Citrus Sinensis ID: 046348

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccEEEEEEEccccEEEEcccccccEEEccccccccccccccccEEEEccccEEEEEEEcccccccEEEEEEcccccEEEEEEEEEcccccEEEcccccccEEEEEEccccccHHHHHccccccEEEccccccEEEEEEccccccccEEEEEEccEEEEEcccEEEccccEEEEEEEEccccccccccccccccEEEEEEEEcccccEEEEEEccccccccccccccccccccEEEEEEccccccccEEEEEEcccccEEEEEEccccccccccEEEEcccccccccccccEEEEEEEEEccccEEEEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccEEEEEEcccccEEEEEcccccEEEccccccccccccccEcccccccccccEEEEEcccccccEEEEEEEcccccEccccccccccccEEEEcEEEcccEEEEccccEEEcHHHHHcccccEEEEccccccEEEEEEccccccccEEEEEccccEEEEEEEcccccccEEEEEEcccccHHHHHHccHcccccEEEEEEEcccccEEEEEccccccccccccccHcccccEEEEEEEcccccccEEEEEEEcccccEEEEEEcccccccccEEEEccccccccccHccccEEEEEEEEcccccEEEEEEEccccc
Coil and Loop (DISEMBL)
MLSGIYGIADIIQCVAAVARVLMGHINlkkgfglantsLAFFSSKLLalgesdlpyiinstregdvetvgrwDFDEALFAsmtahpktdmttketfafkfspvfsphltffrfdangikqkdvpilsinrptfihdfAITKRFAIFSETQLAVSAANVMlgkgmptvfvpekiprIGIILKYAtsdaemkwfnvpgfnAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTrnlelgsinssyigkknryvfmgvgkeipkmegvvkIDLEKEIEVsrrfygpscfggeplfvprnedhleaadeddgfVVTYIHDEIHEESKFLVMDAKSPI
Flexible Loop (DISEMBL)
MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTregdvetvgRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMptvfvpekipRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFrnilstrnlelgsinssyigkknrYVFMGVgkeipkmegvVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIheeskflvmdakspi
Low Complexity Region (SEG)
MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTslaffsskllalGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI
Disordered region (IsUnstruct)
***GIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLV*******
Disordered Region (DISOPRED)
MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI
Disordered Region (DISEMBL)
MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI
Disordered Region (DISPRO)
*LSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	358	2.2.26 [Sep-21-2011]
O49675	595	Probable carotenoid cleav	yes	no	0.991	0.596	0.526	1e-104
Q84K96	369	Zeaxanthin 7,8(7',8')-cle	N/A	no	0.913	0.886	0.470	2e-87
Q9C6Z1	589	Probable 9-cis-epoxycarot	no	no	0.960	0.584	0.382	2e-67
O49505	583	9-cis-epoxycarotenoid dio	no	no	0.966	0.593	0.374	1e-64
Q9LRM7	577	9-cis-epoxycarotenoid dio	no	no	0.955	0.592	0.353	2e-64
O24592	604	9-cis-epoxycarotenoid dio	N/A	no	0.969	0.574	0.365	1e-62
Q9M9F5	657	9-cis-epoxycarotenoid dio	no	no	0.955	0.520	0.361	1e-61
Q9M6E8	615	9-cis-epoxycarotenoid dio	N/A	no	0.958	0.557	0.354	5e-60
Q9LRR7	599	9-cis-epoxycarotenoid dio	no	no	0.960	0.574	0.345	3e-59
O65572	538	Carotenoid 9,10(9',10')-c	no	no	0.888	0.591	0.351	8e-52

>sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1

 Score =  379 bits (974), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/365 (52%), Positives = 255/365 (69%), Gaps = 10/365 (2%)

Query: 1   MLSGIYGI-ADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIIN 59
           + SG  G+ A + +     ARVL G  N   G GLANTSLAFFS++L ALGESDLPY + 
Sbjct: 202 VFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFFSNRLFALGESDLPYAVR 261

Query: 60  STREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIK 119
            T  GD+ET+GR+DFD  L  SMTAHPKTD  T ETFAF++ PV  P LT+FRFD+ G K
Sbjct: 262 LTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGETFAFRYGPV-PPFLTYFRFDSAGKK 320

Query: 120 QKDVPILSINRPTFIHDFAITKRFAIFSETQLA--VSAANVMLGKGMPTVFVPEKIPRIG 177
           Q+DVPI S+  P+F+HDFAITKR AIF+E QL   ++  +++L  G P      K PR+G
Sbjct: 321 QRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLG 380

Query: 178 IILKYATSDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKIDMVHFS 236
           +I KYA  ++EMKWF VPGFN +H  NAW+  D + +VL+A    SIE+   ++D+VH  
Sbjct: 381 VIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVVLIAPNIMSIEHTLERMDLVHAL 440

Query: 237 LEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLE 296
           +EKV+I+L TG V R+ +S RNL+   IN +++G+ +RYV+  +G  +PK+ GVVK+D+ 
Sbjct: 441 VEKVKIDLVTGIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISGVVKLDVS 500

Query: 297 K----EIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVM 352
           K    +  V+RR YG  C+GGEP FV R+  + E A+EDDG+VVTY+HDE+  ESKFLVM
Sbjct: 501 KGDRDDCTVARRMYGSGCYGGEPFFVARDPGNPE-AEEDDGYVVTYVHDEVTGESKFLVM 559

Query: 353 DAKSP 357
           DAKSP
Sbjct: 560 DAKSP 564

May be involved in carotenoid cleavage.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 9EC: 9EC: .EC: -

>sp|Q84K96|ZCD_CROSA Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus sativus GN=ZCD PE=1 SV=1

 Score =  322 bits (826), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 161/342 (47%), Positives = 230/342 (67%), Gaps = 15/342 (4%)

Query: 25  HINLKKGFGLANTSLAFFSSKLLALGESDLPYIIN-STREGDVETVGRWDFDEALFASMT 83
            ++  KG GLANTSL F + +L AL E DLPY++  S  +GD+ TVGR + +     S T
Sbjct: 2   QVDPTKGIGLANTSLQFSNGRLHALCEYDLPYVVRLSPEDGDISTVGRIE-NNVSTKSTT 60

Query: 84  AHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ-KDVPILSINRPTFIHDFAITKR 142
           AHPKTD  T ETF+F + P+  P++T+ R+D +G K   DVPI S   P+F+HDFAIT+ 
Sbjct: 61  AHPKTDPVTGETFSFSYGPI-QPYVTYSRYDCDGKKSGPDVPIFSFKEPSFVHDFAITEH 119

Query: 143 FAIFSETQLAVSAANVMLGKGM--PTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAM 200
           +A+F + Q+ +  A ++ G+ M  P +   EK+PR+G++ +YATSD+EM+WF+VPGFN +
Sbjct: 120 YAVFPDIQIVMKPAEIVRGRRMIGPDL---EKVPRLGLLPRYATSDSEMRWFDVPGFNMV 176

Query: 201 HVFNAWEN-GDDEIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNL 259
           HV NAWE  G + +V++A   + IEN   + D++H S+E  RI L++G V R +LS  NL
Sbjct: 177 HVVNAWEEEGGEVVVIVAPNVSPIENAIDRFDLLHVSVEMARIELKSGSVSRTLLSAENL 236

Query: 260 ELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLE----KEIEVSRRFYGPSCFGGEP 315
           + G I+  Y G+K+RY ++GVG  +PK+ GVVK+D E     E  V+RR +G  CFGGEP
Sbjct: 237 DFGVIHRGYSGRKSRYAYLGVGDPMPKIRGVVKVDFELAGRGECVVARREFGVGCFGGEP 296

Query: 316 LFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSP 357
            FVP +       +EDDG+VV+Y+HDE   ES F+VMDA+SP
Sbjct: 297 FFVPASSKK-SGGEEDDGYVVSYLHDEGKGESSFVVMDARSP 337

Cleaves zeaxanthin symmetrically at the 7-8 and 7'-8' double bonds to produce crocetin dialdehyde and hydroxy-beta-cyclocitral, two water-soluble precursors sequestred in vacuoles and involved in the synthesis of saffron pigment and aroma.

Crocus sativus (taxid: 82528)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 4

EC: 2

>sp|Q9C6Z1|NCED5_ARATH Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1

 Score =  256 bits (654), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/356 (38%), Positives = 212/356 (59%), Gaps = 12/356 (3%)

Query: 5   IYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREG 64
           ++G + I + +   AR L G +N K G G+AN  L +F  +LLA+ E DLPY +  T  G
Sbjct: 207 LHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDNG 266

Query: 65  DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
           D+ET+GR+DFD  L ++M AHPK D  TKE FA  +  V  P+L +F+F   G K  DV 
Sbjct: 267 DLETIGRFDFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVE 326

Query: 125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
           I  +  PT +HDFAIT+ F +  + Q+    +++ LGK  P  +  EKI R GI+ + A 
Sbjct: 327 I-PLASPTMMHDFAITENFVVIPDQQVVFKLSDMFLGKS-PVKYDGEKISRFGILPRNAK 384

Query: 185 SDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKID-MVHFSLEKVRI 242
             +EM W   P     H++NAWE+ + DE+V++ +  T  +++F++ D  ++  L ++R+
Sbjct: 385 DASEMVWVESPETFCFHLWNAWESPETDEVVVIGSCMTPADSIFNECDEQLNSVLSEIRL 444

Query: 243 NLRTGHVFRNIL----STRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKE 298
           NL+TG   R  +       NLE G +N + +G+K RY ++ + +  PK+ G  K+DL   
Sbjct: 445 NLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLSTG 504

Query: 299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
            EV   FYG   +GGEP F+PR    LE+  EDDG++++++HDE   ES+  +++A
Sbjct: 505 -EVKNHFYGGKKYGGEPFFLPRG---LESDGEDDGYIMSFVHDEESWESELHIVNA 556

Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 5

EC: 1

>sp|O49505|NCED2_ARATH 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1

 Score =  247 bits (631), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 133/355 (37%), Positives = 214/355 (60%), Gaps = 9/355 (2%)

Query: 5   IYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREG 64
           ++G + I + +   AR L G IN + G G+AN  L +F+++LLA+ E DLPY +  T+ G
Sbjct: 200 LHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDLPYQLKITQTG 259

Query: 65  DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
           D++TVGR+DFD  L ++M AHPK D  TKE  A  +  V  P+L +FRF  +G+K  ++ 
Sbjct: 260 DLQTVGRYDFDGQLKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPELE 319

Query: 125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
           I  +  PT IHDFAIT+ F +  + Q+      ++ GK  P VF  EK+ R+GI+ K AT
Sbjct: 320 I-PLETPTMIHDFAITENFVVIPDQQVVFKLGEMISGKS-PVVFDGEKVSRLGIMPKDAT 377

Query: 185 SDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKID-MVHFSLEKVRI 242
             +++ W N P     H++NAWE+ + +EIV++ +  +  +++F++ D  +   L ++RI
Sbjct: 378 EASQIIWVNSPETFCFHLWNAWESPETEEIVVIGSCMSPADSIFNERDESLRSVLSEIRI 437

Query: 243 NLRTGHVFRNILSTR---NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEI 299
           NLRT    R  L      NLE+G +N + +G+K R+ F+ +    PK+ G  K+DL    
Sbjct: 438 NLRTRKTTRRSLLVNEDVNLEIGMVNRNRLGRKTRFAFLAIAYPWPKVSGFAKVDLCTG- 496

Query: 300 EVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
           E+ +  YG   +GGEP F+P N  + E  +EDDG++  ++HDE  + S+  +++A
Sbjct: 497 EMKKYIYGGEKYGGEPFFLPGNSGNGE-ENEDDGYIFCHVHDEETKTSELQIINA 550

Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q9LRM7|NCED6_ARATH 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1

 Score =  246 bits (629), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/356 (35%), Positives = 213/356 (59%), Gaps = 14/356 (3%)

Query: 5   IYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREG 64
           ++G + + +     AR  +G ++  +G G+AN  + FF+ +LLA+ E DLPY +    +G
Sbjct: 196 LHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQG 255

Query: 65  DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
           D+ET+GR+ FD+ + +S+ AHPK D TT +     ++ +  PHL + +F+  G K +DV 
Sbjct: 256 DLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVE 315

Query: 125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
           I ++  PT IHDFAIT+ F +  + Q+    + ++ G G P ++V EK+ R G++ K   
Sbjct: 316 I-TLPEPTMIHDFAITENFVVIPDQQMVFKLSEMIRG-GSPVIYVKEKMARFGVLSKQDL 373

Query: 185 SDAEMKWFNVPGFNAMHVFNAW----ENGDDEIVLMATTATSIENLFHKI-DMVHFSLEK 239
           + +++ W +VP     H++NAW    E GD  IV++ +  +  + +F +  +     L +
Sbjct: 374 TGSDINWVDVPDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDTIFSESGEPTRVELSE 433

Query: 240 VRINLRTGHVFRNILSTR-NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKE 298
           +R+N+RT    R ++ T  NLE G IN SY+G+K+++V++ +    PK  G+ K+D++  
Sbjct: 434 IRLNMRTKESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADPWPKCSGIAKVDIQNG 493

Query: 299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
             VS   YGPS FGGEP FVP  E      +ED G+V+ ++ DE  +ES+F+V+DA
Sbjct: 494 T-VSEFNYGPSRFGGEPCFVPEGE-----GEEDKGYVMGFVRDEEKDESEFVVVDA 543

Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids. Contributes probably to abscisic acid synthesis for the induction of seed dormancy.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 5

EC: 1

>sp|O24592|NCED1_MAIZE 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2

 Score =  240 bits (612), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/356 (36%), Positives = 202/356 (56%), Gaps = 9/356 (2%)

Query: 5   IYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREG 64
           ++G + I +     AR   G ++   G G+AN  L +F+ +LLA+ E DLPY +    +G
Sbjct: 218 LHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPYHVRVADDG 277

Query: 65  DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
           D+ETVGR+DFD  L  +M AHPK D  T E  A  +  +  P+L +F F  +G K  DV 
Sbjct: 278 DLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVE 337

Query: 125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
           I  + +PT IHDFAIT+   +  + Q+ V     ML  G P V   EK  R G++ K+A 
Sbjct: 338 I-PLEQPTMIHDFAITENLVVVPDHQV-VFKLQEMLRGGSPVVLDKEKTSRFGVLPKHAA 395

Query: 185 SDAEMKWFNVPGFNAMHVFNAWEN-GDDEIVLMATTATSIENLFHKID-MVHFSLEKVRI 242
             +EM W +VP     H++NAWE+    E+V++ +  T  +++F++ D  +   L ++R+
Sbjct: 396 DASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGSCMTPADSIFNESDERLESVLTEIRL 455

Query: 243 NLRTGHVFRNIL----STRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKE 298
           + RTG   R  +       NLE+G +N + +G++ RY ++ V +  PK+ G  K+DL   
Sbjct: 456 DARTGRSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLSTG 515

Query: 299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
            E+++  YG   FGGEP FVP +        EDDG+V+T++HDE    S+ LV++A
Sbjct: 516 -ELTKFEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNA 570

Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids. Not active on the all-trans isomers of violaxanthin and neoxanthin. Contributes probably to abscisic acid synthesis for the induction of seed dormancy.

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q9M9F5|NCED9_ARATH 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1

 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/357 (36%), Positives = 208/357 (58%), Gaps = 15/357 (4%)

Query: 2   LSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINST 61
           L G  GIA ++       R L G ++   G G+AN  L +F+  LLA+ E DLPY +  T
Sbjct: 277 LHGHLGIAKLM---LFNTRGLFGLVDPTGGLGVANAGLVYFNGHLLAMSEDDLPYHVKVT 333

Query: 62  REGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQK 121
           + GD+ET GR+DFD  L ++M AHPK D  T+E FA  +  V  P+L +FRF ++G K  
Sbjct: 334 QTGDLETSGRYDFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSP 393

Query: 122 DVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILK 181
           DV I  +++PT IHDFAIT+ F +  + Q+      ++ G G P V+  +K  R GI+ K
Sbjct: 394 DVEI-PLDQPTMIHDFAITENFVVIPDQQVVFRLPEMIRG-GSPVVYDEKKKSRFGILNK 451

Query: 182 YATSDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKID-MVHFSLEK 239
            A   + ++W  VP     H++N+WE  + DE+V++ +  T  +++F++ D  +   L +
Sbjct: 452 NAKDASSIQWIEVPDCFCFHLWNSWEEPETDEVVVIGSCMTPPDSIFNEHDETLQSVLSE 511

Query: 240 VRINLRTGHVFRN--ILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEK 297
           +R+NL+TG   R   I    NLE G +N + +G+K RY ++ + +  PK+ G  K+DL  
Sbjct: 512 IRLNLKTGESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSGFAKVDLST 571

Query: 298 EIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
             E+ +  YG   +GGEPLF+P  +      +ED G+++ ++HDE   +S+  +++A
Sbjct: 572 G-EIRKYIYGEGKYGGEPLFLPSGD-----GEEDGGYIMVFVHDEEKVKSELQLINA 622

Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids. Contributes probably to abscisic acid synthesis for the induction of seed dormancy.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q9M6E8|NCED1_PHAVU 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1

 Score =  231 bits (590), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 206/358 (57%), Gaps = 15/358 (4%)

Query: 5   IYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREG 64
           ++G + I + +   AR L   ++   G G+AN  L +F++ LLA+ E DLPY +  T  G
Sbjct: 236 LHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLLAMSEDDLPYHVRITSNG 295

Query: 65  DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
           D+ TVGR+DF+  L ++M AHPK D    +  A  +  V  P+L +FRF A+G+K  DV 
Sbjct: 296 DLTTVGRYDFNGQLNSTMIAHPKLDPVNGDLHALSYDVVQKPYLKYFRFSADGVKSPDVE 355

Query: 125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
           I  +  PT +HDFAIT+ F +  + Q+      ++ G G P V+   K  R GI+ K A 
Sbjct: 356 I-PLKEPTMMHDFAITENFVVVPDQQVVFKLTEMITG-GSPVVYDKNKTSRFGILDKNAK 413

Query: 185 SDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKID-MVHFSLEKVRI 242
               M+W + P     H++NAWE  + DEIV++ +  T  +++F++ D  +   L ++R+
Sbjct: 414 DANAMRWIDAPECFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRL 473

Query: 243 NLRTGHVFRN-ILSTR---NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKE 298
           NLRTG   R  I+S     NLE G +N + +G+K ++ ++ + +  PK+ G  K+DL   
Sbjct: 474 NLRTGKSTRRPIISDAEQVNLEAGMVNRNKLGRKTQFAYLALAEPWPKVSGFAKVDLFSG 533

Query: 299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
            EV +  YG   FGGEPLF+P  E      +E DG+++ ++HDE   +S+  +++A++
Sbjct: 534 -EVQKYMYGEEKFGGEPLFLPNGE------EEGDGYILAFVHDEKEWKSELQIVNAQN 584

Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids, in response to water stress. Active on 9-cis-violaxanthin and 9'-cis-neoxanthin, but not on the all-trans isomers of violaxanthin and neoxanthin.

Phaseolus vulgaris (taxid: 3885)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 5

EC: 1

>sp|Q9LRR7|NCED3_ARATH 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1

 Score =  229 bits (584), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 207/359 (57%), Gaps = 15/359 (4%)

Query: 5   IYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREG 64
           ++G   I + +   AR   G ++   G G+AN  L +F+ +LLA+ E DLPY +  T  G
Sbjct: 217 LHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNG 276

Query: 65  DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
           D++TVGR+DFD  L ++M AHPK D  + E FA  +  V  P+L +FRF  +G K  DV 
Sbjct: 277 DLKTVGRFDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVE 336

Query: 125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
           I  +++PT +HDFAIT+ F +  + Q+      ++ G G P V+   K+ R GI+ KYA 
Sbjct: 337 I-QLDQPTMMHDFAITENFVVVPDQQVVFKLPEMIRG-GSPVVYDKNKVARFGILDKYAE 394

Query: 185 SDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKIDM-VHFSLEKVRI 242
             + +KW + P     H++NAWE  + DE+V++ +  T  +++F++ D  +   L ++R+
Sbjct: 395 DSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPDSIFNESDENLKSVLSEIRL 454

Query: 243 NLRTGHVFRN-ILSTR----NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEK 297
           NL+TG   R  I+S      NLE G +N + +G+K ++ ++ + +  PK+ G  K+DL  
Sbjct: 455 NLKTGESTRRPIISNEDQQVNLEAGMVNRNMLGRKTKFAYLALAEPWPKVSGFAKVDLTT 514

Query: 298 EIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
             EV +  YG + +GGEPLF+P      +       +++ ++HDE   +S+  +++A S
Sbjct: 515 G-EVKKHLYGDNRYGGEPLFLPGEGGEEDEG-----YILCFVHDEKTWKSELQIVNAVS 567

Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids, in response to water stress.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 3

EC: .

