331)
Q Consensus       300 ~~~~~~i~~~~~~~~~t~~e~~~~~~~~  327 (331)
                      .|++|++.+   + .+++.|+++.+.+.
T Consensus       237 ~g~~~~~~~---~-~~s~~el~~~i~~~  260 (344)
T 2gn4_A          237 GGEIFVPKI---P-SMKMTDLAKALAPN  260 (344)
T ss_dssp             SSCEEEECC---C-EEEHHHHHHHHCTT
T ss_pred             CCCEEecCC---C-cEEHHHHHHHHHHh
Confidence            578999886   4 59999999998754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.97  E-value=1.1e-29  Score=232.39  Aligned_cols=226  Identities=15%  Similarity=0.098  Sum_probs=169.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----hhhc--CCCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----KQKI--GGADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----~~~l--~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      .+.+|+||||||+||||++|+++|+++  |++|++++|+...    ...+  ..+++++.+|+.|..     +.++|+||
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vi   96 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQIY   96 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEE
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCEEE
Confidence            345789999999999999999999999  9999999997532    1222  235789999998764     57899999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--C---------C
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--P---------L  221 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~---------~  221 (331)
                      |+|+.....      ....+|+..+       ++|+.++.+++++|++.++ +||++||.+++....  +         .
T Consensus        97 h~A~~~~~~------~~~~~~~~~~-------~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~  162 (343)
T 2b69_A           97 HLASPASPP------NYMYNPIKTL-------KTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVN  162 (343)
T ss_dssp             ECCSCCSHH------HHTTCHHHHH-------HHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCC
T ss_pred             ECccccCch------hhhhCHHHHH-------HHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCC
Confidence            999963321      0012233333       8899999999999999887 999999986643211  1         0


Q ss_pred             CCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------hhhhhccCCccccC---CcccccCHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------IRELLVGKDDELLQ---TETRTIARA  284 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------~~~~~~~~~~~~~~---~~~~~i~v~  284 (331)
                      +....+.|+.+|..+|.+++    +.+++++++||+++||+...          ......+....+++   ..+++++++
T Consensus       163 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  242 (343)
T 2b69_A          163 PIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS  242 (343)
T ss_dssp             SSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHH
Confidence            11123679999999998875    46999999999999998632          12233444443332   347899999


Q ss_pred             HHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          285 DVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       285 Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |+|++++.+++.+.  +++||+++   ++.+|+.|+++.+.+++|+
T Consensus       243 Dva~a~~~~~~~~~--~~~~~i~~---~~~~s~~e~~~~i~~~~g~  283 (343)
T 2b69_A          243 DLVNGLVALMNSNV--SSPVNLGN---PEEHTILEFAQLIKNLVGS  283 (343)
T ss_dssp             HHHHHHHHHHTSSC--CSCEEESC---CCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcCC--CCeEEecC---CCCCcHHHHHHHHHHHhCC
Confidence            99999999997653  56999999   8899999999999999874

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=5.8e-30  Score=236.99  Aligned_cols=226  Identities=19%  Similarity=0.193  Sum_probs=173.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-----hhhc--------CCCCcEEEccCCCcccHHHHhcC--
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-----KQKI--------GGADDLFIGDIRDSNSIIPAIQG--  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~l--------~~~~~~v~~Dl~d~~~~~~~l~~--  147 (331)
                      ++||||||+||||++|+++|+++  |++|++++|+++.     .+.+        ..+++++.+|+.|++.+.+++++  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  102 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK  102 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             cEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence            68999999999999999999999  9999999998643     2222        23578899999999999999985  


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC---CeEEEEccCCCCCC-------
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA---KQIVLVGSMGGTNL-------  217 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---k~~v~~SS~~~~~~-------  217 (331)
                      +|+|||+||.....      ....+++.       ..++|+.++.+++++|++.++   ++||++||..++..       
T Consensus       103 ~d~vih~A~~~~~~------~~~~~~~~-------~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~  169 (375)
T 1t2a_A          103 PTEIYNLGAQSHVK------ISFDLAEY-------TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQK  169 (375)
T ss_dssp             CSEEEECCSCCCHH------HHHHSHHH-------HHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBC
T ss_pred             CCEEEECCCccccc------ccccCHHH-------HHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCC
Confidence            69999999963210      00112233       338899999999999999988   89999999876532       


Q ss_pred             -CCCCCCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcc--h-----h----hhhccCCcc-cc---CCc
Q 046297          218 -NHPLNSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGG--I-----R----ELLVGKDDE-LL---QTE  277 (331)
Q Consensus       218 -~~~~~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~--~-----~----~~~~~~~~~-~~---~~~  277 (331)
                       +.+..  +.+.|+.+|..+|.+++.    ++++++++||+++||+...  +     .    ....+.... ..   +..
T Consensus       170 E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  247 (375)
T 1t2a_A          170 ETTPFY--PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK  247 (375)
T ss_dssp             TTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCE
T ss_pred             ccCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCce
Confidence             22222  236799999999988763    5899999999999998532  1     1    112343221 22   234


Q ss_pred             ccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          278 TRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++|++|+|++++.+++++.  +++||+++   ++.+|+.|+++.+.+++|+
T Consensus       248 ~~~i~v~Dva~a~~~~~~~~~--~~~~ni~~---~~~~s~~e~~~~i~~~~g~  295 (375)
T 1t2a_A          248 RDWGHAKDYVEAMWLMLQNDE--PEDFVIAT---GEVHSVREFVEKSFLHIGK  295 (375)
T ss_dssp             ECCEEHHHHHHHHHHHHHSSS--CCCEEECC---SCCEEHHHHHHHHHHHTTC
T ss_pred             eeeEEHHHHHHHHHHHHhcCC--CceEEEeC---CCcccHHHHHHHHHHHhCC
Confidence            789999999999999998764  36899999   8899999999999998874

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.97  E-value=5.4e-30  Score=231.21  Aligned_cols=217  Identities=18%  Similarity=0.232  Sum_probs=166.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-----hhhh---c-CCCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-----SKQK---I-GGADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-----~~~~---l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      +|+||||||||+||++++++|+++  |++|++++|+..     +...   + ..+++++.+|+.|++++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence            578999999999999999999999  999999999853     2221   2 3468999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCCC---CCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLNH---PLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~~---~~~~~~~~~  228 (331)
                      |+++....                        ..|+.++.+++++|++.| +++||+ |+.+. +...   +..+ ....
T Consensus        82 ~~a~~~~~------------------------~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~-~~~~~~~~~~p-~~~~  134 (313)
T 1qyd_A           82 SALAGGVL------------------------SHHILEQLKLVEAIKEAGNIKRFLP-SEFGM-DPDIMEHALQP-GSIT  134 (313)
T ss_dssp             ECCCCSSS------------------------STTTTTHHHHHHHHHHSCCCSEEEC-SCCSS-CTTSCCCCCSS-TTHH
T ss_pred             ECCccccc------------------------hhhHHHHHHHHHHHHhcCCCceEEe-cCCcC-CccccccCCCC-Ccch
Confidence            99986321                        225667899999999999 999986 54442 2221   1111 1245


Q ss_pred             HHHHHHHHHHHHHhcCCCEEEEecCcccCCCcc-hhhh-----hccCCcccc---CCcccccCHHHHHHHHHHHhcCccc
Q 046297          229 ILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG-IREL-----LVGKDDELL---QTETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       229 y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~-~~~~-----~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                      | .+|..+|+++++.+++++++||++++++... +...     ..+....++   +..+++++++|+|++++.++.++..
T Consensus       135 y-~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~  213 (313)
T 1qyd_A          135 F-IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT  213 (313)
T ss_dssp             H-HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG
T ss_pred             H-HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc
Confidence            7 9999999999999999999999999875321 1110     111122222   2347899999999999999998876


Q ss_pred             CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          300 KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       300 ~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .+++|++.++  ++.+|+.|+++.+++++|+
T Consensus       214 ~~~~~~~~g~--~~~~s~~e~~~~~~~~~g~  242 (313)
T 1qyd_A          214 LNKTMYIRPP--MNILSQKEVIQIWERLSEQ  242 (313)
T ss_dssp             SSSEEECCCG--GGEEEHHHHHHHHHHHHTC
T ss_pred             CCceEEEeCC--CCccCHHHHHHHHHHhcCC
Confidence            6788888751  3689999999999999885

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.97  E-value=4.5e-30  Score=234.33  Aligned_cols=227  Identities=19%  Similarity=0.184  Sum_probs=163.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh------hc--CCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ------KI--GGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~------~l--~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      +|+||||||+||||++|+++|+++  ||+|+++.|+.++..      .+  ..+++++++|++|++.+.++++++|+|||
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   86 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH   86 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence            578999999999999999999999  999999999765321      12  23578899999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCC------------CCCCCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGG------------TNLNHP  220 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~------------~~~~~~  220 (331)
                      +|+....        ...+|..      ...++|+.++.+++++|++.+ +++||++||..+            .+|..+
T Consensus        87 ~A~~~~~--------~~~~~~~------~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~  152 (338)
T 2rh8_A           87 VATPVHF--------ASEDPEN------DMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNW  152 (338)
T ss_dssp             ESSCCCC-----------------------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTT
T ss_pred             eCCccCC--------CCCCcHH------HHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhc
Confidence            9985311        1112221      234889999999999999986 999999999752            112111


Q ss_pred             CC-----CC--CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch--hh-------hhccCCcccc------
Q 046297          221 LN-----SL--GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI--RE-------LLVGKDDELL------  274 (331)
Q Consensus       221 ~~-----~~--~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~--~~-------~~~~~~~~~~------  274 (331)
                      ..     +.  ....|+.+|..+|.++.    +++++++++||+++||+....  ..       .+.+....+.      
T Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  232 (338)
T 2rh8_A          153 TDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQ  232 (338)
T ss_dssp             TCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             cchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccc
Confidence            00     00  00148899999888764    368999999999999986421  00       1223221111      


Q ss_pred             --CCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          275 --QTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       275 --~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                        ...++++|++|+|++++.+++++... ..|++++    ..+++.|+++.+.+..+
T Consensus       233 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~~----~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          233 MLSGSVSIAHVEDVCRAHIFVAEKESAS-GRYICCA----ANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HHHSSEEEEEHHHHHHHHHHHHHCTTCC-EEEEECS----EEECHHHHHHHHHHHCT
T ss_pred             cccCcccEEEHHHHHHHHHHHHcCCCcC-CcEEEec----CCCCHHHHHHHHHHhCC
Confidence              11237999999999999999876543 4688875    45899999999988754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.97  E-value=8e-30  Score=230.54  Aligned_cols=225  Identities=15%  Similarity=0.178  Sum_probs=171.3

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPKM  161 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~~  161 (331)
                      +||||||+||||++++++|+++..|++|++++|+.....    ++.++.+|+.|++.+.++++  ++|+|||+|+.....
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~   76 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAK   76 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCc
Confidence            489999999999999999998733799999999765432    47899999999999999998  899999999863210


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC---C----CCCCcchHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP---L----NSLGNGNILVWKR  234 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~---~----~~~~~~~y~~sK~  234 (331)
                             ...+++..+       ++|+.++.+++++|++.++++||++||..++....+   .    ...+.+.|+.+|.
T Consensus        77 -------~~~~~~~~~-------~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~  142 (317)
T 3ajr_A           77 -------GEKDPALAY-------KVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKI  142 (317)
T ss_dssp             -------HHHCHHHHH-------HHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHH
T ss_pred             -------cccChHHHh-------hhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHH
Confidence                   011233333       889999999999999999999999999876543211   1    1112368999999


Q ss_pred             HHHHHHH----hcCCCEEEEecCcccCCCcc------------hhhhhccCCcccc---CCcccccCHHHHHHHHHHHhc
Q 046297          235 KAEQYLA----DSGIPYTIIRAGGLQDKEGG------------IRELLVGKDDELL---QTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       235 ~~e~~~~----~~~~~~~ilrp~~v~g~~~~------------~~~~~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~  295 (331)
                      .+|.+++    +++++++++||+++||+...            +...+.+.....+   +..++++|++|+|++++.+++
T Consensus       143 ~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  222 (317)
T 3ajr_A          143 AAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE  222 (317)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHh
Confidence            9998775    46899999999999996421            1122222322222   345789999999999999998


Q ss_pred             Cccc---CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          296 FEEA---KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       296 ~~~~---~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++..   .+++||+++    ..+++.|+++.+.+.+|+
T Consensus       223 ~~~~~~~~g~~~~i~~----~~~s~~e~~~~i~~~~~~  256 (317)
T 3ajr_A          223 ADRDKLVLRNGYNVTA----YTFTPSELYSKIKERIPE  256 (317)
T ss_dssp             CCGGGCSSCSCEECCS----EEECHHHHHHHHHTTCCS
T ss_pred             CCccccccCceEecCC----ccccHHHHHHHHHHHCCc
Confidence            7643   357999986    469999999999988763

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.97  E-value=1.1e-29  Score=227.87  Aligned_cols=219  Identities=16%  Similarity=0.081  Sum_probs=154.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMK  162 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~  162 (331)
                      |||||||||||||++|+++|+++  ||+|++++|++...        -+..|    +...+.++++|+|||+|+......
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~~~~--------~~~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKPGPG--------RITWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTT--------EEEHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCcC--------eeecc----hhhHhhccCCCEEEEeccCcccch
Confidence            68999999999999999999999  99999999986531        12222    233456789999999998521110


Q ss_pred             CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC--eEEEEccCCCCCC--------CCCCCCCCcchHHHH
Q 046297          163 PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK--QIVLVGSMGGTNL--------NHPLNSLGNGNILVW  232 (331)
Q Consensus       163 ~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk--~~v~~SS~~~~~~--------~~~~~~~~~~~y~~s  232 (331)
                             ...+...  ......+.|+.++.++++++++.+++  +||+.||.+++..        +.|..+.  +.|...
T Consensus        67 -------~~~~~~~--~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~--~~~~~~  135 (298)
T 4b4o_A           67 -------LRRWNET--FQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF--DFFSNL  135 (298)
T ss_dssp             -------TSCCCHH--HHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS--SHHHHH
T ss_pred             -------hhhhhhh--hhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc--chhHHH
Confidence                   0111100  01122367899999999999988765  5888888765432        2222222  334455


Q ss_pred             HHHHHHH--HHhcCCCEEEEecCcccCCCcchhhh-----hccCCccc--cCCcccccCHHHHHHHHHHHhcCcccCCce
Q 046297          233 KRKAEQY--LADSGIPYTIIRAGGLQDKEGGIREL-----LVGKDDEL--LQTETRTIARADVAEVCIQALQFEEAKFKA  303 (331)
Q Consensus       233 K~~~e~~--~~~~~~~~~ilrp~~v~g~~~~~~~~-----~~~~~~~~--~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~  303 (331)
                      +...|..  ....+++++++||+.+||+.+.....     ..+....+  .+..++|||++|+|++++.+++++...+ +
T Consensus       136 ~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g-~  214 (298)
T 4b4o_A          136 VTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHG-V  214 (298)
T ss_dssp             HHHHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCE-E
T ss_pred             HHHHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCC-e
Confidence            5444443  34578999999999999998653221     12222222  2345889999999999999999887654 9


Q ss_pred             EEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          304 FDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       304 ~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ||+++   ++++|+.|+++.+++++||
T Consensus       215 yn~~~---~~~~t~~e~~~~ia~~lgr  238 (298)
T 4b4o_A          215 LNGVA---PSSATNAEFAQTFGAALGR  238 (298)
T ss_dssp             EEESC---SCCCBHHHHHHHHHHHHTC
T ss_pred             EEEEC---CCccCHHHHHHHHHHHhCc
Confidence            99999   8999999999999999885

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.97  E-value=1.4e-29  Score=231.04  Aligned_cols=228  Identities=19%  Similarity=0.189  Sum_probs=165.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh---hh---cC---CCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK---QK---IG---GADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~---~~---l~---~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      ++++||||||+||||++|+++|+++  ||+|++++|+.+..   ..   +.   .+++++.+|++|++.+.++++++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            3578999999999999999999999  99999999987532   11   22   13678999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCC----------CCC
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNL----------NHP  220 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~----------~~~  220 (331)
                      ||+|+....        ...+|..      ...++|+.++.+++++|++.+ +++||++||..++..          ..+
T Consensus        82 ih~A~~~~~--------~~~~~~~------~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~  147 (337)
T 2c29_D           82 FHVATPMDF--------ESKDPEN------EVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCW  147 (337)
T ss_dssp             EECCCCCCS--------SCSSHHH------HTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCC
T ss_pred             EEeccccCC--------CCCChHH------HHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccC
Confidence            999985311        0112211      134789999999999999887 899999999863211          110


Q ss_pred             CC-------CCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch--h----hh---hccCCcccc-CCccc
Q 046297          221 LN-------SLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI--R----EL---LVGKDDELL-QTETR  279 (331)
Q Consensus       221 ~~-------~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~--~----~~---~~~~~~~~~-~~~~~  279 (331)
                      ..       ....+.|+.+|..+|.++.    +++++++++||+++||+....  .    ..   +.+....+. .....
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  227 (337)
T 2c29_D          148 SDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQ  227 (337)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEE
T ss_pred             CchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCC
Confidence            00       0022469999999998764    469999999999999986421  1    11   222221111 11244


Q ss_pred             ccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          280 TIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ++|++|+|++++.+++++...+ .|++++    ..+++.|+++.+.+..+
T Consensus       228 ~i~v~Dva~a~~~~~~~~~~~~-~~~~~~----~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          228 FVHLDDLCNAHIYLFENPKAEG-RYICSS----HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCE-EEEECC----EEEEHHHHHHHHHHHCT
T ss_pred             EEEHHHHHHHHHHHhcCcccCc-eEEEeC----CCCCHHHHHHHHHHHCC
Confidence            8999999999999998764434 687764    45899999999988753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.96  E-value=1.3e-29  Score=243.95  Aligned_cols=223  Identities=15%  Similarity=0.163  Sum_probs=171.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-------------------hhcCCCCcEEEccCCCcccH
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-------------------QKIGGADDLFIGDIRDSNSI  141 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-------------------~~l~~~~~~v~~Dl~d~~~~  141 (331)
                      .+++|||||||||||++|+++|+++  |++|++++|++.+.                   .....+++++.+|+.|++.+
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  226 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  226 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence            3679999999999999999999888  99999999987631                   11245699999999998877


Q ss_pred             HHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC--C----
Q 046297          142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG--T----  215 (331)
Q Consensus       142 ~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~--~----  215 (331)
                      . ++.++|+|||+|+.....         .++       ....++|+.++.+++++|++ ++++|||+||.++  +    
T Consensus       227 ~-~~~~~D~Vih~Aa~~~~~---------~~~-------~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~  288 (508)
T 4f6l_B          227 V-LPENMDTIIHAGARTDHF---------GDD-------DEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDID  288 (508)
T ss_dssp             C-CSSCCSEEEECCCC------------------------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTT
T ss_pred             C-CccCCCEEEECCceecCC---------CCH-------HHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccC
Confidence            7 778999999999964321         122       33348899999999999998 7799999999876  1    


Q ss_pred             ------CCCCCCC-CCCcchHHHHHHHHHHHHHh---cCCCEEEEecCcccCCCcch-----------hhhh----ccCC
Q 046297          216 ------NLNHPLN-SLGNGNILVWKRKAEQYLAD---SGIPYTIIRAGGLQDKEGGI-----------RELL----VGKD  270 (331)
Q Consensus       216 ------~~~~~~~-~~~~~~y~~sK~~~e~~~~~---~~~~~~ilrp~~v~g~~~~~-----------~~~~----~~~~  270 (331)
                            .+..+.. ....+.|+.+|+.+|+++++   .|++++++||+++||+....           ..++    ....
T Consensus       289 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~  368 (508)
T 4f6l_B          289 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDC  368 (508)
T ss_dssp             CSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSE
T ss_pred             CcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCC
Confidence                  1111110 11347899999999998875   79999999999999986431           1111    1111


Q ss_pred             ccc--cCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHh
Q 046297          271 DEL--LQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQI  327 (331)
Q Consensus       271 ~~~--~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~  327 (331)
                      ...  .+..+++++++|+|++++.++.++. .+++||+++   ++.+++.|+++.+.+.
T Consensus       369 ~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~---~~~~s~~el~~~i~~~  423 (508)
T 4f6l_B          369 IGVSMAEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLS---PNKMPVKSLLECVKRK  423 (508)
T ss_dssp             EETTGGGSEEECEEHHHHHHHHHHHTTBCC-SCSEEEESC---SCEEEHHHHHHHHHSS
T ss_pred             CCCCccCceEEEEcHHHHHHHHHHHHhCCC-CCCEEEeCC---CCCCCHHHHHHHHHHc
Confidence            111  1455889999999999999998876 788999999   8999999999999864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.96  E-value=1.2e-29  Score=234.36  Aligned_cols=199  Identities=15%  Similarity=0.088  Sum_probs=164.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |+||||||+||||++|+++|+++  |+ +|++++|+                  .|++++.++++++|+|||+||.... 
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~------------------~d~~~l~~~~~~~d~Vih~a~~~~~-   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ------------------TKEEELESALLKADFIVHLAGVNRP-   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT------------------CCHHHHHHHHHHCSEEEECCCSBCT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC------------------CCHHHHHHHhccCCEEEECCcCCCC-
Confidence            57999999999999999999999  98 88777664                  6788899999999999999996432 


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYL  240 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~  240 (331)
                               .++...       .++|+.++.+++++|++.+++ +||++||.+++.         .+.|+.+|+.+|+++
T Consensus        60 ---------~~~~~~-------~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------~~~Y~~sK~~~E~~~  114 (369)
T 3st7_A           60 ---------EHDKEF-------SLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------DNPYGESKLQGEQLL  114 (369)
T ss_dssp             ---------TCSTTC-------SSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------CSHHHHHHHHHHHHH
T ss_pred             ---------CCHHHH-------HHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------CCCchHHHHHHHHHH
Confidence                     223333       388999999999999999988 999999998754         367999999999988


Q ss_pred             Hh----cCCCEEEEecCcccCCCcc-----h-----hhhhccCCcccc--CCcccccCHHHHHHHHHHHhcCcccC-Cce
Q 046297          241 AD----SGIPYTIIRAGGLQDKEGG-----I-----RELLVGKDDELL--QTETRTIARADVAEVCIQALQFEEAK-FKA  303 (331)
Q Consensus       241 ~~----~~~~~~ilrp~~v~g~~~~-----~-----~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~~~~~~-~~~  303 (331)
                      ++    .+++++++||+++||+...     +     .....+....+.  +..++++|++|+|++++.+++++... +++
T Consensus       115 ~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  194 (369)
T 3st7_A          115 REYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGV  194 (369)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTE
T ss_pred             HHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCce
Confidence            75    7999999999999998642     1     223334444433  34478999999999999999987654 789


Q ss_pred             EEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          304 FDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       304 ~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ||+++   ++.+|+.|+++.+.++.|+
T Consensus       195 ~~i~~---~~~~s~~e~~~~~~~~~g~  218 (369)
T 3st7_A          195 PTVPN---VFKVTLGEIVDLLYKFKQS  218 (369)
T ss_dssp             ECCSC---CEEEEHHHHHHHHHHHHHH
T ss_pred             EEeCC---CCceeHHHHHHHHHHHhCC
Confidence            99998   8999999999999998774

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=4.4e-29  Score=224.63  Aligned_cols=214  Identities=19%  Similarity=0.204  Sum_probs=163.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-------chhhhc----CCCCcEEEccCCCcccHHHHhcCCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-------ESKQKI----GGADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-------~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      +++|+||||||+||++|+++|+++  |++|++++|++       ++...+    ..+++++.+|+.|++.+.++++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence            578999999999999999999999  99999999987       332221    24689999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCCCCCCCCC-cch
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLNHPLNSLG-NGN  228 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~~~~~~~~-~~~  228 (331)
                      |||+++..                            ++.++.+++++|++.| +++||+ |+.+. +........+ ...
T Consensus        80 vi~~a~~~----------------------------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~-~~~~~~~~~p~~~~  129 (307)
T 2gas_A           80 VICAAGRL----------------------------LIEDQVKIIKAIKEAGNVKKFFP-SEFGL-DVDRHDAVEPVRQV  129 (307)
T ss_dssp             EEECSSSS----------------------------CGGGHHHHHHHHHHHCCCSEEEC-SCCSS-CTTSCCCCTTHHHH
T ss_pred             EEECCccc----------------------------ccccHHHHHHHHHhcCCceEEee-ccccc-CcccccCCCcchhH
Confidence            99999852                            1345789999999998 999984 44432 2221111111 245


Q ss_pred             HHHHHHHHHHHHHhcCCCEEEEecCcccCCCcch-hhh----hccCCcccc---CCcccccCHHHHHHHHHHHhcCcccC
Q 046297          229 ILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGI-REL----LVGKDDELL---QTETRTIARADVAEVCIQALQFEEAK  300 (331)
Q Consensus       229 y~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~~-~~~----~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~~  300 (331)
                      | .+|..+|+++++.+++++++||++++++.... ...    ..+....++   +..+++++++|+|++++.++.++...
T Consensus       130 y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~  208 (307)
T 2gas_A          130 F-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTL  208 (307)
T ss_dssp             H-HHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGT
T ss_pred             H-HHHHHHHHHHHHcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcccc
Confidence            7 99999999999999999999999999865321 111    011111222   23478899999999999999987666


Q ss_pred             CceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          301 FKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       301 ~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++|++.++  ++.+|+.|+++++++++|+
T Consensus       209 ~~~~~~~~~--~~~~s~~e~~~~~~~~~g~  236 (307)
T 2gas_A          209 NKAVHIRLP--KNYLTQNEVIALWEKKIGK  236 (307)
T ss_dssp             TEEEECCCG--GGEEEHHHHHHHHHHHHTS
T ss_pred             CceEEEeCC--CCcCCHHHHHHHHHHHhCC
Confidence            788888751  3679999999999999885

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.96  E-value=1.5e-29  Score=234.66  Aligned_cols=226  Identities=19%  Similarity=0.169  Sum_probs=173.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-----hhhcC-------C-CCcEEEccCCCcccHHHHhcC--
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-----KQKIG-------G-ADDLFIGDIRDSNSIIPAIQG--  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~l~-------~-~~~~v~~Dl~d~~~~~~~l~~--  147 (331)
                      ++||||||+||||++|++.|+++  |++|++++|+.++     ...+.       . ++.++.+|+.|++.+.+++++  
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  106 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK  106 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence            68999999999999999999999  9999999998654     22221       1 578899999999999999985  


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-----eEEEEccCCCCCC-----
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-----QIVLVGSMGGTNL-----  217 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-----~~v~~SS~~~~~~-----  217 (331)
                      +|+|||+||.....      ....+++..       .++|+.++.+++++|++.+++     +||++||.+++..     
T Consensus       107 ~d~Vih~A~~~~~~------~~~~~~~~~-------~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~  173 (381)
T 1n7h_A          107 PDEVYNLAAQSHVA------VSFEIPDYT-------ADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQ  173 (381)
T ss_dssp             CSEEEECCSCCCHH------HHHHSHHHH-------HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSB
T ss_pred             CCEEEECCcccCcc------ccccCHHHH-------HHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCC
Confidence            69999999963210      001123333       388999999999999988776     9999999875432     


Q ss_pred             --CCCCCCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccCCCcch-------h----hhhccCCcc-cc---CC
Q 046297          218 --NHPLNSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQDKEGGI-------R----ELLVGKDDE-LL---QT  276 (331)
Q Consensus       218 --~~~~~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g~~~~~-------~----~~~~~~~~~-~~---~~  276 (331)
                        ..+..  +.+.|+.+|..+|.+++.    ++++++++|++++||+....       .    ....+.... ..   ..
T Consensus       174 ~E~~~~~--~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  251 (381)
T 1n7h_A          174 SETTPFH--PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQA  251 (381)
T ss_dssp             CTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTC
T ss_pred             CCCCCCC--CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCc
Confidence              22222  236799999999988764    48999999999999986421       1    122233222 12   23


Q ss_pred             cccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          277 ETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       277 ~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .+++++++|+|++++.+++++.  +++||+++   ++.+++.|+++.+.+.+|+
T Consensus       252 ~~~~v~v~Dva~a~~~~~~~~~--~~~~~i~~---~~~~s~~e~~~~i~~~~g~  300 (381)
T 1n7h_A          252 SRDWGFAGDYVEAMWLMLQQEK--PDDYVVAT---EEGHTVEEFLDVSFGYLGL  300 (381)
T ss_dssp             EEECEEHHHHHHHHHHHHTSSS--CCEEEECC---SCEEEHHHHHHHHHHHTTC
T ss_pred             eeeeEEHHHHHHHHHHHHhCCC--CCeEEeeC---CCCCcHHHHHHHHHHHcCC
Confidence            4789999999999999998764  46999999   8899999999999998874

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.96  E-value=1.8e-29  Score=230.73  Aligned_cols=231  Identities=14%  Similarity=0.118  Sum_probs=173.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC-------CeEEEEecCCchhhh-cCCCCcEEEccCCCcccHHHHhc-CCCE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ-------YAARGLVRTEESKQK-IGGADDLFIGDIRDSNSIIPAIQ-GIDA  150 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-------~~V~~l~R~~~~~~~-l~~~~~~v~~Dl~d~~~~~~~l~-~~d~  150 (331)
                      +.+|+||||||+||||++|+++|+++  |       ++|++++|+.++... ...++.++.+|+.|++.+.++++ ++|+
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~--g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKD--GSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHH--CEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhc--CCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            34678999999999999999999999  9       899999998654322 22347889999999999999994 8999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-----CCeEEEEccCCCCCCCCC--C--
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-----AKQIVLVGSMGGTNLNHP--L--  221 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-----vk~~v~~SS~~~~~~~~~--~--  221 (331)
                      |||+||.....       ...+++..       .++|+.++.+++++|++.+     +++||++||..++....+  .  
T Consensus        90 vih~A~~~~~~-------~~~~~~~~-------~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E  155 (342)
T 2hrz_A           90 IFHLAAIVSGE-------AELDFDKG-------YRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPD  155 (342)
T ss_dssp             EEECCCCCHHH-------HHHCHHHH-------HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCT
T ss_pred             EEECCccCccc-------ccccHHHH-------HHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCC
Confidence            99999963210       01123333       3889999999999999876     899999999876543211  1  


Q ss_pred             --CCCCcchHHHHHHHHHHHHHh----cCCCEEEEecCcccC-CCcc------h-----hhhhccCCccccC---Ccccc
Q 046297          222 --NSLGNGNILVWKRKAEQYLAD----SGIPYTIIRAGGLQD-KEGG------I-----RELLVGKDDELLQ---TETRT  280 (331)
Q Consensus       222 --~~~~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~v~g-~~~~------~-----~~~~~~~~~~~~~---~~~~~  280 (331)
                        ...+.+.|+.+|..+|.++++    .+++++++|++.+|| |...      +     .....+....++.   ...++
T Consensus       156 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (342)
T 2hrz_A          156 EFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWH  235 (342)
T ss_dssp             TCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEE
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceee
Confidence              111236799999999988764    478999999999998 4421      1     1122344333332   33567


Q ss_pred             cCHHHHHHHHHHHhcCccc---CCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          281 IARADVAEVCIQALQFEEA---KFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~~---~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++++|+|++++.+++.+..   .+++||++    ++.+|+.|+++.+.+.+|+
T Consensus       236 ~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~----g~~~s~~e~~~~i~~~~g~  284 (342)
T 2hrz_A          236 ASPRSAVGFLIHGAMIDVEKVGPRRNLSMP----GLSATVGEQIEALRKVAGE  284 (342)
T ss_dssp             ECHHHHHHHHHHHHHSCHHHHCSCCEEECC----CEEEEHHHHHHHHHHHHCH
T ss_pred             EehHHHHHHHHHHHhccccccCCccEEEcC----CCCCCHHHHHHHHHHHcCc
Confidence            8999999999999987643   46799995    4669999999999998774

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.96  E-value=4.2e-29  Score=247.44  Aligned_cols=232  Identities=13%  Similarity=0.140  Sum_probs=177.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCccc-HHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNS-IIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~-~~~~l~~~d~Vi~~ag~  157 (331)
                      .+|+||||||+||||++|+++|++++ |++|++++|++++...+.  .+++++.+|++|.++ +.++++++|+|||+||.
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~-g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~  392 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI  392 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSS-SEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcC-CCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence            46789999999999999999999963 799999999877655432  358899999999865 77788999999999996


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CCC---------C--C
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PLN---------S--L  224 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~~---------~--~  224 (331)
                      ....      ....+++.       ..++|+.++.+++++|++.+ ++||++||.+++....  +..         +  .
T Consensus       393 ~~~~------~~~~~~~~-------~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~  458 (660)
T 1z7e_A          393 ATPI------EYTRNPLR-------VFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  458 (660)
T ss_dssp             CCTH------HHHHSHHH-------HHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTC
T ss_pred             cCcc------ccccCHHH-------HHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccC
Confidence            3210      00112222       33789999999999999999 9999999986643211  110         0  1


Q ss_pred             CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------------hhhhhccCCccccC---Cccccc
Q 046297          225 GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------------IRELLVGKDDELLQ---TETRTI  281 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------------~~~~~~~~~~~~~~---~~~~~i  281 (331)
                      ..+.|+.+|+.+|.+++    +.+++++++||+++||+...                ......+....+.+   ..++++
T Consensus       459 p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i  538 (660)
T 1z7e_A          459 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT  538 (660)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECE
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEE
Confidence            22579999999998875    46899999999999998642                11223344433332   347899


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEeccCCCCC-CCCHHHHHHHHHHhhcc
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLASKPEGT-GTPTKDFKALFSQITTR  330 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~-~~t~~e~~~~~~~~~g~  330 (331)
                      |++|+|++++.+++++.  ..+++||+++   ++ .+|+.|+++.+.+.+|+
T Consensus       539 ~v~Dva~ai~~~l~~~~~~~~g~~~ni~~---~~~~~s~~el~~~i~~~~g~  587 (660)
T 1z7e_A          539 DIRDGIEALYRIIENAGNRCDGEIINIGN---PENEASIEELGEMLLASFEK  587 (660)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTTTEEEEECC---GGGEEEHHHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHhCccccCCCeEEEECC---CCCCcCHHHHHHHHHHHhcC
Confidence            99999999999998764  4678999998   76 89999999999988774

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.96  E-value=3.2e-30  Score=220.11  Aligned_cols=196  Identities=20%  Similarity=0.162  Sum_probs=155.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      +|+|+||||+|+||++++++|+++  |+  +|++++|++++   ...+++++.+|+.|++.+.+++  +|+|||++|...
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~--g~~~~V~~~~r~~~~---~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~   77 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALA---EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI   77 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCC---CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred             CceEEEECCCcHHHHHHHHHHHhC--CCCCeEEEEeCCCcc---cCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence            578999999999999999999999  88  99999998765   2345778899999998888887  999999998632


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQY  239 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~  239 (331)
                      ..        ..+++..+       ++|+.++.++++++++.++++||++||.+++..       +.+.|+.+|..+|++
T Consensus        78 ~~--------~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------~~~~y~~sK~~~e~~  135 (215)
T 2a35_A           78 KE--------AGSEEAFR-------AVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------SSIFYNRVKGELEQA  135 (215)
T ss_dssp             HH--------HSSHHHHH-------HHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------CSSHHHHHHHHHHHH
T ss_pred             cc--------CCCHHHHH-------HhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------CccHHHHHHHHHHHH
Confidence            10        11223333       789999999999999999999999999987542       125699999999999


Q ss_pred             HHhcCCC-EEEEecCcccCCCcc--hhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          240 LADSGIP-YTIIRAGGLQDKEGG--IRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       240 ~~~~~~~-~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      +++.+++ ++++||+++||+...  +...+.+....+.++.+++++++|+|++++.+++++.  +++|++++
T Consensus       136 ~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~  205 (215)
T 2a35_A          136 LQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG--KGVRFVES  205 (215)
T ss_dssp             HTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEH
T ss_pred             HHHcCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC--CCceEEcH
Confidence            9999999 999999999998754  2222222222222335788999999999999998875  67999998

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=1.1e-28  Score=218.14  Aligned_cols=202  Identities=20%  Similarity=0.177  Sum_probs=161.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      ++++||||||+|+||++++++|+++  |++|++++|++.+..  ..+++++.+|++|++++.++++++|+||||||... 
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~-   76 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPLDPA--GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISV-   76 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcC-
Confidence            3578999999999999999999999  999999999876543  45688999999999999999999999999999621 


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC---------CCCCCCCCCcchHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN---------LNHPLNSLGNGNILV  231 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~---------~~~~~~~~~~~~y~~  231 (331)
                               ..+++..+       ++|+.++.++++++++.++++||++||..++.         +..+.  .+.+.|+.
T Consensus        77 ---------~~~~~~~~-------~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~--~~~~~Y~~  138 (267)
T 3rft_A           77 ---------EKPFEQIL-------QGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPA--RPDGLYGV  138 (267)
T ss_dssp             ---------CCCHHHHH-------HHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCC--CCCSHHHH
T ss_pred             ---------cCCHHHHH-------HHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCC--CCCChHHH
Confidence                     12233333       89999999999999999999999999986542         11222  22267999


Q ss_pred             HHHHHHHHHH----hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEec
Q 046297          232 WKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       232 sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~  307 (331)
                      +|..+|.+++    ++++++++|||+.++++....            ....+|++++|+++++..+++.+...+.++++.
T Consensus       139 sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~------------~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~  206 (267)
T 3rft_A          139 SKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY------------RMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGA  206 (267)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST------------THHHHBCCHHHHHHHHHHHHHCSCCCSCEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC------------CceeeEEcHHHHHHHHHHHHhCCCCCceEEEEe
Confidence            9999998775    579999999999999874321            123567999999999999998887656678888


Q ss_pred             cCCCCCCCCHHHH
Q 046297          308 SKPEGTGTPTKDF  320 (331)
Q Consensus       308 ~~~~~~~~t~~e~  320 (331)
                      +   ++..++.++
T Consensus       207 s---~~~~~~~~~  216 (267)
T 3rft_A          207 S---ANDAGWWDN  216 (267)
T ss_dssp             C---CCTTCCBCC
T ss_pred             C---CCCCCcccC
Confidence            7   555555444

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.96  E-value=1.7e-28  Score=225.30  Aligned_cols=213  Identities=21%  Similarity=0.195  Sum_probs=166.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh--hhcC--CCCcEEEcc-CCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK--QKIG--GADDLFIGD-IRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~--~~l~--~~~~~v~~D-l~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +|+||||||||+||++|+++|+++  |++|++++|++++.  ..+.  .+++++.+| ++|++++.++++++|+|||+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~   82 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   82 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence            578999999999999999999999  99999999987654  3332  358899999 9999999999999999999987


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCCCCCCCCCcchHHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRK  235 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~  235 (331)
                      ....                        +.|..+ ++++++|++.| +++||++||..... ..+   .....|+.+|..
T Consensus        83 ~~~~------------------------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~-~~~---~~~~~y~~sK~~  133 (352)
T 1xgk_A           83 SQAG------------------------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSL-YGP---WPAVPMWAPKFT  133 (352)
T ss_dssp             STTS------------------------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGG-TSS---CCCCTTTHHHHH
T ss_pred             CCCc------------------------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccc-cCC---CCCccHHHHHHH
Confidence            4210                        336666 99999999999 99999999986211 111   112458899999


Q ss_pred             HHHHHHhcCCCEEEEecCcccCCCcch--hhh------hccCCc-cc---cCCcccccCH-HHHHHHHHHHhcCcc--cC
Q 046297          236 AEQYLADSGIPYTIIRAGGLQDKEGGI--REL------LVGKDD-EL---LQTETRTIAR-ADVAEVCIQALQFEE--AK  300 (331)
Q Consensus       236 ~e~~~~~~~~~~~ilrp~~v~g~~~~~--~~~------~~~~~~-~~---~~~~~~~i~v-~Dva~~~~~~l~~~~--~~  300 (331)
                      +|+++++.+++++++||+ +||+....  ...      ..+... .+   .+..++++++ +|+|++++.+++++.  ..
T Consensus       134 ~E~~~~~~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~  212 (352)
T 1xgk_A          134 VENYVRQLGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWN  212 (352)
T ss_dssp             HHHHHHTSSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHT
T ss_pred             HHHHHHHcCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhC
Confidence            999999999999999998 56654321  001      111110 11   2356789999 899999999998752  36


Q ss_pred             CceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          301 FKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       301 ~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++|++++    +.+|+.|+++.+.+++|+
T Consensus       213 g~~~~l~~----~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          213 GHRIALTF----ETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             TCEEEECS----EEECHHHHHHHHHHHHTS
T ss_pred             CeEEEEec----CCCCHHHHHHHHHHHHCC
Confidence            78999996    459999999999999885

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.96  E-value=4.3e-29  Score=224.83  Aligned_cols=214  Identities=20%  Similarity=0.269  Sum_probs=163.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch------hh---hc-CCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES------KQ---KI-GGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~------~~---~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      +++|+||||||+||+++++.|+++  |++|++++|+...      ..   .+ ..+++++.+|+.|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence            578999999999999999999999  9999999998532      11   12 346899999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCC-CCCCCCCCCCcchH
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGT-NLNHPLNSLGNGNI  229 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~-~~~~~~~~~~~~~y  229 (331)
                      ||+++..                            ++.++.+++++|+++| +++||+ |+.+.. ++..+..+. ...|
T Consensus        82 i~~a~~~----------------------------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~-~~~y  131 (308)
T 1qyc_A           82 ISTVGSL----------------------------QIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPA-KSVF  131 (308)
T ss_dssp             EECCCGG----------------------------GSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTH-HHHH
T ss_pred             EECCcch----------------------------hhhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcc-hhHH
Confidence            9999842                            2345789999999998 999985 554421 111111111 1457


Q ss_pred             HHHHHHHHHHHHhcCCCEEEEecCcccCCCcc-hhhh----hccCCcccc---CCcccccCHHHHHHHHHHHhcCcccCC
Q 046297          230 LVWKRKAEQYLADSGIPYTIIRAGGLQDKEGG-IREL----LVGKDDELL---QTETRTIARADVAEVCIQALQFEEAKF  301 (331)
Q Consensus       230 ~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~-~~~~----~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~~~  301 (331)
                       .+|..+|+++++.+++++++||++++++... +...    ..+....++   +..+++++++|+|++++.++.++...+
T Consensus       132 -~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~  210 (308)
T 1qyc_A          132 -EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN  210 (308)
T ss_dssp             -HHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTT
T ss_pred             -HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccC
Confidence             9999999999999999999999998875321 1110    111111222   234789999999999999998876667


Q ss_pred             ceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          302 KAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       302 ~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++|++.+.  ++.+|+.|+++++++++|+
T Consensus       211 ~~~~~~g~--~~~~s~~e~~~~~~~~~g~  237 (308)
T 1qyc_A          211 KTLYLRLP--ANTLSLNELVALWEKKIDK  237 (308)
T ss_dssp             EEEECCCG--GGEEEHHHHHHHHHHHTTS
T ss_pred             eEEEEeCC--CCccCHHHHHHHHHHHhCC
Confidence            88888751  3689999999999999885

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.96  E-value=1.3e-28  Score=245.64  Aligned_cols=233  Identities=18%  Similarity=0.168  Sum_probs=174.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh----hh---c-CCCCcEEEccCCCcccHHHHhc--CCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK----QK---I-GGADDLFIGDIRDSNSIIPAIQ--GID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~----~~---l-~~~~~~v~~Dl~d~~~~~~~l~--~~d  149 (331)
                      +.+|+||||||+||||++|+++|+++  |++|++++|+....    ..   + ..+++++.+|+.|++.+.++++  ++|
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D   86 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKID   86 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCC
Confidence            44689999999999999999999999  99999999975431    11   1 3468899999999999999998  899


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC------CCC--
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN------HPL--  221 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~------~~~--  221 (331)
                      +|||+||......      ...++..       ..++|+.++.+++++|++.++++||++||.+++...      .+.  
T Consensus        87 ~Vih~A~~~~~~~------~~~~~~~-------~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E  153 (699)
T 1z45_A           87 SVIHFAGLKAVGE------STQIPLR-------YYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPE  153 (699)
T ss_dssp             EEEECCSCCCHHH------HHHSHHH-------HHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             EEEECCcccCcCc------cccCHHH-------HHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccc
Confidence            9999999632100      0011222       348899999999999999999999999998764321      111  


Q ss_pred             --CCCCcchHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCc-------------chh----hhhccC--Ccccc
Q 046297          222 --NSLGNGNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEG-------------GIR----ELLVGK--DDELL  274 (331)
Q Consensus       222 --~~~~~~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~-------------~~~----~~~~~~--~~~~~  274 (331)
                        ...+.+.|+.+|..+|++++.      .+++++++||+++||+..             .+.    ....+.  ...++
T Consensus       154 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (699)
T 1z45_A          154 ECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIF  233 (699)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEe
Confidence              111236799999999998764      689999999999999742             111    112222  22222


Q ss_pred             C---------CcccccCHHHHHHHHHHHhcCc------ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          275 Q---------TETRTIARADVAEVCIQALQFE------EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       275 ~---------~~~~~i~v~Dva~~~~~~l~~~------~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +         ..+++||++|+|++++.+++..      ...+++||+++   ++.+++.|+++.+.+++|+
T Consensus       234 g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~---~~~~s~~el~~~i~~~~g~  301 (699)
T 1z45_A          234 GDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS---GKGSTVFEVYHAFCKASGI  301 (699)
T ss_dssp             ------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC---SCCEEHHHHHHHHHHHHTC
T ss_pred             CCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECC---CCCCcHHHHHHHHHHHhCC
Confidence            2         2378999999999999998742      22357999999   8899999999999998874

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.96  E-value=5.9e-29  Score=219.68  Aligned_cols=210  Identities=17%  Similarity=0.107  Sum_probs=163.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      +++||||||+|+||++|+++|+++  |++|++++|++.+.  +..++.++.+|++|++.+.++++++|+|||+||...  
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--   75 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDIVDLGA--AEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSV--   75 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCSSCCCC--CCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCS--
T ss_pred             CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCCCccc--cCCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCC--
Confidence            368999999999999999999999  99999999987542  224578899999999999999999999999999631  


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC---CC----CCCCcchHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH---PL----NSLGNGNILVWKR  234 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~---~~----~~~~~~~y~~sK~  234 (331)
                              ..+++..+       ++|+.++.++++++++.++++||++||..++....   +.    +..+.+.|+.+|.
T Consensus        76 --------~~~~~~~~-------~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~  140 (267)
T 3ay3_A           76 --------ERPWNDIL-------QANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKC  140 (267)
T ss_dssp             --------CCCHHHHH-------HHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHH
T ss_pred             --------CCCHHHHH-------HHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHH
Confidence                    11223333       78999999999999999999999999986543211   10    1112367999999


Q ss_pred             HHHHHHH----hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCC
Q 046297          235 KAEQYLA----DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKP  310 (331)
Q Consensus       235 ~~e~~~~----~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~  310 (331)
                      .+|.+++    +.+++++++||+++|+....            ....+++++++|+|++++.+++++...+++|++.+  
T Consensus       141 ~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~~------------~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~--  206 (267)
T 3ay3_A          141 FGEDLASLYYHKFDIETLNIRIGSCFPKPKD------------ARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGAS--  206 (267)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEEECBCSSSCCS------------HHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECC--
T ss_pred             HHHHHHHHHHHHcCCCEEEEeceeecCCCCC------------CCeeeccccHHHHHHHHHHHHhCCCCCceeEecCC--
Confidence            9998876    46899999999999853210            01235789999999999999988765557888887  


Q ss_pred             CCCCCCHHHHHHHHHHhhc
Q 046297          311 EGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       311 ~~~~~t~~e~~~~~~~~~g  329 (331)
                       +...++.++.++  +.+|
T Consensus       207 -~~~~~~~d~~~~--~~lg  222 (267)
T 3ay3_A          207 -ANTESWWDNDKS--AFLG  222 (267)
T ss_dssp             -SCSSCCBCCGGG--GGGC
T ss_pred             -CccccccCHHHH--HHcC
Confidence             666777776665  4444

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.96  E-value=9.5e-29  Score=224.00  Aligned_cols=214  Identities=15%  Similarity=0.132  Sum_probs=163.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-c-----hhhh---c-CCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-E-----SKQK---I-GGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~-----~~~~---l-~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      +|+|+||||||+||++++++|+++  |++|++++|++ .     +...   + ..+++++.+|+.|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~v   81 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIV   81 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence            578999999999999999999999  99999999986 2     2221   1 346899999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCC-CCCCCCCCCCcchH
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGT-NLNHPLNSLGNGNI  229 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~-~~~~~~~~~~~~~y  229 (331)
                      ||+++..                            .+.++.+++++|++.| +++||+ |+.+.. ++..+..+ ....|
T Consensus        82 i~~a~~~----------------------------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p-~~~~y  131 (321)
T 3c1o_A           82 ISALPFP----------------------------MISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPP-FESVL  131 (321)
T ss_dssp             EECCCGG----------------------------GSGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHH-HHHHH
T ss_pred             EECCCcc----------------------------chhhHHHHHHHHHHhCCccEEec-cccccCccccccCCC-cchHH
Confidence            9999842                            1345789999999999 999984 443321 11111111 02458


Q ss_pred             HHHHHHHHHHHHhcCCCEEEEecCcccCCCcch-hh----hhccCCcccc---CCcccccCHHHHHHHHHHHhcCcccCC
Q 046297          230 LVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGI-RE----LLVGKDDELL---QTETRTIARADVAEVCIQALQFEEAKF  301 (331)
Q Consensus       230 ~~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~~-~~----~~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~~~  301 (331)
                       .+|..+|+++++.++++++|||+.++++.... ..    ...+....++   +..+++++++|+|++++.++.++...+
T Consensus       132 -~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g  210 (321)
T 3c1o_A          132 -EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCN  210 (321)
T ss_dssp             -HHHHHHHHHHHHHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTT
T ss_pred             -HHHHHHHHHHHHcCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccC
Confidence             99999999999999999999999988753211 11    0111222222   234789999999999999999887667


Q ss_pred             ceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          302 KAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       302 ~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++|++.++  ++.+|+.|+++.+++++|+
T Consensus       211 ~~~~~~g~--~~~~t~~e~~~~~~~~~g~  237 (321)
T 3c1o_A          211 RIVIYRPP--KNIISQNELISLWEAKSGL  237 (321)
T ss_dssp             EEEECCCG--GGEEEHHHHHHHHHHHHTS
T ss_pred             eEEEEeCC--CCcccHHHHHHHHHHHcCC
Confidence            88888751  4789999999999999885

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.96  E-value=1.6e-28  Score=222.27  Aligned_cols=214  Identities=14%  Similarity=0.141  Sum_probs=162.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhh---c-CCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQK---I-GGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~---l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +++||||||||+||++++++|+++  |++|++++|+++ +...   + ..+++++.+|+.|++++.++++++|+|||+++
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~   88 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA   88 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            358999999999999999999999  999999999875 2221   1 34689999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCC-CCCCCCCCCCcchHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGT-NLNHPLNSLGNGNILVWKR  234 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~-~~~~~~~~~~~~~y~~sK~  234 (331)
                      ..                            ++.++.+++++|++.| +++||+ |+.+.. ++..+..+ ....| .+|.
T Consensus        89 ~~----------------------------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p-~~~~y-~sK~  137 (318)
T 2r6j_A           89 FP----------------------------QILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPP-FEALI-ERKR  137 (318)
T ss_dssp             GG----------------------------GSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHH-HHHHH-HHHH
T ss_pred             hh----------------------------hhHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCC-cchhH-HHHH
Confidence            42                            2345789999999998 999985 544421 11111111 01357 9999


Q ss_pred             HHHHHHHhcCCCEEEEecCcccCCCcc-hhhh-hccCCcccc---CCcccccCHHHHHHHHHHHhcCcccCCceEEeccC
Q 046297          235 KAEQYLADSGIPYTIIRAGGLQDKEGG-IREL-LVGKDDELL---QTETRTIARADVAEVCIQALQFEEAKFKAFDLASK  309 (331)
Q Consensus       235 ~~e~~~~~~~~~~~ilrp~~v~g~~~~-~~~~-~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~  309 (331)
                      .+|+++++.+++++++||+.++++... +... ..+....++   +..+++++++|+|++++.++.++...+++|++.+.
T Consensus       138 ~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~  217 (318)
T 2r6j_A          138 MIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPS  217 (318)
T ss_dssp             HHHHHHHHTTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCG
T ss_pred             HHHHHHHhcCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCC
Confidence            999999999999999999988765211 1111 112222222   23578999999999999999987666778888641


Q ss_pred             CCCCCCCHHHHHHHHHHhhcc
Q 046297          310 PEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       310 ~~~~~~t~~e~~~~~~~~~g~  330 (331)
                        ++.+|+.|+++.+++++|+
T Consensus       218 --~~~~s~~e~~~~~~~~~g~  236 (318)
T 2r6j_A          218 --TNIITQLELISRWEKKIGK  236 (318)
T ss_dssp             --GGEEEHHHHHHHHHHHHTC
T ss_pred             --CCccCHHHHHHHHHHHhCC
Confidence              4789999999999999885

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.96  E-value=3e-28  Score=211.83  Aligned_cols=202  Identities=19%  Similarity=0.173  Sum_probs=156.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +.+|+||||||+|+||++++++|+++  |+  +|++++|++++.... ...+.++.+|++|++++.++++++|+||||||
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag   93 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLG   93 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcC--CCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCC
Confidence            45689999999999999999999999  99  999999987654432 23588999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKA  236 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~  236 (331)
                      .....         .+++.       ..++|+.++.++++++++.++++||++||.+++...       ...|+.+|+.+
T Consensus        94 ~~~~~---------~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-------~~~Y~~sK~~~  150 (242)
T 2bka_A           94 TTRGK---------AGAEG-------FVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS-------NFLYLQVKGEV  150 (242)
T ss_dssp             CCHHH---------HHHHH-------HHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-------SSHHHHHHHHH
T ss_pred             ccccc---------CCccc-------ceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC-------cchHHHHHHHH
Confidence            63210         01122       237899999999999999999999999999876421       24699999999


Q ss_pred             HHHHHhcCCC-EEEEecCcccCCCcch--hhh----hccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          237 EQYLADSGIP-YTIIRAGGLQDKEGGI--REL----LVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       237 e~~~~~~~~~-~~ilrp~~v~g~~~~~--~~~----~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      |.+++..+++ +++||||+++|+....  ...    ..+..... .....+++++|+|++++.++.++... ..+.+.+
T Consensus       151 e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~  227 (242)
T 2bka_A          151 EAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDS-WASGHSVPVVTVVRAMLNNVVRPRDK-QMELLEN  227 (242)
T ss_dssp             HHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTT-GGGGTEEEHHHHHHHHHHHHTSCCCS-SEEEEEH
T ss_pred             HHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCcc-ccCCcccCHHHHHHHHHHHHhCcccc-CeeEeeH
Confidence            9999999995 9999999999986421  111    11111111 11235799999999999999887653 3666665

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=1.1e-27  Score=207.71  Aligned_cols=197  Identities=23%  Similarity=0.244  Sum_probs=148.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .+.+|+||||||+|+||++|+++|+++  | ++|++++|++++...+. .+++++++|++|++++.++++++|+||||+|
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~   97 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLT   97 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECC
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCC
Confidence            345788999999999999999999999  8 99999999988766543 4688999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCC----CCCCcchHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL----NSLGNGNILVW  232 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~----~~~~~~~y~~s  232 (331)
                      ...                           ....+++++++|++.++++||++||.+++......    .......+...
T Consensus        98 ~~~---------------------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~  150 (236)
T 3qvo_A           98 GED---------------------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKP  150 (236)
T ss_dssp             STT---------------------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHH
T ss_pred             CCc---------------------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHH
Confidence            411                           12457899999999999999999998875432211    00001123455


Q ss_pred             HHHHHHHHHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc-cCCceEEecc
Q 046297          233 KRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE-AKFKAFDLAS  308 (331)
Q Consensus       233 K~~~e~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~i~~  308 (331)
                      +..+|+++++.++++++||||+++++........... .   .....+++++|||++++.++.++. ..+++|++++
T Consensus       151 ~~~~~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~~~-~---~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~  223 (236)
T 3qvo_A          151 FRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRN-E---PFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQ  223 (236)
T ss_dssp             HHHHHHHHHTSCSEEEEEEECEEECCSCCCCEEECTT-S---CCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEEC
T ss_pred             HHHHHHHHHHCCCCEEEEeCCcccCCCCcceEEeccC-C---CCCCcEECHHHHHHHHHHHHcCcccccCeeEEecC
Confidence            6777888899999999999999998754321111111 0   011347899999999999999886 6789999997

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=9.8e-28  Score=205.93  Aligned_cols=192  Identities=14%  Similarity=0.099  Sum_probs=151.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHH-hcCCCCeEEEEecCCc-hhhhc---CCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLK-ERSEQYAARGLVRTEE-SKQKI---GGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll-~~~~g~~V~~l~R~~~-~~~~l---~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +++||||||+|+||++++++|+ ++  |++|++++|+++ +.+++   ..++.++.+|++|++++.++++++|+||||+|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag   82 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM   82 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence            4569999999999999999999 78  999999999988 66654   35689999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCC-----CCCcchHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLN-----SLGNGNILV  231 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~-----~~~~~~y~~  231 (331)
                      .                            .|+. ++++++++++.++++||++||.+++.......     ....+.|..
T Consensus        83 ~----------------------------~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~  133 (221)
T 3r6d_A           83 E----------------------------SGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQ  133 (221)
T ss_dssp             C----------------------------CHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHH
T ss_pred             C----------------------------CChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHH
Confidence            4                            1555 89999999999999999999998765322100     000016999


Q ss_pred             HHHHHHHHHHhcCCCEEEEecCcccCCCcc-hhhhhccCCccccCCcccccCHHHHHHHHHHHh--cCcc-cCCceEEec
Q 046297          232 WKRKAEQYLADSGIPYTIIRAGGLQDKEGG-IRELLVGKDDELLQTETRTIARADVAEVCIQAL--QFEE-AKFKAFDLA  307 (331)
Q Consensus       232 sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l--~~~~-~~~~~~~i~  307 (331)
                      +|..+|+++++.+++|++||||+++++... ....... ..   .....+++.+|+|++++.++  .++. ..++.+.+.
T Consensus       134 ~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~-~~---~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~  209 (221)
T 3r6d_A          134 GERQARNVLRESNLNYTILRLTWLYNDPEXTDYELIPE-GA---QFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVG  209 (221)
T ss_dssp             HHHHHHHHHHHSCSEEEEEEECEEECCTTCCCCEEECT-TS---CCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEE
T ss_pred             HHHHHHHHHHhCCCCEEEEechhhcCCCCCcceeeccC-Cc---cCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeec
Confidence            999999999999999999999999987321 1111111 00   11123789999999999999  7765 667788888


Q ss_pred             c
Q 046297          308 S  308 (331)
Q Consensus       308 ~  308 (331)
                      +
T Consensus       210 ~  210 (221)
T 3r6d_A          210 E  210 (221)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.95  E-value=5.9e-28  Score=213.56  Aligned_cols=216  Identities=15%  Similarity=0.082  Sum_probs=164.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC--CCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG--IDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~ag~~~~  160 (331)
                      |+||||||+|+||++++++|+ +  |++|++++|+++..    .+   +.+|++|++.+.+++++  +|+|||+||....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-E--RHEVIKVYNSSEIQ----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-T--TSCEEEEESSSCCT----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHh-c--CCeEEEecCCCcCC----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            479999999999999999999 6  79999999987431    22   88999999999999986  9999999996321


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC-C----CCCCcchHHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP-L----NSLGNGNILVWKRK  235 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~-~----~~~~~~~y~~sK~~  235 (331)
                      .      ....+++.       ..++|+.++.+++++|++.++ +||++||..++..... .    ...+.+.|+.+|..
T Consensus        71 ~------~~~~~~~~-------~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~  136 (273)
T 2ggs_A           71 D------KCEIEKEK-------AYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLL  136 (273)
T ss_dssp             H------HHHHCHHH-------HHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHH
T ss_pred             h------hhhhCHHH-------HHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHH
Confidence            0      00112233       338899999999999999887 9999999876533211 0    11123679999999


Q ss_pred             HHHHHHhcCCCEEEEecCcccCCCcchhh----hhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCC
Q 046297          236 AEQYLADSGIPYTIIRAGGLQDKEGGIRE----LLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPE  311 (331)
Q Consensus       236 ~e~~~~~~~~~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~  311 (331)
                      +|.+++.  ++++++||+.+||+......    ...+....+.+..+++++++|+|++++.+++++.  +++||+++   
T Consensus       137 ~e~~~~~--~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~---  209 (273)
T 2ggs_A          137 GETFALQ--DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK--TGIIHVAG---  209 (273)
T ss_dssp             HHHHHCC--TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC--CEEEECCC---
T ss_pred             HHHHHhC--CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc--CCeEEECC---
Confidence            9999988  89999999999984322111    1233333333336789999999999999998764  44899985   


Q ss_pred             CCCCCHHHHHHHHHHhhcc
Q 046297          312 GTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       312 ~~~~t~~e~~~~~~~~~g~  330 (331)
                       +.+|+.|+++.+.+.+|+
T Consensus       210 -~~~s~~e~~~~~~~~~g~  227 (273)
T 2ggs_A          210 -ERISRFELALKIKEKFNL  227 (273)
T ss_dssp             -CCEEHHHHHHHHHHHTTC
T ss_pred             -CcccHHHHHHHHHHHhCC
Confidence             679999999999998874

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.95  E-value=4e-28  Score=233.79  Aligned_cols=222  Identities=18%  Similarity=0.176  Sum_probs=161.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      +|+||||||+||||++|++.|+++  ||+|++++|++.+.       ..+.+|+.+.  +.++++++|+|||+|+.....
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~~-------~~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~  215 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPKP-------GKRFWDPLNP--ASDLLDGADVLVHLAGEPIFG  215 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCCT-------TCEECCTTSC--CTTTTTTCSEEEECCCC----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCCc-------cceeecccch--hHHhcCCCCEEEECCCCcccc
Confidence            689999999999999999999999  99999999987653       3477888753  456778999999999964221


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH-HHHcCCCeEEEEccCCCCCCC------CCCCCCCcchHHHHHH
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA-AKAAGAKQIVLVGSMGGTNLN------HPLNSLGNGNILVWKR  234 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a-a~~~~vk~~v~~SS~~~~~~~------~~~~~~~~~~y~~sK~  234 (331)
                           .....+++.       ..++|+.++.+++++ +++.++++||++||.+++...      ....+...+.|+..|.
T Consensus       216 -----~~~~~~~~~-------~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~  283 (516)
T 3oh8_A          216 -----RFNDSHKEA-------IRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCR  283 (516)
T ss_dssp             ------CCGGGHHH-------HHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHH
T ss_pred             -----ccchhHHHH-------HHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHH
Confidence                 000111222       237899999999999 667789999999998765411      1111123467888888


Q ss_pred             HHHHHH---HhcCCCEEEEecCcccCCCcchhhhh-----ccCCcccc--CCcccccCHHHHHHHHHHHhcCcccCCceE
Q 046297          235 KAEQYL---ADSGIPYTIIRAGGLQDKEGGIRELL-----VGKDDELL--QTETRTIARADVAEVCIQALQFEEAKFKAF  304 (331)
Q Consensus       235 ~~e~~~---~~~~~~~~ilrp~~v~g~~~~~~~~~-----~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  304 (331)
                      ..|.++   ++.|++++++||+++||+.......+     .+....+.  +..+++||++|+|++++.+++++... .+|
T Consensus       284 ~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~-g~~  362 (516)
T 3oh8_A          284 DWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQIS-GPI  362 (516)
T ss_dssp             HHHHTTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCC-EEE
T ss_pred             HHHHHHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccC-CcE
Confidence            877543   46799999999999999986533222     12221121  23378999999999999999887654 489


Q ss_pred             EeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          305 DLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       305 ~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |+++   ++.+|+.|+++.+.+++|+
T Consensus       363 ni~~---~~~~s~~el~~~i~~~~g~  385 (516)
T 3oh8_A          363 NAVA---PNPVSNADMTKILATSMHR  385 (516)
T ss_dssp             EESC---SCCEEHHHHHHHTTC----
T ss_pred             EEEC---CCCCCHHHHHHHHHHHhCC
Confidence            9999   8999999999999988764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=3.9e-27  Score=209.07  Aligned_cols=233  Identities=12%  Similarity=0.032  Sum_probs=169.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCC--CCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGG--ADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~--~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+.+..+.    +..  ++.++.+|++|++++.++++       
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            34688999999999999999999999  9999999998755432    222  57899999999999988876       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||........+......+++       ..+++|+.++.++++++..    .+.++||++||..++....   
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~-------~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  161 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFK-------RVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---  161 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC---
Confidence            7999999999753221111111112222       2348899999888887765    4677999999987754332   


Q ss_pred             CCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchh-----hhhccCCccccCCcccccCHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                       .....|+.+|...|.+.+.       .+++++++|||+++++.....     ..........+.....+++++|+|+++
T Consensus       162 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (278)
T 2bgk_A          162 -GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV  240 (278)
T ss_dssp             -TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHH
Confidence             1225699999999877652       589999999999999853210     000000000111123578999999999


Q ss_pred             HHHhcCcc--cCCceEEeccCCCCCCCCHHHHHHHHHHhh
Q 046297          291 IQALQFEE--AKFKAFDLASKPEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~  328 (331)
                      +.++.++.  ..|+.|++.+   |...++.|+++.+.+++
T Consensus       241 ~~l~~~~~~~~~G~~~~v~g---g~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          241 AYLAGDESKYVSGLNLVIDG---GYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHHSGGGTTCCSCEEEEST---TGGGCCTHHHHHSCSCC
T ss_pred             HHHcCcccccCCCCEEEECC---cccccCCccchhhhhhc
Confidence            99997643  4588999998   88999999999887654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.94  E-value=2.3e-26  Score=204.65  Aligned_cols=228  Identities=15%  Similarity=0.097  Sum_probs=163.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|+.++.+++    ...+.++.+|++|++++.++++       ++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence            4688999999999999999999999  99999999998765543    3468899999999999988876       789


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +||||||.....  .+......+++.       .+++|+.+    ++.+++.+++.+.++||++||..+..+..+     
T Consensus        82 ~lv~~Ag~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  147 (281)
T 3m1a_A           82 VLVNNAGRTQVG--AFEETTERELRD-------LFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG-----  147 (281)
T ss_dssp             EEEECCCCEEEC--CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----
T ss_pred             EEEECCCcCCCC--ChhhCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC-----
Confidence            999999974321  111112222222       34889999    666667777788889999999877544332     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh---------h---h-ccCCccccCCcccccCHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE---------L---L-VGKDDELLQTETRTIARAD  285 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~---------~---~-~~~~~~~~~~~~~~i~v~D  285 (331)
                      ...|+.+|..+|.+.+       ..++++++++||++.++......         .   . ............++.+++|
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  227 (281)
T 3m1a_A          148 FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAK  227 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHH
Confidence            2579999999987765       26899999999999876422100         0   0 0000001122356789999


Q ss_pred             HHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhh
Q 046297          286 VAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       286 va~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~  328 (331)
                      +|++++.+++++.. +..|++++   +....+.+....+.+..
T Consensus       228 va~a~~~~~~~~~~-~~~~~l~s---~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          228 AAAAIRLALDTEKT-PLRLALGG---DAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             HHHHHHHHHHSSSC-CSEEEESH---HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCC-CeEEecCc---hHHHHHHHHHHHHHHHH
Confidence            99999999988754 56899998   66566666666555544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.6e-25  Score=198.85  Aligned_cols=231  Identities=13%  Similarity=0.070  Sum_probs=152.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------C---CCCcEEEccCCCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------G---GADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~---~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++       .   .++.++.+|++|++++.++++   
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            45688999999999999999999999  99999999987654432       1   236789999999999988887   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCC-CCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGG-TNL  217 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~-~~~  217 (331)
                          ++|+||||||.....  .+......   ...++....+++|+.++.++++++..    .+ ++||++||..+ ..+
T Consensus        82 ~~~g~id~lv~~Ag~~~~~--~~~~~~~~---~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~  155 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIPD--SQSKTGTA---QSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA  155 (278)
T ss_dssp             HHHSCCCEEEECCC------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC
T ss_pred             HHcCCCCEEEECCCCCCCc--cccccccc---CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC
Confidence                899999999974321  01111000   01111123348899998888877654    36 89999999876 443


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh-----------hccCCccccCCccc
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL-----------LVGKDDELLQTETR  279 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~  279 (331)
                      ..+     ...|+.+|..++.+.+       ..|+++++|+||++.++.......           ........+  ...
T Consensus       156 ~~~-----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~  228 (278)
T 1spx_A          156 TPD-----FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP--AGV  228 (278)
T ss_dssp             CTT-----SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT--TSS
T ss_pred             CCC-----ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC--CcC
Confidence            221     2569999999987765       368999999999999875321100           000000011  124


Q ss_pred             ccCHHHHHHHHHHHhcCcc---cCCceEEeccCCCCCCCCHHHHHHHHHHhh
Q 046297          280 TIARADVAEVCIQALQFEE---AKFKAFDLASKPEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~---~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~  328 (331)
                      +.+++|+|++++.++..+.   ..|++|++.+   |...++.|+++.+.+++
T Consensus       229 ~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdg---G~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          229 MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG---GSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST---TGGGC------------
T ss_pred             CCCHHHHHHHHHHHcCccccCcccCcEEEECC---CcccccCcccccHHHHh
Confidence            6899999999999987654   3589999998   88999999999998764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.93  E-value=2.6e-26  Score=200.79  Aligned_cols=210  Identities=13%  Similarity=0.120  Sum_probs=152.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc----CCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ----GIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~----~~d~Vi~~ag~  157 (331)
                      |++||||||+|+||++++++|+++  |++|++++|++++...      .+.+|++|++.+.++++    ++|+||||||.
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQADIEA------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhHccc------cccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            357999999999999999999999  9999999998765432      16789999999988886    89999999996


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----CCCeEEEEccCCCCCCCCCCC-----------
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----GAKQIVLVGSMGGTNLNHPLN-----------  222 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~vk~~v~~SS~~~~~~~~~~~-----------  222 (331)
                      ...         ..+++..+       ++|+.++.++++++.+.    +.++||++||..++.......           
T Consensus        73 ~~~---------~~~~~~~~-------~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  136 (255)
T 2dkn_A           73 GVT---------AANSGLVV-------AVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDE  136 (255)
T ss_dssp             CTT---------SSCHHHHH-------HHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCH
T ss_pred             CCc---------chhHHHHH-------HHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccch
Confidence            431         12234444       88999999999977654    678999999987654321000           


Q ss_pred             ----------CCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchh--hhhccCCcccc-CCcccccC
Q 046297          223 ----------SLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELL-QTETRTIA  282 (331)
Q Consensus       223 ----------~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~-~~~~~~i~  282 (331)
                                ......|+.+|..+|.+++.       .+++++++|||+++++.....  ....+...... +...++++
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T 2dkn_A          137 ARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSE  216 (255)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBC
T ss_pred             hhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCC
Confidence                      01236799999999987763       589999999999998753211  00000000000 02246899


Q ss_pred             HHHHHHHHHHHhcCc--ccCCceEEeccCCCCCCCCHH
Q 046297          283 RADVAEVCIQALQFE--EAKFKAFDLASKPEGTGTPTK  318 (331)
Q Consensus       283 v~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~~~t~~  318 (331)
                      ++|+|++++.++.++  ...|+.|++.+   |...++.
T Consensus       217 ~~dva~~~~~l~~~~~~~~~G~~~~v~g---g~~~~~~  251 (255)
T 2dkn_A          217 PREVAEAIAFLLGPQASFIHGSVLFVDG---GMDALMR  251 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEEST---THHHHHC
T ss_pred             HHHHHHHHHHHhCCCcccceeeEEEecC---CeEeeee
Confidence            999999999999876  34688999998   6555443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.93  E-value=4.3e-25  Score=193.36  Aligned_cols=212  Identities=13%  Similarity=0.090  Sum_probs=156.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+.+       ..++.++.+|++|++++.++++      
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999  99999999987654332       3457889999999999988876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||......  + ....+++       ...+++|+.++.++++++.    +.+.++||++||..++.+..+ 
T Consensus        87 ~~~d~vi~~Ag~~~~~~--~-~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  155 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKP--F-DMPMADF-------RRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN-  155 (255)
T ss_dssp             SSCCEEEECCCCCCCCC--T-TCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-
T ss_pred             CCCCEEEECCCCCCCCC--C-CCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC-
Confidence             8999999999743210  0 1111122       2334889999888887764    557789999999877544332 


Q ss_pred             CCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcch-------hhhhccCCccccCCcccccCHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGI-------RELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                          ...|+.+|...|.+.+.       .+++++++|||+++++....       .....+.    +  ...+.+++|+|
T Consensus       156 ----~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~dva  225 (255)
T 1fmc_A          156 ----MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT----P--IRRLGQPQDIA  225 (255)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTC----S--SCSCBCHHHHH
T ss_pred             ----CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcC----C--cccCCCHHHHH
Confidence                25799999999877652       48999999999999864210       0111111    1  13468999999


Q ss_pred             HHHHHHhcCcc--cCCceEEeccCCCCCCCCH
Q 046297          288 EVCIQALQFEE--AKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~  317 (331)
                      ++++.++.++.  ..|++|++.+   |...|+
T Consensus       226 ~~~~~l~~~~~~~~~G~~~~v~g---g~~~s~  254 (255)
T 1fmc_A          226 NAALFLCSPAASWVSGQILTVSG---GGVQEL  254 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST---TSCCCC
T ss_pred             HHHHHHhCCccccCCCcEEEECC---ceeccC
Confidence            99999997653  3588999998   777664

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.92  E-value=4.4e-24  Score=188.99  Aligned_cols=213  Identities=14%  Similarity=0.040  Sum_probs=156.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.++    +..++.++.+|++|++++.++++       ++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARA--GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999  9999999999876544    34568899999999999988886       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||........+.....++++       ..+++|+.++.++++++    ++.+.++||++||..+.....+    
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----  155 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWD-------DTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM----  155 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS----
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC----
Confidence            99999999753211111111222222       33489999998888887    6667789999999877544332    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                       ...|..+|...+.+.+       .+|+++++++||++.++....   ...........+  ...+.+++|+|++++.++
T Consensus       156 -~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~r~~~p~dvA~~v~~L~  232 (271)
T 3tzq_B          156 -STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHL--AGRIGEPHEIAELVCFLA  232 (271)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTST--TSSCBCHHHHHHHHHHHH
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCC--CCCCcCHHHHHHHHHHHh
Confidence             2569999999987765       268999999999999875431   000000000011  123578999999999998


Q ss_pred             cCcc--cCCceEEecc
Q 046297          295 QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~  308 (331)
                      .++.  ..|+++++.+
T Consensus       233 s~~~~~itG~~i~vdG  248 (271)
T 3tzq_B          233 SDRAAFITGQVIAADS  248 (271)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CcccCCcCCCEEEECC
Confidence            7654  4689999998

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.92  E-value=1.1e-24  Score=189.52  Aligned_cols=211  Identities=15%  Similarity=0.037  Sum_probs=152.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc---CCCEEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ---GIDALII  153 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~  153 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++.   .+.+++.+|++|++++.++++   ++|+|||
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   82 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVN   82 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEE
Confidence            45689999999999999999999999  999999999876654432   357788999999999999987   4899999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      |||......  +.....+++       ...+++|+.++.++++++..    .+ .++||++||..++.+..+     ...
T Consensus        83 ~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~~~  148 (244)
T 1cyd_A           83 NAALVIMQP--FLEVTKEAF-------DRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-----LIT  148 (244)
T ss_dssp             CCCCCCCBC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-----BHH
T ss_pred             CCcccCCCC--cccCCHHHH-------HHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC-----cch
Confidence            999643210  001111112       23348899998888877654    35 679999999876543322     257


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          229 ILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       229 y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      |+.+|...|.+.+.       .+++++++|||+++++.....    .........  ....++++++|+|++++.++.++
T Consensus       149 Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 1cyd_A          149 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER--HPLRKFAEVEDVVNSILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH--STTSSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhc--CCccCCCCHHHHHHHHHHHhCch
Confidence            99999999887652       589999999999998743210    000000000  11246899999999999999865


Q ss_pred             c--cCCceEEecc
Q 046297          298 E--AKFKAFDLAS  308 (331)
Q Consensus       298 ~--~~~~~~~i~~  308 (331)
                      .  ..|+.+++.+
T Consensus       227 ~~~~~G~~~~v~g  239 (244)
T 1cyd_A          227 SASTSGGGILVDA  239 (244)
T ss_dssp             GTTCCSSEEEEST
T ss_pred             hhcccCCEEEECC
Confidence            3  4578899887

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.92  E-value=1.4e-24  Score=191.20  Aligned_cols=218  Identities=12%  Similarity=0.055  Sum_probs=155.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++        ..++.++.+|++|++++.++++     
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34688999999999999999999999  99999999987654432        3457889999999999888876     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||.....  .+.....++++.       .+++|+.++.++++++    ++.+.++||++||..++.+..+
T Consensus        83 ~g~id~lv~~Ag~~~~~--~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNE--TIMEAADEKWQF-------YWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY  153 (263)
T ss_dssp             HSSCSEEEECCCCCCCC--CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             cCCCCEEEECCCCCCCC--CcccCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC
Confidence              799999999974321  111112222223       3378888887777665    4567789999999987544322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h-hhc--cC-C----cccc---CCccccc
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E-LLV--GK-D----DELL---QTETRTI  281 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~-~~~--~~-~----~~~~---~~~~~~i  281 (331)
                           ...|..+|...+.+.+       ..++++++++||+++++..... . ...  +. .    ..+.   .....+.
T Consensus       154 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  228 (263)
T 3ai3_A          154 -----EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFA  228 (263)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCB
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCc
Confidence                 2569999999887765       2689999999999998753211 0 000  00 0    0000   0113478


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCC
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      +++|+|++++.++..+.  ..|++|++.+   |...+
T Consensus       229 ~~~dvA~~~~~l~s~~~~~~~G~~~~vdg---G~~~s  262 (263)
T 3ai3_A          229 SPEELANFFVFLCSERATYSVGSAYFVDG---GMLKT  262 (263)
T ss_dssp             CHHHHHHHHHHHTSTTCTTCCSCEEEEST---TCCCC
T ss_pred             CHHHHHHHHHHHcCccccCCCCcEEEECC---Ccccc
Confidence            99999999999987653  4588999998   66554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.92  E-value=1.1e-24  Score=191.76  Aligned_cols=220  Identities=15%  Similarity=0.099  Sum_probs=150.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C----------CCCcEEEccCCCcccHHHHh
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G----------GADDLFIGDIRDSNSIIPAI  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~----------~~~~~v~~Dl~d~~~~~~~l  145 (331)
                      +.+++||||||+|+||+++++.|+++  |++|++++|++++.+.+    .          .++.++.+|++|++.+.+++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            44678999999999999999999999  99999999987654432    1          35788999999999888887


Q ss_pred             cC-------C-CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C-CCeEEEEccC
Q 046297          146 QG-------I-DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G-AKQIVLVGSM  212 (331)
Q Consensus       146 ~~-------~-d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-vk~~v~~SS~  212 (331)
                      ++       + |+||||||......  +......++       ...+++|+.++.++++++.+.    + .++||++||.
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  153 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEF--LLHMSEDDW-------DKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSI  153 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCT
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcc--hhhCCHHHH-------HHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECCh
Confidence            64       4 99999999743210  011111222       233488999999988887543    4 5699999998


Q ss_pred             CCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h-hhccCCccccCCcccccCH
Q 046297          213 GGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E-LLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       213 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~i~v  283 (331)
                      .+..+..+     ...|+.+|..++.+.+       ..+++++++|||+++++..... . .........+  ...+.++
T Consensus       154 ~~~~~~~~-----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~  226 (264)
T 2pd6_A          154 VGKVGNVG-----QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIP--MGHLGDP  226 (264)
T ss_dssp             HHHHCCTT-----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCT--TCSCBCH
T ss_pred             hhccCCCC-----ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCC--CCCCCCH
Confidence            65433322     2569999999887665       2689999999999999864311 0 0000000011  1246799


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCCHHHH
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTPTKDF  320 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~  320 (331)
                      +|+|++++.++.++.  ..|+.+++.+   |...+...+
T Consensus       227 ~dva~~~~~l~~~~~~~~~G~~~~v~g---g~~~~~~~~  262 (264)
T 2pd6_A          227 EDVADVVAFLASEDSGYITGTSVEVTG---GLFMAENLY  262 (264)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST---TC-------
T ss_pred             HHHHHHHHHHcCCcccCCCCCEEEECC---CceeccccC
Confidence            999999999987643  5688999998   766555443

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.92  E-value=1.4e-25  Score=199.59  Aligned_cols=231  Identities=18%  Similarity=0.160  Sum_probs=166.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CC---CCcEEEccCCCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GG---ADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~---~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|++++.++.       ..   .+.++.+|++|++++.++++   
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999  99999999987654432       11   47889999999999888875   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||......+ +.....++++       ..+++|+.++.++++++..    .+-.+||++||..+..+.
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~-------~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  158 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGP-ITQVDSEAWR-------RTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH  158 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCC-GGGCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC
T ss_pred             HHcCCCCEEEECCCcCCCCCC-cccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC
Confidence                68999999996332111 1111122222       3348999999888887654    344599999998765443


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      .+.     ..|+.+|...+.+.+       ..++++++++||++.++.....    ..........+  ...+.+++|+|
T Consensus       159 ~~~-----~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p--~~r~~~~~dva  231 (281)
T 3svt_A          159 RWF-----GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP--LPRQGEVEDVA  231 (281)
T ss_dssp             TTC-----THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS--SSSCBCHHHHH
T ss_pred             CCC-----hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC--CCCCCCHHHHH
Confidence            322     569999999988765       3579999999999988753211    00000000011  13457899999


Q ss_pred             HHHHHHhcCcc--cCCceEEeccCCCCCCCC-HHHHHHHHHHhhcc
Q 046297          288 EVCIQALQFEE--AKFKAFDLASKPEGTGTP-TKDFKALFSQITTR  330 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t-~~e~~~~~~~~~g~  330 (331)
                      ++++.++.++.  ..|++|++.+   |...+ ..++.+++.+..|+
T Consensus       232 ~~~~~l~s~~~~~itG~~~~vdg---G~~~~~~~~~~~~~~~~~~~  274 (281)
T 3svt_A          232 NMAMFLLSDAASFVTGQVINVDG---GQMLRRGPDFSAMLEPVFGR  274 (281)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST---TGGGSCCCCCHHHHHHHHCT
T ss_pred             HHHHHHhCcccCCCCCCEEEeCC---ChhcccCCcchhccccccCC
Confidence            99999987654  3689999988   77666 77888888887764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.92  E-value=1.7e-24  Score=190.37  Aligned_cols=217  Identities=16%  Similarity=0.104  Sum_probs=156.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|+.++.++    +...+.++++|++|++++.++++       ++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            45688999999999999999999999  9999999998766543    34567899999999999988886       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C-CCeEEEEccCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G-AKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      |+||||||.....  .+.....++++       ..+++|+.++.++++++...    + -.+||++||..+..+..+   
T Consensus        84 d~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  151 (259)
T 4e6p_A           84 DILVNNAALFDLA--PIVEITRESYE-------KLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL---  151 (259)
T ss_dssp             CEEEECCCCCCCB--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---
T ss_pred             CEEEECCCcCCCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC---
Confidence            9999999974321  11111222222       33478999998888876532    3 458999999877544332   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccC-Ccc---cc---CCcccccCHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGK-DDE---LL---QTETRTIARAD  285 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~-~~~---~~---~~~~~~i~v~D  285 (331)
                        ...|+.+|...+.+.+       ..++++++++||+++++.....    ...... ...   ..   .....+.+++|
T Consensus       152 --~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~d  229 (259)
T 4e6p_A          152 --VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAED  229 (259)
T ss_dssp             --BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHH
T ss_pred             --ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHH
Confidence              2569999999987765       2589999999999999864311    000000 000   00   11245789999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +|++++.++..+.  ..|++|++.+   |...
T Consensus       230 va~~v~~L~s~~~~~itG~~i~vdg---G~~~  258 (259)
T 4e6p_A          230 LTGMAIFLASAESDYIVSQTYNVDG---GNWM  258 (259)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEEST---TSSC
T ss_pred             HHHHHHHHhCCccCCCCCCEEEECc---Chhc
Confidence            9999999887553  4589999998   6544

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.92  E-value=3.3e-24  Score=188.57  Aligned_cols=210  Identities=14%  Similarity=0.106  Sum_probs=154.0

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      ....+++||||||+|+||++++++|+++  |++|++++|+.++...  ..+.++++|++|++++.++++       ++|+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDR--NYRVVATSRSIKPSAD--PDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCCCCSS--TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhhccc--CceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            3455789999999999999999999999  9999999998765332  257899999999999988876       7999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      ||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+.++||++||..+..+...   .+.
T Consensus       100 lv~nAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---~~~  167 (260)
T 3un1_A          100 LVNNAGVFLAK--PFVEMTQEDYD-------HNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG---MPS  167 (260)
T ss_dssp             EEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT---CCC
T ss_pred             EEECCCCCCCC--ChhhCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC---Ccc
Confidence            99999975321  11111222222       33488999988888876    5667789999999876432211   223


Q ss_pred             chHHHHHHHHHHHHH----h---cCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          227 GNILVWKRKAEQYLA----D---SGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~----~---~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      ..|..+|...+.+.+    +   .|+++++++||++.++....  ...+.+.   .  ....+.+++|+|++++.+.+..
T Consensus       168 ~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~---~--p~~r~~~~~dva~av~~L~~~~  242 (260)
T 3un1_A          168 ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGL---H--PVGRMGEIRDVVDAVLYLEHAG  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTT---S--TTSSCBCHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhcc---C--CCCCCcCHHHHHHHHHHhcccC
Confidence            579999999987765    2   48999999999999986431  1111111   1  1134678999999999985545


Q ss_pred             ccCCceEEecc
Q 046297          298 EAKFKAFDLAS  308 (331)
Q Consensus       298 ~~~~~~~~i~~  308 (331)
                      ...|++|++.+
T Consensus       243 ~itG~~i~vdG  253 (260)
T 3un1_A          243 FITGEILHVDG  253 (260)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCCCcEEEECC
Confidence            46789999997

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.92  E-value=2e-25  Score=200.47  Aligned_cols=227  Identities=11%  Similarity=0.035  Sum_probs=162.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ++.+++||||||+|+||++++++|+++  |++|++++|++++.+.+        ..++.++.+|++|++++.++++    
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            345688999999999999999999999  99999999987654432        3458899999999999888775    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH-----cCCCeEEEEccCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA-----AGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~-----~~vk~~v~~SS~~~~~~~  218 (331)
                         ++|+||||||......  +......++       ...+++|+.++.++++++..     .+.++||++||..+..+.
T Consensus       101 ~~g~id~li~~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~  171 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFISP--TERLSPNAW-------KTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS  171 (302)
T ss_dssp             HTCSCSEEEECCCCCCCSC--GGGCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC
T ss_pred             HcCCCCEEEECCCCCCCCc--cccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC
Confidence               4699999999643210  001111122       23348899999888777643     345799999998764433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hh------hhhccCCccccCCcccccCH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IR------ELLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~------~~~~~~~~~~~~~~~~~i~v  283 (331)
                      .+     ...|+.+|..++.+.+       ..+++++++|||+++++...  ..      ..+...   .+  ...+.++
T Consensus       172 ~~-----~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~p--~~~~~~~  241 (302)
T 1w6u_A          172 GF-----VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGR---IP--CGRLGTV  241 (302)
T ss_dssp             TT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTT---CT--TSSCBCH
T ss_pred             CC-----cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhc---CC--cCCCCCH
Confidence            22     2569999999987765       26899999999999887321  00      000000   11  1246899


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +|+|++++.++..+.  ..|++|++.+   |...++.++++.+.++.|
T Consensus       242 ~dva~~~~~l~~~~~~~~~G~~~~v~g---g~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          242 EELANLAAFLCSDYASWINGAVIKFDG---GEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEEST---THHHHHHSTTGGGGGCCH
T ss_pred             HHHHHHHHHHcCCcccccCCCEEEECC---CeeeccCCccccchhhcc
Confidence            999999999987653  3688999998   877888888777666554

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.92  E-value=3.2e-24  Score=188.67  Aligned_cols=207  Identities=14%  Similarity=0.085  Sum_probs=151.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.++    +...+.++.+|++|++++.++++       ++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            34688999999999999999999999  9999999998766543    23347789999999999988887       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||.....  .+.....++++       ..+++|+.++.+    +++.+++.+.++||++||..++....+    
T Consensus        83 D~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  149 (260)
T 1nff_A           83 HVLVNNAGILNIG--TIEDYALTEWQ-------RILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA----  149 (260)
T ss_dssp             CEEEECCCCCCCB--CTTTSCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             CEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCC----
Confidence            9999999974321  11111112222       234889888854    455566677889999999877543322    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCc-cccCCcccccCHHHHHHHHHHHhcC
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDD-ELLQTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                       ...|..+|...+.+.+       ..|++++++|||+++++....    ..... ..+  ...+.+++|+|++++.++..
T Consensus       150 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~--~~~~~~~~dvA~~v~~l~s~  222 (260)
T 1nff_A          150 -CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW----VPEDIFQTA--LGRAAEPVEVSNLVVYLASD  222 (260)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT----SCTTCSCCS--SSSCBCHHHHHHHHHHHHSG
T ss_pred             -chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc----chhhHHhCc--cCCCCCHHHHHHHHHHHhCc
Confidence             2579999999987765       268999999999999875321    11100 111  12468899999999999876


Q ss_pred             cc--cCCceEEecc
Q 046297          297 EE--AKFKAFDLAS  308 (331)
Q Consensus       297 ~~--~~~~~~~i~~  308 (331)
                      +.  ..|+.|++.+
T Consensus       223 ~~~~~~G~~~~v~g  236 (260)
T 1nff_A          223 ESSYSTGAEFVVDG  236 (260)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             cccCCcCCEEEECC
Confidence            53  3588999987

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.92  E-value=1.6e-23  Score=183.92  Aligned_cols=215  Identities=17%  Similarity=0.121  Sum_probs=153.8

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++.+++||||||+|+||++++++|+++  |++|++++|++++.+.+       ..++.++.+|++|++++.++++     
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            345788999999999999999999999  99999999987654322       3458899999999999888875     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||...... .+......+++       ..+++|+.++.++++++..    .+.++||++||..+.....+
T Consensus        88 ~~~id~vi~~Ag~~~~~~-~~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  159 (260)
T 3awd_A           88 EGRVDILVACAGICISEV-KAEDMTDGQWL-------KQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP  159 (260)
T ss_dssp             HSCCCEEEECCCCCCCSC-CTTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS
T ss_pred             cCCCCEEEECCCCCCCCC-CcccCCHHHHH-------HHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC
Confidence              7999999999743111 01111111122       2348899999888877653    46789999999876543222


Q ss_pred             CCCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                         .....|+.+|...|.+.+.       .+++++++|||+++++.....    ..........+  ...+++++|+|++
T Consensus       160 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~  234 (260)
T 3awd_A          160 ---QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP--MGRVGQPDEVASV  234 (260)
T ss_dssp             ---SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT--TSSCBCHHHHHHH
T ss_pred             ---CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC--cCCCCCHHHHHHH
Confidence               1225799999999887652       689999999999999865310    00000000011  1346899999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..|++|++.+
T Consensus       235 ~~~l~~~~~~~~~G~~~~v~g  255 (260)
T 3awd_A          235 VQFLASDAASLMTGAIVNVDA  255 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCchhccCCCcEEEECC
Confidence            999987643  4688999987

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.91  E-value=1.6e-24  Score=183.16  Aligned_cols=188  Identities=14%  Similarity=0.110  Sum_probs=141.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC---CCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG---IDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~---~d~Vi~~ag~~  158 (331)
                      +|+||||||+|+||++++++|+ +  |++|++++|+++          ++.+|++|++++.+++++   +|+||||||..
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~   69 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSG----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSA   69 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSS----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCcc----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            4589999999999999999999 8  999999999864          578999999999988875   89999999964


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRK  235 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~  235 (331)
                      ....  +.....+++       ...+++|+.++.++++++.+.   + ++||++||..+..+..+     ...|..+|..
T Consensus        70 ~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~-----~~~Y~~sK~~  134 (202)
T 3d7l_A           70 TFSP--LTELTPEKN-------AVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQ-----GASAAMANGA  134 (202)
T ss_dssp             CCCC--GGGCCHHHH-------HHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTT-----CHHHHHHHHH
T ss_pred             CCCC--hhhCCHHHH-------HHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCc-----cHHHHHHHHH
Confidence            3210  000111111       223378999999999999876   4 69999999876543222     2579999999


Q ss_pred             HHHHHHh------cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEec
Q 046297          236 AEQYLAD------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLA  307 (331)
Q Consensus       236 ~e~~~~~------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~  307 (331)
                      .|.+.+.      .+++++++|||+++++......   .      ....++++++|+|++++.++. ....|++|++.
T Consensus       135 ~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~~~---~------~~~~~~~~~~dva~~~~~~~~-~~~~G~~~~vd  202 (202)
T 3d7l_A          135 VTAFAKSAAIEMPRGIRINTVSPNVLEESWDKLEP---F------FEGFLPVPAAKVARAFEKSVF-GAQTGESYQVY  202 (202)
T ss_dssp             HHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHHGG---G------STTCCCBCHHHHHHHHHHHHH-SCCCSCEEEEC
T ss_pred             HHHHHHHHHHHccCCeEEEEEecCccCCchhhhhh---h------ccccCCCCHHHHHHHHHHhhh-ccccCceEecC
Confidence            9988763      3899999999999987532110   0      113568999999999998884 34567888873

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.91  E-value=1.4e-24  Score=189.23  Aligned_cols=211  Identities=15%  Similarity=0.049  Sum_probs=149.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+.+        ...+.++.+|++|++++.++++     
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            34678999999999999999999999  99999999987654432        3357889999999999988886     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||......  +......++       ...+++|+.++.++++    .+++.+.++||++||..+.....+
T Consensus        83 ~~~~d~vi~~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  153 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKL--FLRMSLLDW-------EEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVG  153 (248)
T ss_dssp             SSCCSEEEECCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             cCCCCEEEECCCCCCCCc--cccCCHHHH-------HHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCC
Confidence              7999999999643210  001111122       2334889999855554    455667889999999865333221


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhh-ccCCccccCCcccccCHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELL-VGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~-~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                           ...|..+|...+.+.+       ..+++++++|||+++++..... ... .......+  ...+++++|+|++++
T Consensus       154 -----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~  226 (248)
T 2pnf_A          154 -----QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIP--LGRFGSPEEVANVVL  226 (248)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCT--TSSCBCHHHHHHHHH
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCC--CCCccCHHHHHHHHH
Confidence                 2569999999887765       2589999999999998753210 000 00000011  134789999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.++.  ..|++|++.+
T Consensus       227 ~l~~~~~~~~~G~~~~v~g  245 (248)
T 2pnf_A          227 FLCSELASYITGEVIHVNG  245 (248)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhhcCCCcEEEeCC
Confidence            9987642  4588999987

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.91  E-value=1.2e-23  Score=187.05  Aligned_cols=219  Identities=16%  Similarity=0.100  Sum_probs=156.9

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc------------hhh-------hcCCCCcEEEccCCCc
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE------------SKQ-------KIGGADDLFIGDIRDS  138 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~------------~~~-------~l~~~~~~v~~Dl~d~  138 (331)
                      .+..++++|||||+|+||++++++|+++  |++|++++|++.            ..+       ....++.++++|++|+
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            3456789999999999999999999999  999999999732            111       1234578899999999


Q ss_pred             ccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEE
Q 046297          139 NSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIV  207 (331)
Q Consensus       139 ~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v  207 (331)
                      +++.++++       ++|+||||||.....  .+.....++++.       .+++|+.++.++++++    ++.+..+||
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~~~~~~~g~iv  154 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIA--LLPEVESAQWDE-------VIGTNLTGTFNTIAAVAPGMIKRNYGRIV  154 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCC--CTTCCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCC--CcccCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence            99888876       799999999975431  111222222333       3489999988888875    455677999


Q ss_pred             EEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh---hc----cCCc--
Q 046297          208 LVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL---LV----GKDD--  271 (331)
Q Consensus       208 ~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~---~~----~~~~--  271 (331)
                      ++||..+.....+     ...|+.+|...+.+.+       ..|+++++++||+++++.......   ..    ....  
T Consensus       155 ~isS~~~~~~~~~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  229 (281)
T 3s55_A          155 TVSSMLGHSANFA-----QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKD  229 (281)
T ss_dssp             EECCGGGGSCCTT-----CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHH
T ss_pred             EECChhhcCCCCC-----CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhH
Confidence            9999877544332     2579999999887765       358999999999999986431100   00    0000  


Q ss_pred             ------cccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          272 ------ELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       272 ------~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                            ........+.+++|+|++++.++.++.  ..|+++++.+   |...
T Consensus       230 ~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg---G~~~  278 (281)
T 3s55_A          230 VESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA---GATA  278 (281)
T ss_dssp             HHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST---TGGG
T ss_pred             HHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC---Cccc
Confidence                  001112467899999999999998754  4589999998   6543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.91  E-value=2.9e-24  Score=186.92  Aligned_cols=211  Identities=14%  Similarity=0.058  Sum_probs=152.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc---CCCEEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ---GIDALII  153 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~  153 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|++++.+.+.   ...+++.+|++|++++.++++   ++|+|||
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   82 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVN   82 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEE
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEE
Confidence            34678999999999999999999999  999999999876655432   246788999999999999986   5899999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      |||......  +.....+++       ...+++|+.++.++++++..    .+ .++||++||..+..+..+     ...
T Consensus        83 ~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~~~  148 (244)
T 3d3w_A           83 NAAVALLQP--FLEVTKEAF-------DRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN-----HSV  148 (244)
T ss_dssp             CCCCCCCBC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-----BHH
T ss_pred             CCccCCCcc--hhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC-----Cch
Confidence            999643210  001111112       23348899998887777654    35 679999999876543322     257


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchhhhhccCC--cccc--CCcccccCHHHHHHHHHHHhcCc
Q 046297          229 ILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIRELLVGKD--DELL--QTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       229 y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~~~~~~~~--~~~~--~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      |+.+|..+|.+.+.       .+++++++|||+++++.....  .....  ..+.  .....+++++|+|++++.++.++
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--WSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH--SCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh--ccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999987652       589999999999998753210  00000  0000  01235789999999999999765


Q ss_pred             c--cCCceEEecc
Q 046297          298 E--AKFKAFDLAS  308 (331)
Q Consensus       298 ~--~~~~~~~i~~  308 (331)
                      .  ..|++|++.+
T Consensus       227 ~~~~~G~~~~v~g  239 (244)
T 3d3w_A          227 SGMTTGSTLPVEG  239 (244)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             ccCCCCCEEEECC
Confidence            3  4688999987

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.91  E-value=6.5e-24  Score=186.93  Aligned_cols=217  Identities=15%  Similarity=0.113  Sum_probs=155.1

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------C-CCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------G-GADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~-~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|++++|++++.++.       . .++.++++|++|++++.++++    
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            455789999999999999999999999  99999999997665432       1 357889999999999888876    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+||||||.....  .+.....++++.       .+++|+.++.++++++..    .+.++||++||..+.....
T Consensus        85 ~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  155 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFPDA--PLATMTPEQLNG-------IFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY  155 (262)
T ss_dssp             HHSCCSEEEECCCCCCCC--CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC
T ss_pred             HhCCCCEEEECCCCCCCC--ChhhCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC
Confidence               799999999975431  111222222233       348899998887777654    4778999999987631211


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      +    ....|+.+|..++.+.+       ..|+++++++||++.++....  ...........+  ...+.+++|+|+++
T Consensus       156 ~----~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p--~~r~~~p~dva~~v  229 (262)
T 3pk0_A          156 P----GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIP--AGALGTPEDIGHLA  229 (262)
T ss_dssp             T----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTST--TSSCBCHHHHHHHH
T ss_pred             C----CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCC--CCCCcCHHHHHHHH
Confidence            1    12579999999987765       268999999999998863210  000000000111  12357899999999


Q ss_pred             HHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          291 IQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +.++..+.  ..|+++++.+   |...
T Consensus       230 ~~L~s~~~~~itG~~i~vdG---G~~~  253 (262)
T 3pk0_A          230 AFLATKEAGYITGQAIAVDG---GQVL  253 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEEST---TTTC
T ss_pred             HHHhCccccCCcCCEEEECC---Ceec
Confidence            99987654  5689999987   6543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.91  E-value=7.2e-24  Score=185.78  Aligned_cols=211  Identities=14%  Similarity=0.062  Sum_probs=151.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++    ..++.++.+|++|++++.++++       ++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45688999999999999999999999  99999999997665443    2347788999999999988876       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHH----HHHHHHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQK----NQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||.....  .+.....+++       ...+++|+.++.    .+++.+++.+.++||++||..+.....+    
T Consensus        81 D~lv~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  147 (254)
T 1hdc_A           81 DGLVNNAGISTGM--FLETESVERF-------RKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL----  147 (254)
T ss_dssp             CEEEECCCCCCCS--CGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             CEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC----
Confidence            9999999964321  0111111222       233488888876    5566667777889999999876543322    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc-CC-ccccc-CHHHHHHHHHHHh
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL-QT-ETRTI-ARADVAEVCIQAL  294 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~-~~~~i-~v~Dva~~~~~~l  294 (331)
                       ...|..+|...+.+.+       ..++++++++||+++++....  ........+. .. ...+. +++|+|++++.++
T Consensus       148 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~  224 (254)
T 1hdc_A          148 -TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE--TGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL  224 (254)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--HTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred             -chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc--cchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Confidence             2579999999887765       358999999999998874221  1000000110 00 12356 9999999999998


Q ss_pred             cCcc--cCCceEEecc
Q 046297          295 QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~  308 (331)
                      .++.  ..|+.+++.+
T Consensus       225 s~~~~~~tG~~~~vdg  240 (254)
T 1hdc_A          225 SDTSSYVTGAELAVDG  240 (254)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CchhcCCCCCEEEECC
Confidence            7653  4688999987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.91  E-value=7.1e-24  Score=186.93  Aligned_cols=212  Identities=13%  Similarity=0.032  Sum_probs=140.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHh-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAI-------  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l-------  145 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++.+|++|++++.+++       
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            44688999999999999999999999  99999999987654432       235788999999999888877       


Q ss_pred             -cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          146 -QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       146 -~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                       .++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+.++||++||..+.....+
T Consensus        90 ~~~id~li~~Ag~~~~~--~~~~~~~~~~~-------~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  160 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSK--PTLDYTAEDFS-------FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV  160 (266)
T ss_dssp             TTCCSEEEEECCC--------CCCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------
T ss_pred             CCCCcEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC
Confidence             4689999999964321  01111112222       33488999999998887    5667889999999876543222


Q ss_pred             CCCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchhhhhccCCcccc-CC-cccccCHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELL-QT-ETRTIARADVAEVCI  291 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~-~~~~i~v~Dva~~~~  291 (331)
                           ...|+.+|...+.+.+.       .+++++++|||+++++...... .......+. .. ...+++++|+|++++
T Consensus       161 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (266)
T 1xq1_A          161 -----GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVA  234 (266)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHH
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                 25699999999877652       4899999999999998532110 000000000 00 124689999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++..+.  ..|+++++.+
T Consensus       235 ~l~~~~~~~~~G~~~~v~g  253 (266)
T 1xq1_A          235 FLCMPAASYITGQTICVDG  253 (266)
T ss_dssp             HHTSGGGTTCCSCEEECCC
T ss_pred             HHcCccccCccCcEEEEcC
Confidence            9987643  4588999987

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.91  E-value=1.1e-23  Score=184.94  Aligned_cols=218  Identities=16%  Similarity=0.088  Sum_probs=151.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.++.    ..++.++.+|++|++++.++++       ++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34688999999999999999999999  99999999998765543    3358899999999999988886       79


Q ss_pred             CEEEEcccCCCCCCCC--CCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----------CCCeEEEEccCCCCC
Q 046297          149 DALIILTSAVPKMKPD--FDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----------GAKQIVLVGSMGGTN  216 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~vk~~v~~SS~~~~~  216 (331)
                      |+||||||........  ..+...+++       ...+++|+.++..+++++...          +..+||++||..+..
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSF-------ARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD  155 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHH-------HHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             CEEEECCCCCCCCccccccccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc
Confidence            9999999975432100  000111222       233489999999988887653          345899999987654


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      ...+     ...|+.+|...+.+.+       ..|+++++++||++.++.....  ..........+- ...+.+++|+|
T Consensus       156 ~~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~-~~r~~~~~dva  229 (257)
T 3tpc_A          156 GQIG-----QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPF-PPRLGRAEEYA  229 (257)
T ss_dssp             CCTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSS-SCSCBCHHHHH
T ss_pred             CCCC-----CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCC-CCCCCCHHHHH
Confidence            3322     2569999999887654       3689999999999998753211  000000001111 13468999999


Q ss_pred             HHHHHHhcCcccCCceEEeccCCCCCCC
Q 046297          288 EVCIQALQFEEAKFKAFDLASKPEGTGT  315 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~~~~~~~~  315 (331)
                      ++++.++.+....|+++++.+   |...
T Consensus       230 ~~v~~l~s~~~itG~~i~vdG---G~~~  254 (257)
T 3tpc_A          230 ALVKHICENTMLNGEVIRLDG---ALRM  254 (257)
T ss_dssp             HHHHHHHHCTTCCSCEEEEST---TCCC
T ss_pred             HHHHHHcccCCcCCcEEEECC---CccC
Confidence            999999987656789999998   6544

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.91  E-value=2.9e-23  Score=181.54  Aligned_cols=210  Identities=13%  Similarity=0.073  Sum_probs=144.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+++. ...  ++.++.+|++|++++.++++       ++|+||
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~-~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQAFTQ-EQY--PFATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCCCS-SCC--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCchhh-hcC--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34688999999999999999999999  9999999998653 111  27889999999999988876       799999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||||.....  .+.....++++.       .+++|+.++.++++++    ++.+.++||++||..+..+..+     ...
T Consensus        80 ~~Ag~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----~~~  145 (250)
T 2fwm_X           80 NAAGILRMG--ATDQLSKEDWQQ-------TFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG-----MSA  145 (250)
T ss_dssp             ECCCCCCCC--CTTTSCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-----CHH
T ss_pred             ECCCcCCCC--CcccCCHHHHHH-------HHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC-----Cch
Confidence            999974321  111112222333       3488999988888776    5567789999999987543322     256


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCc-ccc--------CC-cccccCHHHHHHHHH
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDD-ELL--------QT-ETRTIARADVAEVCI  291 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~-~~~--------~~-~~~~i~v~Dva~~~~  291 (331)
                      |..+|...+.+.+       ..++++++++||++.++............. .+.        .. ...+.+++|+|++++
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~  225 (250)
T 2fwm_X          146 YGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL  225 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHH
Confidence            9999999987765       258999999999999875321100000000 000        00 123678999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.++.  ..|+.+++.+
T Consensus       226 ~l~s~~~~~~tG~~i~vdG  244 (250)
T 2fwm_X          226 FLASDLASHITLQDIVVDG  244 (250)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCccccCCCCCEEEECC
Confidence            9997653  4688999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.91  E-value=2.6e-24  Score=189.19  Aligned_cols=217  Identities=14%  Similarity=0.094  Sum_probs=155.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++       ...+.++.+|++|++++.++++      
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQD--GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45688999999999999999999999  99999999987654432       2347788999999998888776      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||...... .+.....++++       ..+++|+.++.++++++    ++.+.++||++||..++.+..+ 
T Consensus        90 g~iD~lv~~Ag~~~~~~-~~~~~~~~~~~-------~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  160 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFG-NIIDATEEVWD-------KILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN-  160 (260)
T ss_dssp             SCCCEEEECCCCCCCCB-CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-
T ss_pred             CCCCEEEECCCCCCCCC-CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC-
Confidence             7999999999643111 01111111222       23488999987777765    4567789999999987644322 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC--cccc--CCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD--DELL--QTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~--~~~~--~~~~~~i~v~Dva~~~  290 (331)
                          ...|+.+|...+.+.+       ..++++++++||++.++.....  .....  ..+.  .....+.+++|+|+++
T Consensus       161 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~v  234 (260)
T 2zat_A          161 ----LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVL--WMDKARKEYMKESLRIRRLGNPEDCAGIV  234 (260)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHH--HSSHHHHHHHHHHHTCSSCBCGGGGHHHH
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhc--ccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                2579999999987766       2589999999999988753210  00000  0000  0113478999999999


Q ss_pred             HHHhcCcc--cCCceEEeccCCCCCCCC
Q 046297          291 IQALQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      +.++.++.  ..|+++++.+   |...+
T Consensus       235 ~~l~s~~~~~~tG~~~~vdg---G~~~s  259 (260)
T 2zat_A          235 SFLCSEDASYITGETVVVGG---GTASR  259 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEEST---TCCCC
T ss_pred             HHHcCcccCCccCCEEEECC---Ccccc
Confidence            99987654  3688999998   76655

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=5.6e-24  Score=184.71  Aligned_cols=210  Identities=16%  Similarity=0.059  Sum_probs=151.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc------CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ------GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~------~~d~Vi~~a  155 (331)
                      +++||||||+|+||++++++|+++  |++|++++|+++ .    .++.++.+|++|++++.++++      ++|+|||||
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~-~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a   74 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE-G----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   74 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC-S----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccCcc-c----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence            478999999999999999999999  999999999876 2    346899999999999998887      789999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC----------CCeEEEEccCCCCCCCCCCCCCC
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG----------AKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~----------vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      |......  +..   ..++..+++....+++|+.++.++++++.+..          .++||++||..++....+     
T Consensus        75 g~~~~~~--~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  144 (242)
T 1uay_A           75 GVGLAEK--ILG---KEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-----  144 (242)
T ss_dssp             CCCCCCC--SBC---SSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT-----
T ss_pred             cccCccc--ccc---cccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC-----
Confidence            9743311  000   01110011122334889999999998886541          128999999876543322     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      ...|..+|...+.+.+       ..+++++++|||+++++....     ...+... .++   ...+++++|+|++++.+
T Consensus       145 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~dva~~~~~l  220 (242)
T 1uay_A          145 QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQ-VPF---PPRLGRPEEYAALVLHI  220 (242)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTT-CCS---SCSCCCHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhh-CCC---cccCCCHHHHHHHHHHH
Confidence            2569999999887665       248999999999999874221     1111111 111   13468999999999999


Q ss_pred             hcCcccCCceEEeccCCCCCCC
Q 046297          294 LQFEEAKFKAFDLASKPEGTGT  315 (331)
Q Consensus       294 l~~~~~~~~~~~i~~~~~~~~~  315 (331)
                      +.++...|+.|++.+   |...
T Consensus       221 ~~~~~~~G~~~~v~g---G~~~  239 (242)
T 1uay_A          221 LENPMLNGEVVRLDG---ALRM  239 (242)
T ss_dssp             HHCTTCCSCEEEEST---TCCC
T ss_pred             hcCCCCCCcEEEEcC---Ceec
Confidence            987556789999987   6544

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.91  E-value=1.3e-23  Score=184.75  Aligned_cols=213  Identities=13%  Similarity=0.031  Sum_probs=149.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C----C-CCcEEEccCCCcccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G----G-ADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~----~-~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++    .    . ++.++.+|++|++++.++++    
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999  99999999987654432    1    2 57889999999999988886    


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||.....  .+.....+++       ...+++|+.++..++    +.+++.+.++||++||..++.+..+
T Consensus        83 ~~gid~lv~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  153 (260)
T 2z1n_A           83 LGGADILVYSTGGPRPG--RFMELGVEDW-------DESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD  153 (260)
T ss_dssp             TTCCSEEEECCCCCCCB--CGGGCCHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             hcCCCEEEECCCCCCCC--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC
Confidence              699999999964321  0111111222       233488998875554    4455667889999999887543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--------hhhccC-Ccccc-C-CcccccC
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--------ELLVGK-DDELL-Q-TETRTIA  282 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--------~~~~~~-~~~~~-~-~~~~~i~  282 (331)
                           ...|..+|...+.+.+       ..++++++|+||+++++.....        ...... ...+. . ....+.+
T Consensus       154 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  228 (260)
T 2z1n_A          154 -----LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGK  228 (260)
T ss_dssp             -----BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCC
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccC
Confidence                 2579999999887665       3589999999999988753200        000000 00010 0 0123679


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++|+|++++.++..+.  ..|+.+++.+
T Consensus       229 ~~dva~~v~~l~s~~~~~~tG~~i~vdG  256 (260)
T 2z1n_A          229 PEELASVVAFLASEKASFITGAVIPVDG  256 (260)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            9999999999987643  4688999987

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.91  E-value=1.4e-23  Score=186.10  Aligned_cols=218  Identities=14%  Similarity=0.048  Sum_probs=149.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhhc--------CCCCcEEEccCCCc----ccHHHHhc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQKI--------GGADDLFIGDIRDS----NSIIPAIQ  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~l--------~~~~~~v~~Dl~d~----~~~~~~l~  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++| ++++.+++        ...+.++.+|++|+    +++.++++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            45688999999999999999999999  999999999 76554432        34578899999999    88887775


Q ss_pred             -------CCCEEEEcccCCCCCCCCCCCCCC----CCCccccccCCCcceehHHHHHHHHHHHHHc---CC------CeE
Q 046297          147 -------GIDALIILTSAVPKMKPDFDPAKG----GRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GA------KQI  206 (331)
Q Consensus       147 -------~~d~Vi~~ag~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v------k~~  206 (331)
                             ++|+||||||.....  .+.....    .+.+...++....+++|+.++.++++++...   +.      ++|
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~i  164 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPT--PLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  164 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCC--CSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCC--CccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence                   799999999975321  1111111    0000000111233488999999999988763   44      799


Q ss_pred             EEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhccCCccccCCcc
Q 046297          207 VLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVGKDDELLQTET  278 (331)
Q Consensus       207 v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~  278 (331)
                      |++||..++.+..+     ...|..+|..++.+.+       ..|+++++|+||++.++ .... ..........+ .++
T Consensus       165 v~isS~~~~~~~~~-----~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~p-~~r  237 (276)
T 1mxh_A          165 VNLCDAMTDLPLPG-----FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKVP-LGQ  237 (276)
T ss_dssp             EEECCGGGGSCCTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTTCT-TTS
T ss_pred             EEECchhhcCCCCC-----CeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhcCC-CCC
Confidence            99999877543322     2569999999887765       25899999999999988 3211 10000000111 112


Q ss_pred             cccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          279 RTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .+.+++|+|++++.++..+.  ..|+.+++.+
T Consensus       238 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  269 (276)
T 1mxh_A          238 SEASAAQIADAIAFLVSKDAGYITGTTLKVDG  269 (276)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            27899999999999987643  3588999987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.91  E-value=1.3e-23  Score=183.17  Aligned_cols=207  Identities=14%  Similarity=0.103  Sum_probs=140.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++||||||+|+||++++++|+++  |++|+++ .|+++..+.+       ..++.++.+|++|++++.++++      
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999  9999999 5665544321       3457889999999999988876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||.....  .+......+++..+       ++|+.++.++++++.    +.+.++||++||..+.....  
T Consensus        82 ~~~d~vi~~Ag~~~~~--~~~~~~~~~~~~~~-------~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--  150 (247)
T 2hq1_A           82 GRIDILVNNAGITRDT--LMLKMSEKDWDDVL-------NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA--  150 (247)
T ss_dssp             SCCCEEEECC-----------------CHHHH-------HHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----------
T ss_pred             CCCCEEEECCCCCCCC--ccccCCHHHHHHHH-------HHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC--
Confidence             799999999974321  11122233444444       889999777776654    45778999999986533322  


Q ss_pred             CCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                         ....|+.+|..++.+.+.       .++++++++||++.++....     ...+...   .+  ...+++++|+|++
T Consensus       151 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---~~--~~~~~~~~dva~~  222 (247)
T 2hq1_A          151 ---GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNN---IP--LKRFGTPEEVANV  222 (247)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTT---ST--TSSCBCHHHHHHH
T ss_pred             ---CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhh---CC--CCCCCCHHHHHHH
Confidence               125799999998877652       48999999999998753210     0111110   11  1347899999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..|++|++.+
T Consensus       223 ~~~l~~~~~~~~~G~~~~v~g  243 (247)
T 2hq1_A          223 VGFLASDDSNYITGQVINIDG  243 (247)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHcCcccccccCcEEEeCC
Confidence            999887653  3688999987

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.91  E-value=9.4e-24  Score=185.95  Aligned_cols=213  Identities=14%  Similarity=0.052  Sum_probs=151.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++    ..++.++++|++|++++.++++       ++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKA--GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            44688999999999999999999999  99999999987665432    3357889999999999988886       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CCeEEEEccCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      |+||||||.....  .+.....++++       ..+++|+.++.++++++..    .+ .++||++||..+.....+   
T Consensus        88 D~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  155 (263)
T 3ak4_A           88 DLLCANAGVSTMR--PAVDITDEEWD-------FNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL---  155 (263)
T ss_dssp             CEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---
T ss_pred             CEEEECCCcCCCC--ChhhCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC---
Confidence            9999999964321  01011111222       2348899888888777643    45 679999999876543221   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh----hccC--C---cccc--CCcccccCHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL----LVGK--D---DELL--QTETRTIARAD  285 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~----~~~~--~---~~~~--~~~~~~i~v~D  285 (331)
                        ...|..+|...+.+.+       ..++++++||||+++++.......    ..+.  .   ..+.  .....+++++|
T Consensus       156 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  233 (263)
T 3ak4_A          156 --LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPED  233 (263)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHH
T ss_pred             --chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHH
Confidence              2579999999887765       258999999999998874321100    0000  0   0000  01134789999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|++++.++.++.  ..|++|++.+
T Consensus       234 vA~~v~~l~s~~~~~~tG~~~~vdg  258 (263)
T 3ak4_A          234 VADVVVFLASDAARFMTGQGINVTG  258 (263)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHhCccccCCCCCEEEECc
Confidence            9999999997653  4688999987

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.91  E-value=2.4e-23  Score=181.71  Aligned_cols=211  Identities=17%  Similarity=0.090  Sum_probs=149.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++||||||+|+||++++++|+++  |++|++++|++++.+++        ..++.++.+|++|++++.++++       
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLAR--GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999  99999999987654432        2347889999999999988876       


Q ss_pred             CCCEEEEcccCCCCCCC-CCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKP-DFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                      ++|+||||||....... .+.....+++       ...+++|+.++..++++    +++.+.++||++||..+.....+ 
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  151 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQF-------DKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG-  151 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC-
Confidence            79999999997432100 0001111112       23347888887655544    45567889999999876543322 


Q ss_pred             CCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ...|+.+|...+.+.+.       .+++++++|||+++++.....    ..........+  ...+.+++|+|+++
T Consensus       152 ----~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~  225 (250)
T 2cfc_A          152 ----RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP--QKEIGTAAQVADAV  225 (250)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT--TCSCBCHHHHHHHH
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC--CCCCcCHHHHHHHH
Confidence                25799999999877652       489999999999999864321    00000000011  13467999999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.++.  ..|+.+++.+
T Consensus       226 ~~l~~~~~~~~~G~~~~v~g  245 (250)
T 2cfc_A          226 MFLAGEDATYVNGAALVMDG  245 (250)
T ss_dssp             HHHHSTTCTTCCSCEEEEST
T ss_pred             HHHcCchhhcccCCEEEECC
Confidence            99998654  4588999986

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.91  E-value=1.8e-23  Score=183.57  Aligned_cols=219  Identities=14%  Similarity=0.052  Sum_probs=154.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .+.++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++++|++|++++.++++     
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999  99999999997665442       2357889999999999888876     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH-----HHcCCCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA-----KAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa-----~~~~vk~~v~~SS~~~~~~~~  219 (331)
                        ++|+||||||.....  .+.....++++       ..+++|+.++.++++++     ++.+..+||++||..+.....
T Consensus        81 ~g~id~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  151 (257)
T 3imf_A           81 FGRIDILINNAAGNFIC--PAEDLSVNGWN-------SVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP  151 (257)
T ss_dssp             HSCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC
Confidence              789999999964321  11111222222       33489999998888876     334467999999987754432


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH--------hcCCCEEEEecCcccCCCcchhhhhccC-Ccccc-C-CcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA--------DSGIPYTIIRAGGLQDKEGGIRELLVGK-DDELL-Q-TETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~--------~~~~~~~ilrp~~v~g~~~~~~~~~~~~-~~~~~-~-~~~~~i~v~Dva~  288 (331)
                      .     ...|..+|...+.+.+        ..|+++++|+||++.++........... ...+. . ....+.+++|+|+
T Consensus       152 ~-----~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  226 (257)
T 3imf_A          152 G-----VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAG  226 (257)
T ss_dssp             T-----CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHH
T ss_pred             C-----cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            2     2569999998876554        3589999999999988753211100000 00000 0 1124679999999


Q ss_pred             HHHHHhcCcc--cCCceEEeccCCCCCCCC
Q 046297          289 VCIQALQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      +++.++.++.  ..|+.+++.+   |....
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdG---G~~~~  253 (257)
T 3imf_A          227 LAYYLCSDEAAYINGTCMTMDG---GQHLH  253 (257)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST---TTTSC
T ss_pred             HHHHHcCchhcCccCCEEEECC---CcccC
Confidence            9999997654  4689999998   66544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.91  E-value=8.7e-24  Score=184.37  Aligned_cols=209  Identities=16%  Similarity=0.101  Sum_probs=150.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh-------cCCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK-------IGGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ++++|||||+|+||++++++|+++  |++|++++|+. ++.+.       ...++.++++|++|++++.++++       
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEE--GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999  99999988854 33222       12357889999999999888876       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||.....  .+.....++++.       .+++|+.++.++++++    ++.+.++||++||..+.....+  
T Consensus        82 ~id~lv~nAg~~~~~--~~~~~~~~~~~~-------~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  150 (246)
T 3osu_A           82 SLDVLVNNAGITRDN--LLMRMKEQEWDD-------VIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG--  150 (246)
T ss_dssp             CCCEEEECCCCCCCC--CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC--
Confidence            799999999975431  111222222333       3489999999888887    5567789999999876443322  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                         ...|+.+|...+.+.+       ..|+++++++||++.++....  ...........+  ...+.+++|+|++++.+
T Consensus       151 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p--~~r~~~~~dva~~v~~l  225 (246)
T 3osu_A          151 ---QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIP--LARFGQDTDIANTVAFL  225 (246)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCT--TCSCBCHHHHHHHHHHH
T ss_pred             ---ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCC--CCCCcCHHHHHHHHHHH
Confidence               2569999999887665       468999999999998875321  000000000011  13457899999999999


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +.++.  ..|++|++.+
T Consensus       226 ~s~~~~~itG~~i~vdg  242 (246)
T 3osu_A          226 ASDKAKYITGQTIHVNG  242 (246)
T ss_dssp             TSGGGTTCCSCEEEEST
T ss_pred             hCccccCCCCCEEEeCC
Confidence            87654  3589999987

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.91  E-value=8.1e-25  Score=185.56  Aligned_cols=189  Identities=15%  Similarity=0.124  Sum_probs=141.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC--CcEEEccCCCcccHHHHhc---CCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA--DDLFIGDIRDSNSIIPAIQ---GIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~--~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~ag~  157 (331)
                      |+||||||+|+||++++++|+++    +|++++|++++.+.+...  ..++.+|++|++++.++++   ++|+||||||.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   76 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGK   76 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            57999999999999999999886    899999987665543221  1788999999999999998   89999999997


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHH
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAE  237 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e  237 (331)
                      ....  .+......+++..+       ++|+.++.++++++++.+.++||++||..++.+..+     ...|+.+|..+|
T Consensus        77 ~~~~--~~~~~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~-----~~~Y~~sK~a~~  142 (207)
T 2yut_A           77 AGRA--SVREAGRDLVEEML-------AAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPG-----FAAYAAAKGALE  142 (207)
T ss_dssp             CCCB--CSCC---CHHHHHH-------HHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTT-----BHHHHHHHHHHH
T ss_pred             CCCC--ChhhCCHHHHHHHH-------HHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC-----cchHHHHHHHHH
Confidence            4321  11112223333333       889999999999997777889999999876543322     257999999998


Q ss_pred             HHHHh-------cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCccc
Q 046297          238 QYLAD-------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       238 ~~~~~-------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                      .+.+.       .+++++++|||+++++..      .+..    .....+++++|+|++++.+++++..
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~------~~~~----~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLW------APLG----GPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGG------GGGT----SCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCc------cccC----CCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            87652       589999999999998751      1111    1125689999999999999987643

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=6.5e-24  Score=186.27  Aligned_cols=216  Identities=14%  Similarity=0.071  Sum_probs=151.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC---CCcEEEccCCCcccHHHHhc-------CCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG---ADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~---~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++ +++..   . .++++|++|++++.++++       ++|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD   79 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVD   79 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            45688999999999999999999999  9999999998766 33211   3 789999999998888775       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +||||||.....  .+.....++++       ..+++|+.++.++++++.    +.+.++||++||..+..+..+     
T Consensus        80 ~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----  145 (256)
T 2d1y_A           80 VLVNNAAIAAPG--SALTVRLPEWR-------RVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE-----  145 (256)
T ss_dssp             EEEECCCCCCCB--CTTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT-----
T ss_pred             EEEECCCCCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC-----
Confidence            999999975321  11111111222       334889999888877664    456789999999876543322     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhh-ccCCc-cccC--CcccccCHHHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELL-VGKDD-ELLQ--TETRTIARADVAEVCIQ  292 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~-~~~~~-~~~~--~~~~~i~v~Dva~~~~~  292 (331)
                      ...|+.+|...+.+.+       ..++++++++||++.++.....  ... ..... .+..  ....+++++|+|++++.
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~  225 (256)
T 2d1y_A          146 NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF  225 (256)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            2579999999987765       2589999999999987632110  000 00000 0100  11347899999999999


Q ss_pred             HhcCcc--cCCceEEeccCCCCCCCC
Q 046297          293 ALQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      ++.++.  ..|+.|++.+   |...+
T Consensus       226 l~s~~~~~~~G~~~~v~g---G~~~~  248 (256)
T 2d1y_A          226 LASEKASFITGAILPVDG---GMTAS  248 (256)
T ss_dssp             HHSGGGTTCCSCEEEEST---TGGGB
T ss_pred             HhCchhcCCCCCEEEECC---Ccccc
Confidence            987653  4688999998   65443

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.91  E-value=3.3e-23  Score=181.01  Aligned_cols=213  Identities=11%  Similarity=0.023  Sum_probs=146.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh----cCCCCcEEEccCCCcccHHHHhc-------C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++ ++.++    ...++.++++|++|++++.++++       +
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            44688999999999999999999999  99999999987 54432    23457889999999998887764       7


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|+||||||.....  .+.....+++       ...+++|+.++.+++++    +++.+.++||++||..++.+..+   
T Consensus        83 id~lv~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  150 (249)
T 2ew8_A           83 CDILVNNAGIYPLI--PFDELTFEQW-------KKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA---  150 (249)
T ss_dssp             CCEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS---
T ss_pred             CCEEEECCCCCCCC--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC---
Confidence            99999999974321  0111111222       23348899997666665    66667789999999877543322   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hhh-hhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IRE-LLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                        ...|..+|...+.+.+       ..++++++|+||++.++... ... ........+......+.+++|+|++++.++
T Consensus       151 --~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~  228 (249)
T 2ew8_A          151 --YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLA  228 (249)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHT
T ss_pred             --chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHc
Confidence              2569999999987765       25899999999999887532 100 000000000011124689999999999998


Q ss_pred             cCcc--cCCceEEecc
Q 046297          295 QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~  308 (331)
                      ..+.  ..|+.+++.+
T Consensus       229 s~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          229 SDDASFITGQTLAVDG  244 (249)
T ss_dssp             SGGGTTCCSCEEEESS
T ss_pred             CcccCCCCCcEEEECC
Confidence            7643  4688999987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=6.6e-24  Score=190.26  Aligned_cols=229  Identities=12%  Similarity=0.080  Sum_probs=160.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CC---CCcEEEccCCCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GG---ADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~---~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +.+++||||||+|+||+++++.|+++  |++|++++|++++.+++       ..   ++.++.+|++|++++.++++   
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999  99999999987655432       12   47789999999999888876   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||........+.....+++       ...+++|+.++.++++++.    +.+ ++||++||..+....
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~  173 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLADGTANTDQPVELY-------QKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA  173 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC
T ss_pred             HhcCCCCEEEECCCcCcCCCCccccCCHHHH-------HHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC
Confidence                799999999964321100111111122       2344889999888777764    345 799999998765433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----------hhhccCCccccCCcccc
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----------ELLVGKDDELLQTETRT  280 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----------~~~~~~~~~~~~~~~~~  280 (331)
                      .+    ....|+.+|..++.+.+       ..|+++++|+||++.++.....           ..........+  ...+
T Consensus       174 ~~----~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~r~  247 (297)
T 1xhl_A          174 HS----GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP--VGHC  247 (297)
T ss_dssp             CT----TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT--TSSC
T ss_pred             CC----CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCC--CCCC
Confidence            11    12569999999887765       3689999999999988742211           00111111111  1246


