Citrus Sinensis ID: 046351

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------47
MVLLETGTQLRKNSMAAVAVVVSSYCKPSPFLRRFSPKLGRSPCRHSFGRQVQSSRICALFWGTKKSVQQQVLDSSLGDFTLTGSGSEGVAENDGGPKKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVRESTQ
cEEEEccHHccccccccHHEEEccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccccEEEEEEEccccEEEEEEEEEEEEccccEEccccHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHccccEEEccccEEcccccccHHHHHHHHcHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccEEEEEEEEccEEEEEEEEEEEccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHcccEEEcccccHHHHHccccccccccEEccccccHHHHHHHHHHHHHcc
cEEEEccHHHHHccHcHHHHHEHccccccccccccccccccccccccccccccHEEEEEEEEcccccccccEccccccccEccccccccccccccccccEEEEEcccHHHccHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccccEEEEEccccEEEEEEEEEEcccccccEEEcHHHHHHHHHHcccccccEEEEcccccccccEEEccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccHccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccEEEEEEcccccEEEEEEEEccccEEcccccccccHcccccccHHHHHHHHHHHHHHccccEEccccccccHHcccccccccccHHHcccHHHHHHHHHHHHHHHcc
mvlletgtqlrKNSMAAVAVVVSsyckpspflrrfspklgrspcrhsfgrqvqssRICALFWGTKKSVQQQVLDsslgdftltgsgsegvaendggpkKICLSVISSIsevsandwdtcaldatgpekfnpflthgflssleetgcavketgwtpchivvKDECENVLGVVPLylkshsygefvfdhswadayygygeryypkfqccvpftpvtgprillrntsikDQVIDVIISAMKDLTAKSrvsslhitfpsenewhklgeKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKnttdnkwgspyltrdffhdmgskmKDQVLLVVAEDGDELVAGALNLiggdslfgrlwgchprayypslhfeACYYQAIEAAIELSLSAVEAGaqgehkiqrgylpvttYSCHYLLHEDFRKPIENFLVRESTQ
mvlletgtqlrknsmAAVAVVVSSYCKPSPFLRRFSPKLGRSPCRHSFGRQVQSSRICALFWGTKKSVQQQVLDSSLGDFTLTGSGsegvaendggpKKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRIllrntsikdqVIDVIISAMKDLTAKSRVSSLHitfpsenewhklGEKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNkrknirqerkkisaqnltmkrlrgheikakhwDSFYRFYKnttdnkwgspYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVRESTQ
MVLLETGTQLRKNSMaavavvvSSYCKPSPFLRRFSPKLGRSPCRHSFGRQVQSSRICALFWGTKKSVQQQVLDSSLGDFTLTGSGSEGVAENDGGPKKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVRESTQ
**************MAAVAVVVSSYCKPSPFLRRFSPKLGRSPCRHSFGRQVQSSRICALFWGTKKSVQQQVLDSSLGDFTL***************KKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLMD***********************KRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLV*****
*VLL***TQLRKNSMAAVAVVVSSYCK*********************************FW***************************************LSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVR****
MVLLETGTQLRKNSMAAVAVVVSSYCKPSPFLRRFSPKLGRSPCRHSFGRQVQSSRICALFWGTKKSVQQQVLDSSLGDFTLTGSGSEGVAENDGGPKKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVRESTQ
MVLLETGTQLRKNSMAAVAVVVSSYCKPSPFLRRFSPK****PCRHSFGRQVQSSRICALFWGTKKSVQQQVLDSSLGDFTLT**************KKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVRES**
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVLLETGTQLRKNSMAAVAVVVSSYCKPSPFLRRFSPKLGRSPCRHSFGRQVQSSRICALFWGTKKSVQQQVLDSSLGDFTLTGSGSEGVAENDGGPKKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLxxxxxxxxxxxxxxxxxxxxxNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVRESTQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query468
359486271475 PREDICTED: uncharacterized protein LOC10 0.967 0.953 0.770 0.0
255573874492 conserved hypothetical protein [Ricinus 0.961 0.914 0.792 0.0
449431890501 PREDICTED: uncharacterized protein LOC10 0.959 0.896 0.745 0.0
224129778433 predicted protein [Populus trichocarpa] 0.880 0.951 0.799 0.0
449478108501 PREDICTED: uncharacterized protein LOC10 0.959 0.896 0.741 0.0
15227826469 uncharacterized protein [Arabidopsis tha 0.959 0.957 0.697 0.0
297825227463 hypothetical protein ARALYDRAFT_481209 [ 0.942 0.952 0.700 0.0
357163787480 PREDICTED: uncharacterized protein LOC10 0.955 0.931 0.642 1e-174
115458562479 Os04g0442200 [Oryza sativa Japonica Grou 0.950 0.929 0.631 1e-170
218194920 577 hypothetical protein OsI_16027 [Oryza sa 0.950 0.771 0.626 1e-169
>gi|359486271|ref|XP_002268159.2| PREDICTED: uncharacterized protein LOC100262534 [Vitis vinifera] gi|297739463|emb|CBI29645.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/453 (77%), Positives = 385/453 (84%)