EC: 1

EC: 1

EC: .

EC: 5

EC: 1

>sp|O65572|CCD1_ARATH Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2

 Score =  204 bits (519), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/344 (35%), Positives = 184/344 (53%), Gaps = 26/344 (7%)

Query: 31  GFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDM 90
           G G ANT+L +   KLLAL E+D PY+I    +GD++T+G  D+D+ L  S TAHPK D 
Sbjct: 168 GNGTANTALVYHHGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRLTHSFTAHPKVDP 227

Query: 91  TTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQ 150
            T E F F +S    P+LT+     +GI    VPI +I+ P  +HDFAIT+ +AIF +  
Sbjct: 228 VTGEMFTFGYSHT-PPYLTYRVISKDGIMHDPVPI-TISEPIMMHDFAITETYAIFMDLP 285

Query: 151 LAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGD 210
           +      ++  K M   F P K  R G++ +YA  +  ++WF +P     H  NAWE  +
Sbjct: 286 MHFRPKEMVKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEE-E 344

Query: 211 DEIVLMATTATSIE------NLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSI 264
           DE+VL+     + +       +  K++     L ++R N++TG   +  LS   ++   I
Sbjct: 345 DEVVLITCRLENPDLDMVSGKVKEKLENFGNELYEMRFNMKTGSASQKKLSASAVDFPRI 404

Query: 265 NSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRF------------YGPSCFG 312
           N  Y GKK RYV+  +   I K+ G++K DL  E E  +R              G   +G
Sbjct: 405 NECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRMLEVGGNIKGIYDLGEGRYG 464

Query: 313 GEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
            E ++VPR     E A+EDDG+++ ++HDE   +S   V+DAK+
Sbjct: 465 SEAIYVPR-----ETAEEDDGYLIFFVHDENTGKSCVTVIDAKT 503

Cleaves a variety of carotenoids symmetrically at both the 9-10 and 9'-10' double bonds. Active on beta,beta-carotene, lutein, zeaxanthin, all-trans-violaxanthin, 9-cis-violaxanthin and 9'-cis-neoxanthin. With most substrates, the carotenoid is symmetrically cleaved. Probably not involved in abscisic acid biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: n

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
83628264	560	carotenoid cleavage dioxygenase 4b [Citr	0.997	0.637	0.890	0.0
224143680	584	predicted protein [Populus trichocarpa]	0.997	0.611	0.662	1e-141
224102979	594	predicted protein [Populus trichocarpa]	0.997	0.601	0.662	1e-141
224102977	585	predicted protein [Populus trichocarpa]	0.997	0.610	0.656	1e-140
224102975	526	predicted protein [Populus trichocarpa]	0.997	0.678	0.659	1e-140
359489962	582	PREDICTED: probable carotenoid cleavage	0.980	0.603	0.595	1e-126
297737258	562	unnamed protein product [Vitis vinifera]	0.893	0.569	0.612	1e-116
255557829	618	9-cis-epoxycarotenoid dioxygenase, putat	0.988	0.572	0.524	1e-107
224146522	589	predicted protein [Populus trichocarpa]	0.988	0.601	0.513	1e-106
224083508	507	predicted protein [Populus trichocarpa]	0.988	0.698	0.508	1e-105

>gi|83628264|gb|ABC26012.1| carotenoid cleavage dioxygenase 4b [Citrus clementina]

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/357 (89%), Positives = 338/357 (94%)

Query: 1   MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINS 60
           + SG YG+ D++QCVA+ ARVLMGH+NLKKGFGLANTSLAFFSSKLLALGESDLPYII  
Sbjct: 170 VFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTSLAFFSSKLLALGESDLPYIIKC 229

Query: 61  TREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ 120
           TREGD+ET+GRWDFDE LFASMTAHPKTDMTTKETFAFKFSP FSPHLTF RFDANG+KQ
Sbjct: 230 TREGDIETLGRWDFDEELFASMTAHPKTDMTTKETFAFKFSPFFSPHLTFSRFDANGVKQ 289

Query: 121 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIIL 180
           KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVF PEK+PRIGIIL
Sbjct: 290 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIIL 349

Query: 181 KYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKV 240
           KYATSDAEMKWFNVPGFNAMHVFNAWENG+DE+VL+AT ATSIENLF K+DMVH SLEKV
Sbjct: 350 KYATSDAEMKWFNVPGFNAMHVFNAWENGEDEVVLIATNATSIENLFLKVDMVHISLEKV 409

Query: 241 RINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIE 300
           RINLRTG+V RNILS RNLELGSINSSYIGKKNRYVF+GVGKEIPKM+GVVKIDLEKEIE
Sbjct: 410 RINLRTGNVSRNILSARNLELGSINSSYIGKKNRYVFVGVGKEIPKMQGVVKIDLEKEIE 469

Query: 301 VSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSP 357
           VSRRFYGP CFGGEPLFVPRN DH++AADEDDGFVVTYIHDE + ESKFLVMDAKSP
Sbjct: 470 VSRRFYGPGCFGGEPLFVPRNGDHVDAADEDDGFVVTYIHDENYGESKFLVMDAKSP 526

Source: Citrus clementina

Species: Citrus clementina

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143680|ref|XP_002336069.1| predicted protein [Populus trichocarpa] gi|222869885|gb|EEF07016.1| predicted protein [Populus trichocarpa]

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 237/358 (66%), Positives = 288/358 (80%), Gaps = 1/358 (0%)

Query: 1   MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINS 60
           +LSG Y + D++  V  + RVL G INL +GFG+ANTSLAFFS+KLLAL ESDLPY+I  
Sbjct: 195 ILSGFYSLPDVLAYVMVLGRVLCGQINLMRGFGMANTSLAFFSNKLLALCESDLPYVIGM 254

Query: 61  TREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ 120
           T+EGD+ET+GRWDFD  LFASMTAHPK D  TKETFAF+ +P F P++T+F F+ +G+KQ
Sbjct: 255 TQEGDIETLGRWDFDRKLFASMTAHPKVDKDTKETFAFQCNPSFFPYVTYFYFNEDGVKQ 314

Query: 121 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIIL 180
           +DVP+LSIN+PT IHDFAITKRFA+F ETQL V   NVMLG+GMP V   +K+PRIGI+ 
Sbjct: 315 RDVPLLSINQPTPIHDFAITKRFAVFPETQLVVEPRNVMLGRGMPVVCEQKKVPRIGILP 374

Query: 181 KYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKV 240
           +YA SD+  +WF VPGFNAMHV NAWENGDDE+VL+A    SI N+FHKI+ VHFSLEK+
Sbjct: 375 RYAESDSNTRWFPVPGFNAMHVTNAWENGDDEVVLVAPNVLSIANVFHKIEKVHFSLEKL 434

Query: 241 RINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIE 300
            IN RTG V R ILS R+LELGSIN  YIGKKNRY ++G+ +++PKM G+ KIDLEKE E
Sbjct: 435 TINTRTGKVSRKILSKRSLELGSINPYYIGKKNRYAYLGIAEKVPKMSGLAKIDLEKECE 494

Query: 301 VSRRFYGPSCFGGEPLFVPRNEDHLEA-ADEDDGFVVTYIHDEIHEESKFLVMDAKSP 357
           VSRR YGP CFGGEPLFVPRN + +++  DEDDGFVV+Y+HDE   +S F VMDAKSP
Sbjct: 495 VSRRLYGPGCFGGEPLFVPRNANAVKSDEDEDDGFVVSYVHDENSGQSNFTVMDAKSP 552

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102979|ref|XP_002312878.1| predicted protein [Populus trichocarpa] gi|222849286|gb|EEE86833.1| predicted protein [Populus trichocarpa]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 237/358 (66%), Positives = 287/358 (80%), Gaps = 1/358 (0%)

Query: 1   MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINS 60
           +LSG Y + D++  V    RVL G INL +GFG+ANTSLAFFS+KLLAL ESDLPY+I  
Sbjct: 205 ILSGFYSLPDVLAYVMVAGRVLCGQINLMRGFGMANTSLAFFSNKLLALCESDLPYVIGM 264

Query: 61  TREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ 120
           T+EGD+ET+GRWDFD  LFASMTAHPK D  TKETFAF+ +P F P++T+F F+ +G+KQ
Sbjct: 265 TQEGDIETLGRWDFDRKLFASMTAHPKVDKDTKETFAFQCNPSFFPYVTYFYFNEDGVKQ 324

Query: 121 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIIL 180
           +DVP+LSIN+PT IHDFAITKRFA+F ETQL V   NVMLG+GMP V   +K+PRIGI+ 
Sbjct: 325 RDVPLLSINQPTPIHDFAITKRFAVFPETQLVVEPRNVMLGRGMPVVCEQKKVPRIGILP 384

Query: 181 KYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKV 240
           +YA SD+  +WF VPGFNAMHV NAWENGDDE+VL+A    SI N+FHKI+ VHFSLEK+
Sbjct: 385 RYAESDSNTRWFPVPGFNAMHVTNAWENGDDEVVLVAPNVLSIANVFHKIEKVHFSLEKL 444

Query: 241 RINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIE 300
            IN RTG V R ILS R+LELGSIN  YIGKKNRY ++G+ +++PKM G+ KIDLEKE E
Sbjct: 445 TINTRTGKVSRKILSKRSLELGSINPYYIGKKNRYAYLGIAEKVPKMSGLAKIDLEKECE 504

Query: 301 VSRRFYGPSCFGGEPLFVPRNEDHLEA-ADEDDGFVVTYIHDEIHEESKFLVMDAKSP 357
           VSRR YGP CFGGEPLFVPRN + +++  DEDDGFVV+Y+HDE   +S F VMDAKSP
Sbjct: 505 VSRRLYGPGCFGGEPLFVPRNANAVKSDEDEDDGFVVSYVHDENSGQSNFTVMDAKSP 562

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102977|ref|XP_002312877.1| predicted protein [Populus trichocarpa] gi|222849285|gb|EEE86832.1| predicted protein [Populus trichocarpa]

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/358 (65%), Positives = 288/358 (80%), Gaps = 1/358 (0%)

Query: 1   MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINS 60
           +LSG Y + D++  V    RVL G INL +GFG+ANTSLAFFS+KLLAL ESDLPY+I  
Sbjct: 196 ILSGFYSLPDVLAYVMVAGRVLCGQINLMRGFGMANTSLAFFSNKLLALCESDLPYVIGM 255

Query: 61  TREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ 120
           T+EGD+ET+GRWDFD  LFASMTAHPK D  T+ETFAF+ +P F P++T+F F+ +G+KQ
Sbjct: 256 TQEGDIETLGRWDFDRKLFASMTAHPKVDKDTRETFAFQCNPSFFPYVTYFYFNEDGVKQ 315

Query: 121 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIIL 180
           +DVP+LSIN+PT IHDFAITKRFAIF ETQL V   NVMLG+GMP VF  +K+PRIGI+ 
Sbjct: 316 RDVPLLSINQPTPIHDFAITKRFAIFPETQLVVEPTNVMLGRGMPVVFEQKKVPRIGILP 375

Query: 181 KYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKV 240
           +YA SD+  +WF VPGFNAMHV NAWENGDDE+VL+A    +IEN+FH+I+ VH+SLEK+
Sbjct: 376 RYAESDSNTRWFPVPGFNAMHVTNAWENGDDEVVLVAPNVLNIENVFHEIEKVHYSLEKL 435

Query: 241 RINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIE 300
            IN RTG V R ILS R+LELGSIN SYIGKKNRY ++G+ +++PKM G+ KIDLEKE E
Sbjct: 436 TINTRTGKVSRKILSKRSLELGSINPSYIGKKNRYAYLGIAEKVPKMSGLAKIDLEKECE 495

Query: 301 VSRRFYGPSCFGGEPLFVPRNEDHLEA-ADEDDGFVVTYIHDEIHEESKFLVMDAKSP 357
           VSRR YG  CFGGEPLFVPR  + +++  DEDDGFVV+Y+HDE   +S F VMDAKSP
Sbjct: 496 VSRRLYGSGCFGGEPLFVPRKGNAVKSDEDEDDGFVVSYVHDENSGQSNFTVMDAKSP 553

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102975|ref|XP_002312876.1| predicted protein [Populus trichocarpa] gi|222849284|gb|EEE86831.1| predicted protein [Populus trichocarpa]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/358 (65%), Positives = 286/358 (79%), Gaps = 1/358 (0%)

Query: 1   MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINS 60
           +LSG Y + D++  V AV RVL GHINL +GFG+ANTSLAFFS+KLLAL ESDLPY+I  
Sbjct: 134 ILSGFYSLPDVLTYVMAVGRVLCGHINLMRGFGMANTSLAFFSNKLLALCESDLPYVIGM 193

Query: 61  TREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ 120
            +EGD+ET+GRWDFD  LFASMTAHPK D  TKE FAF+ +P F P++T+F F+ +G+KQ
Sbjct: 194 AQEGDIETLGRWDFDRKLFASMTAHPKVDKDTKEAFAFQCNPSFFPYVTYFYFNEDGVKQ 253

Query: 121 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIIL 180
           +DVP+LSIN+PT IHDFAITKRFAIF ETQL V   NVMLG+GMP V   +K+PRIGI+ 
Sbjct: 254 RDVPLLSINQPTPIHDFAITKRFAIFPETQLVVEPTNVMLGRGMPVVCEQKKVPRIGILP 313

Query: 181 KYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKV 240
           +YA SD+  +WF VPGFNAMHV NAWENGDDE+VL+A    SI N+FHKI+ VHFSLEK+
Sbjct: 314 RYAESDSNTRWFPVPGFNAMHVTNAWENGDDEVVLVAPNVLSIANVFHKIEKVHFSLEKL 373

Query: 241 RINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIE 300
            IN R G V RNILS R+LELGSIN  YIGKKNRY ++G+ +++PKM G+ KIDLEKE E
Sbjct: 374 TINTRAGKVSRNILSKRSLELGSINPYYIGKKNRYAYLGIAEKVPKMSGLAKIDLEKECE 433

Query: 301 VSRRFYGPSCFGGEPLFVPRNEDHLEA-ADEDDGFVVTYIHDEIHEESKFLVMDAKSP 357
           VSRR YG  CFGGEPLFVPR  + +++  DEDDGFVV+Y+HD+   +S F VMDAKSP
Sbjct: 434 VSRRLYGSGCFGGEPLFVPRKANAVKSDEDEDDGFVVSYVHDDSSGQSNFTVMDAKSP 491

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489962|ref|XP_002269538.2| PREDICTED: probable carotenoid cleavage dioxygenase 4, chloroplastic-like [Vitis vinifera] gi|147797202|emb|CAN64863.1| hypothetical protein VITISV_042539 [Vitis vinifera]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 212/356 (59%), Positives = 276/356 (77%), Gaps = 5/356 (1%)

Query: 1   MLSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINS 60
           +LSG + + D+ +C  A+ RV+ G I+L+KGFGLANTSL+ FS++L ALGESDLPY I+ 
Sbjct: 199 ILSGFHSVVDLGRCAIAIGRVMKGQIDLRKGFGLANTSLSLFSNRLFALGESDLPYSIHL 258

Query: 61  TREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ 120
           + EGD+ET+GR DFD   F +MTAHPK D  T ETFAF+ SP+  P++TFF  D  G KQ
Sbjct: 259 SEEGDIETIGRCDFDGKAFINMTAHPKIDPETGETFAFRCSPI-PPYITFFSIDKEGSKQ 317

Query: 121 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIIL 180
           +DVPI S+  PTF+HDF+ITK++ +FSE+Q+ ++   +M+ KGMP     +K+PRIG++ 
Sbjct: 318 QDVPIFSMTDPTFVHDFSITKQYIVFSESQIEMNPLRLMMCKGMPVSAELDKVPRIGVLP 377

Query: 181 KYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEKV 240
           +YA++D+E++WF  PGFNAMH  NAWE GD+EI+L+A  A SIENLFH I+ VHFSLEKV
Sbjct: 378 RYASTDSEIRWFEAPGFNAMHAINAWEEGDEEIILVAPNAISIENLFHSIEKVHFSLEKV 437

Query: 241 RINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIE 300
           RINLR+G V R  LS +NLELGSIN SY+GK+NRY +MG+GK IPKM GVVKIDLE E E
Sbjct: 438 RINLRSGSVTRTTLSQKNLELGSINPSYVGKRNRYGYMGIGKMIPKMSGVVKIDLELECE 497

Query: 301 VSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
           VSRR YG  CFGGEPLFV ++     A++EDDG++V+Y+HDE    S+F+VMDAKS
Sbjct: 498 VSRRLYGAGCFGGEPLFVAKD----GASEEDDGYIVSYVHDEKSGASRFVVMDAKS 549

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737258|emb|CBI26459.3| unnamed protein product [Vitis vinifera]

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/325 (61%), Positives = 254/325 (78%), Gaps = 5/325 (1%)

Query: 32  FGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFASMTAHPKTDMT 91
           FGLANTSL+ FS++L ALGESDLPY I+ + EGD+ET+GR DFD   F +MTAHPK D  
Sbjct: 210 FGLANTSLSLFSNRLFALGESDLPYSIHLSEEGDIETIGRCDFDGKAFINMTAHPKIDPE 269

Query: 92  TKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQL 151
           T ETFAF+ SP+  P++TFF  D  G KQ+DVPI S+  PTF+HDF+ITK++ +FSE+Q+
Sbjct: 270 TGETFAFRCSPI-PPYITFFSIDKEGSKQQDVPIFSMTDPTFVHDFSITKQYIVFSESQI 328

Query: 152 AVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDD 211
            ++   +M+ KGMP     +K+PRIG++ +YA++D+E++WF  PGFNAMH  NAWE GD+
Sbjct: 329 EMNPLRLMMCKGMPVSAELDKVPRIGVLPRYASTDSEIRWFEAPGFNAMHAINAWEEGDE 388

Query: 212 EIVLMATTATSIENLFHKIDMVHFSLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGK 271
           EI+L+A  A SIENLFH I+ VHFSLEKVRINLR+G V R  LS +NLELGSIN SY+GK
Sbjct: 389 EIILVAPNAISIENLFHSIEKVHFSLEKVRINLRSGSVTRTTLSQKNLELGSINPSYVGK 448

Query: 272 KNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADED 331
           +NRY +MG+GK IPKM GVVKIDLE E EVSRR YG  CFGGEPLFV ++     A++ED
Sbjct: 449 RNRYGYMGIGKMIPKMSGVVKIDLELECEVSRRLYGAGCFGGEPLFVAKD----GASEED 504

Query: 332 DGFVVTYIHDEIHEESKFLVMDAKS 356
           DG++V+Y+HDE    S+F+VMDAKS
Sbjct: 505 DGYIVSYVHDEKSGASRFVVMDAKS 529

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557829|ref|XP_002519944.1| 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis] gi|223540990|gb|EEF42548.1| 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/362 (52%), Positives = 260/362 (71%), Gaps = 8/362 (2%)

Query: 1   MLSGIYGIA-DIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIIN 59
           + SG  G+A    +   + AR+L G  N   G GLANTSLAFF ++L ALGESDLPY + 
Sbjct: 229 VFSGFNGLAASATRGALSAARILSGQFNPVNGIGLANTSLAFFGNRLYALGESDLPYTVR 288