Q ss_pred             cCHHHHHHHHHHHhcCc---ccCCceEEeccCCCCCCCCHHHHHHHHHHh
Q 046297          281 IARADVAEVCIQALQFE---EAKFKAFDLASKPEGTGTPTKDFKALFSQI  327 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~---~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~  327 (331)
                      .+++|+|++++.++..+   ...|+.+++.+   |......+.+..+.++
T Consensus       248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdG---G~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          248 GKPEEIANIIVFLADRNLSSYIIGQSIVADG---GSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEEST---TGGGCCGGGGSCHHHH
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCcEEEECC---Cccccccccccchhhh
Confidence            89999999999998765   25688999998   7666666655555444

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.91  E-value=6.6e-23  Score=183.25  Aligned_cols=217  Identities=16%  Similarity=0.039  Sum_probs=155.2

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc---CCCE
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ---GIDA  150 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~---~~d~  150 (331)
                      .+..+++||||||+|+||++++++|+++  |++|++++|++++.+..    ..++.++.+|++|++++.++++   ++|+
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~   89 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADV   89 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            3456789999999999999999999999  99999999998765543    3357899999999999999987   5799


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCC-------CC
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL-------NS  223 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~-------~~  223 (331)
                      ||||||.....    .....++++..+       ++|+.++.++++++.....++||++||..+.......       .+
T Consensus        90 lv~nAg~~~~~----~~~~~~~~~~~~-------~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~  158 (291)
T 3rd5_A           90 LINNAGIMAVP----YALTVDGFESQI-------GTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRR  158 (291)
T ss_dssp             EEECCCCCSCC----CCBCTTSCBHHH-------HHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSC
T ss_pred             EEECCcCCCCc----ccCCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccC
Confidence            99999975421    122334444444       9999999999999998877899999998654322111       11


Q ss_pred             C-CcchHHHHHHHHHHHHH-------hcC--CCEEEEecCcccCCCcchh-hhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          224 L-GNGNILVWKRKAEQYLA-------DSG--IPYTIIRAGGLQDKEGGIR-ELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       224 ~-~~~~y~~sK~~~e~~~~-------~~~--~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      + +...|+.+|...+.+.+       ..+  +++++++||++.++..... ..........+ .++-..+++|+|+.++.
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~A~~~~~  237 (291)
T 3rd5_A          159 YSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAA-TRVVATDADFGARQTLY  237 (291)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------CHHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHH-HHHHhCCHHHHHHHHHH
Confidence            1 12579999999887664       235  9999999999988753211 00000000000 11223468999999999


Q ss_pred             HhcCcccCCceEEecc
Q 046297          293 ALQFEEAKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~~~~~~~~i~~  308 (331)
                      ++.++...|+.|.+.+
T Consensus       238 l~~~~~~~G~~~~vdg  253 (291)
T 3rd5_A          238 AASQDLPGDSFVGPRF  253 (291)
T ss_dssp             HHHSCCCTTCEEEETT
T ss_pred             HHcCCCCCCceeCCcc
Confidence            9988767788888764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.90  E-value=1.3e-23  Score=183.77  Aligned_cols=213  Identities=17%  Similarity=0.121  Sum_probs=149.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCC-cEEEccCCCcccHHHHh------cCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGAD-DLFIGDIRDSNSIIPAI------QGI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~-~~v~~Dl~d~~~~~~~l------~~~  148 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+.+    ...+ .++.+|++|++++.+++      .++
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAAS--GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            45688999999999999999999999  99999999997665433    2335 78999999999988877      479


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||......  +.....+++       ...+++|+.++.++++    .+++.+.++||++||..+......   .
T Consensus        87 d~li~~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---~  154 (254)
T 2wsb_A           87 SILVNSAGIARLHD--ALETDDATW-------RQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP---Q  154 (254)
T ss_dssp             CEEEECCCCCCCBC--STTCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS---S
T ss_pred             cEEEECCccCCCCC--cccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC---C
Confidence            99999999743311  001111111       2234789888655555    455667889999999876543221   1


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      ....|+.+|...|.+.+       ..+++++++|||+++++.....    ..........+  ...+.+++|+|++++.+
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~l  232 (254)
T 2wsb_A          155 FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP--MGRCGEPSEIAAAALFL  232 (254)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST--TSSCBCHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC--CCCCCCHHHHHHHHHHH
Confidence            22579999999987765       2489999999999998743210    00000000011  13468999999999999


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +.++.  ..|+.+++.+
T Consensus       233 ~~~~~~~~~G~~~~v~g  249 (254)
T 2wsb_A          233 ASPAASYVTGAILAVDG  249 (254)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCcccccccCCEEEECC
Confidence            87643  4688999986

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.90  E-value=4e-23  Score=181.25  Aligned_cols=213  Identities=15%  Similarity=0.138  Sum_probs=156.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|+.++.+++       ..++.++.+|++|++++.++++      
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999  99999999987655432       3458889999999999888876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||......  + ....++++       ..+++|+.++.++++++    ++.+..+||++||..+..+..+ 
T Consensus        88 g~id~lv~nAg~~~~~~--~-~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  156 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKP--F-DMPMSDFE-------WAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR-  156 (256)
T ss_dssp             SCCCEEEECCCCCCCCC--T-TCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT-
T ss_pred             CCCCEEEECCCCCCCCC--C-CCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC-
Confidence             7999999999754311  1 11222223       33488999988888876    4556679999999887544322 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc------hhhhhccCCccccCCcccccCHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG------IRELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~------~~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                          ...|+.+|...+.+.+       ..++++++++||++.++...      ....+...   .+  ...+.+++|+|+
T Consensus       157 ----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---~p--~~r~~~~~dva~  227 (256)
T 3gaf_A          157 ----MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKH---TP--LGRLGEAQDIAN  227 (256)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTT---CT--TSSCBCHHHHHH
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhc---CC--CCCCCCHHHHHH
Confidence                2579999999987765       35899999999999886421      01111110   11  134679999999


Q ss_pred             HHHHHhcCcc--cCCceEEeccCCCCCCCCH
Q 046297          289 VCIQALQFEE--AKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~  317 (331)
                      +++.++....  ..|+++++.+   |...++
T Consensus       228 ~~~~L~s~~~~~itG~~i~vdg---G~~~~~  255 (256)
T 3gaf_A          228 AALFLCSPAAAWISGQVLTVSG---GGVQEL  255 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST---TSCCC-
T ss_pred             HHHHHcCCcccCccCCEEEECC---CccccC
Confidence            9999987653  4689999998   766554

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.90  E-value=1.7e-23  Score=187.05  Aligned_cols=217  Identities=16%  Similarity=0.151  Sum_probs=156.2

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C----CCCcEEEccCCCcccHHHHhc---
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G----GADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~----~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      .+..+++||||||+|+||++++++|+++  |++|++++|++++.+++    .    ..+.++++|++|++++.++++   
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            3445789999999999999999999999  99999999998765442    1    357889999999998887765   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCC-CC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGT-NL  217 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~-~~  217 (331)
                          ++|+||||||.....  .+.....++++..       +++|+.++.++++++    ++.+.++||++||..+. ..
T Consensus       115 ~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~-------~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~  185 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEA--RLDTMTPEQLSEV-------LDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG  185 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCC--CTTTCCHHHHHHH-------HHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB
T ss_pred             HHcCCCCEEEECCCCCCCC--CcccCCHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC
Confidence                689999999975432  1112222233333       489999998888876    46677899999998763 22


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      ..     ....|+.+|..++.+.+       ..|+++++|+||+++++....  ...........+  ...+..++|+|+
T Consensus       186 ~~-----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p--~~r~~~p~dvA~  258 (293)
T 3rih_A          186 YP-----GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIP--MGMLGSPVDIGH  258 (293)
T ss_dssp             CT-----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTST--TSSCBCHHHHHH
T ss_pred             CC-----CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCC--CCCCCCHHHHHH
Confidence            21     12579999999887765       368999999999999864210  011100001111  123568999999


Q ss_pred             HHHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          289 VCIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +++.++....  ..|+++++.+   |...
T Consensus       259 ~v~fL~s~~a~~itG~~i~vdG---G~~~  284 (293)
T 3rih_A          259 LAAFLATDEAGYITGQAIVVDG---GQVL  284 (293)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST---TTTC
T ss_pred             HHHHHhCccccCCCCCEEEECC---CccC
Confidence            9999987653  4689999987   6544

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.90  E-value=2.2e-23  Score=182.05  Aligned_cols=212  Identities=12%  Similarity=0.035  Sum_probs=147.8

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc---CCCEE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ---GIDAL  151 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~---~~d~V  151 (331)
                      ...+++||||||+|+||++++++|+++  |++|++++|+.++.+.    +...+.++.+|++|.+.+.++++   ++|+|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            345789999999999999999999999  9999999999876554    34568899999999999998887   68999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||......  +......+++..+       ++|+.++.++++++    ++.+.++||++||..++....+     ..
T Consensus        89 i~~Ag~~~~~~--~~~~~~~~~~~~~-------~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~  154 (249)
T 3f9i_A           89 VCNAGITSDTL--AIRMKDQDFDKVI-------DINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG-----QA  154 (249)
T ss_dssp             EECCC---------------CHHHHH-------HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC-----SH
T ss_pred             EECCCCCCCCc--cccCCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC-----Cc
Confidence            99999754321  1122233344444       88999988877765    4456679999999887544322     25


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      .|+.+|...+.+.+       ..++++++++||++.++.....  ..........  ....+.+++|+|++++.++.++.
T Consensus       155 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~  232 (249)
T 3f9i_A          155 NYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKI--PLGTYGIPEDVAYAVAFLASNNA  232 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHC--TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHcCCcc
Confidence            69999999887665       3689999999999988753210  0000000001  12346889999999999998654


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..|+.|++.+
T Consensus       233 ~~~tG~~~~vdg  244 (249)
T 3f9i_A          233 SYITGQTLHVNG  244 (249)
T ss_dssp             TTCCSCEEEEST
T ss_pred             CCccCcEEEECC
Confidence              4689999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.90  E-value=3.1e-23  Score=182.62  Aligned_cols=218  Identities=13%  Similarity=0.059  Sum_probs=152.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+.++.++    +..++.++.+|++|++++.++++       ++
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            45688999999999999999999999  9999999998766543    33468899999999999988886       89


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----------CCCeEEEEccCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----------GAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~vk~~v~~SS~~~~~~~  218 (331)
                      |+||||||....... .+..  ...+...++....+++|+.++.++++++...          +.++||++||..+..+.
T Consensus        88 d~li~~Ag~~~~~~~-~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           88 DVAVNCAGIAVASKT-YNLK--KGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  164 (265)
T ss_dssp             CEEEECCCCCCCCCS-EETT--TTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             CEEEECCccCCCCcc-cccc--ccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence            999999997432110 0000  0000111112234488999999998887654          56799999998765433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhcc-CCccccCCcccccCHHHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVG-KDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~-~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      .+     ...|..+|...+.+.+       ..++++++++||++.++..... ..... .....+. ...+.+++|+|++
T Consensus       165 ~~-----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~  238 (265)
T 2o23_A          165 VG-----QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPF-PSRLGDPAEYAHL  238 (265)
T ss_dssp             TT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSS-SCSCBCHHHHHHH
T ss_pred             CC-----CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCC-cCCCCCHHHHHHH
Confidence            22     2569999998887665       3589999999999988753210 00000 0000111 1346899999999


Q ss_pred             HHHHhcCcccCCceEEecc
Q 046297          290 CIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~~~~~~~~i~~  308 (331)
                      ++.++..+...|+.+++.+
T Consensus       239 ~~~l~~~~~~~G~~i~vdg  257 (265)
T 2o23_A          239 VQAIIENPFLNGEVIRLDG  257 (265)
T ss_dssp             HHHHHHCTTCCSCEEEEST
T ss_pred             HHHHhhcCccCceEEEECC
Confidence            9999987667789999987

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.90  E-value=3.1e-23  Score=182.36  Aligned_cols=216  Identities=13%  Similarity=-0.001  Sum_probs=150.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh-c-CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-I-GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-l-~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      ++.+++||||||+|+||++++++|+++  |++|++++|++++..+ + ..++.++.+|++|++++.++++       ++|
T Consensus        24 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD  101 (260)
T 3gem_A           24 TLSSAPILITGASQRVGLHCALRLLEH--GHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLR  101 (260)
T ss_dssp             ---CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            345789999999999999999999999  9999999999865432 2 1247899999999999888875       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +||||||......          .+...++-...+++|+.++.++++++.    +.+..+||++||..+..+..+     
T Consensus       102 ~lv~nAg~~~~~~----------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----  166 (260)
T 3gem_A          102 AVVHNASEWLAET----------PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK-----  166 (260)
T ss_dssp             EEEECCCCCCCCC----------TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS-----
T ss_pred             EEEECCCccCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC-----
Confidence            9999999743321          111111122344889999888877764    446679999999877544332     


Q ss_pred             cchHHHHHHHHHHHHH----h--cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCccc
Q 046297          226 NGNILVWKRKAEQYLA----D--SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~----~--~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                      ...|+.+|...+.+.+    +  .++++++++||++.++...............+  ...+.+++|+|++++.+++.+..
T Consensus       167 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p--~~r~~~~edva~~v~~L~~~~~i  244 (260)
T 3gem_A          167 HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKSA--LGIEPGAEVIYQSLRYLLDSTYV  244 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------CC--SCCCCCTHHHHHHHHHHHHCSSC
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcCC--CCCCCCHHHHHHHHHHHhhCCCC
Confidence            2569999999887765    2  35999999999998775321111111111111  12346789999999999966657


Q ss_pred             CCceEEeccCCCCCCCC
Q 046297          300 KFKAFDLASKPEGTGTP  316 (331)
Q Consensus       300 ~~~~~~i~~~~~~~~~t  316 (331)
                      .|+++++.+   |..++
T Consensus       245 tG~~i~vdG---G~~~~  258 (260)
T 3gem_A          245 TGTTLTVNG---GRHVK  258 (260)
T ss_dssp             CSCEEEEST---TTTTC
T ss_pred             CCCEEEECC---CcccC
Confidence            789999998   66543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.90  E-value=3.7e-23  Score=182.60  Aligned_cols=219  Identities=15%  Similarity=0.128  Sum_probs=152.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ++.+++||||||+|+||++++++|+++  |++|++++|++++.+++         ..++.++.+|++|++++.++++   
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            345788999999999999999999999  99999999987654432         3457889999999999888876   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||...... .+.....+++       ...+++|+.++..    +++.+++.+.++||++||..+....
T Consensus        88 ~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  159 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQN-PTESFTAAEF-------DKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI  159 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCCB-CGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC
T ss_pred             HHcCCCCEEEECCCcCCCCC-CcccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC
Confidence                6899999999743200 0111111122       2334788877664    4555566678899999998765432


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhccCC-c----cccC--CcccccCH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVGKD-D----ELLQ--TETRTIAR  283 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~-~----~~~~--~~~~~i~v  283 (331)
                      .+     ...|..+|...+.+.+       ..|+++++|+||++.++..... ....... .    .+..  ....+.++
T Consensus       160 ~~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  234 (267)
T 1iy8_A          160 GN-----QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEA  234 (267)
T ss_dssp             SS-----BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCH
T ss_pred             CC-----CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCH
Confidence            22     2579999999887765       3589999999999988642110 0000000 0    0000  01246799


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +|+|++++.++.++.  ..|+.+++.+   |...
T Consensus       235 ~dvA~~v~~l~s~~~~~~tG~~i~vdG---G~~~  265 (267)
T 1iy8_A          235 PEIAAVVAFLLSDDASYVNATVVPIDG---GQSA  265 (267)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEEST---TTTT
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEECC---Cccc
Confidence            999999999987653  4688999987   6543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.90  E-value=2.2e-23  Score=183.25  Aligned_cols=211  Identities=13%  Similarity=0.033  Sum_probs=151.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHh-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAI-------  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l-------  145 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+.+       ..++.++.+|++|++++.+++       
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45688999999999999999999999  99999999987654432       234788999999999888887       


Q ss_pred             -cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          146 -QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       146 -~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                       .++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+.++||++||..+.....+
T Consensus        85 ~g~id~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  155 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYK--EAKDYTVEDYS-------LIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY  155 (260)
T ss_dssp             TTCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT
T ss_pred             CCCCCEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC
Confidence             4699999999974321  01111112222       33488999988888776    4567789999999876543221


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-------hhhhccCCccccCCcccccCHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-------RELLVGKDDELLQTETRTIARADV  286 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~i~v~Dv  286 (331)
                           ...|+.+|..++.+.+       ..++++++++||++.++....       ...+.......+  ...+.+++|+
T Consensus       156 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dv  228 (260)
T 2ae2_A          156 -----EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA--LRRMGEPKEL  228 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST--TCSCBCHHHH
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC--CCCCCCHHHH
Confidence                 2579999999998776       248999999999998763210       000000000011  1347899999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |++++.++..+.  ..|+++++.+
T Consensus       229 A~~v~~l~s~~~~~~tG~~~~vdg  252 (260)
T 2ae2_A          229 AAMVAFLCFPAASYVTGQIIYVDG  252 (260)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHcCccccCCCCCEEEECC
Confidence            999999987643  4688999987

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.90  E-value=9.3e-24  Score=184.45  Aligned_cols=211  Identities=14%  Similarity=0.073  Sum_probs=148.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C--CCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G--GADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~--~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+.+    .  .++.++.+|++|++++.++++       
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            45688999999999999999999999  99999999987654432    2  357899999999999888876       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHcCC-CeEEEEccCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAAGA-KQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~v-k~~v~~SS~~~~~~~~~~  221 (331)
                      ++|+||||||.....  .+.....+++       ...+++|+.++..+.    +.+++.+. ++||++||..++....+ 
T Consensus        82 ~id~li~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  151 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNK--SVEETTTAEW-------RKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS-  151 (251)
T ss_dssp             SCCEEEECCCCCCCC--CTTTCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT-
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC-
Confidence            499999999974321  0111111122       233478888765554    44556666 79999999876543322 


Q ss_pred             CCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchh--hhhcc-CCccccCCcccccCHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIR--ELLVG-KDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~--~~~~~-~~~~~~~~~~~~i~v~Dva~~  289 (331)
                          ...|+.+|...+.+.+         ..+++++++|||+++++.....  ..... .....+  ...+++++|+|++
T Consensus       152 ----~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~  225 (251)
T 1zk4_A          152 ----LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTP--MGHIGEPNDIAYI  225 (251)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCT--TSSCBCHHHHHHH
T ss_pred             ----CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCC--CCCCcCHHHHHHH
Confidence                2579999999887654         4589999999999998742210  00000 000111  1246899999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.++.  ..|+.|++.+
T Consensus       226 ~~~l~~~~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          226 CVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHcCcccccccCcEEEECC
Confidence            999997653  4588999987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.90  E-value=9.1e-24  Score=184.24  Aligned_cols=207  Identities=13%  Similarity=0.087  Sum_probs=147.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++||||||+|+||++++++|+++  |++|++++| ++++.+++       ..++.++++|++|++++.++++      
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQ--GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999  999999999 65443321       3357889999999999988876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||.....  .+.....+++       ...+++|+.++..+.    +.+++.+.++||++||..+.....  
T Consensus        81 g~id~lv~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  149 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDN--LLMRMKEEEW-------DTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP--  149 (246)
T ss_dssp             SCCCEEEECCCCCCCB--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT--
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC--
Confidence             799999999974321  0111111122       233488998855554    445566778999999986543322  


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                         ....|..+|...+.+.+       ..++++++++||++.++....     ...+..   ..+  ...+.+++|+|++
T Consensus       150 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~p--~~~~~~~~dvA~~  221 (246)
T 2uvd_A          150 ---GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLK---LIP--AAQFGEAQDIANA  221 (246)
T ss_dssp             ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHH---TCT--TCSCBCHHHHHHH
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHh---cCC--CCCCcCHHHHHHH
Confidence               12569999999887654       368999999999998764221     000000   011  1246899999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.++.  ..|+.+++.+
T Consensus       222 ~~~l~s~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          222 VTFFASDQSKYITGQTLNVDG  242 (246)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHcCchhcCCCCCEEEECc
Confidence            999987653  4688999987

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.90  E-value=5.7e-24  Score=186.19  Aligned_cols=214  Identities=18%  Similarity=0.133  Sum_probs=130.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|++++.+++       ...+.++.+|++|++++.++++      
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34688999999999999999999999  99999999997665443       2347889999999999888876      


Q ss_pred             -CCCEEEEcccCCCCCCC-CCCCCCCCCCccccccCCCcceehHHHHH----HHHHHHHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKP-DFDPAKGGRPEFYFEEGAYPEQVDWIGQK----NQIDAAKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                       ++|+||||||....... .+.....++++       ..+++|+.++.    .+++.+++.+.++||++||..++..   
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  154 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYK-------KFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY---  154 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHH-------HHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC---
Confidence             79999999997432110 01111122222       33488999954    4555556667789999999987521   


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh---hhccCCccccCCcccccCHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE---LLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                           ...|+.+|...+.+.+       ..++++++++||++.++......   .........+  ...+.+++|+|+++
T Consensus       155 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~  227 (253)
T 3qiv_A          155 -----SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLP--LSRMGTPDDLVGMC  227 (253)
T ss_dssp             ----------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------CCHHHHHH
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCC--CCCCCCHHHHHHHH
Confidence                 1348899998887665       24799999999999987532110   0000000011  12356789999999


Q ss_pred             HHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          291 IQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +.++.++.  ..|++|++.+   |..+
T Consensus       228 ~~l~s~~~~~~tG~~~~vdg---G~~~  251 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDG---GQII  251 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC---------
T ss_pred             HHHcCccccCCCCCEEEECC---Ceec
Confidence            99987654  3689999998   6543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.90  E-value=5.3e-24  Score=185.27  Aligned_cols=206  Identities=15%  Similarity=0.130  Sum_probs=145.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhhc-------CCCCcE-EEccCCCcccHHHHhc------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI-------GGADDL-FIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~l-------~~~~~~-v~~Dl~d~~~~~~~l~------  146 (331)
                      +++||||||+|+||++++++|+++  |++|+++ .|++++.+.+       ..++.+ +.+|++|++++.++++      
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAED--GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            368999999999999999999999  9999998 7876554432       234566 8999999998888764      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||.....  .+......++       ...+++|+.+    ++.+++.+++.+.++||++||..+.....+ 
T Consensus        79 ~~~d~li~~Ag~~~~~--~~~~~~~~~~-------~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  148 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDT--LLVRMKDEDW-------EAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG-  148 (245)
T ss_dssp             TCCCEEEECCCCCCCB--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS-
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHH-------HHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC-
Confidence             799999999974321  0001111122       2334889888    555566666778889999999865433221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                          ...|..+|...+.+.+       ..+++++++|||+++++....     ...+...   .+  ...+++++|+|++
T Consensus       149 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---~~--~~~~~~~~dva~~  219 (245)
T 2ph3_A          149 ----QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQ---IP--AGRFGRPEEVAEA  219 (245)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHT---CT--TCSCBCHHHHHHH
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhc---CC--CCCCcCHHHHHHH
Confidence                2569999998887665       248999999999998764211     0001000   11  1346899999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.++.  ..|+.|++.+
T Consensus       220 ~~~l~~~~~~~~~G~~~~v~g  240 (245)
T 2ph3_A          220 VAFLVSEKAGYITGQTLCVDG  240 (245)
T ss_dssp             HHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHhCcccccccCCEEEECC
Confidence            999997653  3588999987

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.90  E-value=6.7e-24  Score=187.70  Aligned_cols=212  Identities=16%  Similarity=0.129  Sum_probs=151.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhh----c---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQK----I---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~----l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++| ++++.+.    +   ..++.++.+|++|++++.++++     
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999  999999999 5444332    1   3457889999999999988886     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCC-CCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGT-NLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~-~~~~~  220 (331)
                        ++|+||||||......  +......++       ...+++|+.++.++++++.+.   + ++||++||..++ .... 
T Consensus        97 ~~~~d~vi~~Ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~-  165 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCD--ELEVTQELF-------DKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIP-  165 (274)
T ss_dssp             HSCEEEEECCCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCC-
T ss_pred             cCCCCEEEECCCCCCCcc--cccCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCC-
Confidence              7999999999643210  001111112       233488999999999988765   4 699999998765 3221 


Q ss_pred             CCCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcch--hhhhc----cCC-ccc------cCCcccc
Q 046297          221 LNSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGI--RELLV----GKD-DEL------LQTETRT  280 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~--~~~~~----~~~-~~~------~~~~~~~  280 (331)
                          ....|+.+|...|.+.+.       .+++++++|||+++++....  .....    +.. ...      ......+
T Consensus       166 ----~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (274)
T 1ja9_A          166 ----NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRI  241 (274)
T ss_dssp             ----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSC
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCc
Confidence                125699999999987652       48999999999998764220  00000    000 000      0112357


Q ss_pred             cCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          281 IARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++|+|++++.++.++.  ..|++|++.+
T Consensus       242 ~~~~dva~~i~~l~~~~~~~~~G~~~~v~g  271 (274)
T 1ja9_A          242 GYPADIGRAVSALCQEESEWINGQVIKLTG  271 (274)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCcccccccCcEEEecC
Confidence            899999999999998654  3688999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.90  E-value=2.4e-23  Score=182.58  Aligned_cols=213  Identities=13%  Similarity=0.047  Sum_probs=149.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhhc---CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQKI---GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~l---~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+++.  .+++   ..++.++.+|++|++++.++++       +
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            34688999999999999999999999  9999999998752  1222   2347788999999999998887       8


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|+||||||.....  .+.....+++       ...+++|+.++..    +++.+++.+.++||++||..+.....+   
T Consensus        80 id~lv~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  147 (255)
T 2q2v_A           80 VDILVNNAGIQHVA--PVEQFPLESW-------DKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG---  147 (255)
T ss_dssp             CSEEEECCCCCCCB--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC---
Confidence            99999999964321  0111111122       2334788886554    455556777889999999876543322   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh---hhccC-C----ccc-c--CCcccccCHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE---LLVGK-D----DEL-L--QTETRTIARAD  285 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~---~~~~~-~----~~~-~--~~~~~~i~v~D  285 (331)
                        ...|..+|...+.+.+       ..++++++|+||++.++......   ...+. .    ..+ .  .....+++++|
T Consensus       148 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  225 (255)
T 2q2v_A          148 --KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEH  225 (255)
T ss_dssp             --BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHH
T ss_pred             --chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHH
Confidence              2569999999887765       25899999999999987532110   00000 0    001 0  01235789999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|++++.++..+.  ..|+.|++.+
T Consensus       226 vA~~~~~l~s~~~~~~tG~~~~vdg  250 (255)
T 2q2v_A          226 LGELVLFLCSEAGSQVRGAAWNVDG  250 (255)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCCccCCCCCCEEEECC
Confidence            9999999987654  3588999987

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.90  E-value=1.9e-23  Score=183.94  Aligned_cols=218  Identities=12%  Similarity=0.069  Sum_probs=151.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hh-------cCCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QK-------IGGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~-------l~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++||||||+|+||++++++|+++  |++|++++|+.+.. +.       ...++.++++|++|++++.++++       
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAK--GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999  99999998875432 11       12357899999999999988876       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||........+.....++++       ..+++|+.++.++++++    ++.+..+||++||.+.... .+..
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-~~~~  156 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWN-------EMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA-PGWI  156 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC-CCCT
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHH-------HHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc-CCCC
Confidence            7999999999422211111111122222       33488999988888877    6667789999999854311 1111


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                        ....|+.+|...+.+.+       ..++++++++||++.++...  ............+  ...+.+++|+|++++.+
T Consensus       157 --~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p--~~r~~~~~dva~~v~~l  232 (264)
T 3i4f_A          157 --YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTP--IGRSGTGEDIARTISFL  232 (264)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC----------CCCCHHHHHHHHHHH
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCC--CCCCcCHHHHHHHHHHH
Confidence              22579999999887765       36899999999999887532  1111111111111  12457899999999999


Q ss_pred             hcCcc--cCCceEEeccCCCCCCCC
Q 046297          294 LQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      +..+.  ..|+++++.+   |....
T Consensus       233 ~s~~~~~itG~~i~vdG---G~~~~  254 (264)
T 3i4f_A          233 CEDDSDMITGTIIEVTG---AVDVI  254 (264)
T ss_dssp             HSGGGTTCCSCEEEESC---SCCCC
T ss_pred             cCcccCCCCCcEEEEcC---ceeec
Confidence            98654  4689999998   65443

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.90  E-value=2.4e-23  Score=184.75  Aligned_cols=214  Identities=17%  Similarity=0.124  Sum_probs=152.1

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++.+++||||||+|+||+++++.|+++  |++|++++|++++.+++       ..++.++.+|++|++++.++++     
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            345688999999999999999999999  99999999987654432       3357889999999999888776     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc------CCCeEEEEccCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA------GAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~------~vk~~v~~SS~~~~~~~  218 (331)
                        ++|+||||||.....  .+.....+++       ...+++|+.++.++++++...      +.++||++||..+....
T Consensus        97 ~g~iD~lv~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  167 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGG--ATAELADELW-------LDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV  167 (277)
T ss_dssp             TCSCSEEEECCCCCCCS--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC
T ss_pred             hCCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC
Confidence              699999999974321  0111111122       233488999998888886543      66799999998765432


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h---hhc----cCC-cccc--CCcccc
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E---LLV----GKD-DELL--QTETRT  280 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~---~~~----~~~-~~~~--~~~~~~  280 (331)
                      .+     ...|+.+|..++.+.+       ..++++++|+||++.++..... .   ...    +.. ..+.  .....+
T Consensus       168 ~~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  242 (277)
T 2rhc_B          168 VH-----AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRY  242 (277)
T ss_dssp             TT-----CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSC
T ss_pred             CC-----CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCC
Confidence            21     2569999999887765       2589999999999988742210 0   000    000 0000  011347


Q ss_pred             cCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          281 IARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++|+|++++.++.++.  ..|+++++.+
T Consensus       243 ~~~~dvA~~v~~l~s~~~~~~tG~~~~vdG  272 (277)
T 2rhc_B          243 VQPSEVAEMVAYLIGPGAAAVTAQALNVCG  272 (277)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence            899999999999987653  4688999987

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.90  E-value=3.1e-23  Score=184.06  Aligned_cols=215  Identities=17%  Similarity=0.116  Sum_probs=154.0

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .+..+++||||||+|+||++++++|+++  |++|++++|++++.++    +...+.++++|++|++++.++++       
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3456789999999999999999999999  9999999999766544    34568899999999998888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||.....  .+.....++++.       .+++|+.++..+++++.    +.+..+||++||..+.....+  
T Consensus       103 ~iD~lvnnAg~~~~~--~~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--  171 (277)
T 3gvc_A          103 GVDKLVANAGVVHLA--SLIDTTVEDFDR-------VIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG--  171 (277)
T ss_dssp             SCCEEEECCCCCCCB--CTTTCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--
Confidence            789999999975432  111222223333       34899999887777764    456679999999877543322  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh-hccCC-cccc----C-CcccccCHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL-LVGKD-DELL----Q-TETRTIARADVAE  288 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~-~~~~~-~~~~----~-~~~~~i~v~Dva~  288 (331)
                         ...|+.+|...+.+.+       ..|+++++|+||++.++....... ..+.. ....    . ....+.+++|+|+
T Consensus       172 ---~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  248 (277)
T 3gvc_A          172 ---TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAG  248 (277)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHH
Confidence               2579999999887765       368999999999998874221100 00000 0000    0 0124678999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.++.  ..|+++++.+
T Consensus       249 ~v~~L~s~~a~~itG~~i~vdG  270 (277)
T 3gvc_A          249 IVVFLLSDDASMITGTTQIADG  270 (277)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHcCCccCCccCcEEEECC
Confidence            9999997653  4689999987

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=4.6e-24  Score=188.38  Aligned_cols=213  Identities=14%  Similarity=0.090  Sum_probs=151.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC-----CCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG-----GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~-----~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|++++.++    +.     .++.++.+|++|++++.++++     
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999  9999999998765432    21     236789999999999888775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHH----HHHHHHHHHcC---CCeEEEEccCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQ----KNQIDAAKAAG---AKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~----~~ll~aa~~~~---vk~~v~~SS~~~~~~  217 (331)
                        ++|+||||||...          ..+++..+       ++|+.++    +.+++.+++.+   .++||++||..+..+
T Consensus        84 ~g~id~lv~~Ag~~~----------~~~~~~~~-------~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  146 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----------EKNWEKTL-------QINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP  146 (267)
T ss_dssp             HSCCCEEEECCCCCC----------SSSHHHHH-------HHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC
T ss_pred             cCCCCEEEECCCCCC----------hhhHHHHH-------hHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC
Confidence              5799999999632          12333333       7787754    45556665543   579999999887543


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchh--hhhccCCc----cc--cCCcccc
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDD----EL--LQTETRT  280 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~----~~--~~~~~~~  280 (331)
                      ..+     ...|..+|..++.+.+         ..++++++|+||++.++.....  ....+...    .+  +.....+
T Consensus       147 ~~~-----~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (267)
T 2gdz_A          147 VAQ-----QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGI  221 (267)
T ss_dssp             CTT-----CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCC
T ss_pred             CCC-----CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccC
Confidence            322     2569999998876554         3689999999999987632110  00000000    00  0011346


Q ss_pred             cCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHH
Q 046297          281 IARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDF  320 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~  320 (331)
                      ++++|+|++++.++.++...|+++++.+   ++..++.|+
T Consensus       222 ~~~~dvA~~v~~l~s~~~~~G~~~~v~g---g~~~~~~~~  258 (267)
T 2gdz_A          222 LDPPLIANGLITLIEDDALNGAIMKITT---SKGIHFQDY  258 (267)
T ss_dssp             BCHHHHHHHHHHHHHCTTCSSCEEEEET---TTEEEECCC
T ss_pred             CCHHHHHHHHHHHhcCcCCCCcEEEecC---CCcccccCc
Confidence            8999999999999987777889999998   776666553

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.90  E-value=3.5e-23  Score=183.61  Aligned_cols=210  Identities=15%  Similarity=0.084  Sum_probs=150.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C--CCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G--GADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~--~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++    .  .++.++.+|++|++++.++++       
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEA--GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            45688999999999999999999999  99999999987654432    2  257788999999998888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCC----CeEEEEccCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGA----KQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v----k~~v~~SS~~~~~~~  218 (331)
                      ++|+||||||.....  .+.....++++.       .+++|+.++.++++++    ++.+.    ++||++||..+....
T Consensus       105 ~iD~lvnnAg~~~~~--~~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~  175 (276)
T 2b4q_A          105 RLDILVNNAGTSWGA--ALESYPVSGWEK-------VMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM  175 (276)
T ss_dssp             CCSEEEECCCCCCCC--CTTSCCSHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC
Confidence            799999999974331  111122222233       3388999986666654    44454    799999998765432


Q ss_pred             CCCCCCCcc-hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----hhhccCCccccCCcccccCHHH
Q 046297          219 HPLNSLGNG-NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDELLQTETRTIARAD  285 (331)
Q Consensus       219 ~~~~~~~~~-~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~i~v~D  285 (331)
                      ...     . .|+.+|..++.+.+       ..++++++|+||++.++.....     ..+... ...+  ...+.+++|
T Consensus       176 ~~~-----~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~p--~~r~~~p~d  247 (276)
T 2b4q_A          176 GEQ-----AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADS-ASIP--MGRWGRPEE  247 (276)
T ss_dssp             CCS-----CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHH-HTST--TSSCCCHHH
T ss_pred             CCC-----ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhh-cCCC--CCCcCCHHH
Confidence            221     2 59999999987765       3589999999999988753211     001000 0111  124689999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|++++.++.++.  ..|+++++.+
T Consensus       248 vA~~v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          248 MAALAISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCccccCCCCCEEEeCC
Confidence            9999999997653  4688999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.90  E-value=5.5e-23  Score=182.75  Aligned_cols=214  Identities=15%  Similarity=0.099  Sum_probs=141.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ...++++|||||+|+||++++++|+++  |++|++++| +++..++       ...++.++++|++|++++.++++    
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            345688999999999999999999999  999999996 4433322       23458899999999999988886    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC---CCeEEEEccCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG---AKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~---vk~~v~~SS~~~~~  216 (331)
                         ++|+||||||........+.....++++.       .+++|+.++.++++++.    +.+   ..+||++||..+..
T Consensus       104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~  176 (280)
T 4da9_A          104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDT-------IVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM  176 (280)
T ss_dssp             HHSCCCEEEEECC------CCGGGCCHHHHHH-------HTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----
T ss_pred             HcCCCCEEEECCCccccCCCChhhCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc
Confidence               79999999997422111111222223333       34899999887777664    333   45899999987654


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccC---CcccccCHHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQ---TETRTIARADV  286 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~---~~~~~i~v~Dv  286 (331)
                      ...+     ...|+.+|...+.+.+       ..++++++++||++.++.....  .......+..   ....+.+++|+
T Consensus       177 ~~~~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p~~r~~~pedv  249 (280)
T 4da9_A          177 TSPE-----RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV--SGKYDGLIESGLVPMRRWGEPEDI  249 (280)
T ss_dssp             ---C-----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHHHH
T ss_pred             CCCC-----ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc--chhHHHHHhhcCCCcCCcCCHHHH
Confidence            3322     2569999999887765       2689999999999988753211  0000000000   01345789999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |++++.++.++.  ..|+++++.+
T Consensus       250 A~~v~~L~s~~~~~itG~~i~vdG  273 (280)
T 4da9_A          250 GNIVAGLAGGQFGFATGSVIQADG  273 (280)
T ss_dssp             HHHHHHHHTSTTGGGTTCEEEEST
T ss_pred             HHHHHHHhCccccCCCCCEEEECC
Confidence            999999987654  5689999987

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.90  E-value=1e-23  Score=186.10  Aligned_cols=209  Identities=16%  Similarity=0.138  Sum_probs=147.2

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------C
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+.++.++    +...+.++.+|++|++++.++++       +
T Consensus        24 ~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           24 KLTGRKALVTGATGGIGEAIARCFHAQ--GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            445789999999999999999999999  9999999998876554    34568899999999999888876       7


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHH----HHHHHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ----IDAAKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~l----l~aa~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|+||||||.....  .+.....++++       ..+++|+.++..+    ++.+++.+.++||++||..+.....    
T Consensus       102 iD~lvnnAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----  168 (266)
T 3grp_A          102 IDILVNNAGITRDG--LFVRMQDQDWD-------DVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP----  168 (266)
T ss_dssp             CCEEEECCCCC-------CCCHHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------
T ss_pred             CCEEEECCCCCCCC--CcccCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC----
Confidence            99999999975331  11111122223       3348899995554    4455566778999999987654332    


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-----hhhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-----IRELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                       ....|+.+|...+.+.+       ..|+++++++||++.++...     ....+...   .+  ...+.+++|+|++++
T Consensus       169 -~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~---~p--~~r~~~~edvA~~v~  242 (266)
T 3grp_A          169 -GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAM---IP--MKRMGIGEEIAFATV  242 (266)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTT---CT--TCSCBCHHHHHHHHH
T ss_pred             -CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhc---CC--CCCCcCHHHHHHHHH
Confidence             22579999998887665       35899999999999876321     11111110   11  134578999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.++.  ..|+++++.+
T Consensus       243 ~L~s~~~~~itG~~i~vdG  261 (266)
T 3grp_A          243 YLASDEAAYLTGQTLHING  261 (266)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCccccCccCCEEEECC
Confidence            9987654  4689999987

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.90  E-value=1.5e-23  Score=183.17  Aligned_cols=211  Identities=17%  Similarity=0.128  Sum_probs=152.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.++    +.....++++|++|++++.++++       ++
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAER--GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            45689999999999999999999999  9999999999766544    33447789999999999988886       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||.....  .+.....++++       ..+++|+.++.++++++.    +.+..+||++||..+..+..+    
T Consensus        85 D~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----  151 (248)
T 3op4_A           85 DILVNNAGITRDN--LLMRMKEEEWS-------DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG----  151 (248)
T ss_dssp             SEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----
T ss_pred             CEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC----
Confidence            9999999975431  11111222223       334889999888877764    456679999999876443322    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                       ...|+.+|...+.+.+       ..|+++++++||++.++.....  ..........+  ...+.+++|+|++++.++.
T Consensus       152 -~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p--~~r~~~p~dva~~v~~L~s  228 (248)
T 3op4_A          152 -QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVP--AGRLGDPREIASAVAFLAS  228 (248)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCT--TCSCBCHHHHHHHHHHHHS
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCC--CCCCcCHHHHHHHHHHHcC
Confidence             2569999998887665       3689999999999988753210  00000000011  1346799999999999887


Q ss_pred             Ccc--cCCceEEecc
Q 046297          296 FEE--AKFKAFDLAS  308 (331)
Q Consensus       296 ~~~--~~~~~~~i~~  308 (331)
                      .+.  ..|+++++.+
T Consensus       229 ~~~~~itG~~i~vdg  243 (248)
T 3op4_A          229 PEAAYITGETLHVNG  243 (248)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             CccCCccCcEEEECC
Confidence            653  4689999987

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.90  E-value=4e-24  Score=187.40  Aligned_cols=210  Identities=17%  Similarity=0.174  Sum_probs=148.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-Cchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+ +++.+.+       ..++.++.+|++|++++.++++     
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999  9999999998 6554332       2357889999999999998887     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC--C---CeEEEEccCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG--A---KQIVLVGSMGGT  215 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~--v---k~~v~~SS~~~~  215 (331)
                        ++|+||||||......+ +......++       ...+++|+.++.++++++.    +.+  .   ++||++||..+.
T Consensus        83 ~g~id~vi~~Ag~~~~~~~-~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  154 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKP-LPEIDDTFY-------DAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGH  154 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCC-GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHH
T ss_pred             cCCCCEEEECCCCcCCcCc-cccCCHHHH-------HHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhc
Confidence              89999999996221110 001111111       2234789999888777653    222  2   689999998764


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCH
Q 046297          216 NLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       216 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v  283 (331)
                      ....+    ....|+.+|...|.+.+       ..+++++++|||+++++....     ...+...   .+  ...++++
T Consensus       155 ~~~~~----~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---~~--~~~~~~~  225 (258)
T 3afn_B          155 TGGGP----GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNG---IP--MGRFGTA  225 (258)
T ss_dssp             HCCCT----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTT---CT--TCSCBCG
T ss_pred             cCCCC----CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhcc---CC--CCcCCCH
Confidence            31111    12579999999988765       248999999999999875321     0111110   11  1357899


Q ss_pred             HHHHHHHHHHhcCcc---cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE---AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~---~~~~~~~i~~  308 (331)
                      +|+|++++.++.++.   ..|+.|++.+
T Consensus       226 ~dva~~~~~l~~~~~~~~~~G~~~~v~g  253 (258)
T 3afn_B          226 EEMAPAFLFFASHLASGYITGQVLDING  253 (258)
T ss_dssp             GGTHHHHHHHHCHHHHTTCCSEEEEEST
T ss_pred             HHHHHHHHHHhCcchhccccCCEEeECC
Confidence            999999999997653   3588999987

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.90  E-value=3.4e-23  Score=180.17  Aligned_cols=202  Identities=16%  Similarity=0.117  Sum_probs=147.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-------eEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-------AARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-------~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      +++||||||+|+||++++++|+++  |+       +|++++|++++.+.+       ..++.++.+|++|++.+.++++ 
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHh--cCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence            467999999999999999999999  99       999999987655432       2347889999999999888876 


Q ss_pred             ------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCC
Q 046297          147 ------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~  216 (331)
                            ++|+||||||.....  .+......++       ...+++|+.++.++++++.    +.+.++||++||..++.
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  150 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFG--ALSDLTEEDF-------DYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK  150 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             HHHhCCCCCEEEEcCCcCCcC--ccccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC
Confidence                  699999999974321  0111111222       2334889999888887763    45778999999988754


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      +..+     ...|+.+|...+.+.+       ..+++++++|||+++++.....   ...      ....+++++|+|++
T Consensus       151 ~~~~-----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~------~~~~~~~~~dva~~  216 (244)
T 2bd0_A          151 AFRH-----SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV---DDE------MQALMMMPEDIAAP  216 (244)
T ss_dssp             CCTT-----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC---CST------TGGGSBCHHHHHHH
T ss_pred             CCCC-----CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc---ccc------ccccCCCHHHHHHH
Confidence            3322     2569999999987764       3689999999999998853211   000      02367899999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..++++....
T Consensus       217 ~~~l~~~~~~~~~g~~~~~~~  237 (244)
T 2bd0_A          217 VVQAYLQPSRTVVEEIILRPT  237 (244)
T ss_dssp             HHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHHHhCCccccchheEEecc
Confidence            999998764  3445555544

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.90  E-value=4.7e-23  Score=181.62  Aligned_cols=210  Identities=14%  Similarity=0.095  Sum_probs=149.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      ++.+++||||||+|+||+++++.|+++  |++|++++|++++    ..++.++++|++|++++.++++       ++|+|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSIHDPG----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSCCC----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEecCccc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            345788999999999999999999999  9999999998764    3458899999999999888876       69999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||.....  .+.....++++.       .+++|+.++.++++++.    +.+.++||++||..+.....+     ..
T Consensus        79 v~~Ag~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~  144 (264)
T 2dtx_A           79 VNNAGIESYG--KIESMSMGEWRR-------IIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN-----AS  144 (264)
T ss_dssp             EECCCCCCCB--CTTTSCHHHHHH-------HHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT-----BH
T ss_pred             EECCCCCCCC--CcccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC-----ch
Confidence            9999974321  111112222233       34889999877777764    346789999999876543322     25


Q ss_pred             hHHHHHHHHHHHHHh----cC--CCEEEEecCcccCCCcchh-hhhcc-CC-------cccc--CCcccccCHHHHHHHH
Q 046297          228 NILVWKRKAEQYLAD----SG--IPYTIIRAGGLQDKEGGIR-ELLVG-KD-------DELL--QTETRTIARADVAEVC  290 (331)
Q Consensus       228 ~y~~sK~~~e~~~~~----~~--~~~~ilrp~~v~g~~~~~~-~~~~~-~~-------~~~~--~~~~~~i~v~Dva~~~  290 (331)
                      .|+.+|..++.+.+.    .+  +++++|+||++.++..... ....+ ..       ..+.  .....+++++|+|+++
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  224 (264)
T 2dtx_A          145 AYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAV  224 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            799999999877652    22  8999999999987642110 00000 00       0000  0113478999999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++..+.  ..|+.+++.+
T Consensus       225 ~~l~s~~~~~~tG~~i~vdG  244 (264)
T 2dtx_A          225 AFLASREASFITGTCLYVDG  244 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhcCCCCcEEEECC
Confidence            99987653  4688999987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.90  E-value=4.9e-23  Score=183.13  Aligned_cols=215  Identities=15%  Similarity=0.108  Sum_probs=150.2

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh----c----CCCCcEEEccCCCcccHHHHhc--
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK----I----GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~----l----~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      .+++++++|||||+|+||++++++|+++  |++|++++|+. +..+.    +    ...+.++.+|++|++++.++++  
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKA--GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            3456789999999999999999999999  99999999943 33322    1    3357889999999999888876  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~  217 (331)
                           ++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+.++||++||..+...
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  169 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVE--KIEDFPVEQWD-------RIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA  169 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHCCCCCEEEECCCCCCCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC
Confidence                 789999999974321  11111222222       33488999988888876    5566779999999877543


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhh--cc--CC---cccc---CCcc
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELL--VG--KD---DELL---QTET  278 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~--~~--~~---~~~~---~~~~  278 (331)
                      ...     ...|+.+|..++.+.+       ..|+++++++||++.++.....  ...  .+  ..   ....   ....
T Consensus       170 ~~~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  244 (281)
T 3v2h_A          170 SPF-----KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTK  244 (281)
T ss_dssp             CTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTC
T ss_pred             CCC-----chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCC
Confidence            322     2579999999887765       3589999999999998753210  000  00  00   0000   1124


Q ss_pred             cccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          279 RTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .+.+++|+|++++.++.++.  ..|+++++.+
T Consensus       245 r~~~~edvA~~v~~L~s~~a~~itG~~i~vdG  276 (281)
T 3v2h_A          245 KFITVEQVASLALYLAGDDAAQITGTHVSMDG  276 (281)
T ss_dssp             SCBCHHHHHHHHHHHHSSGGGGCCSCEEEEST
T ss_pred             CccCHHHHHHHHHHHcCCCcCCCCCcEEEECC
Confidence            57899999999999997654  4689999987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.90  E-value=2.9e-23  Score=181.05  Aligned_cols=208  Identities=15%  Similarity=0.109  Sum_probs=151.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++.+|++|++++.++++      
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            34688999999999999999999999  99999999997665432       3357899999999999888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||......  +.....+++       ...+++|+.++.++++++.    +.+..+||++||..+...... 
T Consensus        81 ~~id~li~~Ag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  150 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNL--MMRMSEDEW-------QSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG-  150 (247)
T ss_dssp             CCCSEEEECCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-
T ss_pred             CCCCEEEECCCCCCCCc--hhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC-
Confidence             5899999999753210  111111222       2334889999888877754    456679999999876443322 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                          ...|+.+|...+.+.+       ..++++++++||++.++....     .......   .  ....+.+++|+|++
T Consensus       151 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---~--~~~~~~~~~dva~~  221 (247)
T 3lyl_A          151 ----QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATK---I--PSGQIGEPKDIAAA  221 (247)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTT---S--TTCCCBCHHHHHHH
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhc---C--CCCCCcCHHHHHHH
Confidence                2569999998877665       368999999999998875321     1111110   1  12346899999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.++.  ..|++|++.+
T Consensus       222 i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          222 VAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCCCcCCccCCEEEECC
Confidence            999987654  4689999987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=2.2e-23  Score=181.78  Aligned_cols=212  Identities=12%  Similarity=0.029  Sum_probs=151.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCcccHHHHh---cCCCEEEEc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNSIIPAI---QGIDALIIL  154 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~~~~~l---~~~d~Vi~~  154 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++.  .++.++++|++|++++.+++   .++|+||||
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            45688999999999999999999999  999999999977665543  24678999999999888765   478999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      ||......  +.....+++       ...+++|+.++.++++++.    +.+.++||++||..+.....    .....|.
T Consensus        82 Ag~~~~~~--~~~~~~~~~-------~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~~~Y~  148 (246)
T 2ag5_A           82 AGFVHHGT--VLDCEEKDW-------DFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV----VNRCVYS  148 (246)
T ss_dssp             CCCCCCBC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----TTBHHHH
T ss_pred             CccCCCCC--cccCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC----CCCccHH
Confidence            99743210  001111122       2234789999888877764    45778999999987654332    1225799


Q ss_pred             HHHHHHHHHHHh-------cCCCEEEEecCcccCCCcch-h-------hhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          231 VWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGI-R-------ELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       231 ~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~-~-------~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                      .+|...+.+.+.       .+++++++|||+++++.... .       ..........+  ...+.+++|+|++++.++.
T Consensus       149 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dvA~~v~~l~s  226 (246)
T 2ag5_A          149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK--TGRFATAEEIAMLCVYLAS  226 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT--TSSCEEHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC--CCCCCCHHHHHHHHHHHhC
Confidence            999999877652       48999999999999874221 0       00000000011  1236799999999999987


Q ss_pred             Ccc--cCCceEEecc
Q 046297          296 FEE--AKFKAFDLAS  308 (331)
Q Consensus       296 ~~~--~~~~~~~i~~  308 (331)
                      .+.  ..|+.+++.+
T Consensus       227 ~~~~~~tG~~i~vdg  241 (246)
T 2ag5_A          227 DESAYVTGNPVIIDG  241 (246)
T ss_dssp             GGGTTCCSCEEEECT
T ss_pred             ccccCCCCCEEEECC
Confidence            653  4688999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.90  E-value=4.2e-23  Score=182.42  Aligned_cols=211  Identities=14%  Similarity=0.044  Sum_probs=151.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+. +..+.       ....+.++.+|++|++++.++++    
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAA--GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            445789999999999999999999999  99999999843 33222       13457889999999999888876    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+..+||++||..+.....
T Consensus       103 ~~g~id~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  173 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDT--LLLRMKRDDWQ-------SVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP  173 (269)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT
T ss_pred             HcCCCCEEEECCCCCCCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC
Confidence               799999999975431  11111222223       33488999988887775    455677999999987644332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      .     ...|+.+|..++.+.+       ..|+++++++||++.++....... .......+  ...+.+++|+|++++.
T Consensus       174 ~-----~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~p--~~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          174 G-----QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-EKLLEVIP--LGRYGEAAEVAGVVRF  245 (269)
T ss_dssp             T-----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-HHHGGGCT--TSSCBCHHHHHHHHHH
T ss_pred             C-----chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-HHHHhcCC--CCCCCCHHHHHHHHHH
Confidence            2     2569999998887655       368999999999999886432111 00001111  1346789999999999


Q ss_pred             HhcCcc---cCCceEEecc
Q 046297          293 ALQFEE---AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~---~~~~~~~i~~  308 (331)
                      ++.++.   ..|+++++.+
T Consensus       246 l~s~~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDG  264 (269)
T ss_dssp             HHHCGGGGGCCSCEEEEST
T ss_pred             HhCCcccCCCcCCEEEECC
Confidence            998743   4589999987

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.90  E-value=3.9e-23  Score=181.60  Aligned_cols=211  Identities=12%  Similarity=0.049  Sum_probs=148.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++| ++++.+.+       ..++.++.+|++|++++.++++     
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            44688999999999999999999999  999999999 65443322       2347789999999999888876     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~~~  219 (331)
                        ++|+||||||......  +......++       ...+++|+.++.++++++.    +.+ .++||++||..+..+..
T Consensus        83 ~g~id~li~~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  153 (261)
T 1gee_A           83 FGKLDVMINNAGLENPVS--SHEMSLSDW-------NKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP  153 (261)
T ss_dssp             HSCCCEEEECCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT
T ss_pred             cCCCCEEEECCCCCCCCC--cccCCHHHH-------HHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC
Confidence              7999999999643210  001111122       2334889888877776654    445 67999999987654332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      +     ...|+.+|...+.+.+       ..+++++++|||+++++.....    ..........+  ...+++++|+|+
T Consensus       154 ~-----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~  226 (261)
T 1gee_A          154 L-----FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP--MGYIGEPEEIAA  226 (261)
T ss_dssp             T-----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT--TSSCBCHHHHHH
T ss_pred             C-----ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC--CCCCcCHHHHHH
Confidence            2     2579999988887654       2589999999999998753211    00000000011  134689999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.++.  ..|+.+++.+
T Consensus       227 ~~~~l~~~~~~~~~G~~~~v~g  248 (261)
T 1gee_A          227 VAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCccccCCCCcEEEEcC
Confidence            9999987543  4688999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.90  E-value=1.1e-22  Score=180.67  Aligned_cols=215  Identities=15%  Similarity=0.097  Sum_probs=152.5

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-------------Cchhhh-------cCCCCcEEEccCCC
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-------------EESKQK-------IGGADDLFIGDIRD  137 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-------------~~~~~~-------l~~~~~~v~~Dl~d  137 (331)
                      .+..++++|||||+|+||++++++|+++  |++|++++|+             +++.++       ...++.++++|++|
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            3456789999999999999999999999  9999999983             332222       12357889999999


Q ss_pred             cccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC-CCe
Q 046297          138 SNSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG-AKQ  205 (331)
Q Consensus       138 ~~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-vk~  205 (331)
                      ++++.++++       ++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+ ..+
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~~g~  159 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWG--RVWELTDEQWD-------TVIGVNLTGTWRTLRATVPAMIEAGNGGS  159 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCB--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHCSCEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHH-------HHHhhhhHHHHHHHHHHHHHHHhcCCCCE
Confidence            999888875       799999999975421  11111122222       33488999988888776    3444 568


Q ss_pred             EEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---hhhccCC---c-
Q 046297          206 IVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---ELLVGKD---D-  271 (331)
Q Consensus       206 ~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~---~-  271 (331)
                      ||++||..+......     ...|+.+|...+.+.+       ..|+++++|+||++.++.....   .......   . 
T Consensus       160 iv~isS~~~~~~~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  234 (280)
T 3pgx_A          160 IVVVSSSAGLKATPG-----NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHS  234 (280)
T ss_dssp             EEEECCGGGTSCCTT-----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGG
T ss_pred             EEEEcchhhccCCCC-----chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhh
Confidence            999999877544322     2579999999887665       3689999999999999864321   1110000   0 


Q ss_pred             --cccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          272 --ELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       272 --~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                        ........+.+++|+|++++.++.++.  ..|+++++.+
T Consensus       235 ~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  275 (280)
T 3pgx_A          235 FPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDK  275 (280)
T ss_dssp             SCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEEST
T ss_pred             hhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence              111112347899999999999987654  4689999987

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.90  E-value=8.1e-23  Score=180.98  Aligned_cols=211  Identities=11%  Similarity=0.003  Sum_probs=148.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHh-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAI-------  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l-------  145 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++.+|++|++++.+++       
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34688999999999999999999999  99999999997654432       235788999999999888877       


Q ss_pred             -cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          146 -QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       146 -~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                       .++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+.++||++||..++....+
T Consensus        97 ~g~id~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  167 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHK--EAKDFTEKDYN-------IIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS  167 (273)
T ss_dssp             TSCCCEEEECCCCCCCC--CTTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT
T ss_pred             CCCCcEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC
Confidence             4699999999974321  11111112222       23478999988888776    4556789999999987543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h-------hhccCCccccCCcccccCHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E-------LLVGKDDELLQTETRTIARAD  285 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~-------~~~~~~~~~~~~~~~~i~v~D  285 (331)
                           ...|..+|...+.+.+       ..++++++|+||++.++..... .       .........+  ...+.+++|
T Consensus       168 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~d  240 (273)
T 1ae1_A          168 -----VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP--MGRAGKPQE  240 (273)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST--TCSCBCHHH
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC--CCCCcCHHH
Confidence                 2579999999887765       2589999999999998753210 0       0000000011  123679999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|++++.++..+.  ..|+++++.+
T Consensus       241 vA~~v~~l~s~~~~~~tG~~i~vdG  265 (273)
T 1ae1_A          241 VSALIAFLCFPAASYITGQIIWADG  265 (273)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCccccCcCCCEEEECC
Confidence            9999999987543  4688999987

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.90  E-value=5.3e-23  Score=180.85  Aligned_cols=212  Identities=13%  Similarity=0.046  Sum_probs=148.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhc--------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKI--------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l--------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|++++ .+.+        ..++.++.+|++|++++.++++     
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999  9999999998766 4432        3357788999999999888875     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+.++||++||..+.....+
T Consensus        81 ~g~iD~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  151 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTA--LIEDFPTEKWD-------AILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN  151 (260)
T ss_dssp             HSCCSEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC
Confidence              799999999964321  01111112222       33488999887777766    4456789999999876543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h-hhc-------cCCccc-c--CCccccc
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E-LLV-------GKDDEL-L--QTETRTI  281 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~-~~~-------~~~~~~-~--~~~~~~i  281 (331)
                           ...|..+|...+.+.+       ..++++++++||++.++..... . ...       .....+ .  .....+.
T Consensus       152 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  226 (260)
T 1x1t_A          152 -----KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFV  226 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCB
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCc
Confidence                 2579999999887765       2589999999999988753211 0 000       000000 0  0113468


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++|+|++++.++..+.  ..|+++++.+
T Consensus       227 ~p~dva~~~~~l~s~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          227 TPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            99999999999987643  4688999987

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.90  E-value=3.1e-23  Score=184.09  Aligned_cols=215  Identities=13%  Similarity=0.070  Sum_probs=151.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++.+++||||||+|+||++++++|+++  |++|++++|++++.+.+       ..++.++.+|++|++++.++++     
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999  99999999987654332       3457889999999999888876     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||......+ +.      .+...++....+++|+.+    ++.+++.+++.+.++||++||..+..... 
T Consensus       109 ~g~id~li~~Ag~~~~~~~-~~------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-  180 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGP-EI------DVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI-  180 (279)
T ss_dssp             HSCCSEEEECGGGSTTC---CC------CSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---
T ss_pred             hCCCCEEEECCcccccCCc-cc------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC-
Confidence              49999999997432110 00      011111122334788888    56778888888889999999987654311 


Q ss_pred             CCCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                        ......|+.+|...|.+.+.       .+ ++++++||++.++....  ...........+  ...+++++|+|++++
T Consensus       181 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p--~~~~~~~~dvA~~~~  255 (279)
T 3ctm_A          181 --PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTP--LGREGLTQELVGGYL  255 (279)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHST--TCSCBCGGGTHHHHH
T ss_pred             --CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCC--ccCCcCHHHHHHHHH
Confidence              11225799999999987762       46 89999999998875321  000000000011  124689999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++..+.  ..|+++++.+
T Consensus       256 ~l~s~~~~~~tG~~i~vdg  274 (279)
T 3ctm_A          256 YLASNASTFTTGSDVVIDG  274 (279)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCccccCccCCEEEECC
Confidence            9997653  5688999987

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.90  E-value=8.8e-23  Score=178.73  Aligned_cols=206  Identities=14%  Similarity=0.110  Sum_probs=147.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi~  153 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|++++.++    +.++++|++|++++.++++       ++|+|||
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~----~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADA--GDKVAITYRSGEPPEG----FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTT----SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHhhcc----ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999999999999999999999  9999999998765432    7889999999999888775       4799999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      |||.....  .+.....++++..+       ++|+.++.++++++.    +.+.++||++||..+.....     ....|
T Consensus        94 nAg~~~~~--~~~~~~~~~~~~~~-------~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----~~~~Y  159 (253)
T 2nm0_A           94 NAGVTKDQ--LLMRMSEEDFTSVV-------ETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA-----GQANY  159 (253)
T ss_dssp             ECSCCTTT--C---CCTTTTHHHH-------HHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH-----HHHHH
T ss_pred             CCCCCCCC--ChhhCCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC-----CcHHH
Confidence            99975321  12223334444544       889999888877654    45778999999987643221     12569


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccc-cC-CcccccCHHHHHHHHHHHhcCcc--
Q 046297          230 LVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDEL-LQ-TETRTIARADVAEVCIQALQFEE--  298 (331)
Q Consensus       230 ~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~-~~-~~~~~i~v~Dva~~~~~~l~~~~--  298 (331)
                      ..+|...+.+.+       ..++++++++||++.++.....  .......+ .. ....+++++|+|++++.++.++.  
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~  237 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL--TDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASY  237 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            999999887765       2589999999999987643210  00000000 00 01246899999999999997653  


Q ss_pred             cCCceEEecc
Q 046297          299 AKFKAFDLAS  308 (331)
Q Consensus       299 ~~~~~~~i~~  308 (331)
                      ..|+.+.+.+
T Consensus       238 ~tG~~i~vdG  247 (253)
T 2nm0_A          238 ITGAVIPVDG  247 (253)
T ss_dssp             CCSCEEEEST
T ss_pred             CcCcEEEECC
Confidence            4688999987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=2.2e-23  Score=185.19  Aligned_cols=204  Identities=19%  Similarity=0.190  Sum_probs=143.4

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---------CCCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---------GADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---------~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ++.+++||||||+|+||+++++.|+++  |++|++++|++++.+.+.         ..+.++.+|++|++++.++++   
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999  999999999876544321         236788999999999888776   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH----HHHHHHHHHHcCC--CeEEEEccCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG----QKNQIDAAKAAGA--KQIVLVGSMGGTN  216 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~v--k~~v~~SS~~~~~  216 (331)
                          ++|+||||||.....  .+......++       ...+++|+.+    ++.+++.+++.+.  ++||++||..+..
T Consensus       107 ~~~g~iD~vi~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  177 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARPD--TLLSGSTSGW-------KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR  177 (279)
T ss_dssp             HHHCCCSEEEECCCCCCCC--CTTTCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred             HhCCCCCEEEECCCCCCCC--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcc
Confidence                799999999974321  1111111122       2334888888    7778888888876  7999999987652


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchhhhhccCCcccc--CCcccccCHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL--QTETRTIARAD  285 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~i~v~D  285 (331)
                      . .+..  ....|+.+|...+.+.+         ..++++++|+||++.++...  ...........  .....+++++|
T Consensus       178 ~-~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~d  252 (279)
T 1xg5_A          178 V-LPLS--VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF--KLHDKDPEKAAATYEQMKCLKPED  252 (279)
T ss_dssp             C-CSCG--GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH--HHTTTCHHHHHHHHC---CBCHHH
T ss_pred             c-CCCC--CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh--hhcccChhHHhhhcccccCCCHHH
Confidence            1 1111  22569999999876654         35799999999999876421  11111100000  11234689999


Q ss_pred             HHHHHHHHhcCcc
Q 046297          286 VAEVCIQALQFEE  298 (331)
Q Consensus       286 va~~~~~~l~~~~  298 (331)
                      +|++++.++..+.
T Consensus       253 vA~~i~~l~~~~~  265 (279)
T 1xg5_A          253 VAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHHSCT
T ss_pred             HHHHHHHHhcCCc
Confidence            9999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.90  E-value=3.5e-23  Score=184.51  Aligned_cols=211  Identities=17%  Similarity=0.121  Sum_probs=147.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++||||||+|+||+++++.|+++  |++|+++.|++++.+.+       ..++.++.+|++|++++.++++      
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            44688999999999999999999999  99999999887654432       2357889999999999988874      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||.....  .+......++       ...+++|+.++.++++++    ++.+.++||++||..+.....  
T Consensus       120 ~~id~li~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--  188 (285)
T 2c07_A          120 KNVDILVNNAGITRDN--LFLRMKNDEW-------EDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV--  188 (285)
T ss_dssp             SCCCEEEECCCCCCCC--CTTTCCHHHH-------HHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT--
T ss_pred             CCCCEEEECCCCCCCC--chhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC--
Confidence             689999999975321  1111111222       233488998866666555    456778999999986543322  


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-h-hhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-R-ELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                         ....|+.+|..++.+.+       ..++++++++||++.++.... . ..........+  ...+++++|+|++++.
T Consensus       189 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          189 ---GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIP--AGRMGTPEEVANLACF  263 (285)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCT--TSSCBCHHHHHHHHHH
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCC--CCCCCCHHHHHHHHHH
Confidence               12569999999887665       258999999999998875321 0 00000000111  1237899999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.  ..|+.|++.+
T Consensus       264 l~~~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDG  281 (285)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCCCcCCCCCCEEEeCC
Confidence            997653  4688999987

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.90  E-value=3.3e-23  Score=182.84  Aligned_cols=214  Identities=18%  Similarity=0.100  Sum_probs=152.1

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+.+....    ...+.+|++|.+.+.++++       ++|+|
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~----~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAA--GARVAVADRAVAGIAA----DLHLPGDLREAAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECSSCCTTSCC----SEECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHh----hhccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            455789999999999999999999999  9999999998765433    2445899999988877664       79999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||......  +.....++++       ..+++|+.++.++++++    ++.+.++||++||..+..+..+     ..
T Consensus        99 vnnAg~~~~~~--~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----~~  164 (266)
T 3uxy_A           99 VNNAGVISRGR--ITETTDADWS-------LSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG-----HA  164 (266)
T ss_dssp             EECCCCCCCBC--GGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT-----BH
T ss_pred             EECCCCCCCCC--hhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC-----Ch
Confidence            99999754311  1111122222       33478999988888877    5667789999999887544332     25


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC-----cccc--CCcccccCHHHHHHHHHHH
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD-----DELL--QTETRTIARADVAEVCIQA  293 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-----~~~~--~~~~~~i~v~Dva~~~~~~  293 (331)
                      .|+.+|..++.+.+       ..|+++++++||++.++.........+..     ..+.  .....+.+++|+|++++.+
T Consensus       165 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  244 (266)
T 3uxy_A          165 LYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFL  244 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            69999999887765       35899999999999886422100000000     0000  0113467999999999999


Q ss_pred             hcCcc--cCCceEEeccCCCCCCC
Q 046297          294 LQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +.++.  ..|+++++.+   |..+
T Consensus       245 ~s~~~~~itG~~i~vdG---G~~~  265 (266)
T 3uxy_A          245 ASDAARYLCGSLVEVNG---GKAV  265 (266)
T ss_dssp             HSGGGTTCCSCEEEEST---TCCC
T ss_pred             hCchhcCCcCCEEEECc---CEeC
Confidence            98754  4589999998   6544

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.90  E-value=1.8e-22  Score=179.74  Aligned_cols=217  Identities=18%  Similarity=0.144  Sum_probs=153.0

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|++++|+.++.+++       ...+.++++|++|++++.++++     
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345688999999999999999999999  99999999997665432       2357889999999998888876     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||...... .+.....++++.       .+++|+.++..+++++    ++.+.++||++||..+..... 
T Consensus       103 ~g~iD~lVnnAg~~~~~~-~~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-  173 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWA-PIDDLKPFEWDE-------TIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFT-  173 (283)
T ss_dssp             HSCCCEEEECCCCCCCBC-CTTTSCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC-
T ss_pred             hCCCCEEEECCCCCCCCC-chhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCC-
Confidence              7999999999753311 111222222233       3489999988888876    566778999999987644211 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCcc-----ccCCcccccCHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDE-----LLQTETRTIARA  284 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~-----~~~~~~~~i~v~  284 (331)
                      .  .....|+.+|...+.+.+       ..|+++++|+||++.++.....    .........     .+-....+.+++
T Consensus       174 ~--~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pe  251 (283)
T 3v8b_A          174 T--PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSE  251 (283)
T ss_dssp             S--TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHH
T ss_pred             C--CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHH
Confidence            1  122579999999987765       2579999999999988753211    000000011     111012356899


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEecc
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |+|++++.++.+..  ..|+++++.+
T Consensus       252 dvA~~v~fL~s~~a~~itG~~i~vdG  277 (283)
T 3v8b_A          252 DVAELIRFLVSERARHVTGSPVWIDG  277 (283)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHcCccccCCcCCEEEECc
Confidence            99999999987654  4688999987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.90  E-value=1.2e-23  Score=183.01  Aligned_cols=209  Identities=16%  Similarity=0.107  Sum_probs=146.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++||||||+|+||++++++|+++  |++|+++ .|++++.+.+       ..++.++.+|++|++++.++++       
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            367999999999999999999999  9999995 7876544332       2347889999999999988886       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||.....  .+......++       ...+++|+.++.++++++.+    .+.++||++||..+..+..+  
T Consensus        79 ~id~li~~Ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  147 (244)
T 1edo_A           79 TIDVVVNNAGITRDT--LLIRMKKSQW-------DEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG--  147 (244)
T ss_dssp             CCSEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--
T ss_pred             CCCEEEECCCCCCCc--CcccCCHHHH-------HHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC--
Confidence            699999999974321  0001111122       23348899998888777654    47789999999865433221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                         ...|..+|...+.+.+       ..+++++++|||+++++....  ...........+  ...+++++|+|++++.+
T Consensus       148 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~l  222 (244)
T 1edo_A          148 ---QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIP--LGRTGQPENVAGLVEFL  222 (244)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCT--TCSCBCHHHHHHHHHHH
T ss_pred             ---CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCC--CCCCCCHHHHHHHHHHH
Confidence               2569999998886654       258999999999998864211  000000000011  12468999999999999


Q ss_pred             hcCcc---cCCceEEecc
Q 046297          294 LQFEE---AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~---~~~~~~~i~~  308 (331)
                      +..+.   ..|+.|++.+
T Consensus       223 ~~~~~~~~~~G~~~~v~g  240 (244)
T 1edo_A          223 ALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHCSGGGGCCSCEEEEST
T ss_pred             hCCCccCCcCCCEEEeCC
Confidence            84432   3588999987

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.90  E-value=6.8e-23  Score=181.87  Aligned_cols=216  Identities=12%  Similarity=0.066  Sum_probs=155.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|++++.++    +...+.++++|++|++++.++++       ++
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999  9999999999766544    34568899999999999888876       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||.....  .+.....++++       ..+++|+.++..+++++.    +.+..+||++||..+..+..+    
T Consensus       103 D~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  169 (277)
T 4dqx_A          103 DVLVNNAGFGTTG--NVVTIPEETWD-------RIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD----  169 (277)
T ss_dssp             CEEEECCCCCCCB--CTTTSCHHHHH-------HHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT----
T ss_pred             CEEEECCCcCCCC--CcccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC----
Confidence            9999999974331  11111122222       234789999887777764    445669999999887544322    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC--cc----cc--CCcccccCHHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD--DE----LL--QTETRTIARADVAEV  289 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~--~~----~~--~~~~~~i~v~Dva~~  289 (331)
                       ...|+.+|...+.+.+       ..|+++++++||++.++...  .......  ..    +.  .....+.+++|+|++
T Consensus       170 -~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~  246 (277)
T 4dqx_A          170 -RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT--KIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEA  246 (277)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--HHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHH
T ss_pred             -ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhh--hhcccccchhHHHHHHHhcCcccCCcCHHHHHHH
Confidence             2579999999887765       35899999999999876411  1110000  00    00  011345789999999


Q ss_pred             HHHHhcCcc--cCCceEEeccCCCCCCCC
Q 046297          290 CIQALQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      ++.++.++.  ..|+++++.+   |...+
T Consensus       247 v~~L~s~~~~~itG~~i~vdG---G~~~~  272 (277)
T 4dqx_A          247 MLFLASDRSRFATGSILTVDG---GSSIG  272 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESS---SSSSC
T ss_pred             HHHHhCCccCCCcCCEEEECC---chhhh
Confidence            999987654  4689999998   65443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.89  E-value=4.8e-23  Score=181.76  Aligned_cols=202  Identities=18%  Similarity=0.129  Sum_probs=145.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|+.++.+.+.. .+.++.+|++|++++.++++       ++|+||
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEE--GHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4678999999999999999999999  9999999999887766543 57889999999999888876       789999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||||.....  .+.....++++.       .+++|+.++.++++++    ++.+.++||++||..+.....+     ...
T Consensus        93 nnAg~~~~~--~~~~~~~~~~~~-------~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~-----~~~  158 (266)
T 3p19_A           93 NNAGMMLLG--QIDTQEANEWQR-------MFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD-----HAA  158 (266)
T ss_dssp             ECCCCCCCC--CTTTSCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-----CHH
T ss_pred             ECCCcCCCC--CcccCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC-----Cch
Confidence            999975431  111222222222       3488999988865554    5667789999999887544322     256


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      |+.+|...+.+.+       ..|+++++|+||++.++.....  ................+.+++|+|++++.++.++.
T Consensus       159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCC
Confidence            9999999887665       3689999999999988753210  00000000000001236899999999999998875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=9e-23  Score=177.72  Aligned_cols=203  Identities=13%  Similarity=0.063  Sum_probs=141.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc--------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ--------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~--------  146 (331)
                      .+++||||||+|+||++++++|+++  |  ++|++++|++++.+.+    ..++.++.+|++|++.+.++++        
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~--g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhc--CCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            4678999999999999999999999  9  9999999997765543    2357899999999999888886        


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----c------C-----CCeEEEEc
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----A------G-----AKQIVLVG  210 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~------~-----vk~~v~~S  210 (331)
                       ++|+||||||...... .+......++       ...+++|+.++.++++++..    .      +     .++||++|
T Consensus        80 ~~id~li~~Ag~~~~~~-~~~~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  151 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYG-TNTEPNRAVI-------AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             GCCCEEEECCCCCCCBC-TTSCCCHHHH-------HHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             CCCcEEEECCcccCCCc-ccccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEec
Confidence             8999999999754111 1111111222       23348899998888777643    2      5     68999999


Q ss_pred             cCCCCCCCCCC--CCCCcchHHHHHHHHHHHHH----h---cCCCEEEEecCcccCCCcchhhhhccCCccccCCccccc
Q 046297          211 SMGGTNLNHPL--NSLGNGNILVWKRKAEQYLA----D---SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTI  281 (331)
Q Consensus       211 S~~~~~~~~~~--~~~~~~~y~~sK~~~e~~~~----~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i  281 (331)
                      |..+.....+.  ...+...|+.+|...+.+.+    +   .++++++++||++.++....               ..++
T Consensus       152 S~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------~~~~  216 (250)
T 1yo6_A          152 SGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK---------------NAAL  216 (250)
T ss_dssp             CGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------
T ss_pred             cCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC---------------CCCC
Confidence            98764433211  00223679999999987765    2   48999999999998764311               2368


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++|+|+.++.++..+.  ..|+.+.+.+
T Consensus       217 ~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          217 TVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             --HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             CHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence            99999999999998764  3566555543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.89  E-value=3.1e-23  Score=183.39  Aligned_cols=212  Identities=16%  Similarity=0.097  Sum_probs=153.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++.+|++|++++.++++      
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARR--GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            45688999999999999999999999  99999999987655432       3357899999999999888876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||......  +.....++++.       .+++|+.++.++++++.    +.+-.+||++||..+.....+ 
T Consensus       104 g~iD~lvnnAg~~~~~~--~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  173 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQL--AMRMKDDEWDA-------VIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG-  173 (270)
T ss_dssp             SCCCEEEECCCCCCCBC--TTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-
T ss_pred             CCCCEEEECCCCCCCCC--cccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC-
Confidence             7999999999754321  11122222333       34899999888888764    445678999999876443322 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                          ...|+.+|..++.+.+       ..|+++++++||++.++....     ...+..   ..+  ...+.+++|+|++
T Consensus       174 ----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~---~~p--~~r~~~pedvA~~  244 (270)
T 3ftp_A          174 ----QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKT---QIP--LGRLGSPEDIAHA  244 (270)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHT---TCT--TCSCBCHHHHHHH
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHh---cCC--CCCCCCHHHHHHH
Confidence                2569999998887665       368999999999998763211     011100   011  1346799999999


Q ss_pred             HHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          290 CIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      ++.++..+.  ..|+++++.+   |...
T Consensus       245 v~~L~s~~~~~itG~~i~vdG---G~~~  269 (270)
T 3ftp_A          245 VAFLASPQAGYITGTTLHVNG---GMFM  269 (270)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST---TSSC
T ss_pred             HHHHhCCCcCCccCcEEEECC---Cccc
Confidence            999986543  4689999997   6543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.89  E-value=1.1e-22  Score=178.61  Aligned_cols=211  Identities=15%  Similarity=0.054  Sum_probs=149.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ++++|||||+|+||++++++|+++  |++|++++|++++  .+++       ..++.++.+|++|++++.++++      
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            478999999999999999999999  9999999998765  3321       2357889999999999888876      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCC-CeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGA-KQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v-k~~v~~SS~~~~~~~~~  220 (331)
                       ++|+||||||.....  .+.....+++       ...+++|+.++.++++++..    .+. ++||++||..+.....+
T Consensus        80 g~iD~lv~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  150 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIK--PLLEVTEEDL-------KQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI  150 (258)
T ss_dssp             TCCCEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC
Confidence             799999999974321  0111111222       23348899998887777654    466 89999999876543222


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-h-hhh--ccC--Cc---ccc-C-CcccccC
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-R-ELL--VGK--DD---ELL-Q-TETRTIA  282 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~-~~~--~~~--~~---~~~-~-~~~~~i~  282 (331)
                           ...|..+|...+.+.+       ..++++++++||++.++.... . ...  .+.  ..   .+. . ....+.+
T Consensus       151 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  225 (258)
T 3a28_C          151 -----LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSV  225 (258)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBC
T ss_pred             -----chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccC
Confidence                 2569999999887665       358999999999997764211 0 000  001  00   000 0 0123689


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++|+|++++.++.++.  ..|+.+++.+
T Consensus       226 p~dvA~~v~~l~s~~~~~~tG~~i~vdG  253 (258)
T 3a28_C          226 PEDVAGLVSFLASENSNYVTGQVMLVDG  253 (258)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence            9999999999997653  4688999987

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.89  E-value=2e-23  Score=183.69  Aligned_cols=216  Identities=15%  Similarity=0.139  Sum_probs=150.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c----CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I----GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l----~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+.++...    +    ..++.++.+|++|++++.++++     
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999  9999999997544321    1    3457889999999998888775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C-CCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G-AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-vk~~v~~SS~~~~~~~~  219 (331)
                        ++|+||||||......  +.....+++       ...+++|+.++.++++++...    + .++||++||..+.....
T Consensus        90 ~~~id~li~~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  160 (265)
T 1h5q_A           90 LGPISGLIANAGVSVVKP--ATELTHEDF-------AFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ  160 (265)
T ss_dssp             SCSEEEEEECCCCCCCSC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE
T ss_pred             cCCCCEEEECCCcCCCCc--hhhCCHHHH-------HHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccc
Confidence              4899999999743210  001111112       233488999998888877532    3 47999999986643321


Q ss_pred             C--CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHH
Q 046297          220 P--LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~--~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      +  ....+...|+.+|...+.+.+       ..+++++++|||+++++.....  ..........+  ...+++++|+|+
T Consensus       161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~  238 (265)
T 1h5q_A          161 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIP--LNRFAQPEEMTG  238 (265)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCT--TSSCBCGGGGHH
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCc--ccCCCCHHHHHH
Confidence            1  111123679999999987765       2589999999999998753210  00000000011  124689999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.++.  ..|+.|++.+
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~g  260 (265)
T 1h5q_A          239 QAILLLSDHATYMTGGEYFIDG  260 (265)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECT
T ss_pred             HHHhhccCchhcCcCcEEEecC
Confidence            9999997653  4688999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=7.1e-23  Score=180.80  Aligned_cols=212  Identities=15%  Similarity=0.078  Sum_probs=150.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|++++.+.+        ..++.++.+|++|++++.++++    
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345688999999999999999999999  99999999987654321        3457789999999998888776    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCC-CCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMG-GTNLN  218 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~-~~~~~  218 (331)
                         ++|+||||||.....  .+.....+++       ...+++|+.++.++++++    ++.+.++||++||.. +..+.
T Consensus        96 ~~g~iD~lvnnAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  166 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINRRH--PAEEFPLDEF-------RQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM  166 (267)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS
T ss_pred             HcCCCCEEEECCCcCCCC--ChhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC
Confidence               799999999974321  0101111112       233478999988887766    345678999999987 53322


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      .     ....|..+|..++.+.+       ..|+++++|+||++.++.....    ..........+  ...+.+++|+|
T Consensus       167 ~-----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~~~~~p~dvA  239 (267)
T 1vl8_A          167 P-----NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIP--LGRTGVPEDLK  239 (267)
T ss_dssp             S-----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCT--TSSCBCGGGGH
T ss_pred             C-----CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCC--CCCCcCHHHHH
Confidence            1     12579999999987765       2589999999999988753211    00000000011  12368999999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++.++..+.  ..|+.+.+.+
T Consensus       240 ~~v~~l~s~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          240 GVAVFLASEEAKYVTGQIIFVDG  262 (267)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHcCccccCCcCCeEEECC
Confidence            99999987653  4688898887

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=1e-22  Score=177.92  Aligned_cols=209  Identities=15%  Similarity=0.085  Sum_probs=144.8

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh---cCCCEEEEc
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI---QGIDALIIL  154 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l---~~~d~Vi~~  154 (331)
                      ....+++||||||+|+||++++++|+++  |++|++++|+++..+++. .+.++ +|+  .+++.+++   .++|+||||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~-~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKRSG-HRYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHTC-SEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHhhC-CeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            4455789999999999999999999999  999999999976555553 45666 999  44455554   489999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      ||......  +.....+++       ...+++|+.++..    +++.+++.+.++||++||..++.+..+     ...|.
T Consensus        89 Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~~Y~  154 (249)
T 1o5i_A           89 AGGPKAGF--FDELTNEDF-------KEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN-----LYTSN  154 (249)
T ss_dssp             CCCCCCBC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----BHHHH
T ss_pred             CCCCCCCC--hhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC-----CchHH
Confidence            99643210  111111112       2334788887554    456666778889999999987654322     25699


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhc-cCCccccCCcccccCHHHHHHHHHHHhcCcc--
Q 046297          231 VWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLV-GKDDELLQTETRTIARADVAEVCIQALQFEE--  298 (331)
Q Consensus       231 ~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--  298 (331)
                      .+|...+.+.+       ..++++++++||++.++.....  .... ......+  ...+.+++|+|++++.++..+.  
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p--~~~~~~~~dvA~~i~~l~s~~~~~  232 (249)
T 1o5i_A          155 SARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIP--MRRMAKPEEIASVVAFLCSEKASY  232 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTST--TSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCC--CCCCcCHHHHHHHHHHHcCccccC
Confidence            99999887665       3689999999999998863210  0000 0000011  1346899999999999987653  


Q ss_pred             cCCceEEecc
Q 046297          299 AKFKAFDLAS  308 (331)
Q Consensus       299 ~~~~~~~i~~  308 (331)
                      ..|+.|++.+
T Consensus       233 ~tG~~~~vdg  242 (249)
T 1o5i_A          233 LTGQTIVVDG  242 (249)
T ss_dssp             CCSCEEEEST
T ss_pred             CCCCEEEECC
Confidence            4588999987

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.89  E-value=6.6e-23  Score=178.91  Aligned_cols=207  Identities=14%  Similarity=0.086  Sum_probs=145.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++    ..+++|++|++++.++++       ++|+||
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPKGL----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTTS----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHh----cCeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45688999999999999999999999  99999999987665443    248899999998888775       689999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||||.....  .+.....++++       ..+++|+.++.++++++.    +.+.++||++||..+.....+     ...
T Consensus        87 ~~Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~~  152 (247)
T 1uzm_A           87 SNAGLSADA--FLMRMTEEKFE-------KVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN-----QAN  152 (247)
T ss_dssp             EECSCCC-------CCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C-----CHH
T ss_pred             ECCCCCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCC-----Chh
Confidence            999974321  11111122222       334889999888877664    457789999999876443221     256


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc-
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE-  298 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-  298 (331)
                      |..+|...+.+.+       ..++++++++||++.++....  ...........+  ...+.+++|+|++++.++..+. 
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p--~~~~~~~~dvA~~~~~l~s~~~~  230 (247)
T 1uzm_A          153 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIP--AKRVGTPAEVAGVVSFLASEDAS  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCT--TCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCC--CCCCcCHHHHHHHHHHHcCcccc
Confidence            9999998887665       258999999999997763210  000000000111  1246899999999999987643 


Q ss_pred             -cCCceEEecc
Q 046297          299 -AKFKAFDLAS  308 (331)
Q Consensus       299 -~~~~~~~i~~  308 (331)
                       ..|+.+++.+
T Consensus       231 ~~~G~~i~vdg  241 (247)
T 1uzm_A          231 YISGAVIPVDG  241 (247)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCcCCEEEECC
Confidence             4688999987

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=4.6e-23  Score=183.23  Aligned_cols=213  Identities=13%  Similarity=0.064  Sum_probs=150.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CC---CCcEEEccCCCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GG---ADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~---~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..   ++.++.+|++|++++.++++   
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999  99999999987655432       11   47789999999998888775   


Q ss_pred             ----CCCEEEEcccCCCCCCC--CCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKP--DFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~  216 (331)
                          ++|+||||||.......  .+.....+++       ...+++|+.++.++++++..    .+ ++||++||..+..
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~  153 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIY-------HKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGP  153 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSS
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccC
Confidence                69999999997432100  0001111112       23348899998888877653    45 7999999987654


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----------hhhccCCccccCCcc
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----------ELLVGKDDELLQTET  278 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----------~~~~~~~~~~~~~~~  278 (331)
                      ...+    ....|+.+|...+.+.+       ..|+++++|+||++.++.....           ..........+  ..
T Consensus       154 ~~~~----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~  227 (280)
T 1xkq_A          154 QAQP----DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP--IG  227 (280)
T ss_dssp             SCCC----SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT--TS
T ss_pred             CCCC----cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCC--CC
Confidence            3311    12579999999887665       3689999999999998742211           01111111111  12


Q ss_pred             cccCHHHHHHHHHHHhcCc-c--cCCceEEecc
Q 046297          279 RTIARADVAEVCIQALQFE-E--AKFKAFDLAS  308 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~-~--~~~~~~~i~~  308 (331)
                      .+.+++|+|++++.++..+ .  ..|+.+++.+
T Consensus       228 ~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdg  260 (280)
T 1xkq_A          228 AAGKPEHIANIILFLADRNLSFYILGQSIVADG  260 (280)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHhcCcccccCccCCeEEECC
Confidence            4689999999999998765 2  4688999987

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.89  E-value=1.1e-22  Score=184.42  Aligned_cols=229  Identities=14%  Similarity=0.094  Sum_probs=150.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-----chhhh-------cCCCCcEEEccCCCcccHHHHhc-
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-----ESKQK-------IGGADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-----~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++.+|+.     ++.+.       ....+.++.+|++|++++.++++ 
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            34678999999999999999999999  99999998863     12222       13458899999999999988886 


Q ss_pred             ------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCC
Q 046297          147 ------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~  216 (331)
                            ++|+||||||......  +.....+++       ...+++|+.|+.++++++    ++.+.++||++||..+..
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~~~--~~~~~~~~~-------~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~  151 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVFGP--AEAFTPEQF-------AELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAG  151 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBCSC--GGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             HHHHcCCCCEEEECCCcCCCCC--hhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhcc
Confidence                  7999999999743211  111111122       233489999998888887    666788999999987643


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh------------hccCCccccC--
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL------------LVGKDDELLQ--  275 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~------------~~~~~~~~~~--  275 (331)
                      ...+.    ...|..+|..++.+.+       ..|+++++|+||.+.++.......            ........+.  
T Consensus       152 ~~~~~----~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (324)
T 3u9l_A          152 GTPPY----LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEI  227 (324)
T ss_dssp             CCCSS----CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHH
T ss_pred             CCCCc----chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHH
Confidence            32221    2569999999987665       268999999999997653221100            0000000000  


Q ss_pred             ------CcccccCHHHHHHHHHHHhcCccc-CCceEEeccCCCCCCCCHHHHHHHHHHh
Q 046297          276 ------TETRTIARADVAEVCIQALQFEEA-KFKAFDLASKPEGTGTPTKDFKALFSQI  327 (331)
Q Consensus       276 ------~~~~~i~v~Dva~~~~~~l~~~~~-~~~~~~i~~~~~~~~~t~~e~~~~~~~~  327 (331)
                            ...+..+++|+|++++.+++.+.. ....+.++    +.......+.+.+.++
T Consensus       228 ~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g----p~~~~~~~~~~~~~~~  282 (324)
T 3u9l_A          228 KKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVD----PAEDGADVGFSVLDRL  282 (324)
T ss_dssp             HHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEEC----TTCCSHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeC----CcchHHHHHHHHHHHH
Confidence                  001225889999999999988742 23345554    4455655555555444

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.89  E-value=4e-23  Score=180.94  Aligned_cols=210  Identities=13%  Similarity=0.047  Sum_probs=148.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+++    ..++.++++|++|++++.++++       ++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45688999999999999999999999  99999999987665443    3457889999999998887775       47


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHH----HHHHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ----IDAAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~l----l~aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||.....  .+.....++++       ..+++|+.++..+    ++.+++.+ ++||++||..++.+..+    
T Consensus        82 d~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~----  147 (253)
T 1hxh_A           82 NVLVNNAGILLPG--DMETGRLEDFS-------RLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ----  147 (253)
T ss_dssp             CEEEECCCCCCCB--CTTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT----
T ss_pred             CEEEECCCCCCCC--CcccCCHHHHH-------HHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCC----
Confidence            9999999974321  11111122222       2337887765544    45555667 89999999877543322    


Q ss_pred             CcchHHHHHHHHHHHHHh-------c--CCCEEEEecCcccCCCcchh------hh-hccCCccccCCcccccCHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLAD-------S--GIPYTIIRAGGLQDKEGGIR------EL-LVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~~-------~--~~~~~ilrp~~v~g~~~~~~------~~-~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                       ...|..+|...+.+.+.       .  +++++++|||+++++.....      .. +.......+  ...+.+++|+|+
T Consensus       148 -~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~dvA~  224 (253)
T 1hxh_A          148 -YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNR--AGRAYMPERIAQ  224 (253)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBT--TCCEECHHHHHH
T ss_pred             -CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCc--cCCCCCHHHHHH
Confidence             25699999998877652       3  89999999999988742210      00 100000111  124679999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.++.  ..|+.+++.+
T Consensus       225 ~~~~l~s~~~~~~tG~~~~vdg  246 (253)
T 1hxh_A          225 LVLFLASDESSVMSGSELHADN  246 (253)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHcCccccCCCCcEEEECC
Confidence            9999998653  4588999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.89  E-value=3.1e-23  Score=184.91  Aligned_cols=213  Identities=18%  Similarity=0.159  Sum_probs=152.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCC---eEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQY---AARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~---~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      ...++++|||||+|+||++++++|+++  |+   +|++++|+.++.+++         ...+.++.+|++|++++.++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~--G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEA--SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHH--HTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHc--CCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            456789999999999999999999999  77   999999998765543         2347889999999999998886


Q ss_pred             -------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCC
Q 046297          147 -------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGT  215 (331)
Q Consensus       147 -------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~  215 (331)
                             ++|+||||||...... .+.....++++.       .+++|+.++.++++++    ++.+..+||++||..+.
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~~-~~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~  179 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGSD-RVGQIATEDIQD-------VFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR  179 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCCC-CTTSCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHHHhcCCCCEEEECCCcCCCCC-CcccCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence                   5899999999753211 111222222333       3489999988888776    55677899999998875


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc--CCcccccCHHHH
Q 046297          216 NLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL--QTETRTIARADV  286 (331)
Q Consensus       216 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dv  286 (331)
                      .....     ...|+.+|..++.+.+       ..|+++++|+||++.++...  ....+......  .....+++++|+
T Consensus       180 ~~~~~-----~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~p~~pedv  252 (287)
T 3rku_A          180 DAYPT-----GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL--VRYRGNEEQAKNVYKDTTPLMADDV  252 (287)
T ss_dssp             SCCTT-----CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH--HHTTTCHHHHHHHHTTSCCEEHHHH
T ss_pred             CCCCC-----CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc--ccccCcHHHHHHhhcccCCCCHHHH
Confidence            43322     2569999999887765       26899999999999876421  00111100000  011224589999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |++++.++..+.  ..|+++.+.+
T Consensus       253 A~~v~~l~s~~~~~i~g~~i~v~~  276 (287)
T 3rku_A          253 ADLIVYATSRKQNTVIADTLIFPT  276 (287)
T ss_dssp             HHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHHHHHhCCCCCeEecceEEeeC
Confidence            999999998765  3477888876

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.89  E-value=3e-23  Score=181.96  Aligned_cols=220  Identities=17%  Similarity=0.112  Sum_probs=158.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      ...++++|||||+|+||++++++|+++  |++|++++|++++.+++    ..++.++++|++|++++.++++       +
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            445789999999999999999999999  99999999998765543    3458899999999998887764       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +|+||||||.....  .+.....++++.       .+++|+.++..+++++...  .-.+||++||..+..+..+     
T Consensus        83 id~lv~nAg~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  148 (255)
T 4eso_A           83 IDLLHINAGVSELE--PFDQVSEASYDR-------QFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG-----  148 (255)
T ss_dssp             EEEEEECCCCCCCB--CGGGCCHHHHHH-------HHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT-----
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC-----
Confidence            89999999975321  111112222333       3489999999999998754  2248999999877544322     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---h-----hhccCCccccCCcccccCHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---E-----LLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~-----~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      ...|..+|...+.+.+       ..|++++.++||++.++.....   .     .........+  ...+.+++|+|+++
T Consensus       149 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~pedvA~~v  226 (255)
T 4eso_A          149 MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP--MKRNGTADEVARAV  226 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST--TSSCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC--CCCCcCHHHHHHHH
Confidence            2579999999887765       3589999999999988753210   0     0000000011  12357899999999


Q ss_pred             HHHhcCcc-cCCceEEeccCCCCCCCCHHH
Q 046297          291 IQALQFEE-AKFKAFDLASKPEGTGTPTKD  319 (331)
Q Consensus       291 ~~~l~~~~-~~~~~~~i~~~~~~~~~t~~e  319 (331)
                      +.++.+.. ..|+.+++.+   |...++.+
T Consensus       227 ~~L~s~~~~itG~~i~vdG---G~~~~l~~  253 (255)
T 4eso_A          227 LFLAFEATFTTGAKLAVDG---GLGQKLST  253 (255)
T ss_dssp             HHHHHTCTTCCSCEEEEST---TTTTTBCC
T ss_pred             HHHcCcCcCccCCEEEECC---CccccCcC
Confidence            99887533 4689999998   77666544

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=9.8e-23  Score=177.61  Aligned_cols=210  Identities=14%  Similarity=0.041  Sum_probs=149.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++++.+++..  ++.++.+|++|++++.++++       ++|+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            34678999999999999999999999  9999999999776554322  37889999999999888775       5899


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      ||||||.....  .+.....+++       ...+++|+.++.++++++..    .+.++||++||.. .....     ..
T Consensus        81 lvn~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~-----~~  145 (245)
T 1uls_A           81 VVHYAGITRDN--FHWKMPLEDW-------ELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNL-----GQ  145 (245)
T ss_dssp             EEECCCCCCCC--CGGGCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCT-----TC
T ss_pred             EEECCCCCCCC--ChhhCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCC-----Cc
Confidence            99999974321  0111111112       23348899998888777654    4677999999987 33222     12


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-h-hhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-R-ELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      ..|..+|...+.+.+       ..|+++++|+||++.++.... . ..........+.  ..+.+++|+|++++.++.++
T Consensus       146 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~--~~~~~~~dvA~~v~~l~s~~  223 (245)
T 1uls_A          146 ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL--GRAGKPLEVAYAALFLLSDE  223 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT--CSCBCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCC--CCCcCHHHHHHHHHHHhCch
Confidence            569999999877655       358999999999998774321 0 000000000111  23689999999999998765


Q ss_pred             c--cCCceEEecc
Q 046297          298 E--AKFKAFDLAS  308 (331)
Q Consensus       298 ~--~~~~~~~i~~  308 (331)
                      .  ..|+.+.+.+
T Consensus       224 ~~~~tG~~~~vdg  236 (245)
T 1uls_A          224 SSFITGQVLFVDG  236 (245)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             hcCCcCCEEEECC
Confidence            3  4688999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.89  E-value=4.1e-23  Score=182.89  Aligned_cols=212  Identities=16%  Similarity=0.130  Sum_probs=151.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh---hc---CCCCcEEEccCCCcccHHHHhc------
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ---KI---GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~---~l---~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|++++|++...+   ++   ...+.++++|++|++++.++.+      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            345789999999999999999999999  999999998753211   12   2347889999999998877654      


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+.++||++||..+..+..+  
T Consensus       106 ~iD~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--  174 (273)
T 3uf0_A          106 RVDVLVNNAGIIARA--PAEEVSLGRWR-------EVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN--  174 (273)
T ss_dssp             CCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--
T ss_pred             CCcEEEECCCCCCCC--CchhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC--
Confidence            799999999975431  11111222223       33488999988888766    4567789999999887654332  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh----hhccCCccccCCcccccCHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE----LLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                         ...|+.+|...+.+.+       ..|+++++|+||++.++......    .........+  ...+.+++|+|++++
T Consensus       175 ---~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~pedva~~v~  249 (273)
T 3uf0_A          175 ---VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIP--AGRWATPEDMVGPAV  249 (273)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST--TSSCBCGGGGHHHHH
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC--CCCCCCHHHHHHHHH
Confidence               2569999999887765       36899999999999987532110    0000000111  134678999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.++.  ..|+++++.+
T Consensus       250 ~L~s~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          250 FLASDAASYVHGQVLAVDG  268 (273)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCCcCCEEEECc
Confidence            9987653  4689999987

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.89  E-value=2.1e-22  Score=176.57  Aligned_cols=211  Identities=18%  Similarity=0.147  Sum_probs=148.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +++||||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++++|++|++++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999  99999999987654432       2357889999999999988886       7


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC-CCeEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG-AKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-vk~~v~~SS~~~~~~~~~~~  222 (331)
                      +|+||||||.....  .+.....+++       ...+++|+.++..+++++    ++.+ .++||++||..+......  
T Consensus        80 id~lv~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  148 (256)
T 1geg_A           80 FDVIVNNAGVAPST--PIESITPEIV-------DKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE--  148 (256)
T ss_dssp             CCEEEECCCCCCCB--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC--
Confidence            99999999964321  0111111122       223488888877766655    4445 679999999876543221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h---hhcc--CCc---ccc-C-CcccccCHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E---LLVG--KDD---ELL-Q-TETRTIARA  284 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~---~~~~--~~~---~~~-~-~~~~~i~v~  284 (331)
                         ...|..+|...+.+.+       ..++++++|+||++.++..... .   ...+  ...   .+. . ....+.+++
T Consensus       149 ---~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  225 (256)
T 1geg_A          149 ---LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE  225 (256)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHH
Confidence               2569999999887765       3589999999999988642110 0   0000  000   000 0 012468999


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEecc
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |+|++++.++.++.  ..|+.+.+.+
T Consensus       226 dvA~~v~~l~s~~~~~~tG~~i~vdG  251 (256)
T 1geg_A          226 DVAACVSYLASPDSDYMTGQSLLIDG  251 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHhCccccCCCCCEEEeCC
Confidence            99999999987653  4688999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.89  E-value=5.7e-23  Score=182.58  Aligned_cols=220  Identities=15%  Similarity=0.132  Sum_probs=156.0

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ...+++||||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++.+|++|++++.++++     
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFARE--GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            345788999999999999999999999  99999999997665442       2357888999999999888876     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||......+ +.....++++       ..+++|+.++.++++++.    +.+..+||++||..+.....+
T Consensus        83 ~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGE-ISSLSVEGWR-------ETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFA  154 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSC-GGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCT
T ss_pred             cCCCCEEEECCCCCCCCCC-hhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCC
Confidence              79999999997532111 1111222223       334889999888877764    445679999999876522211


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccc----c--CCcccccCHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDEL----L--QTETRTIARADVA  287 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~----~--~~~~~~i~v~Dva  287 (331)
                          ....|+.+|...+.+.+       ..++++++|+||++.++.....  ..+.....    .  .....+.+++|+|
T Consensus       155 ----~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~p~~r~~~pedvA  228 (280)
T 3tox_A          155 ----GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFAN--LPGAAPETRGFVEGLHALKRIARPEEIA  228 (280)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGG--STTCCTHHHHHHHTTSTTSSCBCHHHHH
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhh--ccccCHHHHHHHhccCccCCCcCHHHHH
Confidence                12579999999887765       3589999999999998753210  00000000    0  0113467999999


Q ss_pred             HHHHHHhcCcc--cCCceEEeccCCCCCCCCH
Q 046297          288 EVCIQALQFEE--AKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~  317 (331)
                      ++++.++.++.  ..|+++++.+   |...+.
T Consensus       229 ~~v~~L~s~~a~~itG~~i~vdG---G~~~~~  257 (280)
T 3tox_A          229 EAALYLASDGASFVTGAALLADG---GASVTK  257 (280)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST---TGGGCC
T ss_pred             HHHHHHhCccccCCcCcEEEECC---Cccccc
Confidence            99999998654  4689999998   654443

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.89  E-value=3.6e-23  Score=180.57  Aligned_cols=211  Identities=18%  Similarity=0.133  Sum_probs=152.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.++    +..++.++++|++|++++.++++       ++
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            45789999999999999999999999  9999999999866544    34568889999999999988876       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcC-CCeEEEEccCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAG-AKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~-vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      |+||||||.....  .+...+.++++       ..+++|+.++.+++++    +++.+ ..+||++||..+......   
T Consensus        82 d~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  149 (247)
T 3rwb_A           82 DILVNNASIVPFV--AWDDVDLDHWR-------KIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN---  149 (247)
T ss_dssp             SEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT---
T ss_pred             CEEEECCCCCCCC--CcccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC---
Confidence            9999999975321  11112222223       3348899998888777    55555 579999999876443322   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc---CCcccccCHHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL---QTETRTIARADVAEVCIQA  293 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~---~~~~~~i~v~Dva~~~~~~  293 (331)
                        ...|..+|...+.+.+       ..++++++++||++.++....  ..........   .....+.+++|+|++++.+
T Consensus       150 --~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L  225 (247)
T 3rwb_A          150 --MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKA--SPHNEAFGFVEMLQAMKGKGQPEHIADVVSFL  225 (247)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHH
T ss_pred             --chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccc--cChhHHHHHHhcccccCCCcCHHHHHHHHHHH
Confidence              2569999999887665       368999999999998753210  0000000000   1112357899999999999


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +.++.  ..|+++++.+
T Consensus       226 ~s~~~~~itG~~i~vdG  242 (247)
T 3rwb_A          226 ASDDARWITGQTLNVDA  242 (247)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCccccCCCCCEEEECC
Confidence            87653  4689999987

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.89  E-value=5.3e-23  Score=180.67  Aligned_cols=210  Identities=13%  Similarity=0.106  Sum_probs=150.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++||||||+|+||++++++|+++  |++|+++ .|+.++.+++       ..++.++.+|++|++++.++++      
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999  9999986 7876554332       3357899999999999888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||.....  .+.....++++       ..+++|+.++.++++++    ++.+..+||++||..+.....+ 
T Consensus        81 g~id~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-  150 (258)
T 3oid_A           81 GRLDVFVNNAASGVLR--PVMELEETHWD-------WTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN-  150 (258)
T ss_dssp             SCCCEEEECCCCCCCS--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT-
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC-
Confidence             579999999964321  11111112222       23488999988887776    4556679999999887544322 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ...|+.+|...+.+.+       ..++++++++||++.++.....    ..........+  ...+.+++|+|+++
T Consensus       151 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~~~dva~~v  224 (258)
T 3oid_A          151 ----YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP--AGRMVEIKDMVDTV  224 (258)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT--TSSCBCHHHHHHHH
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC--CCCCcCHHHHHHHH
Confidence                2579999999987765       2589999999999987643210    00000000111  13468999999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.++.  ..|+++++.+
T Consensus       225 ~~L~s~~~~~itG~~i~vdG  244 (258)
T 3oid_A          225 EFLVSSKADMIRGQTIIVDG  244 (258)
T ss_dssp             HHHTSSTTTTCCSCEEEEST
T ss_pred             HHHhCcccCCccCCEEEECC
Confidence            99998754  5689999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.89  E-value=3e-22  Score=173.86  Aligned_cols=209  Identities=15%  Similarity=0.056  Sum_probs=147.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi~~  154 (331)
                      ++++|||||+|+||++++++|+++  |++|++++|++++..+.. ++.++.+|++| +++.++++       ++|+||||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~-~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVAR--GYRVAIASRNPEEAAQSL-GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHH-TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhh-CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            478999999999999999999999  999999999976532211 27889999999 87776654       79999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      ||.....  .+.....++++       ..+++|+.++..+++++    ++.+.++||++||..++....+   .....|.
T Consensus        78 Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---~~~~~Y~  145 (239)
T 2ekp_A           78 AAVNVRK--PALELSYEEWR-------RVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP---VPIPAYT  145 (239)
T ss_dssp             CCCCCCC--CTTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---SCCHHHH
T ss_pred             CCCCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC---CCCccHH
Confidence            9974321  11111122222       33488888887777765    4567789999999876543311   1225799


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHHHHhcCcc-
Q 046297          231 VWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCIQALQFEE-  298 (331)
Q Consensus       231 ~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-  298 (331)
                      .+|...+.+.+       ..|++++++|||++.++.....    ..........+  ...+.+++|+|++++.++.++. 
T Consensus       146 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~dvA~~~~~l~s~~~~  223 (239)
T 2ekp_A          146 TAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP--MGRWARPEEIARVAAVLCGDEAE  223 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT--TSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC--CCCCcCHHHHHHHHHHHcCchhc
Confidence            99999887665       2589999999999988753211    00000000011  1246899999999999987643 


Q ss_pred             -cCCceEEecc
Q 046297          299 -AKFKAFDLAS  308 (331)
Q Consensus       299 -~~~~~~~i~~  308 (331)
                       ..|+.+++.+
T Consensus       224 ~~tG~~~~vdg  234 (239)
T 2ekp_A          224 YLTGQAVAVDG  234 (239)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCCCCEEEECC
Confidence             4688899887

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.89  E-value=1.9e-23  Score=184.80  Aligned_cols=213  Identities=13%  Similarity=0.015  Sum_probs=153.8

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc----
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      .+..++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++++|++|++++.++++    
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999  99999999987665432       3457889999999999988886    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+||||||.....  .+.....++++.       .+++|+.++.++++++    ++.+..+||++||..+..+..
T Consensus       100 ~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~  170 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRK--PMIELETADWQR-------VIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA  170 (271)
T ss_dssp             HTCCCCEEEECCCCCCCC--CGGGCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT
T ss_pred             HCCCCCEEEECCCCCCCC--CchhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC
Confidence               799999999974321  111112222333       3488999988886665    445667999999987654332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh----hhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE----LLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      +     ...|+.+|...+.+.+       ..|+++++++||++.++......    .........+  ...+.+++|+|+
T Consensus       171 ~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~pedva~  243 (271)
T 4ibo_A          171 T-----VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTP--AKRWGKPQELVG  243 (271)
T ss_dssp             T-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHST--TCSCBCGGGGHH
T ss_pred             C-----chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCC--CCCCcCHHHHHH
Confidence            2     2569999999887765       36899999999999887532110    0000000011  134578999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++..+.  ..|+++++.+
T Consensus       244 ~v~~L~s~~~~~itG~~i~vdG  265 (271)
T 4ibo_A          244 TAVFLSASASDYVNGQIIYVDG  265 (271)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCccccCCCCcEEEECC
Confidence            9999887653  4689999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.89  E-value=9.2e-23  Score=176.35  Aligned_cols=190  Identities=19%  Similarity=0.191  Sum_probs=132.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      +++||||||+|+||++++++|+++  |++|++++|++++.+.+.   .++.++.+|++|++++.++++       ++|+|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAK--GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467999999999999999999999  999999999876655432   258899999999998887775       78999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH----HHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN----QIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~----ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||.....  .+.....+++       ...+++|+.++..    +++.+++.+.++||++||..++.+..+     ..
T Consensus        83 i~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----~~  148 (234)
T 2ehd_A           83 VNNAGVGVMK--PVHELTLEEW-------RLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG-----GA  148 (234)
T ss_dssp             EECCCCCCCS--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT-----CH
T ss_pred             EECCCcCCCC--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC-----Cc
Confidence            9999964321  0111111112       2334788888764    455566677889999999887543322     25


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      .|+.+|...+.+.+       ..+++++++|||++.++.....      ...     ..+++++|+|++++.++.++.
T Consensus       149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~-----~~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          149 AYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT------PGQ-----AWKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc------ccc-----cCCCCHHHHHHHHHHHhCCCc
Confidence            79999998877654       3689999999999977642210      000     125899999999999998764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.89  E-value=9.3e-23  Score=181.17  Aligned_cols=210  Identities=17%  Similarity=0.116  Sum_probs=150.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .++++|||||+|+||++++++|+++  |++|++++|++++.+++       ...+.++.+|++|++++.++++       
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999  99999999987654432       3357899999999999888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH------cCCCeEEEEccCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA------AGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~------~~vk~~v~~SS~~~~~~~~~  220 (331)
                      ++|+||||||......  +.....+++       ...+++|+.++.++++++..      .+..+||++||..+......
T Consensus       101 ~id~lv~nAg~~~~~~--~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~  171 (279)
T 3sju_A          101 PIGILVNSAGRNGGGE--TADLDDALW-------ADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY  171 (279)
T ss_dssp             SCCEEEECCCCCCCSC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             CCcEEEECCCCCCCCC--hhhCCHHHH-------HHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC
Confidence            6899999999754311  111111122       23347899999888887644      56679999999887544322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC-------c----ccc-C-Ccccc
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD-------D----ELL-Q-TETRT  280 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-------~----~~~-~-~~~~~  280 (331)
                           ...|..+|..++.+.+       ..|+++++|+||++.++....  ......       .    .+. . ....+
T Consensus       172 -----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  244 (279)
T 3sju_A          172 -----AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAER--VREGYARHWGVTEQEVHERFNAKIPLGRY  244 (279)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHH--HHHSCCSSSCCCHHHHHHHHHTTCTTSSC
T ss_pred             -----ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHH--HHhhhhhcccCChHHHHHHHHhcCCCCCC
Confidence                 2569999999887765       368999999999998764211  100000       0    000 0 11345


Q ss_pred             cCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          281 IARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .+++|+|++++.++.++.  ..|+++++.+
T Consensus       245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdG  274 (279)
T 3sju_A          245 STPEEVAGLVGYLVTDAAASITAQALNVCG  274 (279)
T ss_dssp             BCHHHHHHHHHHHTSSGGGGCCSCEEEEST
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            789999999999988654  5689999987

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.89  E-value=4e-23  Score=182.32  Aligned_cols=213  Identities=12%  Similarity=0.004  Sum_probs=152.2

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh--------cCCCCcEEEccCCCcccHHHHhc---
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK--------IGGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~--------l~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      .+..+++||||||+|+||++++++|+++  |++|++++|++++.++        ...++.++++|++|++++.++++   
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999  9999999998766443        23458899999999999888775   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~  217 (331)
                          ++|+||||||.....  .+.....++++       ..+++|+.++..+++++.    +.+ -.+||++||..+..+
T Consensus        94 ~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHPQ--PVVDTDPQLFD-------ATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP  164 (266)
T ss_dssp             HHHTSCSEEEEECCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHcCCCCEEEECCCcCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC
Confidence                799999999975321  11111122222       334889999888877764    333 459999999887544


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADV  286 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dv  286 (331)
                      ..+     ...|..+|...+.+.+       ..++++++|+||++.++.....    ..........+  ...+.+++|+
T Consensus       165 ~~~-----~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~dv  237 (266)
T 4egf_A          165 LPD-----HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIP--LGRFAVPHEV  237 (266)
T ss_dssp             CTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCT--TSSCBCHHHH
T ss_pred             CCC-----ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCC--CCCCcCHHHH
Confidence            322     2569999999887665       3589999999999987642110    00000000011  1235789999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |++++.++.++.  ..|+++++.+
T Consensus       238 a~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          238 SDAVVWLASDAASMINGVDIPVDG  261 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhcCccCcEEEECC
Confidence            999999987653  4689999987

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.89  E-value=1.7e-22  Score=177.66  Aligned_cols=220  Identities=15%  Similarity=0.038  Sum_probs=147.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|++++.++    +...+.++.+|++|++++.++++       ++
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            45789999999999999999999999  9999999999876554    34568899999999999888876       78


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC----CCeEEEEccCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG----AKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~----vk~~v~~SS~~~~~~~~~  220 (331)
                      |+||||||....... +.....+++       ...+++|+.++.++++++.    +.+    ..+||++||..+..+...
T Consensus        85 d~li~~Ag~~~~~~~-~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  156 (261)
T 3n74_A           85 DILVNNAGIGHKPQN-AELVEPEEF-------DRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPN  156 (261)
T ss_dssp             CEEEECCCCCCCSCC-GGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTT
T ss_pred             CEEEECCccCCCCCC-cccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCC
Confidence            999999997532110 001111122       2334889999877777653    322    347999999876543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh--hhccCCcccc--CCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE--LLVGKDDELL--QTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~--~~~~~~i~v~Dva~~  289 (331)
                           ...|..+|...+.+.+       ..++++++++||++.++......  ........+.  .....+++++|+|++
T Consensus       157 -----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  231 (261)
T 3n74_A          157 -----LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEA  231 (261)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHH
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHH
Confidence                 2569999999887765       36899999999999887532110  0000000000  011346899999999


Q ss_pred             HHHHhcCcc--cCCceEEeccCCCCCCCCH
Q 046297          290 CIQALQFEE--AKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~~~~~~~~t~  317 (331)
                      ++.++..+.  ..|+++++.+   |..++.
T Consensus       232 ~~~l~s~~~~~itG~~i~vdg---G~~~~~  258 (261)
T 3n74_A          232 AAFLCSPQASMITGVALDVDG---GRSIGG  258 (261)
T ss_dssp             HHHHTSGGGTTCCSCEEEEST---TTTC--
T ss_pred             HHHHcCCcccCcCCcEEEecC---CcccCC
Confidence            999987543  4689999998   766554

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.89  E-value=1.7e-22  Score=180.90  Aligned_cols=217  Identities=15%  Similarity=0.117  Sum_probs=154.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc--hhhh-------cCCCCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE--SKQK-------IGGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~--~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ...++++|||||+|+||++++++|+++  |++|++++|+.+  ..+.       ...++.++.+|++|++++.++++   
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999  999999998732  1211       23457889999999998887775   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC--eEEEEccCCCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK--QIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk--~~v~~SS~~~~~~~~~  220 (331)
                          ++|+||||||...... .+.....++++       ..+++|+.++.++++++...-.+  +||++||..++.....
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~  195 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIP-EIKDLTSEQFQ-------QTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH  195 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCS-SGGGCCHHHHH-------HHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT
T ss_pred             HHcCCCCEEEECCCCcCCCC-CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC
Confidence                7999999999743211 11111222223       33489999999999999766433  9999999987554322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc----hhhhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG----IRELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                           ...|+.+|...+.+.+       ..|+++++|+||++.++...    ............+  ...+.+++|+|++
T Consensus       196 -----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~dvA~~  268 (294)
T 3r3s_A          196 -----LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP--MKRAGQPAELAPV  268 (294)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTST--TSSCBCGGGGHHH
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCC--CCCCcCHHHHHHH
Confidence                 2569999999887765       35899999999999886411    0011110001111  1345789999999


Q ss_pred             HHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          290 CIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      ++.++..+.  ..|+++++.+   |..+
T Consensus       269 v~~L~s~~~~~itG~~i~vdG---G~~l  293 (294)
T 3r3s_A          269 YVYLASQESSYVTAEVHGVCG---GEHL  293 (294)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST---TCCC
T ss_pred             HHHHhCccccCCCCCEEEECC---CccC
Confidence            999987654  4689999998   6543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.89  E-value=1.5e-22  Score=178.48  Aligned_cols=213  Identities=17%  Similarity=0.141  Sum_probs=151.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|+.++.+++       ..++.++++|++|++++.++++      
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999  99999999987655432       3357899999999999888875      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||...... .+.....++++.       .+++|+.++.++++++.    +.+ .+||++||..+.......
T Consensus        87 g~id~lv~nAg~~~~~~-~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  157 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMK-PFANTTFEHMRD-------AIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKY  157 (264)
T ss_dssp             SCCSEEEECCCSCCCCC-CGGGCCHHHHHH-------HHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTC
T ss_pred             CCCcEEEECCCCCCCCC-CchhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCcc
Confidence             6899999998743221 111122222233       34889999888887753    334 699999998775443322


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h-hh--ccCC-cc----c-cC-CcccccCH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E-LL--VGKD-DE----L-LQ-TETRTIAR  283 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~-~~--~~~~-~~----~-~~-~~~~~i~v  283 (331)
                           ..|..+|...+.+.+       ..|+++++++||+++++..... . ..  .+.. ..    + .. ....+.++
T Consensus       158 -----~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  232 (264)
T 3ucx_A          158 -----GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTE  232 (264)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBH
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCH
Confidence                 569999999887665       3689999999999988743210 0 00  0000 00    0 00 11346799


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+|++++.++.+..  ..|+++++.+
T Consensus       233 ~dvA~~v~~L~s~~~~~itG~~i~vdG  259 (264)
T 3ucx_A          233 DEVASAILFMASDLASGITGQALDVNC  259 (264)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEECC
Confidence            999999999987653  4689999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.89  E-value=4.1e-22  Score=176.88  Aligned_cols=214  Identities=18%  Similarity=0.158  Sum_probs=151.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC------------chhhh-------cCCCCcEEEccCCCcc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE------------ESKQK-------IGGADDLFIGDIRDSN  139 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~------------~~~~~-------l~~~~~~v~~Dl~d~~  139 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+.            ++.+.       ...++.++++|++|++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            345789999999999999999999999  99999999872            22221       2345889999999999


Q ss_pred             cHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEE
Q 046297          140 SIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIV  207 (331)
Q Consensus       140 ~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v  207 (331)
                      ++.++++       ++|+||||||.....      ...++++       ..+++|+.++.++++++.    +.+ ..+||
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~------~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv  154 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMS------AGDDGWH-------DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIV  154 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCS------STHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHCSCEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCC------CCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            9988886       799999999974321      1112223       344899999888888764    333 46899


Q ss_pred             EEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---hhh-----ccCCcc
Q 046297          208 LVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---ELL-----VGKDDE  272 (331)
Q Consensus       208 ~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~~~-----~~~~~~  272 (331)
                      ++||..+........ .....|+.+|...+.+.+       ..++++++|+||++.++.....   ...     ......
T Consensus       155 ~isS~~~~~~~~~~~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  233 (278)
T 3sx2_A          155 LISSSAGLAGVGSAD-PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPG  233 (278)
T ss_dssp             EECCGGGTSCCCCSS-HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--C
T ss_pred             EEccHHhcCCCccCC-CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhh
Confidence            999987654331111 122569999999887765       3579999999999998864310   000     011000


Q ss_pred             cc--CCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          273 LL--QTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       273 ~~--~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ..  .....+.+++|+|++++.++.++.  ..|+++++.+
T Consensus       234 ~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  273 (278)
T 3sx2_A          234 AMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDA  273 (278)
T ss_dssp             TTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECC
Confidence            11  111457899999999999987653  5689999987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.89  E-value=2.2e-22  Score=178.49  Aligned_cols=214  Identities=14%  Similarity=0.090  Sum_probs=153.2

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++++|++|++++.++++     
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999  99999999987765442       2358899999999999988886     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCC-CeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGA-KQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v-k~~v~~SS~~~~~~~~  219 (331)
                        ++|+||||||......  +.....+++       ...+++|+.++..+++++.    +.+. .+||++||..+.....
T Consensus       107 ~g~iD~lvnnAg~~~~~~--~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~  177 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQA--MLDMPLEEF-------QRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI  177 (276)
T ss_dssp             HSCCSEEEECCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC
T ss_pred             cCCCCEEEECCCCCCCCC--cccCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC
Confidence              7999999999753211  111111122       2334789999888877764    3343 6899999987644332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhccCCccccCCcccccCHHHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                      +   .....|..+|...+.+.+       ..++++++|+||++.++..... ..........+  ...+.+++|+|++++
T Consensus       178 ~---~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p--~~r~~~pedvA~~v~  252 (276)
T 3r1i_A          178 P---QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIP--LGRMGRPEELTGLYL  252 (276)
T ss_dssp             S---SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGST--TSSCBCGGGSHHHHH
T ss_pred             C---CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCC--CCCCcCHHHHHHHHH
Confidence            2   122579999999887765       3689999999999988754311 10000001111  123678999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.++.  ..|+++++.+
T Consensus       253 fL~s~~~~~itG~~i~vdG  271 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDG  271 (276)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHcCccccCccCcEEEECc
Confidence            9987654  4689999987

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=2.1e-22  Score=180.84  Aligned_cols=210  Identities=13%  Similarity=0.020  Sum_probs=148.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------------CCCCcEEEccCCCcccHHHHhc-
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------------GGADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------------~~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|+.++.+.+            ..++.++.+|++|++++.++++ 
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            45688999999999999999999999  99999999987654321            2357899999999999988876 


Q ss_pred             ------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCC
Q 046297          147 ------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~  216 (331)
                            ++|+||||||.....  .+......++       ...+++|+.++.++++++..    .+.++||++||.. ..
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~  163 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLS--PAEHISSKGW-------HAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA  163 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT
T ss_pred             HHHHcCCCCEEEECCCCCCCC--chhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc
Confidence                  599999999953221  0001111112       22348899999999998754    2357899999987 32


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCC--cchhh----hhccCCccccCCcccccCH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKE--GGIRE----LLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~--~~~~~----~~~~~~~~~~~~~~~~i~v  283 (331)
                      ...     ....|..+|...+.+.+       ..+++++++|||+++++.  .....    .........+  ...+.++
T Consensus       164 ~~~-----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~  236 (303)
T 1yxm_A          164 GFP-----LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP--AKRIGVP  236 (303)
T ss_dssp             CCT-----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST--TSSCBCT
T ss_pred             CCC-----cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc--ccCCCCH
Confidence            211     12569999998886665       248999999999999983  22111    1110000111  1246899


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+|++++.++..+.  ..|+.+++.+
T Consensus       237 ~dvA~~i~~l~~~~~~~~~G~~~~v~g  263 (303)
T 1yxm_A          237 EEVSSVVCFLLSPAASFITGQSVDVDG  263 (303)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCcccccCCCcEEEECC
Confidence            999999999987643  4688999987

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.89  E-value=3.1e-22  Score=176.51  Aligned_cols=213  Identities=14%  Similarity=0.014  Sum_probs=149.4

Q ss_pred             cCCCCeEEEECCCC-hhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c----CCCCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGG-RTGQIVYKKLKERSEQYAARGLVRTEESKQK----I----GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG-~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l----~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ...+++||||||+| .||++++++|+++  |++|++++|+.++.++    +    ..++.++++|++|++++.++++   
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            34578999999998 6999999999999  9999999998765433    2    2358899999999999888875   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-----CCCeEEEEccCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-----GAKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-----~vk~~v~~SS~~~~~~  217 (331)
                          ++|+||||||.....  .+.....+++       ...+++|+.++.++++++...     +..+||++||..+...
T Consensus        97 ~~~g~id~li~~Ag~~~~~--~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~  167 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQT--PVVDMTDEEW-------DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA  167 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC
T ss_pred             HHhCCCcEEEECCCcCCCC--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC
Confidence                689999999964321  1111111222       233488999988888877543     4568999999877544


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc--CCcccccCHHHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL--QTETRTIARADVAE  288 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~  288 (331)
                      ..+     ...|+.+|...+.+.+       ..++++++++||++.++....... ......+.  .....+.+++|+|+
T Consensus       168 ~~~-----~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~~~dva~  241 (266)
T 3o38_A          168 QHS-----QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRAAEPWEVAA  241 (266)
T ss_dssp             CTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHH
T ss_pred             CCC-----CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhcCCcCCCCCHHHHHH
Confidence            332     2569999999887765       368999999999998875321100 00000000  11134679999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++..+.  ..|+++++.+
T Consensus       242 ~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          242 TIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHcCccccCccCCEEEEcC
Confidence            9999987643  5689999987

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.89  E-value=2.3e-23  Score=188.85  Aligned_cols=229  Identities=16%  Similarity=0.124  Sum_probs=160.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC----------Cchhhh----c---CCCCcEEEccCCCcccH
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT----------EESKQK----I---GGADDLFIGDIRDSNSI  141 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~----------~~~~~~----l---~~~~~~v~~Dl~d~~~~  141 (331)
                      ...+++||||||+|+||++++++|+++  |++|++++|+          .+..+.    +   ...+.++.+|++|++++
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            345789999999999999999999999  9999999987          333222    1   23478899999999998


Q ss_pred             HHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC----------CC
Q 046297          142 IPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG----------AK  204 (331)
Q Consensus       142 ~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~----------vk  204 (331)
                      .++++       ++|+||||||.....  .+.....++++       ..+++|+.++..+++++...-          -.
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g  172 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIVRDR--MIANTSEEEFD-------AVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDG  172 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCC--CGGGCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHHccccCCCCCc
Confidence            88876       799999999975431  11111222222       334899999988888764321          14


Q ss_pred             eEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCc
Q 046297          205 QIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTE  277 (331)
Q Consensus       205 ~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~  277 (331)
                      +||++||..+......     ...|+.+|..++.+.+       ..|+++++|+|| +..+....  .. ..........
T Consensus       173 ~IV~isS~~~~~~~~~-----~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~--~~-~~~~~~~~~~  243 (322)
T 3qlj_A          173 RIINTSSGAGLQGSVG-----QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET--VF-AEMMATQDQD  243 (322)
T ss_dssp             EEEEECCHHHHHCBTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC--SC-CC--------
T ss_pred             EEEEEcCHHHccCCCC-----CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh--hh-hhhhhccccc
Confidence            8999999876443222     2569999999887765       268999999999 65543211  00 0000111222


Q ss_pred             ccccCHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCC-----------------CCHHHHHHHHHHhhcc
Q 046297          278 TRTIARADVAEVCIQALQFEE--AKFKAFDLASKPEGTG-----------------TPTKDFKALFSQITTR  330 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~-----------------~t~~e~~~~~~~~~g~  330 (331)
                      ..+.+++|+|++++.++....  ..|+.|++.+   |..                 ++..|+++.+.+++|+
T Consensus       244 ~~~~~pedva~~v~~L~s~~~~~itG~~i~vdG---G~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~  312 (322)
T 3qlj_A          244 FDAMAPENVSPLVVWLGSAEARDVTGKVFEVEG---GKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGK  312 (322)
T ss_dssp             CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEET---TEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHhCccccCCCCCEEEECC---CccccCCCcccccccCccCCCCHHHHHHHHHHHhhc
Confidence            456789999999999987654  4688999887   553                 4789999999998774

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.88  E-value=9.7e-23  Score=178.85  Aligned_cols=218  Identities=11%  Similarity=0.063  Sum_probs=151.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhcCCCCcEEEccCCCcccHHHHhc------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKIGGADDLFIGDIRDSNSIIPAIQ------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l~~~~~~v~~Dl~d~~~~~~~l~------~~d~Vi  152 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|+.++. +.+...+.++++|++|++++.++++      ++|+||
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            34688999999999999999999999  99999999976553 3355668999999999999988876      899999


Q ss_pred             EcccCCCCCCC--CCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc------------CCCeEEEEccCCCCCCC
Q 046297          153 ILTSAVPKMKP--DFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA------------GAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       153 ~~ag~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~------------~vk~~v~~SS~~~~~~~  218 (331)
                      ||||.......  .......+++       ...+++|+.++..+++++...            +-.+||++||..+....
T Consensus        85 ~nAg~~~~~~~~~~~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           85 NCAGTGNAIRVLSRDGVFSLAAF-------RKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             ECGGGSHHHHHHHHTCCCSHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             ECCCCCCCcccccccccCCHHHH-------HHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence            99996432100  0000111222       233489999999988887643            23489999998775432