Query: 16  AAVAVVVSSYCKPSPFLRRFSPKLGRSPCRHSFGRQVQSSRICALFWGTKKSVQQQVLDS 75
             VAV   S  KPS FL  F    G+SP        V +SRI ALFWG KK+V+    D 
Sbjct: 3   VGVAVCYCSNLKPSSFLGHFPYHQGKSPSGQGIKNSVHASRISALFWGAKKAVEPTERDL 62

Query: 76  SLGDFTLTGSGSEGVAENDGGPKKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTH 135
           SLG+F LTGSG EGV+EN   PKKI LSV+SSI +V + DWD C +DATGPEKFNPFLTH
Sbjct: 63  SLGEFILTGSGPEGVSENQVAPKKISLSVVSSILDVPSQDWDACNMDATGPEKFNPFLTH 122

Query: 136 GFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYG 195
           GFLSSLEETGCAVKETGW P HI+ KDEC+N+LGVVPLYLKSHS GEFVFD+SWADAYY 
Sbjct: 123 GFLSSLEETGCAVKETGWMPRHIIAKDECDNILGVVPLYLKSHSSGEFVFDYSWADAYYS 182

Query: 196 YGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPS 255
           YG RYYPK QCCVPFTPVTG RIL+RN S KDQV D ++SAMKDLTAK +VSSLH+TFP+
Sbjct: 183 YGSRYYPKLQCCVPFTPVTGQRILVRNNSYKDQVFDSLVSAMKDLTAKFQVSSLHVTFPT 242

Query: 256 ENEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMK 315
           E+EW K+ EKGFLQR GMQYHW+NRNYKNFDEFLMDMKQ+KRKNIRQERKKIS QNLTMK
Sbjct: 243 ESEWDKMKEKGFLQRTGMQYHWKNRNYKNFDEFLMDMKQSKRKNIRQERKKISTQNLTMK 302

Query: 316 RLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELV 375
           RLRG+EIKAKHWDSFY+FY+NTTDNKWGSPYLTRDFFH+MGSKM+DQVLLVVAE+GDELV
Sbjct: 303 RLRGYEIKAKHWDSFYKFYRNTTDNKWGSPYLTRDFFHNMGSKMEDQVLLVVAEEGDELV 362

Query: 376 AGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQ 435
           AGALNLIGGD+LFGRLWGC PRAYYPSLHFEACYYQAIEAAIEL+L+ VEAGAQGEHKIQ
Sbjct: 363 AGALNLIGGDTLFGRLWGCLPRAYYPSLHFEACYYQAIEAAIELNLNKVEAGAQGEHKIQ 422

Query: 436 RGYLPVTTYSCHYLLHEDFRKPIENFLVRESTQ 468
           RGY+PVTTYSCHY L + F K I  FLVRE+ Q
Sbjct: 423 RGYMPVTTYSCHYFLDKGFEKAINEFLVRETAQ 455