Query: 60  STREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIK 119
            T  GD+ET+GR DF+  LF SMTAHPK D+ T E FAF++ PV  P LT+FRFD+ G K
Sbjct: 289 LTLNGDIETLGRHDFEGKLFMSMTAHPKIDLETGEAFAFRYGPV-PPFLTYFRFDSKGNK 347

Query: 120 QKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGII 179
           Q DVPI S+ RP+F+HDFAI+K++AIF++ Q+ ++  +++ G G P    P K+PR+GII
Sbjct: 348 QPDVPIFSMVRPSFLHDFAISKKYAIFADIQIVMNPMDMIFGGGSPVGADPTKVPRLGII 407

Query: 180 LKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEK 239
            +YA  ++EM+WF+VPGFN +H  NAW+  +D IV++A    S+E+   ++++VH  +EK
Sbjct: 408 PRYAKDESEMRWFDVPGFNLIHAINAWDE-EDAIVMLAPNILSVEHTLERMELVHALVEK 466

Query: 240 VRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEK-- 297
           VRI+L+TG V RN +S RNL+   IN +YIGKKNRYV+  +G  +PK+ GVVK+D+ K  
Sbjct: 467 VRIDLKTGIVTRNPVSARNLDFAVINPAYIGKKNRYVYAAIGDPMPKISGVVKLDVSKGD 526

Query: 298 --EIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAK 355
             E  V+ R +GP C+GGEP FV R  D+++ A+EDDGFVV+Y+HDEI  ESKFLVMDA+
Sbjct: 527 RQECTVASRMFGPKCYGGEPFFVAREPDNID-AEEDDGFVVSYVHDEIAGESKFLVMDAR 585

Query: 356 SP 357
           SP
Sbjct: 586 SP 587

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146522|ref|XP_002326037.1| predicted protein [Populus trichocarpa] gi|222862912|gb|EEF00419.1| predicted protein [Populus trichocarpa]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/362 (51%), Positives = 255/362 (70%), Gaps = 8/362 (2%)

Query: 1   MLSGIYGIA-DIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIIN 59
           + SG  G+A    +   + AR+L G  N   G GLANTSLA+F ++L ALGESDLPY + 
Sbjct: 200 VFSGFNGLAASAARGALSAARILAGQFNPANGIGLANTSLAYFGNRLYALGESDLPYAVR 259

Query: 60  STREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIK 119
            T  GD+ET+GR DFD  L  SMTAHPK D+ T E FAF++ PV  P LT+F FD NG K
Sbjct: 260 LTSNGDIETLGRHDFDRKLLMSMTAHPKVDLETGEAFAFRYGPV-PPFLTYFHFDGNGNK 318

Query: 120 QKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGII 179
           Q DVPI S+ RP+F+HDF I+ ++AIF++ Q+ ++   ++ G G P    P K+ R+GII
Sbjct: 319 QPDVPIFSMTRPSFLHDFGISSKYAIFADIQIGMNPMEMIFGGGSPVGSDPAKVSRLGII 378

Query: 180 LKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEK 239
            +YAT ++EMKWF+VPGFN +H  NAW+  +D +V++A    S+E+   ++D++H  +EK
Sbjct: 379 PRYATDESEMKWFDVPGFNIIHAINAWDE-EDAVVILAPNILSVEHTLERMDLIHALVEK 437

Query: 240 VRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEK-- 297
           VRI+L+TG V RN +S RNL+ G IN +Y+GKKNR+V+  +G  +PK+ GVVK+D+ K  
Sbjct: 438 VRIDLKTGIVTRNPVSARNLDFGVINPAYLGKKNRFVYAAIGDPMPKISGVVKLDVSKGE 497

Query: 298 --EIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAK 355
             E  V+ R +GP C+GGEP FV R  ++ E A+EDDG+VV+Y+HDEI  ESKFLVMDAK
Sbjct: 498 RQECTVASRIFGPRCYGGEPFFVAREPENPE-AEEDDGYVVSYVHDEIAGESKFLVMDAK 556

Query: 356 SP 357
           SP
Sbjct: 557 SP 558

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083508|ref|XP_002307055.1| predicted protein [Populus trichocarpa] gi|222856504|gb|EEE94051.1| predicted protein [Populus trichocarpa]

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/362 (50%), Positives = 255/362 (70%), Gaps = 8/362 (2%)

Query: 1   MLSGIYGIA-DIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIIN 59
           + SG  G+A    +   +  R+L G  N   G GLANTSLA+F ++L ALGESDLPY + 
Sbjct: 118 VFSGFNGLAASAARGALSAVRILAGQFNPANGIGLANTSLAYFGNRLYALGESDLPYAVR 177

Query: 60  STREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIK 119
            T  GD+ET+GR DFD  L  SMTAHPKTD+ T E FAF++ PV  P LT+F FD NG K
Sbjct: 178 LTSNGDIETLGRHDFDGKLLMSMTAHPKTDLETGEAFAFRYGPV-PPFLTYFHFDGNGNK 236

Query: 120 QKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGII 179
           Q DVPI S+ RP+F+HDF I+ ++AIF++ Q+ ++   ++ G G P    P K+PR+GII
Sbjct: 237 QPDVPIFSMTRPSFLHDFGISSKYAIFADIQIGMNPMEMIFGGGSPVGSDPAKVPRLGII 296

Query: 180 LKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFSLEK 239
            +YA  ++EMKWF+VPGFN +H  NAW+  +D IV++A    S+E+   ++D++H  +EK
Sbjct: 297 PRYAKDESEMKWFDVPGFNVIHAINAWDE-EDAIVMLAPNILSVEHTLERMDLIHALVEK 355

Query: 240 VRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEK-- 297
           VRI+L+TG V RN +S RNL+ G IN +Y+GKKNR+V+  +G  +PK+ GVVK+D+ K  
Sbjct: 356 VRIDLKTGIVTRNPVSARNLDFGVINPAYLGKKNRFVYAAIGDPMPKISGVVKLDVSKGE 415

Query: 298 --EIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAK 355
             E  V+ R YGP C+GGEP FV R  ++ E A+EDDG+VV+Y+HDE+  ES+FLV+DA+
Sbjct: 416 RQECTVASRIYGPRCYGGEPFFVAREPENPE-AEEDDGYVVSYVHDEMAGESRFLVIDAR 474

Query: 356 SP 357
           SP
Sbjct: 475 SP 476

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
TAIR|locus:2134796	595	NCED4 "nine-cis-epoxycarotenoi	0.991	0.596	0.501	1.7e-91
TAIR|locus:2202492	589	NCED5 "nine-cis-epoxycarotenoi	0.960	0.584	0.370	2.1e-61
TAIR|locus:2124489	583	NCED2 "nine-cis-epoxycarotenoi	0.966	0.593	0.360	1.9e-58
TAIR|locus:2093751	577	NCED6 "nine-cis-epoxycarotenoi	0.955	0.592	0.339	6.6e-58
TAIR|locus:2091652	599	NCED3 "nine-cis-epoxycarotenoi	0.960	0.574	0.342	4.6e-57
TAIR|locus:2032085	657	NCED9 "nine-cis-epoxycarotenoi	0.955	0.520	0.344	8.6e-56
TAIR|locus:2087418	538	CCD1 "carotenoid cleavage diox	0.972	0.646	0.322	1.3e-43
UNIPROTKB|Q83CU2	394	CBU_1011 "Lignostilbene-alpha,	0.804	0.730	0.263	3.3e-14
TIGR_CMR|CBU_1011	394	CBU_1011 "dioxygenase, putativ	0.804	0.730	0.263	3.3e-14
TAIR|locus:2134093	570	CCD8 "carotenoid cleavage diox	0.405	0.254	0.25	3.9e-10

TAIR|locus:2134796 NCED4 "nine-cis-epoxycarotenoid dioxygenase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
 Identities = 183/365 (50%), Positives = 244/365 (66%)

Query:     1 MLSGIYGI-ADIIQCVAAVARVLMGHINLKKGFGLANTXXXXXXXXXXXXGESDLPYIIN 59
             + SG  G+ A + +     ARVL G  N   G GLANT            GESDLPY + 
Sbjct:   202 VFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFFSNRLFALGESDLPYAVR 261

Query:    60 STREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIK 119
              T  GD+ET+GR+DFD  L  SMTAHPKTD  T ETFAF++ PV  P LT+FRFD+ G K
Sbjct:   262 LTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGETFAFRYGPV-PPFLTYFRFDSAGKK 320

Query:   120 QKDVPILSINRPTFIHDFAITKRFAIFSETQLAV--SAANVMLGKGMPTVFVPEKIPRIG 177
             Q+DVPI S+  P+F+HDFAITKR AIF+E QL +  +  +++L  G P      K PR+G
Sbjct:   321 QRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLG 380

Query:   178 IILKYATSDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKIDMVHFS 236
             +I KYA  ++EMKWF VPGFN +H  NAW+  D + +VL+A    SIE+   ++D+VH  
Sbjct:   381 VIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVVLIAPNIMSIEHTLERMDLVHAL 440

Query:   237 LEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLE 296
             +EKV+I+L TG V R+ +S RNL+   IN +++G+ +RYV+  +G  +PK+ GVVK+D+ 
Sbjct:   441 VEKVKIDLVTGIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISGVVKLDVS 500

Query:   297 K----EIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVM 352
             K    +  V+RR YG  C+GGEP FV R+  + EA +EDDG+VVTY+HDE+  ESKFLVM
Sbjct:   501 KGDRDDCTVARRMYGSGCYGGEPFFVARDPGNPEA-EEDDGYVVTYVHDEVTGESKFLVM 559

Query:   353 DAKSP 357
             DAKSP
Sbjct:   560 DAKSP 564

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010287 "plastoglobule" evidence=IDA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

TAIR|locus:2202492 NCED5 "nine-cis-epoxycarotenoid dioxygenase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 132/356 (37%), Positives = 206/356 (57%)

Query:     5 IYGIADIIQCVAAVARVLMGHINLKKGFGLANTXXXXXXXXXXXXGESDLPYIINSTREG 64
             ++G + I + +   AR L G +N K G G+AN              E DLPY +  T  G
Sbjct:   207 LHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDNG 266

Query:    65 DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
             D+ET+GR+DFD  L ++M AHPK D  TKE FA  +  V  P+L +F+F   G K  DV 
Sbjct:   267 DLETIGRFDFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVE 326

Query:   125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
             I  +  PT +HDFAIT+ F +  + Q+    +++ LGK  P  +  EKI R GI+ + A 
Sbjct:   327 I-PLASPTMMHDFAITENFVVIPDQQVVFKLSDMFLGKS-PVKYDGEKISRFGILPRNAK 384

Query:   185 SDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKID-MVHFSLEKVRI 242
               +EM W   P     H++NAWE+ + DE+V++ +  T  +++F++ D  ++  L ++R+
Sbjct:   385 DASEMVWVESPETFCFHLWNAWESPETDEVVVIGSCMTPADSIFNECDEQLNSVLSEIRL 444

Query:   243 NLRTGHVFRNIL---STR-NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKE 298
             NL+TG   R  +   S + NLE G +N + +G+K RY ++ + +  PK+ G  K+DL   
Sbjct:   445 NLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLSTG 504

Query:   299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
              EV   FYG   +GGEP F+PR    LE+  EDDG++++++HDE   ES+  +++A
Sbjct:   505 -EVKNHFYGGKKYGGEPFFLPRG---LESDGEDDGYIMSFVHDEESWESELHIVNA 556

GO:0009507 "chloroplast" evidence=ISM

GO:0009579 "thylakoid" evidence=IDA

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP;TAS

GO:0045549 "9-cis-epoxycarotenoid dioxygenase activity" evidence=TAS

GO:0009414 "response to water deprivation" evidence=IGI

GO:0010162 "seed dormancy process" evidence=IGI

TAIR|locus:2124489 NCED2 "nine-cis-epoxycarotenoid dioxygenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 128/355 (36%), Positives = 204/355 (57%)

Query:     5 IYGIADIIQCVAAVARVLMGHINLKKGFGLANTXXXXXXXXXXXXGESDLPYIINSTREG 64
             ++G + I + +   AR L G IN + G G+AN              E DLPY +  T+ G
Sbjct:   200 LHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDLPYQLKITQTG 259

Query:    65 DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
             D++TVGR+DFD  L ++M AHPK D  TKE  A  +  V  P+L +FRF  +G+K  ++ 
Sbjct:   260 DLQTVGRYDFDGQLKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPELE 319

Query:   125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
             I  +  PT IHDFAIT+ F +  + Q+      ++ GK  P VF  EK+ R+GI+ K AT
Sbjct:   320 I-PLETPTMIHDFAITENFVVIPDQQVVFKLGEMISGKS-PVVFDGEKVSRLGIMPKDAT 377

Query:   185 SDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKID-MVHFSLEKVRI 242
               +++ W N P     H++NAWE+ + +EIV++ +  +  +++F++ D  +   L ++RI
Sbjct:   378 EASQIIWVNSPETFCFHLWNAWESPETEEIVVIGSCMSPADSIFNERDESLRSVLSEIRI 437

Query:   243 NLRTGHVFRNILSTR---NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEI 299
             NLRT    R  L      NLE+G +N + +G+K R+ F+ +    PK+ G  K+DL    
Sbjct:   438 NLRTRKTTRRSLLVNEDVNLEIGMVNRNRLGRKTRFAFLAIAYPWPKVSGFAKVDLCTG- 496

Query:   300 EVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
             E+ +  YG   +GGEP F+P N  + E  +EDDG++  ++HDE  + S+  +++A
Sbjct:   497 EMKKYIYGGEKYGGEPFFLPGNSGNGEE-NEDDGYIFCHVHDEETKTSELQIINA 550

GO:0009507 "chloroplast" evidence=ISM

GO:0045549 "9-cis-epoxycarotenoid dioxygenase activity" evidence=ISS;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009688 "abscisic acid biosynthetic process" evidence=ISS

TAIR|locus:2093751 NCED6 "nine-cis-epoxycarotenoid dioxygenase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
 Identities = 121/356 (33%), Positives = 204/356 (57%)

Query:     5 IYGIADIIQCVAAVARVLMGHINLKKGFGLANTXXXXXXXXXXXXGESDLPYIINSTREG 64
             ++G + + +     AR  +G ++  +G G+AN              E DLPY +    +G
Sbjct:   196 LHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQG 255

Query:    65 DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
             D+ET+GR+ FD+ + +S+ AHPK D TT +     ++ +  PHL + +F+  G K +DV 
Sbjct:   256 DLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVE 315

Query:   125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
             I ++  PT IHDFAIT+ F +  + Q+    + ++ G G P ++V EK+ R G++ K   
Sbjct:   316 I-TLPEPTMIHDFAITENFVVIPDQQMVFKLSEMIRG-GSPVIYVKEKMARFGVLSKQDL 373

Query:   185 SDAEMKWFNVPGFNAMHVFNAWEN----GDDEIVLMATTATSIENLFHKI-DMVHFSLEK 239
             + +++ W +VP     H++NAWE     GD  IV++ +  +  + +F +  +     L +
Sbjct:   374 TGSDINWVDVPDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDTIFSESGEPTRVELSE 433

Query:   240 VRINLRTGHVFRNILSTR-NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKE 298
             +R+N+RT    R ++ T  NLE G IN SY+G+K+++V++ +    PK  G+ K+D++  
Sbjct:   434 IRLNMRTKESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADPWPKCSGIAKVDIQNG 493

Query:   299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
               VS   YGPS FGGEP FVP  E      +ED G+V+ ++ DE  +ES+F+V+DA
Sbjct:   494 T-VSEFNYGPSRFGGEPCFVPEGE-----GEEDKGYVMGFVRDEEKDESEFVVVDA 543

GO:0009507 "chloroplast" evidence=ISM

GO:0045549 "9-cis-epoxycarotenoid dioxygenase activity" evidence=IDA;TAS

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009688 "abscisic acid biosynthetic process" evidence=RCA;TAS

GO:0009639 "response to red or far red light" evidence=IEP

GO:0010114 "response to red light" evidence=IEP

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

TAIR|locus:2091652 NCED3 "nine-cis-epoxycarotenoid dioxygenase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 123/359 (34%), Positives = 203/359 (56%)

Query:     5 IYGIADIIQCVAAVARVLMGHINLKKGFGLANTXXXXXXXXXXXXGESDLPYIINSTREG 64
             ++G   I + +   AR   G ++   G G+AN              E DLPY +  T  G
Sbjct:   217 LHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNG 276

Query:    65 DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
             D++TVGR+DFD  L ++M AHPK D  + E FA  +  V  P+L +FRF  +G K  DV 
Sbjct:   277 DLKTVGRFDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVE 336

Query:   125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
             I  +++PT +HDFAIT+ F +  + Q+      ++ G G P V+   K+ R GI+ KYA 
Sbjct:   337 I-QLDQPTMMHDFAITENFVVVPDQQVVFKLPEMIRG-GSPVVYDKNKVARFGILDKYAE 394

Query:   185 SDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKIDM-VHFSLEKVRI 242
               + +KW + P     H++NAWE  + DE+V++ +  T  +++F++ D  +   L ++R+
Sbjct:   395 DSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPDSIFNESDENLKSVLSEIRL 454

Query:   243 NLRTGHVFRN-ILSTR----NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEK 297
             NL+TG   R  I+S      NLE G +N + +G+K ++ ++ + +  PK+ G  K+DL  
Sbjct:   455 NLKTGESTRRPIISNEDQQVNLEAGMVNRNMLGRKTKFAYLALAEPWPKVSGFAKVDLTT 514

Query:   298 EIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
               EV +  YG + +GGEPLF+P      E  +ED+G+++ ++HDE   +S+  +++A S
Sbjct:   515 G-EVKKHLYGDNRYGGEPLFLPG-----EGGEEDEGYILCFVHDEKTWKSELQIVNAVS 567

GO:0009507 "chloroplast" evidence=ISM

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0045549 "9-cis-epoxycarotenoid dioxygenase activity" evidence=ISS;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009688 "abscisic acid biosynthetic process" evidence=ISS

GO:0042538 "hyperosmotic salinity response" evidence=RCA;IMP

GO:0006970 "response to osmotic stress" evidence=IMP

GO:0009409 "response to cold" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

TAIR|locus:2032085 NCED9 "nine-cis-epoxycarotenoid dioxygenase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 122/354 (34%), Positives = 202/354 (57%)

Query:     5 IYGIADIIQCVAAVARVLMGHINLKKGFGLANTXXXXXXXXXXXXGESDLPYIINSTREG 64
             ++G   I + +    R L G ++   G G+AN              E DLPY +  T+ G
Sbjct:   277 LHGHLGIAKLMLFNTRGLFGLVDPTGGLGVANAGLVYFNGHLLAMSEDDLPYHVKVTQTG 336

Query:    65 DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
             D+ET GR+DFD  L ++M AHPK D  T+E FA  +  V  P+L +FRF ++G K  DV 
Sbjct:   337 DLETSGRYDFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVE 396

Query:   125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
             I  +++PT IHDFAIT+ F +  + Q+      ++ G G P V+  +K  R GI+ K A 
Sbjct:   397 I-PLDQPTMIHDFAITENFVVIPDQQVVFRLPEMIRG-GSPVVYDEKKKSRFGILNKNAK 454

Query:   185 SDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHKIDMVHFS-LEKVRI 242
               + ++W  VP     H++N+WE  + DE+V++ +  T  +++F++ D    S L ++R+
Sbjct:   455 DASSIQWIEVPDCFCFHLWNSWEEPETDEVVVIGSCMTPPDSIFNEHDETLQSVLSEIRL 514

Query:   243 NLRTGHVFRN-ILSTR-NLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIE 300
             NL+TG   R  ++S + NLE G +N + +G+K RY ++ + +  PK+ G  K+DL    E
Sbjct:   515 NLKTGESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSGFAKVDLSTG-E 573