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      .+     ...|..+|...+.+.+       ..++++++++||++.++....  ...........+. ...+.+++|+|++
T Consensus       158 ~~-----~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~r~~~p~dva~~  231 (257)
T 3tl3_A          158 IG-----QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPH-PSRLGNPDEYGAL  231 (257)
T ss_dssp             HH-----HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSS-SCSCBCHHHHHHH
T ss_pred             CC-----CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCC-CCCccCHHHHHHH
Confidence            21     2569999999887665       368999999999998875321  0000000001111 1346899999999


Q ss_pred             HHHHhcCcccCCceEEeccCCCCCCC
Q 046297          290 CIQALQFEEAKFKAFDLASKPEGTGT  315 (331)
Q Consensus       290 ~~~~l~~~~~~~~~~~i~~~~~~~~~  315 (331)
                      ++.++.++...|+++++.+   |...
T Consensus       232 v~~l~s~~~itG~~i~vdG---G~~~  254 (257)
T 3tl3_A          232 AVHIIENPMLNGEVIRLDG---AIRM  254 (257)
T ss_dssp             HHHHHHCTTCCSCEEEEST---TC--
T ss_pred             HHHHhcCCCCCCCEEEECC---CccC
Confidence            9999988667899999987   6543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.88  E-value=3.4e-22  Score=174.91  Aligned_cols=214  Identities=16%  Similarity=0.126  Sum_probs=151.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccC--CCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDI--RDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl--~d~~~~~~~l~---  146 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|++++.+++        ...+.++.+|+  +|++++.++++   
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            45789999999999999999999999  99999999997665432        12578999999  88888887775   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||...... .+.....++++.       .+++|+.++..+++++    ++.+.++||++||..+....
T Consensus        88 ~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  159 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVC-PMSEQNPQVWQD-------VMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR  159 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCS-CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC
T ss_pred             HhCCCCCEEEECCccCCCCC-CcccCCHHHHHH-------HHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC
Confidence                7999999999743211 111122222223       3489999988888776    55667899999998775433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH----hc--CCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA----DS--GIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~----~~--~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      ..     ...|+.+|...+.+.+    +.  .++++.++||++..+...  ......      ....+.+++|+|++++.
T Consensus       160 ~~-----~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~--~~~~~~------~~~~~~~p~dva~~~~~  226 (252)
T 3f1l_A          160 AN-----WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRA--SAFPTE------DPQKLKTPADIMPLYLW  226 (252)
T ss_dssp             TT-----CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHH--HHCTTC------CGGGSBCTGGGHHHHHH
T ss_pred             CC-----CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhh--hhCCcc------chhccCCHHHHHHHHHH
Confidence            22     2569999999887765    22  389999999999765321  111111      12346789999999999


Q ss_pred             HhcCcc--cCCceEEeccCCCCCCCCHHH
Q 046297          293 ALQFEE--AKFKAFDLASKPEGTGTPTKD  319 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~~~~~~~~t~~e  319 (331)
                      ++.++.  ..|+.+++.+   |...++.|
T Consensus       227 L~s~~~~~itG~~i~vdg---G~~~~~~q  252 (252)
T 3f1l_A          227 LMGDDSRRKTGMTFDAQP---GRKPGISQ  252 (252)
T ss_dssp             HHSGGGTTCCSCEEESSC---C-------
T ss_pred             HcCccccCCCCCEEEeCC---CcCCCCCC
Confidence            987754  4689999998   77666543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.88  E-value=3.8e-22  Score=178.27  Aligned_cols=213  Identities=13%  Similarity=0.066  Sum_probs=153.2

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh-h-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-K-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+.+... .       ...++.++++|++|++++.++++    
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999  999999999875321 1       12357889999999999888775    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~  221 (331)
                         ++|+||||||...... .+.....++++       ..+++|+.++.++++++...  ..++||++||..++..... 
T Consensus       122 ~~g~iD~lvnnAg~~~~~~-~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-  192 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQQ-GLEYITAEQLE-------KTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET-  192 (291)
T ss_dssp             HHSSCCEEEECCCCCCCCS-SGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT-
T ss_pred             HcCCCCEEEECCCCcCCCC-CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC-
Confidence               7899999999643211 01111222223       33489999999999999765  2358999999876543322 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                          ...|+.+|...+.+.+       ..++++++|+||++.++....   ...........+  ...+.+++|+|++++
T Consensus       193 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p--~~r~~~p~dvA~~v~  266 (291)
T 3ijr_A          193 ----LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVP--MQRPGQPYELAPAYV  266 (291)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTST--TSSCBCGGGTHHHHH
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCC--CCCCcCHHHHHHHHH
Confidence                2569999999987765       258999999999999874210   000010011111  134678999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++..+.  ..|+++++.+
T Consensus       267 ~L~s~~~~~itG~~i~vdG  285 (291)
T 3ijr_A          267 YLASSDSSYVTGQMIHVNG  285 (291)
T ss_dssp             HHHSGGGTTCCSCEEEESS
T ss_pred             HHhCCccCCCcCCEEEECC
Confidence            9987654  5689999987

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.88  E-value=1.6e-22  Score=178.82  Aligned_cols=212  Identities=17%  Similarity=0.065  Sum_probs=148.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+.++ .+.       ....+.++++|++|++++.++++    
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999  9999999996433 222       13358899999999999888876    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+||||||......  +.....+++       ...+++|+.++.++++++    ++.+.++||++||..+..+..
T Consensus       104 ~~g~id~li~nAg~~~~~~--~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  174 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKL--AIKMKTEDF-------HHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM  174 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             hcCCCCEEEECCCcCCCcc--cccCCHHHH-------HHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC
Confidence               7999999999754311  001111122       233488888887766665    445678999999987644332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h-hhccCCccccCCcccccCHHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E-LLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      +     ...|+.+|...+.+.+       ..++++++++||++.++..... . .........+  ...+.+++|+|+++
T Consensus       175 ~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~p~dvA~~i  247 (271)
T 4iin_A          175 G-----QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIP--LNRLGSAKEVAEAV  247 (271)
T ss_dssp             T-----CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCT--TCSCBCHHHHHHHH
T ss_pred             C-----chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCC--cCCCcCHHHHHHHH
Confidence            2     2569999999887665       3689999999999987753211 0 0000000111  13467999999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.++.  ..|+++++.+
T Consensus       248 ~~l~s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          248 AFLLSDHSSYITGETLKVNG  267 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCCCcCCCcCCEEEeCC
Confidence            99998654  5689999987

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.88  E-value=3.7e-22  Score=174.14  Aligned_cols=201  Identities=16%  Similarity=0.170  Sum_probs=142.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++++.+.+       ..++.++.+|++|++++.++++      
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAE--GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            44688999999999999999999999  99999999987655432       2357889999999999888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||.....  .+.....+++       ...+++|+.++.++++++.    +.+ ++||++||..+.....+ 
T Consensus        83 g~id~lv~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-  151 (247)
T 2jah_A           83 GGLDILVNNAGIMLLG--PVEDADTTDW-------TRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRN-  151 (247)
T ss_dssp             SCCSEEEECCCCCCCC--CSTTCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTT-
T ss_pred             CCCCEEEECCCCCCCC--chhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCC-
Confidence             799999999974321  1111111222       2334889999888877764    446 89999999876543221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                          ...|..+|...+.+.+       ..|+++++|+||++.++.....  ..........+ .+..+.+++|+|++++.
T Consensus       152 ----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~v~~  226 (247)
T 2jah_A          152 ----AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQAQDIAEAVRY  226 (247)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCHHHHHHHHHH
T ss_pred             ----CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCHHHHHHHHHH
Confidence                2569999998886654       3689999999999988642210  00000000111 12225899999999999


Q ss_pred             HhcCcc
Q 046297          293 ALQFEE  298 (331)
Q Consensus       293 ~l~~~~  298 (331)
                      ++.++.
T Consensus       227 l~s~~~  232 (247)
T 2jah_A          227 AVTAPH  232 (247)
T ss_dssp             HHHSCT
T ss_pred             HhCCCc
Confidence            997654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.88  E-value=1.3e-22  Score=179.07  Aligned_cols=218  Identities=12%  Similarity=0.048  Sum_probs=152.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc---C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ---G  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~---~  147 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.++.         ...+.++.+|++|++.+.++++   +
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            34688999999999999999999999  99999999997654432         1236788999999998888876   7


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|+||||||......  +.....+++       ...+++|+.++..+++    .+++.+.++||++||..+..+..+   
T Consensus        86 id~lv~nAg~~~~~~--~~~~~~~~~-------~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  153 (267)
T 3t4x_A           86 VDILINNLGIFEPVE--YFDIPDEDW-------FKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE---  153 (267)
T ss_dssp             CSEEEECCCCCCCCC--GGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT---
T ss_pred             CCEEEECCCCCCCCc--cccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc---
Confidence            999999999753311  111111122       2334889999665554    455567779999999887644322   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCcc------------ccC-Cccccc
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDE------------LLQ-TETRTI  281 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~------------~~~-~~~~~i  281 (331)
                        ...|..+|...+.+.+       ..++++++++||.+.++....  .....+....            .+. ....+.
T Consensus       154 --~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  231 (267)
T 3t4x_A          154 --MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLI  231 (267)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCB
T ss_pred             --chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCcc
Confidence              2579999999987765       247999999999998763210  0000000000            000 013568


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEeccCCCCCCCC
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      +++|+|++++.++.+..  ..|+++++.+   |...+
T Consensus       232 ~pedvA~~v~fL~s~~~~~itG~~i~vdG---G~~~s  265 (267)
T 3t4x_A          232 RPEEIAHLVTFLSSPLSSAINGSALRIDG---GLVRS  265 (267)
T ss_dssp             CTHHHHHHHHHHHSGGGTTCCSCEEEEST---TCSCS
T ss_pred             CHHHHHHHHHHHcCccccCccCCeEEECC---Ccccc
Confidence            99999999999987643  4689999998   66554

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.88  E-value=4.4e-22  Score=175.84  Aligned_cols=215  Identities=17%  Similarity=0.118  Sum_probs=150.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh-------cCCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK-------IGGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|+. +....       ...++.++.+|++|++++.++++     
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999  99999998543 32221       13458899999999999888776     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||......  +.....++++       ..+++|+.++.++++++    ++.+..+||++||..+.....+
T Consensus       101 ~g~id~li~nAg~~~~~~--~~~~~~~~~~-------~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  171 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDAT--FMKMTKGDWD-------AVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG  171 (269)
T ss_dssp             HSCCSEEEECCCCCCCBC--TTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             cCCCCEEEECCCcCCCcc--hhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC
Confidence              7999999999754321  1111222222       33488999988777765    3456679999999876443322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhc-cCCccccCCcccccCHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLV-GKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~-~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                           ...|+.+|...+.+.+       ..++++++++||++.++.....  .... ......+  ...+.+++|+|+++
T Consensus       172 -----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~~p~dvA~~v  244 (269)
T 3gk3_A          172 -----QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIP--VGRLGRPDEVAALI  244 (269)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCT--TSSCBCHHHHHHHH
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCC--cCCccCHHHHHHHH
Confidence                 2579999998887665       3589999999999988753211  0000 0000111  13456899999999


Q ss_pred             HHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          291 IQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +.++.++.  ..|+++++.+   |..+
T Consensus       245 ~~L~s~~~~~itG~~i~vdg---G~~~  268 (269)
T 3gk3_A          245 AFLCSDDAGFVTGADLAING---GMHM  268 (269)
T ss_dssp             HHHTSTTCTTCCSCEEEEST---TSCC
T ss_pred             HHHhCCCcCCeeCcEEEECC---CEeC
Confidence            99987654  5689999998   6544

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.88  E-value=3e-23  Score=182.59  Aligned_cols=221  Identities=15%  Similarity=0.129  Sum_probs=153.4

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCc---hhhhcC---CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEE---SKQKIG---GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~---~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+  |+||++++++|+++  |++|++++|+++   ..+++.   +.+.++.+|++|++++.++++     
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            456889999999  99999999999999  999999999874   222221   237889999999999888876     


Q ss_pred             --CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||.....  ...+.....++++       ..+++|+.++.++++++...-  -++||++||..+..+..+
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  156 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWL-------LALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK  156 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHH-------HHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCC
Confidence              789999999974320  0001111122222       334899999999999987651  258999999876543222


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                           ...|+.+|...+.+.+       ..++++++++||+++++....    ...........+  ...+.+++|+|++
T Consensus       157 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~dva~~  229 (261)
T 2wyu_A          157 -----YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAP--LRRNITQEEVGNL  229 (261)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHST--TSSCCCHHHHHHH
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCC--CCCCCCHHHHHHH
Confidence                 2569999999887765       248999999999999875321    000000000011  1235789999999


Q ss_pred             HHHHhcCcc--cCCceEEeccCCCCCCCCHHH
Q 046297          290 CIQALQFEE--AKFKAFDLASKPEGTGTPTKD  319 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e  319 (331)
                      ++.++..+.  ..|++|++.+   |...+..|
T Consensus       230 v~~l~s~~~~~~tG~~~~vdg---G~~~~~~~  258 (261)
T 2wyu_A          230 GLFLLSPLASGITGEVVYVDA---GYHIMGME  258 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST---TGGGBC--
T ss_pred             HHHHcChhhcCCCCCEEEECC---CccccCCC
Confidence            999987643  3588999998   65554433

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.88  E-value=2e-22  Score=178.27  Aligned_cols=211  Identities=17%  Similarity=0.143  Sum_probs=143.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++||||||+|+||++++++|+++  |++|+++ .|+.+..+.+       ..++.++.+|++|++++.++++       
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999  9999887 5655443332       2457899999999999888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-------CCCeEEEEccCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-------GAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-------~vk~~v~~SS~~~~~~~~  219 (331)
                      ++|+||||||...... .+.....+++       ...+++|+.++..+++++...       +.++||++||..+.....
T Consensus       104 ~id~li~nAg~~~~~~-~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  175 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQ-RVDEMSVERI-------ERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA  175 (272)
T ss_dssp             CCCEEEECCCCCCCCC-CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT
T ss_pred             CCCEEEECCCCCCCCC-ChhhCCHHHH-------HHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC
Confidence            6899999999754311 0111122222       333489999998888877543       345899999987643322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---hhhccCCccccCCcccccCHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---ELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      +    ....|+.+|...+.+.+       ..++++++++||++.++.....   ..........+  ...+.+++|+|++
T Consensus       176 ~----~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~edvA~~  249 (272)
T 4e3z_A          176 T----QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVP--MQRAGMPEEVADA  249 (272)
T ss_dssp             T----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCT--TSSCBCHHHHHHH
T ss_pred             C----CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCC--cCCCcCHHHHHHH
Confidence            1    12469999999987655       3489999999999998753211   00000000011  1235689999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..|++|++.+
T Consensus       250 i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          250 ILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCCccccccCCEEeecC
Confidence            999997653  4689999987

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.88  E-value=3.3e-22  Score=176.67  Aligned_cols=211  Identities=16%  Similarity=0.097  Sum_probs=149.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      ...+++||||||+|+||++++++|+++  |++|++++|+++...   .....+++|++|++++.++++       ++|+|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKSDV---NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCC--CT---TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhcc---CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            445789999999999999999999999  999999999876542   357889999999999888876       79999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||......  +.....+++       ...+++|+.++..+++++    ++.+.++||++||..++.....     ..
T Consensus        86 v~nAg~~~~~~--~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~  151 (269)
T 3vtz_A           86 VNNAGIEQYSP--LHLTPTEIW-------RRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN-----AA  151 (269)
T ss_dssp             EECCCCCCCCC--GGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT-----CH
T ss_pred             EECCCcCCCCC--cccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC-----Ch
Confidence            99999743211  111111112       233478999988777765    4456779999999987654332     25


Q ss_pred             hHHHHHHHHHHHHH----h--cCCCEEEEecCcccCCCcchh-hhhccCCc--------ccc--CCcccccCHHHHHHHH
Q 046297          228 NILVWKRKAEQYLA----D--SGIPYTIIRAGGLQDKEGGIR-ELLVGKDD--------ELL--QTETRTIARADVAEVC  290 (331)
Q Consensus       228 ~y~~sK~~~e~~~~----~--~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~--------~~~--~~~~~~i~v~Dva~~~  290 (331)
                      .|+.+|...+.+.+    +  .++++++|+||++.++..... ........        .+.  .....+.+++|+|+++
T Consensus       152 ~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  231 (269)
T 3vtz_A          152 AYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVV  231 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            79999999987765    2  279999999999988642210 00000000        000  0113467899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.++.  ..|+++++.+
T Consensus       232 ~~L~s~~~~~itG~~i~vdG  251 (269)
T 3vtz_A          232 AFLASDRSSFITGACLTVDG  251 (269)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCCccCCCcCcEEEECC
Confidence            99987653  4689999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.88  E-value=1.3e-22  Score=180.08  Aligned_cols=212  Identities=14%  Similarity=0.035  Sum_probs=151.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c----CCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I----GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l----~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ...++++|||||+|+||++++++|+++  |++|++++|+.++..+    +    ..++.++++|++|++++.++++    
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999  9999999998765432    1    3457899999999999888875    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+||||||.....  .+.....++++       ..+++|+.++.++++++.    +.+..+||++||..+.....
T Consensus       102 ~~g~id~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  172 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFLC--PAGALSFNAFK-------TVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA  172 (277)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT
T ss_pred             HcCCCCEEEECCcCCCCC--CcccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC
Confidence               799999999964321  11111222222       334899999988888763    34456999999987654332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----hhhccCCccccCCcccccCHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      .     ...|+.+|...+.+.+       ..|+++++|+||++.++.....     ..........+  ...+.+++|+|
T Consensus       173 ~-----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~dvA  245 (277)
T 4fc7_A          173 L-----QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP--LQRLGNKTEIA  245 (277)
T ss_dssp             T-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST--TSSCBCHHHHH
T ss_pred             C-----cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC--CCCCcCHHHHH
Confidence            2     2569999999887765       3589999999999988632100     00000000011  12367899999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++.++....  ..|+++++.+
T Consensus       246 ~~v~fL~s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          246 HSVLYLASPLASYVTGAVLVADG  268 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHcCCccCCcCCCEEEECC
Confidence            99999997643  5689999987

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.88  E-value=3.2e-22  Score=174.63  Aligned_cols=209  Identities=18%  Similarity=0.155  Sum_probs=144.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      |++|||||+|+||++++++|+++  |++|++++|++++.+++    ..++.++.+|++|++++.++++       ++|+|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            47999999999999999999999  99999999997665443    3457889999999999998876       68999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||...... .+.....+++       ...+++|+.++..+++++.    +.+.++||++||..+..+..+     ..
T Consensus        79 vnnAg~~~~~~-~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----~~  145 (248)
T 3asu_A           79 VNNAGLALGME-PAHKASVEDW-------ETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG-----GN  145 (248)
T ss_dssp             EECCCCCCCCS-CGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-----CH
T ss_pred             EECCCcCCCCC-chhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCC-----Cc
Confidence            99999742111 0111111222       2334889999877777654    557789999999876543222     25


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCccc-CCCcchhhhhccCCcccc--CCcccccCHHHHHHHHHHHhcCc
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQ-DKEGGIRELLVGKDDELL--QTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~-g~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      .|+.+|...+.+.+       ..++++++++||++. .+.....  ..+......  .....+.+++|+|++++.++.++
T Consensus       146 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--FKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------CCBCHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc--ccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCC
Confidence            79999999988765       258999999999998 4532110  000000000  01123579999999999999875


Q ss_pred             c-cCCceEEecc
Q 046297          298 E-AKFKAFDLAS  308 (331)
Q Consensus       298 ~-~~~~~~~i~~  308 (331)
                      . ..++.+.+..
T Consensus       224 ~~~~g~~i~v~~  235 (248)
T 3asu_A          224 AHVNINTLEMMP  235 (248)
T ss_dssp             TTCCCCEEEECC
T ss_pred             ccceeeEEEEcc
Confidence            4 4566777664

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.88  E-value=3.2e-22  Score=177.05  Aligned_cols=204  Identities=18%  Similarity=0.121  Sum_probs=138.4

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------C
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      ...++++|||||+|+||++++++|+++  |++|++++|+.++.++    +..++.++++|++|++++.++++       +
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGA--GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGR  102 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            445788999999999999999999999  9999999999776544    34568999999999999988876       7


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC--CCeEEEEccCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG--AKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~--vk~~v~~SS~~~~~~~~~~  221 (331)
                      +|+||||||...... .+.....+++       ...+++|+.++..+++++    ++.+  -.+||++||..+..+..+ 
T Consensus       103 iD~lVnnAg~~~~~~-~~~~~~~~~~-------~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~-  173 (272)
T 4dyv_A          103 VDVLFNNAGTGAPAI-PMEDLTFAQW-------KQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY-  173 (272)
T ss_dssp             CCEEEECCCCCCCSS-CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT-
T ss_pred             CCEEEECCCCCCCCC-ChhhCCHHHH-------HHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC-
Confidence            999999999743211 0111112222       233488999977776665    4443  459999999887654332 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc-CCcccccCHHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL-QTETRTIARADVAEVCIQA  293 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~  293 (331)
                          ...|+.+|..++.+.+       ..++++++++||++.++....  ...+...... .....+.+++|+|++++.+
T Consensus       174 ----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~pedvA~~v~fL  247 (272)
T 4dyv_A          174 ----SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK--MKAGVPQADLSIKVEPVMDVAHVASAVVYM  247 (272)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------CHHHHHHHHHHH
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh--hcccchhhhhcccccCCCCHHHHHHHHHHH
Confidence                2569999999987765       368999999999998875321  1111111000 1123468999999999999


Q ss_pred             hcCccc
Q 046297          294 LQFEEA  299 (331)
Q Consensus       294 l~~~~~  299 (331)
                      +..+..
T Consensus       248 ~s~~~~  253 (272)
T 4dyv_A          248 ASLPLD  253 (272)
T ss_dssp             HHSCTT
T ss_pred             hCCCCc
Confidence            987753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.88  E-value=3e-22  Score=177.21  Aligned_cols=209  Identities=18%  Similarity=0.152  Sum_probs=142.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C--CCCcEEEccCCCcccHHHHhcC-------CC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G--GADDLFIGDIRDSNSIIPAIQG-------ID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~--~~~~~v~~Dl~d~~~~~~~l~~-------~d  149 (331)
                      +++|||||+|+||++++++|+++  |++|++++|++++.+++    .  .++.++.+|++|++++.++++.       +|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEA--GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999  99999999997665442    2  2578899999999999988864       59


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCC-eEEEEccCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAK-QIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk-~~v~~SS~~~~~~~~~~~~~  224 (331)
                      +||||||...... .+.....+++       ...+++|+.++..++++    +++.+.+ +||++||..+..+...    
T Consensus       100 ~lvnnAG~~~~~~-~~~~~~~~~~-------~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~----  167 (272)
T 2nwq_A          100 GLINNAGLALGTD-PAQSCDLDDW-------DTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPG----  167 (272)
T ss_dssp             EEEECCCCCCCCC-CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTT----
T ss_pred             EEEECCCCCCCCC-CcccCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCC----
Confidence            9999999743211 1111111222       23348898886665554    4566777 9999999877543221    


Q ss_pred             CcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchhhhhccCCcccc--CCcccccCHHHHHHHHHHHhc
Q 046297          225 GNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELL--QTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~l~  295 (331)
                       ...|..+|...+.+.+.       .|+++++|+||++.++.....  ..+......  .....+++++|+|++++.++.
T Consensus       168 -~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s  244 (272)
T 2nwq_A          168 -SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGDQARYDKTYAGAHPIQPEDIAETIFWIMN  244 (272)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHHT
T ss_pred             -CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccchHHHHHhhccCCCCCHHHHHHHHHHHhC
Confidence             25699999999987762       589999999999988753210  000000000  011235799999999999998


Q ss_pred             Ccc-cCCceEEecc
Q 046297          296 FEE-AKFKAFDLAS  308 (331)
Q Consensus       296 ~~~-~~~~~~~i~~  308 (331)
                      .+. ..++.+.+..
T Consensus       245 ~~~~~~g~~i~v~~  258 (272)
T 2nwq_A          245 QPAHLNINSLEIMP  258 (272)
T ss_dssp             SCTTEEEEEEEEEE
T ss_pred             CCccCccceEEEee
Confidence            654 3456666654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.88  E-value=3.3e-22  Score=178.12  Aligned_cols=217  Identities=16%  Similarity=0.126  Sum_probs=152.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC------------Cchhhh-------cCCCCcEEEccCCCcc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT------------EESKQK-------IGGADDLFIGDIRDSN  139 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~------------~~~~~~-------l~~~~~~v~~Dl~d~~  139 (331)
                      ...+++||||||+|+||++++++|+++  |++|++++|+            .+..++       ...++.++++|++|++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            445789999999999999999999999  9999999987            222211       2345789999999999


Q ss_pred             cHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEc
Q 046297          140 SIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVG  210 (331)
Q Consensus       140 ~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~S  210 (331)
                      ++.++++       ++|+||||||.....   . ....++++..       +++|+.++.++++++...  +-.+||++|
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~---~-~~~~~~~~~~-------~~~N~~g~~~l~~~~~~~~~~~g~iv~is  153 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLG---A-HLPVQAFADA-------FDVDFVGVINTVHAALPYLTSGASIITTG  153 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCC---T-TCCTHHHHHH-------HHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCccc---C-cCCHHHHHHH-------hhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence            9888776       799999999975432   0 1222233333       489999999999998765  345899999


Q ss_pred             cCCCCCCC--CCC---CC-CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh---hhcc----CC
Q 046297          211 SMGGTNLN--HPL---NS-LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE---LLVG----KD  270 (331)
Q Consensus       211 S~~~~~~~--~~~---~~-~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~---~~~~----~~  270 (331)
                      |..+....  .+.   .+ .....|+.+|...+.+.+       ..|+++++|+||++.++......   ....    ..
T Consensus       154 S~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  233 (287)
T 3pxx_A          154 SVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPS  233 (287)
T ss_dssp             CHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred             cchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccch
Confidence            98543211  000   00 112569999999887765       25899999999999987643110   1100    00


Q ss_pred             c--------cccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          271 D--------ELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       271 ~--------~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .        ........+.+++|+|++++.++.+..  ..|+++++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG  281 (287)
T 3pxx_A          234 RADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDA  281 (287)
T ss_dssp             HHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence            0        000111457899999999999987653  4689999987

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.88  E-value=2.4e-22  Score=181.92  Aligned_cols=203  Identities=14%  Similarity=0.055  Sum_probs=137.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CC--CCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GG--ADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~--~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+.++.+++       ..  .+.++.+|++|++++.++++   
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999  99999999998765432       11  57889999999999888875   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----------CCCeEEEEccC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----------GAKQIVLVGSM  212 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~vk~~v~~SS~  212 (331)
                          ++|+||||||.....  .+......++       ...+++|+.|+.++++++...          +-.+||++||.
T Consensus        83 ~~~g~id~lv~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~  153 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQ--PIEESSYDDW-------DWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASM  153 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCG
T ss_pred             HhCCCCCEEEECCCcCCCC--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccc
Confidence                679999999974321  1111111222       234489999998888876533          24589999999


Q ss_pred             CCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhh----hccCCc--------cc
Q 046297          213 GGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIREL----LVGKDD--------EL  273 (331)
Q Consensus       213 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~----~~~~~~--------~~  273 (331)
                      .+......     ...|..+|..++.+.+       ..|+++++|+||++.++.......    +.+...        .+
T Consensus       154 a~~~~~~~-----~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (319)
T 3ioy_A          154 AAFLAAGS-----PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERL  228 (319)
T ss_dssp             GGTCCCSS-----SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------
T ss_pred             ccccCCCC-----CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHH
Confidence            87544322     2569999996665443       468999999999998865321110    000000        00


Q ss_pred             cCCcccccCHHHHHHHHHHHhcCc
Q 046297          274 LQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       274 ~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      .......++++|+|+.++.+++.+
T Consensus       229 ~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          229 AGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             HHhhhcCCCHHHHHHHHHHHHHcC
Confidence            011112279999999999999875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=2.1e-22  Score=176.48  Aligned_cols=212  Identities=15%  Similarity=0.124  Sum_probs=147.8

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe-cCCchhhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV-RTEESKQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~-R~~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ...+++||||||+|+||++++++|+++  |++|++++ |+.++...       ...++.++.+|++|.+++.++++    
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            345788999999999999999999999  99999988 44433222       23458899999999999888876    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+||||||.....  .+.....++++       ..+++|+.++.+++++    +++.+.++||++||..+..+..
T Consensus        88 ~~g~id~lv~~Ag~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDV--VFRKMTREDWQ-------AVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF  158 (256)
T ss_dssp             HTCCEEEEEECCCCCCCC--CTTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS
T ss_pred             hcCCCCEEEECCCCCCCC--chhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC
Confidence               689999999975432  11112222223       3348899997666555    4566778999999987754433


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      +     ...|+.+|...+.+.+       ..++++++++||++.++....  ...........+  ...+.+++|+|+++
T Consensus       159 ~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~  231 (256)
T 3ezl_A          159 G-----QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIP--VRRLGSPDEIGSIV  231 (256)
T ss_dssp             C-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHST--TSSCBCHHHHHHHH
T ss_pred             C-----CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCC--CCCCcCHHHHHHHH
Confidence            2     2579999998887665       368999999999998763210  000000000011  13467899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++..+.  ..|+++++.+
T Consensus       232 ~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          232 AWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCCcccCCcCcEEEECC
Confidence            99987543  5689999987

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=1.2e-22  Score=179.51  Aligned_cols=222  Identities=10%  Similarity=0.035  Sum_probs=153.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      +.+++||||||+|+||++++++|+++  |++|++++|++++.+.+.   ..+.++++|++|++++.++++       ++|
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   84 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD   84 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            45688999999999999999999999  999999999876654432   247889999999999888875       789


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      +||||||......+ +.....++++       ..+++|+.++.++++++..   .+.++||++||..+.....     ..
T Consensus        85 ~lv~nAg~~~~~~~-~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----~~  151 (270)
T 1yde_A           85 CVVNNAGHHPPPQR-PEETSAQGFR-------QLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-----QA  151 (270)
T ss_dssp             EEEECCCCCCCCCC-GGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----TC
T ss_pred             EEEECCCCCCCCCC-cccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-----CC
Confidence            99999997432110 1011111122       3348899999888887753   1247999999986533222     12


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh--------hhccCCccccCCcccccCHHHHHHHHH
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE--------LLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                      ..|+.+|...+.+.+       ..|+++++|+||+++++......        .........+  ...+.+++|+|++++
T Consensus       152 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~dva~~v~  229 (270)
T 1yde_A          152 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP--LGRMGQPAEVGAAAV  229 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST--TSSCBCHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC--CCCCcCHHHHHHHHH
Confidence            569999999987765       36899999999999987421100        0000000011  123578999999999


Q ss_pred             HHhcCcc-cCCceEEeccCCCCCCCCHHHHH
Q 046297          292 QALQFEE-AKFKAFDLASKPEGTGTPTKDFK  321 (331)
Q Consensus       292 ~~l~~~~-~~~~~~~i~~~~~~~~~t~~e~~  321 (331)
                      .++.+.. ..|+++.+.+   |....+....
T Consensus       230 ~L~s~~~~itG~~i~vdG---G~~~~~~~~~  257 (270)
T 1yde_A          230 FLASEANFCTGIELLVTG---GAELGYGCKA  257 (270)
T ss_dssp             HHHHHCTTCCSCEEEEST---TTTSCC----
T ss_pred             HHcccCCCcCCCEEEECC---CeecccCcCc
Confidence            9887533 4688999998   7666554443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.88  E-value=2.5e-22  Score=175.82  Aligned_cols=204  Identities=15%  Similarity=0.096  Sum_probs=145.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCc--hhhhc-----CCCCcEEEccCCCc-ccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEE--SKQKI-----GGADDLFIGDIRDS-NSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~--~~~~l-----~~~~~~v~~Dl~d~-~~~~~~l~----  146 (331)
                      +.+++|+||||+|+||++++++|+++  |++ |++++|+++  ..+++     ...+.++.+|++|+ +++.++++    
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            34688999999999999999999999  997 999999863  22222     12478899999998 87877765    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C---CCeEEEEccCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G---AKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~---vk~~v~~SS~~~~~  216 (331)
                         ++|+||||||...          ..+++..+       ++|+.++.++++++...    +   ..+||++||..++.
T Consensus        81 ~~g~id~lv~~Ag~~~----------~~~~~~~~-------~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~  143 (254)
T 1sby_A           81 QLKTVDILINGAGILD----------DHQIERTI-------AINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN  143 (254)
T ss_dssp             HHSCCCEEEECCCCCC----------TTCHHHHH-------HHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS
T ss_pred             hcCCCCEEEECCccCC----------HHHHhhhh-------eeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc
Confidence               7999999999631          12334444       88999999998887643    1   35799999987754


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHh-------cCCCEEEEecCcccCCCcchhhhhccCCccc--cCCcccccCHHHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLAD-------SGIPYTIIRAGGLQDKEGGIRELLVGKDDEL--LQTETRTIARADVA  287 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva  287 (331)
                      +..+     ...|..+|...+.+.+.       .++++++++||++.++...............  .....+..+++|+|
T Consensus       144 ~~~~-----~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA  218 (254)
T 1sby_A          144 AIHQ-----VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCG  218 (254)
T ss_dssp             CCTT-----SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHH
T ss_pred             CCCC-----chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHH
Confidence            3322     25699999998877652       6899999999999886421100000000000  00123445899999


Q ss_pred             HHHHHHhcCcccCCceEEecc
Q 046297          288 EVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      ++++.+++. ...|+.|++.+
T Consensus       219 ~~i~~~~~~-~~~G~~~~v~g  238 (254)
T 1sby_A          219 QNFVKAIEA-NKNGAIWKLDL  238 (254)
T ss_dssp             HHHHHHHHH-CCTTCEEEEET
T ss_pred             HHHHHHHHc-CCCCCEEEEeC
Confidence            999998863 35688999987

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=1.4e-22  Score=178.53  Aligned_cols=210  Identities=14%  Similarity=0.060  Sum_probs=150.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++++.+++    ..++.++.+|++|++++.++++       ++
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45688999999999999999999999  99999999998765443    3457889999999998888775       57


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCCCCCCCCCc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      |+||||||......  +.....+++       ...+++|+.++.++++++...-  .++||++||..++ .. +    ..
T Consensus        82 D~lvnnAg~~~~~~--~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~-~----~~  146 (263)
T 2a4k_A           82 HGVAHFAGVAHSAL--SWNLPLEAW-------EKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA-F----GL  146 (263)
T ss_dssp             CEEEEGGGGTTTTC------CHHHH-------HHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH-H----HH
T ss_pred             cEEEECCCCCCCCC--hhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC-C----Cc
Confidence            99999999743210  111111112       2334889999999999887653  3599999999875 21 1    12


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      ..|..+|...+.+.+       ..|+++++++||++.++.....  ..........+  ...+.+++|+|++++.++.++
T Consensus       147 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p--~~~~~~p~dvA~~v~~l~s~~  224 (263)
T 2a4k_A          147 AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASP--LGRAGRPEEVAQAALFLLSEE  224 (263)
T ss_dssp             HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTST--TCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCC--CCCCcCHHHHHHHHHHHhCcc
Confidence            569999998776654       3589999999999988743210  00000000011  123689999999999998765


Q ss_pred             c--cCCceEEecc
Q 046297          298 E--AKFKAFDLAS  308 (331)
Q Consensus       298 ~--~~~~~~~i~~  308 (331)
                      .  ..|+.+++.+
T Consensus       225 ~~~~tG~~i~vdg  237 (263)
T 2a4k_A          225 SAYITGQALYVDG  237 (263)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             ccCCcCCEEEECC
Confidence            3  4688999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.88  E-value=1.2e-21  Score=175.64  Aligned_cols=214  Identities=12%  Similarity=0.085  Sum_probs=151.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC------------chhh-------hcCCCCcEEEccCCCccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE------------ESKQ-------KIGGADDLFIGDIRDSNS  140 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~------------~~~~-------~l~~~~~~v~~Dl~d~~~  140 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++            ++.+       ....++.++++|++|+++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            45789999999999999999999999  99999999872            2221       123458899999999999


Q ss_pred             HHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----c-CCCeEEE
Q 046297          141 IIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----A-GAKQIVL  208 (331)
Q Consensus       141 ~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~-~vk~~v~  208 (331)
                      +.++++       ++|+||||||...... .+.....++++.       .+++|+.++..+++++..    . +..+||+
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~  175 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGT-RLNRMDPKTWRD-------MIDVNLNGAWITARVAIPHIMAGKRGGSIVF  175 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCC-CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCC-chhhCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            888875       7999999999754321 111222223333       348999998888887643    2 3569999


Q ss_pred             EccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---hhhccC----Cc---
Q 046297          209 VGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---ELLVGK----DD---  271 (331)
Q Consensus       209 ~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~~~~~~----~~---  271 (331)
                      +||..+......     ...|+.+|..++.+.+       ..|+++++|+||++.++.....   ......    ..   
T Consensus       176 isS~~~~~~~~~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  250 (299)
T 3t7c_A          176 TSSIGGLRGAEN-----IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDF  250 (299)
T ss_dssp             ECCGGGTSCCTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             ECChhhccCCCC-----cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHH
Confidence            999887544322     2569999999887765       3589999999999998754211   111000    00   


Q ss_pred             -----cccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          272 -----ELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       272 -----~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                           ........+.+++|+|++++.++.++.  ..|+++++.+
T Consensus       251 ~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  294 (299)
T 3t7c_A          251 QVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDG  294 (299)
T ss_dssp             HHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence                 000111346799999999999997654  4689999987

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.88  E-value=4.3e-22  Score=178.80  Aligned_cols=203  Identities=16%  Similarity=0.166  Sum_probs=143.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|++++.+++       ...+.++.+|++|.+++.++++     
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            355789999999999999999999999  99999999998765442       2357899999999999988876     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~~v~~SS~~~~~~~~  219 (331)
                        ++|+||||||.....  .+.....+++       ...+++|+.++.++++++.    +.+ ..+||++||..+..+..
T Consensus       106 ~g~id~lvnnAg~~~~~--~~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  176 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAG--PLAQMNHDDW-------RWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA  176 (301)
T ss_dssp             HSSCSEEEECCCCCCCB--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT
T ss_pred             CCCCCEEEECCCcCCCC--CcccCCHHHH-------HHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC
Confidence              799999999975321  1111111222       3344889999888888763    444 56999999988754432


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC-------Cccc---cCCcccccC
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK-------DDEL---LQTETRTIA  282 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~-------~~~~---~~~~~~~i~  282 (331)
                      .     ...|+.+|...+.+.+       ..|+++++++||++.++...........       ....   ......+++
T Consensus       177 ~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (301)
T 3tjr_A          177 G-----LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVS  251 (301)
T ss_dssp             T-----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCC
T ss_pred             C-----chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCC
Confidence            2     2579999999887655       3589999999999987643211111000       0000   012245789


Q ss_pred             HHHHHHHHHHHhcCc
Q 046297          283 RADVAEVCIQALQFE  297 (331)
Q Consensus       283 v~Dva~~~~~~l~~~  297 (331)
                      ++|+|++++.+++.+
T Consensus       252 pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          252 ADDVARLTADAILAN  266 (301)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999999875

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.88  E-value=1.7e-22  Score=175.99  Aligned_cols=207  Identities=13%  Similarity=0.050  Sum_probs=150.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHh-cCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-----CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKE-RSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-----GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~-~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~  154 (331)
                      .+++||||||+|+||++++++|++ .  |++|++++|+++..   ...+.++++|++|++++.++++     ++|+||||
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~--g~~v~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNK--NHTVINIDIQQSFS---AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTST--TEEEEEEESSCCCC---CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcC--CcEEEEeccccccc---cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            467899999999999999999999 6  99999999986521   1346889999999999998886     78999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC--CeEEEEccCCCCCCCCCCCCCCcchHHHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA--KQIVLVGSMGGTNLNHPLNSLGNGNILVW  232 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--k~~v~~SS~~~~~~~~~~~~~~~~~y~~s  232 (331)
                      ||.....  .+.....++++.       .+++|+.++..+++++...-.  .+||++||..+.....+     ...|..+
T Consensus        78 Ag~~~~~--~~~~~~~~~~~~-------~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----~~~Y~as  143 (244)
T 4e4y_A           78 AGILIKG--SIFDIDIESIKK-------VLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN-----SFAYTLS  143 (244)
T ss_dssp             CCCCCCB--CTTTSCHHHHHH-------HHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT-----BHHHHHH
T ss_pred             CccCCCC--CcccCCHHHHHH-------HHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC-----CchhHHH
Confidence            9975431  111222222333       348999999999998876522  48999999877544322     2569999


Q ss_pred             HHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-h------------hhccCCccccCCcccccCHHHHHHHHHH
Q 046297          233 KRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-E------------LLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       233 K~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~------------~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      |...+.+.+       ..|+++++++||++.++..... .            .........+  ...+.+++|+|++++.
T Consensus       144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~p~dvA~~v~~  221 (244)
T 4e4y_A          144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFP--LNRIAQPQEIAELVIF  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTST--TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCC--CCCCcCHHHHHHHHHH
Confidence            999987765       4689999999999987642210 0            0000000111  1346799999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.  ..|+.+++.+
T Consensus       222 l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          222 LLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhcCccccccCCeEeECC
Confidence            997654  4688999987

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.88  E-value=7.8e-22  Score=175.55  Aligned_cols=214  Identities=16%  Similarity=0.133  Sum_probs=151.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh-------cCCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK-------IGGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|+.++ .+.       ...++.++.+|++|++++.++++     
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999  9999999998653 221       13457889999999998887764     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~  222 (331)
                        ++|+||||||.....  .+.....+++       ...+++|+.++.++++++...  +.++||++||..+.....+  
T Consensus       105 ~g~iD~lv~~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--  173 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFG--HVKDVTPEEF-------DRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP--  173 (283)
T ss_dssp             HSCCCEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS--
T ss_pred             cCCCCEEEECCCcCCCC--CcccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC--
Confidence              689999999974321  0111111222       233489999999999999876  6679999999876443221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccC---Cc----cc----cCCcccccC
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGK---DD----EL----LQTETRTIA  282 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~---~~----~~----~~~~~~~i~  282 (331)
                        ....|+.+|...+.+.+       ..|+++++|+||++.++.....  ......   ..    .+    ......+.+
T Consensus       174 --~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  251 (283)
T 1g0o_A          174 --KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGL  251 (283)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBC
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcC
Confidence              12579999999887765       3589999999999988642110  000000   00    00    000123678


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++|+|++++.++.++.  ..|+++++.+
T Consensus       252 p~dvA~~v~~l~s~~~~~itG~~i~vdg  279 (283)
T 1g0o_A          252 PIDIARVVCFLASNDGGWVTGKVIGIDG  279 (283)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            9999999999997653  4688999987

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.88  E-value=2e-22  Score=179.08  Aligned_cols=224  Identities=13%  Similarity=0.098  Sum_probs=154.8

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc------CC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ------GI  148 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~------~~  148 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+.++.++    +...+.++++|++|.+++.++++      ++
T Consensus        27 ~l~~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i  104 (281)
T 3ppi_A           27 QFEGASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRL  104 (281)
T ss_dssp             GGTTEEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            345788999999999999999999999  9999999999876544    34568899999999999988876      58


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----------cCCCeEEEEccCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----------AGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----------~~vk~~v~~SS~~~~~~~  218 (331)
                      |+||||++.........+...   .+...++....+++|+.++.++++++..          .+-.+||++||..+....
T Consensus       105 d~lv~~aag~~~~~~~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  181 (281)
T 3ppi_A          105 RYAVVAHGGFGVAQRIVQRDG---SPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ  181 (281)
T ss_dssp             EEEEECCCCCCCCCCSBCTTS---CBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC
T ss_pred             CeEEEccCccccccccccccc---ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC
Confidence            999999543322111000000   0111111233348899998888887653          234589999999876543


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      ..     ...|+.+|...+.+.+       ..++++++++||++.++....  ...........+ ....+.+++|+|++
T Consensus       182 ~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~  255 (281)
T 3ppi_A          182 IG-----QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIP-FPKRLGTPDEFADA  255 (281)
T ss_dssp             TT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCC-SSSSCBCHHHHHHH
T ss_pred             CC-----CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCC-CCCCCCCHHHHHHH
Confidence            32     2579999998887655       358999999999997753210  000000000001 11346899999999


Q ss_pred             HHHHhcCcccCCceEEeccCCCCCCCC
Q 046297          290 CIQALQFEEAKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       290 ~~~~l~~~~~~~~~~~i~~~~~~~~~t  316 (331)
                      ++.++.++...|+++++.+   |..++
T Consensus       256 v~~l~s~~~~tG~~i~vdG---G~~~~  279 (281)
T 3ppi_A          256 AAFLLTNGYINGEVMRLDG---AQRFT  279 (281)
T ss_dssp             HHHHHHCSSCCSCEEEEST---TCCCC
T ss_pred             HHHHHcCCCcCCcEEEECC---CcccC
Confidence            9999987667899999998   76554

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.88  E-value=3.5e-22  Score=174.80  Aligned_cols=201  Identities=16%  Similarity=0.057  Sum_probs=135.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++.+|++|++++.++++      
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA   82 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence            34688999999999999999999999  99999999998765542       2347899999999999988886      


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||.....  .+.....++++       ..+++|+.++..+++++    ++.+..+||++||..+......  
T Consensus        83 ~id~lv~nAg~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  151 (252)
T 3h7a_A           83 PLEVTIFNVGANVNF--PILETTDRVFR-------KVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG--  151 (252)
T ss_dssp             CEEEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT--
T ss_pred             CceEEEECCCcCCCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC--
Confidence            689999999975421  11111222222       33488988887776665    5556679999999877543322  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCE-EEEecCcccCCCcchhhhhccCCccc-cCCcccccCHHHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPY-TIIRAGGLQDKEGGIRELLVGKDDEL-LQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~-~ilrp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~  293 (331)
                         ...|+.+|...+.+.+       ..|+++ ++++||++.++.....  ........ ......+.+++|+|++++.+
T Consensus       152 ---~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~pedvA~~~~~l  226 (252)
T 3h7a_A          152 ---FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER--REQMFGKDALANPDLLMPPAAVAGAYWQL  226 (252)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CCHHHHHHHHHHH
T ss_pred             ---CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc--chhhhhhhhhcCCccCCCHHHHHHHHHHH
Confidence               2569999999887665       358999 8999999987643211  00000000 01122378999999999999


Q ss_pred             hcCcc
Q 046297          294 LQFEE  298 (331)
Q Consensus       294 l~~~~  298 (331)
                      +..+.
T Consensus       227 ~s~~~  231 (252)
T 3h7a_A          227 YQQPK  231 (252)
T ss_dssp             HHCCG
T ss_pred             HhCch
Confidence            98664

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.88  E-value=6.5e-22  Score=173.81  Aligned_cols=220  Identities=15%  Similarity=0.113  Sum_probs=148.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|+++.+ +.+..+.       ....+.++.+|++|++++.++++    
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999  999999855 4433222       23458899999999999988876    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC--CeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA--KQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--k~~v~~SS~~~~~~~~~~  221 (331)
                         ++|+||||||...... .+.....++++       ..+++|+.++.++++++...-.  .+||++||..+.....+ 
T Consensus        83 ~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~-------~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  153 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARK-TIAEMDEAFWH-------QVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP-  153 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCC-CTTTCCHHHHH-------HHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST-
T ss_pred             HhCCCCEEEECCCccCCCC-ChhhCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC-
Confidence               7899999999642211 11111222222       3348999999999999876533  38999999876422111 


Q ss_pred             CCCCcchHHHHHHHHHHHHH----h--cCCCEEEEecCcccCCCcchhhhhccCCccccC--CcccccCHHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA----D--SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQ--TETRTIARADVAEVCIQA  293 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~----~--~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~  293 (331)
                         ....|+.+|...+.+.+    +  .++++++++||++.++....... ......+..  ....+.+++|+|++++.+
T Consensus       154 ---~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~v~~L  229 (259)
T 3edm_A          154 ---GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDVAGLVAFL  229 (259)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHH
T ss_pred             ---CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence               12569999999987765    2  24899999999998764321100 000000000  113457899999999999


Q ss_pred             hcCcc--cCCceEEeccCCCCCCCC
Q 046297          294 LQFEE--AKFKAFDLASKPEGTGTP  316 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~~~~~~~~t  316 (331)
                      +..+.  ..|+.|++.+   |....
T Consensus       230 ~s~~~~~itG~~i~vdG---g~~~~  251 (259)
T 3edm_A          230 ASDDAAYVTGACYDING---GVLFS  251 (259)
T ss_dssp             HSGGGTTCCSCEEEESB---CSSBC
T ss_pred             cCccccCccCCEEEECC---CcCCC
Confidence            87654  4689999997   55443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.88  E-value=1.5e-21  Score=168.80  Aligned_cols=203  Identities=16%  Similarity=0.137  Sum_probs=145.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++||||||+|+||++++++|+++  |++|++++|+.++.+++        ...+.++.+|++|++++.++++       
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARD--GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999  99999999997654432        3457889999999999998886       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH---cCCCeEEEEccCCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA---AGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      ++|+||||||.....  .+.....++++       ..+++|+.++.++++++..   .+..++|++||..+......   
T Consensus        80 ~id~li~~Ag~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---  147 (235)
T 3l77_A           80 DVDVVVANAGLGYFK--RLEELSEEEFH-------EMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPY---  147 (235)
T ss_dssp             SCSEEEECCCCCCCC--CTTTSCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTT---
T ss_pred             CCCEEEECCcccccc--CcccCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCC---
Confidence            789999999974321  11112222233       3348999999888887753   23457778887765433211   


Q ss_pred             CCcchHHHHHHHHHHHHHh-----cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          224 LGNGNILVWKRKAEQYLAD-----SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~~-----~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                        ...|..+|...+.+.+.     .++++++++||++..+.....   ...     .....+.+++|+|++++.++..+.
T Consensus       148 --~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~---~~~-----~~~~~~~~p~dva~~v~~l~~~~~  217 (235)
T 3l77_A          148 --GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK---PGK-----PKEKGYLKPDEIAEAVRCLLKLPK  217 (235)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC---SCC-----CGGGTCBCHHHHHHHHHHHHTSCT
T ss_pred             --cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc---CCc-----ccccCCCCHHHHHHHHHHHHcCCC
Confidence              25699999999877663     589999999999987643210   111     111256899999999999998875


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..+++.....
T Consensus       218 ~~~~~~~~~~~~  229 (235)
T 3l77_A          218 DVRVEELMLRSV  229 (235)
T ss_dssp             TCCCCEEEECCT
T ss_pred             CCccceEEEeec
Confidence              3455444444

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.88  E-value=4e-22  Score=174.75  Aligned_cols=203  Identities=14%  Similarity=0.137  Sum_probs=139.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcC----CCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQG----IDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~----~d~Vi~~ag~  157 (331)
                      +++||||||+|+||++++++|+++  |++|++++|++++.+.     . +.+|++|++++.+++++    +|+||||||.
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~-----~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~   72 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVIA-----D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGL   72 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC-----C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhhcc-----c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence            367999999999999999999999  9999999998765432     1 67899999999988864    5999999996


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCC--C-----------
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNH--P-----------  220 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~--~-----------  220 (331)
                      ....         ..++..+       ++|+.++.++++++.    +.+.++||++||..++....  +           
T Consensus        73 ~~~~---------~~~~~~~-------~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  136 (257)
T 1fjh_A           73 GPQT---------KVLGNVV-------SVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             CTTC---------SSHHHHH-------HHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             CCCc---------ccHHHHH-------HHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccch
Confidence            4311         1233344       889999888888775    45678999999987652100  0           


Q ss_pred             ----------CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccC-CccccCCcccc
Q 046297          221 ----------LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGK-DDELLQTETRT  280 (331)
Q Consensus       221 ----------~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~-~~~~~~~~~~~  280 (331)
                                ........|+.+|...+.+.+       ..++++++|+||++.++.....  ...... ...+......+
T Consensus       137 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (257)
T 1fjh_A          137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSC
T ss_pred             hhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCC
Confidence                      000122579999999887765       3689999999999988753211  000000 00000011246


Q ss_pred             cCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          281 IARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .+++|+|++++.++..+.  ..|+.+++.+
T Consensus       217 ~~~~dvA~~~~~l~~~~~~~~tG~~~~vdg  246 (257)
T 1fjh_A          217 AEPSEMASVIAFLMSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCEEEECC
Confidence            899999999999998753  4688999987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.88  E-value=3.6e-21  Score=170.17  Aligned_cols=210  Identities=18%  Similarity=0.150  Sum_probs=150.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|++++|+.. ..+.       ....+.++.+|++|++++.++++    
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999  999999977642 2222       23457899999999999888876    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~  221 (331)
                         ++|+||||||.....  .+.....++++       ..+++|+.++..+++++...  +..+||++||..+.....+ 
T Consensus       106 ~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~-  175 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSA--PLEETTVADFD-------EVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWP-  175 (271)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCST-
T ss_pred             HcCCCcEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCC-
Confidence               799999999975321  11112222233       33489999999999998765  3469999999754332111 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                         ....|+.+|...+.+.+       ..|+++++|+||++.++....    ......   ..+  ...+.+++|+|+++
T Consensus       176 ---~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~---~~~--~~r~~~pedvA~~v  247 (271)
T 3v2g_A          176 ---GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRE---RIA--TGSYGEPQDIAGLV  247 (271)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHH---TCT--TSSCBCHHHHHHHH
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHh---cCC--CCCCCCHHHHHHHH
Confidence               12579999999887765       358999999999998875321    000000   011  12357899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++....  ..|+++++.+
T Consensus       248 ~fL~s~~~~~itG~~i~vdG  267 (271)
T 3v2g_A          248 AWLAGPQGKFVTGASLTIDG  267 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCcccCCccCCEEEeCc
Confidence            99987543  5689999987

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.87  E-value=7.1e-23  Score=180.55  Aligned_cols=217  Identities=12%  Similarity=0.086  Sum_probs=151.6

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCC---chhhhc---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTE---ESKQKI---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~---~~~~~l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+  |+||++++++|+++  |++|++++|++   +..+++   .+...++++|++|++++.++++     
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            346789999999  99999999999999  99999999987   222222   1235789999999999888876     


Q ss_pred             --CCCEEEEcccCCCCC--CCCCCC-CCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKM--KPDFDP-AKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~--~~~~~~-~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~~  219 (331)
                        ++|+||||||.....  ...+.. ...+++       ...+++|+.++.++++++...-  -++||++||..+..+..
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  157 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGF-------KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP  157 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHH-------HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC
Confidence              689999999974320  000000 111222       2334899999999999987652  24899999987654332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      +     ...|+.+|...+.+.+       ..++++++++||++.++.....    ..........+  ...+.+++|+|+
T Consensus       158 ~-----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~dva~  230 (265)
T 1qsg_A          158 N-----YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP--IRRTVTIEDVGN  230 (265)
T ss_dssp             T-----TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST--TSSCCCHHHHHH
T ss_pred             C-----chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCC--CCCCCCHHHHHH
Confidence            2     1469999999987765       2489999999999998753210    00000000001  123679999999


Q ss_pred             HHHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          289 VCIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +++.++.++.  ..|+.|++.+   |...
T Consensus       231 ~v~~l~s~~~~~~tG~~~~vdg---G~~~  256 (265)
T 1qsg_A          231 SAAFLCSDLSAGISGEVVHVDG---GFSI  256 (265)
T ss_dssp             HHHHHTSGGGTTCCSCEEEEST---TGGG
T ss_pred             HHHHHhCchhcCccCCEEEECC---CcCC
Confidence            9999987643  3588999987   6443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.87  E-value=9.1e-22  Score=171.29  Aligned_cols=214  Identities=18%  Similarity=0.122  Sum_probs=151.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.++|++|||||+++||+++++.|+++  |++|++++|++++.++.       ..++.++++|++|+++++++++     
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346889999999999999999999999  99999999998765442       3457889999999999988775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||...... .+...+.++|+..       +++|+.++..+.++    +++.+-.+||++||..+......
T Consensus        82 ~G~iDiLVNNAGi~~~~~-~~~~~~~e~~~~~-------~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~  153 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVT-PVAEVSDELWERV-------LAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA  153 (254)
T ss_dssp             HSCCCEEEECCCCCCTTC-CGGGCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSS
T ss_pred             cCCCCEEEECCcccCCCC-ChhhCCHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCC
Confidence              6899999999754322 1222233333443       48898886655554    55666679999999987543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----h-hhccCCccccCCcccccCHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----E-LLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~-~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                           ...|..+|..+..+.+       .+|++++.|.||++..+.....    . .........+ -...+-.++|+|.
T Consensus       154 -----~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~R~g~pediA~  227 (254)
T 4fn4_A          154 -----GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS-LSSRLAEPEDIAN  227 (254)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT-TCCCCBCHHHHHH
T ss_pred             -----ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC-CCCCCcCHHHHHH
Confidence                 2569999999887665       4799999999999977642100    0 0000000000 0023467899999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.+..  ..|+++.+.+
T Consensus       228 ~v~fLaSd~a~~iTG~~i~VDG  249 (254)
T 4fn4_A          228 VIVFLASDEASFVNGDAVVVDG  249 (254)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhcCCcCCEEEeCC
Confidence            9999887654  4688898886

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.87  E-value=3.1e-21  Score=170.55  Aligned_cols=215  Identities=17%  Similarity=0.109  Sum_probs=150.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|++++|+... .+.       ...++.++++|++|++++.++++    
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            445789999999999999999999999  9999998876432 222       23458899999999999888875    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC--CeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA--KQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--k~~v~~SS~~~~~~~~~~  221 (331)
                         ++|+||||||.....  .+.....++++       ..+++|+.++.++++++...-.  .+||++||..+.....+ 
T Consensus        93 ~~g~id~lvnnAg~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  162 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFG--HLKDVTEEEFD-------RVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVP-  162 (270)
T ss_dssp             HHSCCCEEECCCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCT-
T ss_pred             HcCCCCEEEECCCCCCCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCC-
Confidence               689999999975321  11112222233       3348999999999999887643  39999999763222211 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhccC-----Cccc---c---CCcccccC
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVGK-----DDEL---L---QTETRTIA  282 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~~-----~~~~---~---~~~~~~i~  282 (331)
                         ....|+.+|...+.+.+       ..|++++.|+||++.++..... ......     ....   .   .....+.+
T Consensus       163 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  239 (270)
T 3is3_A          163 ---KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGW  239 (270)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBC
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCC
Confidence               12569999999887765       3689999999999988753210 000000     0000   0   01123578


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++|+|++++.++....  ..|+++++.+
T Consensus       240 p~dvA~~v~~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          240 PQDVANVVGFLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence            9999999999987653  4688999987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.87  E-value=5.3e-22  Score=171.88  Aligned_cols=192  Identities=14%  Similarity=0.070  Sum_probs=138.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|++++.+++    ..++.++.+|++|++++.++++       ++|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            4678999999999999999999999  99999999998765543    2357889999999999888775       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +||||||.....  .+.....++++.       .+++|+.++..+++++..    .+ .+||++||..+......     
T Consensus        80 ~lvnnAg~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~-----  144 (235)
T 3l6e_A           80 LVLHCAGTGEFG--PVGVYTAEQIRR-------VMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKAN-----  144 (235)
T ss_dssp             EEEEECCCC--------CCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSS-----
T ss_pred             EEEECCCCCCCC--ChHhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCC-----
Confidence            999999974321  111122222333       348999999888877743    23 39999999876543322     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      ...|+.+|...+.+.+       ..|++++.++||++..+.......         .....+.+++|+|++++.++..+.
T Consensus       145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH---------VDPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC---------CCCcCCCCHHHHHHHHHHHHhCCC
Confidence            2569999999987765       358999999999997764321100         011256899999999999998654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.87  E-value=8.4e-22  Score=173.38  Aligned_cols=199  Identities=17%  Similarity=0.147  Sum_probs=140.4

Q ss_pred             hccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc---
Q 046297           77 VLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        77 ~~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +.++.+++||||||+|+||++++++|+++  |++|++++|+.++.+.+       ...+.++.+|++|++++.++++   
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence            45566789999999999999999999999  99999999998765442       2347899999999999888775   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||....... +.....+++       ...+++|+.++.++++++    ++.+.++||++||..+..+.
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~-~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  173 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGP-LHTMKPAEW-------DALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV  173 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSC-GGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC
T ss_pred             HhcCCCCEEEECCCccCCCCC-cccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC
Confidence                58999999997322110 111111122       234488999988877765    44677899999999876543


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                      .+     ...|+.+|...+.+.+       ..++++++++||++..+.....   ..   .  .....+++++|+|++++
T Consensus       174 ~~-----~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~---~--~~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          174 AD-----GAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL---SA---K--KSALGAIEPDDIADVVA  240 (262)
T ss_dssp             TT-----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------CCCHHHHHHHHH
T ss_pred             CC-----CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc---cc---c--cccccCCCHHHHHHHHH
Confidence            32     2569999999887665       3689999999999987643211   00   0  11234679999999999


Q ss_pred             HHhcCcc
Q 046297          292 QALQFEE  298 (331)
Q Consensus       292 ~~l~~~~  298 (331)
                      .++..+.
T Consensus       241 ~l~s~~~  247 (262)
T 3rkr_A          241 LLATQAD  247 (262)
T ss_dssp             HHHTCCT
T ss_pred             HHhcCcc
Confidence            9998754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.87  E-value=1.2e-21  Score=172.73  Aligned_cols=210  Identities=12%  Similarity=0.041  Sum_probs=151.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CC-CCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GG-ADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~-~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|++++|++++.++.        .. ++.++.+|++|++++.++++   
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999  99999999997654432        12 37889999999998887775   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||.....  .+.....++++.       .+++|+.++..+++++..    .+..+||++||..+..+.
T Consensus        83 ~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVS--TFAETTDEAWSE-------ELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE  153 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCB--CTTTCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC
T ss_pred             HHcCCCCEEEECCCCCCCC--CcccCCHHHHHH-------HHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC
Confidence                689999999974321  111222223333       348999999888888743    445689999998775433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCC----------------ccccC
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKD----------------DELLQ  275 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~----------------~~~~~  275 (331)
                      ..     ...|..+|...+.+.+       ..|+++++|+||++.++....  ......                ...+ 
T Consensus       154 ~~-----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p-  225 (265)
T 3lf2_A          154 PH-----MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRR--RFEAREERELDWAQWTAQLARNKQIP-  225 (265)
T ss_dssp             TT-----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--HHTC------CHHHHHHHHHHHTTCT-
T ss_pred             CC-----chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhh--hhhhhhhhccCHHHHHHHHhhccCCC-
Confidence            22     2579999999887765       358999999999998763211  100000                0011 


Q ss_pred             CcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          276 TETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       276 ~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                       ...+.+++|+|++++.++.+..  ..|+++++.+
T Consensus       226 -~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  259 (265)
T 3lf2_A          226 -LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSG  259 (265)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred             -cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence             1235789999999999987643  5688999987

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.87  E-value=1.1e-21  Score=177.42  Aligned_cols=216  Identities=14%  Similarity=0.092  Sum_probs=151.4

Q ss_pred             hccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC------------chhhh-------cCCCCcEEEccCCC
Q 046297           77 VLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE------------ESKQK-------IGGADDLFIGDIRD  137 (331)
Q Consensus        77 ~~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~------------~~~~~-------l~~~~~~v~~Dl~d  137 (331)
                      +....+++||||||+|+||+++++.|+++  |++|++++|+.            ++.++       ....+.++.+|++|
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d  118 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD  118 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            34456789999999999999999999999  99999998862            22211       23357889999999


Q ss_pred             cccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcC-CCe
Q 046297          138 SNSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAG-AKQ  205 (331)
Q Consensus       138 ~~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-vk~  205 (331)
                      ++++.++++       ++|+||||||......  +.....++++.       .+++|+.++..+++++.    +.+ -.+
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~--~~~~~~~~~~~-------~~~vN~~g~~~l~~~~~~~m~~~~~~g~  189 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQGE--VVSLTDQQWSD-------ILQTNLIGAWHACRAVLPSMIERGQGGS  189 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC--TTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHTCSCEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--cccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHHcCCCCE
Confidence            999888876       7999999999754321  11222222333       34889999888877764    333 458


Q ss_pred             EEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhcc----CCc
Q 046297          206 IVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVG----KDD  271 (331)
Q Consensus       206 ~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~----~~~  271 (331)
                      ||++||..+......     ...|+.+|..++.+.+       ..|+++++|+||++.++....   ...+..    ...
T Consensus       190 Iv~isS~~~~~~~~~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  264 (317)
T 3oec_A          190 VIFVSSTVGLRGAPG-----QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTR  264 (317)
T ss_dssp             EEEECCGGGSSCCTT-----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCH
T ss_pred             EEEECcHHhcCCCCC-----CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccch
Confidence            999999877543322     2579999999887765       358999999999998864211   011100    000


Q ss_pred             --------cccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          272 --------ELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       272 --------~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                              ........+++++|+|++++.++....  ..|+++++.+
T Consensus       265 ~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG  311 (317)
T 3oec_A          265 EDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG  311 (317)
T ss_dssp             HHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence                    001112567899999999999887653  4689999987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.87  E-value=1.8e-21  Score=173.42  Aligned_cols=214  Identities=12%  Similarity=0.090  Sum_probs=150.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC----------------chhhh-------cCCCCcEEEccCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE----------------ESKQK-------IGGADDLFIGDIR  136 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~----------------~~~~~-------l~~~~~~v~~Dl~  136 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++                ++.++       ....+.++++|++
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            45789999999999999999999999  99999999872                22221       1235788999999


Q ss_pred             CcccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cC-CC
Q 046297          137 DSNSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AG-AK  204 (331)
Q Consensus       137 d~~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-vk  204 (331)
                      |++++.++++       ++|+||||||...... .+.....++++       ..+++|+.++.++++++..    .+ -.
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~~g  158 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGD-TLDKTSEEDWT-------EMIDINLAGVWKTVKAGVPHMIAGGRGG  158 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCS-CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCC-ccccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhCCCCc
Confidence            9999988875       7999999999744321 01111222222       3348999998888877643    33 45


Q ss_pred             eEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---hhhcc----CC
Q 046297          205 QIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---ELLVG----KD  270 (331)
Q Consensus       205 ~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~~~~~----~~  270 (331)
                      +||++||..+......     ...|+.+|...+.+.+       ..++++++|+||++.++.....   .....    ..
T Consensus       159 ~iv~isS~~~~~~~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  233 (286)
T 3uve_A          159 SIILTSSVGGLKAYPH-----TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPG  233 (286)
T ss_dssp             EEEEECCGGGTSCCTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred             EEEEECchhhccCCCC-----ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccc
Confidence            8999999887544322     2569999999887765       3689999999999998754211   11100    00


Q ss_pred             c--------cccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          271 D--------ELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       271 ~--------~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .        ........+.+++|+|++++.++.+..  ..|+++++.+
T Consensus       234 ~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  281 (286)
T 3uve_A          234 PDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA  281 (286)
T ss_dssp             HHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence            0        000111456899999999999987653  4689999987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.87  E-value=7.8e-22  Score=175.73  Aligned_cols=213  Identities=13%  Similarity=0.038  Sum_probs=149.8

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCc---hhhhc---CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEE---SKQKI---GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~---~~~~l---~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+  |+||+++++.|+++  |++|++++|+++   ..+++   .+.+.++.+|++|++++.++++     
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456889999999  99999999999999  999999999874   22222   1347899999999999888775     


Q ss_pred             --CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC---CCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG---AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~---vk~~v~~SS~~~~~~~~  219 (331)
                        ++|+||||||.....  ...+.....+++       ...+++|+.++.++++++...-   -++||++||..+..+..
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~  169 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGF-------KIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP  169 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHH-------HHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC
Confidence              689999999974320  000111111222       2334889999999999987653   26999999987654332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      +     ...|+.+|...+.+.+       ..|+++++|+||++.++....    ...........+  ...+.+++|+|+
T Consensus       170 ~-----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~dva~  242 (285)
T 2p91_A          170 H-----YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNP--FGKPITIEDVGD  242 (285)
T ss_dssp             T-----TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHST--TSSCCCHHHHHH
T ss_pred             C-----ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCC--CCCCcCHHHHHH
Confidence            2     1469999999887665       358999999999999875321    010000000011  123578999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++..+.  ..|+.|++.+
T Consensus       243 ~~~~l~s~~~~~~tG~~~~vdg  264 (285)
T 2p91_A          243 TAVFLCSDWARAITGEVVHVDN  264 (285)
T ss_dssp             HHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHcCCcccCCCCCEEEECC
Confidence            9999987543  3588899987

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.87  E-value=5.2e-22  Score=173.94  Aligned_cols=213  Identities=14%  Similarity=0.150  Sum_probs=148.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      ++++|||||+|+||++++++|++++.|+.|++++|++++.+++    ..++.++.+|++|++++.++++       ++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            4789999999999999999999984457899999988765543    3458899999999999888875       7899


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      ||||||...... .+...+.++++.       .+++|+.++..+++++    ++.+ .+||++||..+.....+     .
T Consensus        82 lvnnAg~~~~~~-~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~-----~  147 (254)
T 3kzv_A           82 LVANAGVLEPVQ-NVNEIDVNAWKK-------LYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSS-----W  147 (254)
T ss_dssp             EEEECCCCCCCT-TTTSCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCC-----S
T ss_pred             EEECCcccCCCC-CcccCCHHHHHH-------HHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCC-----c
Confidence            999999743311 111222222333       3488999988888776    5556 79999999887544322     2


Q ss_pred             chHHHHHHHHHHHHH----h-cCCCEEEEecCcccCCCcchhhhhcc---CCccc---c---CCcccccCHHHHHHHHHH
Q 046297          227 GNILVWKRKAEQYLA----D-SGIPYTIIRAGGLQDKEGGIRELLVG---KDDEL---L---QTETRTIARADVAEVCIQ  292 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~----~-~~~~~~ilrp~~v~g~~~~~~~~~~~---~~~~~---~---~~~~~~i~v~Dva~~~~~  292 (331)
                      ..|+.+|...+.+.+    + .++++++++||++.++..........   .....   .   .....+.+++|+|++++.
T Consensus       148 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~  227 (254)
T 3kzv_A          148 GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAK  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHH
Confidence            579999999987765    2 48999999999998875321000000   00000   0   011346789999999999


Q ss_pred             HhcCcc---cCCceEEecc
Q 046297          293 ALQFEE---AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~---~~~~~~~i~~  308 (331)
                      ++.++.   ..|+.+++.+
T Consensus       228 L~s~~~~~~itG~~i~vdg  246 (254)
T 3kzv_A          228 LALHGIPDGVNGQYLSYND  246 (254)
T ss_dssp             HHHHCCCGGGTTCEEETTC
T ss_pred             HHhhcccCCCCccEEEecC
Confidence            987652   5788998886

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.87  E-value=1.8e-21  Score=176.75  Aligned_cols=219  Identities=15%  Similarity=0.024  Sum_probs=149.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe-cCCchhhhc--------CCCCcEEEccCCCcc-----------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV-RTEESKQKI--------GGADDLFIGDIRDSN-----------  139 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~-R~~~~~~~l--------~~~~~~v~~Dl~d~~-----------  139 (331)
                      +.+++||||||+|+||+++++.|+++  |++|++++ |++++.+++        ..++.++.+|++|++           
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence            45689999999999999999999999  99999999 887654332        235788999999999           


Q ss_pred             ------cHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCC-------CCCccccccCCCcceehHHHHHHHHHHHH
Q 046297          140 ------SIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKG-------GRPEFYFEEGAYPEQVDWIGQKNQIDAAK  199 (331)
Q Consensus       140 ------~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~-------~~p~~~~~~~~~~~~~nv~~~~~ll~aa~  199 (331)
                            ++.++++       ++|+||||||.....  .+.....       ..++...++....+++|+.++..+++++.
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~--~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  199 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPT--PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  199 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--CSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC--ChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  8887775       799999999975321  1111110       00000011122344889999888777664


Q ss_pred             ----HcC------CCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch
Q 046297          200 ----AAG------AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI  262 (331)
Q Consensus       200 ----~~~------vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~  262 (331)
                          +.+      .++||++||..+..+..+     ...|..+|..++.+.+       ..++++++|+||++.++....
T Consensus       200 ~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~-----~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  274 (328)
T 2qhx_A          200 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLG-----YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP  274 (328)
T ss_dssp             HHHHHSCGGGSCSCEEEEEECCTTTTSCCTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCCCSC
T ss_pred             HHHHhcCCcCCCCCcEEEEECchhhccCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCcccc
Confidence                445      679999999887543322     2569999999887765       358999999999998876211


Q ss_pred             hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          263 RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ...........+- +..+.+++|+|++++.++..+.  ..|+++++.+
T Consensus       275 ~~~~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  321 (328)
T 2qhx_A          275 PAVWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  321 (328)
T ss_dssp             HHHHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhhCCC-CCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            1111000000111 1146789999999999997543  4688999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.87  E-value=3.3e-21  Score=170.99  Aligned_cols=213  Identities=12%  Similarity=0.105  Sum_probs=150.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-------------Cchhhh-------cCCCCcEEEccCCCcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-------------EESKQK-------IGGADDLFIGDIRDSN  139 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-------------~~~~~~-------l~~~~~~v~~Dl~d~~  139 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|+             .++.++       ....+.++.+|++|++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            45789999999999999999999999  9999999983             222221       1345788999999999


Q ss_pred             cHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC-CCeEE
Q 046297          140 SIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG-AKQIV  207 (331)
Q Consensus       140 ~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-vk~~v  207 (331)
                      ++.++++       ++|+||||||.....  .+...+.++++       ..+++|+.++.++++++    ++.+ -.+||
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv  157 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQ--AWDDITPEDFR-------DVMDINVTGTWNTVMAGAPRIIEGGRGGSII  157 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCC--ChhhCCHHHHH-------HHHHHhHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            9888775       599999999975431  11111222222       33488999988887774    3434 46899


Q ss_pred             EEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh------hhhccCCc--c
Q 046297          208 LVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR------ELLVGKDD--E  272 (331)
Q Consensus       208 ~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~------~~~~~~~~--~  272 (331)
                      ++||..+......     ...|..+|...+.+.+       ..++++++++||++.++.....      ........  .
T Consensus       158 ~isS~~~~~~~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  232 (277)
T 3tsc_A          158 LISSAAGMKMQPF-----MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSH  232 (277)
T ss_dssp             EECCGGGTSCCSS-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTT
T ss_pred             EEccHhhCCCCCC-----chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHH
Confidence            9999887543322     2569999999887765       3589999999999988753210      00000000  0


Q ss_pred             -c-cCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          273 -L-LQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       273 -~-~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                       + ......+.+++|+|++++.++.++.  ..|+++++.+
T Consensus       233 ~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  272 (277)
T 3tsc_A          233 VLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQ  272 (277)
T ss_dssp             TTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCC
Confidence             0 0111246899999999999997654  4688999987

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.87  E-value=1.5e-21  Score=171.97  Aligned_cols=202  Identities=13%  Similarity=0.078  Sum_probs=146.0

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCC---CeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhc---
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQ---YAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g---~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ...+++||||||+|+||++++++|+++  |   ++|++++|+.++.+.+      ..++.++.+|++|++++.++++   
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~--G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNL--PQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTS--SSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhc--CCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            345688999999999999999999999  8   9999999987643322      2358899999999999998886   


Q ss_pred             ------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----------C-----CCe
Q 046297          147 ------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----------G-----AKQ  205 (331)
Q Consensus       147 ------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~-----vk~  205 (331)
                            ++|+||||||...... .+...       ..++....+++|+.++.++++++...          +     .++
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~-~~~~~-------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSA-RITAV-------RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAA  167 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCC-CGGGC-------CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCE
T ss_pred             HhcCCCCccEEEECCCcCCCcc-ccccC-------CHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCce
Confidence                  7999999999754110 00011       11112233488999988888877543          2     478


Q ss_pred             EEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcc
Q 046297          206 IVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTET  278 (331)
Q Consensus       206 ~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~  278 (331)
                      ||++||..+.....+..  ....|+.+|..++.+.+       ..+++++++|||++.++....               .
T Consensus       168 iv~isS~~~~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------~  230 (267)
T 1sny_A          168 IINMSSILGSIQGNTDG--GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---------------S  230 (267)
T ss_dssp             EEEECCGGGCSTTCCSC--CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT---------------T
T ss_pred             EEEEecccccccCCCCC--CchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC---------------C
Confidence            99999987654432211  22569999999987765       258999999999997764311               1


Q ss_pred             cccCHHHHHHHHHHHhcCcc--cCCceEEec
Q 046297          279 RTIARADVAEVCIQALQFEE--AKFKAFDLA  307 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~  307 (331)
                      .+++++|+|+.++.++....  ..|+.|.+.
T Consensus       231 ~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  261 (267)
T 1sny_A          231 APLDVPTSTGQIVQTISKLGEKQNGGFVNYD  261 (267)
T ss_dssp             CSBCHHHHHHHHHHHHHHCCGGGTTCEECTT
T ss_pred             CCCCHHHHHHHHHHHHHhcCcCCCCcEEccC
Confidence            35789999999999997543  456555544

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.87  E-value=2.8e-22  Score=177.02  Aligned_cols=226  Identities=14%  Similarity=0.089  Sum_probs=155.4

Q ss_pred             cCCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCchhhh---c---CCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEESKQK---I---GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~---l---~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ...+++||||||+  |+||++++++|+++  |++|++++|+....+.   +   ...+.++.+|++|++++.++++    
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            4457899999999  99999999999999  9999999998543222   1   2348899999999999988876    


Q ss_pred             ---CCCEEEEcccCCCCC---CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKM---KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~  218 (331)
                         ++|+||||||.....   ....+.....++       ...+++|+.++..+++++...  .-.+||++||..+..+.
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  161 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENF-------RIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI  161 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHH-------HHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHH-------HHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC
Confidence               689999999975431   100000122222       233488999999999988764  23489999998765433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      ..     ...|+.+|...+.+.+       ..++++++++||++.++.....    ..........+  ...+.+++|+|
T Consensus       162 ~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~~pedva  234 (271)
T 3ek2_A          162 PN-----YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSP--LKRNVTIEQVG  234 (271)
T ss_dssp             TT-----TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHST--TSSCCCHHHHH
T ss_pred             CC-----ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCC--cCCCCCHHHHH
Confidence            22     2569999999887665       3589999999999988653211    11000000011  12357899999


Q ss_pred             HHHHHHhcCcc--cCCceEEeccCCCCCCCCHHHHHHH
Q 046297          288 EVCIQALQFEE--AKFKAFDLASKPEGTGTPTKDFKAL  323 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~~~~~~~~t~~e~~~~  323 (331)
                      ++++.++.++.  ..|+++++.+   |...++.++.++
T Consensus       235 ~~i~~l~s~~~~~~tG~~i~vdg---G~~~~~~~~~~~  269 (271)
T 3ek2_A          235 NAGAFLLSDLASGVTAEVMHVDS---GFNAVVGGMAGL  269 (271)
T ss_dssp             HHHHHHHSGGGTTCCSEEEEEST---TGGGBCCCC---
T ss_pred             HHHHHHcCcccCCeeeeEEEECC---Ceeeehhhhhhc
Confidence            99999998643  5789999998   877777666543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.87  E-value=1.5e-21  Score=168.37  Aligned_cols=193  Identities=11%  Similarity=0.048  Sum_probs=136.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhcCC----CEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQGI----DALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~~~----d~Vi~  153 (331)
                      |++||||||+|+||++++++|+++  |++|++++|++++.+++    ..++.++.+|++|++++.++++.+    |+|||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            367999999999999999999999  99999999998765543    456899999999999999998754    99999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC---CCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG---AKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~---vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      |||.....  .+.....+++       ...+++|+.++.++++++...-   -.+||++||..+..+..+     ...|+
T Consensus        79 ~Ag~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----~~~Y~  144 (230)
T 3guy_A           79 SAGSGYFG--LLQEQDPEQI-------QTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQ-----ESTYC  144 (230)
T ss_dssp             CCCCCCCS--CGGGSCHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTT-----CHHHH
T ss_pred             eCCcCCCC--ccccCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCC-----CchhH
Confidence            99964321  1111111222       2334889999999888876542   128999999877544322     25799


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          231 VWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       231 ~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      .+|...+.+.+       ..+++++.++||++..+.....      ....  ....+.+++|+|++++.++..+.
T Consensus       145 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~--~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          145 AVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETS------GKSL--DTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhc------CCCC--CcccCCCHHHHHHHHHHHHhCcC
Confidence            99999887765       2589999999999987642210      0011  12356899999999999998654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.87  E-value=6.9e-22  Score=169.74  Aligned_cols=199  Identities=14%  Similarity=0.087  Sum_probs=144.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc---CCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ---GIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~ag  156 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|+.+             +|++|++++.++++   ++|+||||||
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~g~id~lv~nAg   68 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESE--HTIVHVASRQTG-------------LDISDEKSVYHYFETIGAFDHLIVTAG   68 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCST--TEEEEEESGGGT-------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEecCCcc-------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            34678999999999999999999999  999999999854             89999999988886   7899999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCCCCCCCCCcchHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKR  234 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~  234 (331)
                      ...... .+.....++++.       .+++|+.++..+++++...-  -.+||++||..+.....+     ...|+.+|.
T Consensus        69 ~~~~~~-~~~~~~~~~~~~-------~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----~~~Y~asK~  135 (223)
T 3uce_A           69 SYAPAG-KVVDVEVTQAKY-------AFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN-----TYVKAAINA  135 (223)
T ss_dssp             CCCCCS-CTTTSCHHHHHH-------HHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT-----CHHHHHHHH
T ss_pred             CCCCCC-CcccCCHHHHHh-------hheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC-----chHHHHHHH
Confidence            753221 111222222333       34889999999999987652  248999999876543322     256999999


Q ss_pred             HHHHHHH----hc-CCCEEEEecCcccCCCcch------hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCce
Q 046297          235 KAEQYLA----DS-GIPYTIIRAGGLQDKEGGI------RELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKA  303 (331)
Q Consensus       235 ~~e~~~~----~~-~~~~~ilrp~~v~g~~~~~------~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~  303 (331)
                      ..+.+.+    +. .++++.++||++.++....      ...........+  ...+.+++|+|++++.++..+...|++
T Consensus       136 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dvA~~~~~l~~~~~~tG~~  213 (223)
T 3uce_A          136 AIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP--VGKVGEASDIAMAYLFAIQNSYMTGTV  213 (223)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST--TCSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC--CCCccCHHHHHHHHHHHccCCCCCCcE
Confidence            9887765    22 3999999999998864220      000000000111  134678999999999999866667899


Q ss_pred             EEecc
Q 046297          304 FDLAS  308 (331)
Q Consensus       304 ~~i~~  308 (331)
                      +++.+
T Consensus       214 i~vdg  218 (223)
T 3uce_A          214 IDVDG  218 (223)
T ss_dssp             EEEST
T ss_pred             EEecC
Confidence            99987

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.87  E-value=4.4e-22  Score=176.44  Aligned_cols=214  Identities=14%  Similarity=0.102  Sum_probs=152.7

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc----
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      .+..++++|||||+|+||++++++|+++  |++|++++|++++.+++       ...+.++.+|++|++++.++++    
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999  99999999988665432       3457899999999998888876    


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||......  +.....+++       ...+++|+.++.++++++    ++.+..+||++||..+..+.. 
T Consensus       107 ~g~iD~lvnnAg~~~~~~--~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-  176 (275)
T 4imr_A          107 IAPVDILVINASAQINAT--LSALTPNDL-------AFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS-  176 (275)
T ss_dssp             HSCCCEEEECCCCCCCBC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-
T ss_pred             hCCCCEEEECCCCCCCCC--cccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC-
Confidence              7899999999743211  111112222       233488999988887776    455667999999988755222 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh-----hhccCCccccCCcccccCHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE-----LLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                          ....|+.+|...+.+.+       ..++++++|+||++.++......     ......... .....+..++|+|+
T Consensus       177 ----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~pedvA~  251 (275)
T 4imr_A          177 ----VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTL-NWMGRAGRPEEMVG  251 (275)
T ss_dssp             ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHH-STTCSCBCGGGGHH
T ss_pred             ----CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhc-CccCCCcCHHHHHH
Confidence                22569999999887765       25899999999999876422110     000000000 00123568999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.++.  ..|+++++.+
T Consensus       252 ~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          252 AALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHcCcccCCCCCCEEEeCC
Confidence            9999987653  4688999986

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.87  E-value=1.7e-21  Score=172.09  Aligned_cols=199  Identities=16%  Similarity=0.110  Sum_probs=144.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHh-cCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKE-RSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~-~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++||||||+|+||++++++|++ +  |++|++++|+.++.+.+       ..++.++.+|++|.+++.++++      
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            467899999999999999999999 8  99999999987654332       3458899999999999988886      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCC--C---
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNL--N---  218 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~--~---  218 (331)
                       ++|+||||||......       ...+  ..++....+++|+.++.++++++....  .++||++||..++..  .   
T Consensus        81 g~id~li~~Ag~~~~~~-------~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  151 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVA-------DPTP--FHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSP  151 (276)
T ss_dssp             SSEEEEEECCCCCCCTT-------CCSC--HHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCH
T ss_pred             CCCCEEEECCcccccCC-------Cccc--cHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCCh
Confidence             7999999999743211       0000  011123344899999999999998753  249999999754311  0   


Q ss_pred             -------------------------------CCCCCCCcchHHHHHHHHHHHHH-------h----cCCCEEEEecCccc
Q 046297          219 -------------------------------HPLNSLGNGNILVWKRKAEQYLA-------D----SGIPYTIIRAGGLQ  256 (331)
Q Consensus       219 -------------------------------~~~~~~~~~~y~~sK~~~e~~~~-------~----~~~~~~ilrp~~v~  256 (331)
                                                     .+....+...|+.+|...+.+.+       .    .++++++++||++.
T Consensus       152 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~  231 (276)
T 1wma_A          152 ELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  231 (276)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             hHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccc
Confidence                                           00011122679999999887664       2    58999999999998


Q ss_pred             CCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc----cCCceEE
Q 046297          257 DKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE----AKFKAFD  305 (331)
Q Consensus       257 g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~----~~~~~~~  305 (331)
                      ++....               ..+.+++|+|+.++.++..+.    ..|+.|.
T Consensus       232 t~~~~~---------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          232 TDMAGP---------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             STTTCT---------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             cCcCCc---------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            774321               236899999999999997552    3565554

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.87  E-value=1.4e-21  Score=172.42  Aligned_cols=212  Identities=14%  Similarity=0.087  Sum_probs=148.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ...+++||||||+|+||++++++|+++  |++|+++.+ +.+..++       ...++.++.+|++|++++.++++    
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAAD--GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999  999977664 4433322       13458899999999999888876    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH-----HcCCCeEEEEccCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK-----AAGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~-----~~~vk~~v~~SS~~~~~~~  218 (331)
                         ++|+||||||.....  .+.....+++       ...+++|+.++.++++++.     +.+..+||++||..+....
T Consensus       101 ~~g~id~li~nAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  171 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARDA--AFPALSNDDW-------DAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN  171 (267)
T ss_dssp             HHCCCSEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC
T ss_pred             HhCCccEEEECCCCCCCC--ccccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC
Confidence               799999999975431  1111112222       2334889999988888763     4566799999998764433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhccCCccccCCcccccCHHHHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      .+     ...|+.+|...+.+.+       ..++++++++||++.++..... ..........+  ...+.+++|+|+++
T Consensus       172 ~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p--~~~~~~~edva~~~  244 (267)
T 4iiu_A          172 RG-----QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIP--MKRMGQAEEVAGLA  244 (267)
T ss_dssp             TT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCT--TCSCBCHHHHHHHH
T ss_pred             CC-----CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCC--CCCCcCHHHHHHHH
Confidence            22     2569999998776654       3589999999999988754211 11100000111  13367899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++..+.  ..|+++++.+
T Consensus       245 ~~L~s~~~~~itG~~i~vdG  264 (267)
T 4iiu_A          245 SYLMSDIAGYVTRQVISING  264 (267)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCCcccCccCCEEEeCC
Confidence            99987653  5688999986

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.87  E-value=1.4e-21  Score=170.94  Aligned_cols=199  Identities=13%  Similarity=0.080  Sum_probs=147.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi~~  154 (331)
                      +++||||||+|+||++++++|+++  |++|++++|++++..     ...+.+|++|.+++.++++       ++|+||||
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~-----~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSK--SWNTISIDFRENPNA-----DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTTS-----SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCccccc-----ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            578999999999999999999999  999999999976543     2467899999998888775       46999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCCCCCCCCCcchHHHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLNHPLNSLGNGNILVW  232 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~~~~~~~~~~~y~~s  232 (331)
                      ||....... ...       ...++....+++|+.++.++++++...-  -.+||++||..+..+..+     ...|+.+
T Consensus        95 Ag~~~~~~~-~~~-------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~~Y~~s  161 (251)
T 3orf_A           95 AGGWSGGNA-SSD-------EFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSG-----MIAYGAT  161 (251)
T ss_dssp             CCCCCCBCT-TST-------THHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----BHHHHHH
T ss_pred             CccCCCCCc-ccc-------cCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCC-----CchhHHH
Confidence            997543210 111       1112223344899999999999987642  248999999887543322     2569999


Q ss_pred             HHHHHHHHH----h-----cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcC---cccC
Q 046297          233 KRKAEQYLA----D-----SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQF---EEAK  300 (331)
Q Consensus       233 K~~~e~~~~----~-----~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~---~~~~  300 (331)
                      |...+.+.+    +     .++++++++||++.++..  .......      ....+++++|+|++++.++.+   ....
T Consensus       162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~--~~~~~~~------~~~~~~~~~dva~~i~~l~~~~~~~~~t  233 (251)
T 3orf_A          162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN--RKYMSDA------NFDDWTPLSEVAEKLFEWSTNSDSRPTN  233 (251)
T ss_dssp             HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH--HHHCTTS------CGGGSBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred             HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch--hhhcccc------cccccCCHHHHHHHHHHHhcCccccCCc
Confidence            999998776    2     578999999999977532  1111111      123568999999999999988   3357


Q ss_pred             CceEEecc
Q 046297          301 FKAFDLAS  308 (331)
Q Consensus       301 ~~~~~i~~  308 (331)
                      |+.+++..
T Consensus       234 G~~i~v~~  241 (251)
T 3orf_A          234 GSLVKFET  241 (251)
T ss_dssp             TCEEEEEE
T ss_pred             ceEEEEec
Confidence            88999987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.87  E-value=1.5e-21  Score=171.86  Aligned_cols=200  Identities=20%  Similarity=0.202  Sum_probs=137.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      +++++|||||+|+||++++++|+++  |++|++++|++++.+++       ...+.++.+|++|++++.++++       
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999  99999999997665442       2347788999999999888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|+||||||.....  .+.....++++       ..+++|+.++..+++++    ++.+.++||++||..+......  
T Consensus        81 ~iD~lVnnAG~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--  149 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLS--PLAAVKVDEWE-------RMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT--  149 (264)
T ss_dssp             CCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC--
Confidence            799999999974321  11111222222       33488999887766655    4556779999999887544322  


Q ss_pred             CCCcchHHHHHHHHHHHHH----h-cCCCEEEEecCcccCCCcchhhhhccCCcccc-CCcccccCHHHHHHHHHHHhcC
Q 046297          223 SLGNGNILVWKRKAEQYLA----D-SGIPYTIIRAGGLQDKEGGIRELLVGKDDELL-QTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~----~-~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                         ...|+.+|...+.+.+    + .++++++|+||++.++.....  ......... .....+.+++|+|++++.++..
T Consensus       150 ---~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~  224 (264)
T 3tfo_A          150 ---AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTI--THEETMAAMDTYRAIALQPADIARAVRQVIEA  224 (264)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------CCCHHHHHHHHHHHHHS
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccc--cchhHHHHHHhhhccCCCHHHHHHHHHHHhcC
Confidence               2569999999887665    2 389999999999987653211  001000000 1112247899999999999988


Q ss_pred             cc
Q 046297          297 EE  298 (331)
Q Consensus       297 ~~  298 (331)
                      +.
T Consensus       225 ~~  226 (264)
T 3tfo_A          225 PQ  226 (264)
T ss_dssp             CT
T ss_pred             Cc
Confidence            75

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=1.1e-21  Score=173.66  Aligned_cols=194  Identities=14%  Similarity=0.068  Sum_probs=140.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++.+++||||||+|+||+++++.|+++  |++|++++|++++.+.+       ..++.++.+|++|++++.++++     
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999  99999999987654432       2357899999999998888775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||......  +       .+...++....+++|+.++.++++++    ++.+.++||++||..++.+.. 
T Consensus       106 ~g~iD~li~~Ag~~~~~~--~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-  175 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSD--L-------FATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP-  175 (272)
T ss_dssp             TCCCSEEEECCCCCCCCC--C-------GGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH-
T ss_pred             CCCCcEEEECCCcCCCcc--h-------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC-
Confidence              7899999999643210  0       01111112234488998866655554    556788999999987654321 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH----h------cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA----D------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~----~------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ....|+.+|...+.+.+    +      .++++++++||++.++....      .  .  .....+++++|+|+++
T Consensus       176 ----~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------~--~--~~~~~~~~~~dva~~i  241 (272)
T 1yb1_A          176 ----FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------P--S--TSLGPTLEPEEVVNRL  241 (272)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------T--H--HHHCCCCCHHHHHHHH
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------c--c--ccccCCCCHHHHHHHH
Confidence                12569999999887665    2      37999999999998775211      0  0  0013468999999999


Q ss_pred             HHHhcCcc
Q 046297          291 IQALQFEE  298 (331)
Q Consensus       291 ~~~l~~~~  298 (331)
                      +.++..+.
T Consensus       242 ~~~~~~~~  249 (272)
T 1yb1_A          242 MHGILTEQ  249 (272)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHcCC
Confidence            99998763

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.86  E-value=8.9e-22  Score=173.23  Aligned_cols=212  Identities=18%  Similarity=0.113  Sum_probs=146.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++++.+++       ..++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            34688999999999999999999999  99999999987654432       2347889999999998887775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|+||||||...... .+.....++++       ..+++|+.++.++++++.    +.+.++||++||..+...... 
T Consensus        83 g~id~lv~nAg~~~~~~-~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  153 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFA-PVQDYPSDDFA-------RVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN-  153 (262)
T ss_dssp             SCCCEEEECCCCCCCCB-CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT-
T ss_pred             CCCCEEEECCCCCCCCC-ccccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC-
Confidence             7999999999641111 01111111222       334889999888777764    346679999999866443221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hh---h----cc-CCc--------cccCC
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--EL---L----VG-KDD--------ELLQT  276 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~---~----~~-~~~--------~~~~~  276 (331)
                          ...|..+|...+.+.+       ..++++++|+||++..+.....  ..   .    .. ...        ..+  
T Consensus       154 ----~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  227 (262)
T 1zem_A          154 ----MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP--  227 (262)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST--
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC--
Confidence                2569999998876654       3689999999999877642110  00   0    00 000        011  


Q ss_pred             cccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          277 ETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       277 ~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ...+.+++|+|++++.++..+.  ..|+.+.+.+
T Consensus       228 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          228 MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence            1235789999999999987643  4678888765

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.86  E-value=1e-21  Score=174.01  Aligned_cols=213  Identities=9%  Similarity=0.038  Sum_probs=149.8

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCc---hhhhcC---CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEE---SKQKIG---GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~---~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+  |+||++++++|+++  |++|++++|+++   ..+++.   +.+.++.+|++|++++.++++     
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456889999999  99999999999999  999999999875   222221   247899999999999888775     


Q ss_pred             --CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+||||||.....  ...+.....+++       ...+++|+.++.++++++...  .-.+||++||..+..+..+
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAF-------NTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH  154 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHH-------HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC
Confidence              689999999975320  000111111222       334489999999999998765  1258999999876443222


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                           ...|+.+|...+.+.+       ..|+++++++||++.++.....    ..........+  ...+.+++|+|++
T Consensus       155 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~~~~~p~dva~~  227 (275)
T 2pd4_A          155 -----YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAP--LRKNVSLEEVGNA  227 (275)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST--TSSCCCHHHHHHH
T ss_pred             -----chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCC--cCCCCCHHHHHHH
Confidence                 2569999999887665       3589999999999988753210    00000000011  1235789999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++..+.  ..|+.+++.+
T Consensus       228 ~~~l~s~~~~~~tG~~~~vdg  248 (275)
T 2pd4_A          228 GMYLLSSLSSGVSGEVHFVDA  248 (275)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCccccCCCCCEEEECC
Confidence            999987643  4678888876

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.86  E-value=1.4e-21  Score=172.35  Aligned_cols=213  Identities=12%  Similarity=0.077  Sum_probs=150.4

Q ss_pred             CCCCeEEEECCCCh--hHHHHHHHHHhcCCCCeEEEEecCCchhhh-------cCC-CCcEEEccCCCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAGGR--TGQIVYKKLKERSEQYAARGLVRTEESKQK-------IGG-ADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~--iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-------l~~-~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ..+++||||||+|+  ||++++++|+++  |++|++++|+....+.       ... ++.++.+|++|++++.++++   
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            45688999999988  999999999999  9999999998643222       122 58899999999999888875   


Q ss_pred             ----CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||.....  ...+..       ...++....+++|+.++.++++++...-  -.+||++||..+..+.
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  155 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLN-------TNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM  155 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGG-------CCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC
T ss_pred             HHhCCeeEEEEccccccccccccchhh-------ccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC
Confidence                689999999975421  000001       1111122334889999999999887653  2489999998775433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      ..     ...|+.+|...+.+.+       ..|+++++++||++.++.....    ..........+  ...+.+++|+|
T Consensus       156 ~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~dva  228 (266)
T 3oig_A          156 PN-----YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAP--LRRTTTPEEVG  228 (266)
T ss_dssp             TT-----THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHST--TSSCCCHHHHH
T ss_pred             CC-----cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCC--CCCCCCHHHHH
Confidence            22     2569999999887765       3589999999999988542210    00000000011  12357899999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++.++..+.  ..|+++++.+
T Consensus       229 ~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          229 DTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHcCCchhcCcCCEEEECC
Confidence            99999998653  5689999987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.86  E-value=8.7e-22  Score=176.39  Aligned_cols=218  Identities=13%  Similarity=0.053  Sum_probs=154.5

Q ss_pred             cCCCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      .+.+++||||||+|  +||++++++|+++  |++|++++|+++..+.+      ...+.++++|++|++++.++++    
T Consensus        27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            34578999999998  9999999999999  99999999986443221      1347889999999999988875    


Q ss_pred             ---CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~~  219 (331)
                         ++|+||||||.....  ...+.....++++       ..+++|+.++.++++++...-  -.+||++||..+.....
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~  177 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFL-------TSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP  177 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHH-------HHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHH-------HHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC
Confidence               689999999975320  0011112222233       334889999999999987653  24899999987754332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      .     ...|+.+|..++.+.+       ..++++++|+||++.++.....    ..........+  ...+..++|+|+
T Consensus       178 ~-----~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~pedvA~  250 (296)
T 3k31_A          178 H-----YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSP--LRRNTTLDDVGG  250 (296)
T ss_dssp             T-----TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHST--TSSCCCHHHHHH
T ss_pred             C-----chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCC--CCCCCCHHHHHH
Confidence            2     2469999999887765       3589999999999998753211    00000000111  123578999999


Q ss_pred             HHHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          289 VCIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      +++.++....  ..|+++++.+   |...
T Consensus       251 ~v~fL~s~~a~~itG~~i~vdG---G~~~  276 (296)
T 3k31_A          251 AALYLLSDLGRGTTGETVHVDC---GYHV  276 (296)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST---TGGG
T ss_pred             HHHHHcCCccCCccCCEEEECC---Cccc
Confidence            9999998643  5689999987   6543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.86  E-value=7e-21  Score=164.01  Aligned_cols=207  Identities=15%  Similarity=0.010  Sum_probs=148.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhc---CCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQ---GIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~ag  156 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|+++..+.. ..++..+++|++|+++++++++   ++|++|||||
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            4789999999999999999999999  99999999998776553 3458889999999999988876   6899999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVW  232 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~s  232 (331)
                      .....    ...+.++|+       ..+++|+.++..+.+++    ++.+ .+||++||..+......     ...|..+
T Consensus        88 i~~~~----~~~~~~~w~-------~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~-----~~~Y~as  150 (242)
T 4b79_A           88 ISRDR----EEYDLATFE-------RVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSAD-----RPAYSAS  150 (242)
T ss_dssp             CCCGG----GGGSHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSS-----CHHHHHH
T ss_pred             CCCCc----ccCCHHHHH-------HHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCC-----CHHHHHH
Confidence            74321    122222333       33488988876666554    4444 69999999987543322     2569999


Q ss_pred             HHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--c
Q 046297          233 KRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--A  299 (331)
Q Consensus       233 K~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~  299 (331)
                      |..+..+.+       .+|++++.|.||++..+....    ..........+|-  ..+-.++|+|.+++.++.+..  .
T Consensus       151 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Pl--gR~g~peeiA~~v~fLaSd~a~~i  228 (242)
T 4b79_A          151 KGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPL--ARWGEAPEVASAAAFLCGPGASFV  228 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTT--CSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhCchhcCc
Confidence            999887665       479999999999998764211    0000000001111  124688999999999887654  4


Q ss_pred             CCceEEecc
Q 046297          300 KFKAFDLAS  308 (331)
Q Consensus       300 ~~~~~~i~~  308 (331)
                      .|+++.+.+
T Consensus       229 TG~~l~VDG  237 (242)
T 4b79_A          229 TGAVLAVDG  237 (242)
T ss_dssp             CSCEEEEST
T ss_pred             cCceEEECc
Confidence            688888876

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.86  E-value=4.7e-21  Score=170.69  Aligned_cols=207  Identities=16%  Similarity=0.174  Sum_probs=147.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh--------------cCCCCcEEEccCCCcccHHHHh
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK--------------IGGADDLFIGDIRDSNSIIPAI  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~--------------l~~~~~~v~~Dl~d~~~~~~~l  145 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|+.++.++              ...++.++++|++|++++.+++
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            45789999999999999999999999  9999999998764221              1335789999999999988887


Q ss_pred             c-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----CCCeEEEEccCCC
Q 046297          146 Q-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----GAKQIVLVGSMGG  214 (331)
Q Consensus       146 ~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~vk~~v~~SS~~~  214 (331)
                      +       ++|+||||||.....  .+.....++++       ..+++|+.++..+++++...    +.++||++||..+
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~-------~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  155 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLG--SIEEVPLKRFD-------LMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR  155 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCC--CTTTSCHHHHH-------HHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh
Confidence            6       799999999975321  11112222222       33479999999999887544    5679999999876


Q ss_pred             CCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHH
Q 046297          215 TNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       215 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      .....+    ....|+.+|...+.+.+       ..|+++++|+||++..... ..... +....    ...+.+++|+|
T Consensus       156 ~~~~~~----~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~-~~~~~-~~~~~----~~r~~~pedvA  225 (285)
T 3sc4_A          156 LEPKWL----RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA-VQNLL-GGDEA----MARSRKPEVYA  225 (285)
T ss_dssp             CSGGGS----CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH-HHHHH-TSCCC----CTTCBCTHHHH
T ss_pred             ccCCCC----CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH-HHhhc-ccccc----ccCCCCHHHHH
Confidence            543211    12679999999887765       3689999999995443321 11111 11111    12457899999


Q ss_pred             HHHHHHhcCcc-cCCceEEec
Q 046297          288 EVCIQALQFEE-AKFKAFDLA  307 (331)
Q Consensus       288 ~~~~~~l~~~~-~~~~~~~i~  307 (331)
                      ++++.++.++. ..|+.+.+.
T Consensus       226 ~~~~~l~s~~~~~tG~~i~~d  246 (285)
T 3sc4_A          226 DAAYVVLNKPSSYTGNTLLCE  246 (285)
T ss_dssp             HHHHHHHTSCTTCCSCEEEHH
T ss_pred             HHHHHHhCCcccccceEEEEc
Confidence            99999998764 456666554

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.86  E-value=5.1e-21  Score=165.90  Aligned_cols=206  Identities=12%  Similarity=0.040  Sum_probs=148.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      +|+||||||+++||+++++.|+++  |++|++++|++++..++.   .++..+++|++|++++.++++       ++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            478999999999999999999999  999999999987766543   347889999999999888775       69999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||.....  .+...+.++++..       +++|+.++..+.+++    ++.+ .++|++||..+......     ..
T Consensus        80 VNNAG~~~~~--~~~~~~~e~~~~~-------~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~-----~~  144 (247)
T 3ged_A           80 VNNACRGSKG--ILSSLLYEEFDYI-------LSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPD-----SE  144 (247)
T ss_dssp             EECCCCCCCC--GGGTCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTT-----CH
T ss_pred             EECCCCCCCC--CcccCCHHHHHHH-------HHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCC-----CH
Confidence            9999974432  2223333334443       489999877766655    4444 69999999987543321     25


Q ss_pred             hHHHHHHHHHHHHH------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCC
Q 046297          228 NILVWKRKAEQYLA------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKF  301 (331)
Q Consensus       228 ~y~~sK~~~e~~~~------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~  301 (331)
                      .|..+|..+..+.+      ..+++++.|.||++-.+...-  ........+|-  ..+..++|+|++++.++...-..|
T Consensus       145 ~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~--~~~~~~~~~Pl--~R~g~pediA~~v~fL~s~~~iTG  220 (247)
T 3ged_A          145 AYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE--FTQEDCAAIPA--GKVGTPKDISNMVLFLCQQDFITG  220 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-----CCHHHHHTSTT--SSCBCHHHHHHHHHHHHHCSSCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH--HHHHHHhcCCC--CCCcCHHHHHHHHHHHHhCCCCCC
Confidence            69999999876655      248999999999997664321  00000111221  124688999999999987554678


Q ss_pred             ceEEecc
Q 046297          302 KAFDLAS  308 (331)
Q Consensus       302 ~~~~i~~  308 (331)
                      +++.+.+
T Consensus       221 ~~i~VDG  227 (247)
T 3ged_A          221 ETIIVDG  227 (247)
T ss_dssp             CEEEEST
T ss_pred             CeEEECc
Confidence            8999886

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=8.4e-22  Score=170.63  Aligned_cols=202  Identities=8%  Similarity=0.056  Sum_probs=144.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc---------CCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ---------GIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~---------~~d~V  151 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|++++..   ....++.+|++|++++.++++         ++|+|
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQA---DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTS---SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecCccccc---cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            4578999999999999999999999  999999999876533   235677899999998887775         78999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      |||||.....  .+   .   .+...++....+++|+.++.++++++...  .-.+||++||..+..+..+     ...|
T Consensus        77 v~~Ag~~~~~--~~---~---~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~~Y  143 (236)
T 1ooe_A           77 FCVAGGWAGG--SA---S---SKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS-----MIGY  143 (236)
T ss_dssp             EECCCCCCCB--CT---T---STTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----BHHH
T ss_pred             EECCcccCCC--CC---c---ccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC-----cHHH
Confidence            9999964321  00   0   01111112334488999999999988764  2258999999877543222     2569


Q ss_pred             HHHHHHHHHHHH----h-----cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--
Q 046297          230 LVWKRKAEQYLA----D-----SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--  298 (331)
Q Consensus       230 ~~sK~~~e~~~~----~-----~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--  298 (331)
                      ..+|...+.+.+    +     .++++++++||++.++...  ... ...     ....+++++|+|++++..+..+.  
T Consensus       144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~--~~~-~~~-----~~~~~~~~~dvA~~i~~~l~s~~~~  215 (236)
T 1ooe_A          144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR--KWM-PNA-----DHSSWTPLSFISEHLLKWTTETSSR  215 (236)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH--HHS-TTC-----CGGGCBCHHHHHHHHHHHHHCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh--hcC-CCc-----cccccCCHHHHHHHHHHHHcCCCcc
Confidence            999999987765    2     3599999999999876421  111 110     11345788999999997774332  


Q ss_pred             -cCCceEEecc
Q 046297          299 -AKFKAFDLAS  308 (331)
Q Consensus       299 -~~~~~~~i~~  308 (331)
                       ..|+.+.+.+
T Consensus       216 ~~~G~~~~v~g  226 (236)
T 1ooe_A          216 PSSGALLKITT  226 (236)
T ss_dssp             CCTTCEEEEEE
T ss_pred             cccccEEEEec
Confidence             4588888876

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=1.8e-21  Score=170.08  Aligned_cols=194  Identities=16%  Similarity=0.092  Sum_probs=139.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------C-CCCcEEEccCCCcccHHHHhc---
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------G-GADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~-~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|++++.+++         . ..+.++.+|++|++++.++++   
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999  99999999997665432         1 457899999999998888775   


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||......       .   +...++....+++|+.++..+++++    ++.+..+||++||..+....
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~-------~---~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  152 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGS-------L---SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF  152 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCC-------C---SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------
T ss_pred             HhcCCCCEEEECCCcCCCCC-------C---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC
Confidence                6899999999743211       1   1111222334488999988877776    45567799999998765433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                      .+     ...|..+|...+.+.+       ..|+++++++||++.++...   ...   ...+  ...+++++|+|++++
T Consensus       153 ~~-----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~---~~~~--~~~~~~p~dva~~v~  219 (250)
T 3nyw_A          153 AD-----GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK---KAG---TPFK--DEEMIQPDDLLNTIR  219 (250)
T ss_dssp             CC-----TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH---HTT---CCSC--GGGSBCHHHHHHHHH
T ss_pred             CC-----CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh---hcC---CCcc--cccCCCHHHHHHHHH
Confidence            22     2569999999887665       35899999999999765321   111   1111  234689999999999


Q ss_pred             HHhcCcc
Q 046297          292 QALQFEE  298 (331)
Q Consensus       292 ~~l~~~~  298 (331)
                      .++..+.
T Consensus       220 ~l~s~~~  226 (250)
T 3nyw_A          220 CLLNLSE  226 (250)
T ss_dssp             HHHTSCT
T ss_pred             HHHcCCC
Confidence            9998764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.86  E-value=4.7e-21  Score=170.92  Aligned_cols=217  Identities=14%  Similarity=0.009  Sum_probs=147.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh----c----CCCCcEEEccCCC----cccHHHHhc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK----I----GGADDLFIGDIRD----SNSIIPAIQ  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~----l----~~~~~~v~~Dl~d----~~~~~~~l~  146 (331)
                      +.++++|||||+|+||+++++.|+++  |++|++++|++ ++.+.    +    ...+.++.+|++|    ++++.++++
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            45688999999999999999999999  99999999997 54332    1    2357889999999    888877765


Q ss_pred             -------CCCEEEEcccCCCCCCCCCCCCC-CC--CCccccccCCCcceehHHHHHHHHHHHHHc----C------CCeE
Q 046297          147 -------GIDALIILTSAVPKMKPDFDPAK-GG--RPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G------AKQI  206 (331)
Q Consensus       147 -------~~d~Vi~~ag~~~~~~~~~~~~~-~~--~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~------vk~~  206 (331)
                             ++|+||||||......  +.... ..  +.....++....+++|+.++..+++++...    +      ..+|
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTP--LVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCC--SCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCc--cccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence                   7999999999743210  00000 00  000111112234478999988888777543    3      4589


Q ss_pred             EEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhccCCccccCCcc
Q 046297          207 VLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVGKDDELLQTET  278 (331)
Q Consensus       207 v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~  278 (331)
                      |++||..+..+..+     ...|..+|..++.+.+       ..|+++++|+||++.++. ... ..........+-  .
T Consensus       177 v~isS~~~~~~~~~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p~--~  248 (288)
T 2x9g_A          177 VNLCDAMVDQPCMA-----FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRKVPL--G  248 (288)
T ss_dssp             EEECCTTTTSCCTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHHHTCTT--T
T ss_pred             EEEecccccCCCCC-----CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHHHHhhCCC--C
Confidence            99999887543322     2569999998887665       358999999999999886 210 000000000111  1


Q ss_pred             cc-cCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          279 RT-IARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       279 ~~-i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .+ .+++|+|++++.++..+.  ..|+.+++.+
T Consensus       249 r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  281 (288)
T 2x9g_A          249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDG  281 (288)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence            24 789999999999997643  4688888886

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.86  E-value=1.1e-21  Score=174.28  Aligned_cols=204  Identities=15%  Similarity=0.106  Sum_probs=139.0

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-------CC-CcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-------GA-DDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-------~~-~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +.+++++|||||+|+||++++++|+++  |++|++++|++++.+++.       .. +.++++|++|++++.++++    
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAE--GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999  999999999986654421       22 4889999999999888775    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC--CCeEEEEccCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG--AKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~--vk~~v~~SS~~~~~~  217 (331)
                         ++|+||||||...... .+.....++++       ..+++|+.++..+.+++    ++.+  -.+||++||..+...
T Consensus       108 ~~g~iD~lvnnAG~~~~~~-~~~~~~~~~~~-------~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~  179 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPV-PLEEVTFEQWN-------GIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP  179 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCC-CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC
T ss_pred             HcCCCCEEEECCCCCCCCC-CcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC
Confidence               6899999999743211 11111222222       33488999977666655    4443  469999999877544


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh-hhccCCccccCCcccccCHHHHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE-LLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      ..+     ...|+.+|...+.+.+       ..++++++|+||++.++...... .........+  ...+.+++|+|++
T Consensus       180 ~~~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~pedvA~~  252 (281)
T 4dry_A          180 RPN-----SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVA--AEPTIPIEHIAEA  252 (281)
T ss_dssp             CTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEE--ECCCBCHHHHHHH
T ss_pred             CCC-----ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhccc--ccCCCCHHHHHHH
Confidence            322     2569999999887765       36899999999999876532110 0000000011  1246799999999


Q ss_pred             HHHHhcCccc
Q 046297          290 CIQALQFEEA  299 (331)
Q Consensus       290 ~~~~l~~~~~  299 (331)
                      ++.++..+..
T Consensus       253 v~fL~s~~~~  262 (281)
T 4dry_A          253 VVYMASLPLS  262 (281)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHhCCCcc
Confidence            9999988754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.86  E-value=1.2e-21  Score=175.17  Aligned_cols=215  Identities=15%  Similarity=0.042  Sum_probs=150.2

Q ss_pred             ccCCCCeEEEECCCCh--hHHHHHHHHHhcCCCCeEEEEecCCchhhh---c---CCCCcEEEccCCCcccHHHHhc---
Q 046297           78 LSMAKSTVLVTGAGGR--TGQIVYKKLKERSEQYAARGLVRTEESKQK---I---GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~--iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~---l---~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      ....++++|||||+|+  ||++++++|+++  |++|++++|+++..+.   +   ...+.++.+|++|++++.++++   
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            3456789999999987  999999999999  9999999998532221   1   2347889999999999888875   


Q ss_pred             ----CCCEEEEcccCCCCC--CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKM--KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~~  218 (331)
                          ++|+||||||.....  ...+.....++++       ..+++|+.++..+++++...-  -.+||++||..+....
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~  177 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFT-------NTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM  177 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHH-------HHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC
Confidence                789999999975310  0011111222222       334899999999999887642  3489999998765433


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      ..     ...|+.+|...+.+.+       ..|+++++|+||++.++....    ...........+  ...+.+++|+|
T Consensus       178 ~~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~pedvA  250 (293)
T 3grk_A          178 PN-----YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP--LRRTVTIDEVG  250 (293)
T ss_dssp             TT-----TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHST--TSSCCCHHHHH
T ss_pred             Cc-----hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCC--CCCCCCHHHHH
Confidence            22     2569999999887765       368999999999998864321    000000000111  12357899999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++.++....  ..|+++++.+
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdG  273 (293)
T 3grk_A          251 DVGLYFLSDLSRSVTGEVHHADS  273 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHcCccccCCcceEEEECC
Confidence            99999987653  5689999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.86  E-value=4e-21  Score=170.68  Aligned_cols=216  Identities=11%  Similarity=0.074  Sum_probs=152.3

Q ss_pred             hccCCCCeEEEECCCCh--hHHHHHHHHHhcCCCCeEEEEecCC--chhhhc---CCCCcEEEccCCCcccHHHHhc---
Q 046297           77 VLSMAKSTVLVTGAGGR--TGQIVYKKLKERSEQYAARGLVRTE--ESKQKI---GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        77 ~~~~~~~~VlVtGatG~--iG~~l~~~Ll~~~~g~~V~~l~R~~--~~~~~l---~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      +....+++||||||+|+  ||++++++|+++  |++|++++|+.  +..+++   ...+.++.+|++|++++.++++   
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHH
Confidence            44556789999999966  999999999999  99999999987  333333   2348899999999999888875   


Q ss_pred             ----CCCEEEEcccCCCCCC--CCCCC-CCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCC
Q 046297          147 ----GIDALIILTSAVPKMK--PDFDP-AKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~--~~~~~-~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~  216 (331)
                          ++|+||||||......  ..+.. ....++       ...+++|+.++.++++++...   +..+||++||..+..
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~  171 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGF-------SIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK  171 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHH-------HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc
Confidence                5799999999754210  00000 111122       233488999999998887653   346999999987754


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARAD  285 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~D  285 (331)
                      +..+     ...|+.+|...+.+.+       ..++++++++||++.++.....    ..........+  ...+.+++|
T Consensus       172 ~~~~-----~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~~~~~ped  244 (280)
T 3nrc_A          172 AMPS-----YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSP--LKKNVDIME  244 (280)
T ss_dssp             CCTT-----THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHST--TCSCCCHHH
T ss_pred             CCCC-----chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCC--CCCCCCHHH
Confidence            4322     2569999999887765       3689999999999988753211    00000000011  123578999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|++++.++.++.  ..|+++++.+
T Consensus       245 vA~~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          245 VGNTVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCcccCCcCCcEEEECC
Confidence            9999999987653  5689999987

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.86  E-value=5.5e-21  Score=170.74  Aligned_cols=219  Identities=14%  Similarity=0.028  Sum_probs=148.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe-cCCchhhh----c----CCCCcEEEccCCCcc----------
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV-RTEESKQK----I----GGADDLFIGDIRDSN----------  139 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~-R~~~~~~~----l----~~~~~~v~~Dl~d~~----------  139 (331)
                      ++.++++|||||+|+||++++++|+++  |++|++++ |++++.+.    +    ..++.++++|++|++          
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            455789999999999999999999999  99999999 88755432    1    235788999999999          


Q ss_pred             -------cHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCC--CC-----CccccccCCCcceehHHHHHHHHHHH
Q 046297          140 -------SIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKG--GR-----PEFYFEEGAYPEQVDWIGQKNQIDAA  198 (331)
Q Consensus       140 -------~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~--~~-----p~~~~~~~~~~~~~nv~~~~~ll~aa  198 (331)
                             ++.++++       ++|+||||||.....  .+.....  ..     .+...++....+++|+.++..+++++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPT--PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--CCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC--ChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                   8887775       799999999975321  1111110  00     00001112234488998888877776


Q ss_pred             H----HcC------CCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc
Q 046297          199 K----AAG------AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG  261 (331)
Q Consensus       199 ~----~~~------vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~  261 (331)
                      .    +.+      .++||++||..+..+...     ...|..+|...+.+.+       ..++++++|+||++..+. .
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~-----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~  235 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG-----YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  235 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCCTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcCCCCC-----CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c
Confidence            4    444      579999999877543322     2579999999887665       358999999999997764 2


Q ss_pred             h-hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          262 I-RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       262 ~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      . ...........+- +..+.+++|+|++++.++..+.  ..|+.+++.+
T Consensus       236 ~~~~~~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  284 (291)
T 1e7w_A          236 MPPAVWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  284 (291)
T ss_dssp             SCHHHHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCHHHHHHHHhhCCC-CCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence            1 0000000000111 1136789999999999997543  4688888887

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.85  E-value=1.7e-20  Score=164.42  Aligned_cols=212  Identities=10%  Similarity=0.060  Sum_probs=148.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      +.++|++|||||+++||+++++.|+++  |++|++++|+.++  .+ .+..++++|++|++++.++++       ++|++
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLEL--GAQVLTTARARPE--GL-PEELFVEADLTTKEGCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHT--TCEEEEEESSCCT--TS-CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHc--CCEEEEEECCchh--CC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            345789999999999999999999999  9999999997643  12 235689999999998887765       68999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||........+...+.++++..       +++|+.++..+.+    .+++.+-.+||++||..+..+..    ....
T Consensus        83 VnnAG~~~~~~~~~~~~~~e~~~~~-------~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~----~~~~  151 (261)
T 4h15_A           83 VHMLGGSSAAGGGFSALSDDDWYNE-------LSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP----ESTT  151 (261)
T ss_dssp             EECCCCCCCCSSCGGGCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----TTCH
T ss_pred             EECCCCCccCCCCcccCCHHHHHHH-------HHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC----CccH
Confidence            9999975433222223333333333       3889888766555    45566767999999987644322    1225


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-h-h--------------hhccCCccccCCcccccCHH
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-R-E--------------LLVGKDDELLQTETRTIARA  284 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~-~--------------~~~~~~~~~~~~~~~~i~v~  284 (331)
                      .|..+|..++.+.+       .+|++++.|.||++..+.... . .              ........+|-  ..+..++
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--gR~g~pe  229 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL--GRPAKPE  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT--SSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC--CCCcCHH
Confidence            68999999887665       479999999999997763210 0 0              00000011111  1356899


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEecc
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |+|++++.++.+..  ..|+++.+.+
T Consensus       230 evA~~v~fLaS~~a~~itG~~i~VDG  255 (261)
T 4h15_A          230 EVANLIAFLASDRAASITGAEYTIDG  255 (261)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhCchhcCccCcEEEECC
Confidence            99999999887554  4688999987

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.85  E-value=1e-20  Score=166.76  Aligned_cols=212  Identities=17%  Similarity=0.090  Sum_probs=151.2

Q ss_pred             ccCCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCCchh-----hh----cCCCCcEEEccCCCcccHHHHhc
Q 046297           78 LSMAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTEESK-----QK----IGGADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        78 ~~~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-----~~----l~~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      .+..+++||||||+  |+||++++++|+++  |++|++++|+.++.     ++    ...++.++++|++|++++.++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            44567899999999  99999999999999  99999999886433     11    23458889999999999888775


Q ss_pred             -------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCC
Q 046297          147 -------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGT  215 (331)
Q Consensus       147 -------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~  215 (331)
                             ++|+||||||......  +.....++++       ..+++|+.++.++++++    ++.+..+||++||..+.
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~--~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  164 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSG--ILDGSVEAWN-------HVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGH  164 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSC--TTTSCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHHHHcCCCCEEEECCCcCCCCC--cccCCHHHHH-------HHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccc
Confidence                   6799999999754321  1111222222       33488999988887776    55667799999998765


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHH----hc--CCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHH
Q 046297          216 NLNHPLNSLGNGNILVWKRKAEQYLA----DS--GIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARA  284 (331)
Q Consensus       216 ~~~~~~~~~~~~~y~~sK~~~e~~~~----~~--~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~  284 (331)
                      ....+   .....|+.+|...+.+.+    +.  .++++.+.||++..+....     ...+...   .+  ...+.+++
T Consensus       165 ~~~~~---~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---~~--~~r~~~~~  236 (267)
T 3gdg_A          165 IANFP---QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSM---IP--MGRDGLAK  236 (267)
T ss_dssp             SCCSS---SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTT---ST--TSSCEETH
T ss_pred             ccCCC---CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhc---CC--CCCCcCHH
Confidence            43322   122579999999887765    22  3789999999998765321     1111110   11  13457899


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEecc
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |+|++++.++....  ..|+++++.+
T Consensus       237 dva~~~~~l~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          237 ELKGAYVYFASDASTYTTGADLLIDG  262 (267)
T ss_dssp             HHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             HHHhHhheeecCccccccCCEEEECC
Confidence            99999999987643  5688999987

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.85  E-value=6e-21  Score=168.40  Aligned_cols=207  Identities=14%  Similarity=0.089  Sum_probs=144.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-Cchhhh-------cCCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESKQK-------IGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .++++|||||+|+||++++++|+++  |++|+++.++ .+..+.       ....+.++++|++|++++.++++      
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999  9999988554 433332       23457889999999999888875      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                       ++|+||||||......  +.....+++       ...+++|+.++.++++++...  .-.+||++||..+......   
T Consensus       104 g~iD~lvnnAG~~~~~~--~~~~~~~~~-------~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  171 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTT--IAETGDAVF-------DRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS---  171 (267)
T ss_dssp             SCEEEEEECCCCCCCCC--GGGCCHHHH-------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT---
T ss_pred             CCCCEEEECCCCCCCCC--hhhCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC---
Confidence             7899999999753211  111111122       233479999999999888654  2248999999865433222   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch------hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI------RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~------~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                        ...|+.+|...+.+.+       ..|+++++++||++.++....      ...+...   .+  ...+.+++|+|+++
T Consensus       172 --~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---~p--~~r~~~pedvA~~v  244 (267)
T 3u5t_A          172 --YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKL---AP--LERLGTPQDIAGAV  244 (267)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTS---ST--TCSCBCHHHHHHHH
T ss_pred             --chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhc---CC--CCCCcCHHHHHHHH
Confidence              2569999999987765       258999999999998764211      0000000   01  12457899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++....  ..|+++++.+
T Consensus       245 ~~L~s~~~~~itG~~i~vdG  264 (267)
T 3u5t_A          245 AFLAGPDGAWVNGQVLRANG  264 (267)
T ss_dssp             HHHHSTTTTTCCSEEEEESS
T ss_pred             HHHhCccccCccCCEEEeCC
Confidence            99987654  4688999986

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.85  E-value=4e-21  Score=167.36  Aligned_cols=205  Identities=15%  Similarity=0.085  Sum_probs=145.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccC--CCcccHHHHhc--
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDI--RDSNSIIPAIQ--  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl--~d~~~~~~~l~--  146 (331)
                      ...+++|+||||+|+||++++++|+++  |++|++++|++++.+++        .....++.+|+  +|.+++.++++  
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence            445789999999999999999999999  99999999997665442        13467888888  88888877765  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~  217 (331)
                           ++|+||||||...... .+.....+++       ...+++|+.++..+++++    ++.+.++||++||..+...
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  160 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPRT-PLEQLPDEDF-------MQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG  160 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCS-CGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC
T ss_pred             HHhCCCCCEEEECCccCCCCC-CcccCCHHHH-------HHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC
Confidence                 7999999999743211 0111111222       233488999998888877    4456679999999876543


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------h-cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------D-SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      ..+     ...|+.+|...+.+.+       . .+++++.++||++..+...  .....      .....+..++|+|++
T Consensus       161 ~~~-----~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~--~~~~~------~~~~~~~~p~dva~~  227 (247)
T 3i1j_A          161 RAN-----WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRA--QAYPD------ENPLNNPAPEDIMPV  227 (247)
T ss_dssp             CTT-----CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHH--HHSTT------SCGGGSCCGGGGTHH
T ss_pred             CCC-----cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccch--hcccc------cCccCCCCHHHHHHH
Confidence            322     2569999999887665       2 5789999999999765321  11111      112345789999999


Q ss_pred             HHHHhcCcc--cCCceEEe
Q 046297          290 CIQALQFEE--AKFKAFDL  306 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i  306 (331)
                      ++.++..+.  ..|+.+++
T Consensus       228 ~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          228 YLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHhCchhccccCeeecC
Confidence            999987653  45666664

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.85  E-value=3.4e-21  Score=167.38  Aligned_cols=202  Identities=11%  Similarity=0.023  Sum_probs=145.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc---------CCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ---------GIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~---------~~d~V  151 (331)
                      .+++||||||+|+||++++++|+++  |++|++++|++++..   ....++.+|++|++++.++++         ++|+|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEA---SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTS---SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCChhhcc---CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            3678999999999999999999999  999999999876533   235677899999998887775         68999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      |||||.....  .+   .   .+...++....+++|+.++..+++++...  .-++||++||..+.....+     ...|
T Consensus        81 v~~Ag~~~~~--~~---~---~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----~~~Y  147 (241)
T 1dhr_A           81 LCVAGGWAGG--NA---K---SKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG-----MIGY  147 (241)
T ss_dssp             EECCCCCCCB--CT---T---CTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----BHHH
T ss_pred             EEcccccCCC--CC---c---ccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC-----chHH
Confidence            9999974321  00   0   01111112233488999999999988764  1258999999877543322     2569


Q ss_pred             HHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--
Q 046297          230 LVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--  298 (331)
Q Consensus       230 ~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--  298 (331)
                      ..+|...+.+.+         ..++++++++||++.++...  ... .. .    ....+++.+|+|++++.++..+.  
T Consensus       148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~--~~~-~~-~----~~~~~~~~~~vA~~v~~l~~~~~~~  219 (241)
T 1dhr_A          148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR--KSM-PE-A----DFSSWTPLEFLVETFHDWITGNKRP  219 (241)
T ss_dssp             HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH--HHS-TT-S----CGGGSEEHHHHHHHHHHHHTTTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc--ccC-cc-h----hhccCCCHHHHHHHHHHHhcCCCcC
Confidence            999999998776         23699999999998765321  111 11 0    11235788999999999997653  


Q ss_pred             cCCceEEecc
Q 046297          299 AKFKAFDLAS  308 (331)
Q Consensus       299 ~~~~~~~i~~  308 (331)
                      ..|+.+.+.+
T Consensus       220 ~~G~~~~v~g  229 (241)
T 1dhr_A          220 NSGSLIQVVT  229 (241)
T ss_dssp             CTTCEEEEEE
T ss_pred             ccceEEEEeC
Confidence            4578888876

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.85  E-value=1.3e-20  Score=165.53  Aligned_cols=212  Identities=16%  Similarity=0.056  Sum_probs=139.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|++++.+.+       ..++.++.+|++|++++.++++      
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKA--GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            45688999999999999999999999  99999999987654432       2347889999999988877653      