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255573874|ref|XP_002527856.1| conserved hypothetical protein [Ricinus communis] gi|223532780|gb|EEF34559.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|449431890|ref|XP_004133733.1| PREDICTED: uncharacterized protein LOC101210646 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224129778|ref|XP_002328800.1| predicted protein [Populus trichocarpa] gi|222839098|gb|EEE77449.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449478108|ref|XP_004155225.1| PREDICTED: uncharacterized protein LOC101228401 [Cucumis sativus] Back     alignment and taxonomy information
>gi|15227826|ref|NP_179920.1| uncharacterized protein [Arabidopsis thaliana] gi|3242702|gb|AAC23754.1| hypothetical protein [Arabidopsis thaliana] gi|20453183|gb|AAM19832.1| At2g23390/F26B6.4 [Arabidopsis thaliana] gi|25090334|gb|AAN72279.1| At2g23390/F26B6.4 [Arabidopsis thaliana] gi|110742377|dbj|BAE99111.1| hypothetical protein [Arabidopsis thaliana] gi|330252356|gb|AEC07450.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297825227|ref|XP_002880496.1| hypothetical protein ARALYDRAFT_481209 [Arabidopsis lyrata subsp. lyrata] gi|297326335|gb|EFH56755.1| hypothetical protein ARALYDRAFT_481209 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357163787|ref|XP_003579846.1| PREDICTED: uncharacterized protein LOC100830579 [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|115458562|ref|NP_001052881.1| Os04g0442200 [Oryza sativa Japonica Group] gi|113564452|dbj|BAF14795.1| Os04g0442200 [Oryza sativa Japonica Group] gi|222628932|gb|EEE61064.1| hypothetical protein OsJ_14922 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|218194920|gb|EEC77347.1| hypothetical protein OsI_16027 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query468
TAIR|locus:2046847469 AT2G23390 "AT2G23390" [Arabido 0.950 0.948 0.698 1.4e-174
UNIPROTKB|Q5LM32395 SPO3732 "Uncharacterized prote 0.775 0.918 0.444 1.3e-82
TIGR_CMR|SPO_3732395 SPO_3732 "conserved hypothetic 0.775 0.918 0.444 1.3e-82
UNIPROTKB|Q0BZV9386 HNE_2289 "Putative uncharacter 0.764 0.927 0.441 1.5e-81
UNIPROTKB|Q87XT4375 PSPTO_4092 "Uncharacterized pr 0.743 0.928 0.409 8e-69
UNIPROTKB|Q607G7382 MCA1793 "Putative uncharacteri 0.752 0.921 0.371 4.2e-63
UNIPROTKB|Q488T5374 CPS_0679 "Putative uncharacter 0.747 0.935 0.377 3e-62
TIGR_CMR|CPS_0679374 CPS_0679 "conserved hypothetic 0.747 0.935 0.377 3e-62
UNIPROTKB|Q8EFL8432 SO_1953 "Uncharacterized prote 0.425 0.460 0.389 2e-53
TIGR_CMR|SO_1953432 SO_1953 "conserved hypothetica 0.425 0.460 0.389 2e-53
TAIR|locus:2046847 AT2G23390 "AT2G23390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1696 (602.1 bits), Expect = 1.4e-174, P = 1.4e-174
 Identities = 311/445 (69%), Positives = 361/445 (81%)

Query:    24 SYCKPSPFLRRFSPKLGRSPCRHSFGRQVQSSRICALFWGTKKSVQQQVLDSSLGDFTLT 83
             SYCKPSP LRRF  + G    + +     +SS + A+FW + K  + +  D SL D+TLT
Sbjct:     6 SYCKPSPPLRRFHRRCGNLWKKENVRSSRRSSSVTAMFWKSNKPAEVKEFDISLRDYTLT 65

Query:    84 GSGSEGVAENDGGPKKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEE 143
              S  E   EN    K I LSV+SSI E+   +WD CALD++ PE +NPFL++GFLSSLE+
Sbjct:    66 ESNIEEALENKPKQKVISLSVVSSIFEIPQAEWDACALDSSQPESYNPFLSYGFLSSLED 125

Query:   144 TGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPK 203
             TGCAV+ETGW P HIV KDECE++LGVVPLYLKSHSYGEFVFDHSWADAY  +G RYYPK
Sbjct:   126 TGCAVRETGWMPLHIVAKDECESILGVVPLYLKSHSYGEFVFDHSWADAYRSFGGRYYPK 185

Query:   204 FQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLG 263
              QCCVPFTPVTGPRIL+R+   K+QV D I+SAM +L +K +VSSLHITFPS  EW KL 
Sbjct:   186 LQCCVPFTPVTGPRILIRDNPCKEQVFDAIVSAMTELASKLQVSSLHITFPSGAEWDKLK 245