Query:   301 VSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
             + +  YG   +GGEPLF+P  +      +ED G+++ ++HDE   +S+  +++A
Sbjct:   574 IRKYIYGEGKYGGEPLFLPSGD-----GEEDGGYIMVFVHDEEKVKSELQLINA 622

GO:0009507 "chloroplast" evidence=ISM

GO:0045549 "9-cis-epoxycarotenoid dioxygenase activity" evidence=IDA;TAS

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009688 "abscisic acid biosynthetic process" evidence=RCA;TAS

GO:0010162 "seed dormancy process" evidence=IGI;RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

TAIR|locus:2087418 CCD1 "carotenoid cleavage dioxygenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 119/369 (32%), Positives = 188/369 (50%)

Query:     2 LSGIYGIADI-IQCVAAVARVLMGHINLKKGFGLANTXXXXXXXXXXXXGESDLPYIINS 60
             L G +G+  + +Q +    ++L    +   G G ANT             E+D PY+I  
Sbjct:   142 LKGFFGLLMVNVQQLRTKLKIL----DNTYGNGTANTALVYHHGKLLALQEADKPYVIKV 197

Query:    61 TREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ 120
               +GD++T+G  D+D+ L  S TAHPK D  T E F F +S    P+LT+     +GI  
Sbjct:   198 LEDGDLQTLGIIDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHT-PPYLTYRVISKDGIMH 256

Query:   121 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIIL 180
               VPI +I+ P  +HDFAIT+ +AIF +  +      ++  K M   F P K  R G++ 
Sbjct:   257 DPVPI-TISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEKKMIYSFDPTKKARFGVLP 315

Query:   181 KYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATS--IENLFHKID--MVHFS 236
             +YA  +  ++WF +P     H  NAWE  +DE+VL+     +  ++ +  K+   + +F 
Sbjct:   316 RYAKDELMIRWFELPNCFIFHNANAWEE-EDEVVLITCRLENPDLDMVSGKVKEKLENFG 374

Query:   237 LE--KVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKID 294
              E  ++R N++TG   +  LS   ++   IN  Y GKK RYV+  +   I K+ G++K D
Sbjct:   375 NELYEMRFNMKTGSASQKKLSASAVDFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFD 434

Query:   295 LEKEIEVSRRFY--GPSCFGGEPLFVPRNEDHL-----EAADEDDGFVVTYIHDEIHEES 347
             L  E E  +R    G +  G   L   R          E A+EDDG+++ ++HDE   +S
Sbjct:   435 LHAEAETGKRMLEVGGNIKGIYDLGEGRYGSEAIYVPRETAEEDDGYLIFFVHDENTGKS 494

Query:   348 KFLVMDAKS 356
                V+DAK+
Sbjct:   495 CVTVIDAKT 503

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0016118 "carotenoid catabolic process" evidence=IDA

GO:0045549 "9-cis-epoxycarotenoid dioxygenase activity" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0016121 "carotene catabolic process" evidence=IMP

GO:0016124 "xanthophyll catabolic process" evidence=IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0044242 "cellular lipid catabolic process" evidence=RCA

UNIPROTKB|Q83CU2 CBU_1011 "Lignostilbene-alpha,beta-dioxygenase" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 205 (77.2 bits), Expect = 3.3e-14, P = 3.3e-14
 Identities = 87/330 (26%), Positives = 155/330 (46%)

Query:    51 ESDLPYIINSTREGDVETVGRWDFDEALFASMT-AHPKTDMTTKETFAFKFSPVFSPHLT 109
             E+ +P + +      +E +G  ++++ L  ++T AHP  D  TKE     +  VFS   T
Sbjct:    60 ETPMPIVFDPQT---LERMGVINYEDKLKGNLTTAHPHYDFETKE--GINYLTVFSAKST 114

Query:   110 --FFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTV 167
                +R   +   ++ +  + +  P ++H F +T+ + I +E    V+  N++L  G P +
Sbjct:   115 SQIYRVSHHSKTRELLGSIPVKEPGYMHSFGMTQNYVILAEYPFFVNPLNLLLN-GNPFI 173

Query:   168 ----FVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIV-LMATTATS 222
                 + P K      +L   T   + + +    F A H  NA+E  D  IV ++A   T 
Sbjct:   174 ENFNWKPNKGTHF-YLLDRKTG--KFQNYKTESFFAFHHVNAFEENDKVIVDIIAYPNTD 230

Query:   223 I-ENLFHKIDMVHFS----------LEKVRINLRTGHVFRNILSTRNLELGSINSSYIGK 271
             I ++L+  +D++H            L +  INL    V   +LS   +EL  IN      
Sbjct:   231 IIQSLY--LDVLHGETNKNIVSAGELRRYEINLLDSSVNYVVLSEEPIELPRINYFLSNT 288

Query:   272 KNRYVFM-GVG--KEIPK--MEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLE 326
             KN Y+F+ GVG  K  P   +  ++KID++++   ++ +    C+ GEP+FV        
Sbjct:   289 KN-YLFVYGVGSDKNDPNNFLNRLLKIDVQQK--ATKIWKETMCYPGEPVFVSLPN---- 341

Query:   327 AADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
             A  EDDG +++ + +     S  L++DA S
Sbjct:   342 AKKEDDGVILSVVLNAQKGNSFLLILDAVS 371

GO:0008152 "metabolic process" evidence=ISS

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=ISS

TIGR_CMR|CBU_1011 CBU_1011 "dioxygenase, putative" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 205 (77.2 bits), Expect = 3.3e-14, P = 3.3e-14
 Identities = 87/330 (26%), Positives = 155/330 (46%)

Query:    51 ESDLPYIINSTREGDVETVGRWDFDEALFASMT-AHPKTDMTTKETFAFKFSPVFSPHLT 109
             E+ +P + +      +E +G  ++++ L  ++T AHP  D  TKE     +  VFS   T
Sbjct:    60 ETPMPIVFDPQT---LERMGVINYEDKLKGNLTTAHPHYDFETKE--GINYLTVFSAKST 114

Query:   110 --FFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTV 167
                +R   +   ++ +  + +  P ++H F +T+ + I +E    V+  N++L  G P +
Sbjct:   115 SQIYRVSHHSKTRELLGSIPVKEPGYMHSFGMTQNYVILAEYPFFVNPLNLLLN-GNPFI 173

Query:   168 ----FVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIV-LMATTATS 222
                 + P K      +L   T   + + +    F A H  NA+E  D  IV ++A   T 
Sbjct:   174 ENFNWKPNKGTHF-YLLDRKTG--KFQNYKTESFFAFHHVNAFEENDKVIVDIIAYPNTD 230

Query:   223 I-ENLFHKIDMVHFS----------LEKVRINLRTGHVFRNILSTRNLELGSINSSYIGK 271
             I ++L+  +D++H            L +  INL    V   +LS   +EL  IN      
Sbjct:   231 IIQSLY--LDVLHGETNKNIVSAGELRRYEINLLDSSVNYVVLSEEPIELPRINYFLSNT 288

Query:   272 KNRYVFM-GVG--KEIPK--MEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLE 326
             KN Y+F+ GVG  K  P   +  ++KID++++   ++ +    C+ GEP+FV        
Sbjct:   289 KN-YLFVYGVGSDKNDPNNFLNRLLKIDVQQK--ATKIWKETMCYPGEPVFVSLPN---- 341

Query:   327 AADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
             A  EDDG +++ + +     S  L++DA S
Sbjct:   342 AKKEDDGVILSVVLNAQKGNSFLLILDAVS 371

GO:0008152 "metabolic process" evidence=ISS

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=ISS

TAIR|locus:2134093 CCD8 "carotenoid cleavage dioxygenase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
 Identities = 41/164 (25%), Positives = 76/164 (46%)

Query:    66 VETVGRWDFDEALFASM--TAHPKTDMTTKETFAFKFSP-VFSPHLTFFRFDANGIKQKD 122
             +ET+G++++D+ L   M  +AHP   + T ET  +   P +  P     R +A   K++ 
Sbjct:   233 LETIGKFEYDDVLSDHMIQSAHP---IVT-ETEMWTLIPDLVKPGYRVVRMEAGSNKREV 288

Query:   123 VPILSINR----PTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGI 178
             V  +        P ++H FA+T+ + +  E  L  S  N++  +  P ++  E  P+ G 
Sbjct:   289 VGRVRCRSGSWGPGWVHSFAVTENYVVIPEMPLRYSVKNLLRAEPTP-LYKFEWCPQDGA 347

Query:   179 ---ILKYATSDAEMKWFNVPGFNAMHVFNAWE---NGDDEIVLM 216
                ++   T +       VP +   H  NA+E   NGD +  ++
Sbjct:   348 FIHVMSKLTGEVVAS-VEVPAYVTFHFINAYEEDKNGDGKATVI 390

GO:0009507 "chloroplast" evidence=ISM;RCA;NAS

GO:0009733 "response to auxin stimulus" evidence=IMP

GO:0010223 "secondary shoot formation" evidence=IGI;IMP

GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" evidence=ISS

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009850 "auxin metabolic process" evidence=IMP

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0016121 "carotene catabolic process" evidence=IDA

GO:0016124 "xanthophyll catabolic process" evidence=IDA

GO:0009926 "auxin polar transport" evidence=IMP

GO:0009830 "cell wall modification involved in abscission" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.14.99	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.1095.4.1	hypothetical protein (497 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00010285	xanthoxin dehydrogenase (EC-1.1.1.288) (281 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	358
PLN02258	590	PLN02258, PLN02258, 9-cis-epoxycarotenoid dioxygen	1e-99
pfam03055	469	pfam03055, RPE65, Retinal pigment epithelial membr	4e-95
PLN02491	545	PLN02491, PLN02491, carotenoid 9,10(9',10')-cleava	2e-61
COG3670	490	COG3670, COG3670, Lignostilbene-alpha,beta-dioxyge	3e-47
PLN02969	610	PLN02969, PLN02969, 9-cis-epoxycarotenoid dioxygen	2e-10

>gnl|CDD|215145 PLN02258, PLN02258, 9-cis-epoxycarotenoid dioxygenase NCED

 Score =  305 bits (784), Expect = 1e-99
 Identities = 134/343 (39%), Positives = 206/343 (60%), Gaps = 11/343 (3%)

Query: 19  ARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEAL 78
           AR L G ++  +G G+AN  L +F+ +LLA+ E DLPY +  T +GD+ETVGR+DFD  L
Sbjct: 223 ARGLFGLVDASRGTGVANAGLVYFNGRLLAMSEDDLPYQVRITGDGDLETVGRYDFDGQL 282

Query: 79  FASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFA 138
            +SM AHPK D  T E FA  +  V  P+L +FRF  +G K  DV I  +++PT +HDFA
Sbjct: 283 DSSMIAHPKVDPVTGELFALSYDVVKKPYLKYFRFSPDGEKSPDVEI-PLDQPTMMHDFA 341

Query: 139 ITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFN 198
           IT+ F +  + Q+ V   + M+  G P V+   K  R G++ K AT  +E++W  VP   
Sbjct: 342 ITENFVVIPDQQV-VFKLSEMIRGGSPVVYDKNKTSRFGVLPKNATDASEIQWVEVPDCF 400

Query: 199 AMHVFNAWENGD-DEIVLMATTATSIENLFHKIDMVHFS-LEKVRINLRTGHVFRNIL-- 254
             H++NAWE  + DE+V++ +  T  +++F++ D    S L ++R+NLRTG   R  +  
Sbjct: 401 CFHLWNAWEEPETDEVVVIGSCMTPPDSIFNESDESLRSVLSEIRLNLRTGESTRRPIIS 460

Query: 255 -STRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGG 313
               NLE G +N + +G+K RY ++ + +  PK+ G  K+DL    EV +  YG   +GG
Sbjct: 461 GEQVNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLSTG-EVKKYIYGEGRYGG 519

Query: 314 EPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
           EP FVPR      +  EDDG+++ ++HDE   +S+  V++A +
Sbjct: 520 EPFFVPRGSG---SEAEDDGYILAFVHDEEKGKSELQVVNAVN 559

Length = 590

>gnl|CDD|217340 pfam03055, RPE65, Retinal pigment epithelial membrane protein

 Score =  290 bits (745), Expect = 4e-95
 Identities = 122/359 (33%), Positives = 179/359 (49%), Gaps = 30/359 (8%)

Query: 19  ARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEAL 78
               +      K   +ANT++ +   +LLAL E+ LPY ++      +ET+GR+DF   L
Sbjct: 98  PCKNIFPRVPGKLKNVANTNVVYHGGRLLALWEAGLPYRLDP---ETLETLGRYDFGGKL 154

Query: 79  FAS--MTAHPKTDMTTKETFAFKFSPVF-SPHLTFFRFDANGIKQKDVPILSINRPTFIH 135
                 TAHPK D  T E   F  S     P+LT++  DA+G   ++VPI S+  P+ IH
Sbjct: 155 KPGPPFTAHPKVDPVTGELVNFGLSLGPKPPYLTYYEVDADGKLVREVPIFSLPGPSMIH 214

Query: 136 DFAITKRFAIFSETQLAVSAANVMLGKGMPTV-FVPEKIPRIGIILKYATSDAEMKWFNV 194
           DFAIT+ + IF +  L      ++LG     + + PEK  R G+I +     ++++WF  
Sbjct: 215 DFAITENYVIFPDLPLVFDPLRLLLGGRADPLRWDPEKPTRFGVIPRR-GGKSDVRWFEA 273

Query: 195 PGFNAMHVFNAWENGDDEIVLMATTATSIENLFH-----------KIDMVHFSLEKVRIN 243
           P     H  NAWE G  EIVL A      + L                     L + R++
Sbjct: 274 PPCFVFHTANAWEEG-GEIVLDACRYDDPDFLDPFYLDNLRPDAFADKKPRSRLTRWRLD 332

Query: 244 LRTGHVF-RNILSTRNLELGSINSSYIGKKNRYVFMGV----GKEIPKMEGVVKIDLEKE 298
           L+TG      +L  R  E   IN  Y+G+K RYV+M             +G+VK+DLE  
Sbjct: 333 LKTGGDVTEEVLLDRPCEFPRINPRYVGRKYRYVYMAAADPRPPGSGPFDGLVKVDLETG 392

Query: 299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSP 357
            EV    +GP C+ GEP+FVPR      AADEDDG++++ ++DE    S+ L++DAK  
Sbjct: 393 -EVQVWSFGPGCYPGEPIFVPRP----GAADEDDGWLLSVVYDEDTGRSELLILDAKDL 446

This family represents a retinal pigment epithelial membrane receptor which is abundantly expressed in retinal pigment epithelium, and binds plasma retinal binding protein. The family also includes the sequence related neoxanthin cleavage enzyme in plants and lignostilbene-alpha,beta-dioxygenase in bacteria. Length = 469

>gnl|CDD|215271 PLN02491, PLN02491, carotenoid 9,10(9',10')-cleavage dioxygenase

 Score =  205 bits (523), Expect = 2e-61
 Identities = 127/379 (33%), Positives = 198/379 (52%), Gaps = 38/379 (10%)

Query: 2   LSGIYGIADI-IQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINS 60
           L G++G+  + +Q + A  +VL    +   G G  NT+L +   KLLAL E+D PY++  
Sbjct: 146 LKGLFGLLMVNMQQLRAKLKVL----DFSYGNGTGNTALIYHHGKLLALSEADKPYVVKV 201

Query: 61  TREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQ 120
             +GD++T+G  D+D+ L  S TAHPK D  T E F F +S    P++T+     +G   
Sbjct: 202 LEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTGEMFTFGYSHE-PPYITYRVISKDGAMH 260

Query: 121 KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIIL 180
             VPI +I+ P  +HDFAIT+ +AIF +  L      ++  K     F   K  R G++ 
Sbjct: 261 DPVPI-TISEPIMMHDFAITENYAIFMDLPLYFRPKEMVKEKKFIYTFDATKKARFGVLP 319

Query: 181 KYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMV------- 233
           +YA  +  ++WF +P     H  NAWE   DE+VL+      +EN    +DMV       
Sbjct: 320 RYAKDELMIRWFELPNCFIFHNANAWEEE-DEVVLI---TCRLEN--PDLDMVNGKVKEK 373

Query: 234 --HF--SLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEG 289
             +F   L ++R N++TG   +  LS   ++   +N SY G+K RYV+  +   I K+ G
Sbjct: 374 LENFGNELYEMRFNMKTGAASQKKLSASAVDFPRVNESYTGRKQRYVYGTILDSIAKVTG 433

Query: 290 VVKIDLEKEIEVSRRF------------YGPSCFGGEPLFVPRNEDHLEAADEDDGFVVT 337
           ++K DL  E E  ++              GP  FG E +FVPR       ++EDDG+++ 
Sbjct: 434 IIKFDLHAEPETGKKKLEVGGNVKGIFDLGPGRFGSEAIFVPREPG--TTSEEDDGYLIF 491

Query: 338 YIHDEIHEESKFLVMDAKS 356
           ++HDE   +S   V+DAK+
Sbjct: 492 FVHDENTGKSSVNVIDAKT 510

Length = 545

>gnl|CDD|226196 COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  166 bits (423), Expect = 3e-47
 Identities = 105/344 (30%), Positives = 162/344 (47%), Gaps = 37/344 (10%)

Query: 35  ANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFAS-MTAHPKTDMTTK 93
           ANTS+     +LLAL E   PY ++      +ET+G+ DF         +AHPK D  T 
Sbjct: 136 ANTSVIMHGDELLALWEGGSPYRLDPD---TLETLGKEDFGGDPLGGPFSAHPKVDPDTG 192

Query: 94  ETFAFKFSPVFSPHLTFFRFDANG--IKQKDVPILSINRPTFIHDFAITKRFAIFSETQL 151
           E F F +S    P+LT++  DA+G   +  D+P+     P  +HDFAIT+ + IF    L
Sbjct: 193 ELFNFGYSFAL-PYLTYYVVDADGELRRTVDIPL---PGPPMMHDFAITENYLIF--FDL 246

Query: 152 AVSAANVMLGKGMPT-----VFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAW 206
            V+   V    G P       + PE   RI ++ +    D+E++WF        H  NA+
Sbjct: 247 PVTFDPVPRLLGRPADGHAMRWRPELPTRILVLPREG--DSEIRWFEAEPGFVFHFLNAY 304

Query: 207 ENGDDEIVLMA----TTATSIENL--FHKIDMVHF---SLEKVRINLRTGHVFRNILSTR 257
           E GD+ +++        + +++ L      D        L +  +NL+TG V    L  R
Sbjct: 305 EEGDEVVLVDFLRYDDFSQTLDTLGEGPGGDFRTLAPPRLHRWTLNLKTGKVAEEQLDDR 364

Query: 258 NLELGSINSSYIGKKNRYVFMGVGK-EIPKMEG---VVKIDLEKEIEVSRRFYGPSCFGG 313
             E   IN  Y+G+  RY +M   +      +G   + K DLE         +GP  +G 
Sbjct: 365 ACEFPRINPRYVGQPYRYTYMSGARPGTFLFQGLQTLAKHDLETG-TSQVYSFGPRGYGS 423

Query: 314 EPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSP 357
           EP+FVPR      ++ EDDG+++T ++D     S+ LV DA+  
Sbjct: 424 EPVFVPR----PGSSAEDDGWLLTLVYDGDRHASELLVFDAQRV 463

Length = 490

>gnl|CDD|215523 PLN02969, PLN02969, 9-cis-epoxycarotenoid dioxygenase

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 102/422 (24%), Positives = 161/422 (38%), Gaps = 107/422 (25%)

Query: 27  NLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGR--------------- 71
           N+K    +ANTS+  +  +LL L E   PY I+S   G +ET+GR               
Sbjct: 172 NVKVMKNVANTSVLKWGGRLLCLWEGGEPYEIDS---GTLETIGRFDLAPDDDSSKDDRL 228