Q ss_pred             --CCCEEEEcccCCCC-----CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCC
Q 046297          147 --GIDALIILTSAVPK-----MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGT  215 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~  215 (331)
                        ++|+||||||....     ....+.....++++.       .+++|+.++..+.+++    ++.+.++||++||..+.
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  153 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDD-------INNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSL  153 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHH-------HHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGT
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHH-------HHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhc
Confidence              57999999952110     001111122222223       3377888876655544    45667899999998765


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC-Ccc-cc--CCc-ccccCH
Q 046297          216 NLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK-DDE-LL--QTE-TRTIAR  283 (331)
Q Consensus       216 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~-~~~-~~--~~~-~~~i~v  283 (331)
                      ...      ....|+.+|...+.+.+       ..++++++++||++.++........... ... ..  ... .....+
T Consensus       154 ~~~------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  227 (260)
T 2qq5_A          154 QYM------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETT  227 (260)
T ss_dssp             SCC------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHH
T ss_pred             CCC------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCH
Confidence            321      12579999999987765       3589999999999988753210000000 000 00  000 113578


Q ss_pred             HHHHHHHHHHhcCccc---CCceEEe
Q 046297          284 ADVAEVCIQALQFEEA---KFKAFDL  306 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~~---~~~~~~i  306 (331)
                      +|+|++++.++..+..   .|+.+.+
T Consensus       228 e~va~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          228 ELSGKCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             HHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred             HHHHHHHHHHhcCcccccccceeech
Confidence            9999999999876532   4555544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.85  E-value=4.5e-20  Score=161.24  Aligned_cols=211  Identities=11%  Similarity=0.060  Sum_probs=147.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh------cCCCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK------IGGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~------l~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .++|++|||||+++||+++++.|+++  |++|++++|+.+..+.      ...+..++.+|++|++++.++++       
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEE--RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999  9999999998764322      24568899999999998887775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|++|||||......  + ....++|+       ..+++|+.++..+.+++    ++.+ .+||++||..+......  
T Consensus        83 ~iDiLVNnAGi~~~~~--~-~~~~e~~~-------~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~--  149 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIG--L-DAGRDAFV-------ASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGN--  149 (258)
T ss_dssp             CCCEEEECCCCCCCCC--T-TSCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSS--
T ss_pred             CCCEEEECCCCCCCCC--c-cCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCC--
Confidence            6999999999754321  1 11122222       33488888876666554    4444 69999999976443221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhhccCCcc---c-cCC--cccccCHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELLVGKDDE---L-LQT--ETRTIARADVAE  288 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~---~-~~~--~~~~i~v~Dva~  288 (331)
                         ...|..+|..+..+.+       .+|++++.|.||++..+..... .........   + ...  +..+..++|+|.
T Consensus       150 ---~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~  226 (258)
T 4gkb_A          150 ---TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIAD  226 (258)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHH
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence               2569999999887665       4799999999999987653210 000000000   0 011  124678999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.+..  ..|+++.+.+
T Consensus       227 ~v~fLaS~~a~~iTG~~i~VDG  248 (258)
T 4gkb_A          227 TAVFLLSPRASHTTGEWLFVDG  248 (258)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhcCccCCeEEECC
Confidence            9999887654  4788999987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.85  E-value=1.7e-21  Score=171.49  Aligned_cols=218  Identities=11%  Similarity=0.037  Sum_probs=145.4

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch---hhh----c---CCCCcEEEccCCCcccHHHHhc--
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES---KQK----I---GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~---~~~----l---~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      +..++++|||||+|+||++++++|+++  |++|++++|....   .++    +   ..++.++++|++|++++.++++  
T Consensus         8 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            8 DLKNKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999  9999999875432   222    1   2347889999999999988876  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~  219 (331)
                           ++|+||||||.....  .+.....+++       ...+++|+.++..+++++...  +..+||++||..+.....
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~  156 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKK--PIVETSEAEF-------DAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG  156 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSS--CGGGCCHHHH-------HHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC
T ss_pred             HHHcCCCCEEEECCCCCCCC--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC
Confidence                 689999999975431  1111112222       233489999999999998764  346899999986543322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccC---CcccccCHHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQ---TETRTIARADVAEV  289 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~---~~~~~i~v~Dva~~  289 (331)
                      ..     ..|+.+|...+.+.+       ..++++++++||++..+...  ............   ....+.+++|+|++
T Consensus       157 ~~-----~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~r~~~pedvA~~  229 (262)
T 3ksu_A          157 FY-----STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFY--GQETKESTAFHKSQAMGNQLTKIEDIAPI  229 (262)
T ss_dssp             CC-----CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHH--TCC------------CCCCSCCGGGTHHH
T ss_pred             CC-----chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc--ccCchHHHHHHHhcCcccCCCCHHHHHHH
Confidence            21     348899999887765       25899999999999765311  000000000000   11245789999999


Q ss_pred             HHHHhcCcc-cCCceEEeccCCCCCCCCH
Q 046297          290 CIQALQFEE-AKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       290 ~~~~l~~~~-~~~~~~~i~~~~~~~~~t~  317 (331)
                      ++.++.+.. ..|+.+++.+   |.....
T Consensus       230 v~~L~s~~~~itG~~i~vdG---g~~~~~  255 (262)
T 3ksu_A          230 IKFLTTDGWWINGQTIFANG---GYTTRE  255 (262)
T ss_dssp             HHHHHTTTTTCCSCEEEEST---TCCCC-
T ss_pred             HHHHcCCCCCccCCEEEECC---CccCCC
Confidence            999987633 4689999987   554443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.84  E-value=1.8e-20  Score=164.78  Aligned_cols=211  Identities=15%  Similarity=0.109  Sum_probs=152.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      .++|++|||||+++||+.+++.|+++  |++|++++|+++++++    +..+...+++|++|+++++++++       ++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999  9999999999876554    45568899999999999888775       68


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      |++|||||.....  ++...+.++|+..+       ++|+.++..+.+++...  .-.++|++||..+......     .
T Consensus       105 DiLVNNAG~~~~~--~~~~~~~e~w~~~~-------~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~-----~  170 (273)
T 4fgs_A          105 DVLFVNAGGGSML--PLGEVTEEQYDDTF-------DRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA-----F  170 (273)
T ss_dssp             EEEEECCCCCCCC--CTTSCCHHHHHHHH-------HHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT-----C
T ss_pred             CEEEECCCCCCCC--ChhhccHHHHHHHH-------HHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC-----c
Confidence            9999999974432  23333344444444       99999998888887543  1247999999877543221     2


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---------hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---------RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---------~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      ..|..+|..+..+.+       .+|++++.|.||++..+....         ..........+|-  ..+-.++|+|.++
T Consensus       171 ~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl--gR~g~peeiA~~v  248 (273)
T 4fgs_A          171 SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM--GRVGRAEEVAAAA  248 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT--SSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC--CCCcCHHHHHHHH
Confidence            569999999887765       468999999999997764210         0000000011111  1246789999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.+..  ..|+++.+.+
T Consensus       249 ~FLaSd~a~~iTG~~i~VDG  268 (273)
T 4fgs_A          249 LFLASDDSSFVTGAELFVDG  268 (273)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhcCccCCeEeECc
Confidence            99987654  4688898886

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.84  E-value=2.4e-20  Score=165.15  Aligned_cols=203  Identities=16%  Similarity=0.108  Sum_probs=141.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------------CCCCcEEEccCCCcccHHHHh
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------------GGADDLFIGDIRDSNSIIPAI  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------------~~~~~~v~~Dl~d~~~~~~~l  145 (331)
                      +.++++|||||+|+||++++++|+++  |++|++++|+.++.+.+              ..++.++++|++|++++.+++
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            45789999999999999999999999  99999999987643221              234778999999999988877


Q ss_pred             c-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCC
Q 046297          146 Q-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGG  214 (331)
Q Consensus       146 ~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~  214 (331)
                      +       ++|+||||||......  +.....+++       ...+++|+.++..+++++.    +.+..+||++||..+
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~--~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  152 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRG--TLDTPMKRF-------DLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS  152 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCC--GGGSCHHHH-------HHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcccCCC--cccCCHHHH-------HHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHh
Confidence            5       7899999999743211  111111122       2334899999888887764    345679999999876


Q ss_pred             CCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHH
Q 046297          215 TNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       215 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      ..... .  .....|..+|...+.+.+       ..|+++++++||++......  ....+.      ....+.+++|+|
T Consensus       153 ~~~~~-~--~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~--~~~~~~------~~~~~~~pedvA  221 (274)
T 3e03_A          153 LNPAW-W--GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI--NMLPGV------DAAACRRPEIMA  221 (274)
T ss_dssp             CCHHH-H--HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------CC------CGGGSBCTHHHH
T ss_pred             cCCCC-C--CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh--hhcccc------cccccCCHHHHH
Confidence            44310 0  011569999999887665       36899999999954433211  111111      112367899999


Q ss_pred             HHHHHHhcCcc--cCCceE
Q 046297          288 EVCIQALQFEE--AKFKAF  304 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~  304 (331)
                      ++++.++..+.  ..|+.+
T Consensus       222 ~~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          222 DAAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHHHTSCCTTCCSCEE
T ss_pred             HHHHHHhCccccccCCeEE
Confidence            99999997654  356666

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.84  E-value=9.6e-21  Score=168.71  Aligned_cols=194  Identities=16%  Similarity=0.180  Sum_probs=139.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------C-CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------G-GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~-~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      +.+++||||||+|+||+++++.|+++  |++|++++|++++.+.+       . ..+.++.+|++|++++.++++     
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999  99999999997665442       1 247889999999998887775     


Q ss_pred             --CCCEEEEc-ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc---CCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIIL-TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA---GAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~-ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|+|||| +|.....   .....       .++....+++|+.++.++++++...   +.++||++||..+..+..+
T Consensus       104 ~g~iD~li~naag~~~~~---~~~~~-------~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~  173 (286)
T 1xu9_A          104 MGGLDMLILNHITNTSLN---LFHDD-------IHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM  173 (286)
T ss_dssp             HTSCSEEEECCCCCCCCC---CCCSC-------HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT
T ss_pred             cCCCCEEEECCccCCCCc---cccCC-------HHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC
Confidence              79999999 5643211   00111       1112233488999988888776432   3469999999876543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                           ...|+.+|...+.+.+         ..++++++++||++.++...  ....+      .....+++++|+|+.++
T Consensus       174 -----~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~--~~~~~------~~~~~~~~~~~vA~~i~  240 (286)
T 1xu9_A          174 -----VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM--KAVSG------IVHMQAAPKEECALEII  240 (286)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH--HHSCG------GGGGGCBCHHHHHHHHH
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH--Hhccc------cccCCCCCHHHHHHHHH
Confidence                 2579999999876653         24899999999998765321  11111      11245689999999999


Q ss_pred             HHhcCcc
Q 046297          292 QALQFEE  298 (331)
Q Consensus       292 ~~l~~~~  298 (331)
                      .++..+.
T Consensus       241 ~~~~~~~  247 (286)
T 1xu9_A          241 KGGALRQ  247 (286)
T ss_dssp             HHHHTTC
T ss_pred             HHHhcCC
Confidence            9997653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.84  E-value=9.7e-21  Score=164.89  Aligned_cols=211  Identities=12%  Similarity=-0.023  Sum_probs=150.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      -++|++|||||+++||+++++.|+++  |++|++.+|++++.++.       ..++..+++|++|+++++++++      
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            35789999999999999999999999  99999999997665432       2357888999999999988775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HH-cCCCeEEEEccCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KA-AGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~-~~vk~~v~~SS~~~~~~~~~  220 (331)
                       ++|++|||||.....  ++...+.++|+..+       ++|+.++..+.+++    ++ .+-.+||++||..+......
T Consensus        85 G~iDiLVNNAG~~~~~--~~~~~~~e~~~~~~-------~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~  155 (255)
T 4g81_D           85 IHVDILINNAGIQYRK--PMVELELENWQKVI-------DTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT  155 (255)
T ss_dssp             CCCCEEEECCCCCCCC--CGGGCCHHHHHHHH-------HHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT
T ss_pred             CCCcEEEECCCCCCCC--ChhhCCHHHHHHHH-------HHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC
Confidence             689999999975432  22233333444444       88998877666554    33 34569999999987543221


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                           ...|..+|..+..+.+       .+|++++.|.||++..+.....    .........+|-  ..+..++|+|.+
T Consensus       156 -----~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl--~R~g~pediA~~  228 (255)
T 4g81_D          156 -----VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPS--QRWGRPEELIGT  228 (255)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTT--CSCBCGGGGHHH
T ss_pred             -----chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCC--CCCcCHHHHHHH
Confidence                 2569999999887665       4799999999999987643210    000000011111  135688999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.+..  ..|+++.+.+
T Consensus       229 v~fL~S~~a~~iTG~~i~VDG  249 (255)
T 4g81_D          229 AIFLSSKASDYINGQIIYVDG  249 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCchhCCCcCCEEEECC
Confidence            999887654  4688898886

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.84  E-value=5.7e-20  Score=167.86  Aligned_cols=208  Identities=18%  Similarity=0.155  Sum_probs=146.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh--------------cCCCCcEEEccCCCcccHHHH
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK--------------IGGADDLFIGDIRDSNSIIPA  144 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~--------------l~~~~~~v~~Dl~d~~~~~~~  144 (331)
                      +..+++||||||+|+||++++++|+++  |++|++++|+.++.+.              ....+.++.+|++|++++.++
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            345789999999999999999999999  9999999998764221              123478899999999998888


Q ss_pred             hc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCC
Q 046297          145 IQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMG  213 (331)
Q Consensus       145 l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~  213 (331)
                      ++       ++|+||||||.....  .+.....+++       ...+++|+.++..+++++.    +.+..+||++||..
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~--~~~~~~~~~~-------~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~  190 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLT--NTLDTPTKRL-------DLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL  190 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCC--CTTTCCHHHH-------HHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHH
Confidence            76       799999999975431  1111112222       2334899999988888874    44667999999987


Q ss_pred             CCCCCCCCCCCCcchHHHHHHHHHHHHH----h--cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHH
Q 046297          214 GTNLNHPLNSLGNGNILVWKRKAEQYLA----D--SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       214 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~--~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      +..... .  .....|..+|...+.+.+    +  .++++++|.||++....  ..+.+.+..     ....+.+++|+|
T Consensus       191 ~~~~~~-~--~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--~~~~~~~~~-----~~~r~~~pedvA  260 (346)
T 3kvo_A          191 NLNPVW-F--KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--AMDMLGGPG-----IESQCRKVDIIA  260 (346)
T ss_dssp             CCCGGG-T--SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--HHHHHCC-------CGGGCBCTHHHH
T ss_pred             HcCCCC-C--CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--HHHhhcccc-----ccccCCCHHHHH
Confidence            654321 1  122579999999887665    2  57999999999744332  112222111     122357899999


Q ss_pred             HHHHHHhcCcc-cCCceEEecc
Q 046297          288 EVCIQALQFEE-AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~-~~~~~~~i~~  308 (331)
                      ++++.++.... ..|+.+ +.+
T Consensus       261 ~~v~~L~s~~~~itG~~i-vdg  281 (346)
T 3kvo_A          261 DAAYSIFQKPKSFTGNFV-IDE  281 (346)
T ss_dssp             HHHHHHHTSCTTCCSCEE-EHH
T ss_pred             HHHHHHHhcCCCCCceEE-ECC
Confidence            99999998733 356655 543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.84  E-value=7.6e-21  Score=166.36  Aligned_cols=207  Identities=14%  Similarity=0.043  Sum_probs=147.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+++||||||+|+||++++++|+++  |++|+++ .|+.++.++.       ...+.++.+|++|.+.+.++++      
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4688999999999999999999999  9999886 4554443321       2347788999999988887764      


Q ss_pred             -------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCC
Q 046297          147 -------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 -------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~  217 (331)
                             ++|+||||||......  +.....+++       ...+++|+.++..+++++...  +..+||++||..+..+
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~--~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~  154 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAF--IEETTEQFF-------DRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS  154 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC
T ss_pred             cccccCCcccEEEECCCCCCCCC--hhhCCHHHH-------HHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC
Confidence                   2899999999743211  101111111       233488999999999988764  3458999999876543


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-------hhhccCCccccCCcccccCH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-------ELLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~i~v  283 (331)
                      ...     ...|+.+|...+.+.+       ..++++++++||++.++.....       ......     .....+.++
T Consensus       155 ~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  224 (255)
T 3icc_A          155 LPD-----FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTI-----SAFNRLGEV  224 (255)
T ss_dssp             CTT-----BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHT-----STTSSCBCH
T ss_pred             CCC-----cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhcc-----CCcCCCCCH
Confidence            322     2569999999887665       3589999999999988753210       000000     111346789


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+|++++.++....  ..|+++++.+
T Consensus       225 ~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          225 EDIADTAAFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHHhCcccCCccCCEEEecC
Confidence            999999999887543  5689999987

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.84  E-value=2.4e-20  Score=165.73  Aligned_cols=217  Identities=14%  Similarity=0.093  Sum_probs=147.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      ..++++|||||+|+||++++++|+++  |++|++++|+.++.+++    ..++.++.+|++|++++.++++       ++
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAE--GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            34688999999999999999999999  99999999998765543    3468899999999998887775       68


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----cCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----AGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||....... +....   .+...+.-...+++|+.++..+++++..    .+ .++|++||..+..+...    
T Consensus        81 D~lvnnAg~~~~~~~-~~~~~---~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~----  151 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTA-LADLP---EDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGG----  151 (281)
T ss_dssp             CEEECCCCCCCTTCC-GGGSC---TTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSS----
T ss_pred             CEEEECCCcCccccc-cccCC---hhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCC----
Confidence            999999997533211 00000   0100001122347899998888877643    33 69999999877543322    


Q ss_pred             CcchHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcchhh------hhccCCc-c-cc--CCcccccCHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGIRE------LLVGKDD-E-LL--QTETRTIARADVAE  288 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~~~------~~~~~~~-~-~~--~~~~~~i~v~Dva~  288 (331)
                       ...|..+|...+.+.+.      ..++++.|+||++..+......      ....... . +.  .....+.+++|+|+
T Consensus       152 -~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  230 (281)
T 3zv4_A          152 -GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTG  230 (281)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSH
T ss_pred             -CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHH
Confidence             25699999998877652      2499999999999876422100      0000000 0 00  01123578999999


Q ss_pred             HHHHHhcCcc---cCCceEEecc
Q 046297          289 VCIQALQFEE---AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~---~~~~~~~i~~  308 (331)
                      +++.++.++.   ..|+++++.+
T Consensus       231 ~v~fL~s~~~~~~itG~~i~vdG  253 (281)
T 3zv4_A          231 AYVFFATRGDSLPATGALLNYDG  253 (281)
T ss_dssp             HHHHHHSTTTSTTCSSCEEEESS
T ss_pred             HHHHhhcccccccccCcEEEECC
Confidence            9999998433   4789999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.83  E-value=3e-20  Score=162.72  Aligned_cols=205  Identities=14%  Similarity=0.019  Sum_probs=137.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      +++||||||+|+||++++++|+++  |++|++++|++++.+.+      ...+..+     |++++.++++       ++
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            367999999999999999999999  99999999987654432      1223222     4455554443       79


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||...... .+.....+++       ...+++|+.++.++++++    ++.+.++||++||..+.....+    
T Consensus        74 D~lv~nAg~~~~~~-~~~~~~~~~~-------~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  141 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQ-PIDKYAVEDY-------RGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE----  141 (254)
T ss_dssp             CEEEEECCCCCCCC-CGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT----
T ss_pred             CEEEECCCcCCCCC-ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC----
Confidence            99999999741111 0111111122       233488999988877766    3556789999999877543322    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch---hhhhccCC-------ccccCCcccccCHHHHH
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI---RELLVGKD-------DELLQTETRTIARADVA  287 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~-------~~~~~~~~~~i~v~Dva  287 (331)
                       ...|..+|...+.+.+       ..++++++++||+++|+....   ..+.....       ...+  ...+.+++|+|
T Consensus       142 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p--~~~~~~p~dvA  218 (254)
T 1zmt_A          142 -LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA--LQRLGTQKELG  218 (254)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS--SSSCBCHHHHH
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC--CCCCcCHHHHH
Confidence             2569999999887665       358999999999997654210   01111100       0011  12367899999


Q ss_pred             HHHHHHhcCcc--cCCceEEecc
Q 046297          288 EVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++++.++.++.  ..|+.+++.+
T Consensus       219 ~~v~~l~s~~~~~~tG~~~~vdg  241 (254)
T 1zmt_A          219 ELVAFLASGSCDYLTGQVFWLAG  241 (254)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEEST
T ss_pred             HHHHHHhCcccCCccCCEEEECC
Confidence            99999987653  4688999987

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.83  E-value=3.1e-20  Score=160.31  Aligned_cols=211  Identities=15%  Similarity=0.071  Sum_probs=149.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hh---hcCCCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQ---KIGGADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~---~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      .++|++|||||+++||+.+++.|+++  |++|++.+|+..+  .+   +...+...+++|++|++.++++++  ++|++|
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV   84 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            35789999999999999999999999  9999999998642  12   233457899999999998888776  699999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcC-CCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAG-AKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~-vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      ||||.....  .+...+.++|+..       +++|+.++..+.++    +++.+ -.+||++||..+......     ..
T Consensus        85 NNAGi~~~~--~~~~~~~~~w~~~-------~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~-----~~  150 (247)
T 4hp8_A           85 NNAGIIRRA--DSVEFSELDWDEV-------MDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR-----VP  150 (247)
T ss_dssp             ECCCCCCCC--CGGGCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS-----CH
T ss_pred             ECCCCCCCC--CcccccHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC-----Ch
Confidence            999975432  2223333344444       48999987776665    44444 469999999877543322     25


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh----hhccCCccccCCcccccCHHHHHHHHHHHhcC
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE----LLVGKDDELLQTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                      .|..+|..+..+.+       .+|++++.|.||++..+......    ........+|-  ..+-.++|+|.+++.+..+
T Consensus       151 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl--gR~g~peeiA~~v~fLaSd  228 (247)
T 4hp8_A          151 SYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPA--GRWGHSEDIAGAAVFLSSA  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTT--SSCBCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCC--CCCcCHHHHHHHHHHHhCc
Confidence            69999999887665       47999999999999876432100    00000011121  1246789999999998876


Q ss_pred             cc--cCCceEEecc
Q 046297          297 EE--AKFKAFDLAS  308 (331)
Q Consensus       297 ~~--~~~~~~~i~~  308 (331)
                      ..  ..|+++.+.+
T Consensus       229 ~a~~iTG~~i~VDG  242 (247)
T 4hp8_A          229 AADYVHGAILNVDG  242 (247)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             hhcCCcCCeEEECc
Confidence            54  4688888886

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.83  E-value=1.9e-20  Score=162.93  Aligned_cols=209  Identities=12%  Similarity=-0.004  Sum_probs=137.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-e--cCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-V--RTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~--R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      ++++|||||+|+||++++++|+++  |++|+++ +  |++++.+.+...+  ..+|+.|++++.++++       ++|+|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAAERQRFESEN--PGTIALAEQKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHS--TTEEECCCCCGGGHHHHHGGGSSCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHHHHHHHHHHh--CCCcccCHHHHHHHHHHHHHHcCCCCEE
Confidence            368999999999999999999999  9999999 6  9876655432212  0122234444443332       68999


Q ss_pred             EEcccCCCCCC-CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          152 IILTSAVPKMK-PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       152 i~~ag~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      |||||...... ..+.....++++       ..+++|+.++..+++++.    +.+.++||++||..+.......     
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~-------~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----  144 (244)
T 1zmo_A           77 VSNDYIPRPMNRLPLEGTSEADIR-------QMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYN-----  144 (244)
T ss_dssp             EECCCCCTTGGGCCSTTCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTC-----
T ss_pred             EECCCcCCCCCCCCcccCCHHHHH-------HHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCc-----
Confidence            99999743200 011111222222       334889999888777664    5567899999998765433222     


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCc---chh---hhhccCCc-cccCCcccccCHHHHHHHHHH
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEG---GIR---ELLVGKDD-ELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~---~~~---~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      ..|..+|...+.+.+       ..++++++|+||++..+..   ...   ........ ..+  ...+.+++|+|++++.
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~pe~vA~~v~~  222 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP--LGRLGRPDEMGALITF  222 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCT--TCSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCC--CCCCcCHHHHHHHHHH
Confidence            459999999887765       3589999999999987753   210   00000000 111  1235789999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++..+.  ..|+.+.+.+
T Consensus       223 l~s~~~~~~tG~~i~vdg  240 (244)
T 1zmo_A          223 LASRRAAPIVGQFFAFTG  240 (244)
T ss_dssp             HHTTTTGGGTTCEEEEST
T ss_pred             HcCccccCccCCEEEeCC
Confidence            997653  4588888876

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.82  E-value=4.5e-20  Score=162.96  Aligned_cols=213  Identities=13%  Similarity=0.021  Sum_probs=147.3

Q ss_pred             CCCCeEEEECC--CChhHHHHHHHHHhcCCCCeEEEEecCCchh-hh----cCCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGA--GGRTGQIVYKKLKERSEQYAARGLVRTEESK-QK----IGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGa--tG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~----l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +.+++||||||  +|+||++++++|+++  |++|++++|++++. ++    +..++.++.+|++|++++.++++      
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            45688999999  999999999999999  99999999987552 33    23457899999999999888876      


Q ss_pred             ----CCCEEEEcccCCCCC---CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC--CCeEEEEccCCCCCC
Q 046297          147 ----GIDALIILTSAVPKM---KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG--AKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--vk~~v~~SS~~~~~~  217 (331)
                          ++|+||||||.....   ...+.....+++       ...+++|+.++..+++++...-  -.+||++||.... .
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-~  154 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV-------SKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-A  154 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHH-------HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-C
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHH-------HHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-c
Confidence                799999999975311   000111111122       2334889999999999987541  2589999987641 1


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh------h--------hhccCCccccCC
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR------E--------LLVGKDDELLQT  276 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~------~--------~~~~~~~~~~~~  276 (331)
                         .+  ....|..+|...+.+.+       ..++++++|+||++..+.....      .        .........+ .
T Consensus       155 ---~~--~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  228 (269)
T 2h7i_A          155 ---MP--AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP-I  228 (269)
T ss_dssp             ---CT--TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT-T
T ss_pred             ---cC--chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCC-c
Confidence               11  12569999999887665       3589999999999976531100      0        0000000011 1


Q ss_pred             cccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          277 ETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       277 ~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.+..++|+|++++.++.+..  ..|+.+.+.+
T Consensus       229 ~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  262 (269)
T 2h7i_A          229 GWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  262 (269)
T ss_dssp             CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             ccCCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence            1136788999999999997643  4678888886

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.82  E-value=1.9e-20  Score=164.39  Aligned_cols=211  Identities=12%  Similarity=0.072  Sum_probs=143.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHh---cCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc-
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKE---RSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~---~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      +.++++|||||+|+||++++++|++   +  |++|++++|++++.+++         ...+.++.+|++|++++.++++ 
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcC--CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            3467899999999999999999999   8  99999999987654432         2347889999999998887763 


Q ss_pred             --------CCC--EEEEcccCCCCCCCCCCC-CCCCCCccccccCCCcceehHHHHHHHHHHHHHc------CCCeEEEE
Q 046297          147 --------GID--ALIILTSAVPKMKPDFDP-AKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA------GAKQIVLV  209 (331)
Q Consensus       147 --------~~d--~Vi~~ag~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~------~vk~~v~~  209 (331)
                              ++|  +||||||........+.. ...+++       ...+++|+.++.++++++...      +..+||++
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~-------~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~i  154 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV-------NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNI  154 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHH-------HHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEE
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEE
Confidence                    368  999999974321100101 111222       234489999999999988654      23479999


Q ss_pred             ccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH----h-cCCCEEEEecCcccCCCcchhhhhc--cCCc---cccC--Cc
Q 046297          210 GSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA----D-SGIPYTIIRAGGLQDKEGGIRELLV--GKDD---ELLQ--TE  277 (331)
Q Consensus       210 SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~-~~~~~~ilrp~~v~g~~~~~~~~~~--~~~~---~~~~--~~  277 (331)
                      ||..+..+..+     ...|..+|...+.+.+    + .+++++.++||++..+...  ....  ....   .+..  ..
T Consensus       155 sS~~~~~~~~~-----~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~~p~  227 (259)
T 1oaa_A          155 SSLCALQPYKG-----WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQ--LARETSKDPELRSKLQKLKSD  227 (259)
T ss_dssp             CCGGGTSCCTT-----CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHH--HHHHHCSCHHHHHHHHHHHHT
T ss_pred             cCchhcCCCCC-----ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHH--HHhhccCChhHHHHHHHhhhc
Confidence            99887543322     2569999999987765    2 2488999999998765321  1100  0000   0000  01


Q ss_pred             ccccCHHHHHHHHHHHhcCcc-cCCceEEe
Q 046297          278 TRTIARADVAEVCIQALQFEE-AKFKAFDL  306 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~~-~~~~~~~i  306 (331)
                      ..+.+++|+|++++.++.... ..|+.+++
T Consensus       228 ~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          228 GALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             TCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence            236799999999999987533 34555554

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.82  E-value=2.5e-20  Score=162.29  Aligned_cols=206  Identities=15%  Similarity=0.127  Sum_probs=126.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCccc---HHHHh---cCCCEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNS---IIPAI---QGIDAL  151 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~---~~~~l---~~~d~V  151 (331)
                      +.+++||||||+|+||++++++|++   |+.|++++|++++.+.+.  .++.++.+|+.+.+.   +.+.+   .++|+|
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence            3468899999999999999999964   688999999987665543  347889999987633   22222   368999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||......  +.....+++       ...+++|+.++..+++++    ++.+ .+||++||..+..+..+     ..
T Consensus        80 v~~Ag~~~~~~--~~~~~~~~~-------~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-----~~  144 (245)
T 3e9n_A           80 VHAAAVARDTT--IEAGSVAEW-------HAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPG-----NT  144 (245)
T ss_dssp             EECC------------CHHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------CH
T ss_pred             EECCCcCCCCc--hhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCC-----ch
Confidence            99999753311  111111112       233488998876666655    4445 79999999877543322     25


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccC
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAK  300 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~  300 (331)
                      .|+.+|...+.+.+       ..++++++++||++.++....  .........  ....+++++|+|++++.+++.+. .
T Consensus       145 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~--~~~~~~~p~dvA~~i~~l~~~~~-~  219 (245)
T 3e9n_A          145 IYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG--LMDSQGTNF--RPEIYIEPKEIANAIRFVIDAGE-T  219 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCGGGSCHHHHHHHHHHHHTSCT-T
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh--hhhhhhccc--ccccCCCHHHHHHHHHHHHcCCC-c
Confidence            79999999987765       368999999999998875321  111111111  12346899999999999998775 4


Q ss_pred             CceEEecc
Q 046297          301 FKAFDLAS  308 (331)
Q Consensus       301 ~~~~~i~~  308 (331)
                      +.++++.-
T Consensus       220 ~~~~~i~~  227 (245)
T 3e9n_A          220 TQITNVDV  227 (245)
T ss_dssp             EEEEEEEE
T ss_pred             cceeeeEE
Confidence            56888764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.82  E-value=3e-19  Score=156.48  Aligned_cols=216  Identities=16%  Similarity=0.119  Sum_probs=146.4

Q ss_pred             cCCCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------C-CCCcEEEccCCCcccHHHHhc--
Q 046297           79 SMAKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------G-GADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~-~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      +.++|++|||||+|  +||+++++.|+++  |++|++.+|+++..+++       . .++.++++|++|++++.++++  
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            45689999999887  8999999999999  99999999997654432       2 257889999999998887775  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~  219 (331)
                           ++|++|||||.......     .....+..+++.....++|+.+...+..++...  +-.+||++||..+.....
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~-----~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~  155 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDL-----RGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ  155 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGG-----TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT
T ss_pred             HHHhCCCCEEEecccccccccc-----ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc
Confidence                 69999999997543210     000001111111122366777777777666543  224899999988754332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      .     ...|..+|..++.+.+       .+|++++.|.||++..+....    ...........|-  ..+..++|||+
T Consensus       156 ~-----~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl--~R~g~peevA~  228 (256)
T 4fs3_A          156 N-----YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPL--KRNVDQVEVGK  228 (256)
T ss_dssp             T-----THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT--SSCCCHHHHHH
T ss_pred             c-----chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCC--CCCcCHHHHHH
Confidence            2     2569999999887655       478999999999997754211    1111111111111  12468999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.+..  ..|+++.+.+
T Consensus       229 ~v~fL~Sd~a~~iTG~~i~VDG  250 (256)
T 4fs3_A          229 TAAYLLSDLSSGVTGENIHVDS  250 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhcCccCCEEEECc
Confidence            9999887654  4688888876

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.81  E-value=4.3e-20  Score=167.61  Aligned_cols=201  Identities=20%  Similarity=0.184  Sum_probs=137.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------------CCCCcEEEccCCCcccHHHHhcC-
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------------GGADDLFIGDIRDSNSIIPAIQG-  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------------~~~~~~v~~Dl~d~~~~~~~l~~-  147 (331)
                      +++||||||+|+||++++++|+++  |++|+++.|+..+.+..             ..++.++.+|++|++++.++++. 
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~--G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            467999999999999999999999  99999888865433211             13578899999999999998874 


Q ss_pred             ----CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCC
Q 046297          148 ----IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       148 ----~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~  219 (331)
                          +|+||||||.....  .+.....+++       ...+++|+.++.++++++    ++.+.++||++||..+.....
T Consensus        80 ~~g~iD~lVnnAG~~~~~--~~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~  150 (327)
T 1jtv_A           80 TEGRVDVLVCNAGLGLLG--PLEALGEDAV-------ASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP  150 (327)
T ss_dssp             TTSCCSEEEECCCCCCCS--CGGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT
T ss_pred             hcCCCCEEEECCCcCCCC--chhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC
Confidence                89999999964321  0101111112       334488999988888875    556778999999987654322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----hhhccCCcc---ccC---------
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDE---LLQ---------  275 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~---~~~---------  275 (331)
                           ....|..+|..++.+.+       ..++++++|+||++.++.....     .........   ...         
T Consensus       151 -----~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
T 1jtv_A          151 -----FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV  225 (327)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             -----CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHh
Confidence                 12579999999987765       3689999999999987652110     000000000   000         


Q ss_pred             CcccccCHHHHHHHHHHHhcCcc
Q 046297          276 TETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       276 ~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      .++...+++|+|++++.++..+.
T Consensus       226 ~~~~~~~pedvA~~i~~l~~~~~  248 (327)
T 1jtv_A          226 FREAAQNPEEVAEVFLTALRAPK  248 (327)
T ss_dssp             HHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             hhhcCCCHHHHHHHHHHHHcCCC
Confidence            00112589999999999988653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.81  E-value=2.3e-19  Score=170.94  Aligned_cols=215  Identities=16%  Similarity=0.164  Sum_probs=149.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchh-------hhc---CCCCcEEEccCCCcccHHHHhcCC-
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESK-------QKI---GGADDLFIGDIRDSNSIIPAIQGI-  148 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~-------~~l---~~~~~~v~~Dl~d~~~~~~~l~~~-  148 (331)
                      .+++||||||+|+||.+++++|+++  |++ |++++|+....       +++   ..++.++.+|++|.+.+.++++++ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~  302 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG  302 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999  985 99999986421       112   234788999999999999998765 


Q ss_pred             -----CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          149 -----DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       149 -----d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                           |+|||+||......  +.       +...++....+++|+.|+.++.+++++.+.++||++||..+......   
T Consensus       303 ~~g~ld~VIh~AG~~~~~~--l~-------~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g---  370 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGT--VD-------TLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG---  370 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCC--GG-------GCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT---
T ss_pred             hcCCCcEEEECCccCCCCc--cc-------cCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC---
Confidence                 99999999743210  00       11111223344789999999999999888999999999865433222   


Q ss_pred             CCcchHHHHHHHHHHHHH---hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccC
Q 046297          224 LGNGNILVWKRKAEQYLA---DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAK  300 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~  300 (331)
                        ...|+.+|...+.+.+   ..|+++++|+||.+.+........    ...+...+..+++.+|+++++..++..+.. 
T Consensus       371 --~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~----~~~~~~~g~~~i~~e~~a~~l~~~l~~~~~-  443 (486)
T 2fr1_A          371 --LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPV----ADRFRRHGVIEMPPETACRALQNALDRAEV-  443 (486)
T ss_dssp             --CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----------------CTTTTEECBCHHHHHHHHHHHHHTTCS-
T ss_pred             --CHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchhH----HHHHHhcCCCCCCHHHHHHHHHHHHhCCCC-
Confidence              2458999999886654   579999999999998764211110    111223456789999999999999987642 


Q ss_pred             CceEEeccCCCCCCCCHHHHHHHH
Q 046297          301 FKAFDLASKPEGTGTPTKDFKALF  324 (331)
Q Consensus       301 ~~~~~i~~~~~~~~~t~~e~~~~~  324 (331)
                        .+.+..      +.+..+...+
T Consensus       444 --~~~v~~------~d~~~~~~~~  459 (486)
T 2fr1_A          444 --CPIVID------VRWDRFLLAY  459 (486)
T ss_dssp             --SCEECE------ECHHHHHHHH
T ss_pred             --eEEEEe------CCHHHHhhhh
Confidence              233332      4566665543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.80  E-value=3e-19  Score=168.59  Aligned_cols=212  Identities=14%  Similarity=0.108  Sum_probs=146.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhhc--CCCCcEEEccCCCcccHHHHhc-------C-C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQKI--GGADDLFIGDIRDSNSIIPAIQ-------G-I  148 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~l--~~~~~~v~~Dl~d~~~~~~~l~-------~-~  148 (331)
                      .++++|||||+|+||.++++.|+++  |++|++++|+...  ..++  ..++.++.+|++|.+++.++++       + +
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            5689999999999999999999999  9999999997532  2221  1136789999999999888775       3 9


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----CCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----GAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |+||||||......  +.....+++       ...+++|+.++.++.+++...    +..+||++||..+.....     
T Consensus       290 d~lV~nAGv~~~~~--~~~~~~~~~-------~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----  355 (454)
T 3u0b_A          290 DILVNNAGITRDKL--LANMDEKRW-------DAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----  355 (454)
T ss_dssp             SEEEECCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----
T ss_pred             eEEEECCcccCCCc--cccCCHHHH-------HHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----
Confidence            99999999754311  111111222       233489999999999998865    567999999987644332     


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      +...|+.+|...+.+.+       ..|+++++|+||++.++.....................+...+|+|++++.++...
T Consensus       356 g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~  435 (454)
T 3u0b_A          356 GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASPA  435 (454)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCCc
Confidence            22579999997776554       36899999999999876432110000000000011123468899999999988754


Q ss_pred             c--cCCceEEecc
Q 046297          298 E--AKFKAFDLAS  308 (331)
Q Consensus       298 ~--~~~~~~~i~~  308 (331)
                      .  ..|+++++.+
T Consensus       436 a~~itG~~i~vdG  448 (454)
T 3u0b_A          436 SNAVTGNTIRVCG  448 (454)
T ss_dssp             GTTCCSCEEEESS
T ss_pred             cCCCCCcEEEECC
Confidence            3  5688999986

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.79  E-value=5.2e-19  Score=158.89  Aligned_cols=202  Identities=12%  Similarity=0.062  Sum_probs=135.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c----CCCCcEEEccCCCc-ccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I----GGADDLFIGDIRDS-NSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l----~~~~~~v~~Dl~d~-~~~~~~l~----  146 (331)
                      ..+++||||||+|+||++++++|+++  |++|++++|+.++.++    +    ...+.++.+|++|+ +.+.++++    
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            34688999999999999999999999  9999999999765433    2    13478999999998 77766654    


Q ss_pred             ---CCCEEEEcccCCCCCCCC-----------C---------CCCCCC-CCccccccCCCcceehHHHHHHHHHHHH---
Q 046297          147 ---GIDALIILTSAVPKMKPD-----------F---------DPAKGG-RPEFYFEEGAYPEQVDWIGQKNQIDAAK---  199 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~-----------~---------~~~~~~-~p~~~~~~~~~~~~~nv~~~~~ll~aa~---  199 (331)
                         ++|+||||||........           .         ....+. ..+...+.....+++|+.|+..+++++.   
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence               799999999975321000           0         000000 0000111112234889999877777664   


Q ss_pred             -HcCCCeEEEEccCCCCCCCCC------------------------------------C--CCCCcchHHHHHHHHHHHH
Q 046297          200 -AAGAKQIVLVGSMGGTNLNHP------------------------------------L--NSLGNGNILVWKRKAEQYL  240 (331)
Q Consensus       200 -~~~vk~~v~~SS~~~~~~~~~------------------------------------~--~~~~~~~y~~sK~~~e~~~  240 (331)
                       +.+.++||++||..+......                                    .  .+.....|+.+|...+.+.
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence             446679999999865322100                                    0  0112257999999998776


Q ss_pred             H----h-cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          241 A----D-SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       241 ~----~-~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      +    + .++++++++||++.++...               .......++.++.++.++..+.
T Consensus       248 ~~la~e~~~i~v~~v~PG~v~T~~~~---------------~~~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          248 RVLANKIPKFQVNCVCPGLVKTEMNY---------------GIGNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHCTTSEEEEECCCSBCSGGGT---------------TCCSBCHHHHHHHHHHHHTCCS
T ss_pred             HHHHhhcCCceEEEecCCceecCCcC---------------CCCCCCHHHHHHHHHHHHhCCC
Confidence            5    2 3689999999999776321               1123688999999999887654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.79  E-value=1.6e-19  Score=163.28  Aligned_cols=203  Identities=16%  Similarity=0.117  Sum_probs=137.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec---------CCchhhh----cCCCCcEEEccCCCcccHHHHhc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR---------TEESKQK----IGGADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R---------~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      +.+++||||||+|+||+++++.|+++  |++|++++|         +.++.+.    +......+.+|+.|.+++.++++
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~--Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence            45688999999999999999999999  999999754         4443332    22122345689999987766653


Q ss_pred             -------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCC
Q 046297          147 -------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGT  215 (331)
Q Consensus       147 -------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~  215 (331)
                             ++|+||||||.....  .+......++       ...+++|+.|+.++++++    ++.+.++||++||..+.
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~--~~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~  155 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDR--SFSRISDEDW-------DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  155 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCC--CGGGCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCC--ChhhCCHHHH-------HHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence                   699999999974321  0111111222       233488999987777765    55677899999997543


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHH
Q 046297          216 NLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       216 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      ....     ....|+.+|...+.+.+       ..|+++++|+||.+ .+...  ...       +.....+++++|+|.
T Consensus       156 ~~~~-----~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~--~~~-------~~~~~~~~~p~dvA~  220 (319)
T 1gz6_A          156 YGNF-----GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE--TVM-------PEDLVEALKPEYVAP  220 (319)
T ss_dssp             HCCT-----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG--GGS-------CHHHHHHSCGGGTHH
T ss_pred             cCCC-----CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc--ccC-------ChhhhccCCHHHHHH
Confidence            3222     22579999999887665       35899999999987 33211  100       011123578999999


Q ss_pred             HHHHHhcCcc-cCCceEEecc
Q 046297          289 VCIQALQFEE-AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~-~~~~~~~i~~  308 (331)
                      +++.++..+. ..|+.|++.+
T Consensus       221 ~~~~l~s~~~~~tG~~~~v~G  241 (319)
T 1gz6_A          221 LVLWLCHESCEENGGLFEVGA  241 (319)
T ss_dssp             HHHHHTSTTCCCCSCEEEEET
T ss_pred             HHHHHhCchhhcCCCEEEECC
Confidence            9999987654 3577787753

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.79  E-value=1e-18  Score=167.07  Aligned_cols=216  Identities=15%  Similarity=0.143  Sum_probs=151.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCch---h----hhc---CCCCcEEEccCCCcccHHHHhcC--
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEES---K----QKI---GGADDLFIGDIRDSNSIIPAIQG--  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~---~----~~l---~~~~~~v~~Dl~d~~~~~~~l~~--  147 (331)
                      .+++||||||+|+||.+++++|+++  |+ +|++++|+...   .    +++   ..++.++.+|++|.+.+.+++++  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~  335 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP  335 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence            4678999999999999999999999  99 58899998632   1    112   23478899999999999999975  


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      +|+||||||......  +.       +...+.....+++|+.++.++.++++.. +.++||++||..+.....     +.
T Consensus       336 ld~VVh~AGv~~~~~--~~-------~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~-----g~  401 (511)
T 2z5l_A          336 PNAVFHTAGILDDAV--ID-------TLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA-----GQ  401 (511)
T ss_dssp             CSEEEECCCCCCCBC--GG-------GCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT-----TB
T ss_pred             CcEEEECCcccCCcc--cc-------cCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC-----CC
Confidence            999999999743210  00       0111111233478999999999998876 788999999986543322     23


Q ss_pred             chHHHHHHHHHHHHH---hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCce
Q 046297          227 GNILVWKRKAEQYLA---DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKA  303 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~  303 (331)
                      ..|+.+|...+.+.+   ..|+++++|+||.+.+.........    ..+...+..+++.+|+++++..++..+..   .
T Consensus       402 ~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~----~~~~~~g~~~l~~e~~a~~l~~al~~~~~---~  474 (511)
T 2z5l_A          402 GAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAGE----ESLSRRGLRAMDPDAAVDALLGAMGRNDV---C  474 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHH----HHHHHHTBCCBCHHHHHHHHHHHHHHTCS---E
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCcccccccH----HHHHhcCCCCCCHHHHHHHHHHHHhCCCC---E
Confidence            679999999987765   5799999999998843321100000    00112245679999999999999986532   2


Q ss_pred             EEeccCCCCCCCCHHHHHHHHH
Q 046297          304 FDLASKPEGTGTPTKDFKALFS  325 (331)
Q Consensus       304 ~~i~~~~~~~~~t~~e~~~~~~  325 (331)
                      +.+..      +.+..+...+.
T Consensus       475 v~v~~------~d~~~~~~~~~  490 (511)
T 2z5l_A          475 VTVVD------VDWERFAPATN  490 (511)
T ss_dssp             EEECC------BCHHHHHHHHH
T ss_pred             EEEEe------CCHHHHHhhhc
Confidence            33443      46666665543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.76  E-value=8e-18  Score=150.59  Aligned_cols=214  Identities=10%  Similarity=0.027  Sum_probs=137.2

Q ss_pred             CCCCeEEEECCC--ChhHHHHHHHHHhcCCCCeEEEEecCC-----------chhhhc---CCC-----CcEEEcc----
Q 046297           80 MAKSTVLVTGAG--GRTGQIVYKKLKERSEQYAARGLVRTE-----------ESKQKI---GGA-----DDLFIGD----  134 (331)
Q Consensus        80 ~~~~~VlVtGat--G~iG~~l~~~Ll~~~~g~~V~~l~R~~-----------~~~~~l---~~~-----~~~v~~D----  134 (331)
                      +.++++|||||+  |+||++++++|+++  |++|++++|++           ++.+++   ...     ...+.+|    
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            346789999999  99999999999999  99999998642           122111   110     1233333    


Q ss_pred             ----CC----C--------cccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHH
Q 046297          135 ----IR----D--------SNSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQ  191 (331)
Q Consensus       135 ----l~----d--------~~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~  191 (331)
                          +.    |        ++++.++++       ++|+||||||........+.....++++       ..+++|+.++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~-------~~~~vN~~g~  156 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYL-------AAISASSYSF  156 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHH-------HHHHHHTHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHH-------HHHHHhhhHH
Confidence                22    2        556666554       6899999998642111111111222222       3348999999


Q ss_pred             HHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH--------hcCCCEEEEecCcccCCCcc
Q 046297          192 KNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA--------DSGIPYTIIRAGGLQDKEGG  261 (331)
Q Consensus       192 ~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~~~~~ilrp~~v~g~~~~  261 (331)
                      ..+++++...  .-++||++||..+.......    ...|+.+|...+.+.+        +.|+++++|+||++.++...
T Consensus       157 ~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~----~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~  232 (297)
T 1d7o_A          157 VSLLSHFLPIMNPGGASISLTYIASERIIPGY----GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK  232 (297)
T ss_dssp             HHHHHHHGGGEEEEEEEEEEECGGGTSCCTTC----TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred             HHHHHHHHHHhccCceEEEEeccccccCCCCc----chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhh
Confidence            9999998754  12589999998764432211    0359999999886654        26899999999999987532


Q ss_pred             h----hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          262 I----RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       262 ~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .    ...........+  ...+.+++|+|++++.++....  ..|+.+++.+
T Consensus       233 ~~~~~~~~~~~~~~~~p--~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdg  283 (297)
T 1d7o_A          233 AIGFIDTMIEYSYNNAP--IQKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             CCSHHHHHHHHHHHHSS--SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hccccHHHHHHhhccCC--CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            1    010000000011  1235789999999999887543  4688999987

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.74  E-value=1.1e-17  Score=159.08  Aligned_cols=199  Identities=13%  Similarity=0.099  Sum_probs=143.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCch---hhh-------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEES---KQK-------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~---~~~-------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +++||||||+|+||.++++.|+++  |+ +|+++.|+...   ..+       ...++.++.+|++|.+.+.++++    
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            378999999999999999999999  88 78888886422   111       23358899999999999999886    


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                        ++|+||||||...... .+.....+++       ...+++|+.++.++.++++..+.++||++||..+.....     
T Consensus       317 ~g~ld~vVh~AGv~~~~~-~l~~~t~e~~-------~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~-----  383 (496)
T 3mje_A          317 DAPLTAVFHSAGVAHDDA-PVADLTLGQL-------DALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG-----  383 (496)
T ss_dssp             TSCEEEEEECCCCCCSCC-CTTTCCHHHH-------HHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT-----
T ss_pred             hCCCeEEEECCcccCCCC-CcccCCHHHH-------HHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC-----
Confidence              4799999999752211 1111111122       334489999999999999988889999999986543332     


Q ss_pred             CcchHHHHHHHHHHHHH---hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          225 GNGNILVWKRKAEQYLA---DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      +...|+.+|...+.+.+   ..|+++++|.||.+.+.......   .....+...+...+..++.++++..++..+.
T Consensus       384 g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          384 GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDP---EVHDRLVRQGVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC---------CHHHHHTTEEEECHHHHHHHHHHHHHHTC
T ss_pred             CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccCh---HHHHHHHhcCCCCCCHHHHHHHHHHHHcCCC
Confidence            22579999999887654   57999999999988765432110   0011111234456789999999999998664

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.72  E-value=8.8e-17  Score=154.33  Aligned_cols=215  Identities=16%  Similarity=0.132  Sum_probs=148.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEE-ecCCc-------------hhhh-------cCCCCcEEEccCCCc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGL-VRTEE-------------SKQK-------IGGADDLFIGDIRDS  138 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l-~R~~~-------------~~~~-------l~~~~~~v~~Dl~d~  138 (331)
                      .++++|||||+|+||.++++.|+++  |++ |+++ +|+..             ..++       ...++.++.+|++|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~--G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARD--GAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHH--TCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHc--CCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            4678999999999999999999999  887 5555 78742             1111       233588999999999


Q ss_pred             ccHHHHhcC------CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-----CCeEE
Q 046297          139 NSIIPAIQG------IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-----AKQIV  207 (331)
Q Consensus       139 ~~~~~~l~~------~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-----vk~~v  207 (331)
                      +++.++++.      +|+||||||.....  .+.....+       +....+++|+.|+.++.+++....     .++||
T Consensus       328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~--~~~~~~~~-------~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV  398 (525)
T 3qp9_A          328 EAAARLLAGVSDAHPLSAVLHLPPTVDSE--PLAATDAD-------ALARVVTAKATAALHLDRLLREAAAAGGRPPVLV  398 (525)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCCCCCC--CTTTCCHH-------HHHHHHHHHHHHHHHHHHHHHHTC----CCCEEE
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcCCCCC--chhhCCHH-------HHHHHHHHHHHHHHHHHHHhccccccCCCCCEEE
Confidence            999999864      69999999975431  11111111       223344889999999999988765     78999


Q ss_pred             EEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH---hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHH
Q 046297          208 LVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA---DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARA  284 (331)
Q Consensus       208 ~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~  284 (331)
                      ++||..+.....     +...|+.+|...+.+.+   ..|+++++|.||.+-++... ....   ...+...+...++.+
T Consensus       399 ~~SS~a~~~g~~-----g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~-~~~~---~~~~~~~g~~~l~pe  469 (525)
T 3qp9_A          399 LFSSVAAIWGGA-----GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVT-EGAT---GERLRRLGLRPLAPA  469 (525)
T ss_dssp             EEEEGGGTTCCT-----TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGG-SSHH---HHHHHHTTBCCBCHH
T ss_pred             EECCHHHcCCCC-----CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcccccccc-chhh---HHHHHhcCCCCCCHH
Confidence            999987654332     23679999999998875   36899999999999332210 0000   001112234568999


Q ss_pred             HHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHH
Q 046297          285 DVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALF  324 (331)
Q Consensus       285 Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~  324 (331)
                      ++++++..++..+..   ...+..      +.+..+...+
T Consensus       470 e~a~~l~~~l~~~~~---~v~v~~------~dw~~~~~~~  500 (525)
T 3qp9_A          470 TALTALDTALGHGDT---AVTIAD------VDWSSFAPGF  500 (525)
T ss_dssp             HHHHHHHHHHHHTCS---EEEECC------BCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCC---eEEEEe------CCHHHHHhhc
Confidence            999999999987632   222332      4566665544

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.70  E-value=2.6e-17  Score=161.06  Aligned_cols=225  Identities=15%  Similarity=0.064  Sum_probs=144.8

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec---------CCchhhh----cCCCCcEEEccCCCcccHHHHh
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR---------TEESKQK----IGGADDLFIGDIRDSNSIIPAI  145 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R---------~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l  145 (331)
                      +..++++|||||+|+||+++++.|+++  |++|++++|         +.+..+.    +......+.+|+.|.+++.+++
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAER--GAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVI   93 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHH
Confidence            445789999999999999999999999  999999988         3333322    2222233458999999888877


Q ss_pred             c-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCC
Q 046297          146 Q-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGG  214 (331)
Q Consensus       146 ~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~  214 (331)
                      +       ++|+||||||.....  .+.....++++.       .+++|+.|+.++++++    ++.+..+||++||..+
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~--~~~~~~~~~~~~-------~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~  164 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDR--SLVKTSEQDWNL-------VNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSG  164 (613)
T ss_dssp             C----------CEECCCCCCCCC--CSTTCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHH
T ss_pred             HHHHHHCCCCcEEEECCCCCCCC--CcccCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            6       589999999975431  111222223333       3489999988887776    5556679999999866


Q ss_pred             CCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHH
Q 046297          215 TNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVA  287 (331)
Q Consensus       215 ~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  287 (331)
                      .....     ....|+.+|...+.+.+       ..|+++++|.||.+....       .+..   ..........+|+|
T Consensus       165 ~~~~~-----~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~-------~~~~---~~~~~~~~~pedvA  229 (613)
T 3oml_A          165 IYGNF-----GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMT-------EGIL---PDILFNELKPKLIA  229 (613)
T ss_dssp             HHCCT-----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------CCCC---CHHHHTTCCGGGTH
T ss_pred             cCCCC-----CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhh-------hhcc---chhhhhcCCHHHHH
Confidence            43322     22569999999887665       368999999999652211       1100   01112346889999


Q ss_pred             HHHHHHhcCcc-cCCceEEeccC---------CC--------CCCCCHHHHHHHHHHhhc
Q 046297          288 EVCIQALQFEE-AKFKAFDLASK---------PE--------GTGTPTKDFKALFSQITT  329 (331)
Q Consensus       288 ~~~~~~l~~~~-~~~~~~~i~~~---------~~--------~~~~t~~e~~~~~~~~~g  329 (331)
                      .+++.++.... ..|+.+++.++         ..        +...+.+++.+.++++..
T Consensus       230 ~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~  289 (613)
T 3oml_A          230 PVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTD  289 (613)
T ss_dssp             HHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTC
T ss_pred             HHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhc
Confidence            99999887653 35677776431         00        123577777777777643

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.70  E-value=9.7e-17  Score=144.75  Aligned_cols=212  Identities=13%  Similarity=0.078  Sum_probs=135.7

Q ss_pred             CCCCeEEEECC--CChhHHHHHHHHHhcCCCCeEEEEecCC-----------chhh---hcCCC-----CcEEEccC---
Q 046297           80 MAKSTVLVTGA--GGRTGQIVYKKLKERSEQYAARGLVRTE-----------ESKQ---KIGGA-----DDLFIGDI---  135 (331)
Q Consensus        80 ~~~~~VlVtGa--tG~iG~~l~~~Ll~~~~g~~V~~l~R~~-----------~~~~---~l~~~-----~~~v~~Dl---  135 (331)
                      +.++++|||||  +|+||++++++|+++  |++|++++|++           ++.+   ++...     ..++.+|+   
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASA--GARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTT--TCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHC--CCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            34688999999  899999999999999  99999998753           1111   11111     34555543   


Q ss_pred             ---------C--------CcccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHH
Q 046297          136 ---------R--------DSNSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQ  191 (331)
Q Consensus       136 ---------~--------d~~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~  191 (331)
                               +        |++++.++++       ++|+||||||........+.....++++       ..+++|+.++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~-------~~~~~N~~g~  157 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYL-------AASSNSAYSF  157 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHH-------HHHHHHTHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHH-------HHHhhhhHHH
Confidence                     3        2556666554       6899999999643111111111122222       3348899999


Q ss_pred             HHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH--------hcCCCEEEEecCcccCCCcc
Q 046297          192 KNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA--------DSGIPYTIIRAGGLQDKEGG  261 (331)
Q Consensus       192 ~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~~~~~ilrp~~v~g~~~~  261 (331)
                      ..+++++...  .-++||++||..+.......    ...|+.+|...+.+.+        ..|+++++|+||++..+...
T Consensus       158 ~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~----~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~  233 (315)
T 2o2s_A          158 VSLLQHFGPIMNEGGSAVTLSYLAAERVVPGY----GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAAS  233 (315)
T ss_dssp             HHHHHHHSTTEEEEEEEEEEEEGGGTSCCTTC----CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHH
T ss_pred             HHHHHHHHHHHhcCCEEEEEecccccccCCCc----cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhh
Confidence            9999988653  11589999998764332211    0259999998876553        26899999999999765311


Q ss_pred             hhhhhccCC------------ccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          262 IRELLVGKD------------DELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       262 ~~~~~~~~~------------~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                        .......            ...+  ...+..++|+|++++.++....  ..|+.+.+.+
T Consensus       234 --~~~~~~~~~~~~~~~~~~~~~~p--~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  290 (315)
T 2o2s_A          234 --AIGKSGEKSFIDYAIDYSYNNAP--LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDN  290 (315)
T ss_dssp             --HTTCSSSSCHHHHHHHHHHHHSS--SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             --hccccccchhHHHHHHHHhccCC--CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECC
Confidence              0000000            0011  1135689999999999987543  4678888876

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.69  E-value=1.2e-16  Score=144.42  Aligned_cols=216  Identities=11%  Similarity=0.057  Sum_probs=120.5

Q ss_pred             CCCCeEEEECC--CChhHHHHHHHHHhcCCCCeEEEEecCC-----------chhhh---------------cCC-----
Q 046297           80 MAKSTVLVTGA--GGRTGQIVYKKLKERSEQYAARGLVRTE-----------ESKQK---------------IGG-----  126 (331)
Q Consensus        80 ~~~~~VlVtGa--tG~iG~~l~~~Ll~~~~g~~V~~l~R~~-----------~~~~~---------------l~~-----  126 (331)
                      +.++++|||||  +|+||+++++.|+++  |++|++++|++           ++.+.               +..     
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAA--GARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHT--TCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            34678999999  899999999999999  99999998642           11111               000     


Q ss_pred             -CCcEEEccC------------CC--------cccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccc
Q 046297          127 -ADDLFIGDI------------RD--------SNSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFE  178 (331)
Q Consensus       127 -~~~~v~~Dl------------~d--------~~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~  178 (331)
                       ...++.+|+            +|        ++++.++++       ++|+||||||........+.....++++    
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~----  160 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYL----  160 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHH----
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHH----
Confidence             024444443            32        345665554       6899999999642111111111122222    


Q ss_pred             cCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------h-cCCCEE
Q 046297          179 EGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------D-SGIPYT  248 (331)
Q Consensus       179 ~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~~~~~  248 (331)
                         ..+++|+.++..+++++...  .-.+||++||..+.......    ...|+.+|..++.+.+       . .|++++
T Consensus       161 ---~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~----~~~Y~asKaal~~l~~~la~el~~~~gIrvn  233 (319)
T 2ptg_A          161 ---AAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGY----GGGMSSAKAALESDCRTLAFEAGRARAVRVN  233 (319)
T ss_dssp             ---HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------THHHHHHHHHHHHHHHCCEEE
T ss_pred             ---HHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCcc----chhhHHHHHHHHHHHHHHHHHhccccCeeEE
Confidence               33488999999999988754  11589999998764332211    0248889988765543       2 689999


Q ss_pred             EEecCcccCCCcchhhh-----hccCC-cccc-CCc-ccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          249 IIRAGGLQDKEGGIREL-----LVGKD-DELL-QTE-TRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       249 ilrp~~v~g~~~~~~~~-----~~~~~-~~~~-~~~-~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+||++..+.......     ..... ..+. ... ..+..++|+|++++.++....  ..|+.+.+.+
T Consensus       234 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG  303 (319)
T 2ptg_A          234 CISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN  303 (319)
T ss_dssp             EEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             EEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence            99999998764221000     00000 0000 001 135689999999999987643  4688898887

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.69  E-value=2.5e-16  Score=142.95  Aligned_cols=164  Identities=14%  Similarity=0.061  Sum_probs=112.8

Q ss_pred             CCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCC---------chhhh----c---C---CCCcEEEccCCCc--
Q 046297           82 KSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTE---------ESKQK----I---G---GADDLFIGDIRDS--  138 (331)
Q Consensus        82 ~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~---------~~~~~----l---~---~~~~~v~~Dl~d~--  138 (331)
                      ++++|||||++  +||++++++|+++  |++|++.+|++         ++.+.    .   .   ..+.++.+|+.+.  
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~--G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   79 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA   79 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccch
Confidence            57899999875  9999999999999  99999776543         21111    1   1   1157788888877  


Q ss_pred             c------------------cHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH
Q 046297          139 N------------------SIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN  193 (331)
Q Consensus       139 ~------------------~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~  193 (331)
                      +                  ++.++++       ++|++|||||........+......++       ...+++|+.++..
T Consensus        80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~-------~~~~~vN~~g~~~  152 (329)
T 3lt0_A           80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGY-------LDALSKSSYSLIS  152 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHH-------HHHHHHHTHHHHH
T ss_pred             hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHH-------HHHHHHHhHHHHH
Confidence            6                  6766654       689999999963211111111222222       3344899999999


Q ss_pred             HHHHHHHcC--CCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------h-cCCCEEEEecCcccCC
Q 046297          194 QIDAAKAAG--AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------D-SGIPYTIIRAGGLQDK  258 (331)
Q Consensus       194 ll~aa~~~~--vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~~~~~ilrp~~v~g~  258 (331)
                      +.+++...-  -.+||++||..+..+.....    ..|..+|...+.+.+       . .++++++|.||++..+
T Consensus       153 l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~----~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          153 LCKYFVNIMKPQSSIISLTYHASQKVVPGYG----GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             HHHHHGGGEEEEEEEEEEECGGGTSCCTTCT----TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             HHHHHHHHHhhCCeEEEEeCccccCCCCcch----HHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            988876431  15899999987654332211    159999999876654       4 6999999999999765

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.66  E-value=2.9e-17  Score=148.91  Aligned_cols=159  Identities=18%  Similarity=0.154  Sum_probs=115.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-------eEEEEecCCc--hhh----hcCC-CCcEEEccCCCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-------AARGLVRTEE--SKQ----KIGG-ADDLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-------~V~~l~R~~~--~~~----~l~~-~~~~v~~Dl~d~~~~~~~l~~  147 (331)
                      .|+|+||||+||||++++..|+++  |+       +|+++++.+.  +..    .+.+ ...++ +|+.+.+++.+++++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~   80 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKD   80 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCC
Confidence            368999999999999999999998  76       8999998641  111    1222 23444 788888888999999


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CC-eEEEEccCCC-----CCCCC-
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AK-QIVLVGSMGG-----TNLNH-  219 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk-~~v~~SS~~~-----~~~~~-  219 (331)
                      +|+|||+||.....        ..++...+       +.|+.++.++++++++++ .+ +|+++|+...     ..+.. 
T Consensus        81 ~D~Vih~Ag~~~~~--------~~~~~~~~-------~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           81 ADYALLVGAAPRKA--------GMERRDLL-------QVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             CSEEEECCCCCCCT--------TCCHHHHH-------HHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             CCEEEECCCcCCCC--------CCCHHHHH-------HHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcC
Confidence            99999999974321        12333344       889999999999999986 65 7777776431     11111 


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCc
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEG  260 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~  260 (331)
                      +.++  .+.|+.+|...|++..    .++++.+++||+++||++.
T Consensus       146 ~~~p--~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          146 GLNP--RNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             TSCG--GGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             CCCh--hheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            1211  2457788888887653    5699999999999999875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.63  E-value=2.3e-15  Score=146.80  Aligned_cols=225  Identities=19%  Similarity=0.160  Sum_probs=146.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-ch-hhhc---CCCCcEEEccC-CCcccHH-HH---hcCC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ES-KQKI---GGADDLFIGDI-RDSNSII-PA---IQGI  148 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~-~~~l---~~~~~~v~~Dl-~d~~~~~-~~---l~~~  148 (331)
                      +..+++++||||+++||+++++.|+++  |++|++.+|.. +. .+++   ...+..+.+|+ .+.+.+. ++   +.++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKY--GAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHC--CCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            345788999999999999999999999  99999998643 21 1222   22355667888 5544332 22   2379


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |++|||||.....  .+...+.++++..       +++|+.|+..+.+++    ++.+-.+||++||..+.....     
T Consensus       397 DiLVnNAGi~~~~--~~~~~~~~~~~~~-------~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~-----  462 (604)
T 2et6_A          397 DILVNNAGILRDR--SFAKMSKQEWDSV-------QQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF-----  462 (604)
T ss_dssp             CEEEECCCCCCCB--CTTTCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-----
T ss_pred             CEEEECCCCCCCC--ChhhCCHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----
Confidence            9999999975321  1222222333333       489998877666654    455556999999986643321     


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      ....|+.+|..+..+.+       .+|++++.|.||. ..+..  .... .      .........+|+|.+++.++...
T Consensus       463 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~--~~~~-~------~~~~~~~~pe~vA~~v~~L~s~~  532 (604)
T 2et6_A          463 GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMT--LSIM-R------EQDKNLYHADQVAPLLVYLGTDD  532 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccc--cccC-c------hhhccCCCHHHHHHHHHHHhCCc
Confidence            22569999999876654       4789999999994 32221  1110 0      01123458899999999888654


Q ss_pred             c-cCCceEEeccC--------------CCCCCCCHHHHHHHHHHhhc
Q 046297          298 E-AKFKAFDLASK--------------PEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       298 ~-~~~~~~~i~~~--------------~~~~~~t~~e~~~~~~~~~g  329 (331)
                      . ..|+++.+.++              +.+..++.+++.+.+.++..
T Consensus       533 ~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  579 (604)
T 2et6_A          533 VPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITD  579 (604)
T ss_dssp             CCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTC
T ss_pred             cCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhc
Confidence            3 46777777651              11245789999998887753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.61  E-value=4.1e-15  Score=145.06  Aligned_cols=223  Identities=15%  Similarity=0.099  Sum_probs=143.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC---------chhhh----cCCCCcEEEccCCCcccHHHHh-
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE---------ESKQK----IGGADDLFIGDIRDSNSIIPAI-  145 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~---------~~~~~----l~~~~~~v~~Dl~d~~~~~~~l-  145 (331)
                      +.+++++||||+++||+++++.|+++  |++|++.+|+.         +..++    +...-.-..+|+.|.+++.+++ 
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKL--GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVE   83 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHH
Confidence            34688999999999999999999999  99999998764         33222    2111112346888776555444 


Q ss_pred             ------cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCC
Q 046297          146 ------QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGT  215 (331)
Q Consensus       146 ------~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~  215 (331)
                            .++|++|||||.....  .+...+.++++.       .+++|+.|+..+.+++    ++.+-.+||++||..+.
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~--~~~~~~~~~~~~-------~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~  154 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDA--SMKKMTEKDYKL-------VIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL  154 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCB--CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCC--ChhhCCHHHHHH-------HHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence                  3699999999975321  122222233333       3489998876666554    55555699999998664


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHH
Q 046297          216 NLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       216 ~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      ....     ....|..+|..+..+.+       .+|++++.|.|+ +..+   .....  ...    ........+|+|.
T Consensus       155 ~~~~-----~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~---m~~~~--~~~----~~~~~~~pe~vA~  219 (604)
T 2et6_A          155 YGNF-----GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSR---MTESI--MPP----PMLEKLGPEKVAP  219 (604)
T ss_dssp             HCCT-----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCH---HHHTT--SCH----HHHTTCSHHHHHH
T ss_pred             CCCC-----CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCc---ccccc--CCh----hhhccCCHHHHHH
Confidence            3321     22569999999886654       478999999997 3211   11100  000    0112368999999


Q ss_pred             HHHHHhcCcc-cCCceEEeccC---------------CCCCCCCHHHHHHHHHHhh
Q 046297          289 VCIQALQFEE-AKFKAFDLASK---------------PEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       289 ~~~~~l~~~~-~~~~~~~i~~~---------------~~~~~~t~~e~~~~~~~~~  328 (331)
                      +++.++.... ..|+++.+.++               ..+..++..++.+.+.++.
T Consensus       220 ~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  275 (604)
T 2et6_A          220 LVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEIL  275 (604)
T ss_dssp             HHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHT
T ss_pred             HHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhh
Confidence            9999887653 35677776541               0124578888888877653

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.57  E-value=1.5e-15  Score=155.75  Aligned_cols=210  Identities=16%  Similarity=0.082  Sum_probs=138.2

Q ss_pred             CCCCeEEEECCCCh-hHHHHHHHHHhcCCCCeEEEE-ecCCchhh----hc-------CCCCcEEEccCCCcccHHHHhc
Q 046297           80 MAKSTVLVTGAGGR-TGQIVYKKLKERSEQYAARGL-VRTEESKQ----KI-------GGADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~-iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~----~l-------~~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      +.++++|||||+|+ ||+++++.|+++  |++|+++ .|+.++..    ++       ...+.++.+|++|.+++.++++
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~--GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHH--TCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHC--cCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            34678999999998 999999999999  9999998 56554332    22       1236789999999999887763


Q ss_pred             -------------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc------CCCeEE
Q 046297          147 -------------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA------GAKQIV  207 (331)
Q Consensus       147 -------------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~------~vk~~v  207 (331)
                                   ++|+||||||...... .+....     ...++-...+++|+.++..++++++..      +-.+||
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~-~l~dlt-----~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIV  625 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGI-ELEHID-----SKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVIL  625 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSB-CSSSCT-----THHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCC-ChhhCC-----CCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEE
Confidence                         4899999999743210 011111     001111334589999999888887432      124899


Q ss_pred             EEccCCCCCCCCCCCCCCcchHHHHHHHHHHHH-H----hc--CCCEEEEecCcccC-CCcchhhhhccCCccccCCccc
Q 046297          208 LVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYL-A----DS--GIPYTIIRAGGLQD-KEGGIRELLVGKDDELLQTETR  279 (331)
Q Consensus       208 ~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~-~----~~--~~~~~ilrp~~v~g-~~~~~~~~~~~~~~~~~~~~~~  279 (331)
                      ++||..+...       ....|+.+|..++.+. +    +.  .++++.|.||++.+ +..........   .....+..
T Consensus       626 nISSiAG~~G-------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~---~l~~iplR  695 (1688)
T 2pff_A          626 PMSPNHGTFG-------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE---GIEKMGVR  695 (1688)
T ss_dssp             CCCSCTTTSS-------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCST---TTSSSSCC
T ss_pred             EEEChHhccC-------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHH---HHHhCCCC
Confidence            9999876543       1246999999999883 3    11  27788999999984 32111000000   01111223


Q ss_pred             ccCHHHHHHHHHHHhcCcc---cCCceEEec
Q 046297          280 TIARADVAEVCIQALQFEE---AKFKAFDLA  307 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~---~~~~~~~i~  307 (331)
                      ..+++|+|++++.++..+.   ..|+.+.+.
T Consensus       696 ~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VD  726 (1688)
T 2pff_A          696 TFSQKEMAFNLLGLLTPEVVELCQKSPVMAD  726 (1688)
T ss_dssp             CCCCCTTHHHHHHHTSTTHHHHHTTSCCCCC
T ss_pred             CCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence            4588999999999987651   246666653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.56  E-value=5.3e-15  Score=156.28  Aligned_cols=207  Identities=17%  Similarity=0.078  Sum_probs=138.8

Q ss_pred             cCCCCeEEEECCCCh-hHHHHHHHHHhcCCCCeEEEE-ecCCchhhh----c-------CCCCcEEEccCCCcccHHHHh
Q 046297           79 SMAKSTVLVTGAGGR-TGQIVYKKLKERSEQYAARGL-VRTEESKQK----I-------GGADDLFIGDIRDSNSIIPAI  145 (331)
Q Consensus        79 ~~~~~~VlVtGatG~-iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~~----l-------~~~~~~v~~Dl~d~~~~~~~l  145 (331)
                      ++.++++|||||+|+ ||.++++.|+++  |++|+++ .|+.++...    +       ...+.++.+|++|.+++.+++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~--GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            345789999999998 999999999999  9999998 466544321    2       234788999999999888776


Q ss_pred             c-------------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC------CCeE
Q 046297          146 Q-------------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG------AKQI  206 (331)
Q Consensus       146 ~-------------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~------vk~~  206 (331)
                      +             ++|+||||||...... .+....     ...++....+++|+.++..++++++...      -.+|
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~-~l~d~t-----~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~I  823 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGI-ELEHID-----SKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI  823 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCSB-CGGGCC-----HHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEE
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCC-ChhhCC-----cchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEE
Confidence            3             4899999999743210 000000     0011113345899999999988875332      2589


Q ss_pred             EEEccCCCCCCCCCCCCCCcchHHHHHHHHHHH-HH----hc--CCCEEEEecCcccC-CCcc----hhhhhccCCcccc
Q 046297          207 VLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQY-LA----DS--GIPYTIIRAGGLQD-KEGG----IRELLVGKDDELL  274 (331)
Q Consensus       207 v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~----~~--~~~~~ilrp~~v~g-~~~~----~~~~~~~~~~~~~  274 (331)
                      |++||..+...       ....|+.+|...+.+ .+    +.  .++++.|+||++.+ +...    ......       
T Consensus       824 VnISS~ag~~g-------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~-------  889 (1887)
T 2uv8_A          824 LPMSPNHGTFG-------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIE-------  889 (1887)
T ss_dssp             EEECSCTTCSS-------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHH-------
T ss_pred             EEEcChHhccC-------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHH-------
Confidence            99999876543       124699999998877 22    12  28899999999984 3211    111111       


Q ss_pred             CCcccccCHHHHHHHHHHHhcCc-c--cCCceEEec
Q 046297          275 QTETRTIARADVAEVCIQALQFE-E--AKFKAFDLA  307 (331)
Q Consensus       275 ~~~~~~i~v~Dva~~~~~~l~~~-~--~~~~~~~i~  307 (331)
                      ..+..+.+.+|+|++++.++... .  ..|+.+.+.
T Consensus       890 ~~plr~~sPEEVA~avlfLaSd~~as~iTGq~I~VD  925 (1887)
T 2uv8_A          890 KMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMAD  925 (1887)
T ss_dssp             TTSCCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEE
T ss_pred             hcCCCCCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence            11123458999999999988765 1  246677763

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.54  E-value=2.5e-14  Score=150.94  Aligned_cols=207  Identities=13%  Similarity=0.066  Sum_probs=138.1

Q ss_pred             CCCCeEEEECCCCh-hHHHHHHHHHhcCCCCeEEEEe-cCCchhh--------hc---CCCCcEEEccCCCcccHHHHhc
Q 046297           80 MAKSTVLVTGAGGR-TGQIVYKKLKERSEQYAARGLV-RTEESKQ--------KI---GGADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~-iG~~l~~~Ll~~~~g~~V~~l~-R~~~~~~--------~l---~~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      +.+++||||||+|+ ||.++++.|+++  |++|++++ |+.++..        ++   ...+.++.+|++|.+++.++++
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~--GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSG--GAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            45689999999999 999999999999  99999985 5444322        12   2347889999999999887763


Q ss_pred             -----------CCCEEEEcccCCCCCCCCCCCCC--CCCCccccccCCCcceehHHHHHHHHHHHHHc------CCCeEE
Q 046297          147 -----------GIDALIILTSAVPKMKPDFDPAK--GGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA------GAKQIV  207 (331)
Q Consensus       147 -----------~~d~Vi~~ag~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~------~vk~~v  207 (331)
                                 ++|+||||||...... .+....  .+++       ...+++|+.++..++++++..      +-.+||
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~-~l~d~t~~~e~~-------~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IV  799 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGR-EIDSIDSKSELA-------HRIMLTNLLRLLGAIKTQKKERGYETRPAQVIL  799 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTC-CTTCCCHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECC
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCC-ChhhcCcCHHHH-------HHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEE
Confidence                       4899999999743210 011111  1122       234489999988888764321      225899


Q ss_pred             EEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH----h---cCCCEEEEecCccc-CCCcchhhhhccCCccccCCccc
Q 046297          208 LVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA----D---SGIPYTIIRAGGLQ-DKEGGIRELLVGKDDELLQTETR  279 (331)
Q Consensus       208 ~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~---~~~~~~ilrp~~v~-g~~~~~~~~~~~~~~~~~~~~~~  279 (331)
                      ++||..+....       ...|+.+|..++.+.+    +   ..++++.|.||++. ++..........   .+...+..
T Consensus       800 nISS~ag~~gg-------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~---~~~~~plr  869 (1878)
T 2uv9_A          800 PLSPNHGTFGN-------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAE---GVEKLGVR  869 (1878)
T ss_dssp             EECSCSSSSSC-------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHH---HHHTTTCC
T ss_pred             EEcchhhccCC-------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHH---HHHhcCCC
Confidence            99998765441       2459999999887643    1   13889999999997 443211000000   00011223


Q ss_pred             ccCHHHHHHHHHHHhcCcc---cCCceEEe
Q 046297          280 TIARADVAEVCIQALQFEE---AKFKAFDL  306 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~---~~~~~~~i  306 (331)
                      ..+.+|+|++++.++....   ..|+.+.+
T Consensus       870 ~~sPeEVA~avlfLaSd~a~s~iTGq~I~V  899 (1878)
T 2uv9_A          870 TFSQQEMAFNLLGLMAPAIVNLCQSDPVFA  899 (1878)
T ss_dssp             CBCHHHHHHHHHHHHSHHHHHHHTTSCEEE
T ss_pred             CCCHHHHHHHHHHHhCCcccccccCcEEEE
Confidence            4589999999999886543   34677776

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.50  E-value=1.4e-14  Score=133.49  Aligned_cols=209  Identities=12%  Similarity=-0.003  Sum_probs=125.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHh-cCCCCeEEEEecCCchhh----------------h---cCCCCcEEEccCCCccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKE-RSEQYAARGLVRTEESKQ----------------K---IGGADDLFIGDIRDSNS  140 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~-~~~g~~V~~l~R~~~~~~----------------~---l~~~~~~v~~Dl~d~~~  140 (331)
                      .+|++|||||+++||.++++.|++ +  |++|++++|+.+...                .   ....+..+.+|++|++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~--GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGF--GADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHH--CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhC--CCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHH
Confidence            478899999999999999999999 9  999999999754321                1   12346788999999988


Q ss_pred             HHHHhc--------CCCEEEEcccCCCCCC--------CCCCCCCC--------------------CCCccccccCCCcc
Q 046297          141 IIPAIQ--------GIDALIILTSAVPKMK--------PDFDPAKG--------------------GRPEFYFEEGAYPE  184 (331)
Q Consensus       141 ~~~~l~--------~~d~Vi~~ag~~~~~~--------~~~~~~~~--------------------~~p~~~~~~~~~~~  184 (331)
                      +.++++        ++|++|||||......        ....+...                    .-....|   ....
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~---~~~v  214 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEI---EDTI  214 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHH---HHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHH---HHHH
Confidence            776653        5899999998621000        00001000                    0001111   0111


Q ss_pred             eehHHHHH-HHHHHHHHcCC----CeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEec
Q 046297          185 QVDWIGQK-NQIDAAKAAGA----KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRA  252 (331)
Q Consensus       185 ~~nv~~~~-~ll~aa~~~~v----k~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp  252 (331)
                      ++|..+.. .+++++.....    .++|.+||.++....   +.+....|+.+|..++.+.+       ..|++++++.|
T Consensus       215 ~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~---p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaP  291 (422)
T 3s8m_A          215 TVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW---PIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVL  291 (422)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH---HHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             HhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC---CCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEc
Confidence            23322222 44555543322    479999998764321   12222569999999887655       47999999999


Q ss_pred             CcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          253 GGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       253 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      |.+-.+.................--...-..+||++++..++.+.
T Consensus       292 G~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          292 KSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             CCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             CCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence            999877542110000000000000011234588999998887654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.49  E-value=1.6e-13  Score=125.44  Aligned_cols=202  Identities=15%  Similarity=0.042  Sum_probs=125.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHh-cCCCCeEEEEecCCchhh----------------h---cCCCCcEEEccCCCcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKE-RSEQYAARGLVRTEESKQ----------------K---IGGADDLFIGDIRDSN  139 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~-~~~g~~V~~l~R~~~~~~----------------~---l~~~~~~v~~Dl~d~~  139 (331)
                      ..+|++|||||+++||.++++.|++ +  |++|++++|+.+...                .   ....+..+.+|++|++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~--GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGC--GADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHH--CCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhc--CCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHH
Confidence            4578999999999999999999999 9  999999998754321                1   1234678899999999


Q ss_pred             cHHHHhc-------CCCEEEEcccCCCCC-----------CCCC---------------------CCCCCCCCccccccC
Q 046297          140 SIIPAIQ-------GIDALIILTSAVPKM-----------KPDF---------------------DPAKGGRPEFYFEEG  180 (331)
Q Consensus       140 ~~~~~l~-------~~d~Vi~~ag~~~~~-----------~~~~---------------------~~~~~~~p~~~~~~~  180 (331)
                      ++.++++       ++|++|||||.....           ..++                     .+...++++.     
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~-----  197 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDS-----  197 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHH-----
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHH-----
Confidence            8887775       689999999974110           0000                     0111111111     


Q ss_pred             CCcceehHHHHH-HHHHHHHHcC----CCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hc-CCCE
Q 046297          181 AYPEQVDWIGQK-NQIDAAKAAG----AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DS-GIPY  247 (331)
Q Consensus       181 ~~~~~~nv~~~~-~ll~aa~~~~----vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~-~~~~  247 (331)
                        ++++|..+.. .+++++....    -.++|.+||.++....   +.+....|+.+|..++.+.+       .. |+++
T Consensus       198 --~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~---p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRV  272 (405)
T 3zu3_A          198 --TVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH---DIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDA  272 (405)
T ss_dssp             --HHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT---TTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEE
T ss_pred             --HHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC---CCccchHHHHHHHHHHHHHHHHHHHhCcccCeEE
Confidence              1244444333 3445443322    1489999998764322   22322469999999887655       46 8999


Q ss_pred             EEEecCcccCCCcchhhhhccCCc---cccCCcccccCHHHHHHHHHHHhcC
Q 046297          248 TIIRAGGLQDKEGGIRELLVGKDD---ELLQTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       248 ~ilrp~~v~g~~~~~~~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                      +++.||.+-.+....   +...+.   .+..--..+-..+|+++++..++.+
T Consensus       273 NaVaPG~i~T~~s~~---ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          273 RVSVLKAVVSQASSA---IPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             EEEECCCCCCHHHHT---STTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             EEEEeCCCcCchhhc---CCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence            999999987653211   000000   0000001123458888888887764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.49  E-value=3.3e-14  Score=142.73  Aligned_cols=199  Identities=19%  Similarity=0.182  Sum_probs=139.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHH-hcCCCC-eEEEEecCCch---hhh----c---CCCCcEEEccCCCcccHHHHhc--
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLK-ERSEQY-AARGLVRTEES---KQK----I---GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll-~~~~g~-~V~~l~R~~~~---~~~----l---~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      .++++|||||+|+||+.+++.|+ ++  |+ +|++++|+...   .++    +   ..++.++.+|++|.+++.++++  
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIER--GVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTS--SCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHc--CCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            46789999999999999999999 78  98 48999998432   221    2   2347889999999999999886  


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                          .+|+||||||.....  .+.....+++       ...+++|+.|+.++.+++.. .. +||++||..+.....   
T Consensus       607 ~~~~~id~lVnnAGv~~~~--~~~~~t~e~~-------~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~---  672 (795)
T 3slk_A          607 PDEHPLTAVVHAAGVLDDG--VSESLTVERL-------DQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSG---  672 (795)
T ss_dssp             CTTSCEEEEEECCCCCCCC--CGGGCCHHHH-------HHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCS---
T ss_pred             HHhCCCEEEEECCCcCCCC--chhhCCHHHH-------HHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCC---
Confidence                369999999975431  1112222223       33448999999999988733 34 899999987644332   


Q ss_pred             CCCcchHHHHHHHHHHHHH---hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          223 SLGNGNILVWKRKAEQYLA---DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                        +...|+.+|...+.+.+   ..|++++.|.||.+.+...... .-......+...+...+..+++...+..++..+.
T Consensus       673 --g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~-~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          673 --GQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMAST-LREAEQDRLARSGLLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHH-HHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhcc-ccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence              22579999988776544   5799999999999876542110 0000001111234556888999999988887654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.46  E-value=8.7e-14  Score=129.08  Aligned_cols=207  Identities=12%  Similarity=0.026  Sum_probs=123.2

Q ss_pred             CCCCeEEEECCCChhHHH--HHHHHHhcCCCCeEEEEecCCchh------------hh-------cCCCCcEEEccCCCc
Q 046297           80 MAKSTVLVTGAGGRTGQI--VYKKLKERSEQYAARGLVRTEESK------------QK-------IGGADDLFIGDIRDS  138 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~--l~~~Ll~~~~g~~V~~l~R~~~~~------------~~-------l~~~~~~v~~Dl~d~  138 (331)
                      ..++++|||||+++||.+  +++.|.++  |++|++++|+....            +.       ....+..+.+|++|+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~--Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGP--EAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSS--CCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhC--CCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCH
Confidence            357899999999999999  99999999  99999999965321            11       123477899999999


Q ss_pred             ccHHHHhc-------CCCEEEEcccCCCCCCC--------CCCCCCC--------------------CCCccccccCCCc
Q 046297          139 NSIIPAIQ-------GIDALIILTSAVPKMKP--------DFDPAKG--------------------GRPEFYFEEGAYP  183 (331)
Q Consensus       139 ~~~~~~l~-------~~d~Vi~~ag~~~~~~~--------~~~~~~~--------------------~~p~~~~~~~~~~  183 (331)
                      +++.++++       ++|++|||||......+        ...+...                    .-....|   ...
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~---~~~  212 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEI---EET  212 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHH---HHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHH---HHH
Confidence            98887764       58999999996411000        0000000                    0000000   001


Q ss_pred             ceehHHHHH-HHHHHHHHcCC----CeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------h-cCCCEEEE
Q 046297          184 EQVDWIGQK-NQIDAAKAAGA----KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------D-SGIPYTII  250 (331)
Q Consensus       184 ~~~nv~~~~-~ll~aa~~~~v----k~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~-~~~~~~il  250 (331)
                      .++|..+.. .+++++...+.    .++|.+||.++...   .+.+....|+.+|..++.+.+       . .|++++++
T Consensus       213 ~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~---~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V  289 (418)
T 4eue_A          213 RKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT---YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVS  289 (418)
T ss_dssp             HHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred             HHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC---CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEE
Confidence            122222222 34444443322    47999999876432   223333569999999886654       5 68999999


Q ss_pred             ecCcccCCCcchhhhhccCCcc---ccCCcccccCHHHHHHHHHHHhcCc
Q 046297          251 RAGGLQDKEGGIRELLVGKDDE---LLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       251 rp~~v~g~~~~~~~~~~~~~~~---~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                      .||.+-.+....   +...+..   +..-....-..+|+++++..++.+.
T Consensus       290 ~PG~v~T~~s~~---ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~  336 (418)
T 4eue_A          290 VNKALVTKASAY---IPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEK  336 (418)
T ss_dssp             ECCCCCCHHHHT---STTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             ECCcCcChhhhc---CCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhcc
Confidence            999997653210   0000000   0000011234688888888887654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.37  E-value=1.5e-12  Score=99.38  Aligned_cols=93  Identities=26%  Similarity=0.242  Sum_probs=79.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      +++|+|+|+ |++|+.+++.|++.  | ++|++++|++++.+.+. .++.++.+|+.+.+.+.++++++|+|||+++.  
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~--   79 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF--   79 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG--
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc--
Confidence            578999999 99999999999999  8 99999999988766653 45788999999999999999999999999963  


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEE
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVL  208 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~  208 (331)
                                               .    ....+++++.+.|+++|.+
T Consensus        80 -------------------------~----~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           80 -------------------------F----LTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             -------------------------G----GHHHHHHHHHHTTCEEECC
T ss_pred             -------------------------h----hhHHHHHHHHHhCCCEEEe
Confidence                                     1    1468899999999876654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.26  E-value=8.1e-11  Score=130.35  Aligned_cols=198  Identities=15%  Similarity=0.090  Sum_probs=127.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchhh-------hc---CCCCcEEEccCCCcccHHHHhc---
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESKQ-------KI---GGADDLFIGDIRDSNSIIPAIQ---  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~~-------~l---~~~~~~v~~Dl~d~~~~~~~l~---  146 (331)
                      .++++|||||+|+||+.+++.|+++  |++ |++++|+..+.+       ++   ..++.++.+|++|.+++.++++   
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLR--GAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHC--CCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999  997 778888854321       12   2246788999999998887764   


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~  221 (331)
                         .+|+||||||.....  .+.....++++.       .+++|+.|+.++.+++...  ...+||++||..+.....  
T Consensus      1961 ~~g~id~lVnnAgv~~~~--~~~~~t~e~~~~-------~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~-- 2029 (2512)
T 2vz8_A         1961 QLGPVGGVFNLAMVLRDA--VLENQTPEFFQD-------VSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA-- 2029 (2512)
T ss_dssp             HHSCEEEEEECCCC-------------------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT--
T ss_pred             hcCCCcEEEECCCcCCCC--chhhCCHHHHHH-------HHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC--
Confidence               589999999975321  222333344444       4499999999998877654  346999999987643322  


Q ss_pred             CCCCcchHHHHHHHHHHHHH---hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCc
Q 046297          222 NSLGNGNILVWKRKAEQYLA---DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFE  297 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  297 (331)
                         +...|+.+|...+.+.+   ..|++...+..|.+-+-+.-....  + ...+...+...+...++-..+-.++..+
T Consensus      2030 ---g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~~G~~~~~~--~-~~~~~~~g~~~~~~~~~l~~l~~~~~~~ 2102 (2512)
T 2vz8_A         2030 ---GQANYGFANSAMERICEKRRHDGLPGLAVQWGAIGDVGVVLETM--G-TNDTVIGGTLPQRIASCLEVLDLFLSQP 2102 (2512)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCTTSTTTC-------CCCCTTSEECBCHHHHHHHHHHHHTCS
T ss_pred             ---CcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCCcchhhhcc--h-hHHHHhhcccCccHHHHHHHHHHHhhCC
Confidence               22579999999997765   578998888888654332111110  0 1111112333456666666665555544

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.16  E-value=2e-10  Score=127.31  Aligned_cols=226  Identities=12%  Similarity=0.038  Sum_probs=134.1

Q ss_pred             CCCCeEEEECCCCh-hHHHHHHHHHhcCCCCeEEEEecCCch-----hhhc----C---CCCcEEEccCCCcccHHHHhc
Q 046297           80 MAKSTVLVTGAGGR-TGQIVYKKLKERSEQYAARGLVRTEES-----KQKI----G---GADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~-iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~l----~---~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      ..+|++|||||+++ ||+++++.|+++  |++|++++|+.+.     .+++    .   ..+..+.+|++|++++.++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~--GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDG--GATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHT--TCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHC--CCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            46789999999999 999999999999  9999999998765     3322    1   236788999999998887742


Q ss_pred             -----------CCCEEEEcccCC----CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCC---
Q 046297          147 -----------GIDALIILTSAV----PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAK---  204 (331)
Q Consensus       147 -----------~~d~Vi~~ag~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk---  204 (331)
                                 ++|++|||||..    .... ........+++..+   +..+++|+.++..+++++.    +.+..   
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~-~~~~~~~e~~~~~~---e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~ 2287 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAA-PRVAGDMSEVGSRA---EMEMKVLLWAVQRLISGLSKIGAERDIASRL 2287 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCCCSEEEECCC-CCCCCTTSCTTSHH---HHHHHHHTHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred             HHHhhhhhhcCCCCEEEECCCcccccCcccc-cccCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence                       489999999972    1111 01111223333221   1113667777766666553    33321   


Q ss_pred             eEEEE-ccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH----h----cCCCEEEEecCcccCCCcc-hhhhhccCCcccc
Q 046297          205 QIVLV-GSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA----D----SGIPYTIIRAGGLQDKEGG-IRELLVGKDDELL  274 (331)
Q Consensus       205 ~~v~~-SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~----~----~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~~~~  274 (331)
                      .+|.. |+..+...       ....|..+|..++.+.+    +    .+++++.+.||++-+.... ......   ....
T Consensus      2288 ~ii~~~ss~~g~~g-------~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~---~~~~ 2357 (3089)
T 3zen_D         2288 HVVLPGSPNRGMFG-------GDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIV---SAVE 2357 (3089)
T ss_dssp             EEEEEECSSTTSCS-------SCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTH---HHHG
T ss_pred             EEEEECCcccccCC-------CchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHH---HHHH
Confidence            22322 22221111       11359999999887655    3    2477889999998743211 000000   0000


Q ss_pred             CCcccccCHHHHHHHHHHHhcCcc---cCCce--EEeccCCCCC---CCCHHHHHHHH
Q 046297          275 QTETRTIARADVAEVCIQALQFEE---AKFKA--FDLASKPEGT---GTPTKDFKALF  324 (331)
Q Consensus       275 ~~~~~~i~v~Dva~~~~~~l~~~~---~~~~~--~~i~~~~~~~---~~t~~e~~~~~  324 (331)
                      .........+|+|.+++.++....   ..++.  ..+.+   |-   .+++.++.+.+
T Consensus      2358 ~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~G---G~~~~~~~~~~~~~~~ 2412 (3089)
T 3zen_D         2358 EAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTG---GLGDIKIDMAELAAKA 2412 (3089)
T ss_dssp             GGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSB---SCSSCCCCHHHHTHHH
T ss_pred             hcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCC---CcCcCCCCHHHHHHHH
Confidence            011123488999999999876542   12232  33445   33   35677776654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.07  E-value=1.1e-09  Score=86.32  Aligned_cols=98  Identities=17%  Similarity=0.200  Sum_probs=77.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH-hcCCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA-IQGIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag~~~  159 (331)
                      +++|+|+|+ |.+|+.+++.|.+.  |++|++++|++++.+.+.. ...++.+|..+.+.+.++ ++++|+||++++.  
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~--   80 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA--   80 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCS--
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC--
Confidence            567999998 99999999999999  9999999998877665543 356788999998878776 7789999999873  


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                                                 +......++..+++.+++++|..++
T Consensus        81 ---------------------------~~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           81 ---------------------------NIQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             ---------------------------CHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             ---------------------------chHHHHHHHHHHHHcCCCeEEEEeC
Confidence                                       1122345677788888887776554

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.01  E-value=1.3e-09  Score=98.33  Aligned_cols=114  Identities=16%  Similarity=0.088  Sum_probs=81.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhh--hcCCC-Cc-EEEccCCCcccHHHHhcCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQ--KIGGA-DD-LFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~--~l~~~-~~-~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      .++||+|+||+|++|..++..|+++  |  ++|++++++++...  .+... .. -+.+ +.+.+++.++++++|+|||+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~   83 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMN--PLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVP   83 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEc
Confidence            3578999999999999999999998  7  89999998765211  12221 11 1222 22355688899999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      +|.....+        ....       +....|+.+++++++++++.+.+.+|+++|-
T Consensus        84 ag~~~~~g--------~~r~-------dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           84 AGVPRKPG--------MTRD-------DLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             CCCCCCSS--------CCCS-------HHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCcCCCCC--------CCHH-------HHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            99633211        1111       1237899999999999999998888888764

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.99  E-value=4.8e-10  Score=101.33  Aligned_cols=112  Identities=15%  Similarity=0.117  Sum_probs=82.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-------eEEEEecC----Cchhhh----cCCC-CcEEEccCCCcccHHHHh
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-------AARGLVRT----EESKQK----IGGA-DDLFIGDIRDSNSIIPAI  145 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-------~V~~l~R~----~~~~~~----l~~~-~~~v~~Dl~d~~~~~~~l  145 (331)
                      .+||+||||+|++|++++..|+.+  |+       +|++++++    +++.+.    +... ..+ ..|+...+++.+++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHh
Confidence            478999999999999999999998  75       89999888    433321    3222 223 35777777889999


Q ss_pred             cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CC-eEEEEcc
Q 046297          146 QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AK-QIVLVGS  211 (331)
Q Consensus       146 ~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk-~~v~~SS  211 (331)
                      +++|+|||+||.....+        .+....       ...|+.+++++++++++++ .+ +||++|.
T Consensus        82 ~~aD~Vi~~ag~~~~~g--------~~r~dl-------~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           82 KDADVALLVGARPRGPG--------MERKDL-------LEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             TTCSEEEECCCCCCCTT--------CCHHHH-------HHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCCEEEEeCCCCCCCC--------CCHHHH-------HHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            99999999999633211        111222       2679999999999999984 66 8888875

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.98  E-value=2.4e-09  Score=84.31  Aligned_cols=72  Identities=18%  Similarity=0.247  Sum_probs=62.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      +++|+|+|+ |.+|+++++.|.++  |++|+++++++++.+.+. ....++.+|.+|++.+.++ ++++|+||.+.+
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            568999998 99999999999999  999999999988766653 3578899999999988876 468999998876

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.94  E-value=1.2e-09  Score=96.88  Aligned_cols=76  Identities=13%  Similarity=0.054  Sum_probs=65.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC------CCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG------GADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~------~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      ..+++++||||+|++|+++++.|++.  |++|++++|+.++.+++.      .++.++.+|++|++++.++++++|+|||
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~--G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn  194 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT  194 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEE
Confidence            45689999999999999999999999  999999999876654432      2467888999999999999999999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus       195 ~ag~  198 (287)
T 1lu9_A          195 AGAI  198 (287)
T ss_dssp             CCCT
T ss_pred             CCCc
Confidence            9985

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.94  E-value=6.4e-09  Score=81.38  Aligned_cols=96  Identities=19%  Similarity=0.149  Sum_probs=73.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHH-hcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPA-IQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag~~  158 (331)
                      .|+|+|+|+ |++|+.+++.|.+.  |++|++++|++++.+.+..  ++.++.+|..+++.+.+. ++++|+||++.+. 
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~-   79 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK-   79 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC-
Confidence            468999987 99999999999999  9999999998877665532  466788999888877655 6789999999752 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                                                   -.....+...+++.+.+++|...
T Consensus        80 -----------------------------~~~~~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           80 -----------------------------EEVNLMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             -----------------------------HHHHHHHHHHHHHTTCCCEEEEC
T ss_pred             -----------------------------chHHHHHHHHHHHcCCCEEEEEe
Confidence                                         11123566677777877877533

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.86  E-value=1.5e-09  Score=97.37  Aligned_cols=114  Identities=15%  Similarity=0.009  Sum_probs=76.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec--CCchhhh----cCC--CCcEEEccCCCc-ccHHHHhcCCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR--TEESKQK----IGG--ADDLFIGDIRDS-NSIIPAIQGIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R--~~~~~~~----l~~--~~~~v~~Dl~d~-~~~~~~l~~~d~Vi~  153 (331)
                      |||+||||+|++|++++..|+.++...+++++++  ++++.+.    +..  ...-...++.+. +++.++++++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            5799999999999999999998821236777877  5432221    111  010011233322 236678999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      +||.....+        .....       ....|+.+++++++++++++ +.+|+++|-
T Consensus        81 ~Ag~~~~~g--------~~r~d-------l~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           81 TSGVPRKEG--------MSRMD-------LAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             CCSCCCCTT--------CCHHH-------HHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             CCCCCCCCC--------CcHHH-------HHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            999633211        11111       23789999999999999999 888888875

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.85  E-value=1.1e-08  Score=93.69  Aligned_cols=72  Identities=17%  Similarity=0.223  Sum_probs=65.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .|||+|.|| |++|+.+++.|.+   .++|.+.+|+.++++.+.+....+..|+.|.+.+.++++++|+||+++++
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~   87 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD---EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPG   87 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT---TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence            578999998 9999999998864   58999999999888888888889999999999999999999999999874

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.84  E-value=3.3e-08  Score=78.94  Aligned_cols=73  Identities=21%  Similarity=0.291  Sum_probs=61.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh----cCCCCcEEEccCCCcccHHHH-hcCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK----IGGADDLFIGDIRDSNSIIPA-IQGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~----l~~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~  154 (331)
                      ..++|+|+|+ |.+|+++++.|.+.  |++|++++|++ ++.+.    ...++.++.+|.+|++.+.++ ++++|+||.+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence            3568999996 99999999999999  99999999985 32222    244689999999999999887 8899999998


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      .+
T Consensus        79 ~~   80 (153)
T 1id1_A           79 SD   80 (153)
T ss_dssp             SS
T ss_pred             cC
Confidence            76

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.81  E-value=7.8e-08  Score=76.95  Aligned_cols=73  Identities=12%  Similarity=0.228  Sum_probs=62.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      ..++|+|+|+ |.+|..+++.|.+.  |++|++++|++++.+.+.  .+..++.+|..+++.+.++ ++++|+||.+.+
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSS--GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            3578999996 99999999999999  999999999988877765  2467788999888777765 678999999986

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.78  E-value=8.1e-09  Score=92.11  Aligned_cols=106  Identities=13%  Similarity=0.030  Sum_probs=74.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEec--CCchhhh----c------CCCCcEEEccCCCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVR--TEESKQK----I------GGADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R--~~~~~~~----l------~~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      |||+|+||+|++|+.++..|+.+  ++  +++++++  ++++.+.    +      ...+.+.. |  +    .++++++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~a   71 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGS   71 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCC
Confidence            58999999999999999999988  54  6888888  5543321    1      11122222 1  1    4568999


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      |+|||++|.....+        ....       +....|+.+++++++++++++.+.+|+++|-
T Consensus        72 DvVi~~ag~~~~~g--------~~r~-------dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           72 DVVVITAGIPRQPG--------QTRI-------DLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             SEEEECCCCCCCTT--------CCHH-------HHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             CEEEEcCCCCCCCC--------CCHH-------HHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            99999999633211        0111       1237799999999999999988888888765

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.72  E-value=2.4e-08  Score=92.75  Aligned_cols=73  Identities=22%  Similarity=0.244  Sum_probs=62.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC---CeEEEEecCCchhhhcC--------CCCcEEEccCCCcccHHHHhcC--C
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ---YAARGLVRTEESKQKIG--------GADDLFIGDIRDSNSIIPAIQG--I  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g---~~V~~l~R~~~~~~~l~--------~~~~~v~~Dl~d~~~~~~~l~~--~  148 (331)
                      |++|+|+|| |++|+.+++.|++.  |   .+|++.+|+.++.+.+.        ..+..+.+|+.|.+++.+++++  +
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~--g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~   77 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMN--REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKP   77 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTC--TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCC
Confidence            368999999 99999999999998  6   48999999987765432        2478899999999999999987  9


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |+|||+++.
T Consensus        78 DvVin~ag~   86 (405)
T 4ina_A           78 QIVLNIALP   86 (405)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCc
Confidence            999999984

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.71  E-value=2.8e-08  Score=93.37  Aligned_cols=112  Identities=19%  Similarity=0.107  Sum_probs=79.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC---CcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA---DDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~---~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .+++|+|+| +|++|+++++.|++.  |++|++++|++++.+.+...   +..+.+|+.|.+++.++++++|+|||+++.
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~   78 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY   78 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC-
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcc
Confidence            467899998 799999999999998  99999999998777665432   557889999999999999999999999985


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcce--ehHHHHHHHHHHHHHcCCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQ--VDWIGQKNQIDAAKAAGAK  204 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~nv~~~~~ll~aa~~~~vk  204 (331)
                      .....       .  ....+........  .......+++++|+++|++
T Consensus        79 ~~~~~-------i--~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           79 TFHAT-------V--IKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             -CHHH-------H--HHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             ccchH-------H--HHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            21100       0  0000000000001  1134578899999999874

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.69  E-value=7.5e-08  Score=81.41  Aligned_cols=187  Identities=10%  Similarity=0.063  Sum_probs=102.7

Q ss_pred             CCCCeEEEECC----------------CChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHH
Q 046297           80 MAKSTVLVTGA----------------GGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP  143 (331)
Q Consensus        80 ~~~~~VlVtGa----------------tG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~  143 (331)
                      +.+++||||||                +|.+|.++++.|+++  |++|+++.|+.. .. ...  ..-..|+.+.+++.+
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~--Ga~V~l~~~~~~-l~-~~~--g~~~~dv~~~~~~~~   79 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVS-LP-TPP--FVKRVDVMTALEMEA   79 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCC-CC-CCT--TEEEEECCSHHHHHH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHC--CCEEEEEECCcc-cc-cCC--CCeEEccCcHHHHHH
Confidence            45789999999                799999999999999  999999988652 11 111  234568887665554


Q ss_pred             Hh----cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCCCC
Q 046297          144 AI----QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       144 ~l----~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~~~  218 (331)
                      .+    .++|++|||||..........+.++..-+    .......+.+.-+..++..+.+. ..++| .++-..-   .
T Consensus        80 ~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~----~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-~VGFaaE---t  151 (226)
T 1u7z_A           80 AVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQA----TQGDELTIKMVKNPDIVAGVAALKDHRPY-VVGFAAE---T  151 (226)
T ss_dssp             HHHHHGGGCSEEEECCBCCSEEESSCCSSCC-----------CEEEEEEEECCCHHHHHHHCSSSCCE-EEEEEEE---S
T ss_pred             HHHHhcCCCCEEEECCcccCCCCccCChHHhcccc----ccCCceEEEEeecHHHHHHHHhhhcCCcE-EEEcchh---h
Confidence            43    47999999999753221111111111100    00001122333345566666654 23344 3343221   1


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHhcCCCEEEEecCc----ccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGG----LQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~----v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                      ..          . ...+.+-++++++++++..+-.    -+|...+...++.....    ...+..+-++||+.++..+
T Consensus       152 ~~----------l-~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~----~~~~~~sK~~vA~~I~~~i  216 (226)
T 1u7z_A          152 NN----------V-EEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGD----KVLPLERKELLGQLLLDEI  216 (226)
T ss_dssp             SS----------H-HHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEE----EEEEEEEHHHHHHHHHHHH
T ss_pred             ch----------H-HHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCc----EecCCCCHHHHHHHHHHHH
Confidence            10          1 2223444567899999988754    23333322222222110    1133456788888888766


Q ss_pred             c
Q 046297          295 Q  295 (331)
Q Consensus       295 ~  295 (331)
                      .
T Consensus       217 ~  217 (226)
T 1u7z_A          217 V  217 (226)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.63  E-value=1.3e-07  Score=80.14  Aligned_cols=71  Identities=18%  Similarity=0.270  Sum_probs=62.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      |+|+|+|+ |.+|+++++.|.++  |++|+++++++++.+.+.  .+..++.+|.++++.+.++ ++++|+||.+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSR--KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            57999996 99999999999999  999999999998776653  3578999999999988887 789999998875

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.52  E-value=2.6e-07  Score=79.11  Aligned_cols=71  Identities=14%  Similarity=0.182  Sum_probs=61.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      .++|+|+|+ |.+|+.+++.|.+.  |+ |++++|+++..+.+..++.++.+|.+|++.+.++ ++++|.||.+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGS--EV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            467999997 99999999999999  99 9999999887665545688999999999988877 789999998875

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.49  E-value=2.2e-07  Score=78.72  Aligned_cols=74  Identities=19%  Similarity=0.234  Sum_probs=53.8

Q ss_pred             CCeEEEECC----------------CChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHH--
Q 046297           82 KSTVLVTGA----------------GGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIP--  143 (331)
Q Consensus        82 ~~~VlVtGa----------------tG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~--  143 (331)
                      +++||||||                +|++|.++++.|+++  |++|+++.|........+..+  -..|+...+++.+  
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~--Ga~V~lv~~~~~~~~~~~~~~--~~~~v~s~~em~~~v   78 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSA--GYEVCLITTKRALKPEPHPNL--SIREITNTKDLLIEM   78 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHT--TCEEEEEECTTSCCCCCCTTE--EEEECCSHHHHHHHH
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHC--CCEEEEEeCCccccccCCCCe--EEEEHhHHHHHHHHH
Confidence            688999999                999999999999999  999999999753211112223  3345555544433  


Q ss_pred             --HhcCCCEEEEcccCCC
Q 046297          144 --AIQGIDALIILTSAVP  159 (331)
Q Consensus       144 --~l~~~d~Vi~~ag~~~  159 (331)
                        .+.++|++||+||...
T Consensus        79 ~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           79 QERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHGGGCSEEEECSBCCS
T ss_pred             HHhcCCCCEEEEcCcccc
Confidence              3457999999999643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.47  E-value=9.6e-07  Score=69.25  Aligned_cols=72  Identities=15%  Similarity=0.219  Sum_probs=62.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      .++|+|+|+ |.+|+.+++.|.+.  |++|+++++++++.+.+. .++.++.+|.++++.+.++ ++++|+||.+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            467999997 99999999999999  999999999998876653 4578899999999988765 578999998876

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.47  E-value=1.8e-07  Score=88.22  Aligned_cols=75  Identities=20%  Similarity=0.228  Sum_probs=63.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--CCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--GADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .+++|+|+|+ |++|+.+++.|++.+ +++|++++|++++.+.+.  .++..+.+|+.|.+++.++++++|+|||+++.
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~-g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAAND-DINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTST-TEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            3568999997 999999999999873 689999999987766543  24667889999998899999999999999985

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.47  E-value=8.4e-07  Score=72.83  Aligned_cols=75  Identities=21%  Similarity=0.322  Sum_probs=62.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHH--hcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPA--IQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~--l~~~d~Vi~~ag  156 (331)
                      ..+++|+|+|+ |.+|..+++.|.+.. |++|++++|++++.+.+. .++.++.+|..+++.+.++  ++++|+||.+.+
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            34568999985 999999999998852 689999999988766553 3577889999998888877  789999998875

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.43  E-value=2.5e-07  Score=83.32  Aligned_cols=112  Identities=21%  Similarity=0.126  Sum_probs=76.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC--e-----EEEEecCCc--hhh----hcCC-CCcEEEccCCCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY--A-----ARGLVRTEE--SKQ----KIGG-ADDLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~-----V~~l~R~~~--~~~----~l~~-~~~~v~~Dl~d~~~~~~~l~~  147 (331)
                      .+||+||||+|+||++++..|+..  +.  +     ++++++++.  +.+    .+.+ ...+. .++...+...+.+++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~--~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKD   79 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhC--CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCC
Confidence            468999999999999999999987  54  4     888888642  221    1211 11222 234334556778999


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC--eEEEEcc
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK--QIVLVGS  211 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk--~~v~~SS  211 (331)
                      +|+||+.||.....+        .       ...+..+.|+..++.+++++++++.+  +++.+|-
T Consensus        80 aDvVvitAg~prkpG--------~-------tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           80 LDVAILVGSMPRRDG--------M-------ERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             CSEEEECCSCCCCTT--------C-------CTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEeCCCCCCCC--------C-------CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            999999998643211        1       11223377999999999999999875  4666554

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.39  E-value=7.2e-07  Score=79.79  Aligned_cols=109  Identities=14%  Similarity=0.098  Sum_probs=74.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhh--hcCCCCcEEEccCCC---cccHHHHhcCCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQ--KIGGADDLFIGDIRD---SNSIIPAIQGIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~--~l~~~~~~v~~Dl~d---~~~~~~~l~~~d~Vi~~a  155 (331)
                      |||.|+||+|++|..++..|+..  +  ++|+++++++.+..  .+.+...  ..++..   .+++.++++++|+||+++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a~~~aDvVvi~a   76 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIET--RATVKGYLGPEQLPDCLKGCDVVVIPA   76 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSSS--SCEEEEEESGGGHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCccHHHHHHHhccCc--CceEEEecCCCCHHHHhCCCCEEEECC
Confidence            58999999999999999999988  6  78999999872211  2222211  122322   246788899999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      |.....+.        ..       .+....|+...+.+++.+++...+ +||++|
T Consensus        77 g~~~~~g~--------~r-------~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           77 GVPRKPGM--------TR-------DDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             SCCCCTTC--------CG-------GGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CcCCCCCC--------cH-------HHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            86432211        00       112367888899999999887654 666644

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.30  E-value=1.7e-06  Score=78.46  Aligned_cols=174  Identities=15%  Similarity=0.071  Sum_probs=104.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHH-hcCCCCeEEEEecCCchhh-------------------hcCCCCcEEEccCCCcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLK-ERSEQYAARGLVRTEESKQ-------------------KIGGADDLFIGDIRDSN  139 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll-~~~~g~~V~~l~R~~~~~~-------------------~l~~~~~~v~~Dl~d~~  139 (331)
                      ...|++|||||+.++|.+.+..|. +.  |..|+++.|..+..+                   +.......+.+|++|++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~--GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGY--GAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHH--CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhC--CCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            347899999999999999999998 57  899999988654321                   12234788999999999


Q ss_pred             cHHHHhc-------CCCEEEEcccCCCCCCCCCCC--CCCCCCc------cccccCCC---------cceehHHHHHH--
Q 046297          140 SIIPAIQ-------GIDALIILTSAVPKMKPDFDP--AKGGRPE------FYFEEGAY---------PEQVDWIGQKN--  193 (331)
Q Consensus       140 ~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~--~~~~~p~------~~~~~~~~---------~~~~nv~~~~~--  193 (331)
                      .+.++++       ++|+|||+++......+.-..  .+...|.      .+++....         ..+-++.++..  
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM  205 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM  205 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence            8888875       689999999975432210000  0000000      00000000         00112334332  


Q ss_pred             -------HHHHHHHcCC----CeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHh-----cCCCEEEEecCcccC
Q 046297          194 -------QIDAAKAAGA----KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLAD-----SGIPYTIIRAGGLQD  257 (331)
Q Consensus       194 -------ll~aa~~~~v----k~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-----~~~~~~ilrp~~v~g  257 (331)
                             ..++....++    .++|.+|+.+. ....|  .|....++.+|..+|...+.     .++++.++.++.+..
T Consensus       206 g~s~~s~w~~al~~a~lla~G~siva~SYiGs-e~t~P--~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~a~vT  282 (401)
T 4ggo_A          206 GGEDWERWIKQLSKEGLLEEGCITLAYSYIGP-EATQA--LYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNKGLVT  282 (401)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCC-GGGHH--HHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCCCCC
T ss_pred             hhhHHHHHHHHHHhhhcccCCceEEEEeccCc-ceeec--CCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCcccc
Confidence                   2333344332    36788887764 22222  22223578999999976652     356677777776655


Q ss_pred             C
Q 046297          258 K  258 (331)
Q Consensus       258 ~  258 (331)
                      .
T Consensus       283 ~  283 (401)
T 4ggo_A          283 R  283 (401)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.29  E-value=8.8e-07  Score=73.62  Aligned_cols=72  Identities=15%  Similarity=0.189  Sum_probs=54.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH---hc--CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA---IQ--GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~---l~--~~d~Vi~~a  155 (331)
                      +++|+|+||+|.||..+++.+...  |++|++++|++++.+.+.. .... ..|..+.+....+   ..  ++|+||+++
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  115 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSL  115 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence            578999999999999999999999  9999999998776554332 2332 3477765543333   22  599999998


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       116 g  116 (198)
T 1pqw_A          116 A  116 (198)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.20  E-value=5.4e-06  Score=76.91  Aligned_cols=72  Identities=21%  Similarity=0.212  Sum_probs=63.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      .++|+|+|+ |.+|+.+++.|.+.  |+.|++++++++..+.+. .++.++.+|.++++.+.++ ++++|+||.+.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            467999996 99999999999999  999999999998877653 3588999999999998887 789999998875

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.05  E-value=4.9e-06  Score=74.93  Aligned_cols=73  Identities=23%  Similarity=0.243  Sum_probs=55.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-----CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-----GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~  154 (331)
                      .+++|||+||+|.||..+++.+...  |++|++++|++++.+.+.. ... ...|..+.+++.+.+.     ++|+||++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~  221 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDN  221 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence            3578999999999999999999999  9999999998776554422 122 3357777444544442     68999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      +|
T Consensus       222 ~g  223 (333)
T 1v3u_A          222 VG  223 (333)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.03  E-value=3.3e-06  Score=76.19  Aligned_cols=115  Identities=9%  Similarity=-0.066  Sum_probs=73.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      +.++||.|+|++|++|+.++..|+..+...+|+++++++++.+.    +.... +...++.-..+..++++++|+||.++
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~~~i~~t~d~~~al~dADvVvita   84 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEGLNLTFTSDIKEALTDAKYIVSSG   84 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTTCCCEEESCHHHHHTTEEEEEECC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCCCceEEcCCHHHHhCCCCEEEEcc
Confidence            44689999999999999999999998222589999998765432    21110 10012222345778899999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCe--EEEEc
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQ--IVLVG  210 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~--~v~~S  210 (331)
                      |.....+.       .  .      .+....|....+.+++.+++++.+-  ++.+|
T Consensus        85 G~p~kpG~-------~--R------~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           85 GAPRKEGM-------T--R------EDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             C--------------C--H------HHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             CCCCCCCC-------C--H------HHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            86332110       0  0      1112568888899999998886554  34444

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.03  E-value=1.3e-06  Score=73.45  Aligned_cols=71  Identities=15%  Similarity=0.070  Sum_probs=53.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCc-EEE-ccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD-LFI-GDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~-~v~-~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |+|+|+||+|.+|+.+++.|++.  |++|++++|++++.+.+..... .+. .|+. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            47999999999999999999999  9999999998776554322110 000 2332 3457778889999999985

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.01  E-value=9.3e-06  Score=76.44  Aligned_cols=72  Identities=15%  Similarity=0.245  Sum_probs=63.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      .|+|+|.|+ |.+|++|++.|.+.  ||.|++++++++..+.+..  .+..+.||.++++.+.++ ++++|.++-+.+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~   77 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGE--NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN   77 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence            578999997 99999999999999  9999999999988777643  478899999999999887 578999987654

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.01  E-value=5e-06  Score=76.10  Aligned_cols=74  Identities=19%  Similarity=0.122  Sum_probs=60.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...++|+|+|+ |.||..+++.|...  |++|++++|++++.+.+..  ... +.+|..+.+++.++++++|+||++++.
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            34689999999 99999999999999  9999999999876554321  122 566777888898999999999999985

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.01  E-value=9.1e-06  Score=73.67  Aligned_cols=74  Identities=20%  Similarity=0.312  Sum_probs=56.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-----CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-----GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~  154 (331)
                      .+++|||+||+|.||..+++.+...  |++|++++|++++.+.+.. ... ...|+.+.+++.+.+.     ++|+||++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  245 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRSIGGE-VFIDFTKEKDIVGAVLKATDGGAHGVINV  245 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHHTTCC-EEEETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHHcCCc-eEEecCccHhHHHHHHHHhCCCCCEEEEC
Confidence            3578999999999999999999999  9999999998876544322 222 2348776555555443     69999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      +|.
T Consensus       246 ~g~  248 (347)
T 2hcy_A          246 SVS  248 (347)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            983

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.98  E-value=1.4e-05  Score=72.05  Aligned_cols=70  Identities=14%  Similarity=0.178  Sum_probs=61.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      .++|+|.|+ |.+|+.+++.|.++  |+ |+++++++++.+ +. .++.++.+|.+|++.+.++ ++++|.|+.+.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~--g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGS--EV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGS--CE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhC--Cc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence            457999996 99999999999999  99 999999998876 53 4688999999999999887 789999998875

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.97  E-value=7.2e-06  Score=71.68  Aligned_cols=75  Identities=20%  Similarity=0.182  Sum_probs=45.4

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhh--hcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQ--KIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~--~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .+++|+|+|++|.+|+.+++.+.+.+ +++++++ +|++++..  .+.....+...++...+++.++++++|+||+++.
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~-~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~   81 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR   81 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC
Confidence            45789999999999999999988653 8998854 55443211  1110000011122222334455668899998875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.91  E-value=8e-06  Score=73.36  Aligned_cols=73  Identities=15%  Similarity=0.066  Sum_probs=54.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh---c--CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI---Q--GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l---~--~~d~Vi~~  154 (331)
                      ..++|||+||+|.||..+++.+...  |++|++++|++++.+.+.. ... ...|..+.+...++.   .  ++|+||++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~D~vi~~  216 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALKAGAW-QVINYREEDLVERLKEITGGKKVRVVYDS  216 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCC-EEEECCCccHHHHHHHHhCCCCceEEEEC
Confidence            3578999999999999999999999  9999999998766554322 122 234766655444333   2  58999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      +|
T Consensus       217 ~g  218 (327)
T 1qor_A          217 VG  218 (327)
T ss_dssp             SC
T ss_pred             Cc
Confidence            98

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.90  E-value=1.9e-05  Score=71.45  Aligned_cols=97  Identities=14%  Similarity=0.085  Sum_probs=61.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCC------CeEEEEecCCc--h-hhhcCCCCcE-EEccCCCcccHHHHhcCCCE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQ------YAARGLVRTEE--S-KQKIGGADDL-FIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g------~~V~~l~R~~~--~-~~~l~~~~~~-v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      .+++|+|.||||++|+.+++.|+++  +      .+++.+.+...  + .....+.+.- ...++.+.+  .+.+.++|+
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~--~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~--~~~~~~~Dv   83 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGH--PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE--AAVLGGHDA   83 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTC--HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC--HHHHTTCSE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcC--CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC--HHHhcCCCE
Confidence            3578999999999999999999988  5      47888765332  1 2222111110 011111111  233569999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~  214 (331)
                      ||.++|...                               ...+++.+ +.|+ ++|-+|+..-
T Consensus        84 Vf~alg~~~-------------------------------s~~~~~~~-~~G~-~vIDlSa~~R  114 (352)
T 2nqt_A           84 VFLALPHGH-------------------------------SAVLAQQL-SPET-LIIDCGADFR  114 (352)
T ss_dssp             EEECCTTSC-------------------------------CHHHHHHS-CTTS-EEEECSSTTT
T ss_pred             EEECCCCcc-------------------------------hHHHHHHH-hCCC-EEEEECCCcc
Confidence            999987421                               35677777 7785 6777888764

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.86  E-value=1.5e-05  Score=72.17  Aligned_cols=73  Identities=22%  Similarity=0.222  Sum_probs=54.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-C-CCcEEEccCCCcccHHHHh-----cCCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-G-ADDLFIGDIRDSNSIIPAI-----QGIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~-~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~  153 (331)
                      .+++|||+||+|.+|..+++.+...  |++|++++|++++.+.+. . +... ..|..+.+++.+.+     .++|+||+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            3578999999999999999999999  999999999987765543 2 2332 24776543333333     26999999


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      ++|
T Consensus       232 ~~g  234 (345)
T 2j3h_A          232 NVG  234 (345)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            997

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.86  E-value=1.6e-05  Score=72.27  Aligned_cols=73  Identities=26%  Similarity=0.299  Sum_probs=54.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH---hc--CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA---IQ--GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~---l~--~~d~Vi~~  154 (331)
                      .+++|||+||+|.+|..+++.+...  |++|++++|++++.+.+.. +.. ...|..+.+...++   ..  ++|+||++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  246 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAH-EVFNHREVNYIDKIKKYVGEKGIDIIIEM  246 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCS-EEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHcCCC-EEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence            3578999999999999999999999  9999999998876554322 222 23466665433332   22  69999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      +|
T Consensus       247 ~G  248 (351)
T 1yb5_A          247 LA  248 (351)
T ss_dssp             CH
T ss_pred             CC
Confidence            98

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.85  E-value=1.1e-05  Score=72.64  Aligned_cols=74  Identities=18%  Similarity=0.157  Sum_probs=54.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH---h--cCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA---I--QGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~---l--~~~d~Vi~~  154 (331)
                      .+++|||+||+|.||..+++.+...  |++|++++|++++.+.+.. ... ...|..+.+...++   .  .++|+||++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARKLGCH-HTINYSTQDFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCC-EEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence            3578999999999999999999999  9999999999866554322 122 23466665433332   2  269999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      +|.
T Consensus       222 ~g~  224 (333)
T 1wly_A          222 IGK  224 (333)
T ss_dssp             SCT
T ss_pred             CcH
Confidence            984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.83  E-value=1.6e-05  Score=71.82  Aligned_cols=73  Identities=15%  Similarity=0.098  Sum_probs=54.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCccc---HHHHhc--CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNS---IIPAIQ--GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~---~~~~l~--~~d~Vi~~  154 (331)
                      ..++|||+||+|.+|..+++.+...  |++|++++|++++.+.+.. .... ..|..+.+.   +.++..  ++|+||++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~  242 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKALGADE-TVNYTHPDWPKEVRRLTGGKGADKVVDH  242 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSE-EEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCE-EEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence            3578999999999999999999999  9999999998876654322 2232 247665542   333332  68999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      +|
T Consensus       243 ~g  244 (343)
T 2eih_A          243 TG  244 (343)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.82  E-value=2.4e-05  Score=70.54  Aligned_cols=73  Identities=18%  Similarity=0.201  Sum_probs=55.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CC-CCcEEEccCCCcccHHHHh----cCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GG-ADDLFIGDIRDSNSIIPAI----QGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~-~~~~v~~Dl~d~~~~~~~l----~~~d~Vi~~  154 (331)
                      .+++|||+||+|.||..+++.+...  |++|++++|++++.+.+ .. +.. ...|..+.+....+.    .++|+||++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~  225 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEELGFD-GAIDYKNEDLAAGLKRECPKGIDVFFDN  225 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCCS-EEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCC-EEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence            3678999999999999999999998  99999999998876655 32 232 234666655333332    269999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      +|
T Consensus       226 ~g  227 (336)
T 4b7c_A          226 VG  227 (336)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.80  E-value=1.6e-05  Score=72.20  Aligned_cols=73  Identities=7%  Similarity=-0.009  Sum_probs=54.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH---hc--CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA---IQ--GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~---l~--~~d~Vi~~a  155 (331)
                      +.+|||+||+|.||..+++.+...  |++|++++|++++.+.+.. ... ...|..+.+...++   ..  ++|+||+++
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  239 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKLGAA-AGFNYKKEDFSEATLKFTKGAGVNLILDCI  239 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCc-EEEecCChHHHHHHHHHhcCCCceEEEECC
Confidence            578999999999999999999999  9999999998876554421 122 23466665433333   22  689999999


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      |.
T Consensus       240 G~  241 (354)
T 2j8z_A          240 GG  241 (354)
T ss_dssp             CG
T ss_pred             Cc
Confidence            84

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.79  E-value=2.4e-05  Score=69.66  Aligned_cols=75  Identities=13%  Similarity=0.065  Sum_probs=58.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecC---CchhhhcCC------CCcEEEccCCCcccHHHHhcCCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRT---EESKQKIGG------ADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~---~~~~~~l~~------~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      ..+++++|+|+ |.+|+.++..|.+.  |. +|+++.|+   .++.+++..      ...+...++.+.+++.+.+.++|
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~--Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD  228 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALD--GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV  228 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHC--CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence            35789999997 89999999999999  98 89999999   555544321      13345567777777888889999


Q ss_pred             EEEEcccC
Q 046297          150 ALIILTSA  157 (331)
Q Consensus       150 ~Vi~~ag~  157 (331)
                      +||++...
T Consensus       229 iIINaTp~  236 (315)
T 3tnl_A          229 IFTNATGV  236 (315)
T ss_dssp             EEEECSST
T ss_pred             EEEECccC
Confidence            99998754

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.79  E-value=6.6e-05  Score=64.81  Aligned_cols=67  Identities=21%  Similarity=0.215  Sum_probs=54.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .+ +|+|+|+ |..|+.++..|++.  |. +|+++.|++++.+++.......     ..+++.++++++|+||++..
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~~~~~-----~~~~~~~~~~~aDiVInatp  175 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFPVKIF-----SLDQLDEVVKKAKSLFNTTS  175 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSSCEEE-----EGGGHHHHHHTCSEEEECSS
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHcccC-----CHHHHHhhhcCCCEEEECCC
Confidence            35 8999996 99999999999999  88 8999999998888776654432     23456777889999999875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.78  E-value=2.2e-05  Score=71.35  Aligned_cols=71  Identities=18%  Similarity=0.145  Sum_probs=53.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHh---c-CCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAI---Q-GIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l---~-~~d~Vi~~a  155 (331)
                      ++|||+||+|.||..+++.+...  |+ +|++++|++++.+.+..  +.. ...|..+.+....+.   . ++|+||+++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi~~~  238 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSELGFD-AAINYKKDNVAEQLRESCPAGVDVYFDNV  238 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence            78999999999999999999999  99 99999998776554432  222 235776654322222   2 699999999