Query:   264 EKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIK 323
             EKGF QRIGMQYHW+NR+YKNFDEFLMDMKQ+KRKNIRQERKKI  QNL M+RL+G +IK
Sbjct:   246 EKGFSQRIGMQYHWKNRDYKNFDEFLMDMKQSKRKNIRQERKKIGTQNLKMRRLQGDDIK 305

Query:   324 AKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIG 383
             A+HWDSFY FY+NTTDNKWG+PYLTRDFFHDM SK+ D+VLLV+AE+ +E VAGALNLIG
Sbjct:   306 ARHWDSFYDFYRNTTDNKWGTPYLTRDFFHDMASKLGDKVLLVLAEENEEPVAGALNLIG 365

Query:   384 GDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTT 443
             GD+LFGRLWGC P +YYPSLHFEACYYQAIEAAIEL+L  VEAGAQGEHKIQRGYLPV T
Sbjct:   366 GDTLFGRLWGCRPDSYYPSLHFEACYYQAIEAAIELNLKTVEAGAQGEHKIQRGYLPVKT 425

Query:   444 YSCHYLLHEDFRKPIENFLVRESTQ 468
             YSCHY+  E FR+ I+ FLVRES Q
Sbjct:   426 YSCHYIFDEGFRQAIDEFLVRESNQ 450
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0009637 "response to blue light" evidence=RCA
GO:0010155 "regulation of proton transport" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
GO:0046777 "protein autophosphorylation" evidence=RCA
UNIPROTKB|Q5LM32 SPO3732 "Uncharacterized protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3732 SPO_3732 "conserved hypothetical protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q0BZV9 HNE_2289 "Putative uncharacterized protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms
UNIPROTKB|Q87XT4 PSPTO_4092 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] Back     alignment and assigned GO terms
UNIPROTKB|Q607G7 MCA1793 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)] Back     alignment and assigned GO terms
UNIPROTKB|Q488T5 CPS_0679 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_0679 CPS_0679 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EFL8 SO_1953 "Uncharacterized protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1953 SO_1953 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.86.162.1
hypothetical protein (433 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.32520001
annotation not avaliable (184 aa)
•       0.409

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query468
pfam04339370 pfam04339, DUF482, Protein of unknown function, DU 0.0
COG3146387 COG3146, COG3146, Uncharacterized protein conserve 1e-161
pfam13480144 pfam13480, Acetyltransf_6, Acetyltransferase (GNAT 8e-12
>gnl|CDD|218033 pfam04339, DUF482, Protein of unknown function, DUF482 Back     alignment and domain information 
 Score =  573 bits (1480), Expect = 0.0
 Identities = 191/359 (53%), Positives = 245/359 (68%), Gaps = 8/359 (2%)

Query: 107 SISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECEN 166
           SISE+ A DWD  A    GP+  NPFL H FLS+LEE+G     TGW P H+V+ D    
Sbjct: 1   SISEIPAADWDALA----GPDA-NPFLRHAFLSALEESGSVGPRTGWQPRHLVLWDG-GR 54

Query: 167 VLGVVPLYLKSHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIK 226
           ++   PLYLKSHSYGE+VFD +WADAY   G RYYPK    VPFTPVTGPR+L+     +
Sbjct: 55  LVAAAPLYLKSHSYGEYVFDWAWADAYERAGLRYYPKLLGAVPFTPVTGPRLLIAPGEDE 114

Query: 227 DQVIDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWRNRNYKNFD 286
             +   +++A+ +L  ++ +SSLH+ F   +E   L E GFLQR+G Q+HW NR Y +FD
Sbjct: 115 AALRAALLAALDELAEQNGLSSLHVLFVDPDEAPLLEEAGFLQRLGQQFHWFNRGYASFD 174

Query: 287 EFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPY 346
           +FL  +   KRKNIR+ER+K++ Q +T++ L G EI  +HWD+FYRFY++T   KWGSPY
Sbjct: 175 DFLAALNSRKRKNIRKERRKVAEQGITIRWLTGDEITPEHWDAFYRFYQDTYLRKWGSPY 234