Query: 72  -----WDFDEALF------------ASMTAHPKTDMTTKE--TFAFKFSPVFSP--HLTF 110
                WD    L               + +H K D               +  P  + TF
Sbjct: 229 QGSDAWDLAARLLKPILTGVFKMPKKRLLSHYKIDGRRNRLLVVTCNAEDMLLPRSNFTF 288

Query: 111 FRFDANG--IKQKDVPILSINRPTFIHDFAIT-KRFAIFSE--------TQLAVSAANVM 159
           + FDA+   +++K+     ++    IHD+A T   + + +         + LA++  + M
Sbjct: 289 YEFDADFKLVQRKE---FKLDDHLMIHDWAFTDTHYVLLANRVKLDVPGSLLAMAGLSPM 345

Query: 160 LGKGMPTVFVPEKIPRIGIILKYATSDAEM---KW---FNVPG-FNAMHVFNAWE----N 208
           +      + V    P   + L     + E     W     VP     +HV NA+E     
Sbjct: 346 IS----ALAVDPSRPSSPVYLLPRFPEKEAGGRDWRVPVEVPSQLWLIHVGNAYEERDDR 401

Query: 209 GDDEIVLMATTAT----SIENLF------HKID------------MVHFSLEKVRINL-R 245
           G+  I L A+  +    S   +F       K+D            + H  L +V I+L R
Sbjct: 402 GNLRIQLHASACSYQWFSFHRMFGYDWQNKKLDPSVMNNAKGKELLPH--LVQVSIDLDR 459

Query: 246 TGHVFR---NILST---RNLELGSINSSYIGKKNRYVFM----GVGKEIPK--MEGVVKI 293
           TG         LS    +  +   IN S+ G+KN Y +     G  K +P    + VVK+
Sbjct: 460 TGDCRSCDVEPLSNQWEKPADFPVINPSFSGQKNEYTYAAAASGSRKTLPHFPFDSVVKL 519

Query: 294 DLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMD 353
           D+           G   F GEP+FVPR        +EDDG+V+   +    E    +++D
Sbjct: 520 DVPDG-SARSWSTGARRFVGEPVFVPRKSSQ-GGGEEDDGYVLVVEYAVSDERCYLVILD 577

Query: 354 AK 355
           AK
Sbjct: 578 AK 579

Length = 610

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	358
PLN02258	590	9-cis-epoxycarotenoid dioxygenase NCED	100.0
PLN02491	545	carotenoid 9,10(9',10')-cleavage dioxygenase	100.0
COG3670	490	Lignostilbene-alpha,beta-dioxygenase and related e	100.0
PF03055	486	RPE65: Retinal pigment epithelial membrane protein	100.0
PLN02969	610	9-cis-epoxycarotenoid dioxygenase	100.0
KOG1285	582	consensus Beta, beta-carotene 15,15'-dioxygenase a	100.0
KOG1285	582	consensus Beta, beta-carotene 15,15'-dioxygenase a	99.87

>PLN02258 9-cis-epoxycarotenoid dioxygenase NCED

Probab=100.00  E-value=7.1e-90  Score=700.46  Aligned_cols=351  Identities=37%  Similarity=0.713  Sum_probs=321.2

Q ss_pred             CCCCCChhHHHHHHHHHHHHhcCcccCCCCcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCceeeeecccccccccC
Q 046348            2 LSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFAS   81 (358)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~~~~l~~~   81 (358)
                      +|+++|.+|++++.+...|.++|.++..+.+|+|||||++|+||||||||+|.||+++++|+.||||+|++||+|+|..+
T Consensus       206 ~g~~~~~~g~~r~~~~~~r~~~~~~d~~~~~~~ANT~vv~~~grLlAL~E~g~Py~l~~d~~~TLeT~G~~df~g~l~~~  285 (590)
T PLN02258        206 IGELHGHSGIARLMLFYARGLFGLVDASRGTGVANAGLVYFNGRLLAMSEDDLPYQVRITGDGDLETVGRYDFDGQLDSS  285 (590)
T ss_pred             cccccccccccccchhhccccccccccccccCCCceeEEEECCEEEEEEcCCCceEecCCCCCCcccCcccccCCccCcc
Confidence            57788889999999999999999998888999999999999999999999999999998876799999999999999888


Q ss_pred             CCCCceeeCCCCcEEEEEecCCCCCcEEEEEEcCCCCeEEeEeeecCCCcceeeceecCCCEeEEEeCccccCHHHHHcC
Q 046348           82 MTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLG  161 (358)
Q Consensus        82 ~tAHP~~Dp~tg~~~~~g~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~~  161 (358)
                      ||||||+||.|||+++|+|+....++++|+++|++|++.+.+++ +++.++|||||+|||||+||+++|+.+++.+|+ .
T Consensus       286 ftAHPKvDP~TGel~~f~y~~~~~p~l~~~~~d~~G~~~~~~~i-~lp~p~~~HDFaiTenY~Vf~d~Pl~~~~~~~~-~  363 (590)
T PLN02258        286 MIAHPKVDPVTGELFALSYDVVKKPYLKYFRFSPDGEKSPDVEI-PLDQPTMMHDFAITENFVVIPDQQVVFKLSEMI-R  363 (590)
T ss_pred             cccCceEcCCCCeEEEEEEeccCCCcEEEEEECCCCCEEeeEEe-eCCCCccccceeccCceEEEEccCceEcHHHHh-h
Confidence            99999999999999999999876789999999999999999988 999999999999999999999999999999997 4


Q ss_pred             CCCCeeecCCCCcEEEEEeCCCCCCCceEEEEcCCeeeeeecceeecC-CCeEEEEEeecCChhhhhccc-ccccceEEE
Q 046348          162 KGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENG-DDEIVLMATTATSIENLFHKI-DMVHFSLEK  239 (358)
Q Consensus       162 ~~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~~~fH~~NA~E~~-~~~iv~D~~~~~~~~~~~~~~-~~~~~~l~R  239 (358)
                      +++++.|++++++||+||||++++.+.++||++|+||+||++||||++ +++||+|.|++.+.+.++... ...+++|+|
T Consensus       364 g~~~~~~d~~~~srfgVipR~~~~~~~irwfe~p~~f~fH~~NA~Ee~~~~~VVvd~~~~~~~~~~~~~~~~~~~~~L~r  443 (590)
T PLN02258        364 GGSPVVYDKNKTSRFGVLPKNATDASEIQWVEVPDCFCFHLWNAWEEPETDEVVVIGSCMTPPDSIFNESDESLRSVLSE  443 (590)
T ss_pred             CCCceEECCCCCcEEEEEECCCCCCCceEEEecCCcEEEecccccccCCCCeEEEEEecccChhhhcccccccccceEEE
Confidence            568999999999999999999765568999999999999999999974 367999999998766544332 356789999


Q ss_pred             EEEeCCCCceEEEeecc---CCccccccCCCCCCCcCceEEEeeccCCCCCCeEEEEecCCCeEEEEEEcCCCccCCCcE
Q 046348          240 VRINLRTGHVFRNILST---RNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPL  316 (358)
Q Consensus       240 ~~idl~~g~v~~~~L~~---~~~EfP~In~~~~gk~yry~y~~~~~~~~~~~~lvk~D~~~g~~~~~~~~~~~~~~~EPv  316 (358)
                      ||||+++|+++++.|.+   .++|||+||+++.||+|||+|+++.++...+++|+|+|+++|+ .+.||+|+++|+|||+
T Consensus       444 ~ridl~tg~~~~~~l~~~~~~~~EFP~In~~~~Grk~Ry~Y~~~~~~~~~~~givK~Dl~tg~-~~~~~~g~g~~~gEPv  522 (590)
T PLN02258        444 IRLNLRTGESTRRPIISGEQVNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLSTGE-VKKYIYGEGRYGGEPF  522 (590)
T ss_pred             EEEECCCCceeeeEeecCCCcccccceECHHHCCCccceEEEeccCCCCCCCeEEEEECCCCc-EEEEECCCCccccCCE
Confidence            99999999998887755   7999999999999999999999888777789999999999998 7899999999999999


Q ss_pred             EeecCCCCCCCCCCCCeEEEEEEEeCCCCeeEEEEEeCCCCC
Q 046348          317 FVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI  358 (358)
Q Consensus       317 FVPrp~~~~~~~~EDDG~lls~v~d~~~~~s~l~ILDA~~l~  358 (358)
                      ||||++++   .+|||||||++|+|..+++|+|+||||++|+
T Consensus       523 FVPr~~~~---~~EDDGylls~V~d~~~~~SeL~IlDA~~l~  561 (590)
T PLN02258        523 FVPRGSGS---EAEDDGYILAFVHDEEKGKSELQVVNAVNLE  561 (590)
T ss_pred             eccCCCCC---cccCCcEEEEEEEECCCCceEEEEEeCCCCc
Confidence            99999642   3599999999999999999999999999984

>PLN02491 carotenoid 9,10(9',10')-cleavage dioxygenase

Probab=100.00  E-value=4.6e-88  Score=685.39  Aligned_cols=352  Identities=33%  Similarity=0.582  Sum_probs=314.9

Q ss_pred             CCCCCChhHHHHHHHHHHHHhcCcccCCCCcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCceeeeecccccccccC
Q 046348            2 LSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFAS   81 (358)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~~~~l~~~   81 (358)
                      +++++|+.|+++..+...|.+++..+....+|+|||||++|+||||||||+|.||++++.|++||||+|++||+|+|..+
T Consensus       143 ~~~~~g~~g~~~~~~~~~r~~~~~~~~~~~~~~ANT~vi~~~grLlAl~E~g~Py~l~~~Dp~tLeT~G~~df~g~l~~~  222 (545)
T PLN02491        143 IGDLKGLFGLLMVNMQQLRAKLKVLDFSYGNGTGNTALIYHHGKLLALSEADKPYVVKVLEDGDLQTLGLLDYDKRLKHS  222 (545)
T ss_pred             cccccccchhhhhhhhhhhccccccccccCCCCCceeEEEECCEEEEEEcCCCCeEecCCCCCCcceeeecccCCccCcc
Confidence            57889999999999999998888776666689999999999999999999999999987445799999999999999989


Q ss_pred             CCCCceeeCCCCcEEEEEecCCCCCcEEEEEEcCCCCeEEeEeeecCCCcceeeceecCCCEeEEEeCccccCHHHHHcC
Q 046348           82 MTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLG  161 (358)
Q Consensus        82 ~tAHP~~Dp~tg~~~~~g~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~~  161 (358)
                      ||||||+||.||||++||++.. .++++|+++|++|++.+.+++ +++.++|||||+|||||+||+++|+.+++.+|+++
T Consensus       223 ~TAHPk~DP~TGel~~fgy~~~-~p~~~y~~~~~~G~~~~~v~i-~l~~~~~~HDFaiTeny~Vf~~~Pl~~~~~~~~~~  300 (545)
T PLN02491        223 FTAHPKVDPFTGEMFTFGYSHE-PPYITYRVISKDGAMHDPVPI-TISEPIMMHDFAITENYAIFMDLPLYFRPKEMVKE  300 (545)
T ss_pred             cccCccCcCCCCCEEEEEecCC-CCcEEEEEECCCCcCcceeEe-ecCCCceeeeeEecCCEEEEEECCcccCHHHHhhC
Confidence            9999999999999999999984 488999999999999988888 99999999999999999999999999999999877


Q ss_pred             CCCCeeecCCCCcEEEEEeCCCCCCCceEEEEcCCeeeeeecceeecCCCeEEEEEeecCChhh-----hh-cccccccc
Q 046348          162 KGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIEN-----LF-HKIDMVHF  235 (358)
Q Consensus       162 ~~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~~~fH~~NA~E~~~~~iv~D~~~~~~~~~-----~~-~~~~~~~~  235 (358)
                      +..++.|+|++++||+||||++++.+.++||++|+||+||++||||++ ++||+|+|++++.+.     .+ +......+
T Consensus       301 ~~~~~~~d~~~~~r~gVipR~~~~~~~irw~e~~~~f~fH~~NA~Ee~-~~Ivvd~~~~~~~~~~~~~~~~~~~~~~~~~  379 (545)
T PLN02491        301 KKFIYTFDATKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEE-DEVVLITCRLENPDLDMVNGKVKEKLENFGN  379 (545)
T ss_pred             CCceeEECCCCCcEEEEEECCCCCCCceEEEEcCCceEeecCCccccC-CeEEEEEeccCCCccccccccccccccccCc
Confidence            778999999999999999998755568999999999999999999988 899999999987531     11 11223467


Q ss_pred             eEEEEEEeCCCCceEEEeeccCCccccccCCCCCCCcCceEEEeeccCCCCCCeEEEEecCC----CeE--------EEE
Q 046348          236 SLEKVRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEK----EIE--------VSR  303 (358)
Q Consensus       236 ~l~R~~idl~~g~v~~~~L~~~~~EfP~In~~~~gk~yry~y~~~~~~~~~~~~lvk~D~~~----g~~--------~~~  303 (358)
                      +|+|||||+.+|+++++.|++.++|||+||+++.||+|||+|++..++...+++|+|+|+++    |+.        +..
T Consensus       380 ~l~r~ridl~tg~~~~~~l~~~~~EfP~In~~~~Grk~ry~Y~~~~~~~~~~~gl~K~D~~t~~~~g~~~~~~~~~~~~~  459 (545)
T PLN02491        380 ELYEMRFNMKTGAASQKKLSASAVDFPRVNESYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPETGKKKLEVGGNVKGI  459 (545)
T ss_pred             eEEEEEEECCCCceeeeccCCcccccCccCHHHCCCcccEEEEeccCCccCcCeEEEEEecccccCCccccccccceeEE
Confidence            89999999999999999999999999999999999999999999887666789999999985    431        247


Q ss_pred             EEcCCCccCCCcEEeecCCCCCCCCCCCCeEEEEEEEeCCCCeeEEEEEeCCCCC
Q 046348          304 RFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI  358 (358)
Q Consensus       304 ~~~~~~~~~~EPvFVPrp~~~~~~~~EDDG~lls~v~d~~~~~s~l~ILDA~~l~  358 (358)
                      ||+++++|+|||+||||+++.  +.+|||||||++|+|..+++|+|+||||++|+
T Consensus       460 ~~~g~~~~~~EPvFVPr~~~~--~~~EDDG~ll~~V~d~~~~~S~l~VlDAk~~~  512 (545)
T PLN02491        460 FDLGPGRFGSEAIFVPREPGT--TSEEDDGYLIFFVHDENTGKSSVNVIDAKTMS  512 (545)
T ss_pred             EEcCCCccccCCEEecCCCCC--CcccCCcEEEEEEEcCCCCcceEEEEeCCCCC
Confidence            899999999999999997431  15899999999999999999999999999985

>COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=8.6e-84  Score=618.44  Aligned_cols=317  Identities=32%  Similarity=0.539  Sum_probs=285.9

Q ss_pred             CCcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCceeeeeccccc-ccccCCCCCceeeCCCCcEEEEEecCCCCCcE
Q 046348           30 KGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDE-ALFASMTAHPKTDMTTKETFAFKFSPVFSPHL  108 (358)
Q Consensus        30 ~~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~~~-~l~~~~tAHP~~Dp~tg~~~~~g~~~~~~~~~  108 (358)
                      ..+|.|||||+.|+++|+||||+|.||+|||+   ||+|+|..+|+| .+..+||||||+||.|||++|||+++.. +++
T Consensus       131 ~lkn~aNTsVi~~~~~LlalwEgG~pyrLdp~---tL~TlG~~~~~g~~~g~~fsAHPkvDp~tgel~~fg~s~~~-~~l  206 (490)
T COG3670         131 DLKNAANTSVIMHGDELLALWEGGSPYRLDPD---TLETLGKEDFGGDPLGGPFSAHPKVDPDTGELFNFGYSFAL-PYL  206 (490)
T ss_pred             ccccCCccceEeehhHHHHHHhcCCccccChh---HhhhcChhhcCCCCCCCccccCccCCCCCceEEEEEeccCC-Cee
Confidence            35999999999999999999999999999986   999999999998 4556799999999999999999999976 499


Q ss_pred             EEEEEcCCCCeEEeEeeecCCCcceeeceecCCCEeEEEeCccccCHHHHHcC---CCCCeeecCCCCcEEEEEeCCCCC
Q 046348          109 TFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLG---KGMPTVFVPEKIPRIGIILKYATS  185 (358)
Q Consensus       109 ~~~~~d~~g~~~~~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~~---~~~~~~w~~~~~t~~~vipR~~~~  185 (358)
                      +|+++|++|++++.+.+ ++|+++|||||++|+||+||+++|+.+|+...+++   ...++.|+|+.||||+||||.+ +
T Consensus       207 ~~~~v~~~G~l~r~~~i-~lpg~~~~HDFa~T~~y~If~~~Pv~~d~~p~ll~~~~~~~~~~~~pe~ptri~V~pR~g-~  284 (490)
T COG3670         207 TYYVVDADGELRRTVDI-PLPGPPMMHDFAITENYLIFFDLPVTFDPVPRLLGRPADGHAMRWRPELPTRILVLPREG-D  284 (490)
T ss_pred             EEEEECCCCcEEEeeee-ecCCCccceeeeecCceEEEEeCcccccchhHHhcCcccccceeecCCCCcEEEEEccCC-C
Confidence            99999999999999999 99999999999999999999999999996443333   4679999999999999999986 3


Q ss_pred             CCceEEEEcCCeeeeeecceeecCCCeEEEEEeecCChhhhhcc--------c-ccccceEEEEEEeCCCCceEEEeecc
Q 046348          186 DAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHK--------I-DMVHFSLEKVRINLRTGHVFRNILST  256 (358)
Q Consensus       186 ~~~v~~~~~~~~~~fH~~NA~E~~~~~iv~D~~~~~~~~~~~~~--------~-~~~~~~l~R~~idl~~g~v~~~~L~~  256 (358)
                       +++||||+|+||+||+.||||++|+.|.+|.|++++.....+.        . ...+++|+||+|+|++|++..+.+.+
T Consensus       285 -~~irwfE~~p~fvfH~~NAye~~d~~v~~d~~~~~~~~~~~~~~~~~~~g~~~~~a~~~L~R~~lnl~tg~v~~~~~~~  363 (490)
T COG3670         285 -SEIRWFEAEPGFVFHFLNAYEEGDEVVLVDFLRYDDFSQTLDTLGEGPGGDFRTLAPPRLHRWTLNLKTGKVAEEQLDD  363 (490)
T ss_pred             -CceeEEecCCeEEEEecceeecCCCcEEEEEEeecccccccccccccccccccccCCCcceEEEEccccchhHHHhhhh
Confidence             6899999999999999999999889999999999986422211        1 12368999999999999999999999


Q ss_pred             CCccccccCCCCCCCcCceEEEeeccC-CCCCCe---EEEEecCCCeEEEEEEcCCCccCCCcEEeecCCCCCCCCCCCC
Q 046348          257 RNLELGSINSSYIGKKNRYVFMGVGKE-IPKMEG---VVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDD  332 (358)
Q Consensus       257 ~~~EfP~In~~~~gk~yry~y~~~~~~-~~~~~~---lvk~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~~~~~~~~EDD  332 (358)
                      +.+|||+||+++.|++|||.|++...+ ...+++   |+|+|++||+ .+.+.+++++|+|||+|||||++    ..|||
T Consensus       364 r~~EFP~in~~~~G~p~RY~Y~~~~rp~~~l~~g~~~l~k~D~~tg~-~~~~~~g~~~y~~E~vfvPrpg~----~~EdD  438 (490)
T COG3670         364 RACEFPRINPRYVGQPYRYTYMSGARPGTFLFQGLQTLAKHDLETGT-SQVYSFGPRGYGSEPVFVPRPGS----SAEDD  438 (490)
T ss_pred             hhcccCccChhhcCCceEEEEEecccCCccchhhcceeEEEeccCCc-EEEEecCCCCcccccccccCCCC----CcCCC
Confidence            999999999999999999999998774 334445   9999999999 89999999999999999999965    89999