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       239 G  239 (357)
T 2zb4_A          239 G  239 (357)
T ss_dssp             C
T ss_pred             C
Confidence            8

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.77  E-value=6e-05  Score=65.64  Aligned_cols=76  Identities=22%  Similarity=0.217  Sum_probs=48.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |.+++|.|+|++|.+|+.+++.+.+.+ ++++++ ++|+.+...... ..+.-+..++.-.+++.++++++|+||++..
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~-~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~   82 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAP-DATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL   82 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCT-TEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC
Confidence            557899999999999999999998863 888887 466543211100 0000000123334567777778999998874

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.76  E-value=6.5e-06  Score=64.72  Aligned_cols=70  Identities=19%  Similarity=0.158  Sum_probs=53.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .++|+|+|+ |.+|+.+++.|.+.  |++|++.+|++++.+.+.....   .+....+++.++++++|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~~---~~~~~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKYE---YEYVLINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHHT---CEEEECSCHHHHHHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHhC---CceEeecCHHHHhcCCCEEEEeCCC
Confidence            678999996 99999999999998  9999999999877665432211   1112234567788899999999875

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.75  E-value=4.7e-05  Score=66.85  Aligned_cols=72  Identities=18%  Similarity=0.148  Sum_probs=55.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-------CCcEEEccCCCcccHHHHhcCCCEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-------ADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-------~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      ...++++|+|+ |.+|+.++..|.+.  |. +|+++.|+.++.+.+..       .+.+...++   +++.+.++++|+|
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiV  198 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTH--GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGV  198 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEE
Confidence            45789999998 89999999999999  88 69999999877665422       233444443   4567778899999


Q ss_pred             EEcccC
Q 046297          152 IILTSA  157 (331)
Q Consensus       152 i~~ag~  157 (331)
                      |++...
T Consensus       199 InaTp~  204 (283)
T 3jyo_A          199 VNATPM  204 (283)
T ss_dssp             EECSST
T ss_pred             EECCCC
Confidence            998754

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.74  E-value=0.00022  Score=62.33  Aligned_cols=69  Identities=16%  Similarity=0.105  Sum_probs=54.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .+++++|+|+ |.+|+.++..|.+.  |+ +|+++.|+.++.+.+...+..+     ..+++.++++++|+||++...
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~~~~-----~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKI--VRPTLTVANRTMSRFNNWSLNINKI-----NLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCSCCEEE-----CHHHHHHTGGGCSEEEECCC-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHhcccc-----cHhhHHHHhcCCCEEEECccC
Confidence            4678999997 89999999999999  98 8999999998877766544332     234566778899999998754

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.72  E-value=4.2e-05  Score=66.81  Aligned_cols=71  Identities=18%  Similarity=0.103  Sum_probs=52.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC----cEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD----DLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~----~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ...++++|+|+ |.+|+.+++.|++.  |++|+++.|+.++.+.+...+    .+...|   .+.+.+  .++|+||+++
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~~~~--~~~DivVn~t  188 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALS---MDELEG--HEFDLIINAT  188 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECC---SGGGTT--CCCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhhccCCeeEec---HHHhcc--CCCCEEEECC
Confidence            45789999998 78999999999999  999999999987665543211    222233   333322  5899999999


Q ss_pred             cCC
Q 046297          156 SAV  158 (331)
Q Consensus       156 g~~  158 (331)
                      +..
T Consensus       189 ~~~  191 (271)
T 1nyt_A          189 SSG  191 (271)
T ss_dssp             SCG
T ss_pred             CCC
Confidence            863

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.72  E-value=7.1e-05  Score=67.64  Aligned_cols=95  Identities=12%  Similarity=0.062  Sum_probs=61.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEE----EccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLF----IGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v----~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +++|.|.||+|++|+.+++.|.++ +..+++.+.+..+....+......+    ...+.+.+   + +.++|+||.+++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~   78 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSH-PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPH   78 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCc
Confidence            478999999999999999999987 3668888877433221111100000    11122222   2 4789999999874


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      .                               ....+++.+.+.|+ ++|-.|+..
T Consensus        79 ~-------------------------------~s~~~a~~~~~aG~-~VId~Sa~~  102 (345)
T 2ozp_A           79 G-------------------------------VFAREFDRYSALAP-VLVDLSADF  102 (345)
T ss_dssp             T-------------------------------HHHHTHHHHHTTCS-EEEECSSTT
T ss_pred             H-------------------------------HHHHHHHHHHHCCC-EEEEcCccc
Confidence            1                               14567777778887 577777754

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.71  E-value=3.3e-05  Score=70.41  Aligned_cols=72  Identities=21%  Similarity=0.259  Sum_probs=52.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh-----cCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI-----QGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~  154 (331)
                      .+.+|||+||+|.+|..+++.+...  |++|++++|++++.+.+.. .... ..|..+.+ +.+.+     .++|+||++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~-~~~~~~~~~~~g~D~vid~  238 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKSLGCDR-PINYKTEP-VGTVLKQEYPEGVDVVYES  238 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSE-EEETTTSC-HHHHHHHHCTTCEEEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCCcE-EEecCChh-HHHHHHHhcCCCCCEEEEC
Confidence            3578999999999999999999998  9999999998776554332 2222 23554433 33332     268999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      +|
T Consensus       239 ~g  240 (362)
T 2c0c_A          239 VG  240 (362)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.69  E-value=0.00012  Score=66.24  Aligned_cols=73  Identities=8%  Similarity=0.102  Sum_probs=52.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHH---HHh--cCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSII---PAI--QGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~---~~l--~~~d~Vi~~a  155 (331)
                      .++|+|+||+|.+|...++.+...  |.+|+++++++++.+.+.. +... ..|..+.+...   ++.  .++|+|++++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vid~~  241 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKDIGAAH-VLNEKAPDFEATLREVMKAEQPRIFLDAV  241 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHTCSE-EEETTSTTHHHHHHHHHHHHCCCEEEESS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCCE-EEECCcHHHHHHHHHHhcCCCCcEEEECC
Confidence            368999999999999999999999  9999999998877655432 1222 23554443222   222  2799999999


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      |.
T Consensus       242 g~  243 (349)
T 3pi7_A          242 TG  243 (349)
T ss_dssp             CH
T ss_pred             CC
Confidence            83

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.68  E-value=0.00017  Score=64.95  Aligned_cols=94  Identities=21%  Similarity=0.262  Sum_probs=58.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhc-CCCCeEEEEec-C-CchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVR-T-EESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R-~-~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      +++|+|.||+|.+|+.+++.|+++ .+..+++.+.. + ..+.-.+.. ..+...|+ +++    .++++|+||.+.|. 
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g-~~i~~~~~-~~~----~~~~~DvV~~a~g~-   78 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAE-SSLRVGDV-DSF----DFSSVGLAFFAAAA-   78 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETT-EEEECEEG-GGC----CGGGCSEEEECSCH-
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCC-cceEEecC-CHH----HhcCCCEEEEcCCc-
Confidence            368999999999999999999965 12456666642 2 211111111 11111122 122    25689999999873 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                    .....+++.+.+.|++ +|-+|+..
T Consensus        79 ------------------------------~~s~~~a~~~~~aG~k-vId~Sa~~  102 (340)
T 2hjs_A           79 ------------------------------EVSRAHAERARAAGCS-VIDLSGAL  102 (340)
T ss_dssp             ------------------------------HHHHHHHHHHHHTTCE-EEETTCTT
T ss_pred             ------------------------------HHHHHHHHHHHHCCCE-EEEeCCCC
Confidence                                          1256778888888985 66667765

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.67  E-value=5e-05  Score=67.49  Aligned_cols=75  Identities=17%  Similarity=0.158  Sum_probs=55.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecC---CchhhhcCC------CCcEEEccCCCcccHHHHhcCCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRT---EESKQKIGG------ADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~---~~~~~~l~~------~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      ..++++||+|+ |.+|+.++..|.+.  |. +|+++.|+   .++.+++..      ...+...++.+.+.+.+.+.++|
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~--G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D  222 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIE--GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD  222 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHc--CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence            34789999997 99999999999999  88 89999999   555544322      12334455555444466778899


Q ss_pred             EEEEcccC
Q 046297          150 ALIILTSA  157 (331)
Q Consensus       150 ~Vi~~ag~  157 (331)
                      +||++...
T Consensus       223 iIINaTp~  230 (312)
T 3t4e_A          223 ILTNGTKV  230 (312)
T ss_dssp             EEEECSST
T ss_pred             EEEECCcC
Confidence            99998764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.67  E-value=0.00037  Score=59.95  Aligned_cols=95  Identities=15%  Similarity=0.035  Sum_probs=65.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC-------------------chhhhc-------CCCC--cEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE-------------------ESKQKI-------GGAD--DLFI  132 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~-------------------~~~~~l-------~~~~--~~v~  132 (331)
                      .++|+|+|+ |.+|+++++.|.+.  |. ++++++++.                   .+.+.+       .+.+  +.+.
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~--Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASA--GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHc--CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            568999996 89999999999999  86 788899876                   332221       2223  3334


Q ss_pred             ccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          133 GDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       133 ~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      .++. .+.+.+.++++|+||.+..                              |...-..+.++|++.++ .+|..+.
T Consensus       108 ~~~~-~~~~~~~~~~~DvVi~~~d------------------------------~~~~~~~l~~~~~~~~~-p~i~~~~  154 (249)
T 1jw9_B          108 ALLD-DAELAALIAEHDLVLDCTD------------------------------NVAVRNQLNAGCFAAKV-PLVSGAA  154 (249)
T ss_dssp             SCCC-HHHHHHHHHTSSEEEECCS------------------------------SHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             ccCC-HhHHHHHHhCCCEEEEeCC------------------------------CHHHHHHHHHHHHHcCC-CEEEeee
Confidence            4454 3456778889999999875                              34444567777888776 4555443

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.66  E-value=4.5e-05  Score=68.31  Aligned_cols=104  Identities=17%  Similarity=0.084  Sum_probs=69.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----cC-------CCCcEEEccCCCcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----IG-------GADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l~-------~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      .++|.|+|+ |.+|..++..|+..  |+  +|+++++++++.+.    +.       ..+.+...|       .++++++
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~a   74 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDA   74 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCC
Confidence            578999996 99999999999999  76  89999998765443    21       123333222       2468899


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      |+||.++|.....+.         ..      .+....|....+.+++.+.++..+-++.+-
T Consensus        75 DvVvi~ag~p~kpG~---------~R------~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvv  121 (326)
T 3pqe_A           75 DIVCICAGANQKPGE---------TR------LELVEKNLKIFKGIVSEVMASGFDGIFLVA  121 (326)
T ss_dssp             SEEEECCSCCCCTTC---------CH------HHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CEEEEecccCCCCCc---------cH------HHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence            999999986322110         00      111256777788899998887655344333

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.63  E-value=4.3e-05  Score=69.39  Aligned_cols=73  Identities=12%  Similarity=0.098  Sum_probs=54.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh----cCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI----QGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l----~~~d~Vi~~ag  156 (331)
                      ..+|||+||+|.||..+++.+...  |++|++++|++++.+.+.. .... ..|..+.+....+.    .++|+||+++|
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~g  244 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACERLGAKR-GINYRSEDFAAVIKAETGQGVDIILDMIG  244 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCCE-EEeCCchHHHHHHHHHhCCCceEEEECCC
Confidence            578999999999999999999999  9999999999877655432 1222 24555554333322    26999999998


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       245 ~  245 (353)
T 4dup_A          245 A  245 (353)
T ss_dssp             G
T ss_pred             H
Confidence            4

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.63  E-value=8.4e-05  Score=66.46  Aligned_cols=106  Identities=13%  Similarity=0.138  Sum_probs=64.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----cCC------CCcEEEccCCCcccHHHHhcCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----IGG------ADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l~~------~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      ..+||.|+|+ |.+|+.++..|+..  |.  +++++++++++.+.    +.+      .+.+...|       .++++++
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~a   77 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDA   77 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCC
Confidence            4678999996 99999999999998  66  89999998765442    211      22322222       2468899


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      |+||+.+|.....+.               .-.+..+.|....+.+.+.+.++.-+-++.+-|
T Consensus        78 DiVvi~ag~~~kpG~---------------tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           78 DLVVITAGAPQKPGE---------------TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             SEEEECCCCC-------------------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             CEEEECCCCCCCCCc---------------hHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            999999996332211               011223667777888999998876554444333

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.61  E-value=4.7e-05  Score=68.28  Aligned_cols=74  Identities=12%  Similarity=0.039  Sum_probs=54.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh---c--CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI---Q--GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l---~--~~d~Vi~~  154 (331)
                      .+.+|||+||+|.+|...++.+...  |++|+++++++++.+.+.. +.. ...|..+.+...++.   .  ++|+||++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~-~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKALGAW-ETIDYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCC-EEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence            3678999999999999999999999  9999999998877655432 122 224555544333332   2  69999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      +|.
T Consensus       217 ~g~  219 (325)
T 3jyn_A          217 VGQ  219 (325)
T ss_dssp             SCG
T ss_pred             CCh
Confidence            983

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.61  E-value=6e-05  Score=67.81  Aligned_cols=74  Identities=18%  Similarity=0.224  Sum_probs=53.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH---h--cCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA---I--QGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~---l--~~~d~Vi~~  154 (331)
                      .+.+|||+||+|.+|...++.+...  |.+|+++++++++.+.+.. +.. ...|..+.+....+   .  .++|+|+++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~-~~~~~~~~~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKEYGAE-YLINASKEDILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCc-EEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence            3678999999999999999999998  9999999998877654332 122 22455554433332   2  269999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      +|.
T Consensus       225 ~g~  227 (334)
T 3qwb_A          225 VGK  227 (334)
T ss_dssp             CGG
T ss_pred             CCh
Confidence            983

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.61  E-value=8.1e-05  Score=67.13  Aligned_cols=73  Identities=14%  Similarity=0.191  Sum_probs=53.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCccc---HHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNS---IIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~---~~~~l~~~d~Vi~~ag  156 (331)
                      .+.+|||+|| |.+|..+++.+...  |++|++++|++++.+.+.. .... ..|..+.+.   +.++..++|+||+++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADL-VVNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSE-EECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHCCCCE-EecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            3678999999 77999999999988  9999999998877654432 2332 246665432   2222257999999998


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       240 ~  240 (339)
T 1rjw_A          240 S  240 (339)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.60  E-value=6e-05  Score=72.13  Aligned_cols=71  Identities=25%  Similarity=0.171  Sum_probs=46.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC--cEEEccCCCcccHHH-HhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD--DLFIGDIRDSNSIIP-AIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~--~~v~~Dl~d~~~~~~-~l~~~d~Vi~~ag  156 (331)
                      ..+++++|+|| |++|+.++..|++.  |++|+++.|+.++.+++...+  ..+  ++.|   +.+ ....+|+||||+|
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~--G~~V~i~~R~~~~a~~la~~~~~~~~--~~~d---l~~~~~~~~DilVN~ag  433 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEK--GAKVVIANRTYERALELAEAIGGKAL--SLTD---LDNYHPEDGMVLANTTS  433 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHH--CC-CEEEESSHHHHHHHHHHTTC-CE--ETTT---TTTC--CCSEEEEECSS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCcee--eHHH---hhhccccCceEEEECCC
Confidence            34678999999 79999999999999  999999999987765543211  112  2222   222 1245899999998


Q ss_pred             CC
Q 046297          157 AV  158 (331)
Q Consensus       157 ~~  158 (331)
                      ..
T Consensus       434 vg  435 (523)
T 2o7s_A          434 MG  435 (523)
T ss_dssp             TT
T ss_pred             CC
Confidence            63

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.60  E-value=6e-05  Score=67.42  Aligned_cols=107  Identities=16%  Similarity=0.131  Sum_probs=70.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh----cC-------CCCcEEE-ccCCCcccHHHHh
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK----IG-------GADDLFI-GDIRDSNSIIPAI  145 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~----l~-------~~~~~v~-~Dl~d~~~~~~~l  145 (331)
                      +|.++||.|+|+ |.+|..++..|+..  |+ +|+++++++++.+.    +.       ....+.. .|      . +++
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~--~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~   73 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLK--ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAI   73 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGG
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhC--CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHH
Confidence            456789999998 99999999999999  77 99999999876531    11       1223321 22      2 578


Q ss_pred             cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          146 QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       146 ~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      +++|+||..+|.....+            .   .-.+....|....+.+++.+.+.+-+ .++.+|
T Consensus        74 ~~aDiVIiaag~p~k~G------------~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           74 EGADVVIVTAGVPRKPG------------M---SRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             TTCSEEEECCSCCCC--------------------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCCEEEEccCcCCCCC------------C---CHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            99999999998633211            0   01112255777788888888887644 444444

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.59  E-value=7.7e-05  Score=67.01  Aligned_cols=94  Identities=15%  Similarity=0.155  Sum_probs=61.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC---ch---hhh----cCC--CCcEEEccCCCcccHHHHhcCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE---ES---KQK----IGG--ADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~---~~---~~~----l~~--~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      |++|.|+||||++|+.+++.|.+. |++++..+.++.   ..   ..+    +.+  ...+...  .+.+   ++++++|
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~-p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~D   77 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRH-PHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVD   77 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCS
T ss_pred             ceEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCC
Confidence            578999999999999999998885 388988876554   21   111    222  1222221  0122   2337899


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      +||-+.+.                               .....++..+.+.|+ ++|-.|+..
T Consensus        78 vvf~a~p~-------------------------------~~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           78 VVFLATAH-------------------------------EVSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             EEEECSCH-------------------------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             EEEECCCh-------------------------------HHHHHHHHHHHHCCC-EEEEcCCcc
Confidence            99988862                               124667777778887 566667764

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.58  E-value=0.00043  Score=66.83  Aligned_cols=68  Identities=19%  Similarity=0.224  Sum_probs=60.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      ++|+|.|+ |.+|+++++.|.+.  |+.|+++++++++.+++.   .++.+|.+|++.+.++ ++++|.++-..+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~--g~~v~vid~d~~~~~~~~---~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRK--PVPFILIDRQESPVCNDH---VVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHT--TCCEEEEESSCCSSCCSS---CEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHC--CCCEEEEECChHHHhhcC---CEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence            78999997 99999999999999  999999999998876653   8999999999988776 468999998876

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.57  E-value=5.3e-05  Score=67.47  Aligned_cols=107  Identities=15%  Similarity=0.099  Sum_probs=68.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh----cCC-------CCcEEEccCCCcccHHHHhcCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK----IGG-------ADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~----l~~-------~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      ++||.|+|| |.+|..++..|+..  |+ +|+++++++++.+.    +..       ...+..     ..+. ++++++|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~--g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d~-~a~~~aD   72 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-----TNNY-ADTANSD   72 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-----ESCG-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-----CCCH-HHHCCCC
Confidence            368999998 99999999999998  76 89999988765543    111       122221     1223 5689999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      +||.++|.....+.       .+.        +....|....+.+.+.+.+.+.+.++.+.|-
T Consensus        73 ~Vi~a~g~p~~~g~-------~r~--------dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN  120 (309)
T 1ur5_A           73 VIVVTSGAPRKPGM-------SRE--------DLIKVNADITRACISQAAPLSPNAVIIMVNN  120 (309)
T ss_dssp             EEEECCCC---------------C--------HHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred             EEEEcCCCCCCCCC-------CHH--------HHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence            99999986332110       000        1124466677888888888776656555543

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.56  E-value=0.00043  Score=62.80  Aligned_cols=35  Identities=29%  Similarity=0.352  Sum_probs=30.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT  117 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~  117 (331)
                      +++|.|.||+|++|+.+++.|+++ ++.+|+++.++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~-p~~ev~~i~~s   42 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADH-PMFELTALAAS   42 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC-SSEEEEEEEEC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcC-CCCEEEEEEcc
Confidence            368999999999999999999887 36789888764

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.56  E-value=5.1e-05  Score=68.96  Aligned_cols=94  Identities=13%  Similarity=0.157  Sum_probs=61.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh-------cCCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-------IGGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      .+++|.|.||+|.+|+.+++.|.++ +..+++++.+..+....       +...+   ..|+.-.+  .+.++++|+||.
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~   88 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANH-PHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFC   88 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTC-SSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEE
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcC-CCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEEE
Confidence            3468999999999999999999987 36688888765322111       11111   13332222  334568999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      +++...                               +...+..+ +.|+ ++|-.|+..
T Consensus        89 atp~~~-------------------------------s~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           89 CLPHGT-------------------------------TQEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             CCCTTT-------------------------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred             cCCchh-------------------------------HHHHHHHH-hCCC-EEEECCccc
Confidence            987411                               35566667 7777 577777754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.55  E-value=7.3e-05  Score=66.23  Aligned_cols=73  Identities=14%  Similarity=0.090  Sum_probs=54.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .+.+|||+||+|.+|..+++.+...  |++|++++|++++.+.+.. ....+ .|..+.+++.+.+.++|+||+ +|.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEE-EECCcchhHHHHhcCceEEEE-CCH
Confidence            3678999999999999999999988  9999999998877654322 22222 355441335555588999999 873

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.55  E-value=0.0005  Score=58.83  Aligned_cols=73  Identities=16%  Similarity=0.296  Sum_probs=52.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhc-----CCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQ-----GIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~ag  156 (331)
                      ++|+|+|++|.+|+.+++.+.+.+ ++++++.....+.++.+ ....+ +..|++.++...+.+.     ++++|+-..|
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~-~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAAD-DLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCT-TCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence            479999999999999999988653 89998766544433332 22344 6678888887765553     7888887766


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus        79 ~   79 (245)
T 1p9l_A           79 F   79 (245)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.54  E-value=8.4e-05  Score=67.02  Aligned_cols=73  Identities=14%  Similarity=0.195  Sum_probs=53.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh---c--CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI---Q--GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l---~--~~d~Vi~~a  155 (331)
                      +.+|||+||+|.+|...++.+...  |++|+++++++++.+.+.. .... ..|..+.+...++.   .  ++|+||+++
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~~  221 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRLGAAY-VIDTSTAPLYETVMELTNGIGADAAIDSI  221 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhCCCcE-EEeCCcccHHHHHHHHhCCCCCcEEEECC
Confidence            578999999999999999999989  9999999999877655432 2222 23555544333222   2  699999999


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      |.
T Consensus       222 g~  223 (340)
T 3gms_A          222 GG  223 (340)
T ss_dssp             CH
T ss_pred             CC
Confidence            83

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.54  E-value=0.00021  Score=60.09  Aligned_cols=64  Identities=11%  Similarity=0.092  Sum_probs=51.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +++|.|+| +|.+|+.+++.|.+.  |++|++++|++++.+.+.. ++...        ++.++++++|+||.+..
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEECCC
Confidence            46799999 799999999999999  9999999999877666543 23221        46677889999998875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.54  E-value=8.2e-05  Score=67.34  Aligned_cols=72  Identities=15%  Similarity=0.182  Sum_probs=51.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcccHH---HHhc--CCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSNSII---PAIQ--GIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~---~~l~--~~d~Vi~  153 (331)
                      ...+|||+|| |.+|...++.+...  |+ +|++++|++++.+.+.. +...+ .|..+++...   ++..  ++|+||+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid  242 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVMDITDGNGVDVFLE  242 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence            4578999999 99999999999988  99 99999998776554322 22222 3555543222   2222  6999999


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      ++|
T Consensus       243 ~~g  245 (348)
T 2d8a_A          243 FSG  245 (348)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            998

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.53  E-value=4.2e-05  Score=67.70  Aligned_cols=76  Identities=20%  Similarity=0.127  Sum_probs=55.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      ...++|+|+|+ |.+|+.++..|++.  |+ +|++..|++++.+.+...+.....++.+.+++.+.+.++|+||++.+..
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCC
Confidence            45789999997 88999999999999  97 9999999987766543211000001112345677788999999999853

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.52  E-value=0.00017  Score=65.12  Aligned_cols=71  Identities=13%  Similarity=0.141  Sum_probs=52.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh-----cCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI-----QGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~  154 (331)
                      .+.+|||+|| |.+|...++.+...  |+ +|+++++++++.+.+... .-...|..+.+ +.+.+     .++|+||++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~-~~~~~~~~~~~g~D~vid~  238 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-ADRLVNPLEED-LLEVVRRVTGSGVEVLLEF  238 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-CSEEECTTTSC-HHHHHHHHHSSCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-HHhccCcCccC-HHHHHHHhcCCCCCEEEEC
Confidence            4578999999 99999999999888  99 999999998776655432 22234555533 33333     269999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      +|
T Consensus       239 ~g  240 (343)
T 2dq4_A          239 SG  240 (343)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.52  E-value=0.0003  Score=61.30  Aligned_cols=69  Identities=19%  Similarity=0.084  Sum_probs=49.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCC---cEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGAD---DLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~---~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..++++|+|+ |.+|+.++..|.+.  |. +|+++.|+.++.+++...+   .+...++.+   +..  .++|+||++..
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~~--~~~DivInaTp  190 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQA--GPSELVIANRDMAKALALRNELDHSRLRISRYEA---LEG--QSFDIVVNATS  190 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHT--CCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GTT--CCCSEEEECSS
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hcc--cCCCEEEECCC
Confidence            4789999997 89999999999999  95 8999999987766543221   122223322   222  68999999875


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       191 ~  191 (272)
T 3pwz_A          191 A  191 (272)
T ss_dssp             G
T ss_pred             C
Confidence            4

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.52  E-value=0.00022  Score=66.86  Aligned_cols=72  Identities=17%  Similarity=0.255  Sum_probs=53.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCc-EE-------------EccCCCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD-LF-------------IGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~-~v-------------~~Dl~d~~~~~~~l~~~  148 (331)
                      |+|.|+|+ |++|..++..|.+.  |++|++++|++++.+.+..+.. +.             .+.+.-..++.++++++
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a   79 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA   79 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence            68999985 99999999999999  9999999999887766533211 11             11122234567788899


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |+||.+.+.
T Consensus        80 DvViiaVpt   88 (450)
T 3gg2_A           80 DIIFIAVGT   88 (450)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEEcCC
Confidence            999999864

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.49  E-value=0.00061  Score=64.02  Aligned_cols=96  Identities=24%  Similarity=0.422  Sum_probs=73.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      ..++|+|.|| |.+|.++++.| ++  +++|.++.+++++.+.+.   ++..++.+|.+|++.+.++ ++.+|+++-+.+
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L-~~--~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~  309 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRL-EQ--TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTN  309 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHH-TT--TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred             cccEEEEEcc-hHHHHHHHHHh-hh--cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEccc
Confidence            3578999996 99999999987 55  699999999988766543   3578999999999987765 578999998876


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      .                          .+.|+    -..-.|++.|+++.|-.-
T Consensus       310 ~--------------------------De~Ni----~~~llAk~~gv~kvIa~v  333 (461)
T 4g65_A          310 E--------------------------DETNI----MSAMLAKRMGAKKVMVLI  333 (461)
T ss_dssp             C--------------------------HHHHH----HHHHHHHHTTCSEEEEEC
T ss_pred             C--------------------------cHHHH----HHHHHHHHcCCccccccc
Confidence            3                          03343    344457889999887643

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.48  E-value=7.6e-05  Score=68.00  Aligned_cols=73  Identities=16%  Similarity=0.021  Sum_probs=55.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .++|+|+|+ |.+|..+++.|...  |.+|++++|++++.+.+... ...+..+..+.+++.+.+.++|+||++++.
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence            478999998 99999999999999  99999999998776554211 011111223445677788899999999975

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.46  E-value=0.00046  Score=64.32  Aligned_cols=95  Identities=15%  Similarity=0.107  Sum_probs=65.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC---eEEEEecCCchhhhcC-CCCcEEEccCCCc---ccHHHHhcCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY---AARGLVRTEESKQKIG-GADDLFIGDIRDS---NSIIPAIQGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~---~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~---~~~~~~l~~~d~Vi~~  154 (331)
                      +++|+|+| .|.||+.++..|+++. ++   +|++.+......+... .++.+...++++.   +.+.+++++.|+|||+
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~-dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~   90 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKF-DIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDV   90 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHB-CCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEEC
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCC-CCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEEC
Confidence            46799999 6999999999999974 55   6888877654322111 1356777777544   3355677777999985


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccC
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM  212 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~  212 (331)
                      +-.                           .    ....++++|.++|+ .+  +.++
T Consensus        91 s~~---------------------------~----~~l~Im~acleaGv-~Y--lDTa  114 (480)
T 2ph5_A           91 SIG---------------------------I----SSLALIILCNQKGA-LY--INAA  114 (480)
T ss_dssp             CSS---------------------------S----CHHHHHHHHHHHTC-EE--EESS
T ss_pred             Ccc---------------------------c----cCHHHHHHHHHcCC-CE--EECC
Confidence            522                           1    14689999999998 44  4554

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.46  E-value=0.00027  Score=66.07  Aligned_cols=72  Identities=15%  Similarity=0.192  Sum_probs=53.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEE-------------EccCCCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLF-------------IGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v-------------~~Dl~d~~~~~~~l~~~  148 (331)
                      |+|.|+| .|++|..++..|.+.  |++|++++|++++.+.+... ..+.             .+.+.-..++.++++++
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~a   77 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS   77 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccC
Confidence            4799998 699999999999999  99999999998877765432 1111             11122234566678899


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |+||.+...
T Consensus        78 DvviiaVpt   86 (436)
T 1mv8_A           78 DVSFICVGT   86 (436)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEEcCC
Confidence            999999863

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.46  E-value=0.00019  Score=64.56  Aligned_cols=117  Identities=12%  Similarity=-0.016  Sum_probs=71.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhc----CCCCcE--EEccCCCcccHHHHhcCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKI----GGADDL--FIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l----~~~~~~--v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      .++|.|+|| |.+|..++..|...  |+ +|+++++++++.+..    .+....  ....+.-..++.++++++|+||..
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~--g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a   85 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVT   85 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEc
Confidence            468999998 99999999999999  88 999999998665441    110000  011111124566688999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      +|.....+.          +..--...+....|+...+.+++.+.+..-+-++.+.|
T Consensus        86 ~g~p~~~g~----------~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           86 AGLTKVPGK----------PDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             CSCSSCTTC----------CGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cCCCCCCCc----------ccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            985322110          00000001112456667788888888775443444443

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.45  E-value=0.00059  Score=61.33  Aligned_cols=94  Identities=16%  Similarity=0.151  Sum_probs=60.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcC-CCCeEEEEecC--CchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERS-EQYAARGLVRT--EESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~-~g~~V~~l~R~--~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      +++|.|.||+|.+|+.+++.|++++ |..+++++...  ..+.-.+.. ..+...|+ +++    .++++|+||.+.|. 
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~-~~i~~~~~-~~~----~~~~vDvVf~a~g~-   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNG-KTVRVQNV-EEF----DWSQVHIALFSAGG-   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETT-EEEEEEEG-GGC----CGGGCSEEEECSCH-
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecC-ceeEEecC-ChH----HhcCCCEEEECCCc-
Confidence            5789999999999999999999872 36778877632  211111211 11111222 122    23689999999873 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                    ......++.+.+.|+ ++|-.|+..
T Consensus        76 ------------------------------~~s~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           76 ------------------------------ELSAKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             ------------------------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             ------------------------------hHHHHHHHHHHHcCC-EEEEcCCcc
Confidence                                          125667777888887 566677764

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.42  E-value=7.5e-05  Score=65.78  Aligned_cols=73  Identities=16%  Similarity=0.100  Sum_probs=52.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCc-------EEEccCCCcccHHHHhcCCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD-------LFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~-------~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      ...++++|+|++ .+|+.+++.|++.  | +|+++.|+.++.+.+...+.       .+.+|+.+.   .+.+.++|+||
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~DilV  198 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDIII  198 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEEE
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEEE
Confidence            457899999985 9999999999999  9 99999999776554422110       112344332   34567899999


Q ss_pred             EcccCCC
Q 046297          153 ILTSAVP  159 (331)
Q Consensus       153 ~~ag~~~  159 (331)
                      ++++...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9998643

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.41  E-value=0.00012  Score=67.10  Aligned_cols=74  Identities=14%  Similarity=0.118  Sum_probs=56.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+++|+|+|+ |.||..+++.+...  |++|++++|++++.+.+..  ...+ ..+..+.+++.+.++++|+||.+++.
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g~~~-~~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFCGRI-HTRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSS-EEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcCCee-EeccCCHHHHHHHHcCCCEEEECCCc
Confidence            44689999998 99999999999999  9999999999876554321  1111 22334456688888899999998874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.40  E-value=0.00028  Score=64.32  Aligned_cols=73  Identities=19%  Similarity=0.170  Sum_probs=56.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-C-CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-G-ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...+|||+|+ |.||..+++.+...  |++|+++++++++.+.+. . .... ..|..+.+.+.++..++|+||+++|.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCc
Confidence            4578999996 99999999999988  999999999887765432 2 2332 24666766677766789999999984

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.39  E-value=0.0012  Score=59.75  Aligned_cols=94  Identities=16%  Similarity=0.052  Sum_probs=60.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe--cCCc--hhhhcCCC----------CcEEEccCCCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV--RTEE--SKQKIGGA----------DDLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~--R~~~--~~~~l~~~----------~~~v~~Dl~d~~~~~~~l~~  147 (331)
                      +++|.|.||+|++|+.+++.|.+. |..+++++.  +...  ......+.          ......|+ |++.    +++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~~~   77 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKH-PYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----HKD   77 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----GTT
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhC-CCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----hcC
Confidence            568999999999999999998876 377888886  2211  11111110          11111232 2332    368


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      +|+||.+.+.                               .....++..+.++|++ +|-.|+..
T Consensus        78 vDvVf~atp~-------------------------------~~s~~~a~~~~~aG~~-VId~s~~~  111 (350)
T 2ep5_A           78 VDVVLSALPN-------------------------------ELAESIELELVKNGKI-VVSNASPF  111 (350)
T ss_dssp             CSEEEECCCH-------------------------------HHHHHHHHHHHHTTCE-EEECSSTT
T ss_pred             CCEEEECCCh-------------------------------HHHHHHHHHHHHCCCE-EEECCccc
Confidence            9999988762                               1256678888888874 66666654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.39  E-value=0.00017  Score=65.08  Aligned_cols=73  Identities=19%  Similarity=0.250  Sum_probs=51.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCC-C-cccHHHHhc--CCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIR-D-SNSIIPAIQ--GIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~-d-~~~~~~~l~--~~d~Vi~~ag  156 (331)
                      +.+|||+||+|.+|...++.+...  |++|+++++++++.+.+.. ....+ .|.. + .+.+.+...  ++|+||+++|
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~v-~~~~~~~~~~v~~~~~~~g~Dvvid~~g  236 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSVGADIV-LPLEEGWAKAVREATGGAGVDMVVDPIG  236 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEE-EESSTTHHHHHHHHTTTSCEEEEEESCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCcEE-ecCchhHHHHHHHHhCCCCceEEEECCc
Confidence            578999999999999999999999  9999999998877654322 12222 2333 1 122333332  5999999998


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       237 ~  237 (342)
T 4eye_A          237 G  237 (342)
T ss_dssp             -
T ss_pred             h
Confidence            4

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.36  E-value=0.0012  Score=51.28  Aligned_cols=86  Identities=14%  Similarity=0.179  Sum_probs=59.5

Q ss_pred             CCeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      .++|.|+|++   |.+|..+++.|++.  ||+|+.+.++.++.   .        .+.-..++.++.+.+|+++-+..  
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i---~--------G~~~~~s~~el~~~vDlvii~vp--   78 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI---E--------GLKCYRSVRELPKDVDVIVFVVP--   78 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE---T--------TEECBSSGGGSCTTCCEEEECSC--
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE---C--------CeeecCCHHHhCCCCCEEEEEeC--
Confidence            4679999997   89999999999999  99977777654322   1        11112233444557899988764  


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                                                   -.....+++.+.+.|++.++..++
T Consensus        79 -----------------------------~~~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           79 -----------------------------PKVGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             -----------------------------HHHHHHHHHHHHHTTCCEEEECTT
T ss_pred             -----------------------------HHHHHHHHHHHHHcCCCEEEEcCc
Confidence                                         133566777777889988776553

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.36  E-value=0.00051  Score=61.01  Aligned_cols=109  Identities=18%  Similarity=0.096  Sum_probs=68.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhc-CCCCeEEEEecCCchhh----hcCCC-C--cEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVRTEESKQ----KIGGA-D--DLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R~~~~~~----~l~~~-~--~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      |||.|+||+|.+|..++..|..+ +...+++++++++ +..    .+.+. .  .+... ..  +...+.++++|+||..
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence            58999999999999999998875 3346899999876 221    12221 1  11110 00  1234678999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      +|.....+.        .-       .+..+.|....+.+.+.+.++.-+ .++.+|
T Consensus        77 ag~~rkpG~--------~R-------~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           77 AGVARKPGM--------DR-------SDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             CSCSCCTTC--------CH-------HHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCCCCC--------CH-------HHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            986433211        00       111256777788888888887644 444444

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.32  E-value=0.00021  Score=62.68  Aligned_cols=72  Identities=18%  Similarity=0.159  Sum_probs=51.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC------------cEEE-------ccCCCcccHH
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD------------DLFI-------GDIRDSNSII  142 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~------------~~v~-------~Dl~d~~~~~  142 (331)
                      .++|.|+|+ |.+|..+++.|++.  |++|++.+|+++..+.....+            ....       ..+.-..++.
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~   80 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA   80 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence            578999986 99999999999999  999999999987655432110            0000       0011134566


Q ss_pred             HHhcCCCEEEEccc
Q 046297          143 PAIQGIDALIILTS  156 (331)
Q Consensus       143 ~~l~~~d~Vi~~ag  156 (331)
                      ++++++|+||.+..
T Consensus        81 ~~~~~aDlVi~av~   94 (283)
T 4e12_A           81 QAVKDADLVIEAVP   94 (283)
T ss_dssp             HHTTTCSEEEECCC
T ss_pred             HHhccCCEEEEecc
Confidence            77889999999985

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.32  E-value=0.00025  Score=64.02  Aligned_cols=75  Identities=27%  Similarity=0.334  Sum_probs=53.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCccc---HHHHh--cCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNS---IIPAI--QGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~---~~~~l--~~~d~Vi~~  154 (331)
                      ..++|||+||+|.||..+++.+.... |++|+++++++++.+.+.. .... ..|..+.+.   +.++.  .++|+||++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~  247 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKRAGADY-VINASMQDPLAEIRRITESKGVDAVIDL  247 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHhCCCE-EecCCCccHHHHHHHHhcCCCceEEEEC
Confidence            35789999999999999999888763 6899999998876554322 1222 236665543   44444  369999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      +|.
T Consensus       248 ~g~  250 (347)
T 1jvb_A          248 NNS  250 (347)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            984

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.32  E-value=0.00098  Score=59.49  Aligned_cols=68  Identities=16%  Similarity=0.179  Sum_probs=53.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+|+|.|+|. |.+|..+++.|++.  |++|++.+|++++.+.+...-      +.-..++.++++++|+||-+..
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~g------~~~~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEA--GYALQVWNRTPARAASLAALG------ATIHEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTT------CEEESSHHHHHTTCSEEEECCS
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHCC------CEeeCCHHHHHhcCCEEEEECC
Confidence            34679999985 99999999999999  999999999988877654421      1112456677888999988874

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.30  E-value=0.00036  Score=62.81  Aligned_cols=106  Identities=19%  Similarity=0.090  Sum_probs=66.1

Q ss_pred             hccCCCCeEEEECCCChhHHHHHHHHHhcCC-C----CeEEEEecCCch--hhh----cCC---C--CcEEEccCCCccc
Q 046297           77 VLSMAKSTVLVTGAGGRTGQIVYKKLKERSE-Q----YAARGLVRTEES--KQK----IGG---A--DDLFIGDIRDSNS  140 (331)
Q Consensus        77 ~~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~-g----~~V~~l~R~~~~--~~~----l~~---~--~~~v~~Dl~d~~~  140 (331)
                      +.++...||.|+||+|.||+.|+-.|..... |    .++.+++..+..  .+.    +..   .  ...+.     ..+
T Consensus        19 ~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~-----~~~   93 (345)
T 4h7p_A           19 PGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVV-----TAD   93 (345)
T ss_dssp             ---CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEE-----ESC
T ss_pred             CCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEE-----cCC
Confidence            4455567999999999999999998887510 1    268888876532  111    111   1  11121     123


Q ss_pred             HHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC
Q 046297          141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG  202 (331)
Q Consensus       141 ~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~  202 (331)
                      ..++++++|+||..||.....+.        .-       .+..+.|....+.+.+++.++.
T Consensus        94 ~~~a~~~advVvi~aG~prkpGm--------tR-------~DLl~~Na~I~~~~~~~i~~~a  140 (345)
T 4h7p_A           94 PRVAFDGVAIAIMCGAFPRKAGM--------ER-------KDLLEMNARIFKEQGEAIAAVA  140 (345)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTC--------CH-------HHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hHHHhCCCCEEEECCCCCCCCCC--------CH-------HHHHHHhHHHHHHHHHHHHhhc
Confidence            56789999999999997544221        01       1123678888888888887764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.30  E-value=0.00016  Score=63.10  Aligned_cols=70  Identities=26%  Similarity=0.170  Sum_probs=50.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC----cEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD----DLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~----~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ...++|+|+|+ |.+|+.++..|++.  |++|+++.|+.++.+++...+    .+...|+   +++.+  .++|+||+++
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~~--~~~DivIn~t  188 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIPL--QTYDLVINAT  188 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCCC--SCCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhcc--CCCCEEEECC
Confidence            34689999998 88999999999999  899999999987765543211    1222333   11111  3899999999


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      +.
T Consensus       189 ~~  190 (272)
T 1p77_A          189 SA  190 (272)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.29  E-value=0.00034  Score=62.46  Aligned_cols=107  Identities=11%  Similarity=0.051  Sum_probs=70.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh----cCC-------CCcEEEccCCCcccHHHHhcC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK----IGG-------ADDLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~----l~~-------~~~~v~~Dl~d~~~~~~~l~~  147 (331)
                      |.+++|.|+|+ |.+|..++..|+..  +. +|+++++++++.+.    +.+       ...+...+  |    .+++++
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~--~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~   73 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIK--QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLEN   73 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhC--CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCC
Confidence            44679999995 99999999999998  66 99999999876432    211       22332111  1    257899


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      +|+||..+|.....+            ..   -.+....|....+.+++.+.+..-+ .++.+|
T Consensus        74 aDvVIi~ag~p~k~G------------~~---R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           74 SDVVIVTAGVPRKPG------------MS---RDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             CSEEEECCSCCCCTT------------CC---HHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEcCCcCCCCC------------CC---HHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            999999998632211            10   0111245777788888888887644 444443

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.27  E-value=0.00066  Score=60.00  Aligned_cols=36  Identities=31%  Similarity=0.372  Sum_probs=31.8

Q ss_pred             CCCe-EEEE-CCC-----------------ChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           81 AKST-VLVT-GAG-----------------GRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        81 ~~~~-VlVt-Gat-----------------G~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      .+++ |||| |||                 |..|.++++.++++  |++|+.+.|..
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~--Ga~V~lv~g~~   89 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAA--GYGVLFLYRAR   89 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHT--TCEEEEEEETT
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHC--CCEEEEEecCC
Confidence            4566 9999 788                 99999999999999  99999999964

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.25  E-value=0.00016  Score=63.71  Aligned_cols=104  Identities=12%  Similarity=0.040  Sum_probs=69.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----c-------CCCCcEEEccCCCcccHHHHhcCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----I-------GGADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l-------~~~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      |||.|+|+ |.+|..++..|+..  |+  +|+++++++++.+.    +       .....+...     .+ .++++++|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-----~d-~~a~~~aD   71 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----AD-YSLLKGSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SC-GGGGTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-----CC-HHHhCCCC
Confidence            58999999 99999999999999  77  89999998866431    1       111222211     12 45789999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      +||..+|.....+            ..   -.+....|....+.+.+.+.+.+-+ .++.+|
T Consensus        72 iVViaag~~~kpG------------~~---R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           72 IIVVTAGLARKPG------------MT---RLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EEEECCCCCCCSS------------CC---HHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEECCCCCCCCC------------Cc---HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9999998633211            00   0111255777788888888887644 444444

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.24  E-value=0.0008  Score=60.83  Aligned_cols=73  Identities=22%  Similarity=0.146  Sum_probs=51.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCC-cc---cHHHHh-----cCCCE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRD-SN---SIIPAI-----QGIDA  150 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d-~~---~~~~~l-----~~~d~  150 (331)
                      ...+|||+|+ |.+|...++.+...  |++|+++++++++.+.+.. .... ..|..+ .+   .+.+..     .++|+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~  243 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNV  243 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHhCCCE-EEcCcccccHHHHHHHHhccccCCCCCE
Confidence            3678999997 99999999988888  9999999998877554322 2222 234443 33   344433     36999


Q ss_pred             EEEcccC
Q 046297          151 LIILTSA  157 (331)
Q Consensus       151 Vi~~ag~  157 (331)
                      ||+++|.
T Consensus       244 vid~~g~  250 (352)
T 1e3j_A          244 TIDCSGN  250 (352)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999983

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=97.23  E-value=0.0073  Score=52.92  Aligned_cols=88  Identities=23%  Similarity=0.259  Sum_probs=59.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~  158 (331)
                      .++|+|.|++|..|+.+++.|++.  |++++. +..... -++        ..++.-..++.++.+  ++|+++.+..  
T Consensus         7 ~~~VaVvGasG~~G~~~~~~l~~~--g~~~v~~VnP~~~-g~~--------i~G~~vy~sl~el~~~~~~Dv~Ii~vp--   73 (288)
T 1oi7_A            7 ETRVLVQGITGREGQFHTKQMLTY--GTKIVAGVTPGKG-GME--------VLGVPVYDTVKEAVAHHEVDASIIFVP--   73 (288)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECTTCT-TCE--------ETTEEEESSHHHHHHHSCCSEEEECCC--
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHc--CCeEEEEECCCCC-Cce--------ECCEEeeCCHHHHhhcCCCCEEEEecC--
Confidence            468999999999999999999998  998553 333221 011        011111234666666  8999998864  


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                                                   -..+..+++.|.+.|++.+|.+++
T Consensus        74 -----------------------------~~~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           74 -----------------------------APAAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             -----------------------------HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred             -----------------------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence                                         233677888888999987776553

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=97.21  E-value=0.002  Score=50.07  Aligned_cols=105  Identities=18%  Similarity=0.240  Sum_probs=66.7

Q ss_pred             CCeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .++|.|.|++   |.+|..+++.|++.  ||+|+.+  ++.+ .+++.        .+.-..++.++-+.+|.++.+...
T Consensus        13 p~~vaVvGas~~~g~~G~~~~~~l~~~--G~~v~~v--np~~~~~~i~--------G~~~~~sl~el~~~vDlavi~vp~   80 (140)
T 1iuk_A           13 AKTIAVLGAHKDPSRPAHYVPRYLREQ--GYRVLPV--NPRFQGEELF--------GEEAVASLLDLKEPVDILDVFRPP   80 (140)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHT--TCEEEEE--CGGGTTSEET--------TEECBSSGGGCCSCCSEEEECSCH
T ss_pred             CCEEEEECCCCCCCChHHHHHHHHHHC--CCEEEEe--CCCcccCcCC--------CEEecCCHHHCCCCCCEEEEEeCH
Confidence            4679999998   89999999999999  9985554  4432 11111        111112233334578998887642


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHH
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAE  237 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e  237 (331)
                                                     ..+..+++.|.+.|++.+++.++..                   ...+.
T Consensus        81 -------------------------------~~~~~v~~~~~~~gi~~i~~~~g~~-------------------~~~~~  110 (140)
T 1iuk_A           81 -------------------------------SALMDHLPEVLALRPGLVWLQSGIR-------------------HPEFE  110 (140)
T ss_dssp             -------------------------------HHHTTTHHHHHHHCCSCEEECTTCC-------------------CHHHH
T ss_pred             -------------------------------HHHHHHHHHHHHcCCCEEEEcCCcC-------------------HHHHH
Confidence                                           3356677888888998876543221                   12345


Q ss_pred             HHHHhcCCCEE
Q 046297          238 QYLADSGIPYT  248 (331)
Q Consensus       238 ~~~~~~~~~~~  248 (331)
                      +++++.|+++.
T Consensus       111 ~~a~~~Gir~v  121 (140)
T 1iuk_A          111 KALKEAGIPVV  121 (140)
T ss_dssp             HHHHHTTCCEE
T ss_pred             HHHHHcCCEEE
Confidence            56677888754

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.19  E-value=0.00033  Score=65.56  Aligned_cols=41  Identities=20%  Similarity=0.271  Sum_probs=36.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI  124 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l  124 (331)
                      +.+|||+||+|.||...++.+...  |.+|+++++++++.+.+
T Consensus       221 g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          221 GDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH
Confidence            578999999999999999999998  99999999988776554

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.19  E-value=0.0024  Score=57.17  Aligned_cols=107  Identities=12%  Similarity=0.081  Sum_probs=71.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----cCC------CCcEEEccCCCcccHHHHhcC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----IGG------ADDLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l~~------~~~~v~~Dl~d~~~~~~~l~~  147 (331)
                      ...++|.|+|+ |.+|..++..|+.+  |.  +++++++++++.+.    +.+      ...++..+  |.    +.+++
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~----~~~~~   87 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMK--DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY----SVTAN   87 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----GGGTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----HHhCC
Confidence            34678999997 99999999999998  66  89999998754432    111      11222221  22    25889


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      +|+||.++|.....+.        .       -.+..+.|....+.+.+.+.++.-+ .++.+|
T Consensus        88 aDiVvi~aG~~~kpG~--------t-------R~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           88 SKLVIITAGARQQEGE--------S-------RLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEEEEECCSCCCCTTC--------C-------GGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCEEEEccCCCCCCCc--------c-------HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999999997433211        0       1122367888888899988887544 444444

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.19  E-value=0.00041  Score=63.16  Aligned_cols=70  Identities=19%  Similarity=0.235  Sum_probs=51.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC---chhhhcCC-CCcEEEccCCC--cccHHHHhcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE---ESKQKIGG-ADDLFIGDIRD--SNSIIPAIQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~---~~~~~l~~-~~~~v~~Dl~d--~~~~~~~l~~~d~Vi~~a  155 (331)
                      +.+|||+|| |.+|..+++.+...  |++|++++|++   ++.+.+.. +...+  | .+  .+.+.+.-.++|+||+++
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~  254 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDAT  254 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECC
Confidence            678999999 99999999999999  99999999988   66543322 24444  5 54  122222114799999999


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      |.
T Consensus       255 g~  256 (366)
T 2cdc_A          255 GA  256 (366)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.18  E-value=0.00087  Score=60.95  Aligned_cols=94  Identities=13%  Similarity=0.193  Sum_probs=56.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC---eEEEEecCCchh--hhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY---AARGLVRTEESK--QKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~---~V~~l~R~~~~~--~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |++|.|.||+|++|+.+++.|+++. ++   .++.+..+....  ..+.+ ..+...|..+++.    ++++|+||.+.|
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~-~~~~v~i~~~~~~s~G~~v~~~~g-~~i~~~~~~~~~~----~~~~DvVf~a~g   74 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEER-DFDAIRPVFFSTSQLGQAAPSFGG-TTGTLQDAFDLEA----LKALDIIVTCQG   74 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-GGGGSEEEEEESSSTTSBCCGGGT-CCCBCEETTCHHH----HHTCSEEEECSC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcC-CCCeEEEEEEEeCCCCCCccccCC-CceEEEecCChHH----hcCCCEEEECCC
Confidence            3689999999999999999555541 43   455555432111  01111 1222223333333    468999999987


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeE-EEEccC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQI-VLVGSM  212 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~-v~~SS~  212 (331)
                      .                               ......+..+.+.|+|++ |=.|+.
T Consensus        75 ~-------------------------------~~s~~~a~~~~~~G~k~vVID~ss~  100 (367)
T 1t4b_A           75 G-------------------------------DYTNEIYPKLRESGWQGYWIDAASS  100 (367)
T ss_dssp             H-------------------------------HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             c-------------------------------hhHHHHHHHHHHCCCCEEEEcCChh
Confidence            3                               235677777888898644 433443

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.18  E-value=0.00044  Score=62.59  Aligned_cols=73  Identities=18%  Similarity=0.150  Sum_probs=52.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEc-------cC-CCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIG-------DI-RDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~-------Dl-~d~~~~~~~l~~~d~Vi  152 (331)
                      +|+|.|+|+ |.+|..++..|.+.  |++|++++|++++.+.+... ...+..       .+ ...+++.++++++|+||
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi   80 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL   80 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEE
Confidence            478999996 99999999999999  99999999988766554321 111111       11 11345667778999999


Q ss_pred             EcccC
Q 046297          153 ILTSA  157 (331)
Q Consensus       153 ~~ag~  157 (331)
                      .+...
T Consensus        81 ~~v~~   85 (359)
T 1bg6_A           81 IVVPA   85 (359)
T ss_dssp             ECSCG
T ss_pred             EeCCc
Confidence            88753

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.17  E-value=0.00032  Score=62.59  Aligned_cols=109  Identities=15%  Similarity=0.062  Sum_probs=69.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC-------CCCcEEEccCCCcccHHHHhcCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG-------GADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~-------~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      |..+||.|+|| |.+|..++..|+.++...+|+++++++++.+.    +.       ..+.+. .|  +    .++++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~a~~~a   75 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YSDCHDA   75 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HHHhCCC
Confidence            34579999998 99999999999988212589999988654432    11       122222 22  1    4568999


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      |+||..+|.....+.        .-.       +....|+...+.+.+.+++..-+-++.+.|
T Consensus        76 DvVvi~ag~~~~~g~--------~r~-------dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           76 DLVVICAGAAQKPGE--------TRL-------DLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             SEEEECCCCCCCTTC--------CHH-------HHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEECCCCCCCCCC--------cHH-------HHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999999986322110        000       112456667788888888876554444444

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.17  E-value=0.00037  Score=61.13  Aligned_cols=65  Identities=20%  Similarity=0.328  Sum_probs=50.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +|+|.|+|++|.+|..+++.|++.  |++|++.+|++++.+.+.. ++     +..+   ..++++++|+||.+..
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g~-----~~~~---~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMGI-----PLTD---GDGWIDEADVVVLALP   76 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTTC-----CCCC---SSGGGGTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcCC-----CcCC---HHHHhcCCCEEEEcCC
Confidence            468999999999999999999999  9999999999876655432 12     1222   2346778999998874

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.16  E-value=0.00064  Score=59.37  Aligned_cols=69  Identities=23%  Similarity=0.199  Sum_probs=53.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..++|+|+|+ |.+|+.+++.|++.  |++|++++|++++.+.+.....+...+     ++.++++++|+||++...
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~g~~~~~-----~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKFPLEVVN-----SPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTSCEEECS-----CGGGTGGGCSEEEECSST
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHcCCeeeh-----hHHhhhcCCCEEEEeCCC
Confidence            4678999996 89999999999999  889999999988777665543322221     344567889999999875

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.15  E-value=0.00052  Score=61.39  Aligned_cols=104  Identities=11%  Similarity=0.049  Sum_probs=65.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh----cCC-------CCcEEEccCCCcccHHHHhcCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK----IGG-------ADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~----l~~-------~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      ++||.|+|| |.+|..++..|+..  |+ +|+++++++++++.    +..       ...+..     ..++ ++++++|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~--g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD   74 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-----SNTY-DDLAGAD   74 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-----ECCG-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCC
Confidence            468999998 99999999999999  87 89999998876542    111       122221     1234 5689999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK  204 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk  204 (331)
                      +||..+|.....+.  ..+++.+        .+....|+...+.+++.+.+..-+
T Consensus        75 ~Vi~a~g~p~k~g~--~~qe~~r--------~dl~~~n~~i~~~i~~~i~~~~p~  119 (322)
T 1t2d_A           75 VVIVTAGFTKAPGK--SDKEWNR--------DDLLPLNNKIMIEIGGHIKKNCPN  119 (322)
T ss_dssp             EEEECCSCSSCTTC--CSTTCCG--------GGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEeCCCCCCCCC--CcccccH--------HHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999985332110  0000001        111244666677788877776544

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.14  E-value=0.00065  Score=60.47  Aligned_cols=106  Identities=15%  Similarity=0.077  Sum_probs=68.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC--chhhh----cC-------CCCcEEEccCCCcccHHHHhc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE--ESKQK----IG-------GADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~--~~~~~----l~-------~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      ..++|.|+|+ |.+|..++..|+..  |+ +|+++++++  ++.+.    +.       ....+...+  |    .+.++
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~--g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~   77 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQK--ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTA   77 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT--TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC--CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhC
Confidence            4578999997 99999999999999  88 999999983  32221    10       112222111  1    24688


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      ++|+||.++|.....+.       .+        .+....|....+.+.+.+.+++-+ .++.+|
T Consensus        78 ~aDvVIiaag~p~kpg~-------~R--------~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           78 DSDVVVITAGIARKPGM-------SR--------DDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             TCSEEEECCSCCCCTTC-------CH--------HHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCEEEEeCCCCCCCCC-------CH--------HHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            99999999986332211       00        111255777788888888887654 444444

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.14  E-value=0.00096  Score=60.88  Aligned_cols=73  Identities=14%  Similarity=0.194  Sum_probs=50.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh--cCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI--QGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l--~~~d~Vi~~ag~  157 (331)
                      .+.+|||+||+|.+|...++.+...  |.+|+++++ +++.+.+.. +... ..|..+.+...++.  .++|+||+++|.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~~-~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVCS-QDASELVRKLGADD-VIDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC-GGGHHHHHHTTCSE-EEETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeC-hHHHHHHHHcCCCE-EEECCchHHHHHHhhcCCCCEEEECCCC
Confidence            3568999999999999999999888  999998884 444443321 2222 23555544333333  379999999984

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.13  E-value=0.0014  Score=57.25  Aligned_cols=71  Identities=20%  Similarity=0.301  Sum_probs=46.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchh-----hhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESK-----QKIGGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~-----~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      +.+|.|.|++|.+|+.+++.+.+.+ +.++++. +|+.+..     .++.. +.  ..++.-.+++.+++.++|+||.+.
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~-~~eLvg~vd~~~~~~~G~d~gel~G-~~--~~gv~v~~dl~~ll~~aDVvIDFT   96 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRK-DVELCAVLVRKGSSFVDKDASILIG-SD--FLGVRITDDPESAFSNTEGILDFS   96 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCS-SEEEEEEBCCTTCTTTTSBGGGGTT-CS--CCSCBCBSCHHHHTTSCSEEEECS
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCCccccccchHHhhc-cC--cCCceeeCCHHHHhcCCCEEEEcC
Confidence            4689999999999999999998763 8887765 5543221     11111 00  122222345677778889888876


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      .
T Consensus        97 ~   97 (288)
T 3ijp_A           97 Q   97 (288)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.12  E-value=0.00078  Score=61.42  Aligned_cols=99  Identities=14%  Similarity=0.024  Sum_probs=60.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe--cCCc--hhhhcC------------CCCcEEEccCCCcccHHH
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV--RTEE--SKQKIG------------GADDLFIGDIRDSNSIIP  143 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~--R~~~--~~~~l~------------~~~~~v~~Dl~d~~~~~~  143 (331)
                      |.+++|.|.||||++|..+++.|.++ |..++..+.  ++..  +.....            ....+...|  +.+    
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~h-p~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~--~~~----   89 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKH-PEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECK--PEG----   89 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTC-SSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESS--SCT----
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcC-CCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCc--hhh----
Confidence            45678999999999999999988776 366776653  3211  111110            012222222  111    


Q ss_pred             HhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC
Q 046297          144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       144 ~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~  217 (331)
                      .++++|+||-+.+.                               .....++..+.+.|+ ++|=.|+..=.++
T Consensus        90 ~~~~~Dvvf~alp~-------------------------------~~s~~~~~~~~~~G~-~VIDlSa~fR~~~  131 (381)
T 3hsk_A           90 NFLECDVVFSGLDA-------------------------------DVAGDIEKSFVEAGL-AVVSNAKNYRREK  131 (381)
T ss_dssp             TGGGCSEEEECCCH-------------------------------HHHHHHHHHHHHTTC-EEEECCSTTTTCT
T ss_pred             hcccCCEEEECCCh-------------------------------hHHHHHHHHHHhCCC-EEEEcCCcccCCC
Confidence            25789999999863                               124667777778887 5666677653333

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.11  E-value=0.0041  Score=56.37  Aligned_cols=92  Identities=24%  Similarity=0.257  Sum_probs=56.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC---eEEEEecCCchhhh--cCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY---AARGLVRTEESKQK--IGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~---~V~~l~R~~~~~~~--l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +++|.|.||||++|..|++.|.++  ++   +++.+.-....-..  +.. .....-++. ++    .++++|+||.+++
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~--~~p~~el~~~as~~saG~~~~~~~-~~~~~~~~~-~~----~~~~~Dvvf~a~~   73 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEES--TLPIDKIRYLASARSAGKSLKFKD-QDITIEETT-ET----AFEGVDIALFSAG   73 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTC--CCCEEEEEEEECTTTTTCEEEETT-EEEEEEECC-TT----TTTTCSEEEECSC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcC--CCCcEEEEEEEccccCCCcceecC-CCceEeeCC-HH----HhcCCCEEEECCC
Confidence            468999999999999999988887  44   45555432211111  111 111112221 12    2578999999987


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      .                               ......+..+.+.|+ ++|=.|+..
T Consensus        74 ~-------------------------------~~s~~~a~~~~~~G~-~vIDlSa~~   98 (366)
T 3pwk_A           74 S-------------------------------STSAKYAPYAVKAGV-VVVDNTSYF   98 (366)
T ss_dssp             H-------------------------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             h-------------------------------HhHHHHHHHHHHCCC-EEEEcCCcc
Confidence            3                               124567777778887 566677764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.10  E-value=0.00081  Score=58.33  Aligned_cols=65  Identities=20%  Similarity=0.097  Sum_probs=49.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .++++|+|+ |..|+.++..|++.  |.+|+++.|+.++.+.+. .......++.+       +.++|+||++...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~--G~~v~V~nRt~~ka~~la-~~~~~~~~~~~-------l~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQ-RLGCDCFMEPP-------KSAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHH-HHTCEEESSCC-------SSCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH-HCCCeEecHHH-------hccCCEEEEcccC
Confidence            689999996 99999999999999  899999999998876654 22222223322       1289999998754

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.09  E-value=0.0003  Score=62.39  Aligned_cols=72  Identities=17%  Similarity=0.072  Sum_probs=49.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEE--------ccCCCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFI--------GDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~--------~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      +|+|.|+|+ |.+|..++..|.+.  |++|++++|++++.+.+.. .+....        .+..+.+++.++++++|+||
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi   79 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLII   79 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEE
Confidence            478999996 99999999999999  9999999998876655432 222211        11112223333445889999


Q ss_pred             Eccc
Q 046297          153 ILTS  156 (331)
Q Consensus       153 ~~ag  156 (331)
                      -+..
T Consensus        80 ~~v~   83 (316)
T 2ew2_A           80 ALTK   83 (316)
T ss_dssp             ECSC
T ss_pred             EEec
Confidence            8874

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=97.09  E-value=0.003  Score=49.35  Aligned_cols=84  Identities=18%  Similarity=0.174  Sum_probs=56.7

Q ss_pred             CCeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      .++|.|+|++   |.+|..+++.|++.  ||+|+.+..+  . +++.        .+.-..++.++.+.+|.++-+..  
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~--G~~v~~Vnp~--~-~~i~--------G~~~y~sl~~l~~~vDlvvi~vp--   86 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPK--Y-EEVL--------GRKCYPSVLDIPDKIEVVDLFVK--   86 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTT--C-SEET--------TEECBSSGGGCSSCCSEEEECSC--
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHC--CCEEEEECCC--C-CeEC--------CeeccCCHHHcCCCCCEEEEEeC--
Confidence            4679999998   89999999999998  9986655433  2 1111        11111223334457899988763  


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                                                   -.....+++.|.+.|++.+++.
T Consensus        87 -----------------------------~~~~~~vv~~~~~~gi~~i~~~  108 (144)
T 2d59_A           87 -----------------------------PKLTMEYVEQAIKKGAKVVWFQ  108 (144)
T ss_dssp             -----------------------------HHHHHHHHHHHHHHTCSEEEEC
T ss_pred             -----------------------------HHHHHHHHHHHHHcCCCEEEEC
Confidence                                         2346778888888999877654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.08  E-value=0.0027  Score=56.04  Aligned_cols=40  Identities=13%  Similarity=0.150  Sum_probs=36.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI  124 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l  124 (331)
                      +++|-++| .|..|..+++.|+++  ||+|++.+|++++.+.+
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l   42 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGL   42 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHH
Confidence            57899999 699999999999999  99999999998877665

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.08  E-value=0.00053  Score=63.36  Aligned_cols=70  Identities=27%  Similarity=0.330  Sum_probs=53.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+++|+|+|+ |.+|+.+++.|...  |. +|++.+|++++..++..  +...  .   +.+++.+.+.++|+||.+.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~--G~~~V~v~~r~~~ra~~la~~~g~~~--~---~~~~l~~~l~~aDvVi~at~  236 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGGEA--V---RFDELVDHLARSDVVVSATA  236 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTCEE--C---CGGGHHHHHHTCSEEEECCS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCCce--e---cHHhHHHHhcCCCEEEEccC
Confidence            45789999997 99999999999999  98 89999999876543322  1221  2   23457778889999999986


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus       237 ~  237 (404)
T 1gpj_A          237 A  237 (404)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.07  E-value=0.0032  Score=54.06  Aligned_cols=97  Identities=14%  Similarity=0.121  Sum_probs=62.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCc-------------------hhh-------hcCCCCcEE--
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEE-------------------SKQ-------KIGGADDLF--  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~-------------------~~~-------~l~~~~~~v--  131 (331)
                      ...+|+|.|+ |.+|+++++.|...  |. ++++++++.-                   +.+       ++.+.+++.  
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~--Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGA--GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHT--TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHc--CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            3578999997 77999999999999  76 6777765431                   111       112223333  


Q ss_pred             EccCCCcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ..++ +.+.+.+.++++|+||.+..                              |...-..+-++|++.++ .+|..+.
T Consensus       104 ~~~~-~~~~~~~~~~~~DvVi~~~d------------------------------~~~~r~~l~~~~~~~~~-p~i~~~~  151 (251)
T 1zud_1          104 QQRL-TGEALKDAVARADVVLDCTD------------------------------NMATRQEINAACVALNT-PLITASA  151 (251)
T ss_dssp             CSCC-CHHHHHHHHHHCSEEEECCS------------------------------SHHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCC------------------------------CHHHHHHHHHHHHHhCC-CEEEEec
Confidence            2333 33557778889999998864                              34444566677788775 4666544


Q ss_pred             C
Q 046297          212 M  212 (331)
Q Consensus       212 ~  212 (331)
                      .
T Consensus       152 ~  152 (251)
T 1zud_1          152 V  152 (251)
T ss_dssp             E
T ss_pred             c
Confidence            3

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=97.07  E-value=0.00044  Score=61.17  Aligned_cols=39  Identities=21%  Similarity=0.123  Sum_probs=34.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK  123 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~  123 (331)
                      +++|.|+|+ |.+|..++..|++.  |++|++++|++++.+.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~   53 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAAT--GHTVVLVDQTEDILAK   53 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHH
Confidence            568999997 99999999999999  9999999999776543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.07  E-value=0.0018  Score=57.10  Aligned_cols=64  Identities=13%  Similarity=0.059  Sum_probs=50.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .++|.|+| .|.+|..+++.|++.  ||+|++.+|++++.+.+.. ++.       -.+++.++++ +|+||.+..
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEAGAT-------LADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHTTCE-------ECSSHHHHTT-SSEEEECCS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCE-------EcCCHHHHHh-CCEEEEECC
Confidence            46899998 599999999999999  9999999999887666533 221       1245667777 999988875

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.07  E-value=0.00082  Score=59.75  Aligned_cols=110  Identities=20%  Similarity=0.080  Sum_probs=65.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcE--EEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDL--FIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~--v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |+|.|+|+ |.+|..++..|.+.+.|++|+++++++++.+.+    ......  ....+....+..+ ++++|+||.+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~   78 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAG   78 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCC
Confidence            57999998 999999999999853379999999998765532    111000  0001111122333 789999999997


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEE
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLV  209 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~  209 (331)
                      .....+.       .++        +....|+...+.+++.+++...+ .++.+
T Consensus        79 ~p~~~g~-------~r~--------dl~~~n~~i~~~i~~~i~~~~~~~~viv~  117 (310)
T 1guz_A           79 LPRKPGM-------TRE--------DLLMKNAGIVKEVTDNIMKHSKNPIIIVV  117 (310)
T ss_dssp             CCCCTTC-------CHH--------HHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred             CCCCCCC-------CHH--------HHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            5221100       000        01134666677888888777543 44444

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.06  E-value=0.00048  Score=62.56  Aligned_cols=73  Identities=12%  Similarity=0.111  Sum_probs=52.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh-cCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI-QGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l-~~~d~Vi~~ag~  157 (331)
                      ...+|||+|| |.+|...++.+...  |++|+++++++++.+.+.. +...+ .|..+..++.+.+ .++|+||+++|.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAM--GAETYVISRSSRKREDAMKMGADHY-IATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEE-EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCCEE-EcCcCchHHHHHhhcCCCEEEECCCC
Confidence            3578999999 99999999999888  9999999998877654322 12222 3554441333333 589999999984

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=97.05  E-value=0.011  Score=51.84  Aligned_cols=88  Identities=23%  Similarity=0.188  Sum_probs=59.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~  158 (331)
                      ..+|+|.|++|.+|+.+++.|++.  |++++... ++.+. ++.        ..+.-..++.++.+  ++|+++.+... 
T Consensus         7 ~~rVaViG~sG~~G~~~~~~l~~~--g~~~V~~V-~p~~~g~~~--------~G~~vy~sl~el~~~~~~D~viI~tP~-   74 (288)
T 2nu8_A            7 NTKVICQGFTGSQGTFHSEQAIAY--GTKMVGGV-TPGKGGTTH--------LGLPVFNTVREAVAATGATASVIYVPA-   74 (288)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEE-CTTCTTCEE--------TTEEEESSHHHHHHHHCCCEEEECCCG-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEe-CCCccccee--------CCeeccCCHHHHhhcCCCCEEEEecCH-
Confidence            468999999999999999999998  88855333 33221 110        11111334666666  89999988753 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                                                    .....+++.|.++|++.+|.+++
T Consensus        75 ------------------------------~~~~~~~~ea~~~Gi~~iVi~t~   97 (288)
T 2nu8_A           75 ------------------------------PFCKDSILEAIDAGIKLIITITE   97 (288)
T ss_dssp             ------------------------------GGHHHHHHHHHHTTCSEEEECCC
T ss_pred             ------------------------------HHHHHHHHHHHHCCCCEEEEECC
Confidence                                          11467888888899977665554

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.05  E-value=0.00084  Score=60.38  Aligned_cols=72  Identities=10%  Similarity=0.159  Sum_probs=51.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh---cCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI---QGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l---~~~d~Vi~~ag  156 (331)
                      ...+|||+|+ |.+|...++.+...  |.+|+++++++++.+.+.. +... ..|..+.+....+.   .++|+||.++|
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~-~i~~~~~~~~~~~~~~~g~~d~vid~~g  241 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARRLGAEV-AVNARDTDPAAWLQKEIGGAHGVLVTAV  241 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCE-EEeCCCcCHHHHHHHhCCCCCEEEEeCC
Confidence            3678999997 88999999999988  9999999998877665432 2222 23555544333222   37899999987

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.04  E-value=0.00026  Score=59.71  Aligned_cols=66  Identities=15%  Similarity=0.163  Sum_probs=49.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhhhcCC--CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ++++|.|+| .|.+|..+++.|.+.  |++|++ .+|++++.+.+..  ++....       +..+.++++|+||.+.-
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~g~~~~~-------~~~~~~~~aDvVilavp   90 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRFGASVKA-------VELKDALQADVVILAVP   90 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHHTTTEEE-------CCHHHHTTSSEEEEESC
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHhCCCccc-------ChHHHHhcCCEEEEeCC
Confidence            357899999 699999999999999  999999 8898887665432  222221       12234688999998863

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.03  E-value=0.0039  Score=54.69  Aligned_cols=95  Identities=13%  Similarity=0.128  Sum_probs=63.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC------------------chhh-------hcCCC--CcEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE------------------ESKQ-------KIGGA--DDLFIG  133 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~------------------~~~~-------~l~~~--~~~v~~  133 (331)
                      ..+|+|+|+ |.+|+.+++.|...  |. ++++++++.                  .|.+       ++.+.  ++.+..
T Consensus        36 ~~~VlVvGa-GGlGs~va~~La~a--GVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           36 TFAVAIVGV-GGVGSVTAEMLTRC--GIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHc--CCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            568999996 99999999999999  75 677777654                  1111       12232  344445


Q ss_pred             cCCCcccHHHHh-----------cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC
Q 046297          134 DIRDSNSIIPAI-----------QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG  202 (331)
Q Consensus       134 Dl~d~~~~~~~l-----------~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~  202 (331)
                      ++.+.+.+.+.+           +++|+||.+..                              |+..-..+-++|.+.+
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D------------------------------n~~~R~~in~~c~~~~  162 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD------------------------------NFEARMTINTACNELG  162 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS------------------------------SHHHHHHHHHHHHHHT
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc------------------------------chhhhhHHHHHHHHhC
Confidence            565545555554           57899998864                              5555566778888888


Q ss_pred             CCeEEEEc
Q 046297          203 AKQIVLVG  210 (331)
Q Consensus       203 vk~~v~~S  210 (331)
                      + .+|+.+
T Consensus       163 ~-Pli~~g  169 (292)
T 3h8v_A          163 Q-TWMESG  169 (292)
T ss_dssp             C-CEEEEE
T ss_pred             C-CEEEee
Confidence            6 455443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.03  E-value=0.00045  Score=54.96  Aligned_cols=65  Identities=15%  Similarity=0.133  Sum_probs=48.7

Q ss_pred             CChhHHHHHHHHHhcCCCCeEEEEecCCchhh-------hc---CCCCcEEEccCCCc--ccHHHHhc------CCCEEE
Q 046297           91 GGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-------KI---GGADDLFIGDIRDS--NSIIPAIQ------GIDALI  152 (331)
Q Consensus        91 tG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-------~l---~~~~~~v~~Dl~d~--~~~~~~l~------~~d~Vi  152 (331)
                      +|.++...++.|.+.  |++|++..|++....       .+   ......+++|++++  +++.++++      +-|++|
T Consensus        25 s~~p~~a~a~~La~~--Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQA--GVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHT--TCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHc--CCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            367899999999999  999999888654321       11   22356678899998  88877664      239999


Q ss_pred             EcccC
Q 046297          153 ILTSA  157 (331)
Q Consensus       153 ~~ag~  157 (331)
                      ||+|.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99985

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.02  E-value=0.0026  Score=55.88  Aligned_cols=107  Identities=12%  Similarity=0.029  Sum_probs=70.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c-------CCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I-------GGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l-------~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      |||.|+|| |+||+.++-.|+.++.-.++.+++.++++.+.    +       .....++..+  |.    +.++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence            68999995 99999999999988333479999987644321    1       1122233221  22    357899999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      |..||.....+.        .       -.+..+.|..-.+.+.+.+.+++-+-++.+=|
T Consensus        74 vitAG~prkpGm--------t-------R~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           74 VVTAGLARKPGM--------T-------RLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSS--------C-------HHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEecCCCCCCCC--------c-------hHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            999997544321        0       11123668888889999999887665555444

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.02  E-value=0.0015  Score=59.52  Aligned_cols=72  Identities=18%  Similarity=0.121  Sum_probs=50.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCC-cccHHHHhc-----CCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRD-SNSIIPAIQ-----GIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d-~~~~~~~l~-----~~d~Vi~  153 (331)
                      ..+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+.. ....+ .|..+ .+++.+.+.     ++|+||+
T Consensus       193 g~~VlV~Ga-G~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid  268 (374)
T 1cdo_A          193 GSTCAVFGL-GAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVLSKMTNGGVDFSLE  268 (374)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHHHHHhCCCCCEEEE
Confidence            568999996 99999999998888  88 79999998877655432 23222 35443 123433332     6999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus       269 ~~g~  272 (374)
T 1cdo_A          269 CVGN  272 (374)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9983

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.02  E-value=0.00084  Score=60.84  Aligned_cols=70  Identities=19%  Similarity=0.226  Sum_probs=51.0

Q ss_pred             CeEEEECCCChhHHHH-HHHH-HhcCCCCe-EEEEecCCc---hhhhcCC-CCcEEEccCCCccc--HHHHhcCCCEEEE
Q 046297           83 STVLVTGAGGRTGQIV-YKKL-KERSEQYA-ARGLVRTEE---SKQKIGG-ADDLFIGDIRDSNS--IIPAIQGIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l-~~~L-l~~~~g~~-V~~l~R~~~---~~~~l~~-~~~~v~~Dl~d~~~--~~~~l~~~d~Vi~  153 (331)
                      .+|||+|| |.+|... ++.+ ...  |.+ |++++++++   +.+.+.. +...+  |..+.+.  +.++-.++|+||+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~gg~Dvvid  248 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYEQMDFIYE  248 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSCCEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCCCCCEEEE
Confidence            78999999 9999999 8887 677  887 999999887   6555432 34444  6654332  3333126899999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus       249 ~~g~  252 (357)
T 2b5w_A          249 ATGF  252 (357)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9983

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.02  E-value=0.00067  Score=61.84  Aligned_cols=73  Identities=15%  Similarity=0.222  Sum_probs=54.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .+.+|||+|+ |.+|...++.+...  |.+|+++++++++.+.+.. +... ..|..+.+.+.++..++|+||+++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADE-VVNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSE-EEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcE-EeccccHHHHHHhhcCCCEEEECCCC
Confidence            3578999998 88999999988888  9999999998877654322 1222 23555555455544689999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.02  E-value=0.00089  Score=61.04  Aligned_cols=72  Identities=17%  Similarity=0.149  Sum_probs=51.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      .+.+|||+|+ |.+|...++.+...  |. +|+++++++++.+.... +... ..|..+.+....+.+       ++|+|
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~i~~~~~~~~gg~Dvv  257 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLA--GATTVILSTRQATKRRLAEEVGATA-TVDPSAGDVVEAIAGPVGLVPGGVDVV  257 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHTCSE-EECTTSSCHHHHHHSTTSSSTTCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHcCCCE-EECCCCcCHHHHHHhhhhccCCCCCEE
Confidence            3678999998 99999999998888  98 88888888776554322 2222 235555543333333       68999


Q ss_pred             EEccc
Q 046297          152 IILTS  156 (331)
Q Consensus       152 i~~ag  156 (331)
                      |.++|
T Consensus       258 id~~G  262 (370)
T 4ej6_A          258 IECAG  262 (370)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99987

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.02  E-value=0.0007  Score=59.38  Aligned_cols=65  Identities=11%  Similarity=0.135  Sum_probs=49.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |+|.|+|. |.+|..+++.|++.  ||+|++.+|++++.+.+...      .+.-.+++.++++++|+||.+..
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~------g~~~~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAAL------GAERAATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT------TCEECSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC------CCeecCCHHHHHhcCCEEEEEcC
Confidence            67999985 99999999999999  99999999998877665332      11112345667777888887764

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.01  E-value=0.0014  Score=57.37  Aligned_cols=68  Identities=19%  Similarity=0.238  Sum_probs=53.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...++++|+|+ |..|+.++..|.+.  |. +|+++.|+.++.+.+...+..+.  +   +++.+ + ++|+||++...
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~--G~~~v~v~nRt~~ka~~La~~~~~~~--~---~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDN--FAKDIYVVTRNPEKTSEIYGEFKVIS--Y---DELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHT--TCSEEEEEESCHHHHHHHCTTSEEEE--H---HHHTT-C-CCSEEEECSST
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHhcCccc--H---HHHHh-c-cCCEEEECCcc
Confidence            34789999997 89999999999999  88 89999999988888776554332  1   23334 4 89999998853

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.01  E-value=0.00052  Score=61.32  Aligned_cols=104  Identities=12%  Similarity=-0.028  Sum_probs=69.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----c------CCCCcEE-EccCCCcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----I------GGADDLF-IGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l------~~~~~~v-~~Dl~d~~~~~~~l~~~  148 (331)
                      .++|.|+|+ |.+|..++..|+..  |.  +|+++++++++.+.    +      .....++ ..|+   +    .++++
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~----~~~da   90 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---S----VSAGS   90 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---C----SCSSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---H----HhCCC
Confidence            578999998 99999999999999  76  89999998754432    1      1112222 2232   2    27899


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCe-EEEEc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQ-IVLVG  210 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~-~v~~S  210 (331)
                      |+||..+|.....+.       .        -.+....|....+.+.+.+.+++-+- ++.+|
T Consensus        91 DiVIitaG~p~kpG~-------t--------R~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           91 KLVVITAGARQQEGE-------S--------RLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             SEEEECCSCCCCSSC-------C--------TTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEeCCCCCCCCC-------C--------HHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            999999997433211       1        11223668888888888888876443 44444

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.01  E-value=0.00032  Score=62.38  Aligned_cols=104  Identities=13%  Similarity=0.019  Sum_probs=67.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----cC-------CCCcEEEccCCCcccHHHHhcCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----IG-------GADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l~-------~~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      |||.|+|+ |.+|..++..|+..  +.  +|+++++++++.+.    +.       ....+...|  +    .++++++|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aD   71 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSD   71 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCC
Confidence            58999997 99999999999998  65  89999998866432    11       123332122  1    24688999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVG  210 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~S  210 (331)
                      +||.++|.....+.        .-       .+....|....+.+.+.+.+++-+ .++.+|
T Consensus        72 vVii~ag~~~kpG~--------~R-------~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           72 VCIITAGLPRSPGM--------SR-------DDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EEEECCCC---------------C-------HHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EEEECCCCCCCCCC--------CH-------HHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            99999986332110        00       111256777788888888887644 344433

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.01  E-value=0.00073  Score=60.93  Aligned_cols=69  Identities=17%  Similarity=0.186  Sum_probs=49.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCccc---HHHHh--cCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNS---IIPAI--QGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~---~~~~l--~~~d~Vi~~a  155 (331)
                      ..+|||+||+|.+|...++.+...  |++|+++ +++++.+.+.. ....  .| .+.+.   +.+..  .++|+||+++
T Consensus       151 g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~lGa~~--i~-~~~~~~~~~~~~~~~~g~D~vid~~  224 (343)
T 3gaz_A          151 GQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRDLGATP--ID-ASREPEDYAAEHTAGQGFDLVYDTL  224 (343)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHHHTSEE--EE-TTSCHHHHHHHHHTTSCEEEEEESS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHHcCCCE--ec-cCCCHHHHHHHHhcCCCceEEEECC
Confidence            578999999999999999999998  9999998 77666554322 2333  34 33322   22222  2699999999


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       225 g  225 (343)
T 3gaz_A          225 G  225 (343)
T ss_dssp             C
T ss_pred             C
Confidence            8

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.00  E-value=0.0016  Score=59.32  Aligned_cols=72  Identities=19%  Similarity=0.145  Sum_probs=50.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCC-cccHHHHhc-----CCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRD-SNSIIPAIQ-----GIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d-~~~~~~~l~-----~~d~Vi~  153 (331)
                      ..+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+.. ....+ .|..+ .+++.+.+.     ++|+||+
T Consensus       192 g~~VlV~Ga-G~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid  267 (374)
T 2jhf_A          192 GSTCAVFGL-GGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEVLTEMSNGGVDFSFE  267 (374)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHHHHHHhCCCCcEEEE
Confidence            568999995 99999999999888  98 79999998877655432 22222 35443 123333332     6999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus       268 ~~g~  271 (374)
T 2jhf_A          268 VIGR  271 (374)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9983

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.99  E-value=0.00098  Score=60.41  Aligned_cols=73  Identities=12%  Similarity=0.060  Sum_probs=54.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-C-CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-G-ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...+|||+|+ |.+|...++.+...  |.+|+++++++++.+.+. . +...+ .|..+.+.+.++..++|+||+++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHHHhcCCCCEEEECCCC
Confidence            4578999996 99999999999888  999999999987765433 2 22222 3455555566655689999999984

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.99  E-value=0.00076  Score=60.88  Aligned_cols=73  Identities=14%  Similarity=0.117  Sum_probs=51.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCC--cccHHHHh-cCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRD--SNSIIPAI-QGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d--~~~~~~~l-~~~d~Vi~~ag  156 (331)
                      .+.+|||+||+|.+|...++.+...  |++|+++++++++.+.+.. +...+ .|..+  .+.+.+.- .++|+|++++|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g  226 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKKMGADIV-LNHKESLLNQFKTQGIELVDYVFCTFN  226 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHHHTCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCcEE-EECCccHHHHHHHhCCCCccEEEECCC
Confidence            3678999999999999999999988  9999999998877654432 12222 23332  11222221 26999999987

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.98  E-value=0.00088  Score=59.77  Aligned_cols=110  Identities=15%  Similarity=0.058  Sum_probs=65.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----cCCCCcEE-EccCCCcccHHHHhcCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----IGGADDLF-IGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l~~~~~~v-~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ++||.|+|+ |.+|..++-.|+..  +.  +|++++.++++.+.    +.+...+. ...+.. ++ .++++++|+||..
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~-~~a~~~aDvVii~   81 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-GD-YSDVKDCDVIVVT   81 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---C-GGGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-CC-HHHhCCCCEEEEc
Confidence            468999998 99999999999998  66  89999998765432    22211100 001111 11 3468999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      +|.....+            ..-   .+....|+...+.+++.+.+..-+-+|.+.|
T Consensus        82 ~g~p~k~g------------~~r---~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           82 AGANRKPG------------ETR---LDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             CCC------------------CH---HHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             CCCCCCCC------------cCH---HHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            98632211            000   0112557777788888888875454444444

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.98  E-value=0.0054  Score=52.32  Aligned_cols=36  Identities=25%  Similarity=0.308  Sum_probs=28.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEE  119 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~  119 (331)
                      .+++|.|+|+ |.+|+.+++.+.++  ++++++ ++|+.+
T Consensus         2 ~MmkI~ViGa-GrMG~~i~~~l~~~--~~eLva~~d~~~~   38 (243)
T 3qy9_A            2 ASMKILLIGY-GAMNQRVARLAEEK--GHEIVGVIENTPK   38 (243)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEECSSCC
T ss_pred             CceEEEEECc-CHHHHHHHHHHHhC--CCEEEEEEecCcc
Confidence            4689999999 99999999999998  447776 566543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.98  E-value=0.0015  Score=57.96  Aligned_cols=102  Identities=18%  Similarity=0.104  Sum_probs=63.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----cCCC------CcEEEccCCCcccHHHHhcCCCE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----IGGA------DDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l~~~------~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      |||.|+|| |.+|..++..|+..  |+  +|+++++++++.+.    +.+.      ..+. .  .+    .++++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~----~~a~~~aDv   70 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GG----HSELADAQV   70 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--EC----GGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CC----HHHhCCCCE
Confidence            57999998 99999999999999  88  99999998764432    1111      1121 1  12    246889999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      ||.+++.....+.       .        -.+....|+...+.+++.+.+...+-++.+
T Consensus        71 VIi~~~~~~~~g~-------~--------r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~  114 (304)
T 2v6b_A           71 VILTAGANQKPGE-------S--------RLDLLEKNADIFRELVPQITRAAPDAVLLV  114 (304)
T ss_dssp             EEECC---------------------------CHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred             EEEcCCCCCCCCC-------c--------HHHHHHhHHHHHHHHHHHHHHhCCCeEEEE
Confidence            9999975322110       0        011124577778888888887754434433

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.97  E-value=0.00089  Score=59.50  Aligned_cols=67  Identities=16%  Similarity=0.066  Sum_probs=51.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+++|.|+| .|.+|..+++.|++.  ||+|++.+|++++.+.+.. ++.       -..+..++++++|+||-+..
T Consensus        19 ~~m~~I~iIG-~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~g~~-------~~~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           19 SHMMEVGFLG-LGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEHGAS-------VCESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHTTCE-------ECSSHHHHHHHCSEEEECCS
T ss_pred             ccCCEEEEEC-ccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCe-------EcCCHHHHHHhCCEEEEEcC
Confidence            3467899998 599999999999999  9999999999887766532 121       12345666777888887764

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.97  E-value=0.0011  Score=58.99  Aligned_cols=106  Identities=18%  Similarity=0.114  Sum_probs=67.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C---C----CCcEEEccCCCcccHHHHhcCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G---G----ADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~---~----~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      ..+||.|+|+ |.+|..++..|+..+...+|+++++++++.+..    .   .    ...+.. |  +    .++++++|
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD   76 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD   76 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence            3578999998 999999999999883234899999987543321    1   1    122221 1  1    24688999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +||.+++.....+.       .+ ..       ....|....+.+++.+.+..-+-++++
T Consensus        77 vViia~~~~~~~g~-------~r-~d-------l~~~n~~i~~~i~~~i~~~~p~a~~iv  121 (316)
T 1ldn_A           77 LVVICAGANQKPGE-------TR-LD-------LVDKNIAIFRSIVESVMASGFQGLFLV  121 (316)
T ss_dssp             EEEECCSCCCCTTT-------CS-GG-------GHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             EEEEcCCCCCCCCC-------CH-HH-------HHHcChHHHHHHHHHHHHHCCCCEEEE
Confidence            99999986332210       00 11       124466667788888887754433333

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.97  E-value=0.00058  Score=59.78  Aligned_cols=69  Identities=25%  Similarity=0.242  Sum_probs=49.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCC----cEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGAD----DLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~----~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ...++++|+|+ |.+|+.++..|++.  |+ +|++..|++++.+++...+    .+...++.+      +.+++|+||++
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------l~~~aDiIIna  194 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQ--QPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------LKQSYDVIINS  194 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTT--CCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------CCSCEEEEEEC
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhc--CCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------hcCCCCEEEEc
Confidence            35789999997 89999999999999  96 9999999987765542211    122222222      12688999998


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      ...
T Consensus       195 Tp~  197 (281)
T 3o8q_A          195 TSA  197 (281)
T ss_dssp             SCC
T ss_pred             CcC
Confidence            764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.97  E-value=0.0012  Score=59.27  Aligned_cols=101  Identities=16%  Similarity=0.110  Sum_probs=65.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhc----CC-------CCcEEEccCCCcccHHHHhcCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKI----GG-------ADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l----~~-------~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      .++|.|+|| |.+|..++..|+..  |+ +|++.++++++.+..    .+       ...+..     ..++ ++++++|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~--g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD   84 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQK--DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-----ENNY-EYLQNSD   84 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-----ESCG-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-----CCCH-HHHCCCC
Confidence            468999998 99999999999999  88 999999998765531    11       111221     1223 5689999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeE
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQI  206 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~  206 (331)
                      +||..+|.....+.       .+.        +....|+...+.+++.+.+..-+-+
T Consensus        85 ~VI~avg~p~k~g~-------tr~--------dl~~~n~~i~~~i~~~i~~~~p~a~  126 (328)
T 2hjr_A           85 VVIITAGVPRKPNM-------TRS--------DLLTVNAKIVGSVAENVGKYCPNAF  126 (328)
T ss_dssp             EEEECCSCCCCTTC-------CSG--------GGHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             EEEEcCCCCCCCCC-------chh--------hHHhhhHHHHHHHHHHHHHHCCCeE
Confidence            99999985322110       001        1123466667778888777654433

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=96.96  E-value=0.015  Score=51.08  Aligned_cols=88  Identities=22%  Similarity=0.218  Sum_probs=59.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~  158 (331)
                      ..+++|.|++|..|+.+++.|++.  |++++ ...++.+. ++.        .++.-..++.++.+  ++|+++.+..  
T Consensus        13 ~~~v~V~Gasg~~G~~~~~~l~~~--g~~~V-~~VnP~~~g~~i--------~G~~vy~sl~el~~~~~~Dv~ii~vp--   79 (294)
T 2yv1_A           13 NTKAIVQGITGRQGSFHTKKMLEC--GTKIV-GGVTPGKGGQNV--------HGVPVFDTVKEAVKETDANASVIFVP--   79 (294)
T ss_dssp             TCCEEEETTTSHHHHHHHHHHHHT--TCCEE-EEECTTCTTCEE--------TTEEEESSHHHHHHHHCCCEEEECCC--
T ss_pred             CCEEEEECCCCCHHHHHHHHHHhC--CCeEE-EEeCCCCCCceE--------CCEeeeCCHHHHhhcCCCCEEEEccC--
Confidence            346888999999999999999998  89844 33334321 111        11111234666666  8999998864  


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                                                   -..+..+++.|.++|++.+|.+++
T Consensus        80 -----------------------------~~~~~~~v~ea~~~Gi~~vVi~t~  103 (294)
T 2yv1_A           80 -----------------------------APFAKDAVFEAIDAGIELIVVITE  103 (294)
T ss_dssp             -----------------------------HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred             -----------------------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence                                         233677888888899986766543

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.96  E-value=0.0026  Score=58.61  Aligned_cols=69  Identities=16%  Similarity=0.277  Sum_probs=55.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      .+++|+|+|+ |.+|+.+++.+.+.  |++|++++ .+.. ...+......+.+|+.|.+.+.++++.+|+|+-
T Consensus        23 ~~~~I~ilGg-G~lg~~l~~aa~~l--G~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           23 NSRKVGVLGG-GQLGRMLVESANRL--NIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            4678999997 89999999999999  99999999 5432 223333345778999999999999999998864

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.95  E-value=0.0047  Score=56.16  Aligned_cols=95  Identities=13%  Similarity=0.128  Sum_probs=56.5

Q ss_pred             CCeEEEECCCChhHHHHHH-HHHhcC-CCCeEEEEecCCc--hhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYK-KLKERS-EQYAARGLVRTEE--SKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~-~Ll~~~-~g~~V~~l~R~~~--~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .++|.|+||||++|+.+++ .|.+++ +..+++.++-+..  +...+.+. ....-|+.+++    .++++|+||.+++.
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~-~~~v~~~~~~~----~~~~vDvvf~a~~~   78 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKN-ETTLKDATSID----DLKKCDVIITCQGG   78 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCS-CCBCEETTCHH----HHHTCSEEEECSCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCC-ceEEEeCCChh----HhcCCCEEEECCCh
Confidence            5789999999999999999 555541 1246666543321  11122221 11111222222    25789999999873


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccC
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSM  212 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~  212 (331)
                                                     .....++..+.+.|+| .+|=.|+.
T Consensus        79 -------------------------------~~s~~~~~~~~~~G~k~~VID~ss~  103 (377)
T 3uw3_A           79 -------------------------------DYTNDVFPKLRAAGWNGYWIDAASS  103 (377)
T ss_dssp             -------------------------------HHHHHHHHHHHHTTCCSEEEECSST
T ss_pred             -------------------------------HHHHHHHHHHHHCCCCEEEEeCCcc
Confidence                                           1256677777788985 56555554

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.95  E-value=0.0017  Score=59.27  Aligned_cols=72  Identities=18%  Similarity=0.078  Sum_probs=50.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCC-cccHHHHh-----cCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRD-SNSIIPAI-----QGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d-~~~~~~~l-----~~~d~Vi~  153 (331)
                      ..+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+.. ....+ .|..+ .+++.+.+     .++|+||+
T Consensus       196 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~Dvvid  271 (376)
T 1e3i_A          196 GSTCAVFGL-GCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVITELTAGGVDYSLD  271 (376)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHHHHHhCCCccEEEE
Confidence            568999996 99999999988888  98 79999998877655432 23322 34443 12333332     26999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus       272 ~~G~  275 (376)
T 1e3i_A          272 CAGT  275 (376)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            9983

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.95  E-value=0.0015  Score=59.29  Aligned_cols=70  Identities=11%  Similarity=0.193  Sum_probs=49.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHh-cCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh-----cCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKE-RSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI-----QGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~-~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~  154 (331)
                      ..+|||+||+|.+|...++.+.. .  |.+|+++++++++.+.+.. +...+ .|..+  ++.+.+     .++|+|+.+
T Consensus       172 g~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~~~~~~~~~~~lGad~v-i~~~~--~~~~~v~~~~~~g~Dvvid~  246 (363)
T 4dvj_A          172 APAILIVGGAGGVGSIAVQIARQRT--DLTVIATASRPETQEWVKSLGAHHV-IDHSK--PLAAEVAALGLGAPAFVFST  246 (363)
T ss_dssp             EEEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECSSHHHHHHHHHTTCSEE-ECTTS--CHHHHHHTTCSCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHcCCCEE-EeCCC--CHHHHHHHhcCCCceEEEEC
Confidence            46799999999999999988776 5  8999999998877655432 22322 34433  233333     268999999


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      +|
T Consensus       247 ~g  248 (363)
T 4dvj_A          247 TH  248 (363)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.95  E-value=0.0017  Score=57.24  Aligned_cols=36  Identities=19%  Similarity=0.335  Sum_probs=32.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      +++|.|+||.|.+|..+++.|.+.  |++|++++|+++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~   56 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDW   56 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCcc
Confidence            468999999999999999999999  999999998764

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.94  E-value=0.0014  Score=58.36  Aligned_cols=63  Identities=14%  Similarity=0.085  Sum_probs=47.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCc-------hhhhcC-CCCcEEEccCCCcc-cHHHHhcCCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEE-------SKQKIG-GADDLFIGDIRDSN-SIIPAIQGIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~-------~~~~l~-~~~~~v~~Dl~d~~-~~~~~l~~~d~V  151 (331)
                      +++|.|+| .|.+|..+++.|++.  | ++|++.+|+++       ..+.+. .++         .. +..++++++|+|
T Consensus        24 ~m~IgvIG-~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---------~~~s~~e~~~~aDvV   91 (317)
T 4ezb_A           24 MTTIAFIG-FGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAELGV---------EPLDDVAGIACADVV   91 (317)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHTTC---------EEESSGGGGGGCSEE
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHCCC---------CCCCHHHHHhcCCEE
Confidence            47899999 599999999999999  9 99999999872       222221 122         22 344567889999


Q ss_pred             EEccc
Q 046297          152 IILTS  156 (331)
Q Consensus       152 i~~ag  156 (331)
                      |-+..
T Consensus        92 i~avp   96 (317)
T 4ezb_A           92 LSLVV   96 (317)
T ss_dssp             EECCC
T ss_pred             EEecC
Confidence            98875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.94  E-value=0.00054  Score=61.16  Aligned_cols=72  Identities=13%  Similarity=0.207  Sum_probs=53.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ...+|||+||+|.+|...++.+...  |.+|+++.+.+ +.+.+.. +... ..|..+.+.+.+.++++|+|+++.|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~~~~-~~~~~~~lGa~~-~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTASKR-NHAFLKALGAEQ-CINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEECHH-HHHHHHHHTCSE-EEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeccc-hHHHHHHcCCCE-EEeCCCcchhhhhccCCCEEEECCC
Confidence            3678999999999999999999988  99999888643 3332211 2222 2466555547777789999999998

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.93  E-value=0.0014  Score=59.70  Aligned_cols=72  Identities=18%  Similarity=0.109  Sum_probs=50.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCC-cccHHHHhc-----CCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRD-SNSIIPAIQ-----GIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d-~~~~~~~l~-----~~d~Vi~  153 (331)
                      ..+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+.. +...+ .|..+ .+++.+.+.     ++|+||+
T Consensus       191 g~~VlV~Ga-G~vG~~avqla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~D~vid  266 (373)
T 2fzw_A          191 GSVCAVFGL-GGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEVLIEMTDGGVDYSFE  266 (373)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHcCCceE-eccccccccHHHHHHHHhCCCCCEEEE
Confidence            568999996 99999999999888  88 79999998877654322 22222 34443 123333332     6999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus       267 ~~g~  270 (373)
T 2fzw_A          267 CIGN  270 (373)
T ss_dssp             CSCC
T ss_pred             CCCc
Confidence            9983

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.92  E-value=0.0042  Score=57.97  Aligned_cols=72  Identities=10%  Similarity=0.160  Sum_probs=54.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC-cEEE-------------ccCCCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFI-------------GDIRDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~-~~v~-------------~Dl~d~~~~~~~l~~~  148 (331)
                      .+|.|+| .|++|..++..|++.  ||+|++.+|++++.+.+..+. .+..             +.+.=..++.++++++
T Consensus         9 ~~~~vIG-lG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~a   85 (446)
T 4a7p_A            9 VRIAMIG-TGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDA   85 (446)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence            4688888 599999999999999  999999999999888775531 1111             1122234567788899


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |+||-+.+.
T Consensus        86 Dvvii~Vpt   94 (446)
T 4a7p_A           86 DAVFIAVGT   94 (446)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEEcCC
Confidence            999999763

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.92  E-value=0.0029  Score=55.71  Aligned_cols=65  Identities=9%  Similarity=0.029  Sum_probs=50.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +++|.|+| .|.+|..+++.|.+.  |++|++++|++++.+.+... +..       .+++.++++++|+||.+..
T Consensus         4 ~~~i~iiG-~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~vi~~vp   69 (301)
T 3cky_A            4 SIKIGFIG-LGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQGAQA-------CENNQKVAAASDIIFTSLP   69 (301)
T ss_dssp             CCEEEEEC-CCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhCCCEEEEECC
Confidence            46899998 599999999999999  99999999998776665432 211       2335566778899998874

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.92  E-value=0.005  Score=55.65  Aligned_cols=72  Identities=13%  Similarity=0.129  Sum_probs=50.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh--------------------------cCCC--CcEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK--------------------------IGGA--DDLF  131 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~--------------------------l~~~--~~~v  131 (331)
                      ...+|+|.|+ |.+|+.+++.|...  |. ++++++++.-....                          +.+.  ++.+
T Consensus       117 ~~~~VlvvG~-GglGs~va~~La~a--Gvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          117 KNAKVVILGC-GGIGNHVSVILATS--GIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHhC--CCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            3678999997 88999999999999  76 67888875321111                          1222  3455


Q ss_pred             EccCCCcccHHHHhcCCCEEEEccc
Q 046297          132 IGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus       132 ~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..++.+..++.+ ++++|+||.+..
T Consensus       194 ~~~i~~~~~~~~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYTDLHK-VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGGGGGG-SCCCSEEEECCC
T ss_pred             ecccCchhhhhH-hccCCEEEEecC
Confidence            556665554666 889999998763

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.92  E-value=0.0012  Score=57.77  Aligned_cols=67  Identities=10%  Similarity=0.096  Sum_probs=52.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC---eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY---AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~---~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ++++|.|+|+ |.+|..+++.|++.  |+   +|++.+|++++.+.+.....+..     ..+..++++++|+||-+.
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~~gi~~-----~~~~~~~~~~aDvVilav   71 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEKCGVHT-----TQDNRQGALNADVVVLAV   71 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHTTCCEE-----ESCHHHHHSSCSEEEECS
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHHcCCEE-----eCChHHHHhcCCeEEEEe
Confidence            4578999997 99999999999999  88   99999999988776644211111     234567788999999887

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.91  E-value=0.008  Score=52.94  Aligned_cols=41  Identities=20%  Similarity=0.196  Sum_probs=30.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG  126 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~  126 (331)
                      +||-++| .|..|..+++.|+++  ||+|++.+|++++.+.+..
T Consensus         6 ~kIgfIG-LG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~   46 (297)
T 4gbj_A            6 EKIAFLG-LGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTK   46 (297)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEC-------CTTTT
T ss_pred             CcEEEEe-cHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH
Confidence            5799998 699999999999999  9999999999888766543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.91  E-value=0.0014  Score=58.34  Aligned_cols=102  Identities=12%  Similarity=0.132  Sum_probs=66.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhh----cC------CCCcEEEccCCCcccHHHHhcCCCE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQK----IG------GADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~----l~------~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      +||.|+|| |.+|..++..|+..  +.  +++++++++++.+.    +.      ..+.+. .|  +    .++++++|+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~----~~a~~~aDv   75 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E----YSDCKDADL   75 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C----GGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C----HHHhCCCCE
Confidence            68999998 99999999999998  55  89999998765442    11      122222 22  1    356899999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      ||..+|.....+.       .        -.+....|+...+.+++.+++.+.+-++.+
T Consensus        76 Vii~ag~~~~~g~-------~--------R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  119 (318)
T 1ez4_A           76 VVITAGAPQKPGE-------S--------RLDLVNKNLNILSSIVKPVVDSGFDGIFLV  119 (318)
T ss_dssp             EEECCCC-------------------------CHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             EEECCCCCCCCCC-------C--------HHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            9999986332110       0        011225677888889998888865433333

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.91  E-value=0.00063  Score=59.69  Aligned_cols=65  Identities=14%  Similarity=0.069  Sum_probs=49.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +++|.|+| .|.+|..+++.|++.  ||+|++.+|++++.+.+.. ++.       -.++..++++++|+||.+..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVALGAR-------QASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHHTCE-------ECSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCe-------ecCCHHHHHHcCCEEEEEcC
Confidence            35799998 699999999999999  9999999999887665432 121       12345666777888888765

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.00084  Score=60.01  Aligned_cols=71  Identities=23%  Similarity=0.202  Sum_probs=48.3

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcc--cHHHHh-cCCCEEEEcccC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSN--SIIPAI-QGIDALIILTSA  157 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~--~~~~~l-~~~d~Vi~~ag~  157 (331)
                      +|||+||+|.+|...++.+...  |++|+++++++++.+.+.. +...+ .|..+.+  .+.++- .++|+||+++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCcH
Confidence            7999999999999999999888  9999999998776554422 22222 3444431  122221 268999999983

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.90  E-value=0.00085  Score=63.00  Aligned_cols=72  Identities=15%  Similarity=0.108  Sum_probs=51.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCc--------------------cc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDS--------------------NS  140 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~--------------------~~  140 (331)
                      +.+|||+||+|.+|...++.+...  |.+|+++++++++.+.+.. +...+ .|..+.                    +.
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~~~~  305 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRAMGAEAI-IDRNAEGYRFWKDENTQDPKEWKRFGKR  305 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCCEE-EETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCcEE-EecCcCcccccccccccchHHHHHHHHH
Confidence            568999999999999999999988  9999999998877655432 12221 233221                    33


Q ss_pred             HHHHhc--CCCEEEEccc
Q 046297          141 IIPAIQ--GIDALIILTS  156 (331)
Q Consensus       141 ~~~~l~--~~d~Vi~~ag  156 (331)
                      +.++..  ++|+||+++|
T Consensus       306 i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          306 IRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHTSCCEEEEEECSC
T ss_pred             HHHHhCCCCCcEEEEcCC
Confidence            344332  7999999998

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.89  E-value=0.0029  Score=58.35  Aligned_cols=72  Identities=17%  Similarity=0.129  Sum_probs=50.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcccH---HHHhc--CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSNSI---IPAIQ--GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~---~~~l~--~~d~Vi~~  154 (331)
                      +.+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+.. +...+ .|..+.+..   .++..  ++|+||.+
T Consensus       214 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~t~g~g~D~vid~  289 (404)
T 3ip1_A          214 GDNVVILGG-GPIGLAAVAILKHA--GASKVILSEPSEVRRNLAKELGADHV-IDPTKENFVEAVLDYTNGLGAKLFLEA  289 (404)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHcCCCEE-EcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence            568999998 99999999999888  98 89999988877654322 22222 355444422   23222  69999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      +|.
T Consensus       290 ~g~  292 (404)
T 3ip1_A          290 TGV  292 (404)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            984

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.89  E-value=0.0011  Score=59.02  Aligned_cols=101  Identities=14%  Similarity=0.059  Sum_probs=64.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcC-----------CCCcEEEccCCCcccHHHHhcCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIG-----------GADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~-----------~~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      .++|.|+|+ |.+|..++..|+++  |+ +|+++++++++.+...           ....+..     ..++ ++++++|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~--g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~a~~~aD   74 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKD--NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-----TDDY-ADISGSD   74 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-----ESCG-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCC
Confidence            468999998 99999999999999  88 9999999986654320           0111211     1223 4678999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeE
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQI  206 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~  206 (331)
                      +||.++|.....+.            ..   .+....|....+.+++.+.+..-+.+
T Consensus        75 iVi~avg~p~~~g~------------~r---~d~~~~~~~i~~~i~~~i~~~~~~~i  116 (317)
T 2ewd_A           75 VVIITASIPGRPKD------------DR---SELLFGNARILDSVAEGVKKYCPNAF  116 (317)
T ss_dssp             EEEECCCCSSCCSS------------CG---GGGHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             EEEEeCCCCCCCCC------------cH---HHHHHhhHHHHHHHHHHHHHHCCCcE
Confidence            99999986332111            00   00112355556777777776643433

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.89  E-value=0.0013  Score=56.28  Aligned_cols=70  Identities=11%  Similarity=0.057  Sum_probs=50.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--------------hhhcCCCCcEEEccCCCcccHHHH
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--------------KQKIGGADDLFIGDIRDSNSIIPA  144 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--------------~~~l~~~~~~v~~Dl~d~~~~~~~  144 (331)
                      +...++|.|+| .|.+|..+++.|++.  |++|++.+|++++              ...+.....     .....+..++
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~   87 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHP-----HVHLAAFADV   87 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC-------CCHHHHGGGST-----TCEEEEHHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcC-----ceeccCHHHH
Confidence            34578899997 699999999999999  9999999999876              222211110     1113456677


Q ss_pred             hcCCCEEEEccc
Q 046297          145 IQGIDALIILTS  156 (331)
Q Consensus       145 l~~~d~Vi~~ag  156 (331)
                      ++++|+||.+..
T Consensus        88 ~~~aDvVilavp   99 (245)
T 3dtt_A           88 AAGAELVVNATE   99 (245)
T ss_dssp             HHHCSEEEECSC
T ss_pred             HhcCCEEEEccC
Confidence            889999998875

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.88  E-value=0.0063  Score=55.16  Aligned_cols=94  Identities=18%  Similarity=0.188  Sum_probs=55.3

Q ss_pred             CeEEEECCCChhHHHHHH-HHHhcC-CCCeEEEEecCCch--hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           83 STVLVTGAGGRTGQIVYK-KLKERS-EQYAARGLVRTEES--KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~-~Ll~~~-~g~~V~~l~R~~~~--~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      ++|.|+||||++|+.+++ .|.+++ +..+++.++-+...  ...+.+. ....-|..++   . .++++|+||.+++. 
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~-~~~~~~~~~~---~-~~~~~Dvvf~a~~~-   74 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKD-AGMLHDAFDI---E-SLKQLDAVITCQGG-   74 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSC-CCBCEETTCH---H-HHTTCSEEEECSCH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCC-ceEEEecCCh---h-HhccCCEEEECCCh-
Confidence            479999999999999999 555551 12466655433211  1112221 1111122222   2 35799999999873 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSM  212 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~  212 (331)
                                                    .....++..+.+.|+| .+|=.|+.
T Consensus        75 ------------------------------~~s~~~~~~~~~~G~k~~VID~ss~   99 (370)
T 3pzr_A           75 ------------------------------SYTEKVYPALRQAGWKGYWIDAAST   99 (370)
T ss_dssp             ------------------------------HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             ------------------------------HHHHHHHHHHHHCCCCEEEEeCCch
Confidence                                          1246677777788885 55555554

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.88  E-value=0.0027  Score=58.84  Aligned_cols=71  Identities=14%  Similarity=0.089  Sum_probs=51.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCC-cEEE-----------ccCCCcccHHHHhcCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFI-----------GDIRDSNSIIPAIQGID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~-~~v~-----------~Dl~d~~~~~~~l~~~d  149 (331)
                      .|+|.|+| .|++|..++..|. +  |++|++++|++++.+.+..+. .+..           ..+.-..++.++++++|
T Consensus        36 ~mkIaVIG-lG~mG~~lA~~La-~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD  111 (432)
T 3pid_A           36 FMKITISG-TGYVGLSNGVLIA-Q--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD  111 (432)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHH-c--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence            57899998 4999999999765 5  899999999998877664421 1110           11222345667888999


Q ss_pred             EEEEccc
Q 046297          150 ALIILTS  156 (331)
Q Consensus       150 ~Vi~~ag  156 (331)
                      +||-+..
T Consensus       112 vViiaVP  118 (432)
T 3pid_A          112 YVIIATP  118 (432)
T ss_dssp             EEEECCC
T ss_pred             EEEEeCC
Confidence            9998864

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.88  E-value=0.0022  Score=57.09  Aligned_cols=68  Identities=22%  Similarity=0.171  Sum_probs=50.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhcCC-CC-cEEEccCCCcccHHH-HhcCCCEEEEc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQKIGG-AD-DLFIGDIRDSNSIIP-AIQGIDALIIL  154 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l~~-~~-~~v~~Dl~d~~~~~~-~l~~~d~Vi~~  154 (331)
                      +..++|.|+| .|.+|..+++.|.+.  |+  +|++.+|++++.+.+.. ++ .....      ++.+ +++++|+||.+
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~------~~~~~~~~~aDvVila  101 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTT------SIAKVEDFSPDFVMLS  101 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEES------CTTGGGGGCCSEEEEC
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHCCCcchhcC------CHHHHhhccCCEEEEe
Confidence            3457899999 699999999999999  98  99999999876654322 11 11112      2335 67899999988


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      ..
T Consensus       102 vp  103 (314)
T 3ggo_A          102 SP  103 (314)
T ss_dssp             SC
T ss_pred             CC
Confidence            74

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.87  E-value=0.002  Score=58.68  Aligned_cols=72  Identities=19%  Similarity=0.126  Sum_probs=50.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCC-cccHHHHh-----cCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRD-SNSIIPAI-----QGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d-~~~~~~~l-----~~~d~Vi~  153 (331)
                      ..+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+.. +...+ .|..+ .+++.+.+     .++|+||.
T Consensus       192 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~t~gg~Dvvid  267 (373)
T 1p0f_A          192 GSTCAVFGL-GGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVICEKTNGGVDYAVE  267 (373)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHHcCCcEE-EecccccchHHHHHHHHhCCCCCEEEE
Confidence            568999996 99999999998888  88 79999998877655432 22222 34443 12233332     26999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus       268 ~~g~  271 (373)
T 1p0f_A          268 CAGR  271 (373)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9983

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.86  E-value=0.0044  Score=56.17  Aligned_cols=74  Identities=15%  Similarity=-0.045  Sum_probs=51.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHh------cCCCE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAI------QGIDA  150 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l------~~~d~  150 (331)
                      .+.+|||+|+ |.+|...++.+...  |.+ |+++++++++.+.+.   ..+.....|-.+.+++.+.+      .++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAA--GACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHT--TCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            3678999998 99999999988888  987 899998887655432   22222333333334444333      26999


Q ss_pred             EEEcccC
Q 046297          151 LIILTSA  157 (331)
Q Consensus       151 Vi~~ag~  157 (331)
                      ||.++|.
T Consensus       256 vid~~g~  262 (363)
T 3m6i_A          256 ALECTGV  262 (363)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999983

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.86  E-value=0.0035  Score=58.19  Aligned_cols=73  Identities=14%  Similarity=0.117  Sum_probs=54.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccC-------------CCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDI-------------RDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl-------------~d~~~~~~~l~~  147 (331)
                      +.+|.|+| .|++|--++..|.+.  ||+|++++.++++.+.+..+ ..+.+-++             +=..+..++++.
T Consensus        21 m~~IaViG-lGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~   97 (444)
T 3vtf_A           21 MASLSVLG-LGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAA   97 (444)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHT
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhc
Confidence            56799997 699999999999999  99999999999988877543 22222211             112345566778


Q ss_pred             CCEEEEcccC
Q 046297          148 IDALIILTSA  157 (331)
Q Consensus       148 ~d~Vi~~ag~  157 (331)
                      +|++|.+.+-
T Consensus        98 ad~~~I~VpT  107 (444)
T 3vtf_A           98 TDATFIAVGT  107 (444)
T ss_dssp             SSEEEECCCC
T ss_pred             CCceEEEecC
Confidence            9999998864

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.86  E-value=0.0025  Score=58.17  Aligned_cols=68  Identities=16%  Similarity=0.239  Sum_probs=54.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh-hcCCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ-KIGGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      .+++|+|+|+ |.+|+.+++.+.+.  |++|++++.++.... .+  .-.++..|+.|.+.+.++++.+|+|..
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~l--G~~viv~d~~~~~p~~~~--ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKM--GYKVVVLDPSEDCPCRYV--AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCTTCTTGGG--SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEECCCCChhhhh--CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            3678999996 89999999999999  999999988654321 12  135778999999999999989998743

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.85  E-value=0.002  Score=58.24  Aligned_cols=73  Identities=21%  Similarity=0.110  Sum_probs=50.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCC--C-cccHHHH---h-cCCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIR--D-SNSIIPA---I-QGIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~--d-~~~~~~~---l-~~~d~V  151 (331)
                      .+.+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+.. +... ..|..  | .+...++   . .++|+|
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~i~~~~~~g~D~v  246 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIGADL-VLQISKESPQEIARKVEGQLGCKPEVT  246 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCSE-EEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhCCCE-EEcCcccccchHHHHHHHHhCCCCCEE
Confidence            3578999996 99999999988888  88 89999998876554322 2222 23444  2 2222222   2 379999


Q ss_pred             EEcccC
Q 046297          152 IILTSA  157 (331)
Q Consensus       152 i~~ag~  157 (331)
                      |+++|.
T Consensus       247 id~~g~  252 (356)
T 1pl8_A          247 IECTGA  252 (356)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999983

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=96.85  E-value=0.0028  Score=49.62  Aligned_cols=84  Identities=18%  Similarity=0.179  Sum_probs=55.9

Q ss_pred             CCeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCC--chhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTE--ESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~--~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .++|.|+|++   |.+|..+++.|++.  ||+|+.+.++.  ++..    ++. +..++      .++.+.+|+++-+..
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~--G~~v~~vnp~~~g~~i~----G~~-~~~sl------~el~~~~Dlvii~vp   79 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQ--GYHVIPVSPKVAGKTLL----GQQ-GYATL------ADVPEKVDMVDVFRN   79 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHH--TCCEEEECSSSTTSEET----TEE-CCSST------TTCSSCCSEEECCSC
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHC--CCEEEEeCCcccccccC----Cee-ccCCH------HHcCCCCCEEEEEeC
Confidence            4579999998   88999999999999  99977776654  2211    111 11122      233357899988764


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      .                               .....+++.+.+.|++.++..
T Consensus        80 ~-------------------------------~~v~~v~~~~~~~g~~~i~i~  101 (145)
T 2duw_A           80 S-------------------------------EAAWGVAQEAIAIGAKTLWLQ  101 (145)
T ss_dssp             S-------------------------------THHHHHHHHHHHHTCCEEECC
T ss_pred             H-------------------------------HHHHHHHHHHHHcCCCEEEEc
Confidence            2                               114566777777899887654

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.85  E-value=0.0028  Score=56.82  Aligned_cols=89  Identities=17%  Similarity=0.174  Sum_probs=53.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEE---EEecCCchhhh--cCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAAR---GLVRTEESKQK--IGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~---~l~R~~~~~~~--l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ++|.|.||+|.+|+.+++.|.++  ++.+.   .+......-..  +.. .+.+.  +. +++.    + ++|+||.+.|
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~--~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~--~~-~~~~----~-~~DvV~~a~g   70 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEAR--NFPLSELRLYASPRSAGVRLAFRGEEIPVE--PL-PEGP----L-PVDLVLASAG   70 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHT--TCCCSCCEEEECGGGSSCEEEETTEEEEEE--EC-CSSC----C-CCSEEEECSH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC--CCCcEEEEEeeccccCCCEEEEcCceEEEE--eC-Chhh----c-CCCEEEECCC
Confidence            47999999999999999999976  55433   22211100011  111 12222  22 2332    3 8999999987


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                      .                               ......+....+.|+ ++|-.|+..
T Consensus        71 ~-------------------------------~~s~~~a~~~~~~G~-~vId~s~~~   95 (331)
T 2yv3_A           71 G-------------------------------GISRAKALVWAEGGA-LVVDNSSAW   95 (331)
T ss_dssp             H-------------------------------HHHHHHHHHHHHTTC-EEEECSSSS
T ss_pred             c-------------------------------cchHHHHHHHHHCCC-EEEECCCcc
Confidence            3                               224566667777887 566677764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	331
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	1e-44
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-17
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-07
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-07
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	8e-07
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-05
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	5e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-04
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-04
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	5e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	7e-04
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	8e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.001
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.001
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	0.001
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.003

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  151 bits (381), Expect = 1e-44
 Identities = 202/249 (81%), Positives = 222/249 (89%)

Query: 83  STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSII 142
            TVLVTGA GRTGQIVYKKLKE S+++ A+GLVR+ + K+KIGG  D+FIGDI D++SI 
Sbjct: 4   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSIN 63

Query: 143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG 202
           PA QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAAK AG
Sbjct: 64  PAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG 123

Query: 203 AKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGI 262
            K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DKEGG+
Sbjct: 124 VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV 183

Query: 263 RELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKA 322
           RELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTKDFKA
Sbjct: 184 RELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKA 243

Query: 323 LFSQITTRF 331
           LFSQ+T+RF
Sbjct: 244 LFSQVTSRF 252

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.4 bits (189), Expect = 2e-17
 Identities = 38/229 (16%), Positives = 75/229 (32%), Gaps = 28/229 (12%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDS 138
           MA   + + GA G+TG     +  +    Y    LVR        G     + +GD+  +
Sbjct: 1   MAVKKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58

Query: 139 NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA 198
             +   + G DA+I+L      + P                          G +N + A 
Sbjct: 59  ADVDKTVAGQDAVIVLLGTRNDLSPTTV--------------------MSEGARNIVAAM 98

Query: 199 KAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDK 258
           KA G  ++V   S      +          +     +  + L +SG+ Y  +    + D+
Sbjct: 99  KAHGVDKVVACTS-AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQ 157

Query: 259 EGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLA 307
                  +           +R I++ D+    ++ L  +E    +   +
Sbjct: 158 PLTGAYTVTLDGR----GPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS 202

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 50.2 bits (118), Expect = 1e-07
 Identities = 38/258 (14%), Positives = 71/258 (27%), Gaps = 28/258 (10%)

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSI 141
           KS VL+ G  G  G+ +          +    L R E           L+   +      
Sbjct: 3   KSRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLG----- 55

Query: 142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA 201
                       L  A          A                    + Q   ++A K A
Sbjct: 56  ----------AKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEA 105

Query: 202 GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIR----AGGLQD 257
           G  +  L    G                 + KRK  + +  + IPYT +     AG    
Sbjct: 106 GNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAG 165

Query: 258 KEGGIRELLVGKDDELLQTETRT-----IARADVAEVCIQALQFEEAKFKAFDLASKPEG 312
               +   ++   D++L           +   DV    I+++   +   K   +   P  
Sbjct: 166 SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIR--PPM 223

Query: 313 TGTPTKDFKALFSQITTR 330
                K+   ++ +++ +
Sbjct: 224 NILSQKEVIQIWERLSEQ 241

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 49.6 bits (117), Expect = 2e-07
 Identities = 46/268 (17%), Positives = 76/268 (28%), Gaps = 53/268 (19%)

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD----DLFIGDIRD 137
           K T+ V GA GR G  + +        +  R  V + +              LF G + +
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLN 60

Query: 138 SNSII-PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID 196
           +  ++    +G     I T++                             +    K+  D
Sbjct: 61  NVPLMDTLFEGAHLAFINTTSQAGD-------------------------EIAIGKDLAD 95

Query: 197 AAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGG-- 254
           AAK AG  Q  +  SM   +L  P        +   K   E Y+   G+P T + AG   
Sbjct: 96  AAKRAGTIQHYIYSSMPDHSLYGPWP---AVPMWAPKFTVENYVRQLGLPSTFVYAGIYN 152

Query: 255 -------LQDKEGGIRELLVGKDDELLQTETR---TIARADVAEVCIQALQFEEAKF--K 302
                      +  +      +       +       A  DV    +Q  +    K+   
Sbjct: 153 NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGH 212

Query: 303 AFDLASKPEGTGTPTKDFKALFSQITTR 330
              L               A FS+   R
Sbjct: 213 RIALT----FETLSPVQVCAAFSRALNR 236

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 8e-07
 Identities = 40/248 (16%), Positives = 82/248 (33%), Gaps = 45/248 (18%)

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-IGGADDLFIGDIRDSNS 140
           +  +L+TG  G  G  +  KL      +    +      +++ +         ++ + + 
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDG--HEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 58

Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
           + P    +D +  L             A    P  Y        + + IG  N +  AK 
Sbjct: 59  VEPLYIEVDQIYHL-------------ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKR 105

Query: 201 AGAKQIVLVGS--MGGTNLNHPL--NSLGNGNIL-------VWKRKAEQ----YLADSGI 245
            GA+ ++L  +  + G    HP   +  G+ N +         KR AE     Y+   G+
Sbjct: 106 VGAR-LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV 164

Query: 246 PYTIIR----AGGLQDKEGG------IRELLVGKDDELLQTETRT---IARADVAEVCIQ 292
              + R     G       G      I + L G+   +  + ++T      +D+    + 
Sbjct: 165 EVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA 224

Query: 293 ALQFEEAK 300
            +    + 
Sbjct: 225 LMNSNVSS 232

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 42.9 bits (100), Expect = 3e-05
 Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 38/193 (19%)

Query: 84  TVLVTGAGGRTGQIVYKKLKE----------RSEQYAARGLVRTEESKQKIGGADDLFIG 133
             L+TG  G+ G  + + L E          R+  +    +    +          L  G
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 134 DIRDSNSIIPAIQGIDALIILTSAVPKMKPD--FDPAKGGRPEFYFEEGAYPEQVDWIGQ 191
           D+ D++++   ++             +++PD  ++          FE   Y   VD +G 
Sbjct: 63  DLSDTSNLTRILR-------------EVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGT 109

Query: 192 KNQIDAAKAAGAKQ---IVLVGSMG--GTNLNHPLNSLGNGNIL----VWKRKAEQYLAD 242
              ++A +  G ++        +    G     P              V K  A     +
Sbjct: 110 LRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVN 169

Query: 243 ----SGIPYTIIR 251
                G+      
Sbjct: 170 YRESYGMYACNGI 182

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 42.2 bits (98), Expect = 5e-05
 Identities = 25/188 (13%), Positives = 51/188 (27%), Gaps = 44/188 (23%)

Query: 81  AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNS 140
           AK  V + G  G  G  + ++L++R +                          ++ DS +
Sbjct: 1   AKQRVFIAGHRGMVGSAIRRQLEQRGD---------------VELVLRTRDELNLLDSRA 45

Query: 141 IIPAIQG--IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA 198
           +        ID + +  + V           GG          +    + + + N I AA
Sbjct: 46  VHDFFASERIDQVYLAAAKV-----------GGIVANNTYPADF-IYQNMMIESNIIHAA 93

Query: 199 KAAGAKQIVLVGSMG--GTNLNHPLNSLGNGNILVW---------KRKAEQYLAD----S 243
                 +++ +GS          P+         +          K    +         
Sbjct: 94  HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 153

Query: 244 GIPYTIIR 251
           G  Y  + 
Sbjct: 154 GRDYRSVM 161

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.8 bits (91), Expect = 3e-04
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 11/68 (16%)

Query: 83  STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIG 133
           S VLVTGA G     V ++L E    Y  RG  R+      +         G  +   + 
Sbjct: 12  SLVLVTGANGFVASHVVEQLLEHG--YKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 134 DIRDSNSI 141
           D+    + 
Sbjct: 70  DMLKQGAY 77

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 39.4 bits (91), Expect = 3e-04
 Identities = 41/247 (16%), Positives = 70/247 (28%), Gaps = 45/247 (18%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLV-----------RTEESKQKIGGADDLFIG 133
           +LVTG  G  G    ++L   +        V           R   +            G
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 134 DIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN 193
           DIRD+  +   ++G+DA++               A     +      +   + +  G + 
Sbjct: 63  DIRDAGLLARELRGVDAIVHF-------------AAESHVDRSIAGASVFTETNVQGTQT 109

Query: 194 QIDAAKAAGAKQIVLV--GSMGGTNLNHPLN---SLGNGNILVW-KRKAEQ----YLADS 243
            +  A  AG  ++V V    + G+  +        L   +     K  ++     Y    
Sbjct: 110 LLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY 169

Query: 244 GIPYTIIRA----GGLQDKEGG----IRELLVGKDDELLQTETRT---IARADVAEVCIQ 292
           G+   I R     G  Q  E      +  LL G    L          +   D       
Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL 229

Query: 293 ALQFEEA 299
            L    A
Sbjct: 230 VLAGGRA 236

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 38.8 bits (88), Expect = 5e-04
 Identities = 13/106 (12%), Positives = 30/106 (28%), Gaps = 15/106 (14%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           +L+ G  G+ G  + + L       A             +      F GD  +   +   
Sbjct: 3   ILLFGKTGQVGWELQRSLAPVGNLIA-------------LDVHSKEFCGDFSNPKGVAET 49

Query: 145 IQGI--DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
           ++ +  D ++   +     K + +P           E       + 
Sbjct: 50  VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET 95

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 38.6 bits (88), Expect = 7e-04
 Identities = 38/258 (14%), Positives = 65/258 (25%), Gaps = 31/258 (12%)

Query: 81  AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNS 140
           ++S +L+ GA G  G+ V K   +    +    LVR   +      A  L          
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLL---------- 49

Query: 141 IIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA 200
              + +   A I+  S                 +      +    +    Q N I A K 
Sbjct: 50  --ESFKASGANIVHGSIDDHASLVE------AVKNVDVVISTVGSLQIESQVNIIKAIKE 101