Query: 347 LTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFE 406
           LTR FF  +  +M D++LLV+AE     +AGALNLIGGD+L+GR WGC     +P LHFE
Sbjct: 235 LTRAFFSLLAERMPDRILLVLAERDGRPIAGALNLIGGDTLYGRYWGC--LEEHPFLHFE 292

Query: 407 ACYYQAIEAAIELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVRE 465
           ACYYQ IE AI   L   EAGAQGEHK+ RG+LPV TYS H++ H  FR  I +FL RE
Sbjct: 293 ACYYQGIEYAIANGLQRFEAGAQGEHKLARGFLPVPTYSAHWIAHPGFRDAIADFLERE 351

This family contains several proteins of uncharacterized function. Length = 370
>gnl|CDD|225688 COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>gnl|CDD|222164 pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 468
COG3146387 Uncharacterized protein conserved in bacteria [Fun 100.0
PF04339370 DUF482: Protein of unknown function, DUF482; Inter 100.0
TIGR03019330 pepcterm_femAB FemAB-related protein, PEP-CTERM sy 100.0
PF02388406 FemAB: FemAB family; InterPro: IPR003447 The femAB 99.91
COG5653406 Protein involved in cellulose biosynthesis (CelD) 99.67
PF13480142 Acetyltransf_6: Acetyltransferase (GNAT) domain 99.66
COG2348418 Peptidoglycan interpeptide bridge formation enzyme 99.61
COG2898538 Uncharacterized conserved protein [Function unknow 98.38
PF07395264 Mig-14: Mig-14; InterPro: IPR009977 This family co 97.98
PF09924299 DUF2156: Uncharacterized conserved protein (DUF215 97.86
PRK02983 1094 lysS lysyl-tRNA synthetase; Provisional 97.84
PRK15312298 antimicrobial resistance protein Mig-14; Provision 97.64
PF03588173 Leu_Phe_trans: Leucyl/phenylalanyl-tRNA protein tr 96.18
PRK01305240 arginyl-tRNA-protein transferase; Provisional 95.93
TIGR03827266 GNAT_ablB putative beta-lysine N-acetyltransferase 95.82
PRK00301233 aat leucyl/phenylalanyl-tRNA--protein transferase; 94.91
TIGR00667185 aat leucyl/phenylalanyl-tRNA--protein transferase. 93.44
PF04377128 ATE_C: Arginine-tRNA-protein transferase, C termin 92.73
PHA00673154 acetyltransferase domain containing protein 85.1
>COG3146 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information 
Probab=100.00  E-value=1.6e-79  Score=588.48  Aligned_cols=364  Identities=47%  Similarity=0.923  Sum_probs=353.5

Q ss_pred             cceEEEEeeeeccccCcCcccccccCCCCCCCCCcchhhhhhcccccccccccccCccceeeEeecCCCceeEEEeeeee
Q 046351           97 PKKICLSVISSISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLK  176 (468)
Q Consensus        97 ~~~l~v~~~~si~~i~~~~Wd~l~~~~~~p~~~~~F~s~~wL~~~e~~~~~~~~~g~~~~~l~v~d~~G~lva~~Pl~~~  176 (468)
                      ...++|+++.+|.+|+.++||+|+..+     .|||.+|+||+.+|+++++.+++||.|+|++++|+.|+++|++|+|++
T Consensus         5 ~~~~~ir~~~~l~ei~~d~Wd~la~~~-----~~PFl~~afLs~LE~Sgsa~~~tGW~p~HLtl~d~~~~L~ga~p~YlK   79 (387)
T COG3146           5 SPDYSIRWLAALAEIPQDAWDALAGPS-----RTPFLSHAFLSALEDSGSATAKTGWLPQHLTLWDAQGTLVGAAPLYLK   79 (387)
T ss_pred             CCCceeehhhhhccCCHHHHHhhcccC-----CCcchhHHHHHHHhhcCCcccccCCCceeeEEecCCCcchhhhhhhhh
Confidence            345999999999999999999999875     689999999999999999999999999999999988999999999999