Q ss_pred             eEEEEEEEeCCCCeeEEEEEeCCCCC
Q 046348          333 GFVVTYIHDEIHEESKFLVMDAKSPI  358 (358)
Q Consensus       333 G~lls~v~d~~~~~s~l~ILDA~~l~  358 (358)
                      ||||++|||.+.++|+|+||||++++
T Consensus       439 GwLl~~vyd~~~~~Sel~v~DA~~~~  464 (490)
T COG3670         439 GWLLTLVYDGDRHASELLVFDAQRVT  464 (490)
T ss_pred             cEEEEEEEecCCCcceEEEEecccCC
Confidence            99999999999999999999999863

>PF03055 RPE65: Retinal pigment epithelial membrane protein; InterPro: IPR004294 Carotenoids such as beta-carotene, lycopene, lutein and beta-cryptoxanthine are produced in plants and certain bacteria, algae and fungi, where they function as accessory photosynthetic pigments and as scavengers of oxygen radicals for photoprotection

Probab=100.00  E-value=2.5e-80  Score=626.89  Aligned_cols=321  Identities=36%  Similarity=0.567  Sum_probs=257.0

Q ss_pred             CCCcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCceeeeecccccccc-cCCCCCceeeCCCCcEEEEEecCCC--C
Q 046348           29 KKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALF-ASMTAHPKTDMTTKETFAFKFSPVF--S  105 (358)
Q Consensus        29 ~~~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~~~~l~-~~~tAHP~~Dp~tg~~~~~g~~~~~--~  105 (358)
                      ...+|+|||||++|+||||||||+|.||+|||+   ||||+|.++|++.|+ ..||||||+||+||++|+|+++++.  .
T Consensus       116 ~~~~~~aNt~v~~~~g~llAl~E~g~p~~lDp~---TLeT~g~~~~~~~l~~~~~tAHp~~Dp~tg~l~~~~~~~~~~~~  192 (486)
T PF03055_consen  116 GKPKNNANTNVIPHGGRLLALWEGGPPYELDPD---TLETLGPFDFDGKLPGQPFTAHPKIDPETGELYNFGYSLGPEGS  192 (486)
T ss_dssp             GGB-----SEEEEETTEEEEE-TTSEEEEEETT---TCEEEEEEEGGGTSSTS---S--EEETTTTTEEEEEEECSSTTS
T ss_pred             ccCCCCceeeeEEECCEEEEEEcCCCCEEechh---HhhhcCcccccccccCcccccCceEcccCCcEEEEEEEeccCCC
Confidence            357999999999999999999999999999985   999999999999998 6799999999999999999999765  5


Q ss_pred             CcEEEEEEcCCCCeEEeEeeecCCCcceeeceecCCCEeEEEeCccccCHHHHHcCCC--CCeeecCCCCcEEEEEeCCC
Q 046348          106 PHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKG--MPTVFVPEKIPRIGIILKYA  183 (358)
Q Consensus       106 ~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~~~~--~~~~w~~~~~t~~~vipR~~  183 (358)
                      ++++++++|++|++++.++.++++.++|||||+|||||+||+++|+.+++.+++++..  +++.|+|+++++|+||||++
T Consensus       193 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~iHdf~vT~~Y~V~~~~P~~~~~~~~~~g~~~~~~~~~~p~~~t~~~VipR~~  272 (486)
T PF03055_consen  193 PKLTVYEIDPDGKKIHRVPSFPLPRPSYIHDFAVTENYVVFPDNPLRFDPERLLLGGSPIDCLKWDPERPTRFHVIPRDG  272 (486)
T ss_dssp             EEEEEEEE-TTSEEEEEEEESCCCS-B-----EE-SSEEEEEE-SEEE-HHHHHTTCCTGGCEEE-TTS-EEEEEEETTT
T ss_pred             CcEEEEEEcCccceeEEeeeccCCCCcccccccccCceEEEEECCeEECHHHHhhCCcccceEEECCCCCeEEEEEECcC
Confidence            8999999999998777777668999999999999999999999999999999985542  79999999999999999997


Q ss_pred             CCCCceEEEEcCCeeeeeecceeecCCC--eEEEEEeecCChhhhhc----c--------cccccceEEEEEEeCC--CC
Q 046348          184 TSDAEMKWFNVPGFNAMHVFNAWENGDD--EIVLMATTATSIENLFH----K--------IDMVHFSLEKVRINLR--TG  247 (358)
Q Consensus       184 ~~~~~v~~~~~~~~~~fH~~NA~E~~~~--~iv~D~~~~~~~~~~~~----~--------~~~~~~~l~R~~idl~--~g  247 (358)
                      ++ ..++||++|+||+||++||||++|+  +|++|+|+|++...+..    .        .....++|+||+||+.  ++
T Consensus       273 ~~-~~v~~~~~~~~~~~H~~NAyE~~dg~~~iv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~R~~idl~~~~~  351 (486)
T PF03055_consen  273 GK-SPVRWFEAPPFFVFHFVNAYEDDDGGGEIVLDACRYDDPEFLDSFYLDNLRPDGMDFNSDSPGRLRRYRIDLDSKTG  351 (486)
T ss_dssp             SC-CCEEEEEETTCEEEEEEEEEEETTT-TEEEEEEEEECSSS-CGCSCHHHHCC-HHHCCCS-EEEEEEEEEETT--TC
T ss_pred             CC-ceeEEEecCChhhccccceeecCCCceEEEEEEeecCCcccccccchhcccccccccccCCCceEEEEEEccccccc
Confidence            54 6799999999999999999999853  99999999998653321    1        1346789999999999  88


Q ss_pred             ceEEEeeccC-CccccccCCCCCCCcCceEEEeeccC----CCCCCeEEEEecCCCeEEEEEEcCCCccCCCcEEeecCC
Q 046348          248 HVFRNILSTR-NLELGSINSSYIGKKNRYVFMGVGKE----IPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNE  322 (358)
Q Consensus       248 ~v~~~~L~~~-~~EfP~In~~~~gk~yry~y~~~~~~----~~~~~~lvk~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~  322 (358)
                      +++++.|++. ++|||+||+++.||+|||+|+++...    ..++++|+|+|+++|+ ...|+++++++++||+|||||+
T Consensus       352 ~~~~~~l~~~~~~EfP~in~~~~g~~~ry~Y~~~~~~~~~~~~~~~~l~k~D~~tg~-~~~~~~~~~~~~~EpvFVPr~~  430 (486)
T PF03055_consen  352 RVSEEPLDDGNPCEFPRINPRYSGRPYRYVYAVGMDPERSPGFPFNGLVKVDLETGE-VQRWSFGPGCFPGEPVFVPRPG  430 (486)
T ss_dssp             EEEEEEEETTEEEEEEEE-GGGTTS--SEEEEEEECSCTS---EEEEEEEEETTTTE-EEEEE-TTTEEE--EEEEE-TT
T ss_pred             eeEHhHhccCCCcccceeCcccCCCcccEEEEEeecccCCcCcCCCEEEEEeccccc-ceEEECCCCceecceEeccCCC
Confidence            8988999987 69999999999999999999876552    3568999999999999 8899999999999999999996


Q ss_pred             CCCCCCCCCCeEEEEEEEeCCCCeeEEEEEeCCCCC
Q 046348          323 DHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI  358 (358)
Q Consensus       323 ~~~~~~~EDDG~lls~v~d~~~~~s~l~ILDA~~l~  358 (358)
                      +    .+|||||||++|+|.+.++|+|+||||++|+
T Consensus       431 ~----~~EdDG~Ll~~v~~~~~~~s~l~VlDA~~l~  462 (486)
T PF03055_consen  431 G----AEEDDGYLLSVVYDSDTNRSELLVLDAKDLE  462 (486)
T ss_dssp             S-----STT-EEEEEEEEETTTTCEEEEEEETTTTC
T ss_pred             C----CCCCceEEEEEEEECCCCccEEEEEeCCCCC
Confidence            4    7999999999999999999999999999985

They are also essential dietary nutrients in animals. Carotenoid oxygenases cleave a variety of carotenoids into a range of biologically important products, including apocarotenoids in plants that function as hormones, pigments, flavours, floral scents and defence compounds, and retinoids in animals that function as vitamins, visual pigments and signalling molecules []. Examples of carotenoid oxygenases include: Beta-carotene-15,15'-monooxygenase (BCDO1; 1.14.99.36 from EC) from animals, which cleaves beta-carotene symmetrically at the central double bond to yield two molecules of retinal []. Beta-carotene-9',10'-dioxygenase (BCDO2) from animals, which cleaves beta-carotene asymmetrically to apo-10'-beta-carotenal and beta-ionone, the latter being converted to retinoic acid. Lycopene is also oxidatively cleaved []. 9-cis-epoxycarotenoid dioxygenase from plants, which cleaves 9-cis xanthophylls to xanthoxin, a precursor of the hormone abscisic acid []. Apocarotenoid-15,15'-oxygenase from bacteria and cyanobacteria, which converts beta-apocarotenals rather than beta-carotene into retinal. This protein has a seven-bladed beta-propeller structure with four hisitidines that hold the iron active centre []. Retinal pigment RPE65 from animals, which in its soluble form binds all-trans retinol, and in its membrane-bound form binds all-trans retinyl esters. RPE65 is important for the production of 11-cis retinal during visual pigment regeneration []. ; PDB: 3NPE_A 2BIX_B 2BIW_A 3KVC_B 3FSN_B.

>PLN02969 9-cis-epoxycarotenoid dioxygenase

Probab=100.00  E-value=5.1e-76  Score=604.83  Aligned_cols=320  Identities=25%  Similarity=0.377  Sum_probs=270.9

Q ss_pred             CcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCceeeeeccc-----------------------------ccccc--
Q 046348           31 GFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDF-----------------------------DEALF--   79 (358)
Q Consensus        31 ~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~-----------------------------~~~l~--   79 (358)
                      .+|+|||||++|+||||||||+|.||+|||+   ||||+|+++|                             .|.+.  
T Consensus       176 ~kn~ANT~V~~~gg~LlAl~E~g~P~~lDP~---TLeT~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~p  252 (610)
T PLN02969        176 MKNVANTSVLKWGGRLLCLWEGGEPYEIDSG---TLETIGRFDLAPDDDSSKDDRLQGSDAWDLAARLLKPILTGVFKMP  252 (610)
T ss_pred             cccCCCcceeeeCCEEEEecCCCCCeEcCcC---ccceeecccccccccccccccccccccccccccccccccccccccC
Confidence            4899999999999999999999999999875   9999999999                             33332  


Q ss_pred             -cCCCCCceeeCCCCcEEEEEecC----CCCCcEEEEEEcCCCCeEEeEeeecCCCcceeeceecCCCEeEEEeCccccC
Q 046348           80 -ASMTAHPKTDMTTKETFAFKFSP----VFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVS  154 (358)
Q Consensus        80 -~~~tAHP~~Dp~tg~~~~~g~~~----~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~  154 (358)
                       ..||||||+||.||++++|+++.    ...+.+++|++|++|++.+++++ ++|.++|||||+|||||+||+++|+++|
T Consensus       253 ~~~ftAHpK~DP~tg~lv~f~~~~~~~~~~~~~~~~y~~d~~G~~~~~~~~-~~p~~~~iHDfaiTeny~Vf~~~P~~~d  331 (610)
T PLN02969        253 KKRLLSHYKIDGRRNRLLVVTCNAEDMLLPRSNFTFYEFDADFKLVQRKEF-KLDDHLMIHDWAFTDTHYVLLANRVKLD  331 (610)
T ss_pred             CccccccCCcCCCCCCEEEEEeccccccCCCceeEEEEECCCCCEecceee-cCCCcceeeeeeccCCEEEEEECceecC
Confidence             36899999999999999999986    24578999999999999999888 9999999999999999999999999999


Q ss_pred             HHHHHc--CC----CCCeeecCCCCc-EEEEEeCCCCCC-CceEE---EEcC-CeeeeeecceeecC--CC--eEEEEEe
Q 046348          155 AANVML--GK----GMPTVFVPEKIP-RIGIILKYATSD-AEMKW---FNVP-GFNAMHVFNAWENG--DD--EIVLMAT  218 (358)
Q Consensus       155 ~~~~l~--~~----~~~~~w~~~~~t-~~~vipR~~~~~-~~v~~---~~~~-~~~~fH~~NA~E~~--~~--~iv~D~~  218 (358)
                      +.+++.  .+    .++|.|+|++++ +|+||||++++. ..++|   +++| +||+||++||||++  +|  +|++|+|
T Consensus       332 ~~~~l~~~~G~~~~~~~l~wdp~~~t~~~~VipR~~~~~~~~~~W~v~~e~~~~~f~fH~~NAfEe~~~~g~~~Ivvd~~  411 (610)
T PLN02969        332 VPGSLLAMAGLSPMISALAVDPSRPSSPVYLLPRFPEKEAGGRDWRVPVEVPSQLWLIHVGNAYEERDDRGNLRIQLHAS  411 (610)
T ss_pred             HHHHHHHhhcCCCchheeEECCCCCccEEEEEECcCCCcccceeeeeEEeeCCCeEEEeccceeecCCCCCceEEEEEEe
Confidence            987552  22    257999999995 899999997543 57889   9998 59999999999974  24  5999997


Q ss_pred             e--cCChhhh------hc--c----------cccccceEEEEEEeCC-CCce---EEEeec---cCCccccccCCCCCCC
Q 046348          219 T--ATSIENL------FH--K----------IDMVHFSLEKVRINLR-TGHV---FRNILS---TRNLELGSINSSYIGK  271 (358)
Q Consensus       219 ~--~~~~~~~------~~--~----------~~~~~~~l~R~~idl~-~g~v---~~~~L~---~~~~EfP~In~~~~gk  271 (358)
                      +  |++...+      +.  .          .....++|+||+||+. +|++   +.+.|.   +.++|||+||+++.||
T Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~idl~~~g~~~~~~~~~l~~~~~~~~EFP~In~~~~Gr  491 (610)
T PLN02969        412 ACSYQWFSFHRMFGYDWQNKKLDPSVMNNAKGKELLPHLVQVSIDLDRTGDCRSCDVEPLSNQWEKPADFPVINPSFSGQ  491 (610)
T ss_pred             ccccccccccccccccccccccCcchhcccCcccccceEEEEEEeCCcCCccccccceeeccccccccccCccChhHCCC
Confidence            4  6543311      00  0          0113468999999996 6765   447775   6799999999999999


Q ss_pred             cCceEEEeeccC------CCCCCeEEEEecCCCeEEEEEEcCCCccCCCcEEeecCC--CCCCCCCCCCeEEEEEEEeCC
Q 046348          272 KNRYVFMGVGKE------IPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNE--DHLEAADEDDGFVVTYIHDEI  343 (358)
Q Consensus       272 ~yry~y~~~~~~------~~~~~~lvk~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~--~~~~~~~EDDG~lls~v~d~~  343 (358)
                      +|||+|+++.++      ..++++|+|+|+++|+ .+.|++++++++||||||||++  ++   ++|||||||++|+|..
T Consensus       492 ~~ry~Y~~~~~~~~~~~~~~~~~~l~K~D~~tg~-~~~w~~g~~~~~~EPvFVPr~~~p~~---~~EDDG~Ll~~v~d~~  567 (610)
T PLN02969        492 KNEYTYAAAASGSRKTLPHFPFDSVVKLDVPDGS-ARSWSTGARRFVGEPVFVPRKSSQGG---GEEDDGYVLVVEYAVS  567 (610)
T ss_pred             cceEEEEeeecCCCcccccCCcCeEEEEECCCCC-EEEEEeCCCCcccCCEEecCCCCCCC---CccCCcEEEEEEEECC
Confidence            999999987652      2368999999999998 7888889999999999999952  23   7899999999999999


Q ss_pred             CCeeEEEEEeCCCCC
Q 046348          344 HEESKFLVMDAKSPI  358 (358)
Q Consensus       344 ~~~s~l~ILDA~~l~  358 (358)
                      .++|+|+||||++|+
T Consensus       568 ~~~S~LvILDAk~~~  582 (610)
T PLN02969        568 DERCYLVILDAKRIG  582 (610)
T ss_pred             CCceEEEEEeCCCCc
Confidence            999999999999985

>KOG1285 consensus Beta, beta-carotene 15,15'-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-46  Score=378.33  Aligned_cols=350  Identities=35%  Similarity=0.529  Sum_probs=307.7

Q ss_pred             CCCCCChhHHHHHHHHHHHHhcCcccCCCCcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCcee-eeeccccccccc
Q 046348            2 LSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVET-VGRWDFDEALFA   80 (358)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT-~g~~~~~~~l~~   80 (358)
                      .|+++|++|.+++.+..+|.+.++.++......+|+..++..++++|+.|.++||..-....+.+|| ++..+|..+|..
T Consensus       199 ~G~~~g~~g~~~~~~~~~r~~~~~~~p~~~~~~~~~~~v~~~~~~~a~~~dd~~~p~yvhs~G~tenyi~~~e~~~~l~~  278 (582)
T KOG1285|consen  199 IGTVYGHFGIARFGLFFARALTVLKNPANGVGLANAGLVWFHNRLLAYSEDDLPYPGYVHSFGDTENYIGRFEFPLRLNL  278 (582)
T ss_pred             cccEEeeechhhccccccceeEEEecCCCccccccccceEeecceeeeccCCCccceEEeecCCccceEeEecCCcccch
Confidence            5999999999999999999999999999999999999999999999999999888777766778999 999999999999


Q ss_pred             CCCCCceeeCCCCcEEEEEecCCCCCcEEEEEEcCCCCeEEeEeeecCCCcceeeceecCCCEeEEEeCccccCHHHHHc
Q 046348           81 SMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVML  160 (358)
Q Consensus        81 ~~tAHP~~Dp~tg~~~~~g~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~  160 (358)
                      .+.|||++||.+|+++...++....+++.|.++++.|.......+ ....+.|+|+||+|||+.|+++.++..++..+..
T Consensus       279 ~~~a~pk~~~~~g~~~~~~yd~~~~~~l~~~~~~~~~~k~~~~~~-~~~~~t~hh~na~eedg~vi~D~~~~~~~~~~~~  357 (582)
T KOG1285|consen  279 SKFAHPKLDPVTGEWFADFYDWVPKPYLIYHKFSKEGGKSVPVEI-FPSFPTFHHDNAFEEDGCVVPDLCVYFDLSEMIR  357 (582)
T ss_pred             hhhccCcccccccchhhhhhcccCCCcEEEEEeccccCccCccee-ccCcceEEEeeeecccCceEEEEEEEechhhhhc
Confidence            999999999999999999999987789999999999888776666 4448999999999999999999999999987774


Q ss_pred             CCCCCeeecCCCCcEEEEEeCCCCCCCceEEEEcCCeeeeeecceeecCCC--eEEEEEeecCChhhhhc-ccccccceE
Q 046348          161 GKGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDD--EIVLMATTATSIENLFH-KIDMVHFSL  237 (358)
Q Consensus       161 ~~~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~~~fH~~NA~E~~~~--~iv~D~~~~~~~~~~~~-~~~~~~~~l  237 (358)
                      ... ++..+..+..|+.+.++...+...++|...+.+++||..|+||+...  .++|--.+......++. ..+....++
T Consensus       358 ~~~-p~~~~~~k~~rfg~~~k~~~d~~~~~~p~~~~~~~~~~~~~~e~~~~~~~~~v~~~~~s~~~~i~~~~de~~~~~l  436 (582)
T KOG1285|consen  358 DTS-PLLYDNGKTLRFGLLSKTAPDARRIVWPLSPSKFAFHLWNNWEKKPYDWEVVVIGSCMSSTSTIFRESDELLGNRL  436 (582)
T ss_pred             ccc-eeecccccccccccccccCCcccceEEEeccccccccchhhhcccCCCceEEeecccCCccchhhcccccchhcee
Confidence            444 78899999999999999887788999999999999999999997422  44444444444444433 345567889