Query: 201 AGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEG 260
            G  +       G    N            V  +      A+ GIPYT + +        
Sbjct: 102 VGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAE-GIPYTYVSSNCFAGYFL 160

Query: 261 GIRELLVGKDDEL--------LQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEG 312
                                       +   D+    I+A+       K   L      
Sbjct: 161 RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPAN- 219

Query: 313 TGTPTKDFKALFSQITTR 330
                 +  AL+ +   +
Sbjct: 220 -TLSLNELVALWEKKIDK 236

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.9 bits (87), Expect = 8e-04
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 13/101 (12%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQY----AARGLVRTEESKQKIGGADDLFIGDI 135
           M+  +V+VTGA    G  + ++L +          AR + +  E K        +    +
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV 60

Query: 136 RDSNSIIPAIQ---------GIDALIILTSAVPKMKPDFDP 167
               S+   +          G+  LI     +     + +P
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEP 101

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.4 bits (88), Expect = 8e-04
 Identities = 31/194 (15%), Positives = 55/194 (28%), Gaps = 16/194 (8%)

Query: 70  SKTEAVKV-LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGAD 128
           S+ E ++  L       L+TG  G  G  + + L +        GL       Q+     
Sbjct: 3   SRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLD--QKVVGLDNFATGHQRNLDEV 60

Query: 129 DLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
              + + + SN        I  L    +A   +      A  G       +       + 
Sbjct: 61  RSLVSEKQWSNFKFIQGD-IRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNI 119

Query: 189 IGQKNQIDAAKAAGAKQIVLVGSMGG-----------TNLNHPLNSLGNGNILVWKRKAE 237
            G  N + AA+ A  +      S                +  PL+        V +  A+
Sbjct: 120 DGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTK-YVNELYAD 178

Query: 238 QYLADSGIPYTIIR 251
            +    G     +R
Sbjct: 179 VFSRCYGFSTIGLR 192

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 0.001
 Identities = 34/212 (16%), Positives = 61/212 (28%), Gaps = 43/212 (20%)

Query: 82  KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-------------TEESKQKIGGAD 128
           ++  L+TG  G+ G  + + L E+   Y   G+VR              +  +  I G  
Sbjct: 1   RNVALITGITGQDGSYLAEFLLEKG--YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNM 58

Query: 129 DLFIGDIRDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDW 188
            L  GD+ DS  ++  I  +    I                    +  F+   Y   VD 
Sbjct: 59  KLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSH-----------VKISFDLAEYTADVDG 107

Query: 189 IGQKNQIDAAKAAG---AKQIVLVGS--MGGTNLNHPLN---SLGNGNILVW-KRKAEQY 239
           +G    +DA K  G   + +     +  + G     P          +     K  A   
Sbjct: 108 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWI 167

Query: 240 LAD----SGIPYTIIR----AGGLQDKEGGIR 263
           + +      +              +      R
Sbjct: 168 VVNFREAYNLFAVNGILFNHESPRRGANFVTR 199

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.0 bits (87), Expect = 0.001
 Identities = 27/172 (15%), Positives = 52/172 (30%), Gaps = 6/172 (3%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPA 144
           + +TGAGG     + ++LK       A    + E   + +   D+  + D+R   + +  
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFC-DEFHLVDLRVMENCLKV 76

Query: 145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK 204
            +G+D +  L + +  M                      E     G K    A+ A    
Sbjct: 77  TEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 136

Query: 205 QIVLVGSMGGTNLNHPLNSLGNGNILVW-KRKAEQYLAD----SGIPYTIIR 251
           +   + +   +            +     K   E+         GI   I R
Sbjct: 137 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGR 188

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 80  MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE 119
           M   +V + GA G TG+++ K++ E+        + R + 
Sbjct: 12  MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 51

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (83), Expect = 0.003
 Identities = 35/189 (18%), Positives = 57/189 (30%), Gaps = 37/189 (19%)

Query: 85  VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-------QKIGGADDLFI-GDIR 136
           VLVTG  G  G     +L +    +    L     SK       +++GG    F+ GDIR
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNG--HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 137 DSNSI--IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQ 194
           +   +  I     ID +I               A         ++       +  G    
Sbjct: 61  NEALMTEILHDHAIDTVIHF-------------AGLKAVGESVQKPLEYYDNNVNGTLRL 107

Query: 195 IDAAKAAGAKQIVLVGSMG------------GTNLNHPLNSLGNGNILVWKRKAEQYLAD 242
           I A +AA  K  +   S                    P +  G   ++V +   +   A 
Sbjct: 108 ISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ 167

Query: 243 SGIPYTIIR 251
                 ++R
Sbjct: 168 PDWSIALLR 176

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	331
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.97
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.97
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.97
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.96
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.96
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.96
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.95
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.94
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.94
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.93
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.93
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.92
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.9
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.89
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.87
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.87
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.87
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.87
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.86
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.86
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.86
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.86
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.86
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.86
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.85
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.85
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.85
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.85
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.85
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.84
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.84
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.84
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.84
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.84
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.84
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.84
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.84
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.84
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.83
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.83
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.83
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.82
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.82
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.82
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.82
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.82
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.81
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.81
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.8
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.8
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.8
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.8
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.8
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.79
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.79
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.79
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.78
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.78
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.78
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.78
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.77
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.75
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.74
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.74
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.7
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.69
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.68
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.68
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.67
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.66
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.65
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.62
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.62
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.58
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.57
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.53
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.51
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.3
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.85
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.6
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.35
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.26
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.22
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.1
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.09
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.97
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.97
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.94
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.92
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.84
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.84
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.82
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.81
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.79
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.77
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.77
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.74
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.74
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.73
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.72
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.7
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.68
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.66
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.66
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.65
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.61
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.59
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.59
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.58
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.58
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.57
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.55
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.54
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.53
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.53
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.53
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.52
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.51
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.5
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.49
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.45
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.44
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.42
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.42
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.41
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.39
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.39
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.38
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.38
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.38
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.36
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.35
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.33
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.28
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.28
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.27
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.25
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.24
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.22
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.22
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.2
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.19
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.17
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.17
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.15
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.13
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.1
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.09
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.07
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.05
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.03
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.92
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.91
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.85
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.76
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.74
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.73
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.62
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.61
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.6
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.59
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.55
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.53
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	96.47
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.42
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	96.42
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.39
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.3
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	96.27
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.24
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.16
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.15
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.11
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.1
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.04
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.03
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.99
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.94
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.94
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.91
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.87
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.75
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.73
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.67
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.65
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.61
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.6
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.57
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.56
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.55
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.5
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.39
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.37
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.37
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.33
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.31
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.28
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.23
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.22
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.21
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.13
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.11
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.02
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.96
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.93
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.92
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.92
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.89
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	94.84
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.65
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.57
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.55
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.54
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.54
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.48
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.4
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.32
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.27
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.25
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.16
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.09
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.07
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.07
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.02
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.99
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	93.97
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.93
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.87
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.84
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.76
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.72
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.67
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.61
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.43
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.43
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.38
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.3
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.24
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.06
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	92.96
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.92
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	92.81
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.79
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.59
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.35
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.05
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.95
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.78
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	91.51
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.24
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.19
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.94
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.92
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.71
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.5
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	90.26
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.25
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.11
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	89.92
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	89.83
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.79
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.77
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	89.62
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.6
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	89.58
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	89.43
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	89.41
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.32
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	88.79
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	88.74
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	88.66
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	88.66
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	88.35
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	88.34
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	88.08
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.53
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	86.61
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	85.98
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	85.77
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	85.69
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	85.65
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.25
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.24
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.14
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.44
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.25
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.97
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	83.54
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	83.32
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	83.09
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.88
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	82.35
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	82.34
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	81.24
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	80.79
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	80.75
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	80.73
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.54
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.48
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	80.47
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.4

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.1e-35  Score=252.21  Aligned_cols=249  Identities=81%  Similarity=1.230  Sum_probs=212.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      ++++|||||||||||+++++.|+++  ||  .|+++.|++++...+...++++.+|+.|.+.+.++++++|+|||+++..
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~--g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEG--SDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAV   79 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHT--TTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHC--CCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEeec
Confidence            4689999999999999999999999  65  5777889988888888889999999999999999999999999999986


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQ  238 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~  238 (331)
                      .......++..................+|+.++.+++..+...+.+++.+.|+.....+..+........|...+...+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
T d2q46a1          80 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ  159 (252)
T ss_dssp             CEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHH
T ss_pred             cccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhh
Confidence            65544444444444444445555566888999999999999999999999999887777766666665778888999999


Q ss_pred             HHHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHH
Q 046297          239 YLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTK  318 (331)
Q Consensus       239 ~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~  318 (331)
                      +..+.+++++++||+++||+.......+.+..........+++|++|+|++++.++++++..|++|||++++++...++.
T Consensus       160 ~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~  239 (252)
T d2q46a1         160 YLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK  239 (252)
T ss_dssp             HHHHSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCC
T ss_pred             hhhcccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHH
Confidence            99999999999999999999887766666666666677788999999999999999999888999999987667778899


Q ss_pred             HHHHHHHHhhccC
Q 046297          319 DFKALFSQITTRF  331 (331)
Q Consensus       319 e~~~~~~~~~g~~  331 (331)
                      |+.++++++.+||
T Consensus       240 ~~~~lf~~i~~r~  252 (252)
T d2q46a1         240 DFKALFSQVTSRF  252 (252)
T ss_dssp             CHHHHHTTCCCCC
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999999997

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-33  Score=258.23  Aligned_cols=225  Identities=18%  Similarity=0.184  Sum_probs=174.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-----hhhh-------cCCCCcEEEccCCCcccHHHHhcC--C
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-----SKQK-------IGGADDLFIGDIRDSNSIIPAIQG--I  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-----~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~~--~  148 (331)
                      |+|||||||||||++|+++|+++  ||+|++++|...     +.+.       ..++++++++|++|.+.+.+++++  +
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence            67999999999999999999999  999999999542     2221       234589999999999999999984  5


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC---eEEEEccCCCCC--------C
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK---QIVLVGSMGGTN--------L  217 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk---~~v~~SS~~~~~--------~  217 (331)
                      |+|+|+|+....      ..+..+|+.++       ++|+.|+.+|+++|++.+++   +||++||..++.        |
T Consensus        80 d~v~h~aa~~~~------~~~~~~~~~~~-------~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E  146 (357)
T d1db3a_          80 DEVYNLGAMSHV------AVSFESPEYTA-------DVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKE  146 (357)
T ss_dssp             SEEEECCCCCTT------TTTTSCHHHHH-------HHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             CEEEEeeccccc------chhhhCHHHHH-------HHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCC
Confidence            999999997543      33456666666       89999999999999998764   799999986542        2


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc-----------hhhhhccCCccc-c---CCcc
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG-----------IRELLVGKDDEL-L---QTET  278 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~-----------~~~~~~~~~~~~-~---~~~~  278 (331)
                      +.|..  +.+.|+.+|..+|++++    +++++++++||+++|||...           +.....+....+ .   ...+
T Consensus       147 ~~~~~--P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r  224 (357)
T d1db3a_         147 TTPFY--PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR  224 (357)
T ss_dssp             TSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred             CCCCC--CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeee
Confidence            22332  23789999999998776    46899999999999998532           122223333332 2   2346


Q ss_pred             cccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          279 RTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      +++|++|+|++++.+++.+  .+++||+++   |+.+|+.|+++++.+.+|
T Consensus       225 ~~~~v~D~~~a~~~~~~~~--~~~~yni~s---g~~~s~~~~~~~~~~~~g  270 (357)
T d1db3a_         225 DWGHAKDYVKMQWMMLQQE--QPEDFVIAT---GVQYSVRQFVEMAAAQLG  270 (357)
T ss_dssp             CCEEHHHHHHHHHHTTSSS--SCCCEEECC---CCCEEHHHHHHHHHHTTT
T ss_pred             cceeechHHHHHHHHHhCC--CCCeEEECC---CCceehHHHHHHHHHHhC
Confidence            8999999999999998765  357999999   899999999999999876

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-32  Score=231.06  Aligned_cols=202  Identities=19%  Similarity=0.196  Sum_probs=163.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      |.++||+||||||+||++++++|+++  ||+|++++|++++.... ..+++++.+|+.|.+++.++++++|+|||++|..
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~   78 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccC
Confidence            56899999999999999999999999  99999999998886654 3569999999999999999999999999999863


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQ  238 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~  238 (331)
                      ...                    ...+++..+++++++++++++++|||++||.+.+....... .....|...|..+|+
T Consensus        79 ~~~--------------------~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~-~~~~~~~~~~~~~e~  137 (205)
T d1hdoa_          79 NDL--------------------SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-PRLQAVTDDHIRMHK  137 (205)
T ss_dssp             TCC--------------------SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-GGGHHHHHHHHHHHH
T ss_pred             Cch--------------------hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc-ccccccchHHHHHHH
Confidence            221                    11266888999999999999999999999987644332222 222568899999999


Q ss_pred             HHHhcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          239 YLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       239 ~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      ++++.+++|++|||+.+++........+...    ...+..+|+++|+|++++.+++++++.|+.+.++.
T Consensus       138 ~l~~~~~~~tiirp~~~~~~~~~~~~~~~~~----~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         138 VLRESGLKYVAVMPPHIGDQPLTGAYTVTLD----GRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             HHHHTCSEEEEECCSEEECCCCCSCCEEESS----SCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             HHHhcCCceEEEecceecCCCCcccEEEeeC----CCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            9999999999999999987643211111100    12346789999999999999999988899888874

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-33  Score=251.62  Aligned_cols=228  Identities=16%  Similarity=0.120  Sum_probs=171.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      +||||||||+||||++|+++|+++  ||+|++++|.. .+.+.+........+|+.|.+.+..++.++|+|||+|+....
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~   78 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP   78 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCc
Confidence            478999999999999999999999  99999998743 222223222333344555555555667789999999986432


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC--------CC-CCcchH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL--------NS-LGNGNI  229 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~--------~~-~~~~~y  229 (331)
                            +....+|...+       ++|+.++.+++++|++.++ +|||+||..++....  |.        .+ .+.+.|
T Consensus        79 ------~~~~~~~~~~~-------~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y  144 (312)
T d2b69a1          79 ------PNYMYNPIKTL-------KTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY  144 (312)
T ss_dssp             ------HHHTTCHHHHH-------HHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHH
T ss_pred             ------hhHHhCHHHHH-------HHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHH
Confidence                  11123444444       8899999999999999987 899999986543211  10        11 223789


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------hhhhhccCCccccC---CcccccCHHHHHHHHHH
Q 046297          230 LVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------IRELLVGKDDELLQ---TETRTIARADVAEVCIQ  292 (331)
Q Consensus       230 ~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------~~~~~~~~~~~~~~---~~~~~i~v~Dva~~~~~  292 (331)
                      +.+|..+|.+++    +++++++++||+++|||...          +.+.+.|+...+++   ..++++|++|++++++.
T Consensus       145 ~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~  224 (312)
T d2b69a1         145 DEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  224 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHH
Confidence            999999998875    56999999999999998643          23455676666653   33789999999999999


Q ss_pred             HhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          293 ALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       293 ~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++...  +.+||+++   ++..++.++++++++.+|.
T Consensus       225 ~~~~~~--~~~~n~~~---~~~~~~~~~~~~i~~~~~~  257 (312)
T d2b69a1         225 LMNSNV--SSPVNLGN---PEEHTILEFAQLIKNLVGS  257 (312)
T ss_dssp             HHTSSC--CSCEEESC---CCEEEHHHHHHHHHHHHTC
T ss_pred             HHhhcc--CCceEecC---CcccchhhHHHHHHHHhCC
Confidence            987653  45899999   9999999999999998874

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.97  E-value=5.7e-32  Score=243.35  Aligned_cols=227  Identities=16%  Similarity=0.185  Sum_probs=176.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEE------EecC-----Cchhhhc--CCCCcEEEccCCCcccHHHHhcCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARG------LVRT-----EESKQKI--GGADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~------l~R~-----~~~~~~l--~~~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      ||||||||+||||++|++.|+++  ||+|.+      +++.     ......+  ...+.++.+|+.+..........+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~--g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d   78 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAG--AYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVD   78 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--SCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccc
Confidence            68999999999999999999999  886544      3321     1112222  2358899999999999998889999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC--------CCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN--------LNHPL  221 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~--------~~~~~  221 (331)
                      .|+|+|+.....      ....++...+       ++|+.++.+++++|++.++++||++||..++.        |+.|.
T Consensus        79 ~vi~~a~~~~~~------~~~~~~~~~~-------~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~  145 (322)
T d1r6da_          79 AIVHFAAESHVD------RSIAGASVFT-------ETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL  145 (322)
T ss_dssp             EEEECCSCCCHH------HHHHCCHHHH-------HHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred             eEEeeccccccc------ccccchHHHh-------hhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCC
Confidence            999999863221      1112233333       78999999999999999999999999986532        23333


Q ss_pred             CCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc--------hhhhhccCCccccC---CcccccCHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQ---TETRTIARADV  286 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~---~~~~~i~v~Dv  286 (331)
                      .  +.+.|+.+|..+|.+++    +++++++++||+++|||...        +.+...++...+.+   ..++++|++|+
T Consensus       146 ~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~  223 (322)
T d1r6da_         146 E--PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDH  223 (322)
T ss_dssp             C--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHH
T ss_pred             C--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHH
Confidence            2  23679999999998875    56999999999999998754        23445566655543   34789999999


Q ss_pred             HHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          287 AEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       287 a~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++++.+++++. .+++||+++   ++..++.|+++.+.+.+|.
T Consensus       224 a~ai~~~~~~~~-~~~~~ni~~---~~~~s~~e~~~~i~~~~~~  263 (322)
T d1r6da_         224 CRGIALVLAGGR-AGEIYHIGG---GLELTNRELTGILLDSLGA  263 (322)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECC---CCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhCCC-CCCeeEEee---cccchhHHHHHHHHHHhCC
Confidence            999999998875 467999999   9999999999999998874

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=4.1e-32  Score=248.22  Aligned_cols=228  Identities=14%  Similarity=0.101  Sum_probs=173.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc------hhhhc--CCCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE------SKQKI--GGADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~------~~~~l--~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      ||||||||+||||++|+++|+++  ||+|++..++..      ....+  .++++++++|++|.+.+.++++  ++|+||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~--g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHH--CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            68999999999999999999999  998665544321      12222  2358899999999999999887  589999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC---------CCeEEEEccCCCCCCCC----
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG---------AKQIVLVGSMGGTNLNH----  219 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~---------vk~~v~~SS~~~~~~~~----  219 (331)
                      |+|+....      +....+|..++       ++|+.|+.+++++|++.+         +++||++||..++....    
T Consensus        79 hlAa~~~~------~~~~~~p~~~~-------~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (361)
T d1kewa_          79 HLAAESHV------DRSITGPAAFI-------ETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             ECCSCCCH------HHHHHCTHHHH-------HHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             ECccccch------hhHHhCHHHHH-------HHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCc
Confidence            99986332      11223444444       999999999999998764         45899999986542111    


Q ss_pred             -------C-----CCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc--------hhhhhccCCccccC
Q 046297          220 -------P-----LNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQ  275 (331)
Q Consensus       220 -------~-----~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~  275 (331)
                             |     ....+.+.|+.+|..+|.++.    +++++++++||+++|||...        ......|++..+++
T Consensus       146 ~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g  225 (361)
T d1kewa_         146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred             cccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeC
Confidence                   0     011223679999999998876    47999999999999999753        23344566655553


Q ss_pred             ---CcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          276 ---TETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       276 ---~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                         ..++|+|++|+|++++.+++++.. +++|||++   ++..++.|+++.+.+..+
T Consensus       226 ~g~~~r~~i~v~D~a~ai~~~~~~~~~-~~~~Ni~s---~~~~s~~~~~~~i~~~~~  278 (361)
T d1kewa_         226 KGDQIRDWLYVEDHARALHMVVTEGKA-GETYNIGG---HNEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHCCT-TCEEEECC---CCEEEHHHHHHHHHHHHH
T ss_pred             CCCeEEeCEEHHHHHHHHHHHHhcCCC-CCeEEECC---CCCcchHHHHhHhhhhcc
Confidence               347899999999999999988754 67999999   899999999999887654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.3e-31  Score=242.62  Aligned_cols=230  Identities=20%  Similarity=0.225  Sum_probs=172.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----h---hh-cCCCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----K---QK-IGGADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----~---~~-l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      ||||||||+||||++|+++|+++  ||+|++++|....    .   +. ...++.++++|++|.+.+.++++  ++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            67999999999999999999999  9999999873211    1   11 23469999999999999999998  799999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCC-------CCCC
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL-------NSLG  225 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~-------~~~~  225 (331)
                      |+|+....      +....+|+..+       ++|+.|+.+++++|++.++++||++||..++......       ...+
T Consensus        79 HlAa~~~~------~~~~~~~~~~~-------~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p  145 (338)
T d1udca_          79 HFAGLKAV------GESVQKPLEYY-------DNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_dssp             ECCSCCCH------HHHHHCHHHHH-------HHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             ECCCccch------hhHHhCHHHHH-------HhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCC
Confidence            99986321      11223344444       8999999999999999999999999998654322110       1123


Q ss_pred             cchHHHHHHHHHHHHHh-----cCCCEEEEecCcccCCCcc-------------h----hhhhccCCc--ccc-------
Q 046297          226 NGNILVWKRKAEQYLAD-----SGIPYTIIRAGGLQDKEGG-------------I----RELLVGKDD--ELL-------  274 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~~-----~~~~~~ilrp~~v~g~~~~-------------~----~~~~~~~~~--~~~-------  274 (331)
                      .+.|+.+|..+|+++.+     .+++++++||+++||+...             +    .....+...  .+.       
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~  225 (338)
T d1udca_         146 QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSST
T ss_pred             cchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccC
Confidence            47899999999988763     5799999999999997532             1    111112211  111       


Q ss_pred             --CCcccccCHHHHHHHHHHHhcCc--ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          275 --QTETRTIARADVAEVCIQALQFE--EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       275 --~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                        ...++++|++|++.++..+....  ...+++||+++   +++.++.|+++.+.+++|+
T Consensus       226 ~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~---~~~~si~e~~~~i~~~~g~  282 (338)
T d1udca_         226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGA---GVGNSVLDVVNAFSKACGK  282 (338)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESC---SSCEEHHHHHHHHHHHHTS
T ss_pred             CCCceeeEEEEeehhhhccccccccccccCcceeeecC---CCCCcHHHHHHHHHHHHCC
Confidence              12377899999999887766533  34467999999   8999999999999999874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=6.2e-31  Score=240.29  Aligned_cols=231  Identities=14%  Similarity=0.092  Sum_probs=176.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      ++||||||||+||||++|+++|+++  ||+|++++|.... .........+..+|+.+.+.+.++++++|+|+|+|+...
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~   91 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG   91 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccccc
Confidence            4688999999999999999999999  9999999876543 222334578999999999999999999999999998643


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--C-----------CCCCCc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--P-----------LNSLGN  226 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~-----------~~~~~~  226 (331)
                      ...     .....+...       ...|+.++.+++++|+++++++||++||...+....  +           .+..+.
T Consensus        92 ~~~-----~~~~~~~~~-------~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~  159 (363)
T d2c5aa1          92 GMG-----FIQSNHSVI-------MYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ  159 (363)
T ss_dssp             CHH-----HHTTCHHHH-------HHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS
T ss_pred             ccc-----ccccccccc-------cccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCC
Confidence            311     001222222       378999999999999999999999999986533111  0           011223


Q ss_pred             chHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch-------------hhhhccCCccccC---CcccccCHHHH
Q 046297          227 GNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI-------------RELLVGKDDELLQ---TETRTIARADV  286 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~-------------~~~~~~~~~~~~~---~~~~~i~v~Dv  286 (331)
                      +.|+.+|..+|++++    +++++++++||+++||+.+..             ............+   ..++|+|++|+
T Consensus       160 ~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~  239 (363)
T d2c5aa1         160 DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC  239 (363)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHH
Confidence            679999999998775    469999999999999986531             1111122222222   34789999999


Q ss_pred             HHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          287 AEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       287 a~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++++.+++.+  .+++||+++   ++.+++.|+++++.+.+|+
T Consensus       240 ~~~~~~~~~~~--~~~~~ni~~---~~~~s~~~l~~~i~~~~g~  278 (363)
T d2c5aa1         240 VEGVLRLTKSD--FREPVNIGS---DEMVSMNEMAEMVLSFEEK  278 (363)
T ss_dssp             HHHHHHHHHSS--CCSCEEECC---CCCEEHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHhCC--CCCeEEEec---CCcccHHHHHHHHHHHhCC
Confidence            99999988765  356899999   9999999999999998874

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.3e-30  Score=234.52  Aligned_cols=229  Identities=13%  Similarity=0.125  Sum_probs=172.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcC--CCCcEEEccCCCcccHHH-HhcCCCEEEEcccCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIG--GADDLFIGDIRDSNSIIP-AIQGIDALIILTSAV  158 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~--~~~~~v~~Dl~d~~~~~~-~l~~~d~Vi~~ag~~  158 (331)
                      ||||||||+||||++|+++|+++  | ++|+++++.......+.  ++++++++|+++.+.+.+ +++++|+|+|+|+..
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~--g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~   78 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLRE--DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA   78 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHS--TTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence            68999999999999999999999  7 58999998766555543  358999999998766655 667899999999964


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCC--------CCC---C--CCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLN--------HPL---N--SLG  225 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~--------~~~---~--~~~  225 (331)
                      ..             ....+++....++|+.|+.+++++|++.+++. ++.||..++...        .+.   .  ..+
T Consensus        79 ~~-------------~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~-~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p  144 (342)
T d2blla1          79 TP-------------IEYTRNPLRVFELDFEENLRIIRYCVKYRKRI-IFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKP  144 (342)
T ss_dssp             CH-------------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEE-EEECCGGGGBTCCCSSBCTTTCCCBCCCTTCG
T ss_pred             cc-------------cccccCCccccccccccccccccccccccccc-cccccccccccccccccccccccccccccCCC
Confidence            32             11222222334889999999999999998744 566766432211        110   1  112


Q ss_pred             cchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc----------------hhhhhccCCccccC---CcccccC
Q 046297          226 NGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG----------------IRELLVGKDDELLQ---TETRTIA  282 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~----------------~~~~~~~~~~~~~~---~~~~~i~  282 (331)
                      .+.|+.+|..+|++++    +++++++++||+.++|+...                +.+++.|+...+++   ..++++|
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~  224 (342)
T d2blla1         145 RWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD  224 (342)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEE
T ss_pred             cchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecc
Confidence            2679999999998875    46899999999999997532                23445566666553   3478999


Q ss_pred             HHHHHHHHHHHhcCcc--cCCceEEeccCCCCC-CCCHHHHHHHHHHhhcc
Q 046297          283 RADVAEVCIQALQFEE--AKFKAFDLASKPEGT-GTPTKDFKALFSQITTR  330 (331)
Q Consensus       283 v~Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~-~~t~~e~~~~~~~~~g~  330 (331)
                      ++|+|+++..+++++.  ..+++||+++   ++ .+|+.|+++.+.+.+|+
T Consensus       225 v~D~~~a~~~~~~~~~~~~~g~~~Nig~---~~~~~t~~~l~~~i~~~~~~  272 (342)
T d2blla1         225 IRDGIEALYRIIENAGNRCDGEIINIGN---PENEASIEELGEMLLASFEK  272 (342)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTTEEEEECC---TTSEEEHHHHHHHHHHHHHT
T ss_pred             cccccceeeeehhhccccCCCeEEEEec---ccchhHHHHHHHHHHHHhCC
Confidence            9999999999998753  4578999987   55 47999999999998764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=1.2e-30  Score=236.39  Aligned_cols=230  Identities=16%  Similarity=0.098  Sum_probs=179.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch----hh---hc-----CCCCcEEEccCCCcccHHHHhcCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES----KQ---KI-----GGADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~----~~---~l-----~~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      +.|+|||||||||||++|+++|+++  ||+|++++|....    .+   .+     ...++++.+|+.|...+.....+.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~   92 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV   92 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence            4679999999999999999999999  9999999873321    11   11     234889999999999998888999


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCC--------CCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTN--------LNHP  220 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~--------~~~~  220 (331)
                      +.|+|+++.....      ....+|...       .++|+.|+.+++++|+++++++||++||..++.        |+.|
T Consensus        93 ~~v~~~~a~~~~~------~~~~~~~~~-------~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~  159 (341)
T d1sb8a_          93 DYVLHQAALGSVP------RSINDPITS-------NATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTI  159 (341)
T ss_dssp             SEEEECCSCCCHH------HHHHCHHHH-------HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             ccccccccccccc------ccccCccch-------hheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCC
Confidence            9999999853221      112233333       388999999999999999999999999986532        2233


Q ss_pred             CCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc------------hhhhhccCCccccC---Cccccc
Q 046297          221 LNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG------------IRELLVGKDDELLQ---TETRTI  281 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~------------~~~~~~~~~~~~~~---~~~~~i  281 (331)
                      ..+  .+.|+.+|..+|.+++    +.+++++++||+++||+...            ....+.|++..+.+   ..++++
T Consensus       160 ~~p--~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i  237 (341)
T d1sb8a_         160 GKP--LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  237 (341)
T ss_dssp             CCC--CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCC--CCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEE
Confidence            322  3679999999998775    46899999999999998642            13445566655543   348899


Q ss_pred             CHHHHHHHHHHHhcCcc-cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          282 ARADVAEVCIQALQFEE-AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~-~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |++|+|.++..++..+. ..+++||+++   ++..|+.|+++.+.+..++
T Consensus       238 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~---~~~~si~~i~~~i~~~~~~  284 (341)
T d1sb8a_         238 YIENTVQANLLAATAGLDARNQVYNIAV---GGRTSLNQLFFALRDGLAE  284 (341)
T ss_dssp             EHHHHHHHHHHHHTCCGGGCSEEEEESC---SCCEEHHHHHHHHHHHHHH
T ss_pred             EEeccchhhhhhhhccccccceeeeecc---cccchHHHHHHHHHHHhcc
Confidence            99999999999887653 5678999999   8999999999999988763

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=3.6e-30  Score=233.77  Aligned_cols=229  Identities=15%  Similarity=0.139  Sum_probs=174.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-------chhhh-cCCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-------ESKQK-IGGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-------~~~~~-l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      +|+|||||||||||++|+++|+++  ||+|.++.++.       ..... ...+++++.+|++|.+.+.+++.++|.|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~--g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNN--HPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHH--CTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHC--CCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            689999999999999999999999  88766665532       11122 234689999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCC-----CC---------
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNL-----NH---------  219 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~-----~~---------  219 (331)
                      +|+......      ...+|...+       ++|+.|+.++++++++.+. ++|++||..++..     ..         
T Consensus        80 ~a~~~~~~~------~~~~~~~~~-------~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~  145 (346)
T d1oc2a_          80 YAAESHNDN------SLNDPSPFI-------HTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGE  145 (346)
T ss_dssp             CCSCCCHHH------HHHCCHHHH-------HHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTS
T ss_pred             hhhcccccc------hhhCcccce-------eeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCccc
Confidence            998643311      112344444       8899999999999999986 7788887754321     00         


Q ss_pred             ----CCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc--------hhhhhccCCccccC---Ccccc
Q 046297          220 ----PLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELLQ---TETRT  280 (331)
Q Consensus       220 ----~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~~---~~~~~  280 (331)
                          .....+.+.|+.+|..+|.+++    +.+++++++||+++|||...        +.....+....+++   ..+++
T Consensus       146 ~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~  225 (346)
T d1oc2a_         146 KFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDW  225 (346)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEEC
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccc
Confidence                0111223679999999998775    46899999999999998643        23344555555543   44789


Q ss_pred             cCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          281 IARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +|++|+|++++.+++++.. +..|++++   ++..++.++++.+.+.+++
T Consensus       226 i~v~D~a~a~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~i~~~~~~  271 (346)
T d1oc2a_         226 IHTNDHSTGVWAILTKGRM-GETYLIGA---DGEKNNKEVLELILEKMGQ  271 (346)
T ss_dssp             EEHHHHHHHHHHHHHHCCT-TCEEEECC---SCEEEHHHHHHHHHHHTTC
T ss_pred             cchhhHHHHHHHHHhhccc-Cccccccc---cccccchHHHHHHHHHhCC
Confidence            9999999999998887654 56899999   8999999999999988775

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.2e-29  Score=228.62  Aligned_cols=230  Identities=19%  Similarity=0.187  Sum_probs=169.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-------hhh-cCCCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-------KQK-IGGADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-------~~~-l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      |.||||||+||||++|+++|+++  ||+|++++|....       ... ...+++++++|++|.+.+.++++  ++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            56999999999999999999999  9999999863221       111 24569999999999999999887  799999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC------C----CC
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH------P----LN  222 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~------~----~~  222 (331)
                      |+|+.....      ....+|+.+       ..+|+.++.+++++|++.++++||++||..++....      +    ..
T Consensus        80 hlAa~~~~~------~~~~~~~~~-------~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~  146 (347)
T d1z45a2          80 HFAGLKAVG------ESTQIPLRY-------YHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECP  146 (347)
T ss_dssp             ECCSCCCHH------HHHHSHHHH-------HHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             Ecccccccc------ccccCcccc-------cccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccC
Confidence            999964321      111233333       378999999999999999999999999986542111      0    11


Q ss_pred             CCCcchHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcc-------------h----hhhhccCCcc--ccCC-
Q 046297          223 SLGNGNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGG-------------I----RELLVGKDDE--LLQT-  276 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~-------------~----~~~~~~~~~~--~~~~-  276 (331)
                      ..+.+.|+.+|..+|++++.      .+++++++||+++||+...             +    .....+....  +.+. 
T Consensus       147 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~  226 (347)
T d1z45a2         147 LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDD  226 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC---
T ss_pred             CCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCC
Confidence            12236799999999987753      5789999999999986431             1    1112222222  2211 


Q ss_pred             --------cccccCHHHHHHHHHHHhcCc------ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          277 --------ETRTIARADVAEVCIQALQFE------EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       277 --------~~~~i~v~Dva~~~~~~l~~~------~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                              .++++++.|++.+++.+++..      ...+++||+++   ++++|+.|+++++.+..|+
T Consensus       227 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~---~~~~s~~e~~~~i~~~~~~  291 (347)
T d1z45a2         227 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS---GKGSTVFEVYHAFCKASGI  291 (347)
T ss_dssp             ---CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC---SCCEEHHHHHHHHHHHHTC
T ss_pred             ccccCCceeeeeeeeecccccccccccccccccccccccccceecC---CCcccHHHHHHHHHHHHCC
Confidence                    256778888999988887642      23467999999   8999999999999998874

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-29  Score=228.98  Aligned_cols=230  Identities=18%  Similarity=0.191  Sum_probs=170.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc----------hhh---h-cCCCCcEEEccCCCcccHHHHhcC-
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE----------SKQ---K-IGGADDLFIGDIRDSNSIIPAIQG-  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~----------~~~---~-l~~~~~~v~~Dl~d~~~~~~~l~~-  147 (331)
                      +|||||||+||||++|+++|+++  ||+|++++|...          ...   . ...++.++++|++|.+.+.+++.+ 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence            68999999999999999999999  999999975211          111   1 234689999999999999998864 


Q ss_pred             -CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC------
Q 046297          148 -IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP------  220 (331)
Q Consensus       148 -~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~------  220 (331)
                       .++++|+|+....      .....+|...+       ++|+.++.+++++++++++++|+++||...+.....      
T Consensus        81 ~~~~i~h~Aa~~~~------~~~~~~p~~~~-------~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~  147 (346)
T d1ek6a_          81 SFMAVIHFAGLKAV------GESVQKPLDYY-------RVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEA  147 (346)
T ss_dssp             CEEEEEECCSCCCH------HHHHHCHHHHH-------HHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ccccccccccccCc------HhhHhCHHHHH-------HhhhcccccccchhhhcCcccccccccceeeecccccccccc
Confidence             5689999986432      11122344444       889999999999999999999999999854332211      


Q ss_pred             -CCCCCcchHHHHHHHHHHHHHh-----cCCCEEEEecCcccCCCcc-----------------hhhhhccCCcc--c--
Q 046297          221 -LNSLGNGNILVWKRKAEQYLAD-----SGIPYTIIRAGGLQDKEGG-----------------IRELLVGKDDE--L--  273 (331)
Q Consensus       221 -~~~~~~~~y~~sK~~~e~~~~~-----~~~~~~ilrp~~v~g~~~~-----------------~~~~~~~~~~~--~--  273 (331)
                       ......++|+.+|..+|+.+++     .+++++++||+.+||+...                 +.....+....  +  
T Consensus       148 ~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g  227 (346)
T d1ek6a_         148 HPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFG  227 (346)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEEC
T ss_pred             ccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcC
Confidence             1122336899999999977653     5899999999999997532                 11111222111  1  


Q ss_pred             -----c--CCcccccCHHHHHHHHHHHhcCc--ccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          274 -----L--QTETRTIARADVAEVCIQALQFE--EAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       274 -----~--~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                           .  ...++++|++|+|.++..++...  ...+++||+++   ++..++.|+++.+.++.|+
T Consensus       228 ~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~---~~~~s~~dl~~~i~~~~~~  290 (346)
T d1ek6a_         228 NDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT---GTGYSVLQMVQAMEKASGK  290 (346)
T ss_dssp             SCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC---SCCEEHHHHHHHHHHHHCS
T ss_pred             CcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCC---CCcccHHHHHHHHHHHhCC
Confidence                 1  12368999999999998876543  34567999999   8999999999999999874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=1.7e-29  Score=229.03  Aligned_cols=225  Identities=18%  Similarity=0.146  Sum_probs=168.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---------CCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---------GADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---------~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      +++||||||+||||++|+++|+++  ||+|++++|+.++...+.         ....++.+|+.|.+.+.+++.++|+|+
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            689999999999999999999999  999999999876544321         123457799999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCeEEEEccCCCCCCCCC-----------
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQIVLVGSMGGTNLNHP-----------  220 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~~v~~SS~~~~~~~~~-----------  220 (331)
                      |+++.....         .++...+       ..|+.|+.+++++|++. ++++|||+||..+.....+           
T Consensus        89 ~~a~~~~~~---------~~~~~~~-------~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~  152 (342)
T d1y1pa1          89 HIASVVSFS---------NKYDEVV-------TPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKS  152 (342)
T ss_dssp             ECCCCCSCC---------SCHHHHH-------HHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTC
T ss_pred             hhccccccc---------ccccccc-------cchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccc
Confidence            999864321         2233333       67999999999999886 6999999999743111000           


Q ss_pred             ---------------CCCCCcchHHHHHHHHHHHHH----hc--CCCEEEEecCcccCCCcc-----------hhhhhcc
Q 046297          221 ---------------LNSLGNGNILVWKRKAEQYLA----DS--GIPYTIIRAGGLQDKEGG-----------IRELLVG  268 (331)
Q Consensus       221 ---------------~~~~~~~~y~~sK~~~e~~~~----~~--~~~~~ilrp~~v~g~~~~-----------~~~~~~~  268 (331)
                                     ......+.|+.+|..+|.++.    ++  +++++++||++++|+...           ...++.+
T Consensus       153 ~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g  232 (342)
T d1y1pa1         153 WNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG  232 (342)
T ss_dssp             CCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTT
T ss_pred             cccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcC
Confidence                           000111579999999997553    33  577889999999997421           1233333


Q ss_pred             CCccc--cCCcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhh
Q 046297          269 KDDEL--LQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       269 ~~~~~--~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~  328 (331)
                      .....  .+..++++|++|+|++++.+++++...++ |++++   ++.+++.|+++++.+..
T Consensus       233 ~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~-~~~~~---~~~~t~~eia~~i~k~~  290 (342)
T d1y1pa1         233 EVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERR-RVYGT---AGTFDWNTVLATFRKLY  290 (342)
T ss_dssp             CCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTCCSC-EEEEC---CEEECHHHHHHHHHHHC
T ss_pred             CcCcccCCccceeeeeHHHHHHHHHHhhcCccccce-EEEEc---CCceEHHHHHHHHHHHc
Confidence            33322  24457899999999999999998877665 55777   78899999999998875

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.1e-29  Score=214.26  Aligned_cols=203  Identities=20%  Similarity=0.172  Sum_probs=155.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCC--CeEEEEecCCchhhh-cCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQ--YAARGLVRTEESKQK-IGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g--~~V~~l~R~~~~~~~-l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |.+++|||||||||||++|+++|+++  |  ++|++++|++.+... ....+.++.+|+.+.+.+.++++++|+|+|++|
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~--g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~   89 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLG   89 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC--CCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccccc
Confidence            56789999999999999999999999  6  489999998755332 334588889999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHH
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKA  236 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~  236 (331)
                      .....         .++..+       .++|+.++.+++++|++.++++||++|+.+++...       .+.|+.+|+.+
T Consensus        90 ~~~~~---------~~~~~~-------~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~-------~~~Y~~~K~~~  146 (232)
T d2bkaa1          90 TTRGK---------AGAEGF-------VRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS-------NFLYLQVKGEV  146 (232)
T ss_dssp             CCHHH---------HHHHHH-------HHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-------SSHHHHHHHHH
T ss_pred             ccccc---------cchhhh-------hhhcccccceeeecccccCccccccCCccccccCc-------cchhHHHHHHh
Confidence            53211         111222       37789999999999999999999999998864322       15699999999


Q ss_pred             HHHHHhcCCC-EEEEecCcccCCCcchhh--hhcc-CCcccc--CCcccccCHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          237 EQYLADSGIP-YTIIRAGGLQDKEGGIRE--LLVG-KDDELL--QTETRTIARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       237 e~~~~~~~~~-~~ilrp~~v~g~~~~~~~--~~~~-~~~~~~--~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      |+++++.+++ ++|+||+.+||+......  .+.. ....++  .....+|+++|+|++++.++.++.. ++.+.+.+
T Consensus       147 E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         147 EAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             HHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             hhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            9999999886 899999999998754211  1110 000111  1234569999999999999887754 45677765

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.96  E-value=7.4e-29  Score=228.08  Aligned_cols=232  Identities=17%  Similarity=0.170  Sum_probs=168.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC---------chhh---------------hcCCCCcEEEccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE---------ESKQ---------------KIGGADDLFIGDIRD  137 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~---------~~~~---------------~l~~~~~~v~~Dl~d  137 (331)
                      .||||||||+||||++|+++|+++. ||+|+++++-.         +..+               .....+.++.+|++|
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~-~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhC-CCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence            4789999999999999999999743 99999997411         0000               012347899999999


Q ss_pred             cccHHHHhc---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC
Q 046297          138 SNSIIPAIQ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       138 ~~~~~~~l~---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~  214 (331)
                      .+.+.++++   ++|+|+|+|+......      ...++..+       .++|+.++.++++++++.++++++++|+...
T Consensus        81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~------~~~~~~~~-------~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~  147 (383)
T d1gy8a_          81 EDFLNGVFTRHGPIDAVVHMCAFLAVGE------SVRDPLKY-------YDNNVVGILRLLQAMLLHKCDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHH------HHHCHHHH-------HHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred             HHHhhhhhhccceeehhhcccccccccc------cccccccc-------cccccccccccchhhhccCCccccccccccc
Confidence            999998885   6899999998643310      11122223       3789999999999999999999999888754


Q ss_pred             CCCCC---------C----CCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcchh--------------
Q 046297          215 TNLNH---------P----LNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGIR--------------  263 (331)
Q Consensus       215 ~~~~~---------~----~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~~--------------  263 (331)
                      +....         +    ....+.+.|+.+|...|.+++    .++++++++||+++||+.....              
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~  227 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPI  227 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHH
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHH
Confidence            22111         1    111223779999999998876    4799999999999999865311              


Q ss_pred             ---hhh----------------ccCCcccc-------C--CcccccCHHHHHHHHHHHhcCc--------ccCCceEEec
Q 046297          264 ---ELL----------------VGKDDELL-------Q--TETRTIARADVAEVCIQALQFE--------EAKFKAFDLA  307 (331)
Q Consensus       264 ---~~~----------------~~~~~~~~-------~--~~~~~i~v~Dva~~~~~~l~~~--------~~~~~~~~i~  307 (331)
                         ..+                .+....+.       +  ..++++|++|+|++++.+++..        ...+++||++
T Consensus       228 ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~  307 (383)
T d1gy8a_         228 ILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLG  307 (383)
T ss_dssp             HHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEES
T ss_pred             HHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeC
Confidence               010                01111111       1  1267999999999999988642        2345799999


Q ss_pred             cCCCCCCCCHHHHHHHHHHhhcc
Q 046297          308 SKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       308 ~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +   ++++++.|+++.+.+..|.
T Consensus       308 s---~~~~s~~el~~~i~~~~~~  327 (383)
T d1gy8a_         308 T---SRGYSVREVIEVARKTTGH  327 (383)
T ss_dssp             C---SCCEEHHHHHHHHHHHHCC
T ss_pred             C---CCceeHHHHHHHHHHHhCC
Confidence            9   8999999999999998874

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=3.7e-29  Score=230.81  Aligned_cols=234  Identities=17%  Similarity=0.162  Sum_probs=166.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC----------c----------hhh----hcCCCCcEEEccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE----------E----------SKQ----KIGGADDLFIGDIRD  137 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~----------~----------~~~----~l~~~~~~v~~Dl~d  137 (331)
                      +|||||||||||||++|+++|+++  ||+|++++.-.          .          ...    ...++++++++|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC
Confidence            478999999999999999999999  99999986210          0          000    013468999999999


Q ss_pred             cccHHHHhc--CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCC
Q 046297          138 SNSIIPAIQ--GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGG  214 (331)
Q Consensus       138 ~~~~~~~l~--~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~  214 (331)
                      .+.+.++++  ++|+|||+|+......      +..++..    .....++|+.|+.+++++|++.+++ +|++.||...
T Consensus        79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~------s~~~~~~----~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~  148 (393)
T d1i24a_          79 FEFLAESFKSFEPDSVVHFGEQRSAPY------SMIDRSR----AVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE  148 (393)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHH------HTSCHHH----HHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG
T ss_pred             HHHHHHHHHhhcchheecccccccccc------ccccccc----cccccccccccccHHHHHHHHhccccceeecccccc
Confidence            999999997  5799999998643211      1111110    1112378999999999999998876 4666666543


Q ss_pred             CCCCC-------------------CCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch---------
Q 046297          215 TNLNH-------------------PLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI---------  262 (331)
Q Consensus       215 ~~~~~-------------------~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~---------  262 (331)
                      +....                   +.+..+.+.|+.+|..+|.++.    +++++++++||+++||+....         
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~  228 (393)
T d1i24a_         149 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN  228 (393)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred             ccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccc
Confidence            22111                   1112233679999999998764    679999999999999986421         


Q ss_pred             ----------------hhhhccCCccccC---CcccccCHHHHHHHHHHHhcCcccCCceEEe-ccCCCCCCCCHHHHHH
Q 046297          263 ----------------RELLVGKDDELLQ---TETRTIARADVAEVCIQALQFEEAKFKAFDL-ASKPEGTGTPTKDFKA  322 (331)
Q Consensus       263 ----------------~~~~~~~~~~~~~---~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i-~~~~~~~~~t~~e~~~  322 (331)
                                      .....+++..+.+   ..++|+|++|++++++.+++++...++.+.+ .+   ++.+++.|+++
T Consensus       229 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~---~~~~si~el~~  305 (393)
T d1i24a_         229 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQF---TEQFSVNELAS  305 (393)
T ss_dssp             CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEEC---SEEEEHHHHHH
T ss_pred             ccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCC---CCeeEHHHHHH
Confidence                            1223344444433   3378999999999999999987766643333 23   56789999999


Q ss_pred             HHHHhhcc
Q 046297          323 LFSQITTR  330 (331)
Q Consensus       323 ~~~~~~g~  330 (331)
                      ++.++.++
T Consensus       306 ~i~~~~~~  313 (393)
T d1i24a_         306 LVTKAGSK  313 (393)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99988654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=6.6e-29  Score=222.72  Aligned_cols=226  Identities=20%  Similarity=0.178  Sum_probs=170.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-----hhhc--CCCCcEEEccCCCcccHHHHhc--CCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-----KQKI--GGADDLFIGDIRDSNSIIPAIQ--GIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~l--~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~  153 (331)
                      |+|||||||||||++|+++|+++  ||+|++++|....     ++.+  .++++++.+|++|.+.+.+.+.  ..++++|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~   78 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   78 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence            57999999999999999999999  9999999997532     2222  2358899999999999988876  4678888


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCC--------CCCCCCCCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGT--------NLNHPLNSL  224 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~--------~~~~~~~~~  224 (331)
                      +++.....      ....++...+       +.|+.|+.+++++|++.+++ +|++.||...+        +|+.|..  
T Consensus        79 ~a~~~~~~------~~~~~~~~~~-------~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~--  143 (321)
T d1rpna_          79 LAAQSFVG------ASWNQPVTTG-------VVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY--  143 (321)
T ss_dssp             CCSCCCHH------HHTTSHHHHH-------HHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC--
T ss_pred             cccccccc------ccccchHHHH-------hhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcc--
Confidence            88753331      1122333333       78999999999999999866 67777776432        1222222  


Q ss_pred             CcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc-----------hhhhhccCCccc-cC---CcccccCHHH
Q 046297          225 GNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG-----------IRELLVGKDDEL-LQ---TETRTIARAD  285 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~-----------~~~~~~~~~~~~-~~---~~~~~i~v~D  285 (331)
                      +.+.|+.+|..+|.++.    +++++++++||+++|||...           +.+...+....+ .+   ..++|+|++|
T Consensus       144 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D  223 (321)
T d1rpna_         144 PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD  223 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred             ccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHH
Confidence            33789999999998875    47899999999999998642           122223333332 22   3368999999


Q ss_pred             HHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          286 VAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       286 va~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +|++++.+++++.  +..||+++   ++..++.++++.+.+..|.
T Consensus       224 ~~~~~~~~~~~~~--~~~~ni~~---~~~~s~~~~~~~~~~~~~~  263 (321)
T d1rpna_         224 YVEAMWLMLQQDK--ADDYVVAT---GVTTTVRDMCQIAFEHVGL  263 (321)
T ss_dssp             HHHHHHHHHHSSS--CCCEEECC---SCEEEHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHhcCC--cCCceecc---cccceehhhhHHHHHHhCC
Confidence            9999999998874  35799999   8999999999999988763

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-28  Score=222.31  Aligned_cols=226  Identities=20%  Similarity=0.207  Sum_probs=169.0

Q ss_pred             CeE-EEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-----hhh--------cCCCCcEEEccCCCcccHHHHhc--
Q 046297           83 STV-LVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-----KQK--------IGGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        83 ~~V-lVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-----~~~--------l~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      ||| |||||+||||++|+++|+++  ||+|++++|....     .+.        ...+++++.+|++|++.+.+++.  
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence            568 99999999999999999999  9999999996532     122        12347899999999999999986  


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC---CeEEEEccCCCCC-------
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA---KQIVLVGSMGGTN-------  216 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---k~~v~~SS~~~~~-------  216 (331)
                      ++++++|+++....             ...+.+.....++|+.|+.+++++|+++++   ++||++||..++.       
T Consensus        79 ~~~~v~~~~a~~~~-------------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (347)
T d1t2aa_          79 KPTEIYNLGAQSHV-------------KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQ  145 (347)
T ss_dssp             CCSEEEECCSCCCH-------------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSB
T ss_pred             ccceeeeeeecccc-------------chhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCC
Confidence            67899999986332             112222223338899999999999999875   4899999986542       


Q ss_pred             -CCCCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc-----------hhhhhc-cCCccccC---C
Q 046297          217 -LNHPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG-----------IRELLV-GKDDELLQ---T  276 (331)
Q Consensus       217 -~~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~-----------~~~~~~-~~~~~~~~---~  276 (331)
                       |+.|..  +.+.|+.+|..+|+++.    +++++++++||+++|||...           +..... +......+   .
T Consensus       146 ~E~~~~~--P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~  223 (347)
T d1t2aa_         146 KETTPFY--PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDA  223 (347)
T ss_dssp             CTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTC
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcc
Confidence             222222  23679999999998875    46999999999999998532           111112 22222222   3


Q ss_pred             cccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          277 ETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       277 ~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .++++|++|++++++.++++...  +.|++..   +...++.+..+.+....++
T Consensus       224 ~r~~i~v~D~~~a~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~  272 (347)
T d1t2aa_         224 KRDWGHAKDYVEAMWLMLQNDEP--EDFVIAT---GEVHSVREFVEKSFLHIGK  272 (347)
T ss_dssp             EECCEEHHHHHHHHHHHHHSSSC--CCEEECC---SCCEEHHHHHHHHHHHTTC
T ss_pred             eeeeeEecHHHHHHHHHhhcCCC--ccceecc---ccccccchhhhhhhhhhcc
Confidence            47899999999999999988643  4688888   8889999999888776664

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=3.6e-28  Score=216.15  Aligned_cols=220  Identities=16%  Similarity=0.171  Sum_probs=170.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh--------hc-CCCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ--------KI-GGADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~--------~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      ++||||||||||||++|+++|+++  ||+|++++|++....        .+ ...++++++|+.|.+.+.++++++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~   80 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI   80 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhh
Confidence            578999999999999999999999  999999999764321        11 3458999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHH
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVW  232 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~s  232 (331)
                      ++++....                        ..|..++.+++++|++.+..++++.||.+...............|...
T Consensus        81 ~~~~~~~~------------------------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~  136 (312)
T d1qyda_          81 SALAGGVL------------------------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFID  136 (312)
T ss_dssp             ECCCCSSS------------------------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHH
T ss_pred             hhhhhccc------------------------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHH
Confidence            99975322                        346667888999999998888888888765333322222333568889


Q ss_pred             HHHHHHHHHhcCCCEEEEecCcccCCCcch-----hhhh-ccCCcccc---CCcccccCHHHHHHHHHHHhcCcccCCce
Q 046297          233 KRKAEQYLADSGIPYTIIRAGGLQDKEGGI-----RELL-VGKDDELL---QTETRTIARADVAEVCIQALQFEEAKFKA  303 (331)
Q Consensus       233 K~~~e~~~~~~~~~~~ilrp~~v~g~~~~~-----~~~~-~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~~~~~  303 (331)
                      |..++++.++.+++++++||+.+||+....     .... .+....++   +..+++++++|+|++++.++.++...++.
T Consensus       137 ~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~  216 (312)
T d1qyda_         137 KRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKT  216 (312)
T ss_dssp             HHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSE
T ss_pred             HHHHHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCce
Confidence            999999999999999999999999864321     1111 12222222   34588999999999999999998766665


Q ss_pred             -EEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          304 -FDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       304 -~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                       |++++   ++.+|++|+++.+++++|+
T Consensus       217 ~~~~~~---~~~~s~~e~~~~~~~~~g~  241 (312)
T d1qyda_         217 MYIRPP---MNILSQKEVIQIWERLSEQ  241 (312)
T ss_dssp             EECCCG---GGEEEHHHHHHHHHHHHTC
T ss_pred             EEEeCC---CcCCCHHHHHHHHHHHHCC
Confidence             55555   6779999999999999875

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.6e-27  Score=213.17  Aligned_cols=219  Identities=14%  Similarity=0.164  Sum_probs=163.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      +|||||||||||||++|+++|+++  ||.|+++++..+             .|+.|.+.+.++++  .+|.|+|+|+...
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~~-------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~   66 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDE-------------LNLLDSRAVHDFFASERIDQVYLAAAKVG   66 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTT-------------CCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCchh-------------ccccCHHHHHHHHhhcCCCEEEEcchhcc
Confidence            578999999999999999999999  999887765432             58899999988886  5899999997643


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCC--------C--CC-Ccch
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPL--------N--SL-GNGN  228 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~--------~--~~-~~~~  228 (331)
                      ....     ...++..       ..++|+.++.+++++|+++++++|||+||..++....+.        .  +. ..+.
T Consensus        67 ~~~~-----~~~~~~~-------~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~  134 (315)
T d1e6ua_          67 GIVA-----NNTYPAD-------FIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEP  134 (315)
T ss_dssp             CHHH-----HHHCHHH-------HHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHH
T ss_pred             cccc-----chhhHHH-------HHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCH
Confidence            3100     0011222       237799999999999999999999999999765432211        1  11 1256


Q ss_pred             HHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcch-----------------hhhhccCCccccC---CcccccCHH
Q 046297          229 ILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI-----------------RELLVGKDDELLQ---TETRTIARA  284 (331)
Q Consensus       229 y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~-----------------~~~~~~~~~~~~~---~~~~~i~v~  284 (331)
                      |+.+|..+|++++    +.+++++++||+++|||.+..                 .....+....+.+   ..++++|++
T Consensus       135 Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~  214 (315)
T d1e6ua_         135 YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD  214 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEee
Confidence            9999999998875    569999999999999986431                 1111122222222   237889999


Q ss_pred             HHHHHHHHHhcCcc--------cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          285 DVAEVCIQALQFEE--------AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       285 Dva~~~~~~l~~~~--------~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      |+++++..++.+..        .....++++.   +...++.++++++.+++|+
T Consensus       215 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~i~~~~~~  265 (315)
T d1e6ua_         215 DMAAASIHVMELAHEVWLENTQPMLSHINVGT---GVDCTIRELAQTIAKVVGY  265 (315)
T ss_dssp             HHHHHHHHHHHSCHHHHHHTSBTTBCCEEESC---SCCEEHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHhhhhccccccccccccccccccCC---CcchHHHHHHHHHHHHhCC
Confidence            99999999986542        2346799998   8899999999999998874

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=6.7e-28  Score=217.62  Aligned_cols=227  Identities=19%  Similarity=0.195  Sum_probs=166.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-----hhhhc--------CCCCcEEEccCCCcccHHHHhc--
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-----SKQKI--------GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-----~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      +|++||||||||||+||++.|+++  ||+|++++|...     +.+.+        ...+.++.+|+.+.+.+.+.++  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence            478999999999999999999999  999999999543     22221        1236789999999999998886  


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-----CCCeEEEEccCCC-------
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-----GAKQIVLVGSMGG-------  214 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-----~vk~~v~~SS~~~-------  214 (331)
                      ++|+|+|+|+.....      ....+|...       .+.|+.++.++++++++.     ...++++.||...       
T Consensus        79 ~~D~Vih~Aa~~~~~------~~~~~p~~~-------~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~  145 (339)
T d1n7ha_          79 KPDEVYNLAAQSHVA------VSFEIPDYT-------ADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP  145 (339)
T ss_dssp             CCSEEEECCSCCCHH------HHHHSHHHH-------HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSS
T ss_pred             ccchhhhcccccccc------ccccCcccc-------ccccccccchhhhhhhhcccccccceeeeecccceecccCCCC
Confidence            689999999863321      011233333       378999999999998764     2446777777643       


Q ss_pred             CCCCCCCCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc-----------hhhhhccCCccc-c---C
Q 046297          215 TNLNHPLNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG-----------IRELLVGKDDEL-L---Q  275 (331)
Q Consensus       215 ~~~~~~~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~-----------~~~~~~~~~~~~-~---~  275 (331)
                      .+|+.|..  +.+.|+.+|..+|.++.    .++++++++||+++|||...           ......+....+ .   .
T Consensus       146 ~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~  223 (339)
T d1n7ha_         146 QSETTPFH--PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQ  223 (339)
T ss_dssp             BCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTT
T ss_pred             CCCCCCCC--CcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCC
Confidence            22333333  33779999999998764    57999999999999998633           111222333332 2   2


Q ss_pred             CcccccCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          276 TETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       276 ~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ..++++|++|+|+++..+++++..  ..+++..   +...+..++++++.++.|.
T Consensus       224 ~~rd~~~v~D~a~~~~~~~~~~~~--~~~~~~~---~~~~s~~~~~~~~~~~~~~  273 (339)
T d1n7ha_         224 ASRDWGFAGDYVEAMWLMLQQEKP--DDYVVAT---EEGHTVEEFLDVSFGYLGL  273 (339)
T ss_dssp             CEEECEEHHHHHHHHHHHHTSSSC--CEEEECC---SCEEEHHHHHHHHHHHTTC
T ss_pred             ccccceeeehHHHHHHHHHhcCCC--Ccccccc---ccccccchhhhhhhhhhhc
Confidence            347899999999999999998753  3566776   7889999999999988764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=8.9e-28  Score=212.46  Aligned_cols=216  Identities=19%  Similarity=0.221  Sum_probs=167.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh---------c-CCCCcEEEccCCCcccHHHHhcCCCE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK---------I-GGADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~---------l-~~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      +++||||||||||||++++++|+++  ||+|++++|+......         + ...++++.+|+.+.+.+.+.+++++.
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDV   79 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhcee
Confidence            4689999999999999999999999  9999999997644221         1 23589999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      |+|+++.                            .+..++.+++++++.++++++++.|+.+......+.. .....+.
T Consensus        80 vi~~~~~----------------------------~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~~  130 (307)
T d1qyca_          80 VISTVGS----------------------------LQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAV-EPAKSVF  130 (307)
T ss_dssp             EEECCCG----------------------------GGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCC-TTHHHHH
T ss_pred             eeecccc----------------------------cccchhhHHHHHHHHhccccceeeecccccccccccc-ccccccc
Confidence            9999873                            2445567889999999999999988876433332222 2224566


Q ss_pred             HHHHHHHHHHHhcCCCEEEEecCcccCCCcch-----hhhhccCCcccc---CCcccccCHHHHHHHHHHHhcCcccCCc
Q 046297          231 VWKRKAEQYLADSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELL---QTETRTIARADVAEVCIQALQFEEAKFK  302 (331)
Q Consensus       231 ~sK~~~e~~~~~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~---~~~~~~i~v~Dva~~~~~~l~~~~~~~~  302 (331)
                      ..+...+.++++.+++++++||+++||+....     .....+....++   +..++++|++|+|++++.+++++...++
T Consensus       131 ~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~  210 (307)
T d1qyca_         131 EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNK  210 (307)
T ss_dssp             HHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTE
T ss_pred             cccccccchhhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCc
Confidence            77888899999999999999999999975331     111112222222   3458899999999999999998876565


Q ss_pred             e-EEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          303 A-FDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       303 ~-~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      . |++++   ++.+|+.|+++.+++++|+
T Consensus       211 ~~~~~~~---~~~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         211 TLYLRLP---ANTLSLNELVALWEKKIDK  236 (307)
T ss_dssp             EEECCCG---GGEEEHHHHHHHHHHHTTS
T ss_pred             eeEEeCC---CCccCHHHHHHHHHHHHCC
Confidence            5 55666   7889999999999999885

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.94  E-value=3.8e-27  Score=212.12  Aligned_cols=231  Identities=15%  Similarity=0.120  Sum_probs=167.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC--chh---hhc--CCCCcEEEccCCCcccHHHHhcC--CCEEEEc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE--ESK---QKI--GGADDLFIGDIRDSNSIIPAIQG--IDALIIL  154 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~--~~~---~~l--~~~~~~v~~Dl~d~~~~~~~l~~--~d~Vi~~  154 (331)
                      |||||||+||||++|++.|+++  ||+|+++++-.  ...   ..+  ..+++++.+|++|.+.+.+++++  +|+|||+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~   79 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   79 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence            7999999999999999999999  99999987522  111   111  34689999999999999999975  6999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC---------------
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH---------------  219 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~---------------  219 (331)
                      |+......      ...+|+.       ..++|+.|+.+++++|.+.+++++|+.||........               
T Consensus        80 aa~~~~~~------~~~~~~~-------~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          80 AGQVAMTT------SIDNPCM-------DFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             CCCCCHHH------HHHCHHH-------HHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             cccccccc------cccChHH-------HHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence            98643311      1112333       3388999999999999999988777777754211110               


Q ss_pred             --C------CCCCCcchHHHHHHHHHHHHH----hcCCCEEEEecCcccCCCcc-----------hhhh---h--ccCCc
Q 046297          220 --P------LNSLGNGNILVWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGG-----------IREL---L--VGKDD  271 (331)
Q Consensus       220 --~------~~~~~~~~y~~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~-----------~~~~---~--~~~~~  271 (331)
                        +      ....+.+.|+.+|...|.+..    .++....++|+..+|++...           ....   .  .++..
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF  226 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCce
Confidence              0      001123679999999887754    57899999999999875432           1111   1  13333


Q ss_pred             cccC---CcccccCHHHHHHHHHHHhcCcc-cCCceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          272 ELLQ---TETRTIARADVAEVCIQALQFEE-AKFKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       272 ~~~~---~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      .+.+   ..++++|++|++++++.+++++. ..+++|++.... ++.+++.|+++.+.+..|.
T Consensus       227 ~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~-~~~~s~~e~~~~i~~~~~~  288 (338)
T d1orra_         227 TISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTI-VNSLSLLELFKLLEDYCNI  288 (338)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCG-GGEEEHHHHHHHHHHHHTC
T ss_pred             EEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccc-cccccHHHHHHHHHHHHCC
Confidence            3433   33789999999999999998754 567899995421 5678999999999998763

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.94  E-value=2.9e-26  Score=201.22  Aligned_cols=213  Identities=17%  Similarity=0.141  Sum_probs=161.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~  160 (331)
                      |||||||||||||++|+++|.++  ||+|++++|++              +|+.|.+.+.++++  ++|+|+|+++....
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~--------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQD--------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechh--------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            67999999999999999999999  99999999863              58999999999997  67999999986432


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--CC----CCCCcchHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--PL----NSLGNGNILVWKR  234 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~~----~~~~~~~y~~sK~  234 (331)
                      .             ............|+.....+.++++..+. .+++.||..++....  +.    ...+...|..+|.
T Consensus        66 ~-------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~  131 (281)
T d1vl0a_          66 D-------------KCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKL  131 (281)
T ss_dssp             H-------------HHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHH
T ss_pred             c-------------cccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhh
Confidence            1             11111122225667777788887777664 666667664322211  11    1122367999999


Q ss_pred             HHHHHHHhcCCCEEEEecCcccCCCcchh-----hhhccCCccc-cCCcccccCHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          235 KAEQYLADSGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDEL-LQTETRTIARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       235 ~~e~~~~~~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      ..|+++++.+.+++++||+++||+..++.     ....+....+ .+..+++++++|+++++..++++...  .+||+++
T Consensus       132 ~~e~~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~--g~~~~~~  209 (281)
T d1vl0a_         132 EGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNY--GTFHCTC  209 (281)
T ss_dssp             HHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCC--EEEECCC
T ss_pred             HHHHHHHHhCCCccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhccc--CceeEeC
Confidence            99999999999999999999999987642     2222333332 34557899999999999999987643  4899999


Q ss_pred             CCCCCCCCHHHHHHHHHHhhcc
Q 046297          309 KPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       309 ~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                         ++.+|+.|+++.+.+.+|+
T Consensus       210 ---~~~~s~~e~~~~i~~~~g~  228 (281)
T d1vl0a_         210 ---KGICSWYDFAVEIFRLTGI  228 (281)
T ss_dssp             ---BSCEEHHHHHHHHHHHHCC
T ss_pred             ---CCccchHHHHHHHHHHhCC
Confidence               8999999999999999875

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=2.8e-26  Score=193.56  Aligned_cols=195  Identities=19%  Similarity=0.162  Sum_probs=138.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh-cCCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI-QGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l-~~~d~Vi~~ag~~  158 (331)
                      .|+|||||||||||++|+++|+++  |+  +|+++.|++...      ...+..+..|..++.+.+ ..+|+|||++|..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~--~~~~~v~~~~r~~~~~------~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALAE------HPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCCC------CTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEEEeCCchhh------cccccccccchhhhhhccccchheeeeeeeee
Confidence            589999999999999999999999  77  677777764321      122344444444443343 3689999999863


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQ  238 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~  238 (331)
                      ...               ........+.|+.++.+++++|++.++++|+++|+.+++...       .+.|..+|+.+|+
T Consensus        74 ~~~---------------~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~-------~~~y~~~K~~~E~  131 (212)
T d2a35a1          74 IKE---------------AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS-------SIFYNRVKGELEQ  131 (212)
T ss_dssp             HHH---------------HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-------SSHHHHHHHHHHH
T ss_pred             ccc---------------cccccccccchhhhhhhccccccccccccccccccccccccc-------ccchhHHHHHHhh
Confidence            211               011122337889999999999999999999999998874322       1569999999999


Q ss_pred             HHHhcCCC-EEEEecCcccCCCcchh--hhhccCCccccCCcccccCHHHHHHHHHHHhcCcccCCceEEecc
Q 046297          239 YLADSGIP-YTIIRAGGLQDKEGGIR--ELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       239 ~~~~~~~~-~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      ++++.+++ |+|+||+.+||+.....  ..+......+....+++||++|+|++++.+++++.. | .+.+.+
T Consensus       132 ~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~-g-~~~~~~  202 (212)
T d2a35a1         132 ALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGK-G-VRFVES  202 (212)
T ss_dssp             HHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCS-E-EEEEEH
T ss_pred             hccccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCC-C-CEEEEH
Confidence            99998875 99999999999876532  222222222233456779999999999999987753 3 344444

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.93  E-value=5e-25  Score=199.81  Aligned_cols=216  Identities=21%  Similarity=0.178  Sum_probs=165.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh--hc--CCCCcEEEccCCCcc-cHHHHhcCCCEEEEcc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ--KI--GGADDLFIGDIRDSN-SIIPAIQGIDALIILT  155 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~--~l--~~~~~~v~~Dl~d~~-~~~~~l~~~d~Vi~~a  155 (331)
                      ++|+|+|||||||||++|+++|+++  ||+|++++|++++..  .+  .++++++++|+.|.. .+..++.++|+++++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~   79 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT   79 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeec
Confidence            4688999999999999999999999  999999999876543  22  346899999999865 4677889999999886


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHH
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRK  235 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~  235 (331)
                      ....                         ..++..+.+++++|+++|++++++.||........+..   ..+|..+|..
T Consensus        80 ~~~~-------------------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~---~~~~~~~k~~  131 (350)
T d1xgka_          80 TSQA-------------------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWP---AVPMWAPKFT  131 (350)
T ss_dssp             CSTT-------------------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCC---CCTTTHHHHH
T ss_pred             cccc-------------------------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCCccc---chhhhhhHHH
Confidence            5311                         34788899999999999999988888876533333222   2346788999


Q ss_pred             HHHHHHhcCCCEEEEecCcccCCCcchhh-------hhccCCc-c---ccCCcccccCH-HHHHHHHHHHhcCc--ccCC
Q 046297          236 AEQYLADSGIPYTIIRAGGLQDKEGGIRE-------LLVGKDD-E---LLQTETRTIAR-ADVAEVCIQALQFE--EAKF  301 (331)
Q Consensus       236 ~e~~~~~~~~~~~ilrp~~v~g~~~~~~~-------~~~~~~~-~---~~~~~~~~i~v-~Dva~~~~~~l~~~--~~~~  301 (331)
                      .++++++.+++++++||+.++++......       ...+... .   ..+...+++++ +|+++++..++.++  ...|
T Consensus       132 ~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G  211 (350)
T d1xgka_         132 VENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG  211 (350)
T ss_dssp             HHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred             HHHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCC
Confidence            99999999999999999998875432110       0011100 0   12345677875 89999999999764  3578


Q ss_pred             ceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          302 KAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       302 ~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      ++|++++    +.+|+.|+++++++++|+
T Consensus       212 ~~~~~~g----~~~T~~eia~~l~~~~G~  236 (350)
T d1xgka_         212 HRIALTF----ETLSPVQVCAAFSRALNR  236 (350)
T ss_dssp             CEEEECS----EEECHHHHHHHHHHHHTS
T ss_pred             eEEEEeC----CcCCHHHHHHHHHHHHCC
Confidence            8999986    459999999999999986

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.92  E-value=1.9e-25  Score=202.67  Aligned_cols=232  Identities=16%  Similarity=0.159  Sum_probs=164.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh------cCCCCcEEEccCCCcccHHHHhc--CCCEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK------IGGADDLFIGDIRDSNSIIPAIQ--GIDALI  152 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~------l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi  152 (331)
                      .+||||||||+||||++|++.|+++  ||+|++++|+..+...      ..+.++++.+|++|++.+.++++  .+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            3689999999999999999999999  9999999998754332      23469999999999999999887  679999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCCC---------CCCCCC
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGTN---------LNHPLN  222 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~~---------~~~~~~  222 (331)
                      |+|+.....      ....+|+..+       ++|+.++.++++++++.+.+ .+++.|+...+.         +..+..
T Consensus        85 ~~aa~~~~~------~~~~~~~~~~-------~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          85 HMAAQPLVR------LSYSEPVETY-------STNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             ECCSCCCHH------HHHHCHHHHH-------HHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhcccccc------ccccCCcccc-------ccccccchhhhhhhhccccccccccccccccccccccccccccccccC
Confidence            999863321      1122333333       88999999999999987655 455544443211         111221


Q ss_pred             CCCcchHHHHHHHHHHHHH-------------hcCCCEEEEecCcccCCCcc--------hhhhhccCCcccc---CCcc
Q 046297          223 SLGNGNILVWKRKAEQYLA-------------DSGIPYTIIRAGGLQDKEGG--------IRELLVGKDDELL---QTET  278 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------------~~~~~~~ilrp~~v~g~~~~--------~~~~~~~~~~~~~---~~~~  278 (331)
                        +.+.|+.+|...|..++             ..++.++++||+++||+...        +.....+....+.   ...+
T Consensus       152 --p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  229 (356)
T d1rkxa_         152 --GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIR  229 (356)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEE
T ss_pred             --CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccc
Confidence              23679999998886654             35789999999999998753        1122223333222   3447


Q ss_pred             cccCHHHHHHHHHHHhcCcccC----CceEEeccCCCCCCCCHHHHHHHHHHhhcc
Q 046297          279 RTIARADVAEVCIQALQFEEAK----FKAFDLASKPEGTGTPTKDFKALFSQITTR  330 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~~~~----~~~~~i~~~~~~~~~t~~e~~~~~~~~~g~  330 (331)
                      +++|++|++++++.++..+...    +...+.... .+...++.++++.+.+..+.
T Consensus       230 ~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~  284 (356)
T d1rkxa_         230 PWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN-DADATPVKNIVEQMVKYWGE  284 (356)
T ss_dssp             CCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC-GGGCEEHHHHHHHHHHHHCT
T ss_pred             cccccccccchhhhhhhhhcccccccccccccccc-cccccccchhhhhhHHHhCC
Confidence            8899999999999988765322    223333321 15678999999999888763

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.90  E-value=5.2e-24  Score=187.87  Aligned_cols=217  Identities=16%  Similarity=0.133  Sum_probs=154.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~  160 (331)
                      ||||||||+||||++|++.|.++  |+.| .+++....          +.+|+.|.+.+.++++  ++|+|||+||....
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~--g~~v-~~~~~~~~----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPV--GNLI-ALDVHSKE----------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTT--SEEE-EECTTCSS----------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC--CCEE-EEECCCcc----------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            68999999999999999999998  8755 45544321          3479999999999997  56999999986432


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCC--C----CCCCCcchHHHHHH
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNH--P----LNSLGNGNILVWKR  234 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~--~----~~~~~~~~y~~sK~  234 (331)
                      .      ....+|...+       +.|+.++.++++++++.++ +++++||...+....  |    ....+.+.|+.+|.
T Consensus        68 ~------~~~~~~~~~~-------~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~  133 (298)
T d1n2sa_          68 D------KAESEPELAQ-------LLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKL  133 (298)
T ss_dssp             H------HHTTCHHHHH-------HHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHH
T ss_pred             c------ccccCccccc-------cccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhh
Confidence            1      1123344444       7899999999999998886 577777775432211  1    11223367999999


Q ss_pred             HHHHHHHhcCCCEEEEecCcccCCCc-ch----hhhhccC-Ccccc-CCcccccCHHHHHHHHHHHhcC---cccCCceE
Q 046297          235 KAEQYLADSGIPYTIIRAGGLQDKEG-GI----RELLVGK-DDELL-QTETRTIARADVAEVCIQALQF---EEAKFKAF  304 (331)
Q Consensus       235 ~~e~~~~~~~~~~~ilrp~~v~g~~~-~~----~~~~~~~-~~~~~-~~~~~~i~v~Dva~~~~~~l~~---~~~~~~~~  304 (331)
                      .+|++++.......++|++..++..+ ..    ...+... ...+. +...+++++.|+++++..++..   ....+.+|
T Consensus       134 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~  213 (298)
T d1n2sa_         134 AGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLY  213 (298)
T ss_dssp             HHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEE
T ss_pred             hhhhhHHhhhcccccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccc
Confidence            99999998878888888877665433 21    1222222 22222 3346779999999999887753   23446799


Q ss_pred             EeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          305 DLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       305 ~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      |+++   ++..+..++++++.+..+
T Consensus       214 n~~~---~~~~~~~~~~~~i~~~~~  235 (298)
T d1n2sa_         214 HLVA---GGTTTWHDYAALVFDEAR  235 (298)
T ss_dssp             ECCC---BSCEEHHHHHHHHHHHHH
T ss_pred             cccC---CCceecHHHHHHHHhhhh
Confidence            9999   889999999999887654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=9.6e-23  Score=180.24  Aligned_cols=220  Identities=13%  Similarity=0.091  Sum_probs=141.6

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCch--hhhcCCCCcEEEccCCCcccH-HHH-----hcCCCEEEEcc
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEES--KQKIGGADDLFIGDIRDSNSI-IPA-----IQGIDALIILT  155 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~--~~~l~~~~~~v~~Dl~d~~~~-~~~-----l~~~d~Vi~~a  155 (331)
                      ||||||+||||++|++.|+++  |+ +|+++++-...  ...+..   ....|..+.+++ ...     +..+++|+|+|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~--g~~~V~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVD---LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHHT---SCCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhC--CCCeEEEEECCCCcchhhcccc---cchhhhccchHHHHHHhhhhcccchhhhhhhc
Confidence            899999999999999999999  86 78888643222  111211   111222222222 222     23689999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCC-----CCCCCcchHH
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHP-----LNSLGNGNIL  230 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~-----~~~~~~~~y~  230 (331)
                      +.....        ..+++..       .+.++.++.++++++++.+++.+++.|+........+     ....+.+.|+
T Consensus        77 a~~~~~--------~~~~~~~-------~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~  141 (307)
T d1eq2a_          77 ACSSTT--------EWDGKYM-------MDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYG  141 (307)
T ss_dssp             SCCCTT--------CCCHHHH-------HHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHH
T ss_pred             cccccc--------ccccccc-------cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            753321        1122222       2678999999999999999975555444432222111     1112337799


Q ss_pred             HHHHHHHHHHH----hcCCCEEEEecCcccCCCcch------------hhhhccCCcccc-C---CcccccCHHHHHHHH
Q 046297          231 VWKRKAEQYLA----DSGIPYTIIRAGGLQDKEGGI------------RELLVGKDDELL-Q---TETRTIARADVAEVC  290 (331)
Q Consensus       231 ~sK~~~e~~~~----~~~~~~~ilrp~~v~g~~~~~------------~~~~~~~~~~~~-~---~~~~~i~v~Dva~~~  290 (331)
                      .+|..+|.+++    +++++++++||+++|||....            ..+..++...+. +   ..++++|++|+++++
T Consensus       142 ~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~  221 (307)
T d1eq2a_         142 YSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN  221 (307)
T ss_dssp             HHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHH
T ss_pred             cccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHH
Confidence            99999998877    478999999999999986531            122223333332 1   237899999999999


Q ss_pred             HHHhcCcccCCceEEeccCCCCCCCCHHHHHHHHHHhhc
Q 046297          291 IQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITT  329 (331)
Q Consensus       291 ~~~l~~~~~~~~~~~i~~~~~~~~~t~~e~~~~~~~~~g  329 (331)
                      ..++.++.  ...||+++   ++..++.|+++++.+..+
T Consensus       222 ~~~~~~~~--~~~~~~~~---~~~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         222 LWFLENGV--SGIFNLGT---GRAESFQAVADATLAYHK  255 (307)
T ss_dssp             HHHHHHCC--CEEEEESC---SCCBCHHHHHHHC-----
T ss_pred             HHHhhhcc--cccccccc---ccchhHHHHHHHHHHhcC
Confidence            99988763  45899999   999999999999977654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=4.9e-22  Score=170.49  Aligned_cols=207  Identities=14%  Similarity=0.069  Sum_probs=152.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|++++.++    +.....++++|++|+++++++++       ++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            4789999999999999999999999  9999999999877654    34457889999999999887775       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      ++|||||.....  .+...+.++|+..       +++|+.++..+.+.    +++.+-.+||++||..+......     
T Consensus        83 ilinnAG~~~~~--~~~~~~~~~~~~~-------~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~-----  148 (244)
T d1nffa_          83 VLVNNAGILNIG--TIEDYALTEWQRI-------LDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA-----  148 (244)
T ss_dssp             EEEECCCCCCCB--CTTTSCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----
T ss_pred             EEEECCcccCCC--chhhCCHHHHhHH-------hhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccc-----
Confidence            999999975432  2223333334443       48898887666654    45556679999999987543222     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      ...|..+|+..+.+.+       .+|++++.|.||++..+...   .+.......+-  ..+..++|+|++++.++.+..
T Consensus       149 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~---~~~~~~~~~pl--~R~~~p~diA~~v~fL~s~~s  223 (244)
T d1nffa_         149 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD---WVPEDIFQTAL--GRAAEPVEVSNLVVYLASDES  223 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT---TSCTTCSCCSS--SSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHh---hhhHHHHhccc--cCCCCHHHHHHHHHHHhChhh
Confidence            2569999999887765       47899999999999776421   11111111221  235789999999999987543


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..|+++.+.+
T Consensus       224 ~~itG~~i~vDG  235 (244)
T d1nffa_         224 SYSTGAEFVVDG  235 (244)
T ss_dssp             TTCCSCEEEEST
T ss_pred             CCCcCCEEEECC
Confidence              4688999986

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.87  E-value=1.2e-21  Score=168.63  Aligned_cols=212  Identities=12%  Similarity=0.048  Sum_probs=146.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-----hhcCCCCcEEEccCCCcccHHHHhc-------C
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-----QKIGGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-----~~l~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      .++|++|||||+++||+.+++.|+++  |++|++++|++.+.     +....++..+++|++|++++.++++       +
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999  99999999987542     2234568899999999999888764       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|++|||||.....  .+...+.++|+..+       ++|+.+...+.++    +++.+-.++|++||..+..+...   
T Consensus        81 iDilVnnAG~~~~~--~~~~~~~e~~~~~~-------~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---  148 (247)
T d2ew8a1          81 CDILVNNAGIYPLI--PFDELTFEQWKKTF-------EINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA---  148 (247)
T ss_dssp             CCEEEECCCCCCCC--CGGGCCHHHHHHHH-------HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS---
T ss_pred             CCEEEECCCCCCCC--ChHhCCHHHhhhhh-------eeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcc---
Confidence            99999999975432  22233333444443       8898886665554    56666679999999876443321   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc---CCcccccCHHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL---QTETRTIARADVAEVCIQA  293 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~---~~~~~~i~v~Dva~~~~~~  293 (331)
                        ...|..+|...+.+.+       .+|++++.|.||++..+....... ........   ..-..+..++|+|++++.+
T Consensus       149 --~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~~l~r~~~pedvA~~v~fL  225 (247)
T d2ew8a1         149 --YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL-SAMFDVLPNMLQAIPRLQVPLDLTGAAAFL  225 (247)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTTSSSCSCCCTHHHHHHHHHH
T ss_pred             --cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc-chhHHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence              2569999999887655       478999999999997664221000 00000000   0011356789999999998


Q ss_pred             hcCcc--cCCceEEecc
Q 046297          294 LQFEE--AKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~--~~~~~~~i~~  308 (331)
                      +.+..  ..|+++.+.+
T Consensus       226 ~S~~s~~itG~~i~vDG  242 (247)
T d2ew8a1         226 ASDDASFITGQTLAVDG  242 (247)
T ss_dssp             TSGGGTTCCSCEEEESS
T ss_pred             hCchhcCCcCCeEEECC
Confidence            87554  4788999987

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=3.7e-22  Score=170.64  Aligned_cols=207  Identities=13%  Similarity=0.077  Sum_probs=146.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      -++|++|||||+++||++++++|+++  |++|++++|+.+..+    ++..+++|++|+++++++++       ++|++|
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPK----GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCT----TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcchhc----CceEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            45789999999999999999999999  999999999876543    36789999999999888775       689999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHH----HHHHHcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQI----DAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||||.....  .+...+.++|+..       +++|+.+...+.    ..+++.+-.+||++||..+.....     ....
T Consensus        79 nnAG~~~~~--~~~~~~~e~~~~~-------~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-----~~~~  144 (237)
T d1uzma1          79 SNAGLSADA--FLMRMTEEKFEKV-------INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG-----NQAN  144 (237)
T ss_dssp             EECSCCC-------CCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------CCHH
T ss_pred             eeecccccc--cHhhCCHHHHHHH-------HHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc-----ccHH
Confidence            999975432  2223333333333       488988865554    455667777999999988754322     1256


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc-
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE-  298 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-  298 (331)
                      |..+|..++.+.+       .+|++++.|.||++..+....  ..........+|-  ..+..++|+|++++.++.+.. 
T Consensus       145 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl--~R~~~pedvA~~v~fL~S~~s~  222 (237)
T d1uzma1         145 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA--KRVGTPAEVAGVVSFLASEDAS  222 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTT--CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhCchhc
Confidence            9999999887765       478999999999997653210  0000011111121  235689999999999887653 


Q ss_pred             -cCCceEEecc
Q 046297          299 -AKFKAFDLAS  308 (331)
Q Consensus       299 -~~~~~~~i~~  308 (331)
                       ..|+++.+.+
T Consensus       223 ~itG~~i~vdG  233 (237)
T d1uzma1         223 YISGAVIPVDG  233 (237)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCcCCeEEECC
Confidence             4688999886

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.87  E-value=1.3e-21  Score=170.63  Aligned_cols=216  Identities=11%  Similarity=0.038  Sum_probs=151.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C--CCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G--GADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~--~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      .++|++|||||+++||+.++++|+++  |++|++++|++++.+++    .  ..+.++.+|++|+++++++++       
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999  99999999998765543    2  236788999999999988875       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|++|||||........+.....++++.       .+++|+.+...+.+++    ++.+-.++|++||..+.....+..
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~-------~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~  154 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKR-------VMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVS  154 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSC
T ss_pred             CcceeccccccccCCCcccccCcHHHHHH-------HHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccc
Confidence            68999999997554322122222223333       3488888876666554    455666899999987654433321


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-----hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-----RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ..|..+|..++.+.+       .+|++++.|.||++..+...-     .............-...+..++|+|+++
T Consensus       155 ----~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v  230 (268)
T d2bgka1         155 ----HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV  230 (268)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred             ----cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHH
Confidence                358999999887765       478999999999997764210     0000000000000112357899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.+..  ..|+++.+.+
T Consensus       231 ~fL~S~~s~~itGq~i~VDG  250 (268)
T d2bgka1         231 AYLAGDESKYVSGLNLVIDG  250 (268)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhChhhCCccCceEEECc
Confidence            99987653  4689999987

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=5.7e-22  Score=170.62  Aligned_cols=212  Identities=15%  Similarity=0.061  Sum_probs=149.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-------CCCEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-------GIDALI  152 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-------~~d~Vi  152 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|+++..+.... +..++++|++|+++++++++       ++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            4789999999999999999999999  9999999999766443222 46789999999998887775       689999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcch
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNGN  228 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~  228 (331)
                      ||||.....  .+...+.++++.       .+++|+.++..+.+++    ++.+-.+||++||..+..+...     ...
T Consensus        82 nnAG~~~~~--~~~~~~~e~~~~-------~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~-----~~~  147 (248)
T d2d1ya1          82 NNAAIAAPG--SALTVRLPEWRR-------VLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE-----NAA  147 (248)
T ss_dssp             ECCCCCCCB--CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT-----BHH
T ss_pred             EeCcCCCCC--ChhhCCHHHHHH-------HHHhhhhhHhhhhhhhcccccccccccccccccccccccccc-----cch
Confidence            999975432  122223333333       3488988877666655    4555669999999987543322     256


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc-----CC-cccccCHHHHHHHHHHHhc
Q 046297          229 ILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL-----QT-ETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       229 y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-----~~-~~~~i~v~Dva~~~~~~l~  295 (331)
                      |..+|..++.+.+       .+|++++.|.||++-.+................     .. -..+..++|+|++++.++.
T Consensus       148 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S  227 (248)
T d2d1ya1         148 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999887665       478999999999987653210000000000000     00 1235689999999999987


Q ss_pred             Ccc--cCCceEEecc
Q 046297          296 FEE--AKFKAFDLAS  308 (331)
Q Consensus       296 ~~~--~~~~~~~i~~  308 (331)
                      +..  ..|+++.+.+
T Consensus       228 ~~s~~itG~~i~vDG  242 (248)
T d2d1ya1         228 EKASFITGAILPVDG  242 (248)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             chhcCCCCcEEEcCc
Confidence            553  4788999987

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.5e-22  Score=172.43  Aligned_cols=210  Identities=17%  Similarity=0.135  Sum_probs=150.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      ++|+++||||+++||+++++.|+++  |++|++++|++++++++    ..+...+.+|++|+++++++++       ++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence            5789999999999999999999999  99999999998776543    4457889999999998887775       699


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      ++|||||.....  .+.....++++       ..+++|+.+...+.+++    ++.+-.+||++||..+..+...     
T Consensus        81 ilVnnAg~~~~~--~~~~~~~~~~~-------~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~-----  146 (243)
T d1q7ba_          81 ILVNNAGITRDN--LLMRMKDEEWN-------DIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG-----  146 (243)
T ss_dssp             EEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-----
T ss_pred             eehhhhhhcccc--ccccccccccc-------cccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCC-----
Confidence            999999875432  12222223333       33488988876666554    5556679999999876443221     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccCCccccCCcccccCHHHHHHHHHHHhcC
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGKDDELLQTETRTIARADVAEVCIQALQF  296 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  296 (331)
                      ...|..+|..++.+.+       .+|++++.|.||++-.+...  ............|-  ..+..++|+|++++.++.+
T Consensus       147 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl--~R~~~pedvA~~v~fL~S~  224 (243)
T d1q7ba_         147 QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPA--GRLGGAQEIANAVAFLASD  224 (243)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTT--SSCBCHHHHHHHHHHHHSG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCC--CCCCCHHHHHHHHHHHhCc
Confidence            2569999999887765       47899999999998764311  00000000011111  2356899999999999876


Q ss_pred             cc--cCCceEEecc
Q 046297          297 EE--AKFKAFDLAS  308 (331)
Q Consensus       297 ~~--~~~~~~~i~~  308 (331)
                      ..  ..|+++.+.+
T Consensus       225 ~s~~itGq~i~vdG  238 (243)
T d1q7ba_         225 EAAYITGETLHVNG  238 (243)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             hhcCCcCCeEEECC
Confidence            54  4788999987

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.86  E-value=1.5e-21  Score=169.01  Aligned_cols=214  Identities=15%  Similarity=0.076  Sum_probs=153.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|+++++++    +..++..+++|++|++++.++++       ++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVRE--GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHT--TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            4688999999999999999999999  9999999999876554    44568889999999999988875       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHc-CCCeEEEEccCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAA-GAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~-~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      ++|||||.....  .+...+.++++..       +++|+.++..+.+++    .+. +-.+||++||..+..+...    
T Consensus        82 ilVnnAg~~~~~--~~~~~~~~~~~~~-------~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~----  148 (256)
T d1k2wa_          82 ILVNNAALFDLA--PIVEITRESYDRL-------FAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL----  148 (256)
T ss_dssp             EEEECCCCCCCC--CGGGCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT----
T ss_pred             EEEeeccccccc--ccccCCHHHHHhh-------hceeeeccccchhhccchhHHhccCCccccccchhhcccccc----
Confidence            999999975432  1222233333333       388988877776653    222 3468999999887543322    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-hhh---ccCCc---------cccCCcccccCHH
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-ELL---VGKDD---------ELLQTETRTIARA  284 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-~~~---~~~~~---------~~~~~~~~~i~v~  284 (331)
                       ...|..+|..++.+.+       .+|++++.|.||++-.+..... ...   .+...         .+|-  ..+..++
T Consensus       149 -~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--gR~~~p~  225 (256)
T d1k2wa_         149 -VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF--GRMGRAE  225 (256)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT--SSCBCHH
T ss_pred             -ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCC--CCCcCHH
Confidence             2569999999887765       4789999999999987753210 000   00000         0111  2356899


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEeccCCCCCCC
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLASKPEGTGT  315 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~~~~~~~~  315 (331)
                      |+|.+++.++.+..  ..|+++.+.+   |...
T Consensus       226 evA~~v~fL~S~~a~~iTG~~i~vDG---G~~m  255 (256)
T d1k2wa_         226 DLTGMAIFLATPEADYIVAQTYNVDG---GNWM  255 (256)
T ss_dssp             HHHHHHHHTTSGGGTTCCSCEEEEST---TSSC
T ss_pred             HHHHHHHHHhCchhCCccCceEEECc---chhh
Confidence            99999999886543  4688999987   6543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.86  E-value=1.2e-21  Score=169.08  Aligned_cols=211  Identities=17%  Similarity=0.116  Sum_probs=149.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .++|++|||||+++||+++++.|+++  |++|++++|++++++++       ..++..+++|++|++++.++++      
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999  99999999998765432       2357889999999999888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|++|||||......  +.....++++       ..+++|+.+...+.+    .+++.+-.+||++||..+..+... 
T Consensus        86 g~iDilvnnag~~~~~~--~~~~~~~~~~-------~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~-  155 (251)
T d2c07a1          86 KNVDILVNNAGITRDNL--FLRMKNDEWE-------DVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG-  155 (251)
T ss_dssp             SCCCEEEECCCCCCCCC--TTTCCHHHHH-------HHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-
T ss_pred             CCceeeeeccccccccc--cccccHHHHh-------hhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCC-
Confidence             6899999999754421  1222223333       334888888665555    455666679999999876433221 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                          ...|..+|..++.+.+       .+|++++.|.||++..+...  ...........+|-  ..+..++|+|++++.
T Consensus       156 ----~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl--~R~~~pedvA~~v~f  229 (251)
T d2c07a1         156 ----QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA--GRMGTPEEVANLACF  229 (251)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTT--SSCBCHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCC--CCCcCHHHHHHHHHH
Confidence                2569999999887765       47899999999999876432  11111111111121  135689999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++.+..  ..|+++.+.+
T Consensus       230 L~S~~s~~itG~~i~vDG  247 (251)
T d2c07a1         230 LSSDKSGYINGRVFVIDG  247 (251)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCchhCCCcCcEEEECC
Confidence            887654  4688999886

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=1.4e-21  Score=167.64  Aligned_cols=209  Identities=15%  Similarity=0.053  Sum_probs=148.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhc-------CCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQ-------GIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~-------~~d~V  151 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|+++++++..+  +.+++.+|++|+++++++++       ++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            4789999999999999999999999  9999999999887766533  47889999999999988774       68999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----HcCCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AAGAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      |||||.....  .+...+.++++.       .+++|+.+...+.+++.    +.+-..++.+||.+. ....     ...
T Consensus        82 VnnAG~~~~~--~~~~~~~~~~~~-------~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~-~~~~-----~~~  146 (242)
T d1ulsa_          82 VHYAGITRDN--FHWKMPLEDWEL-------VLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY-LGNL-----GQA  146 (242)
T ss_dssp             EECCCCCCCC--CGGGCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG-GCCT-----TCH
T ss_pred             EECCcccccC--chhhCcchhhhc-------cccccchhhhhhhhhccccccccccceeeeeccccc-cCCC-----CCc
Confidence            9999975432  122222333333       34899999777766654    345556777777542 2211     125


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-h-hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-I-RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      .|..+|...+.+.+       .+|++++.|.||++..+... . ...........|-  ..+..++|+|++++.++.+..
T Consensus       147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl--~R~~~pedia~~v~fL~S~~s  224 (242)
T d1ulsa_         147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL--GRAGKPLEVAYAALFLLSDES  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT--CSCBCHHHHHHHHHHHHSGGG
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCC--CCCCCHHHHHHHHHHHhchhh
Confidence            69999999887765       47899999999999776432 1 0000000011111  234689999999999987653


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..|+++.+.+
T Consensus       225 ~~itG~~i~vDG  236 (242)
T d1ulsa_         225 SFITGQVLFVDG  236 (242)
T ss_dssp             TTCCSCEEEEST
T ss_pred             CCCCCcEEEECC
Confidence              4788999987

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.86  E-value=1.5e-21  Score=168.45  Aligned_cols=211  Identities=13%  Similarity=0.055  Sum_probs=150.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      -++|++|||||++.||++++++|+++  |++|++++|++++.+++    ...+.++++|++|+++++++++       ++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            35789999999999999999999999  99999999998776543    3457899999999999988775       68


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |++|||||.....  .+.....++++       ..+++|+.+...+.+++    ++.+-.+||++||..+......    
T Consensus        81 DilVnnAg~~~~~--~~~~~~~~~~~-------~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~----  147 (254)
T d1hdca_          81 DGLVNNAGISTGM--FLETESVERFR-------KVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL----  147 (254)
T ss_dssp             CEEEECCCCCCCS--CGGGSCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             cEEEecCcccccc--ccccccccccc-------hhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccc----
Confidence            9999999975432  11122222222       34488888876666554    5556679999999987543321    


Q ss_pred             CcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccc-cCCc--ccccCHHHHHHHHHHHh
Q 046297          225 GNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDEL-LQTE--TRTIARADVAEVCIQAL  294 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~-~~~~--~~~i~v~Dva~~~~~~l  294 (331)
                       ...|..+|..++.+.+       .+|+++..|.||++..+..  ........... ....  +-.+.++|||++++.++
T Consensus       148 -~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~--~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~  224 (254)
T d1hdca_         148 -TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT--AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL  224 (254)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred             -hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccc--hhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh
Confidence             2579999999887765       4789999999999976532  11111111111 1111  11135899999999998


Q ss_pred             cCcc--cCCceEEecc
Q 046297          295 QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~  308 (331)
                      .+..  ..|+++.+.+
T Consensus       225 S~~a~~itG~~i~vDG  240 (254)
T d1hdca_         225 SDTSSYVTGAELAVDG  240 (254)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             chhhCCCCCceEEeCC
Confidence            7553  5789999987

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=6.7e-22  Score=170.54  Aligned_cols=212  Identities=16%  Similarity=0.102  Sum_probs=149.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .++|++|||||+++||+++++.|+++  |++|++++|++++.++.        ..++.++++|++|++++.++++     
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999  99999999997665432        3357789999999999888775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||.....  .+...+.++++..       +++|+.+...+.+++    ++.+-.++|+++|..+.....+
T Consensus        81 ~g~iDiLVnnAG~~~~~--~~~~~~~e~~~~~-------~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~  151 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRH--PAEEFPLDEFRQV-------IEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP  151 (251)
T ss_dssp             HSCCCEEEECCCCCCCC--CGGGCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHHHHH-------HHhhhhhhhhhhhhhhhcccccccccccccccchhccccCc
Confidence              699999999974332  2222333333333       488988876666654    4556679999998754332222


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                          ....|..+|..++.+.+       .+|++++.|.||++-.+.....    .........+|-  ..+..++|+|++
T Consensus       152 ----~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl--~R~~~pedvA~~  225 (251)
T d1vl8a_         152 ----NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL--GRTGVPEDLKGV  225 (251)
T ss_dssp             ----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT--SSCBCGGGGHHH
T ss_pred             ----cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCC--CCCCCHHHHHHH
Confidence                12569999999887765       4789999999999987653210    000000011111  124688999999


Q ss_pred             HHHHhcCcc--cCCceEEecc
Q 046297          290 CIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       290 ~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ++.++.+..  ..|+++.+.+
T Consensus       226 v~fL~S~~a~~itG~~i~vDG  246 (251)
T d1vl8a_         226 AVFLASEEAKYVTGQIIFVDG  246 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCchhCCCcCcEEEeCc
Confidence            999887654  4688999886

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.86  E-value=2.6e-21  Score=167.51  Aligned_cols=211  Identities=13%  Similarity=0.087  Sum_probs=149.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---------CCCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---------GGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---------~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++|++|||||+++||+.++++|+++  |++|++++|+++++++.         ..++..+++|++|++++.++++     
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999  99999999998765432         1246788999999999888774     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||...... .+...+.++|+.       .+++|+.++..+.+++    ++.+-.+||++||..+..... 
T Consensus        81 ~G~iDiLVnnAG~~~~~~-~~~~~~~~~~~~-------~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-  151 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQN-PTESFTAAEFDK-------VVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG-  151 (258)
T ss_dssp             HSCCSEEEECCCCCCCCB-CGGGSCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS-
T ss_pred             hCCCCEEEECCcccccCC-chhhhhhhHHHH-------HhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC-
Confidence              6999999999754321 122222333333       3488988877766654    455667999999988754322 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-h-h--------hhhccCCccccCCcccccCH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-I-R--------ELLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~-~--------~~~~~~~~~~~~~~~~~i~v  283 (331)
                          ....|..+|..++.+.+       .+|++++.|.||++..+... . .        .........+|-  ..+..+
T Consensus       152 ----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl--~R~~~p  225 (258)
T d1iy8a_         152 ----NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS--KRYGEA  225 (258)
T ss_dssp             ----SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT--CSCBCH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC--CCCcCH
Confidence                12569999999887655       47899999999999765321 0 0        000000001111  235689


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+|++++.++.+..  ..|+++.+.+
T Consensus       226 ~dvA~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         226 PEIAAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCchhcCCcCceEEcCc
Confidence            999999999987543  4788999987

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.1e-22  Score=170.19  Aligned_cols=210  Identities=11%  Similarity=0.067  Sum_probs=148.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc-------CCCE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ-------GIDA  150 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~-------~~d~  150 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|++++++++.   ++..++.+|++|+++++++++       ++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4789999999999999999999999  999999999987766542   357889999999999888775       6899


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGN  226 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~  226 (331)
                      +|||||...... .+...+.++++       ..+++|+.++..+.+++    ++.+ .++|++||..+......     .
T Consensus        83 lVnnAG~~~~~~-~~~~~~~~~~~-------~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~-----~  148 (250)
T d1ydea1          83 VVNNAGHHPPPQ-RPEETSAQGFR-------QLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQ-----A  148 (250)
T ss_dssp             EEECCCCCCCCC-CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTT-----C
T ss_pred             EEeccccccccc-ccccccHHHHH-------HHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccC-----c
Confidence            999999643321 11122222233       33488988876666554    4444 69999999876433221     2


Q ss_pred             chHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--------hhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          227 GNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--------RELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       227 ~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                      ..|..+|..++.+.+       .+|++++.|.||++..+....        ...+.......|  -..+..++|+|++++
T Consensus       149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p--l~R~g~p~eva~~v~  226 (250)
T d1ydea1         149 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP--LGRMGQPAEVGAAAV  226 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST--TSSCBCHHHHHHHHH
T ss_pred             chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCC--CCCCCCHHHHHHHHH
Confidence            579999999887765       478999999999996542110        000000000111  123578999999999


Q ss_pred             HHhcCcc-cCCceEEecc
Q 046297          292 QALQFEE-AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~-~~~~~~~i~~  308 (331)
                      .++.+.. ..|+++.+.+
T Consensus       227 fL~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         227 FLASEANFCTGIELLVTG  244 (250)
T ss_dssp             HHHHHCTTCCSCEEEEST
T ss_pred             HHhCccCCCcCCeEEECC
Confidence            9886433 4788899987

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.8e-21  Score=165.95  Aligned_cols=210  Identities=13%  Similarity=0.025  Sum_probs=150.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhc---CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQ---GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~  154 (331)
                      ++|++|||||+++||++++++|+++  |++|++++|++++++++.   +.+..+.+|++|++.++++++   ++|++|||
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            5789999999999999999999999  999999999988766542   357889999999999998886   68999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH-----HcCCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK-----AAGAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~-----~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      ||.....  .+...+.++++..       +++|+.++..+.+++.     +.+-.++|++||..+......     ...|
T Consensus        84 Ag~~~~~--~~~~~~~~~~~~~-------~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~-----~~~Y  149 (244)
T d1pr9a_          84 AAVALLQ--PFLEVTKEAFDRS-------FEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN-----HSVY  149 (244)
T ss_dssp             CCCCCCB--CGGGCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-----BHHH
T ss_pred             ccccccc--chhhhhHHHHHHH-------HHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc-----hhhh
Confidence            9975432  1222223333333       3888888766655442     334568999999876443222     2569


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          230 LVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       230 ~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      ..+|...+.+.+       ..|++++.|.||++..+....    ..........+|-  ..+..++|+|++++.++.+..
T Consensus       150 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl--~R~~~peevA~~v~fL~S~~a  227 (244)
T d1pr9a_         150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL--GKFAEVEHVVNAILFLLSDRS  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT--CSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhCchh
Confidence            999999887665       468999999999997653110    0000000011111  235789999999999887654


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..|+++.+.+
T Consensus       228 ~~itG~~i~vDG  239 (244)
T d1pr9a_         228 GMTTGSTLPVEG  239 (244)
T ss_dssp             TTCCSCEEEEST
T ss_pred             CCcCCcEEEECc
Confidence              5788888886

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.85  E-value=6.4e-21  Score=164.40  Aligned_cols=210  Identities=14%  Similarity=0.077  Sum_probs=148.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|+++..+++      ..++.++++|++|++++.++++       +
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999  99999999998765542      2357889999999998887775       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCC-eEEEEccCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAK-QIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk-~~v~~SS~~~~~~~~~~~  222 (331)
                      +|++|||||.....  .+...+.++++..       +++|+.++..+.+++    ++.+-. ++|++||..+......  
T Consensus        83 iDiLVnnAg~~~~~--~~~~~~~~~~~~~-------~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~--  151 (251)
T d1zk4a1          83 VSTLVNNAGIAVNK--SVEETTTAEWRKL-------LAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--  151 (251)
T ss_dssp             CCEEEECCCCCCCC--CTTTCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT--
T ss_pred             ceEEEecccccccc--chhcccccchhhh-------ccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC--
Confidence            89999999975432  2223333333333       488999877776665    444544 7899999877543221  


Q ss_pred             CCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcc---hhhhhccCCccccCCcccccCHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGG---IRELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~---~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                         ...|..+|..++.+.+         ++|++++.|.||++..+...   ............|-  ..+..++|+|+++
T Consensus       152 ---~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl--~R~~~pedvA~~v  226 (251)
T d1zk4a1         152 ---LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM--GHIGEPNDIAYIC  226 (251)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTT--SSCBCHHHHHHHH
T ss_pred             ---chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCC--CCCcCHHHHHHHH
Confidence               2569999988765433         46899999999999764311   01111111111221  1356899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.+..  ..|+++.+.+
T Consensus       227 ~fL~S~~s~~itG~~i~vDG  246 (251)
T d1zk4a1         227 VYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhCCCcCcEEEECc
Confidence            99887554  4688898886

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.85  E-value=7e-21  Score=165.12  Aligned_cols=210  Identities=11%  Similarity=0.028  Sum_probs=146.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc-hhhh--------cCCCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE-SKQK--------IGGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~-~~~~--------l~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++|++|||||+++||++++++|+++  |++|++++|++. ..++        ...++.++++|++|++++.++++     
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4788999999999999999999999  999999999753 2222        12357788999999999988875     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||.....  .+...+.++++       ..+++|+.+...+.+    .+++.+-.++|++||..+......
T Consensus        81 ~G~iDiLVnnAG~~~~~--~~~~~~~~~~~-------~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~  151 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTA--LIEDFPTEKWD-------AILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN  151 (260)
T ss_dssp             HSCCSEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             hCCCcEEEeecccccCC--chhhhhHHhhh-------hhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC
Confidence              689999999975432  12222223333       334888888665554    456666679999999987543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccC----C--------ccccCCccc
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGK----D--------DELLQTETR  279 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~----~--------~~~~~~~~~  279 (331)
                           ...|..+|...+.+.+       .+|++++.|.||++-.+...  ........    .        ..+|-  ..
T Consensus       152 -----~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--~R  224 (260)
T d1x1ta1         152 -----KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS--LQ  224 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT--CC
T ss_pred             -----cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC--CC
Confidence                 2569999999887665       47899999999999766421  00000000    0        00111  23


Q ss_pred             ccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          280 TIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +..++|+|++++.++.+..  ..|+++.+.+
T Consensus       225 ~g~pediA~~v~fL~S~~a~~itG~~i~vDG  255 (260)
T d1x1ta1         225 FVTPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhChhhCCCcCCEEEECc
Confidence            5689999999999987543  5688898886

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=6.5e-21  Score=165.05  Aligned_cols=211  Identities=14%  Similarity=0.051  Sum_probs=138.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .++|++|||||+++||++++++|+++  |++|++++|+++++++.       ..++..+.+|++|++++.++++      
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999  99999999998766542       2357889999999988877663      


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        .+|++|||||.....  .+...+.++++.       .+++|+.++..+.++    +++.+-.+||++||..+......
T Consensus        84 ~g~idilvnnAG~~~~~--~~~~~~~~~~~~-------~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~  154 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSK--PTLDYTAEDFSF-------HISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV  154 (259)
T ss_dssp             TTCCSEEEEECCC--------CCCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------
T ss_pred             CCCcccccccccccCCC--chhhCCHHHHHH-------HHHHHhhhheeeehhhhhcccccccccccccccccccccccc
Confidence              489999999975432  122223333333       348899887666655    45567779999999876443322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccC--Cc-ccccCHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQ--TE-TRTIARADVAEVC  290 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~--~~-~~~i~v~Dva~~~  290 (331)
                           ...|..+|..++.+.+       .+|+++++|.||++..+....  ...........  .+ ..+..++|+|.++
T Consensus       155 -----~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~--~~~~~~~~~~~~~~pl~R~~~pedvA~~v  227 (259)
T d1xq1a_         155 -----GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA--VYDDEFKKVVISRKPLGRFGEPEEVSSLV  227 (259)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHHH
T ss_pred             -----cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhh--hchHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence                 1469999999887665       478999999999997664211  11111001000  01 1246789999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.+..  ..|+++.+.+
T Consensus       228 ~fL~S~~s~~iTG~~i~vDG  247 (259)
T d1xq1a_         228 AFLCMPAASYITGQTICVDG  247 (259)
T ss_dssp             HHHTSGGGTTCCSCEEECCC
T ss_pred             HHHhCchhcCCcCcEEEeCC
Confidence            99886543  4688888876

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=4.1e-21  Score=164.68  Aligned_cols=210  Identities=15%  Similarity=0.012  Sum_probs=149.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc---CCCCcEEEccCCCcccHHHHhc---CCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI---GGADDLFIGDIRDSNSIIPAIQ---GIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l---~~~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~  154 (331)
                      ++|++|||||+++||+.++++|+++  |++|++++|++++++++   ..++..+.+|++|++.++++++   ++|++|||
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            4789999999999999999999999  99999999998776554   2358899999999999999987   58999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHH----Hc-CCCeEEEEccCCCCCCCCCCCCCCcchH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAK----AA-GAKQIVLVGSMGGTNLNHPLNSLGNGNI  229 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~----~~-~vk~~v~~SS~~~~~~~~~~~~~~~~~y  229 (331)
                      ||.....  .+...+.++++.       .+++|+.+...+.+++.    +. +-.++|++||..+......     ...|
T Consensus        82 Ag~~~~~--~~~~~~~~~~~~-------~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-----~~~Y  147 (242)
T d1cyda_          82 AALVIMQ--PFLEVTKEAFDR-------SFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-----LITY  147 (242)
T ss_dssp             CCCCCCB--CGGGCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-----BHHH
T ss_pred             Cccccch--hHHHHHHHHHHH-------HHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc-----cccc
Confidence            9974432  122222233333       34888888777766542    22 3458999999876433221     2569


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          230 LVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       230 ~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      ..+|..++.+.+       .+|++++.|.||++..+....    ...........|-  ..+..++|+|++++.++.+..
T Consensus       148 ~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl--~R~~~peeva~~v~fL~S~~s  225 (242)
T d1cyda_         148 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL--RKFAEVEDVVNSILFLLSDRS  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT--SSCBCHHHHHHHHHHHHSGGG
T ss_pred             cchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhCchh
Confidence            999999887765       478999999999997653210    0000000011111  235789999999999887643


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..|+++.+.+
T Consensus       226 ~~itG~~i~vDG  237 (242)
T d1cyda_         226 ASTSGGGILVDA  237 (242)
T ss_dssp             TTCCSSEEEEST
T ss_pred             cCcCCceEEeCc
Confidence              4688898886

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.84  E-value=8.2e-21  Score=164.54  Aligned_cols=211  Identities=12%  Similarity=0.052  Sum_probs=147.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh-------cCCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK-------IGGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .++|++|||||+++||++++++|+++  |++|++++|+.+. .+.       ...++..+++|++|++++.++++     
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999  9999999998643 222       23347889999999999888775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCC-eEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAK-QIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk-~~v~~SS~~~~~~~~  219 (331)
                        ++|++|||||.....  .+...+.++++       ..+++|+.+...+.++    +++.+-. .||++||..+..+..
T Consensus        83 ~G~iDiLVnnAG~~~~~--~~~~~~~~~~~-------~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~  153 (261)
T d1geea_          83 FGKLDVMINNAGLENPV--SSHEMSLSDWN-------KVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP  153 (261)
T ss_dssp             HSCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT
T ss_pred             hCCCCEeeccceecCCc--chhhcCHHHHH-------HHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc
Confidence              689999999975432  12222223333       3348888886665554    4555544 588999987643322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHH
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                      .     ...|..+|..++.+.+       .+|+++++|.||++..+.....    .........+|-  ..+..++|+|+
T Consensus       154 ~-----~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl--~R~~~pediA~  226 (261)
T d1geea_         154 L-----FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM--GYIGEPEEIAA  226 (261)
T ss_dssp             T-----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT--SSCBCHHHHHH
T ss_pred             c-----ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCC--CCCCCHHHHHH
Confidence            1     2569999999887765       4789999999999977643210    000000011111  22568999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.+..  ..|+++.+.+
T Consensus       227 ~v~fL~S~~s~~itG~~i~vDG  248 (261)
T d1geea_         227 VAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhcCCcCCeEEECC
Confidence            9999887654  4789999987

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=5.6e-21  Score=165.09  Aligned_cols=209  Identities=13%  Similarity=0.081  Sum_probs=148.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ++|++|||||+++||++++++|+++  |++|++++|++++++++       ..++.++++|++|++++.++++       
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999  99999999998765442       3457889999999998887764       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|++|||||......  + +.+.++++       ..+++|+.++..+.++    +++.+-.++|++||..+......  
T Consensus        88 ~iDilvnnAG~~~~~~--~-e~~~e~~~-------~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~--  155 (255)
T d1fmca_          88 KVDILVNNAGGGGPKP--F-DMPMADFR-------RAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN--  155 (255)
T ss_dssp             SCCEEEECCCCCCCCC--T-TCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--
T ss_pred             CCCEeeeCCcCCCCCc--c-cCCHHHHH-------HHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc--
Confidence            6999999999754321  1 12222233       3448898887666654    45556668999999876543322  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--h-hhhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--I-RELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                         ...|..+|...+.+.+       .+|++++.|.||++..+...  . .+.........|-  ..+..++|+|++++.
T Consensus       156 ---~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl--~R~g~pedvA~~v~f  230 (255)
T d1fmca_         156 ---MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI--RRLGQPQDIANAALF  230 (255)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS--CSCBCHHHHHHHHHH
T ss_pred             ---cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCC--CCCcCHHHHHHHHHH
Confidence               2569999999887665       47899999999999764211  0 0000000111111  135688999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++.+..  ..|+++.+.+
T Consensus       231 L~S~~s~~itG~~i~vDG  248 (255)
T d1fmca_         231 LCSPAASWVSGQILTVSG  248 (255)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCchhcCCcCCEEEECc
Confidence            987554  4788999987

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.84  E-value=9.2e-21  Score=164.14  Aligned_cols=211  Identities=12%  Similarity=0.024  Sum_probs=148.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .++|++|||||+++||+++++.|+++  |++|++++|+++++++.       .....++++|++|++++.++++      
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999  99999999998766542       2346788999999998887663      


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        ++|++|||||.....  .+...+.++++       ..+++|+.++..+.++    +++.+-.++|++||..+..... 
T Consensus        84 ~~~idilvnnAG~~~~~--~~~~~~~e~~~-------~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-  153 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYK--EAKDYTVEDYS-------LIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP-  153 (259)
T ss_dssp             TTCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT-
T ss_pred             CCCceEEEECCceeccC--ccccCCHHHHH-------HHHhcccceeEEEEeeccchhhhhcccccccccccccccccc-
Confidence              489999999975432  11122222233       3448898887666655    4555667999999987643322 


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-------hhhhhccCCccccCCcccccCHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-------IRELLVGKDDELLQTETRTIARADV  286 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~i~v~Dv  286 (331)
                          ....|..+|..++.+.+       .++++++.|.||++..+...       ....+.......|-  ..+..++|+
T Consensus       154 ----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl--~R~g~pedv  227 (259)
T d2ae2a_         154 ----YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL--RRMGEPKEL  227 (259)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT--CSCBCHHHH
T ss_pred             ----cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC--CCCcCHHHH
Confidence                12569999999887765       46899999999999765311       00011100011111  135689999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |++++.++.+..  ..|+++.+.+
T Consensus       228 A~~v~fL~S~~s~~itG~~i~VDG  251 (259)
T d2ae2a_         228 AAMVAFLCFPAASYVTGQIIYVDG  251 (259)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhCCCcCcEEEECC
Confidence            999999887654  4688888886

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.84  E-value=1.2e-20  Score=163.23  Aligned_cols=208  Identities=18%  Similarity=0.165  Sum_probs=146.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      |.+|||||+++||++++++|+++  |++|++++|++++++++       ..++..+++|++|++++.++++       ++
T Consensus         2 KValITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            45699999999999999999999  99999999998765542       2357889999999999888775       69


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC-CCeEEEEccCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG-AKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      |++|||||.....  .+...+.++++..       +++|+.++..+.+++    ++.+ -.++|++||..+..+...   
T Consensus        80 DilVnnAG~~~~~--~~~~~~~~~~~~~-------~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~---  147 (255)
T d1gega_          80 DVIVNNAGVAPST--PIESITPEIVDKV-------YNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE---  147 (255)
T ss_dssp             CEEEECCCCCCCB--CGGGCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---
T ss_pred             cEEEecccccccC--cHHHhhhhhhhhh-------hhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc---
Confidence            9999999975432  2222333333333       488999887776654    3443 457999999876433321   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch-h-hh--hccCC---------ccccCCcccccCH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI-R-EL--LVGKD---------DELLQTETRTIAR  283 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~-~-~~--~~~~~---------~~~~~~~~~~i~v  283 (331)
                        ...|..+|...+.+.+       .+|++++.|.||++..+.... . ..  ..+..         ..+|-  ..+..+
T Consensus       148 --~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl--~R~~~p  223 (255)
T d1gega_         148 --LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL--GRLSEP  223 (255)
T ss_dssp             --BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT--CSCBCH
T ss_pred             --cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCC--CCCcCH
Confidence              2569999999887765       478999999999997653210 0 00  00000         01111  235689


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|+|++++.++.+..  ..|+++.+.+
T Consensus       224 eevA~~v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         224 EDVAACVSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHHhCchhCCccCcEEEecC
Confidence            999999999887543  4688999887

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.84  E-value=1.3e-20  Score=163.05  Aligned_cols=209  Identities=17%  Similarity=0.127  Sum_probs=150.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------C
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +|.+|||||+++||++++++|+++  |++|++++|+++++++.       ..++.++++|++|+++++++++       +
T Consensus         2 gKValITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            577899999999999999999999  99999999998765542       3357889999999999888775       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH------cCCCeEEEEccCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA------AGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~------~~vk~~v~~SS~~~~~~~~~~  221 (331)
                      +|++|||||.....  .+...+.++++       ..+++|+.++..+.+++..      .+-.++|++||..+...... 
T Consensus        80 iDilVnnAG~~~~~--~~~~~~~e~~~-------~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~-  149 (257)
T d2rhca1          80 VDVLVNNAGRPGGG--ATAELADELWL-------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH-  149 (257)
T ss_dssp             CSEEEECCCCCCCS--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT-
T ss_pred             CCEEEecccccCCC--ChHHcCHHHHH-------HHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc-
Confidence            89999999975432  12222222333       3449999999888887643      35568999999876543322 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-hh------------hhhccCCccccCCccccc
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-IR------------ELLVGKDDELLQTETRTI  281 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~~------------~~~~~~~~~~~~~~~~~i  281 (331)
                          ...|..+|..++.+.+       .+|++++.|.||++-.+... ..            .........+|-  ..+.
T Consensus       150 ----~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl--gR~~  223 (257)
T d2rhca1         150 ----AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI--GRYV  223 (257)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT--SSCB
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC--CCCc
Confidence                2569999999887765       36899999999999765321 00            000000001111  2357


Q ss_pred             CHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          282 ARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .++|+|++++.++.+..  ..|+++.+.+
T Consensus       224 ~pedia~~v~fL~S~~s~~itG~~i~vDG  252 (257)
T d2rhca1         224 QPSEVAEMVAYLIGPGAAAVTAQALNVCG  252 (257)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            89999999999987543  5688899886

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.84  E-value=8.3e-21  Score=164.59  Aligned_cols=211  Identities=18%  Similarity=0.107  Sum_probs=149.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|++++++++       ..++..+.+|++|++++.++++       
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999  99999999998765542       2347889999999998888775       


Q ss_pred             CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCC
Q 046297          147 GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 ~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~  222 (331)
                      ++|++|||||...... .+...+.++++..       +++|+.+...+.++    +++.+-.++|++||..+..+...  
T Consensus        82 ~iDilVnnaG~~~~~~-~~~~~~~~~~~~~-------~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~--  151 (260)
T d1zema1          82 KIDFLFNNAGYQGAFA-PVQDYPSDDFARV-------LTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN--  151 (260)
T ss_dssp             CCCEEEECCCCCCCCB-CGGGCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT--
T ss_pred             CCCeehhhhccccccC-ccccccHHHHHhh-------ccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc--
Confidence            6999999999754322 1222333333333       38888887666555    45556679999999876443221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhh--ccCC--------------ccccCCc
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELL--VGKD--------------DELLQTE  277 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~--~~~~--------------~~~~~~~  277 (331)
                         ...|..+|..++.+.+       .+|++++.|.||++..+...-  ....  .+..              ..+|-  
T Consensus       152 ---~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--  226 (260)
T d1zema1         152 ---MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--  226 (260)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT--
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC--
Confidence               2569999999887765       478999999999998764210  0000  0000              00111  


Q ss_pred             ccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          278 TRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ..+..++|+|.+++.++.+..  -.|+++.+.+
T Consensus       227 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  259 (260)
T d1zema1         227 RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  259 (260)
T ss_dssp             SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence            235678999999999987643  4678888875

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.7e-21  Score=167.13  Aligned_cols=210  Identities=13%  Similarity=0.071  Sum_probs=146.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC-----CCCcEEEccCCCcccHHHHhc-----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG-----GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~-----~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|+.++.++    +.     .++.++++|++|+++++++++     
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999  9999999999866443    21     236788999999999888775     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC---CCeEEEEccCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG---AKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~---vk~~v~~SS~~~~~~  217 (331)
                        ++|++|||||....          .+++..+       ++|+.++..+..++    ++.+   -.+||++||..+..+
T Consensus        80 ~G~iDilVnnAg~~~~----------~~~~~~~-------~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~  142 (254)
T d2gdza1          80 FGRLDILVNNAGVNNE----------KNWEKTL-------QINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP  142 (254)
T ss_dssp             HSCCCEEEECCCCCCS----------SSHHHHH-------HHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC
T ss_pred             cCCcCeeccccccccc----------ccchhee-------eeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC
Confidence              68999999997432          2334433       78887766555544    3332   246999999987544


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcch--hhhhccCCccccC---C---cccc
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQ---T---ETRT  280 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~---~---~~~~  280 (331)
                      ....     ..|..+|..++.+.+         ..|++++.|.||++-.+....  .....+......+   .   ...+
T Consensus       143 ~~~~-----~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  217 (254)
T d2gdza1         143 VAQQ-----PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGI  217 (254)
T ss_dssp             CTTC-----HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCC
T ss_pred             CCCc-----cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCC
Confidence            3222     469999998775532         468999999999986542110  0000000000000   0   0134


Q ss_pred             cCHHHHHHHHHHHhcCcccCCceEEeccCCCCCCCCH
Q 046297          281 IARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPT  317 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~~~~~~~~i~~~~~~~~~t~  317 (331)
                      ..++|+|++++.++.++...|+++.+.+   |..+.+
T Consensus       218 ~~pedvA~~v~fL~s~~~itG~~i~VdG---G~~~~~  251 (254)
T d2gdza1         218 LDPPLIANGLITLIEDDALNGAIMKITT---SKGIHF  251 (254)
T ss_dssp             BCHHHHHHHHHHHHHCTTCSSCEEEEET---TTEEEE
T ss_pred             cCHHHHHHHHHHHHcCCCCCCCEEEECC---CCeeec
Confidence            6889999999999987767899999988   665443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.84  E-value=9.9e-21  Score=165.35  Aligned_cols=212  Identities=9%  Similarity=0.069  Sum_probs=146.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC----------CCCcEEEccCCCcccHHHHhc----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG----------GADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~----------~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ++|+++||||+++||+++++.|+++  |++|++++|++++++++.          .++..+.+|++|++++.++++    
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999  999999999987655421          136789999999998888775    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         ++|++|||||..............++++       ..+++|+.+...+.+++    ++.+-.+++++||..+.....
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~-------~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~  153 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQ-------KTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS  153 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHH-------HHHhhcccccccccccccccccccccccccchhhhhccccCC
Confidence               6899999999643322111111112222       33488888876666554    455556788877766543322


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-----------hhhhhccCCccccCCccccc
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-----------IRELLVGKDDELLQTETRTI  281 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-----------~~~~~~~~~~~~~~~~~~~i  281 (331)
                      .     ...|..+|..++.+.+       .+|++++.|.||++..+...           ....+......+|-+  .+.
T Consensus       154 ~-----~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlg--R~g  226 (274)
T d1xhla_         154 G-----YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG--HCG  226 (274)
T ss_dssp             T-----SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS--SCB
T ss_pred             C-----CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCC--CCc
Confidence            1     2469999999887765       47899999999999765321           111122222222221  246


Q ss_pred             CHHHHHHHHHHHhcCc--c-cCCceEEecc
Q 046297          282 ARADVAEVCIQALQFE--E-AKFKAFDLAS  308 (331)
Q Consensus       282 ~v~Dva~~~~~~l~~~--~-~~~~~~~i~~  308 (331)
                      .++|+|++++.++..+  . -.|+++.+.+
T Consensus       227 ~pediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         227 KPEEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHcCCccccCccCcEEEeCc
Confidence            8999999999988643  2 4789999987

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.83  E-value=1.7e-20  Score=162.35  Aligned_cols=211  Identities=12%  Similarity=0.011  Sum_probs=147.8

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .++|++|||||++.||++++++|+++  |++|++++|+++++++.       .....++.+|++|+++++++++      
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~--G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999  99999999998665542       2346788999999998877664      


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        .+|+|+||||.....  .+.+.+.++++.       ++++|+.+...+.++    +++.+..++|++||..+..+...
T Consensus        82 ~g~idilinnag~~~~~--~~~~~~~~~~~~-------~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~  152 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHK--EAKDFTEKDYNI-------IMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS  152 (258)
T ss_dssp             TSCCCEEEECCCCCCCC--CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT
T ss_pred             CCCcEEEeccccccccC--ccccCCHHHHhh-------hhhhcccccccccccccccccccccccccccccccccccccc
Confidence              379999999975442  222223333333       348888887666554    45566779999999987543322


Q ss_pred             CCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--------hhhccCCccccCCcccccCHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--------ELLVGKDDELLQTETRTIARAD  285 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~i~v~D  285 (331)
                           ...|..+|...+.+.+       ..|+++.+|.||++..+.....        ..........|-  ..+...+|
T Consensus       153 -----~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--gR~~~ped  225 (258)
T d1ae1a_         153 -----VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM--GRAGKPQE  225 (258)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT--CSCBCHHH
T ss_pred             -----chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC--CCCcCHHH
Confidence                 2569999999887765       4689999999999987642100        000000001111  23678999


Q ss_pred             HHHHHHHHhcCcc--cCCceEEecc
Q 046297          286 VAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       286 va~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|.+++.++.+..  ..|+.+.+.+
T Consensus       226 iA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         226 VSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhChhhCCCcCcEEEeCC
Confidence            9999999996553  4788888886

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.83  E-value=1.8e-20  Score=160.43  Aligned_cols=191  Identities=18%  Similarity=0.168  Sum_probs=138.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCe-------EEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc--
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYA-------ARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~-------V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      +.||||||+++||++++++|+++  |++       |++++|++++++++       ...+.++.+|++|++++.++++  
T Consensus         2 ~VvlITGas~GIG~aia~~la~~--G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHh--CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            35899999999999999999999  987       88999998766543       2246789999999998887775  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNL  217 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~  217 (331)
                           ++|++|||||.....  .+...+.++++.       .+++|+.++..+.++    +++.+-.++|++||..+..+
T Consensus        80 ~~~~g~iDilvnnAg~~~~~--~~~~~~~~~~~~-------~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~  150 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFG--ALSDLTEEDFDY-------TMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA  150 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCC--CGGGCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHcCCcceeecccccccCC--ccccCCHHHHhh-------cCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC
Confidence                 689999999975432  122223333333       348898886665554    55666679999999987543