Q ss_pred             eccccceeechhhHHHHhhccccccccccccccCcccCCCeEEeecCchhHHHHHHHHHHHHHhhhhcccceeEEecCCh
Q 046351          177 SHSYGEFVFDHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFPSE  256 (468)
Q Consensus       177 ~~~~g~~~~d~~~~~~~~~~g~~~~p~ll~~~pftp~~G~~~l~~~~~~~~~~~~aL~~al~~la~~~~~~~~~l~~~~~  256 (468)
                      .+|+|+||||++|++++.+.|.+||||++|++||||++||++|++++.+.+++.++|++++.++|++.|++++++.|+++
T Consensus        80 ~HS~GEyVFDh~WAda~eraG~~YYPKll~~vPFTPvtG~RlL~~~~~d~~~~~~~L~~~l~~~~~~~glSS~Hv~F~~~  159 (387)
T COG3146          80 SHSYGEYVFDHGWADAYERAGGRYYPKLLCAVPFTPVTGPRLLARDGEDEEEVRQALLAGLDELCEQSGLSSAHVTFVDE  159 (387)
T ss_pred             cccCceeeeccHHHHHHHHhcccccchhhcCCCCCCCCCceeecCccccHHHHHHHHHHHHHHHHHhcCCCceeEecCCH
Confidence            99999999999999999999999999999999999999999999998888889999999999999999999999999999


Q ss_pred             hhhhhhcccchhhhhccceeecCCCCCChHHHHHhhhhhhhhhhHHHhccccccccccccccCccccccchhhHhhhhhc
Q 046351          257 NEWHKLGEKGFLQRIGMQYHWRNRNYKNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKN  336 (468)
Q Consensus       257 ~~~~~l~~~G~~~~~~~~~~~~~~~~~s~deyla~lssk~Rk~IRr~~Rk~~~~Gv~v~~~~~~~~~~~~ld~f~~Ly~~  336 (468)
                      ++...|+..||..+...+++|.|.++.|||+||+.|++|+||+|||++|+..+.|++|..+++.++++..++.|+..|.+
T Consensus       160 ~~~~~l~~~Gfl~r~d~qfhw~N~Gf~~fDdfL~~l~s~kRK~irrERr~v~~~Gi~i~~l~G~~lte~~wd~f~~fY~d  239 (387)
T COG3146         160 DEQPALEKAGFLHRLDQQFHWCNSGFQDFDDFLAALSSRKRKNIRRERRAVHKEGIEIQWLTGDDLTEAIWDAFFAFYMD  239 (387)
T ss_pred             HHHHHHHhccchhhcCceEEEecCCcccHHHHHHHHHHhHHHHHHHHHHHHHhcCcEEEEeeCCcCCHHHHHHHHHHHHh
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcchhhHHHHHhhhccCCeEEEEEeecCCccccccccccccccccccccccCCCccCCCcchhhhHHHHHHHH
Q 046351          337 TTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFEACYYQAIEAA  416 (468)
Q Consensus       337 t~~r~~g~~~~~~~Ff~~L~~~l~~~~~l~~a~~dg~~VA~~l~l~~g~~l~~~y~G~~~~~~~~~L~~~ll~~~~I~~A  416 (468)
                      |..+++|.||++++||..|.+.|.+++.|+.|..+|++||+++|++.+|++||+||||..  +.|+|||++|||+.|+||
T Consensus       240 T~~~~wg~pYLtr~Ff~~lge~m~~~vllv~A~r~g~~iaga~~lig~d~LYGR~WG~ie--d~p~LHFE~CYyQ~Id~a  317 (387)
T COG3146         240 TGSRKWGRPYLTRPFFSLLGERMADDVLLVMAKRGGRPIAGAFNLIGGDTLYGRYWGCIE--DHPFLHFEVCYYQAIDFA  317 (387)
T ss_pred             hcccccCCchhhHHHHHHHHHhhhhhEEEEEeccCCccceEEEEeecCceeccccccccc--cCCcchhHHHHhhHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999997  689999999999999999