Q ss_pred             EEEEEeCCCCceEEEeecc-CCccccccCCCCCCCcCceEEEeeccCCCCCCeEEEEecCCCeEEEEEEcCCCccCCCcE
Q 046348          238 EKVRINLRTGHVFRNILST-RNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPL  316 (358)
Q Consensus       238 ~R~~idl~~g~v~~~~L~~-~~~EfP~In~~~~gk~yry~y~~~~~~~~~~~~lvk~D~~~g~~~~~~~~~~~~~~~EPv  316 (358)
                      ...++.+.+|...++.+.. .++|+++||..+.||+|||+|++..++++.+++++|+|+.+|+ +.+|..+.+++.|||+
T Consensus       437 ~e~r~~~~tg~~~~~~~~~~~nl~~~~in~~~~Gkk~ryvY~ai~~~~p~~~g~vKvDl~~g~-~~~w~~~~~~~~GEP~  515 (582)
T KOG1285|consen  437 EEIRLNLKTGLEFPRPVIPKINLDFGMINRSYLGKKYRYVYGAILDPWPKVSGIVKVDLVTGE-VKKWREGGGRPGGEPI  515 (582)
T ss_pred             eeeeecccccccccceeecccccccccccceeecccceEEEEEecCCccCCCeEEEEEecCCc-eeeEecCCCccCCCce
Confidence            9999999998776655543 5999999999999999999999999998899999999999998 7888888888888999


Q ss_pred             EeecCCCCCCCCCCCCeEEEEEEEeCCCCeeEEEEEeCCCCC
Q 046348          317 FVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI  358 (358)
Q Consensus       317 FVPrp~~~~~~~~EDDG~lls~v~d~~~~~s~l~ILDA~~l~  358 (358)
                      |||+|+.    .+||||||+++|++....+|+|+||||++|+
T Consensus       516 FVP~p~~----~eEDdG~Iv~~v~~~~~~~s~l~ildAK~l~  553 (582)
T KOG1285|consen  516 FVPRPGT----LEEDDGYIVSVVHDESKEKSFLLILDAKTLE  553 (582)
T ss_pred             EecCCCC----cccCCcEEEEEEEcCCCCcccEEEEeccccc
Confidence            9999943    8999999999999999999999999999974

>KOG1285 consensus Beta, beta-carotene 15,15'-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=1.8e-20  Score=189.52  Aligned_cols=244  Identities=17%  Similarity=0.157  Sum_probs=165.2

Q ss_pred             CCCCcCcCceeeEEE-CCeEEEEecCCCCeEEecCCCCCceeeeeccccc-ccc-cCCCCCceeeCCCCcEEE-EEec-C
Q 046348           28 LKKGFGLANTSLAFF-SSKLLALGESDLPYIINSTREGDVETVGRWDFDE-ALF-ASMTAHPKTDMTTKETFA-FKFS-P  102 (358)
Q Consensus        28 ~~~~~~~aNt~v~~~-~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~~~-~l~-~~~tAHP~~Dp~tg~~~~-~g~~-~  102 (358)
                      +...+|+||+++... |+++||.+|.-.-+++|+   +||+|+..++|.+ .+. ..++|||+.|+. |++++ +|.. +
T Consensus       136 g~~~rd~aN~~f~pv~g~~~~~gtet~~~~ki~~---~tl~t~~~~~~~k~~v~~~~~gah~~~d~~-G~~~g~~g~~~~  211 (582)
T KOG1285|consen  136 GESIRDNANPNFTPVGGHHLYAGTETPHAVKIDP---GTLETTYKVRFTKTLVQEHTAGAHPHPDEI-GTVYGHFGIARF  211 (582)
T ss_pred             ccccccCCCcceeecCCCeeEecCCCceeEEecC---cccceeEeeccccceeeeeecccCCcccCc-ccEEeeechhhc
Confidence            456799999999999 889999999954444443   5999999999999 444 357899999986 99999 6665 3


Q ss_pred             CC--CCcEEEEEEcCCCCeE----------EeEe--eecCCCcceeeceecCCCEeEEEeCccccCHHHHHcCC------
Q 046348          103 VF--SPHLTFFRFDANGIKQ----------KDVP--ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGK------  162 (358)
Q Consensus       103 ~~--~~~~~~~~~d~~g~~~----------~~~~--~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~~~------  162 (358)
                      ..  ...++.....+.|.-.          +...  .-+++.+.|||+|++||||+|++++|+++++.+++...      
T Consensus       212 ~~~~~r~~~~~~~p~~~~~~~~~~~v~~~~~~~a~~~dd~~~p~yvhs~G~tenyi~~~e~~~~l~~~~~a~pk~~~~~g  291 (582)
T KOG1285|consen  212 GLFFARALTVLKNPANGVGLANAGLVWFHNRLLAYSEDDLPYPGYVHSFGDTENYIGRFEFPLRLNLSKFAHPKLDPVTG  291 (582)
T ss_pred             cccccceeEEEecCCCccccccccceEeecceeeeccCCCccceEEeecCCccceEeEecCCcccchhhhccCccccccc
Confidence            22  1233343443322110          1111  12567899999999999999999999999998887422      


Q ss_pred             ---CCCeeecCCCCcEEEEEeCCCCCCCceEEEEcCCeeeeeecceeecCCCeEEEEEeecCChhhhhc-c--cccccce
Q 046348          163 ---GMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFH-K--IDMVHFS  236 (358)
Q Consensus       163 ---~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~~~fH~~NA~E~~~~~iv~D~~~~~~~~~~~~-~--~~~~~~~  236 (358)
                         ..++.|.|....+++++.+++++..+++.  .+++++|||+||||++ +.|++|.|++.+...+.. .  .-....+
T Consensus       292 ~~~~~~yd~~~~~~l~~~~~~~~~~k~~~~~~--~~~~~t~hh~na~eed-g~vi~D~~~~~~~~~~~~~~~p~~~~~~k  368 (582)
T KOG1285|consen  292 EWFADFYDWVPKPYLIYHKFSKEGGKSVPVEI--FPSFPTFHHDNAFEED-GCVVPDLCVYFDLSEMIRDTSPLLYDNGK  368 (582)
T ss_pred             chhhhhhcccCCCcEEEEEeccccCccCccee--ccCcceEEEeeeeccc-CceEEEEEEEechhhhhcccceeeccccc
Confidence               34679999999999999998765444432  3459999999999999 999999999988662211 1  1122344


Q ss_pred             EEEEEEeCCCCceEEE---eeccCCccccccCCCCCCCcCceEEEe
Q 046348          237 LEKVRINLRTGHVFRN---ILSTRNLELGSINSSYIGKKNRYVFMG  279 (358)
Q Consensus       237 l~R~~idl~~g~v~~~---~L~~~~~EfP~In~~~~gk~yry~y~~  279 (358)
                      .-|+.++.++.....+   .+.-..+-|| ...++.-++|.+.+.+
T Consensus       369 ~~rfg~~~k~~~d~~~~~~p~~~~~~~~~-~~~~~e~~~~~~~~~v  413 (582)
T KOG1285|consen  369 TLRFGLLSKTAPDARRIVWPLSPSKFAFH-LWNNWEKKPYDWEVVV  413 (582)
T ss_pred             ccccccccccCCcccceEEEecccccccc-chhhhcccCCCceEEe
Confidence            5555555544322111   1222234555 3333333566554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	358
3npe_A	529	Structure Of Vp14 In Complex With Oxygen Length = 5		1e-57
2biw_A	490	Crystal Structure Of Apocarotenoid Cleavage Oxygena		3e-16

>pdb|3NPE|A Chain A, Structure Of Vp14 In Complex With Oxygen Length = 529

Iteration: 1
 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 192/356 (53%), Gaps = 9/356 (2%)
Query: 5   IYGIADIIQCVAAVARVLMGHINLKKGFGLANTXXXXXXXXXXXXGESDLPYIINSTREG 64
           ++G + I +     AR   G ++   G G+AN              E DLPY +    +G
Sbjct: 143 LHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPYHVRVADDG 202
Query: 65  DVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVP 124
           D+ETVGR+DFD  L  +M AHPK D  T E  A  +  +  P+L +F F  +G K  DV 
Sbjct: 203 DLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVE 262
Query: 125 ILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKYAT 184
           I  + +PT IHDFAIT+   +  + Q+ V     ML  G P V    K  R G++ K+A 
Sbjct: 263 I-PLEQPTMIHDFAITENLVVVPDHQV-VFKLQEMLRGGSPVVLDAAKTSRFGVLPKHAA 320
Query: 185 SDAEMKWFNVPGFNAMHVFNAWEN-GDDEIVLMATTATSIENLFHKID-MVHFSLEKVRI 242
             +EM W +VP     H++NAWE+    E+V++ +  T  +++F++ D  +   L ++R+
Sbjct: 321 DASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGSCMTPADSIFNESDERLESVLTEIRL 380
Query: 243 NLRTGHVFRNIL----STRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKE 298
           + RTG   R  +       NLE+G +N + +G++ RY ++ V +  PK+ G  K+DL   
Sbjct: 381 DARTGRSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLSTG 440
Query: 299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDA 354
            E+++  YG   FGGEP FVP +        EDDG+V+T++HDE    S+ LV++A
Sbjct: 441 -ELTKFEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNA 495

>pdb|2BIW|A Chain A, Crystal Structure Of Apocarotenoid Cleavage Oxygenase From Synechocystis, Native Enzyme Length = 490

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 21/237 (8%)
Query: 132 TFIHDFAITKRFAIFSETQLAVSAANVML---GKGMPTVFVPEKIPRIGIILKYATSDAE 188
            FIHDFAIT  +AIF +  + ++    +    G G    F P+K  +I ++ +      E
Sbjct: 235 AFIHDFAITPHYAIFLQNNVTLNGLPYLFGLRGAGECVQFHPDKPAQIILVPR---DGGE 291
Query: 189 MKWFNVPGFNAMHVFNAW-ENGD---DEIVLMATTATSIENLFHKIDMVHF---SLEKVR 241
           +K   V      H  NA+ ENG    D I   +      +  F   +  +     L +  
Sbjct: 292 IKRIPVQAGFVFHHANAFEENGKIILDSICYNSLPQVDTDGDFRSTNFDNLDPGQLWRFT 351
Query: 242 INLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEI---PKMEGVVKIDLEKE 298
           I+     V + ++ +R  E   ++   +G+  RYV+MG          ++ ++K+DLE  
Sbjct: 352 IDPAAATVEKQLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGNAPLQAILKVDLESG 411
Query: 299 IEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAK 355
            E  R F  P  F GEP+FVPR         EDDG+++  I+      S+ +++DA+
Sbjct: 412 TETLRSF-APHGFAGEPIFVPRP----GGVAEDDGWLLCLIYKADLHRSELVILDAQ 463

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	358
3npe_A	529	9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti;	4e-85
2biw_A	490	Apocarotenoid-cleaving oxygenase; non-heme iron, c	1e-77
3kvc_A	533	Retinoid isomerohydrolase; 7-bladed beta-propeller	9e-53
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays} Length = 529

 Score =  266 bits (680), Expect = 4e-85
 Identities = 126/360 (35%), Positives = 199/360 (55%), Gaps = 9/360 (2%)

Query: 3   SGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTR 62
             ++G + I +     AR   G ++   G G+AN  L +F+ +LLA+ E DLPY +    
Sbjct: 141 GELHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPYHVRVAD 200

Query: 63  EGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKD 122
           +GD+ETVGR+DFD  L  +M AHPK D  T E  A  +  +  P+L +F F  +G K  D
Sbjct: 201 DGDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDD 260

Query: 123 VPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFVPEKIPRIGIILKY 182
           V I  + +PT IHDFAIT+   +  + Q+      ++ G G P V    K  R G++ K+
Sbjct: 261 VEI-PLEQPTMIHDFAITENLVVVPDHQVVFKLQEMLRG-GSPVVLDAAKTSRFGVLPKH 318

Query: 183 ATSDAEMKWFNVPGFNAMHVFNAWEN-GDDEIVLMATTATSIENLF-HKIDMVHFSLEKV 240
           A   +EM W +VP     H++NAWE+    E+V++ +  T  +++F    + +   L ++
Sbjct: 319 AADASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGSCMTPADSIFNESDERLESVLTEI 378

Query: 241 RINLRTGHVFRNIL----STRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLE 296
           R++ RTG   R  +       NLE+G +N + +G++ RY ++ V +  PK+ G  K+DL 
Sbjct: 379 RLDARTGRSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLS 438

Query: 297 KEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
              E+++  YG   FGGEP FVP +        EDDG+V+T++HDE    S+ LV++A  
Sbjct: 439 TG-ELTKFEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNAAD 497

>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A* Length = 490

 Score =  245 bits (627), Expect = 1e-77
 Identities = 86/361 (23%), Positives = 153/361 (42%), Gaps = 35/361 (9%)

Query: 19  ARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEAL 78
           A   +  I   +   +ANT++ ++  +LLAL E   P+ +      ++ T+G  D    L
Sbjct: 118 AGGWLKTIFDLRLKNIANTNITYWGDRLLALWEGGQPHRLEP---SNLATIGLDDLGGIL 174

Query: 79  FAS--MTAHPKTDMTTKE------TFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINR 130
                ++AHP+ D  +           F      S  LT    D  G   +     +   
Sbjct: 175 AEGQPLSAHPRIDPASTFDGGQPCYVTFSIKSSLSSTLTLLELDPQGKLLRQKTE-TFPG 233

Query: 131 PTFIHDFAITKRFAIFSETQLAVSAANVMLGK---GMPTVFVPEKIPRIGIILKYATSDA 187
             FIHDFAIT  +AIF +  + ++    + G    G    F P+K  +I ++ +      
Sbjct: 234 FAFIHDFAITPHYAIFLQNNVTLNGLPYLFGLRGAGECVQFHPDKPAQIILVPRD---GG 290

Query: 188 EMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLFHKIDMVHFS--------LEK 239
           E+K   V      H  NA+E  + +I+L +    S+  +    D    +        L +
Sbjct: 291 EIKRIPVQAGFVFHHANAFEE-NGKIILDSICYNSLPQVDTDGDFRSTNFDNLDPGQLWR 349

Query: 240 VRINLRTGHVFRNILSTRNLELGSINSSYIGKKNRYVFMGVGKEI---PKMEGVVKIDLE 296
             I+     V + ++ +R  E   ++   +G+  RYV+MG          ++ ++K+DLE
Sbjct: 350 FTIDPAAATVEKQLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGNAPLQAILKVDLE 409

Query: 297 KEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKS 356
                + R + P  F GEP+FVPR         EDDG+++  I+      S+ +++DA+ 
Sbjct: 410 SG-TETLRSFAPHGFAGEPIFVPRPGG----VAEDDGWLLCLIYKADLHRSELVILDAQD 464

Query: 357 P 357
            
Sbjct: 465 I 465

>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A Length = 533

 Score =  181 bits (461), Expect = 9e-53
 Identities = 61/407 (14%), Positives = 131/407 (32%), Gaps = 76/407 (18%)

Query: 16  AAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFD 75
             +      +    +    A  ++        A  E++    +N      +ET+ + D  
Sbjct: 113 KNIFSRFFSYFRGVEVTDNALVNIYPVGEDYYACTETNFITKVNPE---TLETIKQVDLC 169

Query: 76  EALFAS-MTAHPKTD---------MTTKETFAFKFSPVFSPHLTFFRFDANGIKQK--DV 123
             +  +  TAHP  +             + F+  ++ V  P L   + D     +     
Sbjct: 170 NYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEIVVQF 229

Query: 124 PILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGK-------GMPTVFVPEKIPRI 176
           P     +P+++H F +T  + +F ET + ++    +                       +
Sbjct: 230 PCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWL 289

Query: 177 GIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTAT--------SIENLFH 228
            I  K          +    FN  H  N +E+ +  IV +              + NL  
Sbjct: 290 HIADKK-RKKYINNKYRTSPFNLFHHINTYEDHEFLIVDLCCWKGFEFVYNYLYLANLRE 348

Query: 229 KIDMVHFSLEK----------VRINLRTGHVFRNILST---------------------- 256
             + V  +  K          + +N+      +N+++                       
Sbjct: 349 NWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAILCSDETIWLEPEVL 408

Query: 257 -----RNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCF 311
                +  E   IN    G K      G+G      + + K++++   + +  +  P  +
Sbjct: 409 FSGPRQAFEFPQINYQKYGGKPYTYAYGLGLNHFVPDRLCKLNVKT--KETWVWQEPDSY 466

Query: 312 GGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIHEE--SKFLVMDAKS 356
             EP+FV       +A +EDDG V++ +      +  +  L+++AK 
Sbjct: 467 PSEPIFVSHP----DALEEDDGVVLSVVVSPGAGQKPAYLLILNAKD 509

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 59/384 (15%), Positives = 102/384 (26%), Gaps = 119/384 (30%)

Query: 7   GIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPY---------- 56
            + D +   A    + + H              +    K L     DLP           
Sbjct: 276 QVTDFLS-AATTTHISLDH--HSMTLTPDE-VKSLLL-KYLDCRPQDLPREVLTTNPRRL 330

Query: 57  --IINSTREGDVETVGRWDFDEALFASMTAHPKTDMTTKETFAFKFS-PVFSPHLTFFRF 113
             I  S R+G    +  WD           H   D   K T   + S  V  P      F
Sbjct: 331 SIIAESIRDG----LATWDN--------WKHVNCD---KLTTIIESSLNVLEPAEYRKMF 375

Query: 114 DANGIKQKDVPI----LSI--NRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTV 167
           D   +      I    LS+            +  +   +S   L            +P++
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS---LVEKQPKEST-ISIPSI 431

Query: 168 FVPEKIPRIG-------IILKYATSDA-----------EMKWFNVPGFNAMHVFNAWENG 209
           ++  K+           I+  Y                +  +++  G    H+ N  E+ 
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH---HLKNI-EHP 487

Query: 210 DDEIVLMATTATSIENLFHKI--DMVHFSLEKVRINLRTGHVFRNILSTRNLELGSIN-- 265
           +               LF  +  D   F  +K+R        +    S  N  L  +   
Sbjct: 488 ER------------MTLFRMVFLDF-RFLEQKIR---HDSTAWNASGSILNT-LQQLKFY 530

Query: 266 SSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHL 325
             YI   +           PK E +V   +                     F+P+ E++L
Sbjct: 531 KPYICDND-----------PKYERLVN-AILD-------------------FLPKIEENL 559

Query: 326 EAADEDD--GFVVTYIHDEIHEES 347
             +   D     +    + I EE+
Sbjct: 560 ICSKYTDLLRIALMAEDEAIFEEA 583

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	358
3npe_A	529	9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti;	100.0
2biw_A	490	Apocarotenoid-cleaving oxygenase; non-heme iron, c	100.0
3kvc_A	533	Retinoid isomerohydrolase; 7-bladed beta-propeller	100.0

>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}

Probab=100.00  E-value=5e-90  Score=699.12  Aligned_cols=354  Identities=35%  Similarity=0.654  Sum_probs=320.1

Q ss_pred             CCCCCChhHHHHHHHHHHHHhcCcccCCCCcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCceeeeecccccccccC
Q 046348            2 LSGIYGIADIIQCVAAVARVLMGHINLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALFAS   81 (358)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~~~~l~~~   81 (358)
                      +|+++|.+++++..+...|.++|+++..+.+|+|||||++|+||||||||+|.||++++||+.||||+|.+||+|+|+..
T Consensus       140 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ANtnvv~~~g~llAl~E~g~Py~~~idp~~tLeT~G~~d~~g~l~~~  219 (529)
T 3npe_A          140 IGELHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPYHVRVADDGDLETVGRYDFDGQLGCA  219 (529)
T ss_dssp             TTTTTSSTHHHHHHHHHHHHHTTSCCGGGCCCCCCSCEEEETTEEEECCTTSCCEEEEECTTSCEEEEEECCGGGCCCSC
T ss_pred             cccccccchhhhhhhhhhhcccccccccccCCCCeEEEEEECCEEEEEEcCCCceEEecCCCCCcceeeeeccCCccCCc
Confidence            57888999999999999999999998888899999999999999999999999999977654599999999999999999