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHH
Q 046297          218 NHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       218 ~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                      ...     ...|..+|...+.+.+       .+|++++.|.||++..+...      .....   ....+..++|+|+++
T Consensus       151 ~~~-----~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~------~~~~~---~~~~~~~PedvA~~v  216 (240)
T d2bd0a1         151 FRH-----SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG------KVDDE---MQALMMMPEDIAAPV  216 (240)
T ss_dssp             CTT-----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC------CCCST---TGGGSBCHHHHHHHH
T ss_pred             CCC-----ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh------hcCHh---hHhcCCCHHHHHHHH
Confidence            321     2569999999886655       47899999999999776421      11111   112346789999999


Q ss_pred             HHHhcCcc
Q 046297          291 IQALQFEE  298 (331)
Q Consensus       291 ~~~l~~~~  298 (331)
                      +.++.++.
T Consensus       217 ~~l~s~~~  224 (240)
T d2bd0a1         217 VQAYLQPS  224 (240)
T ss_dssp             HHHHTSCT
T ss_pred             HHHHcCCc
Confidence            99998764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.83  E-value=6.8e-20  Score=158.02  Aligned_cols=210  Identities=12%  Similarity=0.053  Sum_probs=148.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      .++|++|||||+++||+++++.|+++  |++|++++|++++.++    +..+..++++|++|+++++++++       ++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999  9999999999876554    44567889999999998887775       68


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                      |++|||||.....  .+...+.++++..       +++|+.+...+.+++    ++.+ .+||++||..+..+...    
T Consensus        82 DilVnnAG~~~~~--~~~~~~~~~~~~~-------~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~----  147 (253)
T d1hxha_          82 NVLVNNAGILLPG--DMETGRLEDFSRL-------LKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ----  147 (253)
T ss_dssp             CEEEECCCCCCCB--CTTTCCHHHHHHH-------HHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT----
T ss_pred             CeEEecccccCCC--CcccCCHHHHHHH-------HHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccc----
Confidence            9999999975432  2223333333444       488988876666554    4434 68999999887543322    


Q ss_pred             CcchHHHHHHHHHHHHH-------h--cCCCEEEEecCcccCCCcc-------hhhhhccCCccccCCcccccCHHHHHH
Q 046297          225 GNGNILVWKRKAEQYLA-------D--SGIPYTIIRAGGLQDKEGG-------IRELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~-------~--~~~~~~ilrp~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                       ...|..+|..++.+.+       .  ++++++.|.||++..+...       ............+  .-.+..++|+|+
T Consensus       148 -~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--~gr~~~pedvA~  224 (253)
T d1hxha_         148 -YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNR--AGRAYMPERIAQ  224 (253)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBT--TCCEECHHHHHH
T ss_pred             -cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccc--cCCCCCHHHHHH
Confidence             2569999998776554       1  4699999999999765311       1111111110000  013567899999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.+..  -.|+++.+.+
T Consensus       225 ~v~fL~S~~s~~itG~~i~VDG  246 (253)
T d1hxha_         225 LVLFLASDESSVMSGSELHADN  246 (253)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHhChhhCCCcCcEEEECc
Confidence            9999887554  4788899876

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.82  E-value=1.7e-20  Score=163.04  Aligned_cols=211  Identities=13%  Similarity=0.057  Sum_probs=138.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC----------CCCcEEEccCCCcccHHHHhc----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG----------GADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~----------~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ++|.+|||||+++||++++++|+++  |++|++++|++++++++.          .++.++++|++|++++.++++    
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999  999999999987655421          237889999999999888775    


Q ss_pred             ---CCCEEEEcccCCCCCCC--CCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCC-CCC
Q 046297          147 ---GIDALIILTSAVPKMKP--DFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMG-GTN  216 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~-~~~  216 (331)
                         ++|++|||||.......  .+...+.++|+       ..+++|+.+...+.+++    ++.+ ..+|.++|.. +..
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~-------~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~  153 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYD-------ATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH  153 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHH-------HHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeeccccc
Confidence               68999999997432210  01111122233       33488888876666554    4443 4566666654 332


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC-----------CccccCCcc
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK-----------DDELLQTET  278 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~-----------~~~~~~~~~  278 (331)
                      +...     ...|..+|...+.+.+       .+|++++.|.||++-.+...........           ...+|-  .
T Consensus       154 ~~~~-----~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--~  226 (264)
T d1spxa_         154 ATPD-----FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA--G  226 (264)
T ss_dssp             CCTT-----SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT--S
T ss_pred             cCCC-----chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC--C
Confidence            2211     1459999999887665       4789999999999977643211100000           001111  2


Q ss_pred             cccCHHHHHHHHHHHhcCc--c-cCCceEEecc
Q 046297          279 RTIARADVAEVCIQALQFE--E-AKFKAFDLAS  308 (331)
Q Consensus       279 ~~i~v~Dva~~~~~~l~~~--~-~~~~~~~i~~  308 (331)
                      .+..++|+|++++.++.++  . ..|+++.+.+
T Consensus       227 R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDG  259 (264)
T d1spxa_         227 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG  259 (264)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence            3568899999999998754  2 4788999886

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.82  E-value=6.2e-20  Score=156.55  Aligned_cols=208  Identities=15%  Similarity=0.111  Sum_probs=144.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCc-ccHHHHhcCCCEEEEcccCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDS-NSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~-~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      ++|++|||||+++||++++++|+++  |++|++++|+++.+++..  .+++.+|+++. +.+.+.+.++|++|||||...
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~--Ga~V~~~~r~~~~l~~~~--~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~   78 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKRSG--HRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK   78 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHTC--SEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHhcC--CcEEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence            5789999999999999999999999  999999999987766543  46788999864 445555668999999999643


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHH
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRK  235 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~  235 (331)
                      ..  .+...+.++++.       .+++|+.+...+.+    .+++.+-.++|+++|.........     ...|..+|..
T Consensus        79 ~~--~~~~~~~~~~~~-------~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~-----~~~Y~asKaa  144 (234)
T d1o5ia_          79 AG--FFDELTNEDFKE-------AIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN-----LYTSNSARMA  144 (234)
T ss_dssp             CB--CGGGCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----BHHHHHHHHH
T ss_pred             Cc--chhhhhhHHHHH-------Hhhhhhhhhhhhhhcccccccccccccccccccccccccccc-----cccchhHHHH
Confidence            21  112222222333       33778877655554    456666678999999875433222     2468899999


Q ss_pred             HHHHHH-------hcCCCEEEEecCcccCCCcch--h-hhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCce
Q 046297          236 AEQYLA-------DSGIPYTIIRAGGLQDKEGGI--R-ELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKA  303 (331)
Q Consensus       236 ~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~  303 (331)
                      .+.+.+       .+|++++.|.||++..+....  . .........+|-  ..+..++|+|.+++.++.+..  ..|++
T Consensus       145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl--~R~~~pediA~~v~fL~S~~s~~itG~~  222 (234)
T d1o5ia_         145 LTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM--RRMAKPEEIASVVAFLCSEKASYLTGQT  222 (234)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT--SSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhChhhcCCcCcE
Confidence            886655       468999999999997764320  0 000000011111  235789999999999887544  46889


Q ss_pred             EEecc
Q 046297          304 FDLAS  308 (331)
Q Consensus       304 ~~i~~  308 (331)
                      +.+.+
T Consensus       223 i~vDG  227 (234)
T d1o5ia_         223 IVVDG  227 (234)
T ss_dssp             EEEST
T ss_pred             EEECc
Confidence            99986

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.82  E-value=2.5e-20  Score=159.92  Aligned_cols=208  Identities=15%  Similarity=0.086  Sum_probs=143.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhh-------cCCCCcEEEccCCCcccHHHHhc-------C
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQK-------IGGADDLFIGDIRDSNSIIPAIQ-------G  147 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~-------l~~~~~~v~~Dl~d~~~~~~~l~-------~  147 (331)
                      +.||||||+++||++++++|+++  |++|++.++ +++..++       ...++.++++|++|+++++++++       +
T Consensus         2 pV~lITGas~GIG~a~a~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999  999988655 4443332       23457889999999999887775       6


Q ss_pred             CCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCCC
Q 046297          148 IDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       148 ~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                      +|++|||||.....  .+...+.++++.       .+++|+.+...+.++    +++.+-.+||++||..+..+...   
T Consensus        80 iDiLVnnAg~~~~~--~~~~~~~~~~~~-------~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~---  147 (244)
T d1edoa_          80 IDVVVNNAGITRDT--LLIRMKKSQWDE-------VIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG---  147 (244)
T ss_dssp             CSEEEECCCCCCCC--CGGGCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT---
T ss_pred             CCcccccccccccc--chhccchHHHHH-------HHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCC---
Confidence            89999999975432  122233333333       348898886665554    55566679999999876443222   


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                        ...|..+|...+.+.+       .+|+++++|.||++..+...  ............|-  ..+..++|+|++++.+.
T Consensus       148 --~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl--~R~~~p~dvA~~v~fLa  223 (244)
T d1edoa_         148 --QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPL--GRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTT--CSCBCHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHH
Confidence              2569999999887665       47999999999999765211  00000000011111  23568999999999875


Q ss_pred             -cCcc--cCCceEEecc
Q 046297          295 -QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 -~~~~--~~~~~~~i~~  308 (331)
                       .+..  ..|+++.+.+
T Consensus       224 ~S~~a~~itG~~i~vdG  240 (244)
T d1edoa_         224 LSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HCSGGGGCCSCEEEEST
T ss_pred             CCchhcCCcCCeEEeCC
Confidence             3332  4688888886

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.5e-19  Score=159.44  Aligned_cols=210  Identities=13%  Similarity=0.052  Sum_probs=145.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c--------CCCCcEEEccCCCcccHHHHhc-
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I--------GGADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l--------~~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      .++|++|||||+++||++++++|+++  |++|++++|+.++++.    +        ..++..+++|++|++++.++++ 
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            35789999999999999999999999  9999999999765443    1        1247789999999999888775 


Q ss_pred             ------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCC
Q 046297          147 ------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~  216 (331)
                            ++|++|||||.....  .+.....++++       ..+++|+.++..+.+++    ++.+-.++|.+|+.... 
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~--~~~~~~~e~~~-------~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~-  157 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLS--PAEHISSKGWH-------AVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-  157 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-
T ss_pred             HHHHhCCeEEEEeeccccccC--chhhhhhhhhh-------hhhcccccchhhHHHHHHHhhccccccccccccccccc-
Confidence                  689999999864332  12222222333       33488988877776665    34455678887765421 


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--h----hhhhccCCccccCCcccccCH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--I----RELLVGKDDELLQTETRTIAR  283 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~----~~~~~~~~~~~~~~~~~~i~v  283 (331)
                       ..|    ....|..+|..++.+.+       .+|++++.|.||++..+...  .    ..........+|-  ..+..+
T Consensus       158 -~~~----~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl--gR~g~p  230 (297)
T d1yxma1         158 -GFP----LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA--KRIGVP  230 (297)
T ss_dssp             -CCT----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT--SSCBCT
T ss_pred             -ccc----ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC--CCCcCH
Confidence             122    12568999999887765       36899999999999776421  0    1111111111121  235678


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|||.+++.++.+..  ..|+++.+.+
T Consensus       231 edvA~~v~fL~Sd~s~~iTG~~i~VDG  257 (297)
T d1yxma1         231 EEVSSVVCFLLSPAASFITGQSVDVDG  257 (297)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCchhcCcCCcEEEeCc
Confidence            999999999997643  4688888876

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.82  E-value=6.4e-20  Score=160.01  Aligned_cols=213  Identities=12%  Similarity=0.065  Sum_probs=142.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C------CCCcEEEccCCCcccHHHHhc----
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G------GADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~------~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      ++|++|||||+++||++++++|+++  |++|++++|++++++++    .      .++..+++|++|++++.++++    
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999  99999999998765542    1      136789999999999887775    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEcc-CCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGS-MGGTNLN  218 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS-~~~~~~~  218 (331)
                         ++|++|||||.......  .....+.+...|   ...+++|+.+...+.+++    ++.+ ..+|.++| .++....
T Consensus        82 ~~g~iDilvnnAG~~~~~~~--~~~~~d~~~~~~---~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~  155 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAF--GTTGTDQGIDIY---HKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ  155 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTT--CCCGGGSCHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC
T ss_pred             HhCCceEEEeCCcccCcccc--cccchhccHHHH---HHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCC
Confidence               68999999997543211  011111111111   234478888876666654    4433 35555555 4443222


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-----------hhhhhccCCccccCCcccc
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-----------IRELLVGKDDELLQTETRT  280 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-----------~~~~~~~~~~~~~~~~~~~  280 (331)
                      ..     ...|..+|..++.+.+       .+|++++.|.||++-.+...           ...........+|-  ..+
T Consensus       156 ~~-----~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--gR~  228 (272)
T d1xkqa_         156 PD-----FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI--GAA  228 (272)
T ss_dssp             CS-----SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT--SSC
T ss_pred             CC-----cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC--CCC
Confidence            11     2569999999887665       47899999999999765321           01111112222221  135


Q ss_pred             cCHHHHHHHHHHHhcCc--c-cCCceEEecc
Q 046297          281 IARADVAEVCIQALQFE--E-AKFKAFDLAS  308 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~--~-~~~~~~~i~~  308 (331)
                      ..++|+|++++.++.++  . -.|+++.+.+
T Consensus       229 g~pediA~~v~fL~S~~as~~iTG~~i~vDG  259 (272)
T d1xkqa_         229 GKPEHIANIILFLADRNLSFYILGQSIVADG  259 (272)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence            68999999999988643  2 4789999987

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.81  E-value=6.3e-20  Score=158.27  Aligned_cols=208  Identities=13%  Similarity=0.005  Sum_probs=145.1

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccCCCcccHHHHhc-------CCCEEEEcc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDIRDSNSIIPAIQ-------GIDALIILT  155 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl~d~~~~~~~l~-------~~d~Vi~~a  155 (331)
                      ++|||||+++||+.++++|+++  |++|++.+|+.++.+++... ..++.+|+.|++++.++++       ++|++||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            5899999999999999999999  99999999988776665332 2355689998888877764       699999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHH
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILV  231 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~  231 (331)
                      |...... .+...+.++++..       +++|+.+...+.++    +++.+-.+||++||..+......     ...|..
T Consensus        80 g~~~~~~-~~~~~~~e~~~~~-------~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~-----~~~Y~a  146 (252)
T d1zmta1          80 IFAPEFQ-PIDKYAVEDYRGA-------VEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE-----LSTYTS  146 (252)
T ss_dssp             CCCCCCC-CGGGSCHHHHHHH-------HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT-----CHHHHH
T ss_pred             cCCCCCC-ChhhCCHHHHHHH-------HHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc-----cccccc
Confidence            9643321 1222222333333       37787776655554    56666679999999876443321     256999


Q ss_pred             HHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh---hhhccC-------CccccCCcccccCHHHHHHHHHHHh
Q 046297          232 WKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR---ELLVGK-------DDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       232 sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~---~~~~~~-------~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                      +|..++.+.+       .+|++++.|.||++..+.....   ......       ....+-  ..+...+|+|.+++.++
T Consensus       147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl--~R~g~pedvA~~v~fL~  224 (252)
T d1zmta1         147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL--QRLGTQKELGELVAFLA  224 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS--SSCBCHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHh
Confidence            9999887665       4799999999999976543210   000000       001111  13568999999999998


Q ss_pred             cCcc--cCCceEEecc
Q 046297          295 QFEE--AKFKAFDLAS  308 (331)
Q Consensus       295 ~~~~--~~~~~~~i~~  308 (331)
                      .+..  ..|+++.+.+
T Consensus       225 S~~s~~iTG~~i~vdG  240 (252)
T d1zmta1         225 SGSCDYLTGQVFWLAG  240 (252)
T ss_dssp             TTSCGGGTTCEEEEST
T ss_pred             CchhcCCcCCeEEECC
Confidence            7654  4688999987

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.81  E-value=7.4e-20  Score=156.68  Aligned_cols=209  Identities=15%  Similarity=0.074  Sum_probs=144.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      ++|++|||||++.||+.+++.|+++  |++|++.+|+.++.++    +..++.++++|++|+++++++++       ++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            4789999999999999999999999  9999999999876544    44557889999999999987775       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNG  227 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~  227 (331)
                      ++|||||.....  .+...+..+++       ..+++|+.+...+.+++...  +-+.++.+|+.+. ... |    ...
T Consensus        82 iLinnAg~~~~~--~~~~~~~~~~~-------~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~-~~~-~----~~~  146 (241)
T d2a4ka1          82 GVAHFAGVAHSA--LSWNLPLEAWE-------KVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG-LGA-F----GLA  146 (241)
T ss_dssp             EEEEGGGGTTTT--C----CHHHHH-------HHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT-CCH-H----HHH
T ss_pred             Eecccccccccc--chhhhhccccc-------cccccccccccccccccccccccccceeecccccc-ccc-c----Ccc
Confidence            999999874432  12222222333       33488999988888877544  2335555555443 211 1    124


Q ss_pred             hHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc--hhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc
Q 046297          228 NILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG--IRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       228 ~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      .|..+|...|.+.+       .+|+++.+|.||.+-.+...  ............+-  ..+..++|+|++++.++.+..
T Consensus       147 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~--~r~~~p~dva~~v~fL~S~~s  224 (241)
T d2a4ka1         147 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL--GRAGRPEEVAQAALFLLSEES  224 (241)
T ss_dssp             HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTT--CSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCC--CCCcCHHHHHHHHHHHhcchh
Confidence            69999999987765       36899999999998655321  00000000011111  235689999999999987643


Q ss_pred             --cCCceEEecc
Q 046297          299 --AKFKAFDLAS  308 (331)
Q Consensus       299 --~~~~~~~i~~  308 (331)
                        ..|+++.+.+
T Consensus       225 ~~itG~~i~vDG  236 (241)
T d2a4ka1         225 AYITGQALYVDG  236 (241)
T ss_dssp             TTCCSCEEEEST
T ss_pred             CCCcCceEEeCC
Confidence              5788898887

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=1.9e-19  Score=158.99  Aligned_cols=222  Identities=15%  Similarity=0.104  Sum_probs=154.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh---------hh----cCCCCcEEEccCCCcccHHHHhc-
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK---------QK----IGGADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~---------~~----l~~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      ++|++|||||+++||+++++.|+++  |++|++.+|+.+..         ++    +......+.+|+.|.++++++++ 
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence            4789999999999999999999999  99999998764321         11    22336677889999888776664 


Q ss_pred             ------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCC
Q 046297          147 ------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~  216 (331)
                            ++|++|||||.....  .+...+.++++..+       ++|+.++..+.++    +++.+-.+||++||..+..
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~--~~~~~~~e~~~~~~-------~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~  154 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDR--SFSRISDEDWDIIQ-------RVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  154 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCC--CGGGCCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHcCCCCEEEECCccCCCC--ChhhCCHHHHhhhh-------ceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC
Confidence                  699999999975432  22233333344443       8999987666655    5566667999999987644


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEV  289 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  289 (331)
                      ...     ....|..+|..++.+.+       .+|++++.|.||.+........          +........++|+|.+
T Consensus       155 ~~~-----~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~----------~~~~~~~~~PedvA~~  219 (302)
T d1gz6a_         155 GNF-----GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM----------PEDLVEALKPEYVAPL  219 (302)
T ss_dssp             CCT-----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS----------CHHHHHHSCGGGTHHH
T ss_pred             CCC-----CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC----------cHhhHhcCCHHHHHHH
Confidence            332     22569999999887765       4789999999998754332110          1111234568999999


Q ss_pred             HHHHhcCcc-cCCceEEeccC----------------CCCCCCCHHHHHHHHHHhh
Q 046297          290 CIQALQFEE-AKFKAFDLASK----------------PEGTGTPTKDFKALFSQIT  328 (331)
Q Consensus       290 ~~~~l~~~~-~~~~~~~i~~~----------------~~~~~~t~~e~~~~~~~~~  328 (331)
                      ++.+..... ..|+++.+.++                ..+.+.|.+++++.+.++.
T Consensus       220 v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~  275 (302)
T d1gz6a_         220 VLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKIC  275 (302)
T ss_dssp             HHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHT
T ss_pred             HHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHh
Confidence            999885432 45666655331                0134678899998888764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1e-19  Score=157.37  Aligned_cols=205  Identities=19%  Similarity=0.155  Sum_probs=138.6

Q ss_pred             ccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----C-----CCCcEEEccCCCcccHHHHhc--
Q 046297           78 LSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----G-----GADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        78 ~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~-----~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      ...++|++|||||+++||+++++.|+++  |++|++.+|++++.+++    .     ..+.++++|++|++++.++++  
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3345789999999999999999999999  99999999998765542    1     236788999999998888775  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcC--CCeEEEEccCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAG--AKQIVLVGSMGGT  215 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~--vk~~v~~SS~~~~  215 (331)
                           ++|++|||||.....  .+...+.++++.       ..++|+.+...+.++    +++.+  -.++|++||..+.
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~--~~~~~~~~~~~~-------~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~  154 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPD--TLLSGSTSGWKD-------MFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH  154 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCC--CTTTCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred             HHhcCCCCEEEecccccCCC--ccccccHHHHHh-------hhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhc
Confidence                 699999999975432  122222233333       337887776665544    44444  3589999998764


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchhhhhccCCcccc--CCcccccCHH
Q 046297          216 NLNHPLNSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL--QTETRTIARA  284 (331)
Q Consensus       216 ~~~~~~~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~i~v~  284 (331)
                      ... |.  .....|..+|..++.+.+         .+++++++|.||.+-.+...  ...........  .....+..++
T Consensus       155 ~~~-p~--~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~--~~~~~~~~~~~~~~~~~r~~~pe  229 (257)
T d1xg5a_         155 RVL-PL--SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF--KLHDKDPEKAAATYEQMKCLKPE  229 (257)
T ss_dssp             SCC-SC--GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH--HHTTTCHHHHHHHHC---CBCHH
T ss_pred             CCC-CC--cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh--hcChhhHHHHHhcCCCCCCcCHH
Confidence            322 21  122459999998876543         36899999999988654311  11111100000  0113467899


Q ss_pred             HHHHHHHHHhcCcc
Q 046297          285 DVAEVCIQALQFEE  298 (331)
Q Consensus       285 Dva~~~~~~l~~~~  298 (331)
                      |+|++++.++.++.
T Consensus       230 dvA~~v~fL~s~~a  243 (257)
T d1xg5a_         230 DVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhCChh
Confidence            99999999987764

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.80  E-value=1.2e-19  Score=156.59  Aligned_cols=204  Identities=13%  Similarity=0.086  Sum_probs=142.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCC-CcccHHHHhc----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIR-DSNSIIPAIQ----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~-d~~~~~~~l~----  146 (331)
                      .++|+||||||+++||..++++|+++  |++|+++.|+.++.+.+        ..++.++.+|++ +.++++++++    
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999  99999999987654332        124788999998 5555666553    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----c---CCCeEEEEccCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----A---GAKQIVLVGSMGGTN  216 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----~---~vk~~v~~SS~~~~~  216 (331)
                         ++|++|||||...          ..+++..+       ++|+.++..+.+++..    .   ...++|++||..+..
T Consensus        81 ~~g~iDilvnnAG~~~----------~~~~~~~~-------~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~  143 (254)
T d1sbya1          81 QLKTVDILINGAGILD----------DHQIERTI-------AINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN  143 (254)
T ss_dssp             HHSCCCEEEECCCCCC----------TTCHHHHH-------HHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS
T ss_pred             HcCCCCEEEeCCCCCC----------HHHHHHHH-------HHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc
Confidence               6999999999532          23444444       8999987777766533    2   235799999998754


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcccc--CCcccccCHHHHH
Q 046297          217 LNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELL--QTETRTIARADVA  287 (331)
Q Consensus       217 ~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva  287 (331)
                      +....     ..|..+|.....+.+       .++++++.|.||++..+..............+.  .........+++|
T Consensus       144 ~~~~~-----~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va  218 (254)
T d1sbya1         144 AIHQV-----PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCG  218 (254)
T ss_dssp             CCTTS-----HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHH
T ss_pred             CCCCC-----HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHH
Confidence            43322     469999999876654       478999999999998752110000000000000  0123445789999


Q ss_pred             HHHHHHhcCcccCCceEEecc
Q 046297          288 EVCIQALQFEEAKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i~~  308 (331)
                      ++++.+++.. ..|+++.+.+
T Consensus       219 ~~~~~~~~~~-~tG~vi~vdg  238 (254)
T d1sbya1         219 QNFVKAIEAN-KNGAIWKLDL  238 (254)
T ss_dssp             HHHHHHHHHC-CTTCEEEEET
T ss_pred             HHHHHhhhCC-CCCCEEEECC
Confidence            9999888765 4788888876

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.5e-19  Score=154.78  Aligned_cols=192  Identities=15%  Similarity=0.085  Sum_probs=139.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      -.++++|||||+++||++++++|+++  |++|++++|++++++++       ..++..+.+|++|++++.++++      
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~--G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999  99999999998776543       3357899999999999888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~~~  221 (331)
                       ++|++|||||.......         .+...+....++++|+.+...+.+    .+++.+-.+||++||..+..+. |.
T Consensus        83 g~idilinnag~~~~~~~---------~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~-~~  152 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDL---------FATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-PF  152 (244)
T ss_dssp             CCCSEEEECCCCCCCCCC---------GGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-HH
T ss_pred             CCCceeEeeccccccccc---------cccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC-CC
Confidence             68999999997544211         122222234555889888666555    4566677799999999875432 11


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------h---cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------D---SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                          ...|..+|+..+.+.+       .   .|++++.+.||++-.+...      ....    .....+..+|+|+.++
T Consensus       153 ----~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~------~~~~----~~~~~~~pe~va~~i~  218 (244)
T d1yb1a_         153 ----LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK------NPST----SLGPTLEPEEVVNRLM  218 (244)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT------CTHH----HHCCCCCHHHHHHHHH
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh------CcCc----cccCCCCHHHHHHHHH
Confidence                1469999999876654       1   3799999999998655321      1100    1123467899999999


Q ss_pred             HHhcCc
Q 046297          292 QALQFE  297 (331)
Q Consensus       292 ~~l~~~  297 (331)
                      ..+..+
T Consensus       219 ~~~~~~  224 (244)
T d1yb1a_         219 HGILTE  224 (244)
T ss_dssp             HHHHTT
T ss_pred             HHHhcC
Confidence            888665

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.5e-19  Score=155.18  Aligned_cols=212  Identities=13%  Similarity=0.056  Sum_probs=148.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHhc---CCCEEEEc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAIQ---GIDALIIL  154 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l~---~~d~Vi~~  154 (331)
                      .++|++|||||++.||+++++.|+++  |++|++++|++++++++.+  .+....+|+.+.+.+....+   ++|++|||
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~--G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEec
Confidence            34789999999999999999999999  9999999999888777644  36788889888776665553   79999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcCCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAGAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      +|......  +...+.++++.       .+++|+.++..+.+++    ++.+-.++|++||..+.....    .....|+
T Consensus        82 ag~~~~~~--~~~~~~~~~~~-------~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~----~~~~~Y~  148 (245)
T d2ag5a1          82 AGFVHHGT--VLDCEEKDWDF-------SMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV----VNRCVYS  148 (245)
T ss_dssp             CCCCCCBC--GGGCCHHHHHH-------HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----TTBHHHH
T ss_pred             ccccCCCC--hhhCCHHHHHH-------HHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCc----cchhHHH
Confidence            99755421  11222222333       3378888876665554    455667999999876522211    1225699


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC--------CccccCCcccccCHHHHHHHHHHHhc
Q 046297          231 VWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK--------DDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       231 ~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~--------~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                      .+|...+.+.+       ..|++++.|.||++-++...........        ....+-  ..+..++|+|+++..++.
T Consensus       149 ~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--~R~~~pedva~~v~fL~s  226 (245)
T d2ag5a1         149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT--GRFATAEEIAMLCVYLAS  226 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT--SSCEEHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC--CCCcCHHHHHHHHHHHhC
Confidence            99999988776       4689999999999976542210000000        001111  235688999999999997


Q ss_pred             Ccc--cCCceEEecc
Q 046297          296 FEE--AKFKAFDLAS  308 (331)
Q Consensus       296 ~~~--~~~~~~~i~~  308 (331)
                      ++.  ..|+++.+.+
T Consensus       227 ~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         227 DESAYVTGNPVIIDG  241 (245)
T ss_dssp             GGGTTCCSCEEEECT
T ss_pred             hhhCCCcCceEEeCC
Confidence            654  4788898887

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.79  E-value=9.2e-20  Score=157.98  Aligned_cols=216  Identities=14%  Similarity=0.136  Sum_probs=145.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh--------cCCCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK--------IGGADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~--------l~~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      -++|++|||||+++||++++++|+++  |++|++++|++++..+        ...++..+++|++|++++.++++     
T Consensus         7 l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           7 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999  9999999999876543        23457889999999999888875     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHc-CCCeEEEEccCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAA-GAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~-~vk~~v~~SS~~~~~~~~  219 (331)
                        ++|++|||||.....  .+...+.++++       ..+++|+.++..+.+++    .+. +-..++..++........
T Consensus        85 ~g~iDilVnnAg~~~~~--~~~~~~~~~~~-------~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~  155 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVK--PATELTHEDFA-------FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ  155 (260)
T ss_dssp             SCSEEEEEECCCCCCCS--CGGGCCHHHHH-------HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE
T ss_pred             hCCCcEecccccccccC--CHHHhcccccc-------ccccccccchhhhhhhhcccccccccceEEEEeeccccccccc
Confidence              689999999974332  11122222333       33488888876665543    333 344566666654322111


Q ss_pred             --CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCCccccCCcccccCHHHHHH
Q 046297          220 --PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKDDELLQTETRTIARADVAE  288 (331)
Q Consensus       220 --~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~  288 (331)
                        .........|..+|...+.+.+       .+|+++++|.||++-.+....  ..........+|-  ..+..++|+|+
T Consensus       156 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl--~R~g~pedvA~  233 (260)
T d1h5qa_         156 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPL--NRFAQPEEMTG  233 (260)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTT--SSCBCGGGGHH
T ss_pred             cccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCC--CCCcCHHHHHH
Confidence              0111122579999999887655       478999999999997654221  0110000111121  13578999999


Q ss_pred             HHHHHhcCcc--cCCceEEecc
Q 046297          289 VCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       289 ~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +++.++.+..  ..|+++.+.+
T Consensus       234 ~v~fL~S~~s~~itG~~i~VDG  255 (260)
T d1h5qa_         234 QAILLLSDHATYMTGGEYFIDG  255 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECT
T ss_pred             HHHHHhcchhCCCcCceEEECC
Confidence            9999887654  4688999887

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.79  E-value=3.8e-19  Score=155.35  Aligned_cols=214  Identities=15%  Similarity=0.106  Sum_probs=144.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      ++|++|||||+++||+++++.|+++  |++|++++|++++++++    ..++..+.+|++|++++.++++       ++|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAE--GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence            4689999999999999999999999  99999999998776553    3457889999999998887764       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      ++|||||......... ....+..+..|   ...+++|+.+...+.++    +++.+ .++|+++|..+..+..     .
T Consensus        82 ilvnnAG~~~~~~~~~-~~~~e~~~~~~---~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~-----~  151 (276)
T d1bdba_          82 TLIPNAGIWDYSTALV-DLPEESLDAAF---DEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNG-----G  151 (276)
T ss_dssp             EEECCCCCCCTTCCGG-GSCTTTHHHHH---HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTS-----S
T ss_pred             cccccccccCCCCccc-cccccchhhhh---hHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCC-----C
Confidence            9999999754322100 00111101111   23347888886665554    45555 5888888886644322     1


Q ss_pred             cchHHHHHHHHHHHHHh------cCCCEEEEecCcccCCCcchhhh------hccC------CccccCCcccccCHHHHH
Q 046297          226 NGNILVWKRKAEQYLAD------SGIPYTIIRAGGLQDKEGGIREL------LVGK------DDELLQTETRTIARADVA  287 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~~------~~~~~~ilrp~~v~g~~~~~~~~------~~~~------~~~~~~~~~~~i~v~Dva  287 (331)
                      ...|..+|..++.+.+.      .+++++.|.||++..+.......      ....      ...+|-  ..+..++|+|
T Consensus       152 ~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--gR~g~peeva  229 (276)
T d1bdba_         152 GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI--GRMPEVEEYT  229 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT--SSCCCGGGGS
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC--CCCcCHHHHH
Confidence            25699999998876651      35999999999997653211000      0000      000111  1245789999


Q ss_pred             HHHHHHhcCc--c-cCCceEEecc
Q 046297          288 EVCIQALQFE--E-AKFKAFDLAS  308 (331)
Q Consensus       288 ~~~~~~l~~~--~-~~~~~~~i~~  308 (331)
                      .+++.++..+  . ..|+++.+.+
T Consensus       230 ~~v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         230 GAYVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             HHHHHHHCHHHHTTCSSCEEEESS
T ss_pred             HHHHHHcCCcccCCeeCcEEEECc
Confidence            9999887532  2 4688999976

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.79  E-value=8.6e-19  Score=150.77  Aligned_cols=168  Identities=15%  Similarity=0.110  Sum_probs=119.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhc-CCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhc--------
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQ--------  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~--------  146 (331)
                      ||+||||||+++||+++++.|++. ..|++|++.+|++++.+++      ..++.++.+|++|+++++++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            678999999999999999999851 1299999999998776543      2468899999999998886654        


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHc-----------CCCeEEEEc
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAA-----------GAKQIVLVG  210 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~-----------~vk~~v~~S  210 (331)
                       ++|++|||||....... +......++       ...+++|+.+...+.+++    ++.           +-.++|.++
T Consensus        82 ~~iDiLvnNAg~~~~~~~-~~~~~~~~~-------~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~  153 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSAR-ITAVRSQEL-------LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  153 (248)
T ss_dssp             GCCSEEEECCCCCCCCCC-GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             CCcceEEeeccccccCcc-cccCCHHHH-------HHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence             58999999997543211 111111112       234488988876666554    332           346899999


Q ss_pred             cCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCC
Q 046297          211 SMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKE  259 (331)
Q Consensus       211 S~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~  259 (331)
                      |..+.....+...  ...|..+|.....+.+       +.|++++.|.||++-.+.
T Consensus       154 S~~g~~~~~~~~~--~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         154 SILGSIQGNTDGG--MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             CGGGCSTTCCSCC--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             ccccccCCCCCCC--hHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            9865433333221  2469999999776654       478999999999997764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=2.6e-19  Score=154.86  Aligned_cols=216  Identities=14%  Similarity=0.115  Sum_probs=143.2

Q ss_pred             cCCCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCchhhh------cCCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEESKQK------IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~------l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +.++|++|||||+|  +||++++++|+++  |++|++..|+++..+.      ......++++|++|+++++++++    
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            45689999999998  8999999999999  9999999888643322      12347789999999999888775    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~  221 (331)
                         ++|++|||||........  .   ...+...++....+++|+.+...+.+++...  +-.++|++||..+...... 
T Consensus        83 ~~g~iDilVnnag~~~~~~~~--~---~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~-  156 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAME--G---RYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK-  156 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHS--S---CGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT-
T ss_pred             hcCCceEEEeccccccccccc--c---chhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC-
Confidence               689999999975432100  0   0001111111223477888888777776532  1247999999876443222 


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch----hhhhccCCccccCCcccccCHHHHHHHH
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI----RELLVGKDDELLQTETRTIARADVAEVC  290 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~  290 (331)
                          ...|..+|..++.+.+       .+|++++.|.||.+..+....    ...........|-  ..+..++|+|+++
T Consensus       157 ----~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl--~R~~~pedvA~~v  230 (256)
T d1ulua_         157 ----YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL--RRNITQEEVGNLG  230 (256)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTT--SSCCCHHHHHHHH
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCC--CCCcCHHHHHHHH
Confidence                2569999999887765       478999999999997754321    1111100111111  2356899999999


Q ss_pred             HHHhcCcc--cCCceEEecc
Q 046297          291 IQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       291 ~~~l~~~~--~~~~~~~i~~  308 (331)
                      +.++.+..  ..|+++.+.+
T Consensus       231 ~fL~S~~s~~itG~~i~VDG  250 (256)
T d1ulua_         231 LFLLSPLASGITGEVVYVDA  250 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhCCccCCeEEECc
Confidence            99987654  4788898887

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=1e-18  Score=151.27  Aligned_cols=213  Identities=15%  Similarity=0.103  Sum_probs=142.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh-------cCCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK-------IGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~-------l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      .+|+||||||+++||+++++.|+++  |++|++..|+.++ .+.       ...++..+++|++|++++++.++      
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~--G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999  9999987765433 222       23457899999999999888775      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~  223 (331)
                       ++|++|||||......  +.....+++       ...+++|+.+...+++++..+  .-++++.++|..+.....|.  
T Consensus        83 g~idilinnag~~~~~~--~~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~--  151 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCD--ELEVTQELF-------DKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN--  151 (259)
T ss_dssp             SCEEEEECCCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS--
T ss_pred             CCCcEEEeccccccccc--cccchHHHH-------HHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC--
Confidence             6899999999753321  111222222       233488888888877777543  12356666665442222111  


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh--hhhccCCccc----------cCC-cccccCH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR--ELLVGKDDEL----------LQT-ETRTIAR  283 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~----------~~~-~~~~i~v  283 (331)
                        ...|..+|...+.+.+       ..|+++..|.||++-.+...-.  ..........          ... -..+...
T Consensus       152 --~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p  229 (259)
T d1ja9a_         152 --HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYP  229 (259)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCH
T ss_pred             --chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCH
Confidence              1469999999887765       4689999999999965421100  0000000000          000 1236789


Q ss_pred             HHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          284 ADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       284 ~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      +|||++++.++.+..  -.|+++.+.+
T Consensus       230 ~eVa~~v~fL~S~~a~~itG~~i~vDG  256 (259)
T d1ja9a_         230 ADIGRAVSALCQEESEWINGQVIKLTG  256 (259)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCchhcCCcCceEEeCC
Confidence            999999999998764  4788898886

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=3.1e-18  Score=149.24  Aligned_cols=215  Identities=16%  Similarity=0.127  Sum_probs=147.5

Q ss_pred             hccCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhh-------cCCCCcEEEccCCCcccHHHHhc--
Q 046297           77 VLSMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQK-------IGGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        77 ~~~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~-------l~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      +.+.++|++|||||++.||++++++|+++  |++|++++|+.++ .++       ....+.++++|++|++++.+.++  
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHH
Confidence            44567899999999999999999999999  9999999887543 222       23458889999999999888775  


Q ss_pred             -----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCC
Q 046297          147 -----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 -----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~  219 (331)
                           ++|++|||+|......  +......++       ...+++|+.+...+.+++...  .-+++++++|..+.....
T Consensus        91 ~~~~g~idilV~nag~~~~~~--~~~~~~~~~-------~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~  161 (272)
T d1g0oa_          91 VKIFGKLDIVCSNSGVVSFGH--VKDVTPEEF-------DRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV  161 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCC--GGGCCHHHH-------HHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC
T ss_pred             HHHhCCCCccccccccchhhh--hhhhhhhHH-------HHHhhhccceeeeeccccccccccccccccccccccccccc
Confidence                 6899999999754321  111111222       233488888888888877653  224777787765422211


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcch--hhhhccCC-------------ccccCCc
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGI--RELLVGKD-------------DELLQTE  277 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~-------------~~~~~~~  277 (331)
                      +    ....|..+|..++.+.+       .+|++++.|.||++-.+....  ........             ...|-  
T Consensus       162 ~----~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--  235 (272)
T d1g0oa_         162 P----KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL--  235 (272)
T ss_dssp             S----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT--
T ss_pred             c----chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC--
Confidence            1    12459999999887765       479999999999997653110  00000000             00111  


Q ss_pred             ccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          278 TRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       278 ~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ..+...+|||.+++.++.+..  ..|+++.+.+
T Consensus       236 gR~~~peevA~~v~fL~s~~s~~itG~~i~vDG  268 (272)
T d1g0oa_         236 RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  268 (272)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCceEeECC
Confidence            235789999999999997654  4788898887

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.78  E-value=1.9e-18  Score=148.78  Aligned_cols=203  Identities=14%  Similarity=0.077  Sum_probs=132.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCC--eEEEEecCCchhhhcC----CCCcEEEccCCCcccHHHHhc-------
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQY--AARGLVRTEESKQKIG----GADDLFIGDIRDSNSIIPAIQ-------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~--~V~~l~R~~~~~~~l~----~~~~~v~~Dl~d~~~~~~~l~-------  146 (331)
                      |.+|+||||||+++||++++++|+++  |+  .|++..|+.++.+++.    .++.++++|++|.++++++++       
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~--G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHC--CCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            45689999999999999999999999  74  7888999988776643    357899999999988877663       


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HHcC-----------CCeEEEE
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KAAG-----------AKQIVLV  209 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-----------vk~~v~~  209 (331)
                        ++|++|||||....... ......+++       ...+++|+.|+..+.+++    ++.+           ..+++.+
T Consensus        79 ~~~idilinnAG~~~~~~~-~~~~~~~~~-------~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~  150 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGT-NTEPNRAVI-------AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITI  150 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCT-TSCCCHHHH-------HHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEE
T ss_pred             CCCeEEEEEcCcccCCCCc-cccCCHHHH-------HHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccc
Confidence              38999999997543221 111111122       234488999877766554    3321           2467777


Q ss_pred             ccCCCCCCC--CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccc
Q 046297          210 GSMGGTNLN--HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRT  280 (331)
Q Consensus       210 SS~~~~~~~--~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  280 (331)
                      |+.......  ......+...|..+|.....+.+       +.|++++.+.||++-.+...               ....
T Consensus       151 s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~---------------~~~~  215 (250)
T d1yo6a1         151 SSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG---------------KNAA  215 (250)
T ss_dssp             CCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred             ccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC---------------CCCC
Confidence            776432221  11222233569999999876654       47899999999999765321               1123


Q ss_pred             cCHHHHHHHHHHHhcCc--ccCCceEEec
Q 046297          281 IARADVAEVCIQALQFE--EAKFKAFDLA  307 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~--~~~~~~~~i~  307 (331)
                      +++++.++.++..+...  ...|+.|+..
T Consensus       216 ~~~e~~a~~~~~~~~~~~~~~sG~f~~~~  244 (250)
T d1yo6a1         216 LTVEQSTAELISSFNKLDNSHNGRFFMRN  244 (250)
T ss_dssp             ---HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCeEEECCC
Confidence            67889999999888754  3557666543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2.2e-19  Score=155.55  Aligned_cols=213  Identities=11%  Similarity=0.040  Sum_probs=145.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHh---cCCCCeEEEEecCCchhhhcC---------CCCcEEEccCCCcccHHHHhc-
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKE---RSEQYAARGLVRTEESKQKIG---------GADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~---~~~g~~V~~l~R~~~~~~~l~---------~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      ..+|.++||||+++||++++++|.+   +  |++|++++|++++++++.         .++.++++|++|++++.++++ 
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccC--CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            4578899999999999999999986   5  999999999987765431         236789999999998887763 


Q ss_pred             ----------CCCEEEEcccCCCCCC-CCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----C--CCeEEEE
Q 046297          147 ----------GIDALIILTSAVPKMK-PDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----G--AKQIVLV  209 (331)
Q Consensus       147 ----------~~d~Vi~~ag~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~--vk~~v~~  209 (331)
                                ..|+++||||...... ..+...+..+++.       .+++|+.+...+.+++...    +  -.++|++
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~-------~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~i  154 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN-------YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNI  154 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHH-------HHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEE
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHH-------HHHHhhhhhHHHHHHHHHHHHhcCCCccccccc
Confidence                      3579999999754321 1111222222333       3489999988888877543    2  2489999


Q ss_pred             ccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-----hcCCCEEEEecCcccCCCcchhhhhccCCcc---cc--CCccc
Q 046297          210 GSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-----DSGIPYTIIRAGGLQDKEGGIRELLVGKDDE---LL--QTETR  279 (331)
Q Consensus       210 SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-----~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~---~~--~~~~~  279 (331)
                      ||..+..+...     ...|..+|...+.+.+     ..+++++.|.||++..+...........+..   +.  ...-.
T Consensus       155 sS~~~~~~~~~-----~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r  229 (259)
T d1oaaa_         155 SSLCALQPYKG-----WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGA  229 (259)
T ss_dssp             CCGGGTSCCTT-----CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTC
T ss_pred             ccccccCCCcc-----chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCC
Confidence            99877544322     2569999999887665     4789999999999987632111000000000   00  00112


Q ss_pred             ccCHHHHHHHHHHHhcCcc-cCCceEEe
Q 046297          280 TIARADVAEVCIQALQFEE-AKFKAFDL  306 (331)
Q Consensus       280 ~i~v~Dva~~~~~~l~~~~-~~~~~~~i  306 (331)
                      +..++|+|++++.++..+. ..|+.+++
T Consensus       230 ~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         230 LVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             SBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            4689999999999987654 45666665

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.75  E-value=3.3e-18  Score=147.97  Aligned_cols=198  Identities=17%  Similarity=0.178  Sum_probs=139.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhh-------h---cCCCCcEEEccCCCcccHHHHhc----
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQ-------K---IGGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~-------~---l~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +.+||||||+|+||+++++.|+++  |+ +|+++.|+..+.+       +   ....+.++.+|++|++++.++++    
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence            468999999999999999999999  98 4788888743221       1   12347899999999999988875    


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSL  224 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~  224 (331)
                        ++|.|+||+|......  +..       ...++....+++|+.+..++.++++..+..+||++||..+.......   
T Consensus        87 ~~~i~~vv~~ag~~~~~~--~~~-------~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~---  154 (259)
T d2fr1a1          87 DVPLSAVFHAAATLDDGT--VDT-------LTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL---  154 (259)
T ss_dssp             TSCEEEEEECCCCCCCCC--GGG-------CCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC---
T ss_pred             cccccccccccccccccc--ccc-------ccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCccc---
Confidence              4799999999754321  111       11111233457899999999998888888899999999765433322   


Q ss_pred             CcchHHHHHHHHHHHHH---hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCccc
Q 046297          225 GNGNILVWKRKAEQYLA---DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEA  299 (331)
Q Consensus       225 ~~~~y~~sK~~~e~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  299 (331)
                        ..|+.+|...+.+.+   ..|++++.|.||.+.+.+..... ..   ..+...+...++.+++++++..++..+..
T Consensus       155 --~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~-~~---~~~~~~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         155 --GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP-VA---DRFRRHGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             --TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----------------CTTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             --HHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccch-HH---HHHHhcCCCCCCHHHHHHHHHHHHhCCCc
Confidence              458899998886654   57999999999998765432111 11   11122345678999999999999987653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2e-18  Score=151.32  Aligned_cols=201  Identities=19%  Similarity=0.204  Sum_probs=132.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe---cCCchhhh-------c---CCCCcEEEccCCCcccHHHHhc--
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV---RTEESKQK-------I---GGADDLFIGDIRDSNSIIPAIQ--  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~---R~~~~~~~-------l---~~~~~~v~~Dl~d~~~~~~~l~--  146 (331)
                      +|.||||||+++||+++++.|+++  |++|+.+.   |+.+....       +   ..++..+.+|++|++++.++++  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~--Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHC--CCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhc
Confidence            456789999999999999999999  88755544   44332221       1   2347889999999999988875  


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHH----HHHHcCCCeEEEEccCCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQID----AAKAAGAKQIVLVGSMGGTNLNH  219 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~vk~~v~~SS~~~~~~~~  219 (331)
                         .+|+++||+|......  +.....+++       ...+++|+.|+.++.+    .+++.+-.++|++||..+..+..
T Consensus        80 ~~g~idilvnnag~~~~~~--~~~~~~e~~-------~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~  150 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGP--LEALGEDAV-------ASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP  150 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSC--GGGSCHHHH-------HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT
T ss_pred             cccchhhhhhccccccccc--ccchhHhhh-------hhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCC
Confidence               5899999999754421  111222222       3344889888666555    45667777999999998754332


Q ss_pred             CCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-----hhhhhccCCccccC------------
Q 046297          220 PLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-----IRELLVGKDDELLQ------------  275 (331)
Q Consensus       220 ~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-----~~~~~~~~~~~~~~------------  275 (331)
                      ..     ..|..+|+..+.+.+       .+|+++++|.||++-.+...     .............+            
T Consensus       151 ~~-----~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
T d1jtva_         151 FN-----DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV  225 (285)
T ss_dssp             TC-----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             Cc-----hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhh
Confidence            22     569999999887655       47999999999999765321     01111000000000            


Q ss_pred             CcccccCHHHHHHHHHHHhcCcc
Q 046297          276 TETRTIARADVAEVCIQALQFEE  298 (331)
Q Consensus       276 ~~~~~i~v~Dva~~~~~~l~~~~  298 (331)
                      .......++|||++++.+++.+.
T Consensus       226 ~~~~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         226 FREAAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             HHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             hcccCCCHHHHHHHHHHHHhCCC
Confidence            00124578999999999998764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.6e-17  Score=142.69  Aligned_cols=214  Identities=13%  Similarity=0.005  Sum_probs=141.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCCCCcEEEccCCCcccHHHHhc-------CC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGGADDLFIGDIRDSNSIIPAIQ-------GI  148 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~~~~~v~~Dl~d~~~~~~~l~-------~~  148 (331)
                      -++|++|||||+++||++++++|+++  |++|++++|++++.++    +......+.+|+.+.+.+.+...       ..
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence            35789999999999999999999999  9999999999876554    44567888899998776665543       57


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc----------CCCeEEEEccCCCCCCC
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA----------GAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~vk~~v~~SS~~~~~~~  218 (331)
                      |.++++++................+..   .....+++|+.++..+.+++...          +-.+||++||..+..+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLE---DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHH---HHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             cccccccccccCCCcccccccccchHH---HHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            999998876443221000000111111   11234478888888887776432          23379999999875432


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCcc----ccCCcccccCHHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDE----LLQTETRTIARADVA  287 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~----~~~~~~~~i~v~Dva  287 (331)
                      ..     ...|..+|...+.+.+       .+|++++.|.||++..+....  ........    ++- ...+..++|+|
T Consensus       158 ~~-----~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~--~~~~~~~~~~~~~pl-~~R~g~peevA  229 (248)
T d2o23a1         158 VG-----QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS--LPEKVCNFLASQVPF-PSRLGDPAEYA  229 (248)
T ss_dssp             TT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSS-SCSCBCHHHHH
T ss_pred             CC-----chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc--CCHHHHHHHHhcCCC-CCCCcCHHHHH
Confidence            22     2569999999987766       478999999999997664221  10111111    110 02356899999


Q ss_pred             HHHHHHhcCcccCCceEEe
Q 046297          288 EVCIQALQFEEAKFKAFDL  306 (331)
Q Consensus       288 ~~~~~~l~~~~~~~~~~~i  306 (331)
                      ++++.+++++-..|++.+|
T Consensus       230 ~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         230 HLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHHCTTCCSCEEEE
T ss_pred             HHHHHHHhCCCCCceEeEC
Confidence            9999988754455666654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.74  E-value=3.3e-18  Score=150.79  Aligned_cols=212  Identities=10%  Similarity=0.004  Sum_probs=138.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhc----
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQ----  146 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~----  146 (331)
                      +-++|++|||||+|+||++++++|+++  |++|++++|+.++.++.        .....++.+|++|++.+.++++    
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            456799999999999999999999999  99999999997654432        2447789999999998877664    


Q ss_pred             ---CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHH----HH-cCCCeEEEEccCCCCCCC
Q 046297          147 ---GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAA----KA-AGAKQIVLVGSMGGTNLN  218 (331)
Q Consensus       147 ---~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa----~~-~~vk~~v~~SS~~~~~~~  218 (331)
                         ++|++|||||.......  ......++       .....+|..+...+...+    .. .+...++.++|..+....
T Consensus       100 ~~g~iDilvnnAg~~~~~~~--~~~~~~~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~  170 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPT--ERLSPNAW-------KTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS  170 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCG--GGCCHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC
T ss_pred             hccccchhhhhhhhcccccc--ccchhhhh-------hhheeeecccchhhhhhhhcccccccccccccccccchhhhcc
Confidence               68999999997543210  01111111       122255555544443332    22 234467777776543222


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh-----hhhccCCccccCCcccccCHHHH
Q 046297          219 HPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR-----ELLVGKDDELLQTETRTIARADV  286 (331)
Q Consensus       219 ~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~i~v~Dv  286 (331)
                      .     ....|..+|...+.+.+       ..|+++++|.||++..+.....     .........++-  ..+..++|+
T Consensus       171 ~-----~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl--~R~~~pedi  243 (294)
T d1w6ua_         171 G-----FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC--GRLGTVEEL  243 (294)
T ss_dssp             T-----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT--SSCBCHHHH
T ss_pred             c-----ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC--CCCCCHHHH
Confidence            1     12469999999887766       4689999999999976542110     000000001111  235689999


Q ss_pred             HHHHHHHhcCcc--cCCceEEecc
Q 046297          287 AEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       287 a~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |+++..++.+..  -.|+++.+.+
T Consensus       244 A~~v~fL~sd~s~~itG~~i~vDG  267 (294)
T d1w6ua_         244 ANLAAFLCSDYASWINGAVIKFDG  267 (294)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhcCCCCcEEEECC
Confidence            999999997654  5788999887

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=6.4e-17  Score=137.82  Aligned_cols=200  Identities=10%  Similarity=-0.012  Sum_probs=132.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh-------c--CCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI-------Q--GIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l-------~--~~d~Vi  152 (331)
                      .|+||||||+|+||+++++.|+++  |++|++++|++.+...   ....+..|..+.+......       .  ++|++|
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lI   76 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEAS---ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL   76 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTSS---EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcccccc---ccceeecccCcHHHHHHHHHHHHHHhCCCCceEEE
Confidence            689999999999999999999999  9999999987654221   1233445555444333222       2  489999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHH
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNIL  230 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~  230 (331)
                      ||||....... .+....++++       ..+++|+.+...+.+++..+  +-.++|++||..+..+...     ...|.
T Consensus        77 nnAG~~~~~~~-~~~~~~~~~~-------~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~-----~~~Y~  143 (236)
T d1dhra_          77 CVAGGWAGGNA-KSKSLFKNCD-------LMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG-----MIGYG  143 (236)
T ss_dssp             ECCCCCCCBCT-TCTTHHHHHH-------HHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----BHHHH
T ss_pred             ECCcccccccc-hhcCCHHHHH-------HHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC-----CcccH
Confidence            99995433211 1111112222       33488998888877777543  2258999999877543322     25699


Q ss_pred             HHHHHHHHHHHh---------cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--c
Q 046297          231 VWKRKAEQYLAD---------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--A  299 (331)
Q Consensus       231 ~sK~~~e~~~~~---------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~  299 (331)
                      .+|..++.+.+.         .+++++.|.||++..+...  .. ...     ...-.++..+|+|+.+..++....  .
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~--~~-~~~-----~~~~~~~~pe~va~~~~~l~s~~~~~i  215 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR--KS-MPE-----ADFSSWTPLEFLVETFHDWITGNKRPN  215 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH--HH-STT-----SCGGGSEEHHHHHHHHHHHHTTTTCCC
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch--hh-Ccc-----chhhcCCCHHHHHHHHHHHhCCCccCC
Confidence            999999988762         4799999999999776321  11 111     012346789999999999987653  4


Q ss_pred             CCceEEec
Q 046297          300 KFKAFDLA  307 (331)
Q Consensus       300 ~~~~~~i~  307 (331)
                      .|..+.+.
T Consensus       216 ~G~~i~v~  223 (236)
T d1dhra_         216 SGSLIQVV  223 (236)
T ss_dssp             TTCEEEEE
T ss_pred             CCCeEEEE
Confidence            56555553

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.5e-16  Score=138.54  Aligned_cols=187  Identities=17%  Similarity=0.118  Sum_probs=129.1

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-------CCCCcEEEccCCCcccHHHHhc-------CCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-------GGADDLFIGDIRDSNSIIPAIQ-------GID  149 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-------~~~~~~v~~Dl~d~~~~~~~l~-------~~d  149 (331)
                      .+|||||+++||.+++++|++++ |++|++.+|++++.++.       ..++.++++|++|.++++++++       ++|
T Consensus         5 VAlVTGas~GIG~a~A~~la~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           5 VALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            34899999999999999999853 89999999998765432       3458899999999999887764       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCC----------
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNL----------  217 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~----------  217 (331)
                      ++|||||.......         ++...++-...+++|+.|+..+.+++...  .-.++|++||..+...          
T Consensus        84 iLVnNAGi~~~~~~---------~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~  154 (275)
T d1wmaa1          84 VLVNNAGIAFKVAD---------PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQ  154 (275)
T ss_dssp             EEEECCCCCCCTTC---------CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             EEEEcCCcCCCCCc---------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhh
Confidence            99999997543211         11111111234488999998888887542  1248999999643100          


Q ss_pred             --------------------------CCCCCCCCcchHHHHHHHHHHHHH--------h---cCCCEEEEecCcccCCCc
Q 046297          218 --------------------------NHPLNSLGNGNILVWKRKAEQYLA--------D---SGIPYTIIRAGGLQDKEG  260 (331)
Q Consensus       218 --------------------------~~~~~~~~~~~y~~sK~~~e~~~~--------~---~~~~~~ilrp~~v~g~~~  260 (331)
                                                .......+...|..+|.....+.+        +   .++.++.+.||++..+..
T Consensus       155 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~  234 (275)
T d1wmaa1         155 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  234 (275)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc
Confidence                                      011112223569999988664432        1   489999999999976642


Q ss_pred             chhhhhccCCccccCCcccccCHHHHHHHHHHHhc
Q 046297          261 GIRELLVGKDDELLQTETRTIARADVAEVCIQALQ  295 (331)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  295 (331)
                      .               .....+++|.|+.++.+..
T Consensus       235 ~---------------~~~~~~pee~A~~~~~~a~  254 (275)
T d1wmaa1         235 G---------------PKATKSPEEGAETPVYLAL  254 (275)
T ss_dssp             C---------------TTCSBCHHHHTHHHHHHHS
T ss_pred             c---------------CcccCCHHHHHHHHHHHHc
Confidence            1               1123468999998888654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.68  E-value=7.7e-17  Score=137.22  Aligned_cols=199  Identities=9%  Similarity=0.031  Sum_probs=130.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh---------cCCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI---------QGIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l---------~~~d~Vi~  153 (331)
                      .|||||||+|+||++++++|+++  |++|++++|+++...   .....+.+|..+.+......         .++|+|||
T Consensus         3 gkVlITGas~GIG~aia~~l~~~--G~~V~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin   77 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQA---DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   77 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTS---SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCchhcc---cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence            57999999999999999999999  999999999875422   12334455665444333222         25899999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHH
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILV  231 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~  231 (331)
                      |||......+     ...++...|   ..++++|+.++..+.+++..+  +-.++|++||..+..+...     ...|..
T Consensus        78 nAG~~~~~~~-----~~~~~~~~~---~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~-----~~~Y~a  144 (235)
T d1ooea_          78 VAGGWAGGSA-----SSKDFVKNA---DLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS-----MIGYGM  144 (235)
T ss_dssp             CCCCCCCBCT-----TSTTHHHHH---HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----BHHHHH
T ss_pred             CCcccccccc-----cccCcHHHH---hhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc-----ccchHH
Confidence            9996433211     011111111   223488998888877777543  2258999999876543321     257999


Q ss_pred             HHHHHHHHHHh---------cCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc---c
Q 046297          232 WKRKAEQYLAD---------SGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEE---A  299 (331)
Q Consensus       232 sK~~~e~~~~~---------~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~  299 (331)
                      +|..++.+.+.         .+++++.+.||++..+..  ...+.+.      ....++..+|+++.++..+..+.   .
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~--~~~~~~~------~~~~~~~~~~va~~~~~~l~~~~~~~~  216 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN--RKWMPNA------DHSSWTPLSFISEHLLKWTTETSSRPS  216 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH--HHHSTTC------CGGGCBCHHHHHHHHHHHHHCGGGCCC
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcch--hhhCcCC------ccccCCCHHHHHHHHHHHhcCccccCC
Confidence            99999987762         366788899999865431  2222111      12346889999999887665543   3


Q ss_pred             CCceEEec
Q 046297          300 KFKAFDLA  307 (331)
Q Consensus       300 ~~~~~~i~  307 (331)
                      .|..+.+.
T Consensus       217 tG~~i~v~  224 (235)
T d1ooea_         217 SGALLKIT  224 (235)
T ss_dssp             TTCEEEEE
T ss_pred             CceEEEEE
Confidence            56666664

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.3e-16  Score=138.49  Aligned_cols=193  Identities=16%  Similarity=0.153  Sum_probs=132.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC--------CCCcEEEccCCCcccHHHHhc-----
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG--------GADDLFIGDIRDSNSIIPAIQ-----  146 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~--------~~~~~v~~Dl~d~~~~~~~l~-----  146 (331)
                      .++|++|||||+++||++++++|+++  |++|++++|++++++++.        .....+.+|+.+.+.+...++     
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~--G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            35789999999999999999999999  999999999987765531        236788899988877665543     


Q ss_pred             --CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCC
Q 046297          147 --GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHP  220 (331)
Q Consensus       147 --~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~  220 (331)
                        .+|++++|||.......  .       +...++....+++|+.+...+.++    +++.+ .++|++||..+..+...
T Consensus        90 ~g~~~~li~nag~~~~~~~--~-------~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~~~~p~  159 (269)
T d1xu9a_          90 MGGLDMLILNHITNTSLNL--F-------HDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPM  159 (269)
T ss_dssp             HTSCSEEEECCCCCCCCCC--C-------CSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCCTT
T ss_pred             hCCcccccccccccccccc--c-------cCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhcCCCCC
Confidence              68999999987443211  1       111112233448888776555544    44433 68999999876433321


Q ss_pred             CCCCCcchHHHHHHHHHHHHH---------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHHHHHHHHH
Q 046297          221 LNSLGNGNILVWKRKAEQYLA---------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       221 ~~~~~~~~y~~sK~~~e~~~~---------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                           ...|..+|+.++.+.+         ..+++++.+.||++-.+..  .....+..      .....+.+++|+.++
T Consensus       160 -----~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~--~~~~~~~~------~~~~~~~e~~a~~i~  226 (269)
T d1xu9a_         160 -----VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA--MKAVSGIV------HMQAAPKEECALEII  226 (269)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH--HHHSCGGG------GGGCBCHHHHHHHHH
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH--HHhccCCc------cccCCCHHHHHHHHH
Confidence                 2579999999876554         2468899999999965421  11111111      123467899999998


Q ss_pred             HHhcCc
Q 046297          292 QALQFE  297 (331)
Q Consensus       292 ~~l~~~  297 (331)
                      ..+...
T Consensus       227 ~~~~~~  232 (269)
T d1xu9a_         227 KGGALR  232 (269)
T ss_dssp             HHHHTT
T ss_pred             HHhhcC
Confidence            876543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.67  E-value=2.6e-16  Score=134.24  Aligned_cols=206  Identities=16%  Similarity=0.081  Sum_probs=135.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc------CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ------GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~------~~d~Vi~~a  155 (331)
                      +|++|||||+++||++++++|+++  |++|++++|+++..     +...+++|+.+......+..      ..+.+++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRREGE-----DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   73 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCCSS-----SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcccc-----cceEeeccccchhhhHHHHHhhhccccccchhhhh
Confidence            478999999999999999999999  99999999987643     35678899998776665553      456666666


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHH----------cCCCeEEEEccCCCCCCCCCCCCCC
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKA----------AGAKQIVLVGSMGGTNLNHPLNSLG  225 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~----------~~vk~~v~~SS~~~~~~~~~~~~~~  225 (331)
                      +....... ...    ......+.....+++|+.+...+...+..          .+-.++|++||..+..+...     
T Consensus        74 ~~~~~~~~-~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~-----  143 (241)
T d1uaya_          74 GVGLAEKI-LGK----EGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-----  143 (241)
T ss_dssp             CCCCCCCS-BCS----SSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT-----
T ss_pred             hccccccc-ccc----ccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC-----
Confidence            54322110 000    00111111122346777776666555432          23348999999876443322     


Q ss_pred             cchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-----hhhhhccCCccccCCcccccCHHHHHHHHHHH
Q 046297          226 NGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-----IRELLVGKDDELLQTETRTIARADVAEVCIQA  293 (331)
Q Consensus       226 ~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  293 (331)
                      ...|..+|..++.+.+       .+|++++.|.||++..+...     .......+   .+- ...+..++|+|++++.+
T Consensus       144 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~---~~~-~~R~g~pedvA~~v~fL  219 (241)
T d1uaya_         144 QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQ---VPF-PPRLGRPEEYAALVLHI  219 (241)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTT---CCS-SCSCCCHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhc---CCC-CCCCcCHHHHHHHHHHH
Confidence            2569999999987765       47899999999999765321     11111111   110 01246899999999999


Q ss_pred             hcCcccCCceEEecc
Q 046297          294 LQFEEAKFKAFDLAS  308 (331)
Q Consensus       294 l~~~~~~~~~~~i~~  308 (331)
                      +.+.-..|+++.+.+
T Consensus       220 ~s~~~iTG~~i~VDG  234 (241)
T d1uaya_         220 LENPMLNGEVVRLDG  234 (241)
T ss_dssp             HHCTTCCSCEEEEST
T ss_pred             HhCCCCCCCEEEECC
Confidence            875546789999987

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.66  E-value=1.6e-15  Score=132.42  Aligned_cols=217  Identities=13%  Similarity=-0.016  Sum_probs=131.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhc--------CCCC-----------------cEEEccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKI--------GGAD-----------------DLFIGDI  135 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l--------~~~~-----------------~~v~~Dl  135 (331)
                      ++.+|||||+++||++++++|+++  |++|++.+|+.++ .+.+        ....                 ....+|+
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv   79 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   79 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccC
Confidence            456899999999999999999999  9999998876532 2211        1122                 2345668


Q ss_pred             CCcccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccc-------cCCCcceehHHHHHHHHHHHHH-
Q 046297          136 RDSNSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFE-------EGAYPEQVDWIGQKNQIDAAKA-  200 (331)
Q Consensus       136 ~d~~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~-------~~~~~~~~nv~~~~~ll~aa~~-  200 (331)
                      ++.++++++++       ++|++|||||......  +......+++....       .....+.+|+.+...+.+++.+ 
T Consensus        80 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  157 (284)
T d1e7wa_          80 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP--LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  157 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC--CCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCc--hhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence            88887777664       7999999999754321  11111111111000       0001235566666666665432 


Q ss_pred             ---------cCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhh
Q 046297          201 ---------AGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRE  264 (331)
Q Consensus       201 ---------~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~  264 (331)
                               .+...+|.++|.....+...     ...|..+|...+.+.+       .+|++++.|.||++.........
T Consensus       158 ~~~~~~~~~~~~~~ii~~~s~~~~~~~~~-----~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~  232 (284)
T d1e7wa_         158 VAGTPAKHRGTNYSIINMVDAMTNQPLLG-----YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPA  232 (284)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCTT-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHH
T ss_pred             hhhhHHHhcCCCCcccccccccccCCccc-----eeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHH
Confidence                     12346787777765433222     2569999999887765       47999999999975332221111


Q ss_pred             hhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          265 LLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       265 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      .........+- ...+...+|+|++++.++.+..  ..|+++.+.+
T Consensus       233 ~~~~~~~~~pl-~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG  277 (284)
T d1e7wa_         233 VWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  277 (284)
T ss_dssp             HHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhcCCC-CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence            11111111111 0135689999999999987654  4788999987

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=3.1e-16  Score=135.22  Aligned_cols=214  Identities=13%  Similarity=0.086  Sum_probs=139.7

Q ss_pred             CCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCchhhh------cCCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEESKQK------IGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~------l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ++|+||||||+|  +||+++++.|+++  |++|++.+|+++..+.      .......+..|+.+..++.+.++      
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            478999999999  8999999999999  9999999998654332      13357888999998887776664      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCcc-ccccCCCcceehHHHHHHHHHHHHHc--CCCeEEEEccCCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEF-YFEEGAYPEQVDWIGQKNQIDAAKAA--GAKQIVLVGSMGGTNLNHPLN  222 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~nv~~~~~ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~  222 (331)
                       ..|++||+++.......     .....+. ..+......++|+.+...+.+++...  +-+.+|++||.++..+...  
T Consensus        82 ~~~d~~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~--  154 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQL-----DGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN--  154 (258)
T ss_dssp             SSEEEEEECCCCCCGGGG-----SSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT--
T ss_pred             cccceEEEeecccccccc-----cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCC--
Confidence             57999999987543211     0000000 00001112244444555555555432  2236888888775433221  


Q ss_pred             CCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHH
Q 046297          223 SLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCI  291 (331)
Q Consensus       223 ~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~  291 (331)
                       +  ..|..+|...+.+.+       .+|+++++|+||++..+.....    ..........|-  ..+..++|+|.+++
T Consensus       155 -~--~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl--~R~~~peeia~~v~  229 (258)
T d1qsga_         155 -Y--NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--RRTVTIEDVGNSAA  229 (258)
T ss_dssp             -T--THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT--SSCCCHHHHHHHHH
T ss_pred             -c--HHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCC--CCCcCHHHHHHHHH
Confidence             1  459999999987766       3689999999999987653210    011111111121  23678999999999


Q ss_pred             HHhcCcc--cCCceEEecc
Q 046297          292 QALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       292 ~~l~~~~--~~~~~~~i~~  308 (331)
                      .++.+..  -.|+++.+.+
T Consensus       230 fL~s~~s~~itG~~i~vDG  248 (258)
T d1qsga_         230 FLCSDLSAGISGEVVHVDG  248 (258)
T ss_dssp             HHTSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCccCceEEECc
Confidence            9997653  5788898887

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.62  E-value=2.4e-15  Score=130.70  Aligned_cols=214  Identities=9%  Similarity=0.019  Sum_probs=130.6

Q ss_pred             CCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCchhhh------cCCCCcEEEccCCCcccHHHHhc------
Q 046297           81 AKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEESKQK------IGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        81 ~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~------l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      ++|++|||||+|  +||+++++.|+++  |++|++++|+++..+.      ......++.+|+.+++++.++++      
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            578999999887  7999999999999  9999999998643222      13457889999999988877764      


Q ss_pred             -CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc-CCCe-EEEEccCCCCCCCCCCCC
Q 046297          147 -GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA-GAKQ-IVLVGSMGGTNLNHPLNS  223 (331)
Q Consensus       147 -~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~vk~-~v~~SS~~~~~~~~~~~~  223 (331)
                       ++|++|||+|.......     ....+...+.........+..........+.+. +-.. ++.+|+.+.....     
T Consensus        82 g~id~lV~nag~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~-----  151 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEAL-----EGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM-----  151 (274)
T ss_dssp             SCEEEEEECCCCCCGGGG-----SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----
T ss_pred             CCCCeEEeeccccccccc-----ccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc-----
Confidence             68999999997544211     000000000000000011111122222222222 2223 4444444432221     


Q ss_pred             CCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchh----hhhccCCccccCCcccccCHHHHHHHHHH
Q 046297          224 LGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIR----ELLVGKDDELLQTETRTIARADVAEVCIQ  292 (331)
Q Consensus       224 ~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  292 (331)
                      .....|..+|...+.+.+       .+|+++++|.||++..+.....    ..........+  ...+..++|+|.+++.
T Consensus       152 ~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~~r~~~pedIA~~v~f  229 (274)
T d2pd4a1         152 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAP--LRKNVSLEEVGNAGMY  229 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST--TSSCCCHHHHHHHHHH
T ss_pred             ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhh--ccCCcCHHHHHHHHHH
Confidence            112568999999887765       4789999999999987643210    00000000011  1235789999999999


Q ss_pred             HhcCcc--cCCceEEecc
Q 046297          293 ALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       293 ~l~~~~--~~~~~~~i~~  308 (331)
                      ++.+..  ..|+++.+.+
T Consensus       230 L~S~~s~~itG~~i~vDG  247 (274)
T d2pd4a1         230 LLSSLSSGVSGEVHFVDA  247 (274)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhChhhCCCcCceEEECC
Confidence            987654  5788898887

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.62  E-value=9.7e-15  Score=126.12  Aligned_cols=218  Identities=14%  Similarity=0.038  Sum_probs=125.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hh----c----CCCCcEEEccCCCcc----cHHHHh----
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QK----I----GGADDLFIGDIRDSN----SIIPAI----  145 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~----l----~~~~~~v~~Dl~d~~----~~~~~l----  145 (331)
                      ++.|||||+++||++++++|+++  |++|++++|+.++. ++    +    ......++.|..+..    .+.+++    
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~--G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHH
Confidence            45899999999999999999999  99999999987543 21    1    233556666665433    233322    


Q ss_pred             ---cCCCEEEEcccCCCCCCCC-CCCCCCCCCccccc-cCCCcceehHHHHHHHHHHHHH---------cCCCeEEEEcc
Q 046297          146 ---QGIDALIILTSAVPKMKPD-FDPAKGGRPEFYFE-EGAYPEQVDWIGQKNQIDAAKA---------AGAKQIVLVGS  211 (331)
Q Consensus       146 ---~~~d~Vi~~ag~~~~~~~~-~~~~~~~~p~~~~~-~~~~~~~~nv~~~~~ll~aa~~---------~~vk~~v~~SS  211 (331)
                         .++|++|||||........ .....+.......+ ........|..+..........         .....++.+++
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence               3699999999975442210 00001111111000 0000011122222222222221         11235566666


Q ss_pred             CCCCCCCCCCCCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccCCccccCCcccccCHH
Q 046297          212 MGGTNLNHPLNSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARA  284 (331)
Q Consensus       212 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~  284 (331)
                      ..+.....     ....|..+|...+.+.+       +.|++++.|.||++..+..............++- ++.+..++
T Consensus       160 ~~~~~~~~-----~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl-~r~~~~pe  233 (266)
T d1mxha_         160 AMTDLPLP-----GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPL-GQSEASAA  233 (266)
T ss_dssp             GGGGSCCT-----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTT-TSCCBCHH
T ss_pred             ccccccCc-----chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCC-CCCCCCHH
Confidence            55422221     12569999999887765       4789999999999876644322221111111111 13346899


Q ss_pred             HHHHHHHHHhcCcc--cCCceEEecc
Q 046297          285 DVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       285 Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      |+|.+++.++.+..  ..|+++.+.+
T Consensus       234 eva~~v~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         234 QIADAIAFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhCchhCCccCCeEEECc
Confidence            99999999998754  4788999987

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.58  E-value=5.6e-15  Score=127.89  Aligned_cols=217  Identities=11%  Similarity=0.028  Sum_probs=130.0

Q ss_pred             CCCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCchhh-----hcCCCCcEEEccCCCcccHHHHhc------
Q 046297           80 MAKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEESKQ-----KIGGADDLFIGDIRDSNSIIPAIQ------  146 (331)
Q Consensus        80 ~~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-----~l~~~~~~v~~Dl~d~~~~~~~l~------  146 (331)
                      +++|++|||||+|  +||++++++|+++  |++|+++.|+.++..     .+......+++|+++++++.++++      
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            3578999999654  6999999999999  999999999876542     234458899999999876665543      


Q ss_pred             ----CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC-CCeEEEEccCCCCCCCCCC
Q 046297          147 ----GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG-AKQIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       147 ----~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-vk~~v~~SS~~~~~~~~~~  221 (331)
                          .+|+++||+|..+.......+.    .+..+........+|+.........+.... -..++.++|...... .|.
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-~p~  156 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPF----FDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-MPA  156 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCG----GGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-CTT
T ss_pred             ccCCCcceeeecccccCccccccccc----cccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc-Ccc
Confidence                4799999999654321100000    000010001111223333333333333221 223444444443222 221


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcc-h------------hhhhcc-CCccccCCcccc
Q 046297          222 NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGG-I------------RELLVG-KDDELLQTETRT  280 (331)
Q Consensus       222 ~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~-~------------~~~~~~-~~~~~~~~~~~~  280 (331)
                          ...|..+|...+.+.+       ..+++++.|.||.+..+... +            ...... ..... .-++.+
T Consensus       157 ----~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pl~rr~  231 (268)
T d2h7ma1         157 ----YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA-PIGWNM  231 (268)
T ss_dssp             ----THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC-TTCCCT
T ss_pred             ----cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC-CCCCCC
Confidence                1569999999887765       46899999999998754211 0            000000 00000 012346


Q ss_pred             cCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          281 IARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       281 i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ..++|+|++++.++.+..  ..|+++.+.+
T Consensus       232 ~~p~dva~~v~fL~Sd~a~~iTG~~i~vDG  261 (268)
T d2h7ma1         232 KDATPVAKTVCALLSDWLPATTGDIIYADG  261 (268)
T ss_dssp             TCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             CCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence            789999999999986543  4788888887

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.57  E-value=6.2e-15  Score=129.53  Aligned_cols=215  Identities=10%  Similarity=0.005  Sum_probs=129.3

Q ss_pred             cCCCCeEEEECCCC--hhHHHHHHHHHhcCCCCeEEEEecCCchhh-------------hcCC---CC---cEEEcc---
Q 046297           79 SMAKSTVLVTGAGG--RTGQIVYKKLKERSEQYAARGLVRTEESKQ-------------KIGG---AD---DLFIGD---  134 (331)
Q Consensus        79 ~~~~~~VlVtGatG--~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~-------------~l~~---~~---~~v~~D---  134 (331)
                      +.++|++|||||+|  +||+.++++|+++  |++|++..|++....             ....   ..   .....|   
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            45689999999987  8999999999999  999999998642110             0000   00   112222   


Q ss_pred             -----------------CCCcccHHHHh-------cCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHH
Q 046297          135 -----------------IRDSNSIIPAI-------QGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG  190 (331)
Q Consensus       135 -----------------l~d~~~~~~~l-------~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~  190 (331)
                                       ..+.+.+.+++       .++|++|||||........+...+.++++.       .+++|+.+
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~-------~~~vn~~~  155 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLA-------AISASSYS  155 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHH-------HHHHHTHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccc-------cccchhhh
Confidence                             12333333333       378999999997443222121222222222       33788888


Q ss_pred             HHHHHHHHHHcCC--CeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH--------hcCCCEEEEecCcccCCCc
Q 046297          191 QKNQIDAAKAAGA--KQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA--------DSGIPYTIIRAGGLQDKEG  260 (331)
Q Consensus       191 ~~~ll~aa~~~~v--k~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~~~~~ilrp~~v~g~~~  260 (331)
                      ...+.+++.....  +..+.+++........+.    ...|..+|..++.+.+        +++++++.|.||++..+..
T Consensus       156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~  231 (297)
T d1d7oa_         156 FVSLLSHFLPIMNPGGASISLTYIASERIIPGY----GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA  231 (297)
T ss_dssp             HHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTC----TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred             hhhhhhHHHHHhhcCCcceeeeehhhccccccc----ccceecccccccccccccchhccccceEEecccccccccchhh
Confidence            8888887764422  245555555432222211    1348888877665443        4689999999999987653


Q ss_pred             ch----hhhhccCCccccCCcccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          261 GI----RELLVGKDDELLQTETRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       261 ~~----~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                      ..    ...........|-  ..+...+|||++++.++.+..  ..|+++.+.+
T Consensus       232 ~~~~~~~~~~~~~~~~~Pl--gR~~~peevA~~v~fL~S~~a~~itGq~i~vDG  283 (297)
T d1d7oa_         232 KAIGFIDTMIEYSYNNAPI--QKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             SCCSHHHHHHHHHHHHSSS--CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhccCCHHHHHHHHhCCCC--CCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            21    1111111111121  135789999999999987643  4788888876

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.53  E-value=2e-13  Score=117.07  Aligned_cols=197  Identities=16%  Similarity=0.197  Sum_probs=117.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh--------cCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI--------QGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l--------~~~d~Vi~  153 (331)
                      ||.||||||+++||++++++|+++  |++|++++|++++          ...|+.+.+......        ..+|++++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~--Ga~V~~~~~~~~~----------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAE----------VIADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSS----------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECChHH----------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            577899999999999999999999  9999999997653          245777665544332        25899999


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHH----HHHcCCCeEEEEccCCCCCCCCCC--------
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDA----AKAAGAKQIVLVGSMGGTNLNHPL--------  221 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~vk~~v~~SS~~~~~~~~~~--------  221 (331)
                      |||.....             ..+   .....+|..+...+.+.    ..+........+++..........        
T Consensus        69 ~Ag~~~~~-------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          69 CAGLGPQT-------------KVL---GNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CCCCCTTC-------------SSH---HHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             cCCCCCcH-------------HHH---HHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhcc
Confidence            99863321             111   00113444554444443    344444556555554321110000        


Q ss_pred             ---------------CCCCcchHHHHHHHHHHHHH-------hcCCCEEEEecCcccCCCcchhhhhccC--CccccCC-
Q 046297          222 ---------------NSLGNGNILVWKRKAEQYLA-------DSGIPYTIIRAGGLQDKEGGIRELLVGK--DDELLQT-  276 (331)
Q Consensus       222 ---------------~~~~~~~y~~sK~~~e~~~~-------~~~~~~~ilrp~~v~g~~~~~~~~~~~~--~~~~~~~-  276 (331)
                                     .......|..+|...+.+.+       .+|++++.|.||++-.+....  .....  ...+... 
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~--~~~~~~~~~~~~~~~  210 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQA--GLQDPRYGESIAKFV  210 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CC
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHh--hcCCHHHHHHHHhcC
Confidence                           00011359999999987766       478999999999997654210  00000  0000000 


Q ss_pred             -c-ccccCHHHHHHHHHHHhcCcc--cCCceEEecc
Q 046297          277 -E-TRTIARADVAEVCIQALQFEE--AKFKAFDLAS  308 (331)
Q Consensus       277 -~-~~~i~v~Dva~~~~~~l~~~~--~~~~~~~i~~  308 (331)
                       + -.+..++|+|.+++.++.+..  -.|+++.+.+
T Consensus       211 ~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDG  246 (257)
T d1fjha_         211 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             CSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCC
Confidence             1 124688999999999987554  5688888876

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.51  E-value=7e-14  Score=124.52  Aligned_cols=163  Identities=13%  Similarity=0.060  Sum_probs=106.3

Q ss_pred             CCeEEEEC--CCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh-------------cCCC------CcEE---------
Q 046297           82 KSTVLVTG--AGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK-------------IGGA------DDLF---------  131 (331)
Q Consensus        82 ~~~VlVtG--atG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~-------------l~~~------~~~v---------  131 (331)
                      ++.+||||  ++.+||+.+++.|+++  |++|++..|+......             ....      ....         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~--GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA   79 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHc--CCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhh
Confidence            57799999  5579999999999999  9999998876432110             0000      1122         


Q ss_pred             -----------EccCCCcccHHHHhc-------CCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHH
Q 046297          132 -----------IGDIRDSNSIIPAIQ-------GIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKN  193 (331)
Q Consensus       132 -----------~~Dl~d~~~~~~~l~-------~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~  193 (331)
                                 .+|+.+.+.++++++       ++|++|||+|.......++......+++       ..+++|+.+...
T Consensus        80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~-------~~~~vn~~~~~~  152 (329)
T d1uh5a_          80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYL-------DALSKSSYSLIS  152 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHH-------HHHHHHTHHHHH
T ss_pred             cccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhh-------hhcccchhHHHH
Confidence                       235566666665543       7999999999754432222222222222       334778888777


Q ss_pred             HHHHHHHc--CCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHH--------hcCCCEEEEecCcccC
Q 046297          194 QIDAAKAA--GAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLA--------DSGIPYTIIRAGGLQD  257 (331)
Q Consensus       194 ll~aa~~~--~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~~~~~ilrp~~v~g  257 (331)
                      +.+++...  .-.++|.+||.++.... |  .+. ..|+.+|..++.+.+        ++|++++.|.||.+-.
T Consensus       153 ~~k~~~~~m~~~GsIv~iss~~~~~~~-p--~y~-~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         153 LCKYFVNIMKPQSSIISLTYHASQKVV-P--GYG-GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             HHHHHGGGEEEEEEEEEEECGGGTSCC-T--TCT-TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             HHHHHHhhcccccccccceeehhcccc-c--ccc-hhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            77777653  22479999887754322 1  121 358899999886654        3699999999998865

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.30  E-value=1.4e-12  Score=106.78  Aligned_cols=77  Identities=14%  Similarity=0.063  Sum_probs=68.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC------CCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG------GADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~------~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      +..+|+|+||||+|+||+.+++.|+++  |++|++++|+.++.+++.      ..+.+..+|+.|.+.+.+++.++|+||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhh--ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            456899999999999999999999999  999999999987765532      236788999999999999999999999


Q ss_pred             EcccC
Q 046297          153 ILTSA  157 (331)
Q Consensus       153 ~~ag~  157 (331)
                      ||+|.
T Consensus        98 n~Ag~  102 (191)
T d1luaa1          98 TAGAI  102 (191)
T ss_dssp             ECCCT
T ss_pred             ecCcc
Confidence            99986

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.85  E-value=7.5e-09  Score=78.80  Aligned_cols=71  Identities=21%  Similarity=0.269  Sum_probs=62.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC--CCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      |+|+|+|+ |.+|+.+++.|.+.  |++|++++++++..+++..  +..++.+|..|++.+.++ ++++|+++.+..
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~--g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~   74 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG   74 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCC
Confidence            68999998 99999999999999  9999999999988766532  578999999999999887 578999998764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.60  E-value=2e-07  Score=70.65  Aligned_cols=71  Identities=20%  Similarity=0.293  Sum_probs=61.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      |+++|.|+ |.+|+++++.|.+.  |++|++++.+++..+++.. ....+.+|.++++.+.++ ++++|.|+-..+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~--g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHT--TCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcC
Confidence            46888886 99999999999999  9999999999988887654 467889999999999887 778999888775

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.35  E-value=2.7e-06  Score=65.03  Aligned_cols=112  Identities=13%  Similarity=0.025  Sum_probs=76.1

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh--cCCC--CcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK--IGGA--DDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~--l~~~--~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      ||.|+||+|.+|+.++-.|..++--.++++++.++.+...  +...  ..... ......+..+.++++|+||..+|...
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~-~~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVK-GYLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEE-EEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCC-eEEcCCChHHHhCCCCEEEECCCcCC
Confidence            7999999999999999999988322368888887654332  2221  11111 12235667788999999999999633


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      ..+.               ...+..+.|....+.+++.+++++.+-++.+-|
T Consensus        81 ~~g~---------------sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          81 KPGM---------------TRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CTTC---------------CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCC---------------CcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            3211               112223778999999999999998776665554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.26  E-value=1e-06  Score=69.71  Aligned_cols=72  Identities=21%  Similarity=0.247  Sum_probs=58.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC---CcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA---DDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~---~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .|+|+|.|| |++|+++++.|.++  ||+|++++|+.++...+..+   ......+..+.......+...|.++....
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~--g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            478999987 99999999999999  99999999999988876554   33444566666677777888898887654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.22  E-value=7.1e-06  Score=62.76  Aligned_cols=107  Identities=12%  Similarity=0.128  Sum_probs=72.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----------cCCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----------IGGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----------l~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      .+||.|+|+ |.+|+.++..|+.++-..+++++++++++.+.          ......+..+|+       +.++++|+|
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adiv   76 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADLV   76 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccEE
Confidence            578999996 99999999999998323689999998754321          122244455553       246899999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      +.++|.....+.               ...+....|....+.+++.+++++.+-++.+-|
T Consensus        77 vitag~~~~~g~---------------~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          77 VITAGAPQKPGE---------------SRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EECCCC-------------------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecccccCCCC---------------CHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            999986433211               112223668888899999999988776665544

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=1e-05  Score=61.72  Aligned_cols=105  Identities=10%  Similarity=0.061  Sum_probs=64.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcC--CCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERS--EQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~--~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      |++|.|+||||++|+.+++.|++++  |-.+++.+.++......... .-.....++.+.    ..++++|++|.+++. 
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~----~~~~~~DivF~a~~~-   75 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL----EALKALDIIVTCQGG-   75 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCH----HHHHTCSEEEECSCH-
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccch----hhhhcCcEEEEecCc-
Confidence            4689999999999999999988762  24467777766433222111 011111222222    246789999999862 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCCCCCCCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGTNLNHPL  221 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~~~~~~~  221 (331)
                                                    ...+.+.+.+.+.|.+ .+|=.||..=.+++.|.
T Consensus        76 ------------------------------~~s~~~~~~~~~~g~~~~VID~Ss~fR~~~dvpl  109 (146)
T d1t4ba1          76 ------------------------------DYTNEIYPKLRESGWQGYWIDAASSLRMKDDAII  109 (146)
T ss_dssp             ------------------------------HHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEE
T ss_pred             ------------------------------hHHHHhhHHHHhcCCCeecccCCcccccCCCCcE
Confidence                                          2256777777788875 34555555545555543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=9.5e-06  Score=61.91  Aligned_cols=111  Identities=18%  Similarity=0.142  Sum_probs=70.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhc-CCCCeEEEEecCCchhh---hcCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVRTEESKQ---KIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R~~~~~~---~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      |||.|+|++|.+|++++-.|..+ +...++..++..+....   .+.+ .......-+...+++ +.++++|+||.++|.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCH-HHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCc-cccCCCCEEEECCCc
Confidence            68999999999999999887644 33678999987642211   1111 111111112223334 468899999999997


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          158 VPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      ....+.               .-.+....|....+.+.+.+++++-+.++.+
T Consensus        80 ~~k~g~---------------~R~dl~~~N~~i~~~v~~~i~~~~p~aiviv  116 (145)
T d2cmda1          80 RRKPGM---------------DRSDLFNVNAGIVKNLVQQVAKTCPKACIGI  116 (145)
T ss_dssp             CCCTTC---------------CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             cCCCCc---------------chhhHHHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence            433211               1122236788889999999998876655443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.97  E-value=5e-05  Score=58.03  Aligned_cols=106  Identities=18%  Similarity=0.145  Sum_probs=71.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c-------CCCCcEEEccCCCcccHHHHhcCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I-------GGADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l-------~~~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      ..+||.|+|| |.+|++++..|+.++...+++++++++++.+.    +       .....+...|.       +.++++|
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD   76 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD   76 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence            3578999997 99999999999998333489999998765321    1       11233333332       4578999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +|+..+|.......        ..       .+....|....+.+++.+++++-+-++.+
T Consensus        77 vvvitag~~~~~~~--------~R-------~dl~~~N~~i~~~i~~~i~~~~p~a~~iv  121 (148)
T d1ldna1          77 LVVICAGANQKPGE--------TR-------LDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (148)
T ss_dssp             EEEECCSCCCCTTT--------CS-------GGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             eEEEecccccccCc--------ch-------hHHHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence            99999996433211        11       12236678888889999888876544443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.97  E-value=2.6e-06  Score=68.15  Aligned_cols=40  Identities=20%  Similarity=0.116  Sum_probs=36.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI  124 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l  124 (331)
                      |||.|+||+|.+|+.|++.|+++  ||+|++.+|++++.+.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHH
Confidence            67999999999999999999999  99999999998876554

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.94  E-value=4.9e-06  Score=66.25  Aligned_cols=72  Identities=24%  Similarity=0.234  Sum_probs=55.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccCCCcccHHHHh-----cCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDIRDSNSIIPAI-----QGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~a  155 (331)
                      +.+|||+||+|.+|...++.....  |++|++++|++++.+.+... ...+ .|..+++..+..+     +++|+|+++.
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~D~v  106 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNV  106 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEE-EETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCCHHHHHHHHhhhhhhh-cccccccHHHHHHHHhhcCCCceeEEec
Confidence            568999999999999999999999  99999999998876655432 3322 3555555444433     2699999999


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       107 G  107 (182)
T d1v3va2         107 G  107 (182)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.92  E-value=4.8e-05  Score=57.85  Aligned_cols=108  Identities=14%  Similarity=0.103  Sum_probs=68.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhh----c-------CCCCcEEEccCCCcccHHHHhcCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQK----I-------GGADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~----l-------~~~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      |||.|+||+|.+|+.++..|+.++.-.++.++++++..  .+.    +       ....+....--.|    .+.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence            68999999999999999999998222589999987532  111    1       1112221111111    24678999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +||.+||.......        +-       .+..+.|....+.+++..++++-+.++.+
T Consensus        77 vVVitAG~~~~~g~--------sR-------~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGM--------SR-------MDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTC--------CH-------HHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             EEEEecccccCCCC--------Ch-------hhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            99999996433211        11       11236688888888999988875555433

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.84  E-value=2.5e-05  Score=60.18  Aligned_cols=112  Identities=13%  Similarity=0.039  Sum_probs=72.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcC----------C-CCcEEEccCCCcccHHHHhcCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIG----------G-ADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~----------~-~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      .+||.|+|+ |.+|+.++..|..+  +. ++++++.++++.+...          . .....     .....+++++++|
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~--~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-----~~~~~~~~~~~ad   78 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-----AEYSYEAALTGAD   78 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-----EECSHHHHHTTCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhC--CCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-----ccCchhhhhcCCC
Confidence            578999997 99999999988887  54 8999988876543210          1 11111     1234567889999


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      +|+..+|.....+.         +.... ...+....|....+.+++.+++.+-+-++.+-|
T Consensus        79 iVvitag~~~~~g~---------~~~~~-tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          79 CVIVTAGLTKVPGK---------PDSEW-SRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEEECCSCSSCTTC---------CGGGC-CGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             eEEEecccccCCCC---------CCccc-chhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999987443211         00000 011223567888889999999888766655443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=1e-05  Score=63.77  Aligned_cols=72  Identities=25%  Similarity=0.271  Sum_probs=53.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh-----cCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI-----QGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~a  155 (331)
                      +.+|||+||+|.+|...++.+...  |++|+++++++++.+.+.+ ....+ .|.++++..+++.     +++|+|+++.
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~  105 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEML  105 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CCEEEEEecccccccccccccccc--CcccccccccccccccccccCcccc-cccccccHHHHhhhhhccCCceEEeecc
Confidence            568999999999999999999888  9999999998876655432 23322 3666655444332     2589999998


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       106 g  106 (174)
T d1yb5a2         106 A  106 (174)
T ss_dssp             H
T ss_pred             c
Confidence            7

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=0.00012  Score=56.18  Aligned_cols=70  Identities=21%  Similarity=0.306  Sum_probs=58.3

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh----hh-cCCCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK----QK-IGGADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~----~~-l~~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      +|+|.|. |-+|..+++.|.++  |++|+++..++++.    .. ...++.++.+|.+|++.+.++ ++++|+||-+..
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            5899997 99999999999999  99999999887542    22 245689999999999988766 468999998875

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.81  E-value=1.3e-05  Score=63.58  Aligned_cols=72  Identities=15%  Similarity=0.179  Sum_probs=54.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh-----cCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI-----QGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~a  155 (331)
                      +.+|||+||+|.+|...++.+...  |++|+++++++++.+.+.. ....+ .|..+++..+++.     +++|+|+++.
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~  102 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSL  102 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCCcccccchhhccc--cccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence            468999999999999999999888  9999999998877666544 23332 4555554333332     3699999999


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       103 g  103 (183)
T d1pqwa_         103 A  103 (183)
T ss_dssp             C
T ss_pred             c
Confidence            8

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.79  E-value=2.9e-05  Score=61.34  Aligned_cols=71  Identities=15%  Similarity=0.074  Sum_probs=53.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC---------CCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG---------ADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~---------~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      |+|.|+|| |.+|..++..|.++  ||+|++++|++++.+.+..         .............++.++++++|+||.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            78999997 99999999999999  9999999999876655321         122222222223457888999999998


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      +..
T Consensus        79 ~v~   81 (184)
T d1bg6a2          79 VVP   81 (184)
T ss_dssp             CSC
T ss_pred             EEc
Confidence            763

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=0.00015  Score=50.62  Aligned_cols=69  Identities=16%  Similarity=0.182  Sum_probs=52.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc--hhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE--SKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~--~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .+++|+|.|. |..|..+++.|.++  |++|++.+.+..  ..+.+.....++.+... .    ..+.++|.||..-|.
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~--g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~d~vi~SPGi   74 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLAR--GVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-D----EWLMAADLIVASPGI   74 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHT--TCCCEEEESSSSCTTGGGSCTTSCEEESBCC-H----HHHHHCSEEEECTTS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHC--CCEEEEeeCCcCchhHHHHhhccceeecccc-h----hhhccCCEEEECCCC
Confidence            4688999997 99999999999999  999999998654  33445555666655532 1    345678999998775

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.77  E-value=9.4e-05  Score=55.89  Aligned_cols=105  Identities=14%  Similarity=0.104  Sum_probs=70.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----------cCCCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----------IGGADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----------l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      |||.|+|+ |.+|+.++..|+.++...++.++++++++.+.          +.....+..+|   .    +.++++|+|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence            68999997 99999999999988434689999988755432          12223333322   2    3478999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      ..+|.....+.       .        ..+....|..-.+.+++.+++.+-+-++.+-
T Consensus        73 itag~~~~~g~-------~--------r~dl~~~N~~I~~~i~~~i~~~~p~aivivv  115 (140)
T d1a5za1          73 VAAGVPQKPGE-------T--------RLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (140)
T ss_dssp             ECCCCCCCSSC-------C--------HHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EecccccCCCc-------c--------hhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence            99997443211       0        0112255777788888888888766555543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.74  E-value=1.6e-05  Score=61.72  Aligned_cols=73  Identities=27%  Similarity=0.262  Sum_probs=57.3

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...+++|||+|+ |.+|+.+++.|.+.  |+ ++++..|+.++...+........   .+.+++.+.+..+|+||.+.+.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~--g~~~i~v~nRt~~ka~~l~~~~~~~~---~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGGEA---VRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTCEE---CCGGGHHHHHHTCSEEEECCSS
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhc--CCcEEEEEcCcHHHHHHHHHhhhccc---ccchhHHHHhccCCEEEEecCC
Confidence            446789999997 99999999999999  87 69999999877766544322222   2346788889999999999875

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=1.2e-05  Score=63.52  Aligned_cols=73  Identities=15%  Similarity=0.065  Sum_probs=55.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-----CCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-----GIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~a  155 (331)
                      +.+|||+||+|.+|..+++.+...  |.+|++.++++++.+.+.+ +.+.+ .|.++++..+++.+     ++|+|+.+.
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s~~k~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~  105 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDSV  105 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCEEEEEccccccchHHHHHHHHh--CCeEeecccchHHHHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCc
Confidence            468999999999999999999999  9999999999987665433 23322 47776654444332     589999998


Q ss_pred             cC
Q 046297          156 SA  157 (331)
Q Consensus       156 g~  157 (331)
                      |.
T Consensus       106 g~  107 (179)
T d1qora2         106 GR  107 (179)
T ss_dssp             CG
T ss_pred             cH
Confidence            74

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.73  E-value=0.00038  Score=50.25  Aligned_cols=91  Identities=18%  Similarity=0.051  Sum_probs=66.5

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhc--CCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKI--GGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l--~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+++|||+|| |.+|..-++.|++.  |.+|++++..... ...+  ..++.++..++.+.+     +.+++.|+.+.+
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~--ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~d-----l~~~~lv~~at~   81 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEA--GARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL-----LDSCWLAIAATD   81 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHT--TBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGG-----GTTCSEEEECCS
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeccCChHHHHHHhcCCceeeccCCCHHH-----hCCCcEEeecCC
Confidence            34789999996 99999999999999  9999998876543 2222  234777777765433     678888887764


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          157 AVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                                                    +-.-...+...|++.|+  +|++.
T Consensus        82 ------------------------------d~~~n~~i~~~a~~~~i--lVNv~  103 (113)
T d1pjqa1          82 ------------------------------DDTVNQRVSDAAESRRI--FCNVV  103 (113)
T ss_dssp             ------------------------------CHHHHHHHHHHHHHTTC--EEEET
T ss_pred             ------------------------------CHHHHHHHHHHHHHcCC--EEEeC
Confidence                                          22335678889998876  66654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.72  E-value=1.7e-05  Score=62.28  Aligned_cols=72  Identities=14%  Similarity=0.098  Sum_probs=52.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+|||+||+|.+|...++.+...  |++|+++++++++.+.+.. ..+.+ .|..+........+++|+|+++.|
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCEEEEEeccccchhhhhhhhccc--cccccccccccccccccccccccee-eehhhhhhhhhccccccccccccc
Confidence            568999999999999999999888  9999999998877655432 23322 244333322333458999999877

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=0.00012  Score=57.18  Aligned_cols=113  Identities=16%  Similarity=0.106  Sum_probs=66.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC----CCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG----ADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~----~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ..+++|||.|+ |+.+++++..|.+.  |.+|+++.|+.++.+.+..    ...+...++.+.     ...++|+|||+.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~--g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~T   87 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINAT   87 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhccc--ceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeeccc
Confidence            34789999996 99999999999999  8899999999877665422    122223333221     125789999997


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCcceehHHH-HHHHHHHHHHcCCCeE
Q 046297          156 SAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIG-QKNQIDAAKAAGAKQI  206 (331)
Q Consensus       156 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~-~~~ll~aa~~~~vk~~  206 (331)
                      ........      ...|...+......+++.+.- .-.+++.|++.|.+.+
T Consensus        88 p~G~~~~~------~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~  133 (170)
T d1nyta1          88 SSGISGDI------PAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRN  133 (170)
T ss_dssp             SCGGGTCC------CCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEE
T ss_pred             ccCcccCC------CCCcHHHhccCcEEEEeecCCCCCHHHHHHHHcCCCcc
Confidence            54322111      111111122222122322211 1258888898887554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.68  E-value=0.00013  Score=55.21  Aligned_cols=105  Identities=18%  Similarity=0.042  Sum_probs=68.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c-------CCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I-------GGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l-------~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      |||.|+|| |.+|+.++..|+.++...+++++++++++...    +       .....+...+  |.    +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH----HHhcCCeEE
Confidence            68999996 99999999999998433689999998865432    1       1113333221  12    357899999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +..+|.....+.        .-       .+....|..-.+.+++.+++++-+-++.+
T Consensus        74 vitag~~~~~g~--------~r-------~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          74 IITAGLPRKPGM--------TR-------EDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             EECCSCCCCTTC--------CH-------HHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             EEEEecCCCCCC--------ch-------HHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            999997433211        00       11125577777888888888775545443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=6.1e-05  Score=59.68  Aligned_cols=74  Identities=18%  Similarity=0.148  Sum_probs=59.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhc-------C--CCCcEEEccCCCcccHHHHhcCCCE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKI-------G--GADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l-------~--~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      .+++|+|.|+ |+.|+.++..|++.  |. ++++..|++++.+.+       .  -.......|+.+.+.+.+.+..+|+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~--g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIE--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhc--CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            4688999997 89999999999998  65 788999987655432       1  1244557888888888888999999


Q ss_pred             EEEcccC
Q 046297          151 LIILTSA  157 (331)
Q Consensus       151 Vi~~ag~  157 (331)
                      |||+...
T Consensus        94 iIN~Tp~  100 (182)
T d1vi2a1          94 LTNGTKV  100 (182)
T ss_dssp             EEECSST
T ss_pred             eccccCC
Confidence            9999864

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.66  E-value=0.00019  Score=54.47  Aligned_cols=102  Identities=17%  Similarity=0.171  Sum_probs=61.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcC--CCCeEEEEecCCchhhh--cCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERS--EQYAARGLVRTEESKQK--IGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~--~g~~V~~l~R~~~~~~~--l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      |||.|.||||++|+.+++.|++..  |..++..+..+....+.  .......+ .+..+    ...++++|+||.++.. 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~-~~~~~----~~~~~~~DvvF~alp~-   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGML-HDAFD----IESLKQLDAVITCQGG-   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBC-EETTC----HHHHTTCSEEEECSCH-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceee-ecccc----hhhhccccEEEEecCc-
Confidence            679999999999999999998741  23456655544322111  11111111 11112    2346889999999862 


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC-eEEEEccCCCCCCCCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK-QIVLVGSMGGTNLNHP  220 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk-~~v~~SS~~~~~~~~~  220 (331)
                                                    .-.+.+.+.+.+.|.+ .+|=.|+..=.+++.|
T Consensus        75 ------------------------------~~s~~~~~~l~~~g~~~~VIDlSsdfR~~~dvp  107 (147)
T d1mb4a1          75 ------------------------------SYTEKVYPALRQAGWKGYWIDAASTLRMDKEAI  107 (147)
T ss_dssp             ------------------------------HHHHHHHHHHHHTTCCSEEEESSSTTTTCTTEE
T ss_pred             ------------------------------hHHHHHhHHHHHcCCceEEEeCCccccccCCce
Confidence                                          1156777788888876 4555666654555444

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=1.5e-05  Score=61.99  Aligned_cols=69  Identities=16%  Similarity=0.248  Sum_probs=48.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---CCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---GADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |||+|+|+ |.+|..++..|.+.  ||+|++++|+++......   .+.......+  .....+.+..+|+|+.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESL--TANDPDFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEE--EESCHHHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHC--CCceEEEEcCHHHhhhhccccCCcccccccc--ccchhhhhcccceEEEeec
Confidence            78999998 99999999999999  999999999987654321   1111111111  1122345678999998874

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=1.5e-05  Score=63.02  Aligned_cols=70  Identities=14%  Similarity=0.148  Sum_probs=49.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc--CCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ--GIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag  156 (331)
                      ..|||+||+|.+|...++.....  |++|++++|++++.+.+.. ..+.+ .|..+.+. .+.+.  ..|.++++.|
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~~k~~~~~~lGad~v-i~~~~~~~-~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKSLGASRV-LPRDEFAE-SRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTEEEE-EEGGGSSS-CCSSCCCCEEEEEESSC
T ss_pred             CcEEEEEccccchHHHHHHHHHc--CCCeEEEecchhHHHHHHhhccccc-cccccHHH-HHHHHhhcCCeeEEEcc
Confidence            47999999999999999999999  9999999999888665433 22222 23333322 22232  3588888876

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.59  E-value=0.00024  Score=53.58  Aligned_cols=104  Identities=13%  Similarity=0.044  Sum_probs=67.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC--chhh-------h---cCCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE--ESKQ-------K---IGGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~--~~~~-------~---l~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      ||.|+||+|.+|+.++-.|+.++...++++++...  +...       +   +.....+..+|   .+    .++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YE----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GG----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HH----HhhhcCEE
Confidence            79999999999999999999984344788888542  2211       1   12223333333   22    35799999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +..||.......        +-       .+..+.|..-.+.+.+..++.+-+-++.+
T Consensus        75 vitaG~~~~~g~--------~R-------~dl~~~N~~I~~~i~~~i~~~~p~~i~iv  117 (142)
T d1o6za1          75 VITAGIPRQPGQ--------TR-------IDLAGDNAPIMEDIQSSLDEHNDDYISLT  117 (142)
T ss_dssp             EECCCCCCCTTC--------CH-------HHHHHHHHHHHHHHHHHHHTTCSCCEEEE
T ss_pred             EEecccccccCC--------ch-------hhHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            999996433211        00       11236678888889999988876655443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.59  E-value=7.2e-05  Score=58.12  Aligned_cols=63  Identities=19%  Similarity=0.161  Sum_probs=46.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CC-cEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-AD-DLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~-~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      |||.|.|. |.+|+.+++.|.++  ||+|++.+|+++..+.... ++ .... |      ..++++++|+||-+.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~--g~~V~~~d~~~~~~~~a~~~~~~~~~~-~------~~~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAG-Q------DLSLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEE-S------CGGGGTTCSEEEECS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHhhccceee-e------ecccccccccccccC
Confidence            67999985 99999999999999  9999999999876655322 22 1111 1      124678999998665

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.58  E-value=0.00044  Score=52.37  Aligned_cols=109  Identities=14%  Similarity=0.095  Sum_probs=69.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c-------CCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I-------GGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l-------~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      +||.|+|+ |.+|+.++-.|+.++-..+++++++++++.+.    +       .........|   .    +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence            68999995 99999999999998323589999988765322    1       1112333333   2    346899999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      |..||.......        .|..   ...+..+.|....+.+.+.+++++-+-++.+-
T Consensus        74 VitaG~~~~~~~--------~~g~---~R~~l~~~N~~i~~~i~~~i~~~~p~aivivv  121 (146)
T d1hyha1          74 ISTLGNIKLQQD--------NPTG---DRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (146)
T ss_dssp             EECCSCGGGTC------------------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEeccccccccc--------cCCc---cHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            999996432110        0000   01122356888888899999988766555544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.58  E-value=0.00031  Score=54.16  Aligned_cols=65  Identities=18%  Similarity=0.140  Sum_probs=51.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |||.|.| .|.+|+.+++.|+++  ||+|++.+|++++.+.+......+      .+...++++++|+|+-+..
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~------~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAAGAET------ASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEE------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHhhhhh------cccHHHHHhCCCeEEEEcC
Confidence            5799998 599999999999999  999999999998877764432222      2345677888999999875

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.57  E-value=4.2e-05  Score=58.91  Aligned_cols=106  Identities=15%  Similarity=0.071  Sum_probs=60.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCC-CC-e---EEEEe--cCCchhhhc----CCCCcEEEccCCCcccHHHHhcCCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSE-QY-A---ARGLV--RTEESKQKI----GGADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~-g~-~---V~~l~--R~~~~~~~l----~~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      .+||.|+||+|++|++++-.|+..+. +. .   ...+.  ++.++.+..    ..................+.++++|+
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adv   83 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY   83 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccE
Confidence            45899999999999999999998621 11 1   11222  222222211    11110011111123345678999999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG  202 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~  202 (331)
                      ||..+|.....+.        +...       ....|..-.+.+.+.+++..
T Consensus        84 ViitaG~~~~pg~--------~r~d-------l~~~N~~i~~~~~~~i~k~a  120 (154)
T d1y7ta1          84 ALLVGAAPRKAGM--------ERRD-------LLQVNGKIFTEQGRALAEVA  120 (154)
T ss_dssp             EEECCCCCCCTTC--------CHHH-------HHHHHHHHHHHHHHHHHHHS
T ss_pred             EEeecCcCCCCCC--------cHHH-------HHHHHHHHHHHHHHHHHHhC
Confidence            9999997443211        1111       12557777888888888753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=0.00029  Score=54.22  Aligned_cols=108  Identities=11%  Similarity=0.070  Sum_probs=70.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC------CCCcEEEccCCCcccHHHHhcCCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG------GADDLFIGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~------~~~~~v~~Dl~d~~~~~~~l~~~d  149 (331)
                      +...||.|+|+ |.+|..++..|+.++...+++++++++++...    +.      .....+..  .|.    +.++++|
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~----~~~~~ad   89 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDY----NVSANSK   89 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSG----GGGTTEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cch----hhhcccc
Confidence            44568999996 99999999999998434489999988754321    11      11122221  122    3467899


Q ss_pred             EEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          150 ALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       150 ~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +||..+|.......               ...+..+.|....+.+++.+++++-+-++.+
T Consensus        90 ivvitag~~~~~~~---------------~R~dll~~N~~i~~~i~~~i~~~~p~~iviv  134 (159)
T d2ldxa1          90 LVIITAGARMVSGQ---------------TRLDLLQRNVAIMKAIVPGVIQNSPDCKIIV  134 (159)
T ss_dssp             EEEECCSCCCCTTT---------------CSSCTTHHHHHHHHHHTTTHHHHSTTCEEEE
T ss_pred             EEEEecccccCCCC---------------CHHHHHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence            99999986443211               1122236688888888888888876655443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.54  E-value=0.00029  Score=54.46  Aligned_cols=40  Identities=13%  Similarity=0.150  Sum_probs=34.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI  124 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l  124 (331)
                      |++|.|.| .|.+|+.+++.|+++  ||+|++.+|++++.+.+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~--g~~v~~~d~~~~~~~~~   40 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGL   40 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHC--CCeEEEEECchhhhhhh
Confidence            46799997 699999999999999  99999999998765543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.53  E-value=0.00025  Score=54.15  Aligned_cols=41  Identities=17%  Similarity=0.295  Sum_probs=36.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK  123 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~  123 (331)
                      .+++|.|+||.|.+|+.+++.|.++  ||+|++.+|++....+
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~--G~~V~~~d~~~~~~~~   48 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWAVAE   48 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGGGHH
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHc--CCCcEecccccccccc
Confidence            4679999999999999999999999  9999999998765443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.53  E-value=0.00044  Score=52.28  Aligned_cols=96  Identities=23%  Similarity=0.289  Sum_probs=58.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhc-CCCCeEEEEecCCchhhhcCCCC-cEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVRTEESKQKIGGAD-DLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R~~~~~~~l~~~~-~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      .++|.|.||||++|+.+++.|.++ .|..++..+..+...-+.+.... .....++.+     ..+.++|+++.+++.  
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~-----~~~~~~d~vf~a~p~--   74 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDS-----FDFSSVGLAFFAAAA--   74 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGG-----CCGGGCSEEEECSCH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchh-----hhhccceEEEecCCc--
Confidence            478999999999999999999764 24567877765543322221111 111112111     224678999988752  


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~  214 (331)
                                                   .....+...+.+.|. ++|=.|+..=
T Consensus        75 -----------------------------~~s~~~~~~~~~~g~-~VID~Ss~fR   99 (144)
T d2hjsa1          75 -----------------------------EVSRAHAERARAAGC-SVIDLSGALE   99 (144)
T ss_dssp             -----------------------------HHHHHHHHHHHHTTC-EEEETTCTTT
T ss_pred             -----------------------------chhhhhccccccCCc-eEEeechhhc
Confidence                                         224556666677775 6766666653

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.53  E-value=0.00022  Score=51.42  Aligned_cols=69  Identities=13%  Similarity=0.162  Sum_probs=55.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALII  153 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~  153 (331)
                      ...||.|.|| |.+|+-++....+.  |+++++++.+++..... -.-+++.+|+.|.+.+.+...  ++|+|..
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~l--G~~v~v~d~~~~~PA~~-va~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRL--GVEVIAVDRYADAPAMH-VAHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTT--TCEEEEEESSTTCGGGG-GSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHC--CCEEEEEcCCCCCchhh-cCCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            3568999995 99999999999999  99999999986543221 114688899999999988774  5798853

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.52  E-value=0.00027  Score=53.39  Aligned_cols=106  Identities=12%  Similarity=-0.014  Sum_probs=69.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c------CCCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I------GGADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l------~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      .||.|+|+ |.+|++++..|+.++-..+++++++++++.+.    +      .....+...+     ++ +.++++|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~-----~~-~~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD-----DP-EICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES-----CG-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC-----CH-HHhhCCcEEE
Confidence            47999997 99999999999998434589999998755432    1      1112222221     12 3478899999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      ..+|.......        ..       .+....|..-.+.+++.+++++-+-++.+-
T Consensus        75 itaG~~~~~g~--------~R-------~dl~~~N~~i~~~i~~~i~~~~p~ai~ivv  117 (143)
T d1llda1          75 ITAGPRQKPGQ--------SR-------LELVGATVNILKAIMPNLVKVAPNAIYMLI  117 (143)
T ss_dssp             ECCCCCCCTTC--------CH-------HHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             EecccccCCCC--------ch-------hhhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            99997433211        11       112356787788888888888766555443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.51  E-value=6e-05  Score=57.12  Aligned_cols=104  Identities=17%  Similarity=0.132  Sum_probs=64.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cCC------CCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IGG------ADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~~------~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      +||.|+|+ |.+|+.++-.|+.++...+++++++++++.+.    +.+      ......+   +    .+.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~----~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---D----YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---c----HHHhCCCceEE
Confidence            57999997 99999999999998444589999988765321    211      1111111   1    23578999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      ..||......        .+..       +....|..-.+.+++.+++++-+-++.+
T Consensus        74 itag~~~~~~--------~~r~-------~l~~~N~~i~~~i~~~i~~~~p~ai~iv  115 (142)
T d1y6ja1          74 VTAGANRKPG--------ETRL-------DLAKKNVMIAKEVTQNIMKYYNHGVILV  115 (142)
T ss_dssp             ECCCC--------------CHH-------HHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             EecccccCcC--------cchh-------HHhhHHHHHHHHHHHHhhccCCCceEEE
Confidence            9998643321        1111       1226677778889999998876554443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.50  E-value=0.00022  Score=55.42  Aligned_cols=73  Identities=22%  Similarity=0.171  Sum_probs=51.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-C-CcEEEccCC--CcccHHHHh-----cCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-A-DDLFIGDIR--DSNSIIPAI-----QGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~-~~~v~~Dl~--d~~~~~~~l-----~~~d~Vi  152 (331)
                      +.+|+|+| +|.+|...++.+...  |.+|+++++++++.+...+ . ...+..|-.  +.+.+.+.+     .++|+||
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~--Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             CCEEEEEc-ccccchhhHhhHhhh--cccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceee
Confidence            46799997 699999999988888  9999999999888765432 2 223333333  223333333     2689999


Q ss_pred             EcccC
Q 046297          153 ILTSA  157 (331)
Q Consensus       153 ~~ag~  157 (331)
                      .++|.
T Consensus       104 d~~g~  108 (170)
T d1e3ja2         104 DCSGN  108 (170)
T ss_dssp             ECSCC
T ss_pred             ecCCC
Confidence            99984

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=5.2e-05  Score=50.82  Aligned_cols=40  Identities=23%  Similarity=0.361  Sum_probs=35.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK  123 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~  123 (331)
                      +.+|||+||+|.+|...++.+...  |++|+++++++++.+.
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~~k~~~   71 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEY   71 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHH
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCHHHHHH
Confidence            567999999999999999988888  9999999999877654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.45  E-value=0.00032  Score=52.90  Aligned_cols=107  Identities=11%  Similarity=0.010  Sum_probs=68.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----c-------CCCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----I-------GGADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l-------~~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      |||.|+|+ |.+|..++..|+.++.-.++.++++++++.+.    +       .....+...     .+. +.++++|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~-----~d~-~~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----ADY-SLLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SCG-GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC-----CCH-HHhccccEE
Confidence            68999996 99999999999988323479999988765332    1       111222221     111 367899999


Q ss_pred             EEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          152 IILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       152 i~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      +..+|.....+.        ....       ....|..-...+.+.+++++-+-++.+-|
T Consensus        74 vitag~~~~~g~--------~r~~-------l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          74 VVTAGLARKPGM--------TRLD-------LAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EECCCCCCCSSC--------CHHH-------HHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEeccccCCCCC--------chHH-------HHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            999986433211        1111       12557777788888888887665555443

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.44  E-value=0.00088  Score=50.42  Aligned_cols=104  Identities=13%  Similarity=0.031  Sum_probs=66.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC-------CCCcEEE-ccCCCcccHHHHhcCCCE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG-------GADDLFI-GDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~-------~~~~~v~-~Dl~d~~~~~~~l~~~d~  150 (331)
                      +||.|+|+ |.+|..++-.|+.++ -.++++++.+++....    +.       ....+.. .|+       +.++++|+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~-l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~adv   72 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKE-LGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDV   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCC-cceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCE
Confidence            68999996 999999999998872 2488899987765332    11       1122331 221       24678999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      ||.+||.....+.               ...+....|....+.+++..++++-+-++.+-
T Consensus        73 vvitag~~~~~~~---------------~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv  117 (142)
T d1uxja1          73 IVVTSGAPRKPGM---------------SREDLIKVNADITRACISQAAPLSPNAVIIMV  117 (142)
T ss_dssp             EEECCSCC------------------------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred             EEEeeeccCCcCc---------------chhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence            9999996433211               11222366788888999999888766555553

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.42  E-value=0.00012  Score=58.93  Aligned_cols=72  Identities=14%  Similarity=0.147  Sum_probs=53.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccC-------------CCcccHHHHhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDI-------------RDSNSIIPAIQGI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl-------------~d~~~~~~~l~~~  148 (331)
                      |+|.|.| .|++|..++..|.++  ||+|++++.++++.+.+..+ ..+.+.++             .-..++.++++++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~--g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~   77 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS   77 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhC--CCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhC
Confidence            6799997 599999999999999  99999999998877766432 21111111             1234466777899


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |+++.+.+.
T Consensus        78 d~i~i~VpT   86 (202)
T d1mv8a2          78 DVSFICVGT   86 (202)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEecCc
Confidence            999999874

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.42  E-value=6.2e-05  Score=59.25  Aligned_cols=73  Identities=21%  Similarity=0.220  Sum_probs=49.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCc-ccHHHHh--cCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDS-NSIIPAI--QGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~-~~~~~~l--~~~d~Vi~~ag~  157 (331)
                      ..+|||.||+|.+|...++.+...  |.+|++.++++++.+.+.. ..+.+ .|..+. +...+..  +++|+|+.+.|.
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~gvD~vid~vgg  108 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGG  108 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHHHHHHHhccccee-eecchhHHHHHHHhhccCcCEEEEcCCc
Confidence            457999999999999999999999  9999999999887665433 22222 133221 1222222  269999999983

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.41  E-value=6.3e-05  Score=58.72  Aligned_cols=66  Identities=20%  Similarity=0.227  Sum_probs=47.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .+++|+|.|+ |+.|++++..|.+.  |. +|.++.|+.++.+.+.........+..+       ..++|+|||+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~--g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~-------~~~~DliINaTp   82 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALYGYAYINSLE-------NQQADILVNVTS   82 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHHTCEEESCCT-------TCCCSEEEECSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHC--CCCEEEEecccHHHHHHHHHhhhhhhhhccc-------ccchhhheeccc
Confidence            3578999996 99999999999999  86 7999999988776654322222222111       146899998764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=6.5e-05  Score=60.04  Aligned_cols=73  Identities=15%  Similarity=0.106  Sum_probs=51.6

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC------------C-C----------cEEEccCCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG------------A-D----------DLFIGDIRD  137 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~------------~-~----------~~v~~Dl~d  137 (331)
                      .-++|.|.|| |.+|+.++..++.+  ||+|++++++++.++....            . .          .-...-+.-
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~   79 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT   79 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhC--CCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccc
Confidence            4578999997 99999999999999  9999999999865442110            0 0          000011222


Q ss_pred             cccHHHHhcCCCEEEEccc
Q 046297          138 SNSIIPAIQGIDALIILTS  156 (331)
Q Consensus       138 ~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..++.++++++|.|+-++.
T Consensus        80 ~~d~~~a~~~ad~ViEav~   98 (192)
T d1f0ya2          80 STDAASVVHSTDLVVEAIV   98 (192)
T ss_dssp             ESCHHHHTTSCSEEEECCC
T ss_pred             cchhHhhhcccceehhhcc
Confidence            3456678889999999974

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.39  E-value=0.00021  Score=55.07  Aligned_cols=107  Identities=12%  Similarity=0.059  Sum_probs=69.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhh----cC-----CCCcEEEccCCCcccHHHHhcCCCEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQK----IG-----GADDLFIGDIRDSNSIIPAIQGIDALI  152 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~----l~-----~~~~~v~~Dl~d~~~~~~~l~~~d~Vi  152 (331)
                      .+||.|+|+ |.+|+.++-.|+.++.--++++++++++....    +.     .....+... .|.    +.++++|+|+
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~-~d~----~~~~~adiVV   93 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD-KDY----SVTANSKIVV   93 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC-SSG----GGGTTCSEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec-cch----hhcccccEEE
Confidence            568999996 99999999999999322389999988654321    11     111122111 122    3478999999


Q ss_pred             EcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          153 ILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       153 ~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      ..||.....+.        +-       .+....|....+.+++.+++.+-+-++.+
T Consensus        94 itAg~~~~~g~--------tR-------~~l~~~N~~i~~~i~~~i~~~~p~aiiiv  135 (160)
T d1i0za1          94 VTAGVRQQEGE--------SR-------LNLVQRNVNVFKFIIPQIVKYSPDCIIIV  135 (160)
T ss_dssp             ECCSCCCCTTC--------CG-------GGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EecCCccccCc--------ch-------HHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            99997433211        11       12236688888889999998876655443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.38  E-value=0.00015  Score=56.40  Aligned_cols=72  Identities=14%  Similarity=0.137  Sum_probs=52.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCC-CcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIR-DSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~-d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +.+|+|.|+ |.+|...++.+...  |++|+++++++++.+...+ ....+. |.. +.+..++..+++|+++.+.+.
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~--G~~vi~~~~~~~k~~~a~~lGa~~~i-~~~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAM--GAETYVISRSSRKREDAMKMGADHYI-ATLEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEEE-EGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCEEEEECC-CCcchhHHHHhhhc--cccccccccchhHHHHhhccCCcEEe-eccchHHHHHhhhcccceEEEEecC
Confidence            568999987 99999999988888  9999999999887765432 233222 333 334444555679999999874

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.38  E-value=0.00017  Score=56.83  Aligned_cols=33  Identities=18%  Similarity=0.309  Sum_probs=28.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLV  115 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~  115 (331)
                      |++|.|.||||++|+.|++.|..++ ..++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP-~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHP-HMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCT-TEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCC-CCceEeeE
Confidence            5789999999999999999888873 77877654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.38  E-value=0.0018  Score=49.05  Aligned_cols=111  Identities=8%  Similarity=0.007  Sum_probs=70.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-----------CCCCcEEEccCCCcccHHHHhcCCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-----------GGADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-----------~~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      +.||.|+|+ |.+|+.++..|+.++ =.++.++++++++.+..           .....+...|  +    .+.++++|+
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~-l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~adv   74 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKN-LGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADV   74 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcE
Confidence            468999996 999999998777663 24788999887654321           1123333322  1    245689999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      |+..+|.....+..  ...+        +..+....|....+.+++.+++.+-+-++.+-
T Consensus        75 vvitag~~~~~g~~--~~~~--------~R~~l~~~N~~iv~~i~~~i~~~~p~aivivv  124 (150)
T d1t2da1          75 VIVTAGFTKAPGKS--DKEW--------NRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  124 (150)
T ss_dssp             EEECCSCSSCTTCC--STTC--------CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             EEEecccccCCCCC--cccc--------chhHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            99999964442210  0000        01122366888888999999988766655543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.36  E-value=0.00025  Score=55.48  Aligned_cols=106  Identities=11%  Similarity=0.010  Sum_probs=62.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCC-C--C--eEEEEecCCch--hhh----cCCCCcEEEccCCCcccHHHHhcCCCE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSE-Q--Y--AARGLVRTEES--KQK----IGGADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~-g--~--~V~~l~R~~~~--~~~----l~~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      ..+|.|+||+|.||++++-.|+...- |  .  .++.++.....  ++.    +..-.........-..+..++++++|+
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDv  103 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW  103 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCce
Confidence            34799999999999999999987410 2  1  44455554422  121    111100000011112345678899999


Q ss_pred             EEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcC
Q 046297          151 LIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG  202 (331)
Q Consensus       151 Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~  202 (331)
                      ||..+|.....+.        ...       +....|....+.+.+++.++.
T Consensus       104 Vvi~ag~~rkpg~--------tR~-------Dll~~N~~I~k~~~~~i~~~a  140 (175)
T d7mdha1         104 ALLIGAKPRGPGM--------ERA-------ALLDINGQIFADQGKALNAVA  140 (175)
T ss_dssp             EEECCCCCCCTTC--------CHH-------HHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEeeccCCCCCC--------cHH-------HHHHHHHHHHHHHHHHHHhhC
Confidence            9999997443221        111       123567777888889988864

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.35  E-value=0.00039  Score=51.43  Aligned_cols=69  Identities=19%  Similarity=0.284  Sum_probs=54.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc-CCCCcEEEccCCCcccHHHH-hcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI-GGADDLFIGDIRDSNSIIPA-IQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l-~~~~~~v~~Dl~d~~~~~~~-l~~~d~Vi~~ag  156 (331)
                      +.|+|.|. |-+|+.+++.|  +  ++.|+++..+++..+.+ ..++.++.+|.++++.+.++ +++++.++-+..
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~--~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--R--GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--C--GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--c--CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence            45888885 99999999998  3  55678888888776654 34689999999999988775 468999997764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.00012  Score=56.95  Aligned_cols=72  Identities=15%  Similarity=0.224  Sum_probs=55.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      +.+|+|.|+ |.+|...++.+...  |++++++++++++.+...+ .... ..|..+++......+++|+++.+.|.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~--Ga~~i~~~~~~~~~~~a~~lGad~-~i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADE-VVNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSE-EEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCEEEEecc-chHHHHHHHHhhcc--cccchhhccchhHHHHHhccCCcE-EEECchhhHHHHhcCCCceeeeeeec
Confidence            568999986 89999999988888  9999999998877654322 2222 24666666666666789999999984

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=8e-05  Score=59.23  Aligned_cols=71  Identities=18%  Similarity=0.158  Sum_probs=47.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCchhhhcCC--CCcEEEccCCCcccHHHHh----cCCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEESKQKIGG--ADDLFIGDIRDSNSIIPAI----QGIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~~~~~l~~--~~~~v~~Dl~d~~~~~~~l----~~~d~Vi~~a  155 (331)
                      .+|||+||+|.+|...++.....  |.+ |++.++++++...+..  ..+ ...|..+++..+.+-    +++|+|+.+.
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~--Ga~~vi~~~~~~e~~~~l~~~~gad-~vi~~~~~~~~~~~~~~~~~GvDvv~D~v  108 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLL--GCSRVVGICGTQEKCLFLTSELGFD-AAVNYKTGNVAEQLREACPGGVDVYFDNV  108 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHT--TCSEEEEEESSHHHHHHHHHHSCCS-EEEETTSSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CEEEEECCCchhhHHHHHHHHHc--CCcceecccchHHHHhhhhhcccce-EEeeccchhHHHHHHHHhccCceEEEecC
Confidence            57999999999999999998888  876 4455666555444321  222 234555544322222    2699999999


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      |
T Consensus       109 G  109 (187)
T d1vj1a2         109 G  109 (187)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.28  E-value=0.00025  Score=55.87  Aligned_cols=71  Identities=15%  Similarity=0.123  Sum_probs=50.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch--hhhcCCC-------CcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES--KQKIGGA-------DDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~--~~~l~~~-------~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      |+|.|.|+ |..|..++..|.++  |++|++..|..++  .+.+...       ...-..++.-.+++.++++++|+|+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~--g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~   77 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLL   77 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhc
Confidence            68999996 99999999999999  9999999985432  2222111       11111223335678899999999998