Q ss_pred             CCCCceeeCCCCcEEEEEecCCCCCcEEEEEEcCCCCeEEeEeeecCCCcceeeceecCCCEeEEEeCccccCHHHHHcC
Q 046348           82 MTAHPKTDMTTKETFAFKFSPVFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLG  161 (358)
Q Consensus        82 ~tAHP~~Dp~tg~~~~~g~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~~  161 (358)
                      ||||||+||.|||+++|+|+..+.+++++++++++|++.+.+++ +++.++|||||+|||||+||+++|+.+|+.+|+ .
T Consensus       220 ~tAHPk~Dp~TGel~~f~y~~~~~p~~~~~~~~~~G~~~~~~~i-~~~~p~~~HDFaiTenyvVf~~~Pl~~~~~~~~-~  297 (529)
T 3npe_A          220 MIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEI-PLEQPTMIHDFAITENLVVVPDHQVVFKLQEML-R  297 (529)
T ss_dssp             CCSCCEECTTTCCEEEEECCSSSSCCCEEEEECTTCCBCCCEEC-CCSSCBCCCCCEECSSEEEEEECSEEECGGGGT-T
T ss_pred             ccccCcCCCCCCcEEEEEeecCCCCcEEEEEECCCCCEEEEEEE-eCCCCceEeeEEecCCeEEEEeCCeEEcHHHHh-C
Confidence            99999999999999999999877789999999999999888888 899999999999999999999999999999997 4


Q ss_pred             CCCCeeecCCCCcEEEEEeCCCCCCCceEEEEcCCeeeeeecceeecCC-CeEEEEEeecCChhhhhcc-cccccceEEE
Q 046348          162 KGMPTVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGD-DEIVLMATTATSIENLFHK-IDMVHFSLEK  239 (358)
Q Consensus       162 ~~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~~~fH~~NA~E~~~-~~iv~D~~~~~~~~~~~~~-~~~~~~~l~R  239 (358)
                      +++++.|+|++++||+||||++++.+.++||++|+||+||++||||+++ |+|++|.|++.+.+.+++. ..+.+++|+|
T Consensus       298 g~~~~~~~p~~~tr~~VipR~~~~~~~vrw~e~~~~f~fH~~NA~Ee~~~~~ivv~~~~~~~~~~~~~~~~~~~~~~l~r  377 (529)
T 3npe_A          298 GGSPVVLDAAKTSRFGVLPKHAADASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGSCMTPADSIFNESDERLESVLTE  377 (529)
T ss_dssp             TCCSEEECTTSCCEEEEEETTCSSGGGCEEEECTTCEEEEEEEEEEETTTTEEEEEEEEECCCCCSCCSSSSCCCCEEEE
T ss_pred             CCCceEECCCCCcEEEEEECCCCCCCceEEEEcCCEEEEEecccEecCCCCeEEEEEecccCchhhhhccchhhccceEE
Confidence            5689999999999999999997666689999999999999999999863 7899988887655544432 3456789999


Q ss_pred             EEEeCCCCceEEEeec----cCCccccccCCCCCCCcCceEEEeeccCCCCCCeEEEEecCCCeEEEEEEcCCCccCCCc
Q 046348          240 VRINLRTGHVFRNILS----TRNLELGSINSSYIGKKNRYVFMGVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEP  315 (358)
Q Consensus       240 ~~idl~~g~v~~~~L~----~~~~EfP~In~~~~gk~yry~y~~~~~~~~~~~~lvk~D~~~g~~~~~~~~~~~~~~~EP  315 (358)
                      |+||+.+|+++++.|.    +.++|||+||++|.||+|||+|+++.++...+++|+|+|++||+ ...||+++++++|||
T Consensus       378 ~rl~l~~g~~~~~~l~~~~~~~~~EfP~In~~~~Gr~~Ry~Y~~~~~~~~~~~~l~K~D~~tg~-~~~~~~g~~~~~~EP  456 (529)
T 3npe_A          378 IRLDARTGRSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLSTGE-LTKFEYGEGRFGGEP  456 (529)
T ss_dssp             EEECTTTCCEEEEESSCSSSCCCEEEEEECGGGTTSCCSEEEEEECCSTTSCCEEEEEETTTCC-EEEEECCTTBCCCCC
T ss_pred             EEEcCCCCCEEeEEecccccCccccCceEChhHcCCccceEEEeccCCCCCcceEEEEecCCCc-eEEEEcCCCccccCC
Confidence            9999999999888877    48999999999999999999999998776678999999999998 788999999999999


Q ss_pred             EEeecCCCCCCCCCCCCeEEEEEEEeCCCCeeEEEEEeCCCCC
Q 046348          316 LFVPRNEDHLEAADEDDGFVVTYIHDEIHEESKFLVMDAKSPI  358 (358)
Q Consensus       316 vFVPrp~~~~~~~~EDDG~lls~v~d~~~~~s~l~ILDA~~l~  358 (358)
                      ||||||++.+.+++|||||||++|+|...++|+|+||||++|+
T Consensus       457 vFVPrp~~~~~~~~EDDG~lLs~V~d~~~~~S~LlILDA~~l~  499 (529)
T 3npe_A          457 CFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNAADMR  499 (529)
T ss_dssp             EEEECCSCSSSSCCTTCEEEEEEEEBSSCCCEEEEEEETTTTE
T ss_pred             EeeeCCCCCCCCCCCCCcEEEEEEEECCCCcEEEEEEeCCCCc
Confidence            9999996100017999999999999999999999999999984

>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*

Probab=100.00  E-value=3e-84  Score=653.04  Aligned_cols=315  Identities=26%  Similarity=0.436  Sum_probs=286.8

Q ss_pred             CcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCceeeeeccccccc-cc-CCCCCceeeCC------CCcEEEEEecC
Q 046348           31 GFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEAL-FA-SMTAHPKTDMT------TKETFAFKFSP  102 (358)
Q Consensus        31 ~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~~~~l-~~-~~tAHP~~Dp~------tg~~~~~g~~~  102 (358)
                      .+|+|||||++|+||||||||+|.||+|||.   ||||+|.++|+++| ++ .||||||+||.      ||||+|||++.
T Consensus       130 ~~~~aNT~v~~~~g~llAl~E~~~p~~ldp~---tLeT~G~~d~~g~l~~~~~~tAHPk~Dp~~~~~~gtgel~~fg~~~  206 (490)
T 2biw_A          130 LKNIANTNITYWGDRLLALWEGGQPHRLEPS---NLATIGLDDLGGILAEGQPLSAHPRIDPASTFDGGQPCYVTFSIKS  206 (490)
T ss_dssp             BCCCCCSEEEEETTEEEEECTTSCCEEECTT---TCCEEEECCTTTTSCTTCCCCSCCEEESSCTTTTTCCEEEEEEEEE
T ss_pred             cCCCCEEEEEEECCEEEEEEcCCCCEecccc---cccEeeeeccCCcccCCcccccCceECccccccCCCCeEEEEEecC
Confidence            6899999999999999999999999999874   99999999999999 54 79999999999      99999999998


Q ss_pred             CCCCcEEEEEEcCCCCeEEeEeeecCCCcceeeceecCCCEeEEEeCccccCHHHHHcCC---CCCeeecCCCCcEEEEE
Q 046348          103 VFSPHLTFFRFDANGIKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGK---GMPTVFVPEKIPRIGII  179 (358)
Q Consensus       103 ~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~~~---~~~~~w~~~~~t~~~vi  179 (358)
                      ++...++++++|++|++.+..++ +++.++|||||+|||||+||+++|+.+|+.++++++   ..++.|+|++++||+||
T Consensus       207 ~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~HDfaiTeny~V~~~~P~~~~~~~~~~g~~~~~~~~~~~p~~~tr~~Vi  285 (490)
T 2biw_A          207 SLSSTLTLLELDPQGKLLRQKTE-TFPGFAFIHDFAITPHYAIFLQNNVTLNGLPYLFGLRGAGECVQFHPDKPAQIILV  285 (490)
T ss_dssp             SSEEEEEEEEECTTSCEEEEEEE-EEESCCCCCCCEECSSEEEEEECCEEECCHHHHTTSSCGGGGEEECTTSCEEEEEE
T ss_pred             CCCcEEEEEEECCCCCEEeeEEE-eCCCCceEeeeeccCCEEEEEeCCeEEcHHHHhhccCCccceeEeCCCCCcEEEEE
Confidence            76556999999999999988887 899999999999999999999999999999998654   36899999999999999


Q ss_pred             eCCCCCCCceEEEEcCCeeeeeecceeecCCCeEEEEEeecCChhhhh-----cc---cccccceEEEEEEeCCCCceEE
Q 046348          180 LKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATSIENLF-----HK---IDMVHFSLEKVRINLRTGHVFR  251 (358)
Q Consensus       180 pR~~~~~~~v~~~~~~~~~~fH~~NA~E~~~~~iv~D~~~~~~~~~~~-----~~---~~~~~~~l~R~~idl~~g~v~~  251 (358)
                      ||+ +  +.++||++|+||+||++||||++ ++||+|+|+|++.+.+.     ..   ...++++|+||+||+++|++++
T Consensus       286 pR~-~--~~v~~f~~~~~f~fH~~NA~Ee~-~~Iv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~R~~i~l~~g~v~~  361 (490)
T 2biw_A          286 PRD-G--GEIKRIPVQAGFVFHHANAFEEN-GKIILDSICYNSLPQVDTDGDFRSTNFDNLDPGQLWRFTIDPAAATVEK  361 (490)
T ss_dssp             ETT-S--CCCEEEEECCCEEEEEEEEEEET-TEEEEEEEEESCCCCCCTTCCGGGCCGGGSCCCEEEEEEEETTTTEEEE
T ss_pred             ECC-C--CccEEEecCCCeEEecccceecC-CeEEEEEeccCCcccccccccccccccccCCCceEEEEEEECCCCceEE
Confidence            998 3  46899999999999999999997 89999999998755321     01   1234679999999999999999


Q ss_pred             EeeccCCccccccCCCCCCCcCceEEEeecc---CCCCCCeEEEEecCCCeEEEEEEcCCCccCCCcEEeecCCCCCCCC
Q 046348          252 NILSTRNLELGSINSSYIGKKNRYVFMGVGK---EIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAA  328 (358)
Q Consensus       252 ~~L~~~~~EfP~In~~~~gk~yry~y~~~~~---~~~~~~~lvk~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~~~~~~~  328 (358)
                      +.|++.++|||+||+++.||+|||+|+++.+   ....+++|+|+|+++|+ .+.|++++|+++|||+|||||++    +
T Consensus       362 ~~l~~~~~EfP~In~~~~G~~~Ry~Y~~~~~~~~~~~~~~~l~K~D~~tg~-~~~~~~g~g~~~~EPvFVPrp~~----~  436 (490)
T 2biw_A          362 QLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGNAPLQAILKVDLESGT-ETLRSFAPHGFAGEPIFVPRPGG----V  436 (490)
T ss_dssp             EEEECSCEEEEECCGGGTTSCCSEEEEEECSSSSSCCCCCEEEEEETTTTE-EEEEECTTTEECCCCEEEECTTC----C
T ss_pred             EeccCCcccccccChhhCCceeeeEEEEeecCCCCCCCCCeEEEEECCCCC-EEEEECCCCccccCCEEecCCCC----C
Confidence            9999999999999999999999999999875   34568999999999998 78888899999999999999964    7


Q ss_pred             CCCCeEEEEEEEeCCCCeeEEEEEeCCCCC
Q 046348          329 DEDDGFVVTYIHDEIHEESKFLVMDAKSPI  358 (358)
Q Consensus       329 ~EDDG~lls~v~d~~~~~s~l~ILDA~~l~  358 (358)
                      +|||||||++|+|..+++|+|+||||++|+
T Consensus       437 ~EDDG~ll~~V~d~~~~~S~l~IlDA~~~~  466 (490)
T 2biw_A          437 AEDDGWLLCLIYKADLHRSELVILDAQDIT  466 (490)
T ss_dssp             STTCEEEEEEEEETTTTEEEEEEEETTCTT
T ss_pred             CCCCcEEEEEEEeCCCCceeEEEEccCCCC
Confidence            999999999999999999999999999985

>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A 4f2z_A 4f30_A 4f3a_A 4f3d_A

Probab=100.00  E-value=2.1e-79  Score=623.44  Aligned_cols=320  Identities=16%  Similarity=0.185  Sum_probs=260.2

Q ss_pred             ccCCCCcCcCceeeEEECCeEEEEecCCCCeEEecCCCCCceeeeecccccccc-cCCCCCceeeCCCCcEEEEEecCCC
Q 046348           26 INLKKGFGLANTSLAFFSSKLLALGESDLPYIINSTREGDVETVGRWDFDEALF-ASMTAHPKTDMTTKETFAFKFSPVF  104 (358)
Q Consensus        26 ~~~~~~~~~aNt~v~~~~g~llAl~E~g~P~~ld~~~~~TLeT~g~~~~~~~l~-~~~tAHP~~Dp~tg~~~~~g~~~~~  104 (358)
                      +++.+.+|+|||||++|+||||||||++.||+|||+   ||||+|.++|++.|+ ..||||||+|| |||++|||+++++
T Consensus       123 ~~~~~~~~~ANt~v~~~~g~LlAl~E~~~p~~iDp~---tLeT~G~~d~~g~l~~~~~tAHPk~Dp-tGel~~fg~~~~~  198 (533)
T 3kvc_A          123 FRGVEVTDNALVNIYPVGEDYYACTETNFITKVNPE---TLETIKQVDLCNYVSVNGATAHPHIEN-DGTVYNIGNCFGK  198 (533)
T ss_dssp             ----CCCCCCCSEEEEETTEEEEECSSSEEEEECTT---TCCEEEEEEHHHHSSCSCCCSCCEECT-TSCEEEEEEECC-
T ss_pred             hccCCCCCCCEEEEEEECCEEEEEEcCCcCEEeChH---HcccccccccCCccCCCccCCCCccCC-CCCEEEEeeccCC
Confidence            333356899999999999999999999999999875   999999999999997 57999999999 9999999999875


Q ss_pred             C--CcEEEEEEcCCC-----CeEE-----eEeeecCCCcceeeceecCCCEeEEEeCccccCHHHHHcC----CC---CC
Q 046348          105 S--PHLTFFRFDANG-----IKQK-----DVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLG----KG---MP  165 (358)
Q Consensus       105 ~--~~~~~~~~d~~g-----~~~~-----~~~~~~~~~~~~iHdf~~Teny~V~~~~P~~~~~~~~l~~----~~---~~  165 (358)
                      .  +.+.++++++++     .+.+     .++..+++.|+|||||+|||||+||+++|+.+|+.+|+++    +.   ++
T Consensus       199 ~~~~~y~v~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~p~~iHDFaiTeny~Vf~~~P~~~~~~~~~~g~~~~~~~~~~~  278 (533)
T 3kvc_A          199 NFSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDC  278 (533)
T ss_dssp             --CCEEEEEEECCCCTTCCCGGGGCEEEEEEECSSTTCCBCCCCCEECSSEEEEEECSEEEC-----------CCCSGGG
T ss_pred             CCCcEEEEEEECccccccccccccceeEEeeccccCCCCceeeeeeecCCEEEEEeCCeEEcHHHHhhcccccCCChHHh
Confidence            3  678888887542     1211     1222245689999999999999999999999999999865    33   37


Q ss_pred             eeecCCCCcEEEEEeCCCCCCCceEEEEcCCeeeeeecceeecCCCeEEEEEeecCC-hhhhh----ccc----------
Q 046348          166 TVFVPEKIPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGDDEIVLMATTATS-IENLF----HKI----------  230 (358)
Q Consensus       166 ~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~~~fH~~NA~E~~~~~iv~D~~~~~~-~~~~~----~~~----------  230 (358)
                      +.|+|++++||+||||++++ ..++||++++||+||++||||++ |+||+|+|+|++ ...+.    +.+          
T Consensus       279 ~~~~p~~~tr~~VipR~~~~-~~~~~~~~~~~f~fH~~NA~Ee~-~~Iv~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  356 (533)
T 3kvc_A          279 FESNETMGVWLHIADKKRKK-YINNKYRTSPFNLFHHINTYEDH-EFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKN  356 (533)
T ss_dssp             EEECSSCCEEEEEEETTTTE-EEEEEEEECCEEEEEEEEEEEET-TEEEEEEEEEESSSCGGGGCBHHHHTSCHHHHHHH
T ss_pred             eeecCCCCcEEEEEECCCCC-cccEEEEeCCeeEEeeeeeEEeC-CEEEEEEeeeCCchhhhhhhhhhhhcccchhcccc
Confidence            99999999999999999753 23578999999999999999987 899999999987 33211    100          


Q ss_pred             --ccccceEEEEEEeCCCC------------------------c--eEEEeecc--C-CccccccCC-CCCCCcCceEEE
Q 046348          231 --DMVHFSLEKVRINLRTG------------------------H--VFRNILST--R-NLELGSINS-SYIGKKNRYVFM  278 (358)
Q Consensus       231 --~~~~~~l~R~~idl~~g------------------------~--v~~~~L~~--~-~~EfP~In~-~~~gk~yry~y~  278 (358)
                        ....++|+||+||+.++                        +  ++.+.|++  . ++|||+||+ ++.||+|||+|+
T Consensus       357 ~~~~~~~~l~R~~l~l~~~~~~~~~nl~~~~~~~~~a~~~~~~~~~~~~~~l~~~~~~~~EfP~In~~~~~Gr~~Ry~Y~  436 (533)
T 3kvc_A          357 ARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYGGKPYTYAYG  436 (533)
T ss_dssp             HTTSCEEEEEEEEEESCCCGGGTTSBCCCCTTCCCEEEECTTSEEEEECEEEECBTTEEEEEEECCHHHHTTSCCCEEEE
T ss_pred             ccccCCceEEEEEEeCCcccccccccccccccccceeeeccCCceeeeeeeeccCCcccccCceECHHHhCCCcccEEEE
Confidence              13567899999999874                        2  34567774  6 899999999 799999999999


Q ss_pred             eeccCCCCCCeEEEEecCCCeEEEEEEcCCCccCCCcEEeecCCCCCCCCCCCCeEEEEEEEeCCC--CeeEEEEEeCCC
Q 046348          279 GVGKEIPKMEGVVKIDLEKEIEVSRRFYGPSCFGGEPLFVPRNEDHLEAADEDDGFVVTYIHDEIH--EESKFLVMDAKS  356 (358)
Q Consensus       279 ~~~~~~~~~~~lvk~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~~~~~~~~EDDG~lls~v~d~~~--~~s~l~ILDA~~  356 (358)
                      ++.+. ..+++|+|+|++||+ . +.|.++++++|||||||||++    ++|||||||++|+|..+  ++|+|+||||++
T Consensus       437 ~~~~~-~~~~~l~K~D~~tg~-~-~~w~~~~~~~~EPiFVPrp~~----~~EDDG~lLs~V~d~~~~~~~s~LlILDA~~  509 (533)
T 3kvc_A          437 LGLNH-FVPDRLCKLNVKTKE-T-WVWQEPDSYPSEPIFVSHPDA----LEEDDGVVLSVVVSPGAGQKPAYLLILNAKD  509 (533)
T ss_dssp             EEEET-TEEEEEEEEETTTCC-E-EEECCTTCBCCCCEEEECTTC----CSTTCEEEEEEEECCSTTSCSEEEEEEETTT
T ss_pred             eccCC-CCCceeEEEEcCCCC-E-EEEeCCCccccCceeecCCCC----CCCCCcEEEEEEEeCCcCCCccEEEEEeCCC
Confidence            88763 467999999999998 4 467899999999999999964    79999999999999985  567999999999


Q ss_pred             CC
Q 046348          357 PI  358 (358)
Q Consensus       357 l~  358 (358)
                      |+
T Consensus       510 l~  511 (533)
T 3kvc_A          510 LS  511 (533)
T ss_dssp             CC
T ss_pred             Ch
Confidence            85

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00