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      +..
T Consensus        78 avp   80 (180)
T d1txga2          78 GVS   80 (180)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00054  Score=53.28  Aligned_cols=73  Identities=18%  Similarity=0.080  Sum_probs=52.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CC-cEEEccCCCcccHHHHhc-----CCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-AD-DLFIGDIRDSNSIIPAIQ-----GIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~-~~v~~Dl~d~~~~~~~l~-----~~d~Vi~  153 (331)
                      +.+|+|.|+ |.+|...+..+...  |+ +|++.++++++.+..++ +. .++..+-.+.....+.+.     ++|+||.
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~--G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid  103 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE  103 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred             CCEEEEECC-CccHHHHHHHHHHc--CCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEe
Confidence            457999986 99999999999988  88 79999999887665432 22 333333334444444442     6899999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      +.|.
T Consensus       104 ~~G~  107 (171)
T d1pl8a2         104 CTGA  107 (171)
T ss_dssp             CSCC
T ss_pred             ccCC
Confidence            9983

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.25  E-value=2.3e-05  Score=61.57  Aligned_cols=69  Identities=23%  Similarity=0.185  Sum_probs=49.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC----CCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG----ADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~----~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .+++|+|.|+ |+.++.++..|.+.  +.+|+++.|+.++.+.+..    ...+...+..+.     .+..+|+|||+..
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~--~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-----~~~~~diiIN~tp   88 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-----PLQTYDLVINATS   88 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-----CCSCCSEEEECCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHccc--CceeeeccchHHHHHHHHHHHhhccccchhhhccc-----cccccceeeeccc
Confidence            4678999996 88899999999987  8899999999877665422    122222222111     2467899999976


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus        89 ~   89 (171)
T d1p77a1          89 A   89 (171)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.24  E-value=0.00031  Score=53.78  Aligned_cols=103  Identities=18%  Similarity=-0.025  Sum_probs=61.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCC-C----CeEEEEecCCch--hhhc----C--CCCcEEEccCCCcccHHHHhcCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSE-Q----YAARGLVRTEES--KQKI----G--GADDLFIGDIRDSNSIIPAIQGI  148 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~-g----~~V~~l~R~~~~--~~~l----~--~~~~~v~~Dl~d~~~~~~~l~~~  148 (331)
                      .+||.|+||+|.+|++++-.|+.... +    ..++.++.++..  .+.+    .  ..........  ..+..+.++++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   80 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TDKEEIAFKDL   80 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ESCHHHHTTTC
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--CcccccccCCc
Confidence            56899999999999999999986510 1    134445443322  1111    0  0011111111  22345788999


Q ss_pred             CEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHc
Q 046297          149 DALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAA  201 (331)
Q Consensus       149 d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~  201 (331)
                      |+||..+|.....+.               ...+..+.|..-.+.+.+.+.++
T Consensus        81 dvVVitag~~~~~g~---------------sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          81 DVAILVGSMPRRDGM---------------ERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             SEEEECCSCCCCTTC---------------CTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecccCCCCCC---------------chhHHHHHhHHHHHHHHHHHHhh
Confidence            999999997443221               11222366888888888888775

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.22  E-value=0.0012  Score=51.48  Aligned_cols=71  Identities=10%  Similarity=0.216  Sum_probs=53.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-C--cEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-D--DLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~--~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      ..+|-|+|- |.+|..+++.|+++  ||+|++.+|++++.+++..+ .  .... -....+++.+.+..+|.++-+..
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~-~a~~~~~~~~~~~~~~~ii~~~~   75 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVL-GAHSLEEMVSKLKKPRRIILLVK   75 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCE-ECSSHHHHHHHBCSSCEEEECSC
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHhcccccccc-chhhhhhhhhhhcccceEEEecC
Confidence            356899995 99999999999999  99999999999887765321 1  1111 13345677788889999988864

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.22  E-value=9.9e-05  Score=57.90  Aligned_cols=71  Identities=15%  Similarity=0.049  Sum_probs=44.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh---hhcCCC-CcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK---QKIGGA-DDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~---~~l~~~-~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |++|.|.||||++|+.+++.|.+. |..++..+..+...-   ....+. ..  ..++. ..+..+..+++|+|+.+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~H-P~~ei~~l~s~~~aG~~i~~~~p~~~~--~~~~~-~~~~~~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYAGKKLEEIFPSTLE--NSILS-EFDPEKVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTTTSBHHHHCGGGCC--CCBCB-CCCHHHHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhC-CCceEEEeeccccCCCcccccCchhhc--ccccc-ccCHhHhccccceEEEccc
Confidence            568999999999999999988876 377888776543221   111111 11  01111 1223344568999998876

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.20  E-value=0.0017  Score=49.55  Aligned_cols=68  Identities=25%  Similarity=0.330  Sum_probs=38.7

Q ss_pred             eEEEECCCChhHHHHHHHHHhcC-CCCeEEEEecCCchhhhcCCCCcEE-EccCCCcccHHHHhcCCCEEEEccc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERS-EQYAARGLVRTEESKQKIGGADDLF-IGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~-~g~~V~~l~R~~~~~~~l~~~~~~v-~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      +|.|+||||++|..+++.|.+++ |..++..+..+...-..+....... ..+..+     ..+.++|.++.+++
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~-----~~~~~~d~~f~~~~   72 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE-----TAFEGVDIALFSAG   72 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCT-----TTTTTCSEEEECSC
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccch-----hhhhhhhhhhhccC
Confidence            69999999999999999887772 2334544443322222221111111 112211     23457888888875

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.19  E-value=9.8e-05  Score=57.58  Aligned_cols=73  Identities=22%  Similarity=0.238  Sum_probs=49.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCC--cccHHHHh-cCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRD--SNSIIPAI-QGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d--~~~~~~~l-~~~d~Vi~~ag~  157 (331)
                      +..|||+||+|.+|...++.....  |++|++.++++++.+.+.. ..+.+ .|..+  .+.+...- +++|+|+++.|.
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~~~~lGad~v-i~~~~~~~~~~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQLGASEV-ISREDVYDGTLKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHHHTCSEE-EEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHc--CCceEEEecCHHHHHHHHhhcccce-EeccchhchhhhcccCCCceEEEecCcH
Confidence            346999999999999999999999  9999999999887766533 22222 12211  11111111 368999999873

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.00021  Score=55.23  Aligned_cols=98  Identities=21%  Similarity=0.258  Sum_probs=60.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhh-h-cCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQ-K-IGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~-~-l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      .+||.|.|++|.+|+.|++.+.+.. +.++++ ++|.....- . +..-......++.-.+++...++.+|+||...-  
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~-~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~--   80 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR--   80 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEecc--
Confidence            5689999999999999999999864 777765 444332211 0 000000001111112234456678999998864  


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                   -.++...+++|.++++ .+| ++|+|
T Consensus        81 -----------------------------p~~~~~~~~~a~~~~~-~~V-iGTTG  104 (162)
T d1diha1          81 -----------------------------PEGTLNHLAFCRQHGK-GMV-IGTTG  104 (162)
T ss_dssp             -----------------------------HHHHHHHHHHHHHTTC-EEE-ECCCC
T ss_pred             -----------------------------HHHHHHHHHHHHhccc-eeE-EecCC
Confidence                                         3456788999999987 444 35555

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.17  E-value=5.9e-05  Score=60.13  Aligned_cols=72  Identities=14%  Similarity=0.179  Sum_probs=53.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC---------CCCcEEEccCCCcccHHHHhcCCCEE
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG---------GADDLFIGDIRDSNSIIPAIQGIDAL  151 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~---------~~~~~v~~Dl~d~~~~~~~l~~~d~V  151 (331)
                      .++||.|.|| |..|.+++..|.+.  ||+|++.+|+++..+.+.         +++. ..-++.-..++.++++++|+|
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~--g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAYNGAEII   81 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHTTCSCE
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHc--CCeEEEEEecHHHHHHHhhcccccccccccc-cccccccchhhhhccCCCCEE
Confidence            3567999996 99999999999999  999999999887655431         1111 112232345688899999999


Q ss_pred             EEccc
Q 046297          152 IILTS  156 (331)
Q Consensus       152 i~~ag  156 (331)
                      +.+..
T Consensus        82 iiavP   86 (189)
T d1n1ea2          82 LFVIP   86 (189)
T ss_dssp             EECSC
T ss_pred             EEcCc
Confidence            88763

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.15  E-value=0.00025  Score=55.20  Aligned_cols=73  Identities=25%  Similarity=0.333  Sum_probs=52.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-----CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-----GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~  154 (331)
                      ..+|+|+|++|.+|...++.+...  | .+|+++++++++.+.+.. +... ..|..+++..++..+     ++|+++.+
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~--g~~~V~~~~~~~~~~~~~~~~Ga~~-~i~~~~~~~~~~~~~~~~~~~~d~vid~  104 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAV--SGATIIGVDVREEAVEAAKRAGADY-VINASMQDPLAEIRRITESKGVDAVIDL  104 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHH--TCCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCEEEEEeccccceeeeeeccccc--ccccccccccchhhHHHHHHcCCce-eeccCCcCHHHHHHHHhhcccchhhhcc
Confidence            467999999999999999999988  7 588899998877665432 2222 234444444444432     58999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      +|.
T Consensus       105 ~g~  107 (170)
T d1jvba2         105 NNS  107 (170)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            984

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.13  E-value=0.00078  Score=49.71  Aligned_cols=73  Identities=22%  Similarity=0.236  Sum_probs=52.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEe-cCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLV-RTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPKM  161 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~-R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~~  161 (331)
                      |||.|.|++|..|+.|++.+.++  ++++++-. ++.                   .    +.++++|+||....+    
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~--~~~l~~~id~~~-------------------~----~~~~~~DVvIDFS~p----   51 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEK--GHELVLKVDVNG-------------------V----EELDSPDVVIDFSSP----   51 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEETTE-------------------E----EECSCCSEEEECSCG----
T ss_pred             CEEEEECCCCHHHHHHHHHHhcC--CCeEEEEECCCc-------------------H----HHhccCCEEEEecCH----
Confidence            57999999999999999988888  99877542 221                   1    123568899988653    


Q ss_pred             CCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          162 KPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       162 ~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                 .++...++.|.++++ .+| ++|+|
T Consensus        52 ---------------------------~~~~~~l~~~~~~~~-p~V-iGTTG   74 (128)
T d1vm6a3          52 ---------------------------EALPKTVDLCKKYRA-GLV-LGTTA   74 (128)
T ss_dssp             ---------------------------GGHHHHHHHHHHHTC-EEE-ECCCS
T ss_pred             ---------------------------HHHHHHHHHHHhcCC-CEE-EEcCC
Confidence                                       226788888988886 444 35554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.10  E-value=0.00027  Score=55.95  Aligned_cols=38  Identities=16%  Similarity=0.018  Sum_probs=34.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ  122 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~  122 (331)
                      -++|.|.|| |.+|+.++..++..  |++|++++++++.++
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~~~l~   41 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASK--GTPILMKDINEHGIE   41 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHT--TCCEEEECSSHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhC--CCeEEEEECCHHHHh
Confidence            467999997 99999999999999  999999999986544

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.09  E-value=0.00012  Score=57.91  Aligned_cols=75  Identities=13%  Similarity=0.080  Sum_probs=45.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch---hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES---KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~---~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .++.||.|.||||++|+.+++.|.+. |..++..+..+...   .....+.. ....+..........+.++|+|+.+..
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dvvf~alp   80 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKAGEQFGSVFPHL-ITQDLPNLVAVKDADFSNVDAVFCCLP   80 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTTTSCHHHHCGGG-TTSCCCCCBCGGGCCGGGCSEEEECCS
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccCCCccccccccc-cccccccchhhhhhhhcccceeeeccc
Confidence            34678999999999999999999987 47787776543221   11111100 000111112222334568999998875

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.07  E-value=0.00016  Score=55.29  Aligned_cols=65  Identities=17%  Similarity=0.111  Sum_probs=49.5

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      |||.|.| .|.+|+++++.|++.  |+++++..|++++.+++.....     +.-..+..++++++|+|+-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~--~~~i~v~~r~~~~~~~l~~~~g-----~~~~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLA-----LPYAMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHT-----CCBCSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhC--CCeEEEEcChHHhHHhhccccc-----eeeechhhhhhhccceeeeec
Confidence            5789998 599999999999999  9999999999887666532111     111234667788999999776

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.05  E-value=0.0017  Score=50.18  Aligned_cols=69  Identities=20%  Similarity=0.087  Sum_probs=45.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC--CcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA--DDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~--~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |++|+|+|. |.+|..+++.|.+.+..++|++.+|+++..+.....  ......+.   +  ......+|.|+.+.-
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~---~--~~~~~~~dlIila~p   71 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---A--KVEDFSPDFVMLSSP   71 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCG---G--GGGGTCCSEEEECSC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhh---h--hhhccccccccccCC
Confidence            467999985 999999999999993235899999998776654321  22222221   1  112247899987763

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.03  E-value=0.00038  Score=53.10  Aligned_cols=64  Identities=17%  Similarity=0.166  Sum_probs=46.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCc-EEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADD-LFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~-~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      |+|.+.|+ |.+|+++++.|++.+ +++|++.+|++++.+.+..+.. ....|   .+    .++++|+||-+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~-~~~i~v~~r~~~~~~~l~~~~~~~~~~~---~~----~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQG-GYRIYIANRGAEKRERLEKELGVETSAT---LP----ELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHC-SCEEEEECSSHHHHHHHHHHTCCEEESS---CC----CCCTTSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCC-CCcEEEEeCChhHHHHhhhhcccccccc---cc----cccccceEEEec
Confidence            67999986 999999999999982 3999999999988777644221 12222   22    246789999765

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.92  E-value=0.0027  Score=46.72  Aligned_cols=89  Identities=24%  Similarity=0.228  Sum_probs=61.1

Q ss_pred             CCeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      .+.|.|+||+   +..|..+.+.|.+.+ .++|+.+..+.+.....+     ..-++.|      +=..+|.++-+..  
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~~i~G~~-----~y~sl~d------lp~~vDlvvi~vp--   73 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEEVQGVK-----AYKSVKD------IPDEIDLAIIVVP--   73 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSEETTEE-----CBSSTTS------CSSCCSEEEECSC--
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCccccCCeE-----eecchhh------cCCCCceEEEecC--
Confidence            4679999999   899999999988762 378988876543322111     1123322      2246898887764  


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                   -..+..+++.|.+.|++.++.+|+..
T Consensus        74 -----------------------------~~~~~~~~~~~~~~g~~~~vi~s~Gf   99 (129)
T d2csua1          74 -----------------------------KRFVKDTLIQCGEKGVKGVVIITAGF   99 (129)
T ss_dssp             -----------------------------HHHHHHHHHHHHHHTCCEEEECCCSS
T ss_pred             -----------------------------hHHhHHHHHHHHHcCCCEEEEecccc
Confidence                                         23367788999999999888877654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.91  E-value=0.00032  Score=54.87  Aligned_cols=72  Identities=18%  Similarity=0.141  Sum_probs=49.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcccHH---HHhc--CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSNSII---PAIQ--GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~---~~l~--~~d~Vi~~  154 (331)
                      +.+|+|.|+ |.+|...++.+...  |+ +|+++++++++.+...+ +... ..|..+++..+   +...  ++|+||.+
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~--Ga~~Vi~~d~~~~r~~~a~~lGa~~-~i~~~~~~~~~~v~~~t~g~G~D~vid~  103 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLR--GAGRIIGVGSRPICVEAAKFYGATD-ILNYKNGHIEDQVMKLTNGKGVDRVIMA  103 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTT--TCSCEEEECCCHHHHHHHHHHTCSE-EECGGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCEEEEEcC-Ccchhhhhhhhhcc--cccccccccchhhhHHHHHhhCccc-cccccchhHHHHHHHHhhccCcceEEEc
Confidence            567999986 99999999999888  86 79999998877654332 1222 23444433333   3322  59999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      +|.
T Consensus       104 ~g~  106 (174)
T d1jqba2         104 GGG  106 (174)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            984

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.85  E-value=0.00093  Score=52.42  Aligned_cols=72  Identities=17%  Similarity=0.159  Sum_probs=50.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcc--cHHH-Hh-----cCCCEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSN--SIIP-AI-----QGIDAL  151 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~--~~~~-~l-----~~~d~V  151 (331)
                      +.+|||+|+ |.+|...++.+...  |+ +|+++++++++.+...+ .... ..|..+.+  +..+ +.     .++|+|
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~i~~~~~~~g~Dvv  104 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAEEIGADL-TLNRRETSVEERRKAIMDITHGRGADFI  104 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEECC-Cccchhheeccccc--ccccccccccccccccccccccceE-EEeccccchHHHHHHHHHhhCCCCceEE
Confidence            568999997 99999999999998  87 79999999887665432 1222 23444332  2222 22     258999


Q ss_pred             EEcccC
Q 046297          152 IILTSA  157 (331)
Q Consensus       152 i~~ag~  157 (331)
                      |.+.|.
T Consensus       105 id~vG~  110 (182)
T d1vj0a2         105 LEATGD  110 (182)
T ss_dssp             EECSSC
T ss_pred             eecCCc
Confidence            999984

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.0016  Score=52.90  Aligned_cols=178  Identities=9%  Similarity=0.024  Sum_probs=89.1

Q ss_pred             CCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHH----HHhcCCCEEEEcccCCCCCCCC
Q 046297           89 GAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSII----PAIQGIDALIILTSAVPKMKPD  164 (331)
Q Consensus        89 GatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~----~~l~~~d~Vi~~ag~~~~~~~~  164 (331)
                      -.||..|.+|++++..+  |++|+++.-....  ..+..+..+.  +...+++.    +.+..+|++|++|+........
T Consensus        29 ~SSGk~G~aiA~~~~~~--Ga~V~li~g~~~~--~~p~~~~~~~--~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf~~~~  102 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARR--GANVTLVSGPVSL--PTPPFVKRVD--VMTALEMEAAVNASVQQQNIFIGCAAVADYRAAT  102 (223)
T ss_dssp             CCCSHHHHHHHHHHHHT--TCEEEEEECSCCC--CCCTTEEEEE--CCSHHHHHHHHHHHGGGCSEEEECCBCCSEEESS
T ss_pred             CCcHHHHHHHHHHHHHc--CCchhhhhccccc--Ccccccccce--ehhhHHHHHHHHhhhccceeEeeeechhhhhhhh
Confidence            34799999999999999  9999998875432  1222344443  33344443    4446899999999975442111


Q ss_pred             CCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHhcC
Q 046297          165 FDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSG  244 (331)
Q Consensus       165 ~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~  244 (331)
                      ..+.......    .......+++.-+.-++....+..-++.+.++-..- . +.           .-+ .+.+-+.+.+
T Consensus       103 ~~~~k~Kk~~----~~~~~l~L~L~~tpdIL~~l~~~k~~~~~~VGFaaE-t-~~-----------l~~-~A~~Kl~~K~  164 (223)
T d1u7za_         103 VAPEKIKKQA----TQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAE-T-NN-----------VEE-YARQKRIRKN  164 (223)
T ss_dssp             CCSSCC-----------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEEE-S-SS-----------HHH-HHHHHHHHHT
T ss_pred             hhhhhccccc----ccccccceeeecCHHHHHHHHhhccCCceEEEEeec-c-cc-----------hhh-HHHHHHHhcC
Confidence            1110000000    000001122222344566555443332233443321 1 11           112 2333466778


Q ss_pred             CCEEEEecC----cccCCCcchhhhhccCCccccCCcccccCHHHHHHHHHHHh
Q 046297          245 IPYTIIRAG----GLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQAL  294 (331)
Q Consensus       245 ~~~~ilrp~----~v~g~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  294 (331)
                      +++++...-    ..+|...+...++......    .++..+=.++|+.++..+
T Consensus       165 ~D~IvAN~v~~~~~~fgsd~n~v~ii~~~~~~----~~~~~sK~~iA~~Il~~I  214 (223)
T d1u7za_         165 LDLICANDVSQPTQGFNSDNNALHLFWQDGDK----VLPLERKELLGQLLLDEI  214 (223)
T ss_dssp             CSEEEEEECSSTTSSTTSSEEEEEEEETTEEE----EEEEEEHHHHHHHHHHHH
T ss_pred             CCEEEeecccCCCCCcCCCceEEEEEECCCeE----EcCCCCHHHHHHHHHHHH
Confidence            999988752    2455554433333222111    122345688888887654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.74  E-value=0.0013  Score=50.01  Aligned_cols=64  Identities=11%  Similarity=0.065  Sum_probs=47.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcC-CCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      |||.|+| .|.+|+.+++.|+++  ||+|++.+|++++...+. ....+       .++..++++++|+|+-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTVGV-------TETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHHTC-------EECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHC--CCeEEEEcCchhHHHHHhhhcccc-------cccHHHHHhhcCeEEEEec
Confidence            5799997 599999999999999  999999988776544322 11221       1234567889999998874

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.73  E-value=0.00096  Score=51.26  Aligned_cols=73  Identities=18%  Similarity=0.104  Sum_probs=59.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC----CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG----ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~----~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+|+|.|| |-.|..-++.....  |.+|++++++.+++++++.    .++..   ..+.+.+.+.++++|+||..+-.
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~l--GA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~aali  105 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLV  105 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhC--CCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEeeec
Confidence            467999997 99999999999999  9999999999888776532    23333   45577899999999999999876


Q ss_pred             CCC
Q 046297          158 VPK  160 (331)
Q Consensus       158 ~~~  160 (331)
                      ...
T Consensus       106 pG~  108 (168)
T d1pjca1         106 PGR  108 (168)
T ss_dssp             TTS
T ss_pred             CCc
Confidence            444

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.62  E-value=0.0044  Score=48.12  Aligned_cols=39  Identities=21%  Similarity=0.227  Sum_probs=34.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI  124 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l  124 (331)
                      |||-|+| .|.+|..+++.|+++  ||+|++.+|++++.+++
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~--G~~V~~~dr~~~~~~~l   40 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEK--GFKVAVFNRTYSKSEEF   40 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHC--CCeEEEEECCHHHHHHH
Confidence            6799998 699999999999999  99999999998876654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.61  E-value=0.0016  Score=50.09  Aligned_cols=71  Identities=11%  Similarity=0.186  Sum_probs=48.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHH---hcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPA---IQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~---l~~~d~Vi~~ag  156 (331)
                      ..+|+|.|+ |.+|...++.+...  |++|+++++++++.+...+ ..+.+ .|..+.+..+++   ..+.+.++.+++
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~--G~~Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAM--GLHVAAIDIDDAKLELARKLGASLT-VNARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             CCEEEEeec-cccHHHHHHHHHHc--CCccceecchhhHHHhhhccCcccc-ccccchhHHHHHHHhhcCCcccccccc
Confidence            568999986 99999999888888  9999999999877665432 22222 355554443333   345666666665

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.60  E-value=0.0031  Score=48.94  Aligned_cols=73  Identities=18%  Similarity=0.117  Sum_probs=49.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHh-----cCCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAI-----QGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l-----~~~d~Vi~~  154 (331)
                      +.+|+|.|+ |.+|...+..+...  | .+|++.++++++.+.... ....+..+-..++.+.+..     .++|++|.+
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~--g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~  105 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV  105 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHc--CCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence            467999999 67999999999988  5 589999999887665433 2333222222223333333     279999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      .|.
T Consensus       106 ~G~  108 (176)
T d2jhfa2         106 IGR  108 (176)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            984

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.59  E-value=0.012  Score=43.47  Aligned_cols=71  Identities=18%  Similarity=0.308  Sum_probs=48.0

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhhhcC-CCCcEEEccCCCcccHHHHhc-----CCCEEEEccc
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQKIG-GADDLFIGDIRDSNSIIPAIQ-----GIDALIILTS  156 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~l~-~~~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~~ag  156 (331)
                      ||.|.|++|..|+.+++.+.+.. ++++.+ +++.. ....+. .+.+ +..|++.++.+.+.++     ++-.|+=..|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~-~~~l~~~~d~~~-~~~~~~~~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAAD-DLTLSAELDAGD-PLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHST-TSEEEEEECTTC-CTHHHHTTTCS-EEEECCCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCC-chhhhccccCC-EEEEcccHHHHHHHHHHHHhcCCCEEEeccc
Confidence            68999999999999999888763 788775 44432 222222 2233 4568888877766664     5677775555


Q ss_pred             C
Q 046297          157 A  157 (331)
Q Consensus       157 ~  157 (331)
                      .
T Consensus        78 ~   78 (135)
T d1yl7a1          78 F   78 (135)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.55  E-value=0.0033  Score=49.21  Aligned_cols=63  Identities=27%  Similarity=0.262  Sum_probs=49.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+++|.|.|. |.||+.+++.|..-  |.+|++.+|.+...            +..-.+++.++++.+|+|+.+...
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~--g~~v~~~d~~~~~~------------~~~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAAL--GAQVRGFSRTPKEG------------PWRFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHT--TCEEEEECSSCCCS------------SSCCBSCSHHHHTTCSEEEECCCC
T ss_pred             ccCceEEEecc-ccccccceeeeecc--cccccccccccccc------------ceeeeechhhhhhccchhhccccc
Confidence            45789999995 99999999999998  99999999875431            111234578899999999987754

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.53  E-value=0.0014  Score=51.68  Aligned_cols=72  Identities=11%  Similarity=0.145  Sum_probs=46.7

Q ss_pred             CeEEE-ECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CC-C-CcEEEccCCCccc----HHHHh----cC
Q 046297           83 STVLV-TGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GG-A-DDLFIGDIRDSNS----IIPAI----QG  147 (331)
Q Consensus        83 ~~VlV-tGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~-~-~~~v~~Dl~d~~~----~~~~l----~~  147 (331)
                      .+|+| .||+|.+|...++.....  |.+|++++|+.++.++.    .. . -.++..|-.+...    +.+..    .+
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~--Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhc--CCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCC
Confidence            45666 589999999999999999  99999999886554321    11 1 2333322111111    22222    26


Q ss_pred             CCEEEEccc
Q 046297          148 IDALIILTS  156 (331)
Q Consensus       148 ~d~Vi~~ag  156 (331)
                      +|+|+++.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            899999987

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.015  Score=41.59  Aligned_cols=75  Identities=12%  Similarity=0.115  Sum_probs=56.1

Q ss_pred             CCCeEEEECCCC----------hhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CC
Q 046297           81 AKSTVLVTGAGG----------RTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GI  148 (331)
Q Consensus        81 ~~~~VlVtGatG----------~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~  148 (331)
                      ..++|||.|+..          +.+.+.++.|.+.  |++++.+.-+++...--..-..-+..+.-..+.+.++++  +.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~IliN~NPeTVstd~d~aD~lYfeplt~e~v~~Ii~~E~p   80 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKP   80 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEECCCTTSSTTSTTSSSEEECCCCSHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhc--CCeEEEEecChhhhhcChhhcCceEEccCCHHHHHHHHHHhCC
Confidence            467899999744          7889999999999  999999999987755333334445555556677777764  78


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |.|+-..|.
T Consensus        81 ~~ii~~~GG   89 (121)
T d1a9xa4          81 KGVIVQYGG   89 (121)
T ss_dssp             SEEECSSST
T ss_pred             CEEEeehhh
Confidence            998877663

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.42  E-value=0.0021  Score=49.99  Aligned_cols=71  Identities=13%  Similarity=0.124  Sum_probs=47.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeE-EEEecCCchhhhcCC-C-CcEEEccCCCcccHHHHh---c-CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAA-RGLVRTEESKQKIGG-A-DDLFIGDIRDSNSIIPAI---Q-GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V-~~l~R~~~~~~~l~~-~-~~~v~~Dl~d~~~~~~~l---~-~~d~Vi~~  154 (331)
                      ..+|+|.|+ |.+|...++.+...  |+++ ++.++++++.+...+ . .+++  |..+++..+++.   . ++|+||.+
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~--g~~~v~~~~~~~~k~~~a~~~Ga~~~i--~~~~~~~~~~i~~~t~gg~D~vid~  103 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQLGATHVI--NSKTQDPVAAIKEITDGGVNFALES  103 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred             CCEEEEeCC-CHHHhhhhhccccc--ccceeeeeccHHHHHHHHHHcCCeEEE--eCCCcCHHHHHHHHcCCCCcEEEEc
Confidence            567999997 99999999999888  7755 456666666554322 1 2333  555544333222   1 58999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      .|.
T Consensus       104 ~G~  106 (174)
T d1f8fa2         104 TGS  106 (174)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            984

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.42  E-value=0.01  Score=42.98  Aligned_cols=75  Identities=17%  Similarity=0.156  Sum_probs=57.2

Q ss_pred             CCCeEEEECCCC----------hhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CC
Q 046297           81 AKSTVLVTGAGG----------RTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GI  148 (331)
Q Consensus        81 ~~~~VlVtGatG----------~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~  148 (331)
                      ..++|||.|+..          +.+.+.++.|.+.  ||+++.+.-+++....-..-..-+..+.-..+.+.++++  ++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~~E~p   83 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERP   83 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHHHhCc
Confidence            357899999744          7889999999999  999999999987754332334455555666777888875  79


Q ss_pred             CEEEEcccC
Q 046297          149 DALIILTSA  157 (331)
Q Consensus       149 d~Vi~~ag~  157 (331)
                      |.|+-..|.
T Consensus        84 d~il~~~GG   92 (127)
T d1a9xa3          84 DAVLPTMGG   92 (127)
T ss_dssp             SEEECSSSH
T ss_pred             CCeEEEeee
Confidence            999877763

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.39  E-value=0.0046  Score=47.79  Aligned_cols=72  Identities=17%  Similarity=0.071  Sum_probs=47.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCC-CcccHHHHh-----cCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIR-DSNSIIPAI-----QGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~-d~~~~~~~l-----~~~d~Vi~  153 (331)
                      ..+|+|.|+ |.+|...++.+...  |. +|++.++++++.+...+ ....+ .|.. +.+.+.+.+     .++|+||.
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~--G~~~vi~~~~~~~k~~~ak~lGa~~~-i~~~~~~~~~~~~~~~~~~~g~D~vid  104 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEVLIEMTDGGVDYSFE  104 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHH--hcCceEEEcccHHHHHHHHHhCCcEE-EeCCchhhHHHHHHHHHcCCCCcEeee
Confidence            457999998 67999999999998  85 56677777766544322 22222 2332 233344443     37999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      +.|.
T Consensus       105 ~~G~  108 (176)
T d2fzwa2         105 CIGN  108 (176)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9984

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.30  E-value=0.0029  Score=49.19  Aligned_cols=72  Identities=19%  Similarity=0.122  Sum_probs=49.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcc-cHHHHh-----cCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSN-SIIPAI-----QGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~-~~~~~l-----~~~d~Vi~  153 (331)
                      ..+|+|.|+ |.+|...++.+...  |. +|+++++++++++...+ ..+.+ .|..+.+ .+.+..     .++|++|.
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~--G~~~Vi~~d~~~~kl~~a~~lGa~~~-i~~~~~d~~~~~~~~~~~~~G~d~vid  103 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVICEKTNGGVDYAVE  103 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHc--CCceeeccCChHHHHHHHHHcCCcEE-EcCCCchhHHHHHHHHhcCCCCcEEEE
Confidence            567999986 99999999999999  75 78899999887765433 22222 2433322 223232     27999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      +.|.
T Consensus       104 ~~g~  107 (174)
T d1p0fa2         104 CAGR  107 (174)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9984

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.27  E-value=0.003  Score=49.98  Aligned_cols=40  Identities=20%  Similarity=0.123  Sum_probs=33.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG  126 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~  126 (331)
                      |+|.|.| .|++|..++. ++++  ||+|++++-++++.+.+..
T Consensus         1 MkI~ViG-lG~vGl~~a~-~~a~--g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGV-LLSL--QNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHH-HHTT--TSEEEEECSCHHHHHHHHT
T ss_pred             CEEEEEC-CChhHHHHHH-HHHC--CCcEEEEECCHHHHHHHhh
Confidence            6899997 7999999986 5567  9999999999888776644

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.24  E-value=0.014  Score=43.29  Aligned_cols=86  Identities=19%  Similarity=0.129  Sum_probs=59.0

Q ss_pred             CCeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      .++|.|+|++   +..|..+++.|++.  ||+|+.+..+......       +.+    ..++.++-..+|.++-+..  
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pVnP~~~~i~G-------~~~----~~sl~dlp~~iD~v~i~vp--   83 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPKYEEVLG-------RKC----YPSVLDIPDKIEVVDLFVK--   83 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEETT-------EEC----BSSGGGCSSCCSEEEECSC--
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEECCcccccCC-------Ccc----cccccccCccceEEEEEeC--
Confidence            4679999998   78999999999999  9998887654332211       111    1223333346788877763  


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                                                   -..+..+++.|.+.|++.+++..+
T Consensus        84 -----------------------------~~~~~~~~~e~~~~g~k~v~~~~G  107 (139)
T d2d59a1          84 -----------------------------PKLTMEYVEQAIKKGAKVVWFQYN  107 (139)
T ss_dssp             -----------------------------HHHHHHHHHHHHHHTCSEEEECTT
T ss_pred             -----------------------------HHHHHHHHHHHHHhCCCEEEEecc
Confidence                                         334678888888899987776443

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.16  E-value=0.003  Score=49.14  Aligned_cols=72  Identities=18%  Similarity=0.185  Sum_probs=50.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCC-CCcEEEccCCCccc----HHHHh--cCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGG-ADDLFIGDIRDSNS----IIPAI--QGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~----~~~~l--~~~d~Vi~  153 (331)
                      ..+|+|+|+ |.+|...++.+...  | .+|+++++++++++...+ ....+. |..+.+.    +.+..  .++|+++.
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~--G~~~Vi~vd~~~~kl~~Ak~~GA~~~i-n~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSA--GASRIIGIDLNKDKFEKAMAVGATECI-SPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHHTCSEEE-CGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHc--CCceEEEecCcHHHHHHHHhcCCcEEE-CccccchHHHHHHHHhccccceEEEE
Confidence            457999986 99999999999998  7 589999999988765332 222221 3333222    22222  37999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      +.|.
T Consensus       106 ~~g~  109 (176)
T d1d1ta2         106 VIGH  109 (176)
T ss_dssp             CSCC
T ss_pred             eCCc
Confidence            9984

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.15  E-value=0.019  Score=41.04  Aligned_cols=83  Identities=14%  Similarity=0.209  Sum_probs=56.5

Q ss_pred             CeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCC
Q 046297           83 STVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVP  159 (331)
Q Consensus        83 ~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~  159 (331)
                      |+|.|+|++   +..|..+.+.|++.  ||+|+.+..+.+....           +.-..++.++=..+|.++-+..   
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pVnP~~~~i~G-----------~~~y~sl~~lp~~~D~vvi~vp---   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEIEG-----------LKCYRSVRELPKDVDVIVFVVP---   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEETT-----------EECBSSGGGSCTTCCEEEECSC---
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEEccccccccC-----------ccccccchhccccceEEEEEeC---
Confidence            579999988   67999999999999  9998877654332211           1111223333346798887654   


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                                                  -..+..+++.|.+.|++.+++-
T Consensus        66 ----------------------------~~~~~~~l~~~~~~g~k~v~~~   87 (116)
T d1y81a1          66 ----------------------------PKVGLQVAKEAVEAGFKKLWFQ   87 (116)
T ss_dssp             ----------------------------HHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ----------------------------HHHHHHHHHHHHhcCCceEEec
Confidence                                        2336678888888999877653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.11  E-value=0.031  Score=45.50  Aligned_cols=95  Identities=18%  Similarity=0.061  Sum_probs=60.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh--------------------------cCCCCcEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK--------------------------IGGADDLFIGD  134 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~--------------------------l~~~~~~v~~D  134 (331)
                      ..+|+|.|+ |.+|+++++.|.+.  |. ++++++.+.=....                          +.+.+.+...+
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~--Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASA--GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHc--CCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            568999995 89999999999999  77 56677654311111                          12224444444


Q ss_pred             CC-CcccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEc
Q 046297          135 IR-DSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVG  210 (331)
Q Consensus       135 l~-d~~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~S  210 (331)
                      .. +.+.....+...|+|+.+..                              |......+-++|.++++ .+|+.+
T Consensus       107 ~~~~~~~~~~~~~~~divid~~d------------------------------~~~~~~~in~~~~~~~i-p~i~g~  152 (247)
T d1jw9b_         107 ALLDDAELAALIAEHDLVLDCTD------------------------------NVAVRNQLNAGCFAAKV-PLVSGA  152 (247)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECCS------------------------------SHHHHHHHHHHHHHHTC-CEEEEE
T ss_pred             hhhhhccccccccccceeeeccc------------------------------hhhhhhhHHHHHHHhCC-Cccccc
Confidence            32 33445566678888887753                              34445566677888886 455533

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.10  E-value=0.0084  Score=46.41  Aligned_cols=72  Identities=18%  Similarity=0.060  Sum_probs=48.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CC-cEEEccCCCcccHHHHh-----cCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-AD-DLFIGDIRDSNSIIPAI-----QGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~-~~v~~Dl~d~~~~~~~l-----~~~d~Vi~  153 (331)
                      +.+|+|+|+ |.||...++.+...  |. +|++.++++++.+..++ .. .++...- .++...+..     .++|+||.
T Consensus        29 G~~VlV~G~-G~iGl~a~~~ak~~--Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~-~~~~~~~~~~~~~~~G~d~vie  104 (174)
T d1e3ia2          29 GSTCAVFGL-GCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKALGATDCLNPRE-LDKPVQDVITELTAGGVDYSLD  104 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGG-CSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHh--CCceeeeeccchHHHHHHHHhCCCcccCCcc-chhhhhhhHhhhhcCCCcEEEE
Confidence            467999985 99999999999999  87 67788888877554322 12 2332211 122233332     37999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      +.|.
T Consensus       105 ~~G~  108 (174)
T d1e3ia2         105 CAGT  108 (174)
T ss_dssp             SSCC
T ss_pred             eccc
Confidence            9984

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.04  E-value=0.0059  Score=48.34  Aligned_cols=65  Identities=12%  Similarity=0.045  Sum_probs=49.3

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .+++|.|.| .|.||+.+++.|..-  |.+|++.++.........         ....+++.++++.+|+|+.++..
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~f--g~~V~~~d~~~~~~~~~~---------~~~~~~l~~~l~~sDii~~~~pl  106 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGF--GAKVITYDIFRNPELEKK---------GYYVDSLDDLYKQADVISLHVPD  106 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHT---------TCBCSCHHHHHHHCSEEEECSCC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhh--cccccccCcccccccccc---------eeeeccccccccccccccccCCc
Confidence            468899999 599999999999888  999999987654332211         11234588889999999877754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.03  E-value=0.0022  Score=50.00  Aligned_cols=69  Identities=17%  Similarity=0.252  Sum_probs=47.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC---------CcEEEccCCCcccHHHHhcCCCE
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA---------DDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~---------~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      ..+++|+|.|+ |+.++.++..|.+.  | +|+++.|+.++.+.+...         ...+  ++   +++...+...|+
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~--~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~dl   86 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV--KF---SGLDVDLDGVDI   86 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE--EE---ECTTCCCTTCCE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHccc--c-ceeeehhhhhHHHHHHHHHHHhhchhhhhhh--hh---hhhhhccchhhh
Confidence            45789999996 88999999999766  6 899999998876654211         1111  11   122233457899


Q ss_pred             EEEcccC
Q 046297          151 LIILTSA  157 (331)
Q Consensus       151 Vi~~ag~  157 (331)
                      +||+...
T Consensus        87 iIn~tp~   93 (177)
T d1nvta1          87 IINATPI   93 (177)
T ss_dssp             EEECSCT
T ss_pred             hccCCcc
Confidence            9998764

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.99  E-value=0.0072  Score=47.76  Aligned_cols=72  Identities=14%  Similarity=-0.009  Sum_probs=49.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhhcCC-CCcEEEccCCCcccH---HHHhc--CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQKIGG-ADDLFIGDIRDSNSI---IPAIQ--GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~---~~~l~--~~d~Vi~~  154 (331)
                      +.+|||.|+ |.+|...+..+...  |. +|+++++++++++.... ....+ .|..+.+..   .++..  ++|++|.+
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~--ga~~Vi~~d~~~~rl~~a~~~Ga~~~-~~~~~~~~~~~i~~~t~g~g~D~vid~  101 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKAQGFEIA-DLSLDTPLHEQIAALLGEPEVDCAVDA  101 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCEEE-ETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhh--cccceeeecccchhhHhhhhccccEE-EeCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence            568999986 99998888888777  55 78888998877665433 23333 344444322   23222  68999999


Q ss_pred             ccC
Q 046297          155 TSA  157 (331)
Q Consensus       155 ag~  157 (331)
                      .|.
T Consensus       102 vG~  104 (195)
T d1kola2         102 VGF  104 (195)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            985

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.94  E-value=0.0082  Score=46.53  Aligned_cols=76  Identities=16%  Similarity=0.152  Sum_probs=55.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC-CcEEEccCC----------------------Cc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA-DDLFIGDIR----------------------DS  138 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~-~~~v~~Dl~----------------------d~  138 (331)
                      .-+|+|.|| |-.|..-++..+.-  |.+|++++.+++++++++.. ..++..+..                      ..
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~l--GA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRL--GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            357999997 99999999999999  99999999998887765432 223222111                      23


Q ss_pred             ccHHHHhcCCCEEEEcccCCCC
Q 046297          139 NSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus       139 ~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      +.+.+.+.++|+||-.+-..+.
T Consensus       106 ~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHhhhhheeeeecCCc
Confidence            4466678899999998876444

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.94  E-value=0.0053  Score=47.39  Aligned_cols=67  Identities=18%  Similarity=0.277  Sum_probs=43.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      |++.+|.|.| .|.+|+.+++.|.+.+ +.+++++.. +++....    .....     ..+.....+++|+|+.+...
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~-~~elvav~~~~~~~~~~----~~~~~-----~~~~~~~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQP-DMDLVGIFSRRATLDTK----TPVFD-----VADVDKHADDVDVLFLCMGS   68 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCS-SEEEEEEEESSSCCSSS----SCEEE-----GGGGGGTTTTCSEEEECSCT
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCC-CcEEEEEEecccccccc----ccccc-----chhhhhhccccceEEEeCCC
Confidence            4567899999 5999999999998864 888886554 4332211    12221     12233445689999987754

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.91  E-value=0.0047  Score=48.05  Aligned_cols=73  Identities=16%  Similarity=0.189  Sum_probs=46.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC-chhhh--cCCCCcEE----------EccCCCcccHHHHhcCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE-ESKQK--IGGADDLF----------IGDIRDSNSIIPAIQGID  149 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~-~~~~~--l~~~~~~v----------~~Dl~d~~~~~~~l~~~d  149 (331)
                      -||.|-| .|.||+.+++.|.+++ +.+|+++.... .....  +.......          ...+.-...+..++.++|
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~-dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQP-DMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCC-CCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            4799998 7999999999999874 78888876533 21111  11111111          011122334566677899


Q ss_pred             EEEEcccC
Q 046297          150 ALIILTSA  157 (331)
Q Consensus       150 ~Vi~~ag~  157 (331)
                      +|+-|.|.
T Consensus        80 iViecTG~   87 (178)
T d1b7go1          80 IVVDTTPN   87 (178)
T ss_dssp             EEEECCST
T ss_pred             EEEECCCC
Confidence            99999985

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.87  E-value=0.0063  Score=44.10  Aligned_cols=36  Identities=14%  Similarity=0.150  Sum_probs=32.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES  120 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~  120 (331)
                      .++|+|.|| |++|-.++..|.++  |.+|+++.|.+.-
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~--g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTA--GVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcc--cceEEEEeecccc
Confidence            578999996 99999999999999  9999999998653

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.75  E-value=0.012  Score=42.79  Aligned_cols=93  Identities=15%  Similarity=0.165  Sum_probs=61.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh-hhcCCCCcEEEccCCCcccHHHHhc-CCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK-QKIGGADDLFIGDIRDSNSIIPAIQ-GIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~-~~l~~~~~~v~~Dl~d~~~~~~~l~-~~d~Vi~~ag~~~~  160 (331)
                      .+|+|.|| |..|+.+++.+.... +|+++++.-+..+. ...-.++.+..     .+.+.+..+ .++.++.+..    
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~-~~~iv~fiDdd~~k~G~~I~Gi~V~~-----~~~l~~~~~~~i~iai~~i~----   72 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEH-----VDLLPQRVPGRIEIALLTVP----   72 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEE-----GGGHHHHSTTTCCEEEECSC----
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcC-CcEEEEEEeCchHhcCCEECCEEEec-----HHHHHHHHhhcccEEEEeCC----
Confidence            37999996 999999999876543 89999877654432 22223344442     345666654 4565555542    


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCC
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMG  213 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~  213 (331)
                                                 -...+.+++.+.+.|++.+..++...
T Consensus        73 ---------------------------~~~~~~I~d~l~~~gIk~I~~f~~~~   98 (126)
T d2dt5a2          73 ---------------------------REAAQKAADLLVAAGIKGILNFAPVV   98 (126)
T ss_dssp             ---------------------------HHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             ---------------------------HHHHHHHHHHHHHcCCCEEeecCcee
Confidence                                       23357899999999999887765543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.73  E-value=0.0076  Score=43.25  Aligned_cols=35  Identities=17%  Similarity=0.117  Sum_probs=32.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++++|.|| |++|-.++..|.+.  |.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~--G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANF--GTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred             CCeEEEECC-Cccceeeeeeeccc--ccEEEEEEecce
Confidence            478999997 99999999999999  999999999764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.67  E-value=0.012  Score=46.06  Aligned_cols=65  Identities=6%  Similarity=-0.059  Sum_probs=48.6

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...++|.|.| .|.||+.+++.|..-  |.+|+..++......     ....     ..+.+.++++.+|+|+.++..
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~-----~~~~-----~~~~l~ell~~sDii~i~~pl  106 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAESL--GMYVYFYDIENKLPL-----GNAT-----QVQHLSDLLNMSDVVSLHVPE  106 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSCCCCC-----TTCE-----ECSCHHHHHHHCSEEEECCCS
T ss_pred             ccceEEEEee-cccchhhhhhhcccc--cceEeeccccccchh-----hhhh-----hhhhHHHHHhhccceeecccC
Confidence            3467899997 699999999999888  999999998643221     1111     124578889999999887764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.65  E-value=0.01  Score=45.69  Aligned_cols=70  Identities=20%  Similarity=0.291  Sum_probs=47.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCC-CeEEEEecCCchhhhcCCC--CcEEEccCCCcccHHHHhc-----CCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQ-YAARGLVRTEESKQKIGGA--DDLFIGDIRDSNSIIPAIQ-----GIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g-~~V~~l~R~~~~~~~l~~~--~~~v~~Dl~d~~~~~~~l~-----~~d~Vi~  153 (331)
                      ..+|+|.|+ |.+|...++.+...  | .+|+++++++++.+.....  .+++  |..+ +.+.+.++     ++|+||.
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~--g~~~vv~~~~~~~k~~~~~~~ga~~~i--~~~~-~~~~~~~~~~~~~g~d~vid  106 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVM--TPATVIALDVKEEKLKLAERLGADHVV--DARR-DPVKQVMELTRGRGVNVAMD  106 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--CCCEEEEEESSHHHHHHHHHTTCSEEE--ETTS-CHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhh--cCcccccccchhHHHHHHhhcccceee--cCcc-cHHHHHHHhhCCCCceEEEE
Confidence            467999986 99999999998888  6 4677788888776654331  3333  3332 23333332     6899999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      ++|.
T Consensus       107 ~~g~  110 (172)
T d1h2ba2         107 FVGS  110 (172)
T ss_dssp             SSCC
T ss_pred             ecCc
Confidence            9984

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.61  E-value=0.0095  Score=45.46  Aligned_cols=71  Identities=14%  Similarity=0.158  Sum_probs=48.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcc---cHHHHhcCCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSN---SIIPAIQGIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~---~~~~~l~~~d~Vi~~ag  156 (331)
                      +.+|+|.|+ |.+|...++.+...  |++|+++++++++.+..+. ..+.+ .|..+.+   .+.+.-.+.|.+|.+++
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~--g~~v~~~~~~~~r~~~~k~~Ga~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCEEEEeec-ccchhhhhHHHhcC--CCeEeccCCCHHHhhhhhhcCccee-cccccchhhhhcccccCCCceEEeecC
Confidence            567999875 99999988888888  9999999999888765543 23333 3333332   23444456777777765

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.60  E-value=0.0099  Score=43.09  Aligned_cols=36  Identities=14%  Similarity=0.140  Sum_probs=32.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      ..++|+|.|| |++|-.++..|.+.  |++|+++.|.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~--g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKA--GKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhcc--ceEEEEEEecCc
Confidence            4578999986 99999999999999  999999998754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.57  E-value=0.011  Score=46.11  Aligned_cols=67  Identities=16%  Similarity=0.063  Sum_probs=49.3

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..++++.|.| .|.||+.+++.|..-  |.+|++.+|...+.......+        ...++.++++.+|+|+.+...
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~f--g~~v~~~d~~~~~~~~~~~~~--------~~~~l~ell~~sDiv~~~~Pl  108 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAF--GAYVVAYDPYVSPARAAQLGI--------ELLSLDDLLARADFISVHLPK  108 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECTTSCHHHHHHHTC--------EECCHHHHHHHCSEEEECCCC
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhc--cceEEeecCCCChhHHhhcCc--------eeccHHHHHhhCCEEEEcCCC
Confidence            3467888988 599999999999888  999999998765433221111        123577889999999877654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.56  E-value=0.013  Score=44.56  Aligned_cols=67  Identities=15%  Similarity=0.041  Sum_probs=51.7

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ...|+|+|.| .|.||+.+++.|...  |.+|++..+++-+ ++.....        .....+.+++...|+++-+.|.
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg~--G~~V~v~e~dp~~al~A~~dG--------~~v~~~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRGF--GARVIITEIDPINALQAAMEG--------YEVTTMDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTT--------CEECCHHHHTTTCSEEEECSSC
T ss_pred             ecCCEEEEec-cccccHHHHHHHHhC--CCeeEeeecccchhHHhhcCc--------eEeeehhhhhhhccEEEecCCC
Confidence            3578899998 799999999999999  9999999998744 2322222        2233477888899999988884

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.55  E-value=0.0063  Score=46.29  Aligned_cols=71  Identities=17%  Similarity=0.120  Sum_probs=41.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEE-ecCCchhh-hc--CCCCcEEEccCCCcccHHHH--hcCCCEEEEcc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGL-VRTEESKQ-KI--GGADDLFIGDIRDSNSIIPA--IQGIDALIILT  155 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l-~R~~~~~~-~l--~~~~~~v~~Dl~d~~~~~~~--l~~~d~Vi~~a  155 (331)
                      +.+|.|+| +|.+|+.+...+++..+..+++++ +|+.+... ..  ..++.+....   .+++.+.  +.++|+||.+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~---~d~l~~~~~~~~iDiVf~AT   79 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAG---VEGLIKLPEFADIDFVFDAT   79 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSH---HHHHHHSGGGGGEEEEEECS
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccc---eeeeeecccccccCEEEEcC
Confidence            45899999 899998765555555457788776 46544221 11  1223333221   2333332  34789999875


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      .
T Consensus        80 p   80 (157)
T d1nvmb1          80 S   80 (157)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.50  E-value=0.009  Score=42.95  Aligned_cols=35  Identities=11%  Similarity=0.140  Sum_probs=31.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++|+|.|| |++|-.++..|.+.  |.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~--g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRL--GIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTT--TCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhc--cccceeeehhcc
Confidence            578999997 99999999999999  999999999754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.052  Score=48.01  Aligned_cols=70  Identities=17%  Similarity=0.091  Sum_probs=46.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchhhh--------------------------cCCC--CcEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESKQK--------------------------IGGA--DDLFI  132 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~~~--------------------------l~~~--~~~v~  132 (331)
                      ..||||+|+ |.+|.++++.|+..  |. ++++++.+.=....                          +.+.  +..+.
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~--Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALS--GFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTT--TCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHc--CCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            457999998 77999999999999  76 67777764311111                          1122  33444


Q ss_pred             ccCCCcccHHHHhcCCCEEEEccc
Q 046297          133 GDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus       133 ~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      .++.+..  .+.++++|+|+.+..
T Consensus       114 ~~i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         114 NKIQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             SCGGGBC--HHHHTTCSEEEECCS
T ss_pred             ccccchH--HHHHHhcchheeccC
Confidence            4444433  356788999998764

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.37  E-value=0.01  Score=45.44  Aligned_cols=110  Identities=14%  Similarity=0.051  Sum_probs=59.6

Q ss_pred             CeEEEECCCChhHHHH-HHHHHhcCCCCeEEEEecCCchhhhcCCC--CcEEEccCCCcccHHHHh-cCCCEEEEcccCC
Q 046297           83 STVLVTGAGGRTGQIV-YKKLKERSEQYAARGLVRTEESKQKIGGA--DDLFIGDIRDSNSIIPAI-QGIDALIILTSAV  158 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l-~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~--~~~v~~Dl~d~~~~~~~l-~~~d~Vi~~ag~~  158 (331)
                      ++|.|+|+ |.+|+.. ...|.+. ++.+++++++++++...+...  ...+..|   .+   +++ .++|+|+.+....
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---~~---~ll~~~iD~V~I~tp~~   73 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRYRVSATCTD---YR---DVLQYGVDAVMIHAATD   73 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHTTCCCCCSS---TT---GGGGGCCSEEEECSCGG
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHhccccccccc---HH---Hhcccccceeccccccc
Confidence            57999995 8888764 4555443 477888888887766654332  2112222   22   233 3789988765321


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAK  204 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk  204 (331)
                      ........-.....+ ..   -+++...+......++++++++++.
T Consensus        74 ~H~~~~~~al~~gk~-V~---~EKP~~~~~~e~~~l~~~a~~~~~~  115 (167)
T d1xeaa1          74 VHSTLAAFFLHLGIP-TF---VDKPLAASAQECENLYELAEKHHQP  115 (167)
T ss_dssp             GHHHHHHHHHHTTCC-EE---EESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             ccccccccccccccc-cc---cCCCCcCCHHHHHHHHHHHHHcCCE
Confidence            000000000000000 00   1344566788888899998888764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.37  E-value=0.011  Score=42.27  Aligned_cols=35  Identities=17%  Similarity=0.081  Sum_probs=31.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++|+|.|| |++|-.++..|.+.  |++|+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~--G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGL--GAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhcc--ccEEEEEeecch
Confidence            468999996 99999999999999  999999999764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.33  E-value=0.012  Score=45.38  Aligned_cols=72  Identities=17%  Similarity=0.142  Sum_probs=47.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CC-cEEEccCCCccc-HHHHh-----cCCCEEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-AD-DLFIGDIRDSNS-IIPAI-----QGIDALII  153 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~-~~v~~Dl~d~~~-~~~~l-----~~~d~Vi~  153 (331)
                      ..+|+|.|+ |.+|...+..+.... +.+|+++++++++.+...+ .. +++  |..+.+. ..+..     .++|+++.
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g-~~~Vi~~~~~~~rl~~a~~~GAd~~i--n~~~~~~~~~~~~~~~~~~G~d~vid  104 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAKVFGATDFV--NPNDHSEPISQVLSKMTNGGVDFSLE  104 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHHTTCCEEE--CGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCEEEEEec-CCccchHHHHHHHHh-hchheeecchHHHHHHHHHcCCcEEE--cCCCcchhHHHHHHhhccCCcceeee
Confidence            467999997 667777777777762 5679999999888765433 22 333  4433322 22222     27999999


Q ss_pred             cccC
Q 046297          154 LTSA  157 (331)
Q Consensus       154 ~ag~  157 (331)
                      +.|.
T Consensus       105 ~~G~  108 (175)
T d1cdoa2         105 CVGN  108 (175)
T ss_dssp             CSCC
T ss_pred             ecCC
Confidence            9984

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.31  E-value=0.03  Score=42.58  Aligned_cols=59  Identities=15%  Similarity=0.120  Sum_probs=46.5

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      +..+++|+|.|.+.-+|+-++..|.++  |++|+.+.....                    .+.+.++++|+||..+|..
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~--gatVt~~h~~t~--------------------~l~~~~~~ADivI~a~G~p   91 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRFTK--------------------NLRHHVENADLLIVAVGKP   91 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSSCS--------------------CHHHHHHHCSEEEECSCCT
T ss_pred             ccccceEEEEeccccccHHHHHHHHHh--hccccccccccc--------------------hhHHHHhhhhHhhhhccCc
Confidence            345899999999999999999999999  999998866432                    2445566778888888754


Q ss_pred             C
Q 046297          159 P  159 (331)
Q Consensus       159 ~  159 (331)
                      .
T Consensus        92 ~   92 (166)
T d1b0aa1          92 G   92 (166)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.28  E-value=0.01  Score=46.70  Aligned_cols=68  Identities=13%  Similarity=0.073  Sum_probs=49.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..+++|.|.| .|.||+.+++.|..-  |.+|++.++..........       ++...+++.++++.+|+|+.+...
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~-------~~~~~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAF--GFNVLFYDPYLSDGVERAL-------GLQRVSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECTTSCTTHHHHH-------TCEECSSHHHHHHHCSEEEECCCC
T ss_pred             eeCceEEEec-cccccccceeeeecc--ccceeeccCcccccchhhh-------ccccccchhhccccCCEEEEeecc
Confidence            3578999998 599999999999988  9999999986543221110       122234678888899999777654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.23  E-value=0.013  Score=42.37  Aligned_cols=36  Identities=8%  Similarity=-0.007  Sum_probs=32.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES  120 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~  120 (331)
                      .++++|.|| |+||-.++..|.+.  |++|+++.|.+.-
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~l--G~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRL--GSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhh--CcceeEEEecccc
Confidence            478999996 99999999999999  9999999997643

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.22  E-value=0.015  Score=41.47  Aligned_cols=35  Identities=14%  Similarity=0.128  Sum_probs=31.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++++|.|| |++|-.++..|.+.  |++|+++.|.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~--g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKL--GAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhc--ccceEEEeeecc
Confidence            468999996 99999999999999  999999999754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.21  E-value=0.011  Score=42.77  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=31.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++|+|.|| |++|-.++..|.+.  |++|+++.|.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~--g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEA--GYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHT--TCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcc--cceEEEEecccc
Confidence            367999996 99999999999999  999999998753

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.13  E-value=0.079  Score=40.54  Aligned_cols=74  Identities=14%  Similarity=0.190  Sum_probs=47.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec-CCchh-hhc-CCCCcEEEccC-----------CCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR-TEESK-QKI-GGADDLFIGDI-----------RDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R-~~~~~-~~l-~~~~~~v~~Dl-----------~d~~~~~~~l~~  147 (331)
                      .+||.|-| -|.||+.+++.|++++ ..+|+++.- ++... ..+ ......+..+.           .....+..++++
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~-dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQD-DMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCC-CceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence            46899999 5999999999998863 678776654 33221 111 22223333221           223356666779


Q ss_pred             CCEEEEcccC
Q 046297          148 IDALIILTSA  157 (331)
Q Consensus       148 ~d~Vi~~ag~  157 (331)
                      +|+|+-|.|.
T Consensus        80 vDvViEcTG~   89 (172)
T d2czca2          80 VDIIVDATPG   89 (172)
T ss_dssp             CSEEEECCST
T ss_pred             CCEEEECCCC
Confidence            9999999995

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.11  E-value=0.017  Score=45.67  Aligned_cols=64  Identities=19%  Similarity=0.104  Sum_probs=47.7

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .+++|.|.| .|.||+.+++.|..-  |.+|++.++.......  ...        +..++.++++.+|+|+.+...
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~--~~~--------~~~~l~~l~~~~D~v~~~~pl  107 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGF--GAKVIAYDPYPMKGDH--PDF--------DYVSLEDLFKQSDVIDLHVPG  107 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSCCSSCC--TTC--------EECCHHHHHHHCSEEEECCCC
T ss_pred             cceeeeeee-ccccccccccccccc--ceeeeccCCccchhhh--cch--------hHHHHHHHHHhcccceeeecc
Confidence            367899999 599999999999988  9999999986543211  111        123577888889999877643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.016  Score=42.00  Aligned_cols=35  Identities=14%  Similarity=0.173  Sum_probs=31.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++++|.|| |+||-.++..|.+.  |.+|+++.|++.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~--G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSAL--GSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcC--CcEEEEEeeccc
Confidence            468999997 99999999999999  999999999764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.96  E-value=0.14  Score=34.39  Aligned_cols=67  Identities=13%  Similarity=0.086  Sum_probs=45.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCC-CCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGG-ADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~-~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      |+|-++|-.|-==+.||+.|+++  ||.|.+.++.+.. .+.|.. ++.+..+  .+++.    ++++|.||...+.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~--G~~VsGSD~~~~~~t~~L~~~Gi~i~~g--h~~~~----i~~~d~vV~SsAI   70 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSN--GNDVYGSNIEETERTAYLRKLGIPIFVP--HSADN----WYDPDLVIKTPAV   70 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCCEESS--CCTTS----CCCCSEEEECTTC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhC--CCeEEEEeCCCChhHHHHHHCCCeEEee--ecccc----cCCCCEEEEecCc
Confidence            67888875433334789999999  9999999998644 333433 4555543  22332    3678999988876

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.93  E-value=0.016  Score=41.91  Aligned_cols=33  Identities=21%  Similarity=0.129  Sum_probs=30.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT  117 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~  117 (331)
                      .++++|+|| |+||-.++..|.+.  |.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~l--G~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGI--GLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhc--CCeEEEEEec
Confidence            457999997 99999999999999  9999999875

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.92  E-value=0.023  Score=40.74  Aligned_cols=35  Identities=17%  Similarity=0.068  Sum_probs=32.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++++|+|| |+||-.++..|.+.  |++|+++.|.+.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~--G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARL--GAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHc--CCceEEEEeecc
Confidence            578999996 99999999999999  999999999764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.92  E-value=0.019  Score=44.94  Aligned_cols=69  Identities=12%  Similarity=0.007  Sum_probs=49.4

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      -..++|.|.| .|.||+.+++.|..-  |.+|...+|..........      ..+....++.++++.+|+|+.+...
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~------~~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          42 LEAMHVGTVA-AGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKE------LNLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHH------HTCEECSSHHHHGGGCSEEEECSCC
T ss_pred             ccccceeecc-ccccchhhhhhhhcc--CceEEEEeecccccccccc------ccccccCCHHHHHHhccchhhcccc
Confidence            3467899999 599999999999988  9999999986533221110      0122245677889999999777654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.89  E-value=0.018  Score=42.24  Aligned_cols=36  Identities=17%  Similarity=0.146  Sum_probs=32.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES  120 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~  120 (331)
                      .++|+|.|| |++|-.++..|.+.  |++|+++.|.+.-
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~--g~~Vtvie~~~~~   70 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKA--NMHVTLLDTAARV   70 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSST
T ss_pred             CCEEEEECC-chHHHHHHHHHHhh--Ccceeeeeecccc
Confidence            578999996 99999999999999  9999999998653

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=94.84  E-value=0.04  Score=41.70  Aligned_cols=110  Identities=13%  Similarity=0.053  Sum_probs=58.5

Q ss_pred             CeEEEECCCChhHHH-HHHHHHhcCCCCeEEE-EecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCCCC
Q 046297           83 STVLVTGAGGRTGQI-VYKKLKERSEQYAARG-LVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAVPK  160 (331)
Q Consensus        83 ~~VlVtGatG~iG~~-l~~~Ll~~~~g~~V~~-l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~~~  160 (331)
                      ++|.|+|. |.+|+. ....|.+. ++.++++ +++++++...+.....   .+.  .+.+.++++++|+|+.+......
T Consensus         2 iri~iIG~-G~~g~~~~~~~l~~~-~~~~i~~v~d~~~~~~~~~~~~~~---~~~--~~~~~~l~~~~D~V~I~tp~~~h   74 (164)
T d1tlta1           2 LRIGVVGL-GGIAQKAWLPVLAAA-SDWTLQGAWSPTRAKALPICESWR---IPY--ADSLSSLAASCDAVFVHSSTASH   74 (164)
T ss_dssp             EEEEEECC-STHHHHTHHHHHHSC-SSEEEEEEECSSCTTHHHHHHHHT---CCB--CSSHHHHHTTCSEEEECSCTTHH
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHhC-CCcEEEEEEechhHhhhhhhhccc---ccc--cccchhhhhhcccccccccchhc
Confidence            57999994 899975 45555543 3788775 5566666554432111   112  23355566889998877532100


Q ss_pred             CCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC
Q 046297          161 MKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA  203 (331)
Q Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v  203 (331)
                      ...  -......-...+  -++++..+..-...++++++++|+
T Consensus        75 ~~~--~~~al~~gk~V~--~EKPla~~~~e~~~l~~~a~~~~~  113 (164)
T d1tlta1          75 FDV--VSTLLNAGVHVC--VDKPLAENLRDAERLVELAARKKL  113 (164)
T ss_dssp             HHH--HHHHHHTTCEEE--EESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             ccc--ccccccccceee--ccccccCCHHHHHHHHHHHHHcCC
Confidence            000  000000000000  134445677777888888888775

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.65  E-value=0.02  Score=46.54  Aligned_cols=37  Identities=14%  Similarity=0.187  Sum_probs=32.9

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES  120 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~  120 (331)
                      +.+||+|+|| |..|..++..|.++  |++|+++.|+++.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~--G~~v~v~Er~~~~   39 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDA--GVDVDVYERSPQP   39 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence            4578999997 99999999999999  9999999987643

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.57  E-value=0.02  Score=41.37  Aligned_cols=36  Identities=17%  Similarity=0.064  Sum_probs=32.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES  120 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~  120 (331)
                      .++++|.|| |+||-.++..|.+.  |.+|+++.|++.-
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~--G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRI--GSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhc--CCeEEEEEEcccc
Confidence            468999996 99999999999999  9999999998754

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.55  E-value=0.021  Score=44.81  Aligned_cols=68  Identities=12%  Similarity=0.051  Sum_probs=48.5

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .++++.|.|. |.||+.+++.|..-  |.+|...++..........      ......+++.++++.+|+|+.+...
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~------~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGF--DMDIDYFDTHRASSSDEAS------YQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHH------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhh--ccccccccccccccchhhc------ccccccCCHHHHHhhCCeEEecCCC
Confidence            4688999995 99999999999988  9999999886543221100      0111234578889999999777654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.54  E-value=0.022  Score=46.08  Aligned_cols=34  Identities=26%  Similarity=0.325  Sum_probs=31.2

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      .++|+|+|| |..|-..+..|.++  |++|+++.|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~--G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARK--GYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence            468999997 99999999999999  99999999864

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.54  E-value=0.044  Score=35.98  Aligned_cols=52  Identities=15%  Similarity=0.131  Sum_probs=39.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRD  137 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d  137 (331)
                      +|+|.|.|| |.+|+-++..-.+-  |++|++++-+++..... ...+++..++.+
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~L--G~~v~vldp~~~~pa~~-~a~dvIT~e~E~   52 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPL--GIAVWPVGLDAEPAAVP-FQQSVITAEIER   52 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGG--TEEEEEECTTSCGGGSC-GGGSEEEESSSC
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHc--CCEEEEEcCCCCCcccc-cccceEEEeecc
Confidence            468999996 99999999999999  99999999876543221 124667777664

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.48  E-value=0.26  Score=33.50  Aligned_cols=67  Identities=16%  Similarity=0.348  Sum_probs=46.0

Q ss_pred             CCeEEEECCCChhH-HHHHHHHHhcCCCCeEEEEecCCch-hhhc-CCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           82 KSTVLVTGAGGRTG-QIVYKKLKERSEQYAARGLVRTEES-KQKI-GGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        82 ~~~VlVtGatG~iG-~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l-~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      .++|.+.|- |++| +.||+.|+++  ||+|.+.++.... .+.+ ..++.+..++-  ++    .+++.|.||...+.
T Consensus         8 ~~~ihfiGi-gG~GMs~LA~~L~~~--G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~--~~----~i~~~d~vV~S~AI   77 (96)
T d1p3da1           8 VQQIHFIGI-GGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQAGAKIYIGHA--EE----HIEGASVVVVSSAI   77 (96)
T ss_dssp             CCEEEEETT-TSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHHTTCEEEESCC--GG----GGTTCSEEEECTTS
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhHHHHCCCeEEECCc--cc----cCCCCCEEEECCCc
Confidence            567888875 4455 7789999999  9999999997543 2233 33455554332  22    34678999888775

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.40  E-value=0.027  Score=42.80  Aligned_cols=36  Identities=19%  Similarity=0.211  Sum_probs=30.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      .|+|+|+|| |++|-.++..|.+..+..+|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            579999997 999999999999984446889888765

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.32  E-value=0.022  Score=43.71  Aligned_cols=79  Identities=10%  Similarity=0.067  Sum_probs=54.7

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCC---CcEEEccC--CCcccHHHHhcCCCEEEE
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGA---DDLFIGDI--RDSNSIIPAIQGIDALII  153 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~---~~~v~~Dl--~d~~~~~~~l~~~d~Vi~  153 (331)
                      +..+++|+|.|-+.-+|+-++..|+++  |.+|+.+..+..........   ......|+  ..++.+++....+|+||.
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~--gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHC--CCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence            445789999999999999999999999  99999887653221111111   11122233  234567888888999999


Q ss_pred             cccCCC
Q 046297          154 LTSAVP  159 (331)
Q Consensus       154 ~ag~~~  159 (331)
                      .+|...
T Consensus       104 avG~p~  109 (171)
T d1edza1         104 GVPSEN  109 (171)
T ss_dssp             CCCCTT
T ss_pred             ccCCCc
Confidence            998643

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.27  E-value=0.031  Score=40.48  Aligned_cols=35  Identities=11%  Similarity=0.061  Sum_probs=31.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++++|.|| |+||-.++..|.+.  |.+|+++.|.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~--G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTL--GSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcC--CCEEEEEEeecc
Confidence            468999996 99999999999999  999999999764

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.25  E-value=0.082  Score=39.59  Aligned_cols=35  Identities=26%  Similarity=0.115  Sum_probs=28.0

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ  122 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~  122 (331)
                      ||.++| .|.+|..+++.|++.  |+.+ ...|+.++..
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~--g~~~-~~~~~~~~~~   36 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARR--FPTL-VWNRTFEKAL   36 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTT--SCEE-EECSSTHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhC--CCEE-EEeCCHHHHH
Confidence            588888 599999999999998  8866 5677765543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.16  E-value=0.072  Score=40.12  Aligned_cols=66  Identities=14%  Similarity=0.016  Sum_probs=52.0

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCch-hhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEES-KQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSA  157 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~-~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~  157 (331)
                      ..|+++|.| =|.+|+.++++|...  |.+|+++..+|-+ ++...+..+        ...+.++++..|++|-..|.
T Consensus        22 aGk~vvV~G-YG~vGrG~A~~~rg~--Ga~V~V~E~DPi~alqA~mdGf~--------v~~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          22 SGKIVVICG-YGDVGKGCASSMKGL--GARVYITEIDPICAIQAVMEGFN--------VVTLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTTCE--------ECCHHHHTTTCSEEEECCSS
T ss_pred             cCCEEEEec-ccccchhHHHHHHhC--CCEEEEEecCchhhHHHHhcCCc--------cCchhHccccCcEEEEcCCC
Confidence            478899998 599999999999999  9999999998844 333333332        23467889999999999985

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.09  E-value=0.033  Score=43.52  Aligned_cols=35  Identities=14%  Similarity=0.153  Sum_probs=30.7

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      |||+|+|| |++|-.++..|.+..++.+|+++.|.+
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999997 999999999999886678899998864

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.07  E-value=0.028  Score=42.07  Aligned_cols=37  Identities=16%  Similarity=0.317  Sum_probs=31.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      |++|.|.|+||-||....+.+.+.+..++|++++-+.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            5689999999999999999998876578999887643

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.07  E-value=0.039  Score=43.48  Aligned_cols=67  Identities=16%  Similarity=0.047  Sum_probs=48.8

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-CCcEEEccCCCcccHHHHhc-CCCEEEEccc
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-ADDLFIGDIRDSNSIIPAIQ-GIDALIILTS  156 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-~~~~v~~Dl~d~~~~~~~l~-~~d~Vi~~ag  156 (331)
                      +..+++|+|-| -|.+|+++++.|.+.  |.+|++.+.+.+....... ..+.+     +.+   +++. .||+++-||.
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~--Gakvvv~d~d~~~~~~~~~~g~~~~-----~~~---~~~~~~~DI~iPcA~   92 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEA--GAQLLVADTDTERVAHAVALGHTAV-----ALE---DVLSTPCDVFAPCAM   92 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEEC-----CGG---GGGGCCCSEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEecchHHHHHHHHhhccccc-----Ccc---ccccccceeeecccc
Confidence            34578999998 699999999999999  9999999888766544321 12221     222   3444 7999998875

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.02  E-value=0.046  Score=42.21  Aligned_cols=114  Identities=17%  Similarity=0.193  Sum_probs=61.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEE-EecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARG-LVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVP  159 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~  159 (331)
                      .+|.|+|+ |.+|+..++.|... ++.+|++ +++++++.+.+.....+ ..+..-.++++++++  ++|+|+.+.....
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~-~~~~i~ai~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~~iD~v~I~tp~~~   78 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANNY-PESTKIHGSYESLLEDPEIDALYVPLPTSL   78 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTTC-CTTCEEESSHHHHHHCTTCCEEEECCCGGG
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhC-CCCEEEEEEeCCccccccchhcccc-ccceeecCcHHHhhhccccceeeecccchh
Confidence            57999995 89999999998775 3778885 46776654443221110 000001234556664  6899987653210


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC
Q 046297          160 KMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA  203 (331)
Q Consensus       160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v  203 (331)
                      .......-....- ...   -+++...+......+++.+++.++
T Consensus        79 h~~~~~~~l~~g~-~v~---~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          79 HVEWAIKAAEKGK-HIL---LEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             HHHHHHHHHTTTC-EEE---ECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             hcchhhhhhhccc-eee---cccccccCHHHHHHHHHHHHhhCC
Confidence            0000000000000 000   144556678888889988888776

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=93.97  E-value=0.19  Score=36.67  Aligned_cols=106  Identities=19%  Similarity=0.230  Sum_probs=66.4

Q ss_pred             CCeEEEECCC---ChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEcccCC
Q 046297           82 KSTVLVTGAG---GRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTSAV  158 (331)
Q Consensus        82 ~~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag~~  158 (331)
                      .+.|.|+||+   +..|..+++.|++.  ||+++.+.-++.. ....+    +.+    ..++.++-..+|.|+-+..  
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~--g~~~~~v~~~~~~-~~i~g----~~~----~~~l~~i~~~iD~v~v~~p--   79 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQ--GYRVLPVNPRFQG-EELFG----EEA----VASLLDLKEPVDILDVFRP--   79 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHT--TCEEEEECGGGTT-SEETT----EEC----BSSGGGCCSCCSEEEECSC--
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcC--CCCceEEEecccc-ceeec----eec----ccchhhccCCCceEEEecc--
Confidence            4679999998   57899999999999  9998877654321 11111    111    1112222246788887763  


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCCCCCCCCCCCCCcchHHHHHHHHHH
Q 046297          159 PKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQ  238 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~  238 (331)
                                                   -..+..+++.|.+.|++.+++.+..  .+                 ..+.+
T Consensus        80 -----------------------------~~~v~~~v~~~~~~g~k~i~~q~G~--~~-----------------~e~~~  111 (136)
T d1iuka_          80 -----------------------------PSALMDHLPEVLALRPGLVWLQSGI--RH-----------------PEFEK  111 (136)
T ss_dssp             -----------------------------HHHHTTTHHHHHHHCCSCEEECTTC--CC-----------------HHHHH
T ss_pred             -----------------------------HHHHHHHHHHHHhhCCCeEEEecCc--cC-----------------HHHHH
Confidence                                         2234567777888899877663321  11                 13466


Q ss_pred             HHHhcCCCEE
Q 046297          239 YLADSGIPYT  248 (331)
Q Consensus       239 ~~~~~~~~~~  248 (331)
                      ++++.|++++
T Consensus       112 ~a~~~Gi~vV  121 (136)
T d1iuka_         112 ALKEAGIPVV  121 (136)
T ss_dssp             HHHHTTCCEE
T ss_pred             HHHHcCCEEE
Confidence            7778888776

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.93  E-value=0.03  Score=41.85  Aligned_cols=35  Identities=17%  Similarity=0.219  Sum_probs=31.1

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT  117 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~  117 (331)
                      ..+++|||+|| |.+|..-++.|++.  |.+|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~--GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPT--GCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGG--TCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCC
Confidence            34789999998 99999999999999  9999999653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.87  E-value=0.089  Score=40.19  Aligned_cols=70  Identities=16%  Similarity=0.109  Sum_probs=46.4

Q ss_pred             CCeEEEECCCChhHHH--HHHHHHhcC--CCCeEEEEecCCchhhhc-----------CCCCcEEEccCCCcccHHHHhc
Q 046297           82 KSTVLVTGAGGRTGQI--VYKKLKERS--EQYAARGLVRTEESKQKI-----------GGADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~--l~~~Ll~~~--~g~~V~~l~R~~~~~~~l-----------~~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      .+||.|.|| |.+|..  ++..|+...  .+.+++.+++++++.+..           ....++     ....+..++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i-----~~~td~~eaL~   75 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKF-----EKTMNLDDVII   75 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEE-----EEESCHHHHHT
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEE-----EEeCChhhccc
Confidence            478999997 888865  344455431  146999999998765431           111222     22345778999


Q ss_pred             CCCEEEEcccC
Q 046297          147 GIDALIILTSA  157 (331)
Q Consensus       147 ~~d~Vi~~ag~  157 (331)
                      ++|+|++.++.
T Consensus        76 dad~Vv~~~~~   86 (171)
T d1obba1          76 DADFVINTAMV   86 (171)
T ss_dssp             TCSEEEECCCT
T ss_pred             CCCeEeeeccc
Confidence            99999999875

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.84  E-value=0.03  Score=43.38  Aligned_cols=35  Identities=17%  Similarity=0.175  Sum_probs=31.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~~  119 (331)
                      .+||+|+|| |..|-..+..|.++  |++ |+++.|++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~--G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARL--GYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHT--TCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHC--CCCeEEEEEecCc
Confidence            578999997 99999999999999  985 999998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.76  E-value=0.053  Score=38.65  Aligned_cols=35  Identities=31%  Similarity=0.211  Sum_probs=31.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .++|+|.|| |++|-.++..|.+.  |.+|+++.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~--g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNAT--GRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhc--chhheEeeccch
Confidence            578999996 99999999999999  999999999764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.72  E-value=0.39  Score=36.36  Aligned_cols=74  Identities=18%  Similarity=0.282  Sum_probs=46.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC-Cchh-hh-cCCCCcEEEcc-----------CCCcccHHHHhcC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT-EESK-QK-IGGADDLFIGD-----------IRDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~-~~~~-~~-l~~~~~~v~~D-----------l~d~~~~~~~l~~  147 (331)
                      |++|.|-| -|.||+.+++.|++++ +.+|+++.-. +... .. +.........+           +.-...+..++++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~-di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~   78 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQD-DMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE   78 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSS-SEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCC-CceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcC
Confidence            46899998 7999999999998873 5777766543 2221 11 11122222111           1112346666789


Q ss_pred             CCEEEEcccC
Q 046297          148 IDALIILTSA  157 (331)
Q Consensus       148 ~d~Vi~~ag~  157 (331)
                      +|+|+-|.|.
T Consensus        79 vDvViEcTG~   88 (171)
T d1cf2o1          79 ADIVIDCTPE   88 (171)
T ss_dssp             CSEEEECCST
T ss_pred             CCEEEEccCC
Confidence            9999999985

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.67  E-value=0.088  Score=40.08  Aligned_cols=42  Identities=12%  Similarity=0.036  Sum_probs=35.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ  122 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~  122 (331)
                      +..+++|+|.|.+.-+|+-++..|+++  |.+|+.+........
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~--gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhc--cCceEEEecccccHH
Confidence            345789999999999999999999999  999999888654433

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.61  E-value=0.052  Score=41.93  Aligned_cols=37  Identities=22%  Similarity=0.205  Sum_probs=33.0

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .+.++|+|+|| |..|-..+..|.++  ||+|+++.+.+.
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~--G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAAR--GHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTT--TCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhh--ccceEEEeccCc
Confidence            34689999996 99999999999999  999999999753

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.43  E-value=0.045  Score=46.33  Aligned_cols=34  Identities=21%  Similarity=0.430  Sum_probs=31.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      +|+|+|+|| |.-|-.+|..|.++  |++|.++.++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~--G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEK--GHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhC--CCCEEEEECCC
Confidence            578999996 99999999999999  99999999875

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.43  E-value=0.035  Score=41.57  Aligned_cols=37  Identities=24%  Similarity=0.370  Sum_probs=31.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      +++|.|.|+||-||....+.+.+.+..++|++++-..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            4789999999999999999998765478999887654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.38  E-value=0.037  Score=45.34  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=29.2

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      |+|+|| |.+|..++.+|.++  |++|+++.|.+
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~--G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKE--NKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence            999996 99999999999999  99999999864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.30  E-value=0.051  Score=49.51  Aligned_cols=98  Identities=10%  Similarity=0.037  Sum_probs=60.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCchh--------------------------hhcCCC--CcEEE
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEESK--------------------------QKIGGA--DDLFI  132 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~~~--------------------------~~l~~~--~~~v~  132 (331)
                      ..+|+|.|+ |.+|..+++.|+..  |. ++++++.+.-..                          .++.+.  +.++.
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~--GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~  101 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLP--GIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVE  101 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTT--TCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEES
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHh--cCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEc
Confidence            568999997 88999999999998  75 577776532111                          112222  23333


Q ss_pred             ccCCCc-ccHHHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEcc
Q 046297          133 GDIRDS-NSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGS  211 (331)
Q Consensus       133 ~Dl~d~-~~~~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS  211 (331)
                      .++.+. +.-.+.+.++|+||.+..                              +......+-+.|+++++ .||...+
T Consensus       102 ~~~~~~~~~~~~~~~~~dvVv~~~~------------------------------~~~~~~~l~~~c~~~~i-p~i~~~~  150 (529)
T d1yova1         102 ESPENLLDNDPSFFCRFTVVVATQL------------------------------PESTSLRLADVLWNSQI-PLLICRT  150 (529)
T ss_dssp             SCHHHHHHSCGGGGGGCSEEEEESC------------------------------CHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred             CCchhhhhhHHHHhcCCCEEEECCC------------------------------CHHHHHHHHHHHHHcCC-CEEEEec
Confidence            332110 001134567899987743                              45556678889999887 5776666


Q ss_pred             CC
Q 046297          212 MG  213 (331)
Q Consensus       212 ~~  213 (331)
                      .|
T Consensus       151 ~G  152 (529)
T d1yova1         151 YG  152 (529)
T ss_dssp             ET
T ss_pred             cC
Confidence            54

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.24  E-value=0.077  Score=40.81  Aligned_cols=109  Identities=14%  Similarity=0.134  Sum_probs=60.1

Q ss_pred             CCCCeEEEECCCChhHHHH-HHHHHhcCCCCeEEE-EecCCchhhhcCCC--CcEEEccCCCcccHHHHhc--CCCEEEE
Q 046297           80 MAKSTVLVTGAGGRTGQIV-YKKLKERSEQYAARG-LVRTEESKQKIGGA--DDLFIGDIRDSNSIIPAIQ--GIDALII  153 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l-~~~Ll~~~~g~~V~~-l~R~~~~~~~l~~~--~~~v~~Dl~d~~~~~~~l~--~~d~Vi~  153 (331)
                      |.+.+|.|+| .|.+|+.+ +..+.+.....++++ +++++++.+.+...  ...+.      ++++++++  ++|+|+.
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~ell~~~~id~v~I   73 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELLESGLVDAVDL   73 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHHHSSCCSEEEE
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeeccccccccceeec
Confidence            3456899999 59999864 666665422457774 56766665544321  22222      33556665  6899987


Q ss_pred             cccCCCCCCCCCCCCCCCCCcccccc-----CCCcceehHHHHHHHHHHHHHcCCC
Q 046297          154 LTSAVPKMKPDFDPAKGGRPEFYFEE-----GAYPEQVDWIGQKNQIDAAKAAGAK  204 (331)
Q Consensus       154 ~ag~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~nv~~~~~ll~aa~~~~vk  204 (331)
                      +.......         +--....+.     -+++...|......+++.++++++.
T Consensus        74 ~tp~~~h~---------~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~  120 (181)
T d1zh8a1          74 TLPVELNL---------PFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKT  120 (181)
T ss_dssp             CCCGGGHH---------HHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred             cccccccc---------cccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence            65321000         000000000     1444566777778888888887753

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.06  E-value=0.046  Score=43.72  Aligned_cols=113  Identities=17%  Similarity=0.122  Sum_probs=60.3

Q ss_pred             CCeEEEECCCChhHH-HHHHHHHhcCCCCeEE-EEecCCchhhhcCCC--CcEE-EccCCCcccHHHHhc--CCCEEEEc
Q 046297           82 KSTVLVTGAGGRTGQ-IVYKKLKERSEQYAAR-GLVRTEESKQKIGGA--DDLF-IGDIRDSNSIIPAIQ--GIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtGatG~iG~-~l~~~Ll~~~~g~~V~-~l~R~~~~~~~l~~~--~~~v-~~Dl~d~~~~~~~l~--~~d~Vi~~  154 (331)
                      .-+|.|+|+ |.+|+ +++..+... ++.+|+ +++|++++.+.+.+.  +... ....   ++++++++  ++|+|+.+
T Consensus        33 ~iriaiIG~-G~~~~~~~~~~~~~~-~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~---~d~~ell~~~~iD~V~I~  107 (221)
T d1h6da1          33 RFGYAIVGL-GKYALNQILPGFAGC-QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDY---SNFDKIAKDPKIDAVYII  107 (221)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHTTTC-SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECS---SSGGGGGGCTTCCEEEEC
T ss_pred             CEEEEEEcC-cHHHHHHHHHHHHhC-CCceEEEEecCCHHHHHHHHHhhcccccccccc---Cchhhhcccccceeeeec
Confidence            347999995 89996 566666554 378888 567777665543221  1100 0112   23445554  68999876


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCC
Q 046297          155 TSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGA  203 (331)
Q Consensus       155 ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v  203 (331)
                      ............-... .-...   -+++...+......|++.++++++
T Consensus       108 tp~~~H~~~~~~al~~-gk~v~---~EKPla~~~~e~~~l~~~a~~~~~  152 (221)
T d1h6da1         108 LPNSLHAEFAIRAFKA-GKHVM---CEKPMATSVADCQRMIDAAKAANK  152 (221)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEE---ECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred             cchhhhhhHHHHhhhc-chhhh---cCCCccCCHHHHHHHHHHHHhcCC
Confidence            6431100000000000 00000   144556788888899999988876

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.96  E-value=0.23  Score=39.05  Aligned_cols=102  Identities=20%  Similarity=0.233  Sum_probs=66.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcC-CCCeEEEEecCCchhhhcCCCCcEEEccC-------------------CCcccH
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERS-EQYAARGLVRTEESKQKIGGADDLFIGDI-------------------RDSNSI  141 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~-~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl-------------------~d~~~~  141 (331)
                      ..+|.|+|- |.-|..++.+|.+.+ .+.+.+++.-+...+........+..+.-                   .+.+.+
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~I   93 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEI   93 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHHHHHHHH
Confidence            467999985 889999999999982 13355566655544544332222222211                   134578


Q ss_pred             HHHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          142 IPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       142 ~~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      .+.++++|.||-+||..+..                         -.-+..-+.+.+++.++.-+-++
T Consensus        94 ~~~l~~~d~vfi~AGlGGGT-------------------------Gsgaapvia~~ake~g~lvv~iv  136 (209)
T d2vapa1          94 KAAIQDSDMVFITCGLGGGT-------------------------GTGSAPVVAEISKKIGALTVAVV  136 (209)
T ss_dssp             HHHHTTCSEEEEEEETTSSH-------------------------HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHhccCCCEEEEEEeCCCCc-------------------------cccHHHHHHHHHHHcCCcEEEEE
Confidence            88889999999999986653                         23445667888888886444333

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=92.81  E-value=0.3  Score=37.90  Aligned_cols=98  Identities=13%  Similarity=0.084  Sum_probs=64.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCC-CCeEEEEecCCchhhhcCCCCcEEEcc-----------C--------CCcccHH
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSE-QYAARGLVRTEESKQKIGGADDLFIGD-----------I--------RDSNSII  142 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~-g~~V~~l~R~~~~~~~l~~~~~~v~~D-----------l--------~d~~~~~  142 (331)
                      +||.|+|- |.-|..++.+|.+... +.+.+++.-+...++..+....+..+.           .        .+.+.+.
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I~   79 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKIR   79 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHHHH
Confidence            36888885 8899999999998721 345566665555454433322222221           1        1456788


Q ss_pred             HHhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeE
Q 046297          143 PAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQI  206 (331)
Q Consensus       143 ~~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~  206 (331)
                      +.++++|.||-+||..+..                         -.-++.-+.+.|++.++--+
T Consensus        80 ~~l~~~d~vfi~AGlGGgT-------------------------GtgaapviA~~ake~g~lvv  118 (194)
T d1w5fa1          80 EVLQDTHMVFITAGFGGGT-------------------------GTGASPVIAKIAKEMGILTV  118 (194)
T ss_dssp             HHTTTCSEEEEEEETTSSH-------------------------HHHHHHHHHHHHHHTTCEEE
T ss_pred             HHhcCCCeEEEEEecCCCc-------------------------ccchHHHHHHHHHHcCCceE
Confidence            8888999999999986653                         34446678888999886433

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.79  E-value=0.055  Score=44.42  Aligned_cols=34  Identities=26%  Similarity=0.216  Sum_probs=30.8

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      .|||+|+|| |.-|-..+.+|.++  |++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~--G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIH--GLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTT--SCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence            378999996 99999999999999  99999998764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.59  E-value=0.067  Score=44.62  Aligned_cols=36  Identities=22%  Similarity=0.183  Sum_probs=32.2

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      .+.++|+|+|| |..|-..+..|.++  |++|+++.+++
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~--G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGA--GHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence            34678999996 99999999999999  99999999865

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.35  E-value=0.056  Score=44.28  Aligned_cols=33  Identities=30%  Similarity=0.324  Sum_probs=30.3

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      |+|+|+|| |.-|-..+..|.++  |++|+++-+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~--G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSR--GTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTT--TCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhC--CCCEEEEecCC
Confidence            57999997 99999999999999  99999998864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.05  E-value=0.1  Score=41.76  Aligned_cols=37  Identities=30%  Similarity=0.397  Sum_probs=32.9

Q ss_pred             CCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           80 MAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        80 ~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      ...++|+|+|| |..|-..+..|.++  |++|+++.++++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~--G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMES--GYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHh--ccceeeEeeccc
Confidence            34789999997 99999999999999  999999998653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.95  E-value=0.096  Score=44.33  Aligned_cols=37  Identities=19%  Similarity=0.213  Sum_probs=31.7

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      +|+|+|+|| |.-|-.++..|++++.+++|+++-|+..
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            578999997 9999999999998843579999999853

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.78  E-value=0.089  Score=42.22  Aligned_cols=70  Identities=16%  Similarity=0.076  Sum_probs=48.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHh-cCCCEEEEcccC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAI-QGIDALIILTSA  157 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l-~~~d~Vi~~ag~  157 (331)
                      +..+++|+|-| -|.+|+++++.|.+.  |.+|++.+.+....+.+.....   .+..+++   +++ ..||+++-||..
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~--Gakvv~~d~~~~~~~~~~~~~g---~~~~~~~---~~~~~~cDIl~PcA~~  106 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEEG---ADAVAPN---AIYGVTCDIFAPCALG  106 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHC---CEECCGG---GTTTCCCSEEEECSCS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEeecccHHHHHHHHHhcC---CcccCCc---ccccccccEecccccc
Confidence            34578999998 599999999999999  9999999887765544321100   1111222   233 379999999964

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.51  E-value=1  Score=33.78  Aligned_cols=74  Identities=15%  Similarity=0.052  Sum_probs=43.3

Q ss_pred             CCeEEEECC-CChhHHHHHHHHHhcCC--CCeEEEEecCCch--hhhcC---------CCCcEEEccCCCcccHHHHhcC
Q 046297           82 KSTVLVTGA-GGRTGQIVYKKLKERSE--QYAARGLVRTEES--KQKIG---------GADDLFIGDIRDSNSIIPAIQG  147 (331)
Q Consensus        82 ~~~VlVtGa-tG~iG~~l~~~Ll~~~~--g~~V~~l~R~~~~--~~~l~---------~~~~~v~~Dl~d~~~~~~~l~~  147 (331)
                      ++||.|+|| +.+.+..++..++....  .-+++.++.++++  .+.+.         .+..+-.   ....+..+++++
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~---~~~td~~~al~g   77 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI---HLTLDRRRALDG   77 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE---EEESCHHHHHTT
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee---eecCCchhhcCC
Confidence            368999997 33445555555554311  2478888887643  22211         1111111   123445678899


Q ss_pred             CCEEEEcccCC
Q 046297          148 IDALIILTSAV  158 (331)
Q Consensus       148 ~d~Vi~~ag~~  158 (331)
                      +|+||..++..
T Consensus        78 aDvVv~ta~~~   88 (169)
T d1s6ya1          78 ADFVTTQFRVG   88 (169)
T ss_dssp             CSEEEECCCTT
T ss_pred             CCEEEEccccC
Confidence            99999999864

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.24  E-value=0.099  Score=39.74  Aligned_cols=34  Identities=18%  Similarity=0.262  Sum_probs=28.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      +++|+|+|| |++|-.++..|.+.  |++|.++.+.+
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~--g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRAS--GWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHT--TCCSEEEEECS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHc--CCceEEEEecC
Confidence            568999996 99999999999999  88777665544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.19  E-value=0.087  Score=43.40  Aligned_cols=34  Identities=24%  Similarity=0.296  Sum_probs=31.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .+|+|+|| |-.|..++..|.+.  |++|+++.|.++
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~--G~~v~vlE~~~~   36 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKA--GIDNVILERQTP   36 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHH--TCCEEEECSSCH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence            36999997 89999999999999  999999999864

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.94  E-value=0.1  Score=43.23  Aligned_cols=32  Identities=22%  Similarity=0.334  Sum_probs=28.7

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE  118 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~  118 (331)
                      +|+|+|| |.+|..++.+|.++  |+ +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~--G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTR--GWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHT--TCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHc--CCCcEEEEeCCC
Confidence            5999997 99999999999999  85 699999874

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.92  E-value=0.053  Score=41.36  Aligned_cols=70  Identities=13%  Similarity=0.146  Sum_probs=44.9

Q ss_pred             CCeEEEECCCChhHH-HHHHHHHhcCCC---CeEEEEecCCchhhhc-----------CCCCcEEEccCCCcccHHHHhc
Q 046297           82 KSTVLVTGAGGRTGQ-IVYKKLKERSEQ---YAARGLVRTEESKQKI-----------GGADDLFIGDIRDSNSIIPAIQ  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~-~l~~~Ll~~~~g---~~V~~l~R~~~~~~~l-----------~~~~~~v~~Dl~d~~~~~~~l~  146 (331)
                      ..||.|.||.+ +|. .++..|+.+.+.   .++++++.++++++..           .....+..     ..+..++++
T Consensus         3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFT   76 (167)
T ss_dssp             CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHS
T ss_pred             CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccC
Confidence            35799999844 554 455566554222   4899999988775421           11122222     234778899


Q ss_pred             CCCEEEEcccC
Q 046297          147 GIDALIILTSA  157 (331)
Q Consensus       147 ~~d~Vi~~ag~  157 (331)
                      ++|+||..+|.
T Consensus        77 ~AD~Vvitag~   87 (167)
T d1u8xx1          77 DVDFVMAHIRV   87 (167)
T ss_dssp             SCSEEEECCCT
T ss_pred             CCCEEEECCCc
Confidence            99999999986

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.71  E-value=0.11  Score=42.48  Aligned_cols=31  Identities=23%  Similarity=0.231  Sum_probs=28.8

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      |+|+|| |.+|..++.+|.++  |++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~--G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQ--GVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHT--TCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence            899996 99999999999999  99999999864

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.50  E-value=0.12  Score=43.13  Aligned_cols=33  Identities=15%  Similarity=0.258  Sum_probs=29.9

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      ..|+|+|| |..|..+|+.|.+.  |++|.++.+++
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~--g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKL--NKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGG--TCCEEEECSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhC--CCcEEEEECCC
Confidence            46899996 99999999999999  99999999865

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.26  E-value=0.061  Score=40.76  Aligned_cols=69  Identities=16%  Similarity=0.082  Sum_probs=43.7

Q ss_pred             CeEEEECCCChhHHHHH-HHHHhc---CCCCeEEEEecCCchhhhc--------CCCCcEEEccCCCcccHHHHhcCCCE
Q 046297           83 STVLVTGAGGRTGQIVY-KKLKER---SEQYAARGLVRTEESKQKI--------GGADDLFIGDIRDSNSIIPAIQGIDA  150 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~-~~Ll~~---~~g~~V~~l~R~~~~~~~l--------~~~~~~v~~Dl~d~~~~~~~l~~~d~  150 (331)
                      |||.|.|| |.+|..++ ..|++.   .+..++++++.++++....        .....+..     ..+..+.++++|+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-----t~~~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-----SDTFEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-----CSSHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-----ecCcccccCCCCE
Confidence            68999998 54665555 333332   1246899999988765431        11222222     1234578899999


Q ss_pred             EEEcccC
Q 046297          151 LIILTSA  157 (331)
Q Consensus       151 Vi~~ag~  157 (331)
                      ||..++.
T Consensus        75 VVita~~   81 (162)
T d1up7a1          75 VIFQFRP   81 (162)
T ss_dssp             EEECCCT
T ss_pred             EEEeccc
Confidence            9999986

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.25  E-value=0.092  Score=40.15  Aligned_cols=32  Identities=28%  Similarity=0.323  Sum_probs=25.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR  116 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R  116 (331)
                      +.+|+|+|| |++|-.++..|.+.  |++|.++.+
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~--g~~v~i~~~   34 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQA--GYQGLITVV   34 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHH--TCCSCEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhc--CCceEEEEE
Confidence            356999996 99999999999999  776555544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.11  E-value=0.14  Score=40.34  Aligned_cols=31  Identities=23%  Similarity=0.216  Sum_probs=28.8

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      |+|+|| |..|-..|..|.++  |++|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~--G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVD--GKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHC--CCCEEEEcCCC
Confidence            899995 99999999999999  99999999975

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.92  E-value=0.03  Score=44.79  Aligned_cols=26  Identities=31%  Similarity=0.316  Sum_probs=23.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeE
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAA  111 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V  111 (331)
                      |||+|+|| |.+|-..+.+|+++  |++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~--G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHER--YHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--HTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHC--CCCc
Confidence            67999997 99999999999999  8754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.79  E-value=0.13  Score=42.69  Aligned_cols=36  Identities=17%  Similarity=0.177  Sum_probs=30.9

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT  117 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~  117 (331)
                      +..+++|+|-|- |.+|+++++.|.+.  |.+|++++-.
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~--Gakvv~vsD~   68 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRF--GAKCVAVGES   68 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEEET
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEEcc
Confidence            345788999984 99999999999999  9999988753

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.77  E-value=0.2  Score=35.36  Aligned_cols=37  Identities=16%  Similarity=0.041  Sum_probs=28.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcC-CCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERS-EQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~-~g~~V~~l~R~~~  119 (331)
                      .++++|.|| |++|-.++..|.+.+ .+.+|+++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            468999997 999999997665531 1668999998754

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=89.62  E-value=0.015  Score=43.59  Aligned_cols=62  Identities=11%  Similarity=0.077  Sum_probs=36.5

Q ss_pred             EEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhcCCCEEEEccc
Q 046297           86 LVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQGIDALIILTS  156 (331)
Q Consensus        86 lVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~ag  156 (331)
                      -++| +|.+|+++++.|.+.  ++.+.+..|++++.+.+.+.......+      ..++++.+|+|+-+.-
T Consensus         3 gfIG-~G~mg~~l~~~L~~~--~~~~~v~~R~~~~~~~l~~~~~~~~~~------~~~~~~~~DiVil~v~   64 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDR--YEIGYILSRSIDRARNLAEVYGGKAAT------LEKHPELNGVVFVIVP   64 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC------CCCEECSSHHHHHHHHHHTCCCCCS------SCCCCC---CEEECSC
T ss_pred             EEEe-CcHHHHHHHHHHHhC--CCEEEEEeCChhhhcchhhcccccccc------hhhhhccCcEEEEecc
Confidence            3555 699999999977655  555568899988877764432211122      2245678899998763

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.60  E-value=0.21  Score=41.34  Aligned_cols=34  Identities=18%  Similarity=0.295  Sum_probs=30.3

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      ..||+|+|| |.-|-..+.+|.++  |++|+++-++.
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~--G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSF--GMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence            467999996 99999999999999  99999997754

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.58  E-value=0.21  Score=37.75  Aligned_cols=106  Identities=17%  Similarity=0.205  Sum_probs=54.8

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCC
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAV  158 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~  158 (331)
                      .+.+|.|+|. |.+|+..++.|.+......+.+++....+......  .+..      .++.++++  ++|+|+.+....
T Consensus         6 ~k~kv~iIG~-G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~e~l~~~~iD~V~I~tp~~   76 (172)
T d1lc0a1           6 GKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLD--EVRQ------ISLEDALRSQEIDVAYICSESS   76 (172)
T ss_dssp             CSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEET--TEEB------CCHHHHHHCSSEEEEEECSCGG
T ss_pred             CCcEEEEEcC-CHHHHHHHHHHHhCCCCcEEEEEeccchHHHHHhh--ccCc------CCHHHHHhCCCcchhhhccccc
Confidence            3568999995 99999988888764211223333332221111111  1111      13555664  678887665321


Q ss_pred             CCCCCCCCCCCCCCCcccccc-----CCCcceehHHHHHHHHHHHHHcCCC
Q 046297          159 PKMKPDFDPAKGGRPEFYFEE-----GAYPEQVDWIGQKNQIDAAKAAGAK  204 (331)
Q Consensus       159 ~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~nv~~~~~ll~aa~~~~vk  204 (331)
                      ...         .--....+.     -+++...|+.....+++.+++.|+.
T Consensus        77 ~H~---------~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~  118 (172)
T d1lc0a1          77 SHE---------DYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV  118 (172)
T ss_dssp             GHH---------HHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred             ccc---------cccccccccchhhhcCCCccccHHHHHHHHHHHHHcCCe
Confidence            000         000000000     1444566888888899999888763

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.43  E-value=0.25  Score=35.89  Aligned_cols=37  Identities=14%  Similarity=0.142  Sum_probs=29.5

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhc--CCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKER--SEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~--~~g~~V~~l~R~~~  119 (331)
                      .++++|.|| |++|-.++..|.+.  ..|.+|+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            568999997 99999999988631  12899999998754

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.41  E-value=0.19  Score=37.43  Aligned_cols=31  Identities=23%  Similarity=0.398  Sum_probs=26.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      ||+|+|| |++|-.++..|. +  +++|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~--~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-Q--TYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-T--TSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-c--CCCEEEEeccc
Confidence            6899997 999999999885 5  67999998754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.32  E-value=0.18  Score=40.05  Aligned_cols=33  Identities=33%  Similarity=0.363  Sum_probs=29.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTE  118 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~  118 (331)
                      ++|+|+|| |..|-..+..|.++  |+ +|+++-+++
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~--G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEA--GITDLLILEATD   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHT--TCCCEEEECSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhC--CCCcEEEEECCC
Confidence            36999997 99999999999999  96 699998864

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.79  E-value=0.84  Score=35.30  Aligned_cols=99  Identities=16%  Similarity=0.142  Sum_probs=62.9

Q ss_pred             EEEECCCChhHHHHHHHHHhcCC-CCeEEEEecCCchhhhcCCCCcEEEc-----------cC--------CCcccHHHH
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSE-QYAARGLVRTEESKQKIGGADDLFIG-----------DI--------RDSNSIIPA  144 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~-g~~V~~l~R~~~~~~~l~~~~~~v~~-----------Dl--------~d~~~~~~~  144 (331)
                      |-|+| -|.-|..++.++.+... +.+.+++.-+...+........+..+           |.        .+.+.+.++
T Consensus         4 IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I~~~   82 (198)
T d1rq2a1           4 IKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEIEEL   82 (198)
T ss_dssp             EEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHHHHH
T ss_pred             EEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchHHHHhcCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHHHHH
Confidence            55666 47779999999998831 34555565554444433322222222           11        256678888


Q ss_pred             hcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEE
Q 046297          145 IQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLV  209 (331)
Q Consensus       145 l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~  209 (331)
                      +++.|.||-.||..+..                         -.-++.-+.+.|++.|+-.+-++
T Consensus        83 l~~~d~vfi~AGlGGgT-------------------------GtGaaPviA~iake~g~l~v~iv  122 (198)
T d1rq2a1          83 LRGADMVFVTAGEGGGT-------------------------GTGGAPVVASIARKLGALTVGVV  122 (198)
T ss_dssp             HTTCSEEEEEEETTSSH-------------------------HHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             hcCCCEEEEEEecCCCC-------------------------CcchHHHHHHHHHHcCCcEEEEE
Confidence            89999999999986653                         33445668888999886444333

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=88.74  E-value=0.26  Score=34.56  Aligned_cols=37  Identities=11%  Similarity=0.002  Sum_probs=28.9

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhc-CCCCeEEEEecCCc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R~~~  119 (331)
                      .++++|+|| |++|-.++..|.+. ..|.+|+++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            468999997 99999999765542 11889999999754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.66  E-value=0.29  Score=36.24  Aligned_cols=36  Identities=8%  Similarity=-0.070  Sum_probs=29.8

Q ss_pred             CCeEEEE-CCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           82 KSTVLVT-GAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        82 ~~~VlVt-GatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      .+.++|. .+.|+||-.++..|.+.  |++|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~--G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATA--GHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHT--TCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCc
Confidence            4556665 35699999999999999  999999999753

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.66  E-value=0.28  Score=39.54  Aligned_cols=34  Identities=24%  Similarity=0.256  Sum_probs=29.8

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCC-eEEEEecCCc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQY-AARGLVRTEE  119 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~-~V~~l~R~~~  119 (331)
                      ++|+|+|| |..|..++..|.+.  |. .|+++-|++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~--Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQA--GIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhC--CCCeEEEEeCCCC
Confidence            57999997 99999999999999  94 8989988754

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.35  E-value=0.28  Score=38.67  Aligned_cols=36  Identities=14%  Similarity=0.152  Sum_probs=31.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      ++|+|+|| |--|-..+..|.++..|++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            57999996 9999999999988755899999988753

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.34  E-value=0.98  Score=34.89  Aligned_cols=97  Identities=18%  Similarity=0.171  Sum_probs=63.4

Q ss_pred             eEEEECCCChhHHHHHHHHHhcC-CCCeEEEEecCCchhhhcCCCCcEEEc-----------cC--------CCcccHHH
Q 046297           84 TVLVTGAGGRTGQIVYKKLKERS-EQYAARGLVRTEESKQKIGGADDLFIG-----------DI--------RDSNSIIP  143 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~~-~g~~V~~l~R~~~~~~~l~~~~~~v~~-----------Dl--------~d~~~~~~  143 (331)
                      +|.|.| -|.-|..++.+|.+.+ .+.+.+++.-+...++.......+..+           |.        .+.+.+.+
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~~   81 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISE   81 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            366777 4888999999999883 134666666665555433222222211           11        14566888


Q ss_pred             HhcCCCEEEEcccCCCCCCCCCCCCCCCCCccccccCCCcceehHHHHHHHHHHHHHcCCCeE
Q 046297          144 AIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQI  206 (331)
Q Consensus       144 ~l~~~d~Vi~~ag~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~  206 (331)
                      .++++|.||-+||..+..                         -.-++.-+.+.|++.++--+
T Consensus        82 ~l~~~d~vfi~AGlGGGT-------------------------GtgaapviA~~ake~g~lvv  119 (198)
T d1ofua1          82 VLEGADMVFITTGMGGGT-------------------------GTGAAPIIAEVAKEMGILTV  119 (198)
T ss_dssp             HHTTCSEEEEEEETTSSH-------------------------HHHHHHHHHHHHHHTTCEEE
T ss_pred             HhCCCCeEEEEecCCCCc-------------------------cccHHHHHHHHHHHcCCCEE
Confidence            889999999999986653                         23445668888999886333

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.08  E-value=0.78  Score=35.60  Aligned_cols=70  Identities=9%  Similarity=0.146  Sum_probs=44.1

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchh---------hhc--CCCCcEEE-ccCCCcccHHHHhc--CC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESK---------QKI--GGADDLFI-GDIRDSNSIIPAIQ--GI  148 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~---------~~l--~~~~~~v~-~Dl~d~~~~~~~l~--~~  148 (331)
                      |||+|.|. +..|..+.+.|+++  |++|.++.-.+++.         .++  ..++.++. .|+.+++ +.+.++  ++
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~--g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~-~~~~i~~~~~   76 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAA--GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPL-WVERIAQLSP   76 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHT--TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHH-HHHHHHHTCC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHC--CCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchh-hhhhhhhhcc
Confidence            67888864 66899999999999  99997665322211         111  12355554 4555555 444444  78


Q ss_pred             CEEEEccc
Q 046297          149 DALIILTS  156 (331)
Q Consensus       149 d~Vi~~ag  156 (331)
                      |+++....
T Consensus        77 Dlii~~g~   84 (203)
T d2blna2          77 DVIFSFYY   84 (203)
T ss_dssp             SEEEEESC
T ss_pred             cceeeeec
Confidence            98887753

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=86.61  E-value=1.2  Score=34.44  Aligned_cols=72  Identities=8%  Similarity=0.053  Sum_probs=47.0

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhh----h----------cCCCCcEEEccCCCcccHHHHhc-
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQ----K----------IGGADDLFIGDIRDSNSIIPAIQ-  146 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~----~----------l~~~~~~v~~Dl~d~~~~~~~l~-  146 (331)
                      .|||++.| ++..+..+.+.|++.  |++|.++.-.+++..    .          ...++.+...+..+.+...+.++ 
T Consensus         3 ~mKI~f~G-~~~~~~~~L~~L~~~--~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (206)
T d1fmta2           3 SLRIIFAG-TPDFAARHLDALLSS--GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAE   79 (206)
T ss_dssp             CCEEEEEE-CSHHHHHHHHHHHHT--TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHH
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHhC--CCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhh
Confidence            57899997 578899999999999  999876553322111    0          11235566555555565666665 


Q ss_pred             -CCCEEEEccc
Q 046297          147 -GIDALIILTS  156 (331)
Q Consensus       147 -~~d~Vi~~ag  156 (331)
                       ++|+++....
T Consensus        80 ~~~d~~v~~~~   90 (206)
T d1fmta2          80 LQADVMVVVAY   90 (206)
T ss_dssp             TTCSEEEEESC
T ss_pred             hcceEEEeecc
Confidence             6788776654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.98  E-value=0.4  Score=37.55  Aligned_cols=71  Identities=13%  Similarity=0.073  Sum_probs=53.0

Q ss_pred             CCeEEEEC-CCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           82 KSTVLVTG-AGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        82 ~~~VlVtG-atG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      +.+||=.| |+|..-.++++.. ..  | +|++++-+++..+.+      .+++.++..|..++......+..+|+|+|.
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v-~~--g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~  132 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIV-DE--G-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD  132 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHT-TT--S-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred             CCEEEEeCCcCCHHHHHHHHhc-cC--C-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEec
Confidence            57899888 6777777777643 44  5 899999988655432      346889999999988777667778888876


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      ..
T Consensus       133 ~~  134 (209)
T d1nt2a_         133 IA  134 (209)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.77  E-value=0.4  Score=39.81  Aligned_cols=34  Identities=26%  Similarity=0.351  Sum_probs=30.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      ..|+|+|| |..|-..+.+|.++  |.+|+++.+.++
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~--G~~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLREL--GRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhC--CCCEEEEEcCCC
Confidence            35999997 99999999999999  999999998754

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.69  E-value=1.5  Score=34.71  Aligned_cols=72  Identities=13%  Similarity=0.136  Sum_probs=51.3

Q ss_pred             CCCeEEEEC-CCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc------CCCCcEEEccCCCcccHHHHhcCCCEEEE
Q 046297           81 AKSTVLVTG-AGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI------GGADDLFIGDIRDSNSIIPAIQGIDALII  153 (331)
Q Consensus        81 ~~~~VlVtG-atG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l------~~~~~~v~~Dl~d~~~~~~~l~~~d~Vi~  153 (331)
                      .+.+||=.| |+|..-+++++. ..   +-+|++++.++...+.+      .+++..+.+|..++.........+|++++
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~---~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~  149 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-AD---KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE  149 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TT---TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CC---CCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeec
Confidence            367899888 788888888874 32   45899999998654432      23477888999888876655555666666


Q ss_pred             ccc
Q 046297          154 LTS  156 (331)
Q Consensus       154 ~ag  156 (331)
                      ...
T Consensus       150 ~~~  152 (230)
T d1g8sa_         150 DVA  152 (230)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.65  E-value=0.69  Score=38.15  Aligned_cols=28  Identities=21%  Similarity=0.226  Sum_probs=25.0

Q ss_pred             ECCCChhHHHHHHHHHhcCCCCeEEEEecC
Q 046297           88 TGAGGRTGQIVYKKLKERSEQYAARGLVRT  117 (331)
Q Consensus        88 tGatG~iG~~l~~~Ll~~~~g~~V~~l~R~  117 (331)
                      --.||..|.+|++.|+.+  |++|+.+.+.
T Consensus        42 N~SSGk~G~alA~~~~~~--Ga~V~li~g~   69 (290)
T d1p9oa_          42 NFSSGRRGATSAEAFLAA--GYGVLFLYRA   69 (290)
T ss_dssp             ECCCCHHHHHHHHHHHHT--TCEEEEEEET
T ss_pred             CCCchHHHHHHHHHHHHc--CCEEEEEecC
Confidence            346799999999999999  9999999875

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=85.25  E-value=3.7  Score=30.69  Aligned_cols=33  Identities=18%  Similarity=0.258  Sum_probs=24.4

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcC--CCCeEEEEec
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERS--EQYAARGLVR  116 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~--~g~~V~~l~R  116 (331)
                      +||.|=| =|.||+.+.+.++++.  +..+|+++.-
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd   36 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIND   36 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcC
Confidence            4688888 6999999999999752  2456665553

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.24  E-value=0.62  Score=34.42  Aligned_cols=34  Identities=21%  Similarity=0.114  Sum_probs=28.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCe-EEEEecCC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYA-ARGLVRTE  118 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~-V~~l~R~~  118 (331)
                      .++|+|+|| |.+|--.+..+++.  |.+ |+++.|.+
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~--GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRC--GARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHT--TCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHc--CCcceeEEEeCC
Confidence            567999986 99999999999999  765 77777754

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.14  E-value=0.41  Score=39.74  Aligned_cols=31  Identities=26%  Similarity=0.322  Sum_probs=28.5

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      |+|+|| |..|-..+..|.++  |++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~--G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDS--GLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHT--TCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhC--CCCEEEEecCC
Confidence            789996 99999999999999  99999998764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.44  E-value=0.49  Score=32.55  Aligned_cols=37  Identities=14%  Similarity=0.064  Sum_probs=30.0

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      .-.+|+|+|.|+ |.-|.-++..|.+.  ..+|+.+.|+.
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~--ak~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPV--AKHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTT--SCSSEEEECTT
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHh--cCEEEEEEecC
Confidence            345789999996 89999999999987  67777666654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.25  E-value=0.5  Score=37.48  Aligned_cols=32  Identities=22%  Similarity=0.238  Sum_probs=29.3

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCc
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEE  119 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~  119 (331)
                      |+|+|| |-.|...+..|.++  |++|+++.+++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~--G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEE--GANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHC--CCcEEEEeCCCC
Confidence            899997 99999999999999  999999998753

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=83.97  E-value=2.7  Score=31.34  Aligned_cols=31  Identities=26%  Similarity=0.340  Sum_probs=26.2

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR  116 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R  116 (331)
                      +||.|=| =|.||+.+.+.|.++  +.+|+++.-
T Consensus         1 ikigING-fGRIGR~~~R~l~~~--~i~iv~INd   31 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSR--GVEVALIND   31 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHH--TCCEEEEEC
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcC--CCEEEEECC
Confidence            4678877 599999999999998  898887764

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.54  E-value=0.91  Score=35.22  Aligned_cols=31  Identities=26%  Similarity=0.347  Sum_probs=26.6

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR  116 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R  116 (331)
                      |||++.| ++..|..+.+.|+++  ||+|.++.-
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~--~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKE--GHEVVGVFT   31 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHC--CCcEEEEEc
Confidence            6789997 578899999999999  999987654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=83.32  E-value=0.75  Score=36.84  Aligned_cols=36  Identities=17%  Similarity=0.163  Sum_probs=31.2

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT  117 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~  117 (331)
                      +..+++|+|-| -|.+|+++++.|.+.  |.+|++++-.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~--Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKM--GAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHc--CCeEEEeecc
Confidence            44678999998 699999999999999  9999987753

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=83.09  E-value=0.36  Score=40.96  Aligned_cols=70  Identities=11%  Similarity=0.148  Sum_probs=52.1

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhc----CC--CCcEEEccCCCcccHHHHhcCCCEEEEc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKI----GG--ADDLFIGDIRDSNSIIPAIQGIDALIIL  154 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l----~~--~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~  154 (331)
                      ..+++.|+| +|..+..-++.+.+..+-.+|++.+|++++.+++    ..  ++.+..+     ++++++++++|+|+-+
T Consensus       127 da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~-----~s~~eav~~ADIi~t~  200 (340)
T d1x7da_         127 NARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA-----SSVAEAVKGVDIITTV  200 (340)
T ss_dssp             TCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC-----SSHHHHHTTCSEEEEC
T ss_pred             CCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec-----CCHHHHHhcCCceeec
Confidence            457889999 5999999999888765456899999998765543    22  3444443     4578899999999977


Q ss_pred             cc
Q 046297          155 TS  156 (331)
Q Consensus       155 ag  156 (331)
                      .+
T Consensus       201 Ta  202 (340)
T d1x7da_         201 TA  202 (340)
T ss_dssp             CC
T ss_pred             cc
Confidence            65

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.88  E-value=0.73  Score=35.90  Aligned_cols=35  Identities=11%  Similarity=0.162  Sum_probs=28.0

Q ss_pred             CeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCC
Q 046297           83 STVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTE  118 (331)
Q Consensus        83 ~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~  118 (331)
                      ..++|+|| |++|-.++..|.+.++..+|+++++.+
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            35788886 999999999999984445688888743

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=82.35  E-value=0.58  Score=39.54  Aligned_cols=30  Identities=20%  Similarity=0.141  Sum_probs=27.9

Q ss_pred             EEEECCCChhHHHHHHHHHhcCCCCeEEEEecC
Q 046297           85 VLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT  117 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~  117 (331)
                      |+|+| +|+-|..++.+|.++  |++|.++-|.
T Consensus         5 VIVVG-sG~aG~v~A~rLaea--G~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEA--GVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHC--cCeEEEEecC
Confidence            88998 599999999999999  9999999985

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.34  E-value=0.5  Score=39.67  Aligned_cols=68  Identities=13%  Similarity=0.079  Sum_probs=48.2

Q ss_pred             CCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCC-----CCcEEEccCCCcccHHHHhcCCCEEEEcc
Q 046297           81 AKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGG-----ADDLFIGDIRDSNSIIPAIQGIDALIILT  155 (331)
Q Consensus        81 ~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~-----~~~~v~~Dl~d~~~~~~~l~~~d~Vi~~a  155 (331)
                      ..+++.|+| +|..+++.++.|+...+-.+|++.+|++++.+.+..     .+....       +..+++.++|+|+.+.
T Consensus       124 ~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~-------~~~~a~~~aDiV~taT  195 (320)
T d1omoa_         124 NSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASV-------QPAEEASRCDVLVTTT  195 (320)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEE-------CCHHHHTSSSEEEECC
T ss_pred             CccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCcccc-------chhhhhccccEEEEec
Confidence            456788887 699999999999886556689999999877655422     122221       1235678999998776


Q ss_pred             c
Q 046297          156 S  156 (331)
Q Consensus       156 g  156 (331)
                      .
T Consensus       196 ~  196 (320)
T d1omoa_         196 P  196 (320)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.24  E-value=3.1  Score=30.58  Aligned_cols=76  Identities=12%  Similarity=0.081  Sum_probs=55.4

Q ss_pred             hhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEcccCCCCCCCCCCCCCC
Q 046297           93 RTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTSAVPKMKPDFDPAKG  170 (331)
Q Consensus        93 ~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag~~~~~~~~~~~~~~  170 (331)
                      -||..++..+++.. ||+|+-+..+-.                  ++++.+++.  ++|+|.-.+-.             
T Consensus        20 diG~~iv~~~l~~~-G~~Vi~LG~~~p------------------~e~~~~~~~~~~~d~i~lS~l~-------------   67 (156)
T d3bula2          20 DIGKNIVGVVLQCN-NYEIVDLGVMVP------------------AEKILRTAKEVNADLIGLSGLI-------------   67 (156)
T ss_dssp             CHHHHHHHHHHHTT-TCEEEECCSSBC------------------HHHHHHHHHHHTCSEEEEECCS-------------
T ss_pred             hHHHHHHHHHHHHC-CCEEEECCCCCC------------------HHHHHHHHHhhCCCEEEEeccc-------------
Confidence            58999999999865 999998887643                  333444443  78888766653             


Q ss_pred             CCCccccccCCCcceehHHHHHHHHHHHHHcCCCeEEEEccCCC
Q 046297          171 GRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGG  214 (331)
Q Consensus       171 ~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~vk~~v~~SS~~~  214 (331)
                                    .......+.+++.+++.|.+..|+++....
T Consensus        68 --------------~~~~~~~~~~~~~l~~~g~~~~vivGG~~~   97 (156)
T d3bula2          68 --------------TPSLDEMVNVAKEMERQGFTIPLLIGGATT   97 (156)
T ss_dssp             --------------THHHHHHHHHHHHHHHTTCCSCEEEESTTC
T ss_pred             --------------ccchHHHHHHHHHHHhccccceEEEecccc
Confidence                          335667889999999998876666676543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=80.79  E-value=0.93  Score=36.55  Aligned_cols=35  Identities=29%  Similarity=0.184  Sum_probs=30.6

Q ss_pred             cCCCCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec
Q 046297           79 SMAKSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR  116 (331)
Q Consensus        79 ~~~~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R  116 (331)
                      +...++|+|-| -|.+|+++++.|.+.  |.+|++++-
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~--GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAEL--GAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHH--TCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHc--CCeEEEEec
Confidence            34578999998 699999999999999  999998765

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=80.75  E-value=0.68  Score=38.53  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=28.2

Q ss_pred             EEEECCCChhHHHHHHHHH-----hcCCCCeEEEEecCCc
Q 046297           85 VLVTGAGGRTGQIVYKKLK-----ERSEQYAARGLVRTEE  119 (331)
Q Consensus        85 VlVtGatG~iG~~l~~~Ll-----~~~~g~~V~~l~R~~~  119 (331)
                      |+|+|| |-.|..++..|.     ++  |++|+++.|.+.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~--G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKP--DLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHST--TCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccC--CCcEEEEcCCCC
Confidence            899997 999999999996     45  999999998764

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=80.73  E-value=0.76  Score=36.54  Aligned_cols=117  Identities=9%  Similarity=0.047  Sum_probs=58.6

Q ss_pred             CCCCeEEEECCC---ChhHHHHHHHHHhcCCCCeEEE-EecCCchhhhcCCC--CcEEEccCCCcccHHHHhc--CCCEE
Q 046297           80 MAKSTVLVTGAG---GRTGQIVYKKLKERSEQYAARG-LVRTEESKQKIGGA--DDLFIGDIRDSNSIIPAIQ--GIDAL  151 (331)
Q Consensus        80 ~~~~~VlVtGat---G~iG~~l~~~Ll~~~~g~~V~~-l~R~~~~~~~l~~~--~~~v~~Dl~d~~~~~~~l~--~~d~V  151 (331)
                      ....+|.|+|..   |++++.-...+.+..++.++++ +++++++.+++...  ...    ....+++.++++  ++|+|
T Consensus        14 ~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~iD~V   89 (237)
T d2nvwa1          14 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKH----ATGFDSLESFAQYKDIDMI   89 (237)
T ss_dssp             GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTT----CEEESCHHHHHHCTTCSEE
T ss_pred             CCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhccccc----ceeecchhhccccccccee
Confidence            345789999964   4566666666666444788885 55665554443211  110    001234556664  68888


Q ss_pred             EEcccCCCCCCCC---CCC-CCCCCCccccccCCCcceehHHHHHHHHHHHHHcC
Q 046297          152 IILTSAVPKMKPD---FDP-AKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAG  202 (331)
Q Consensus       152 i~~ag~~~~~~~~---~~~-~~~~~p~~~~~~~~~~~~~nv~~~~~ll~aa~~~~  202 (331)
                      +.+.-........   +.. -...+....+  -+++...|+.....+++++++.+
T Consensus        90 ~i~tp~~~h~~~~~~al~aG~~~~~~k~V~--~EKPla~~~~e~~~l~~~a~~~~  142 (237)
T d2nvwa1          90 VVSVKVPEHYEVVKNILEHSSQNLNLRYLY--VEWALAASVQQAEELYSISQQRA  142 (237)
T ss_dssp             EECSCHHHHHHHHHHHHHHSSSCSSCCEEE--EESSSSSSHHHHHHHHHHHHTCT
T ss_pred             eccCCCcchhhHHHHHHHhcccccCCceEE--EeccccCCHHHHHHHHHHHhhcC
Confidence            8875210000000   000 0000000001  14455667888888888887653

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=80.54  E-value=5.7  Score=27.51  Aligned_cols=34  Identities=18%  Similarity=0.188  Sum_probs=29.1

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecC
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRT  117 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~  117 (331)
                      ..+|+|-|-||..|+.-+++.++-  |-+|++=...
T Consensus         6 ~trVlvQGiTG~~G~~ht~~m~~y--GT~vVaGVtP   39 (119)
T d2nu7a1           6 NTKVICQGFTGSQGTFHSEQAIAY--GTKMVGGVTP   39 (119)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECT
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHh--CCceEEEEcc
Confidence            468999999999999999999998  8888765543

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.48  E-value=5  Score=29.82  Aligned_cols=32  Identities=28%  Similarity=0.510  Sum_probs=24.7

Q ss_pred             eEEEECCCChhHHHHHHHHHhc-CCCCeEEEEec
Q 046297           84 TVLVTGAGGRTGQIVYKKLKER-SEQYAARGLVR  116 (331)
Q Consensus        84 ~VlVtGatG~iG~~l~~~Ll~~-~~g~~V~~l~R  116 (331)
                      ||.|=| =|.||+.+.+.++++ .++.+|+++.-
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd   34 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIND   34 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEecc
Confidence            577877 699999999999975 23567777643

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.47  E-value=3.1  Score=30.53  Aligned_cols=33  Identities=18%  Similarity=0.258  Sum_probs=27.6

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEec
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVR  116 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R  116 (331)
                      +++|.|++.+|+.|.-.+..+.+.  |-++--+.-
T Consensus         3 G~rvaiit~sGG~~~l~aD~~~~~--Gl~l~~l~~   35 (163)
T d2csua3           3 GNKVAIMTNAGGPGVLTADELDKR--GLKLATLEE   35 (163)
T ss_dssp             SSEEEEEESCHHHHHHHHHHHHTT--TCEECCCCH
T ss_pred             CCeEEEEECChHHHHHHHHHHHHc--CCccCCCCH
Confidence            578999999999999999999988  877655543

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=80.40  E-value=7.2  Score=27.07  Aligned_cols=65  Identities=25%  Similarity=0.315  Sum_probs=42.4

Q ss_pred             CCeEEEECCCChhHHHHHHHHHhcCCCCeEEEEecCCchhhhcCCCCcEEEccCCCcccHHHHhc--CCCEEEEccc
Q 046297           82 KSTVLVTGAGGRTGQIVYKKLKERSEQYAARGLVRTEESKQKIGGADDLFIGDIRDSNSIIPAIQ--GIDALIILTS  156 (331)
Q Consensus        82 ~~~VlVtGatG~iG~~l~~~Ll~~~~g~~V~~l~R~~~~~~~l~~~~~~v~~Dl~d~~~~~~~l~--~~d~Vi~~ag  156 (331)
                      ..+|+|-|-||..|+.-+++.++-  |-+|++=+.....-..+.+ +.+       .+++.++++  ++|+=+-...
T Consensus         7 ~trVivQGiTG~~G~~ht~~m~~y--GT~iVaGVtPgkgG~~~~g-iPV-------f~tV~eAv~~~~~d~SvIfVP   73 (121)
T d1oi7a1           7 ETRVLVQGITGREGQFHTKQMLTY--GTKIVAGVTPGKGGMEVLG-VPV-------YDTVKEAVAHHEVDASIIFVP   73 (121)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECTTCTTCEETT-EEE-------ESSHHHHHHHSCCSEEEECCC
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHh--CCceEeeeecCCCCcEEEC-Cch-------HhhHHHHHHhcCCeEEEEeeC
Confidence            457999999999999999999998  8888765554322222211 111       244556554  6776665553