Q ss_pred             HhcccccccccccccccccccccceeeeeeeeecCcchhhhhhhhhhhhcc
Q 046351          417 IELSLSAVEAGAQGEHKIQRGYLPVTTYSCHYLLHEDFRKPIENFLVREST  467 (468)
Q Consensus       417 ie~G~~~~d~G~~~e~K~~~G~~p~~~ys~~~~~~~~~~~~~~~~~~~~~~  467 (468)
                      |++|+++||.|.+|++|..||+.|+++||+||+.||.|++++.+||.||.+
T Consensus       318 I~~gl~~feaGAqGeHKlaRGf~pv~~~SaH~iahp~lr~ava~yl~~Er~  368 (387)
T COG3146         318 IAEGLQRFEAGAQGEHKLARGFPPVATYSAHWIAHPGLRQAVADYLDRERA  368 (387)
T ss_pred             HHhCCceecCCCCcchhhhcCCCcccchhhHhhcChHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999864

>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function Back     alignment and domain information
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated Back     alignment and domain information
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan [] Back     alignment and domain information
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain Back     alignment and domain information
>COG2348 Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG2898 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long) Back     alignment and domain information
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [] Back     alignment and domain information
>PRK02983 lysS lysyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK15312 antimicrobial resistance protein Mig-14; Provisional Back     alignment and domain information
>PF03588 Leu_Phe_trans: Leucyl/phenylalanyl-tRNA protein transferase; InterPro: IPR004616 Leucyl/phenylalanyl-tRNA--protein transferase 2 Back     alignment and domain information
>PRK01305 arginyl-tRNA-protein transferase; Provisional Back     alignment and domain information
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase Back     alignment and domain information
>PRK00301 aat leucyl/phenylalanyl-tRNA--protein transferase; Reviewed Back     alignment and domain information
>TIGR00667 aat leucyl/phenylalanyl-tRNA--protein transferase Back     alignment and domain information
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein Back     alignment and domain information
>PHA00673 acetyltransferase domain containing protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query468
3gkr_A336 FEMX; peptidoglycan, hexapeptide, transferase; HET 2e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
1lrz_A426 FEMA, factor essential for expression of methicill 8e-05
>3gkr_A FEMX; peptidoglycan, hexapeptide, transferase; HET: UDP UM0 UM1 UM2; 1.60A {Lactobacillus viridescens} PDB: 1ne9_A 1p4n_A* 1xix_A 1xf8_A 1xe4_A Length = 336 Back     alignment and structure
 Score = 79.4 bits (195), Expect = 2e-16
 Identities = 37/312 (11%), Positives = 90/312 (28%), Gaps = 52/312 (16%)

Query: 122 DATGPEKFNPFL-THGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSY 180
           D    E++  F+    +    ++ G A  +  W P  + ++D+   ++  + + L     
Sbjct: 8   DPQAVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPT 67

Query: 181 GEFVF-----------DHSWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQV 229
            +              D    D       +        + F P                 
Sbjct: 68  DKKFAYASKGPVMDVTDVDLLDRLVDEAVKALDGRAYVLRFDPEVAYS------------ 115

Query: 230 IDVIISAMKDLTAKSRVSSLHITFPSENEWHKLGEKGFLQRIGMQYHWR--NRNYKNFDE 287
            D   + ++D    +R                + + G    I  + +       + +   
Sbjct: 116 -DEFNTTLQDHGYVTR-------------NRNVADAGMHATIQPRLNMVLDLTKFPDAKT 161

Query: 288 FLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYL 347
            L       +  I++  +      + +             D F++ Y    +   G  + 
Sbjct: 162 TLDLYPSKTKSKIKRPFRD----GVEVHSGNSAT----ELDEFFKTYTTMAERH-GITHR 212

Query: 348 TRDFFHDM-GSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLHFE 406
             ++F  M  +   D + + VAE   +L++  + L  G  ++    G             
Sbjct: 213 PIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKYGRKIWYMYAGSMD--GNTYYAPY 270

Query: 407 ACYYQAIEAAIE 418
           A   + I+ A++
Sbjct: 271 AVQSEMIQWALD 282
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4 Length = 426 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query468
1lrz_A426 FEMA, factor essential for expression of methicill 100.0
3gkr_A336 FEMX; FEMX, peptidoglycan, hexapeptide, transferas 99.97
3tt2_A330 GCN5-related N-acetyltransferase; structural genom 97.36
2wpx_A339 ORF14; transferase, acetyl transferase, antibiotic 96.13
1p0h_A318 Hypothetical protein RV0819; GNAT fold, acetyltran 95.13
4evy_A166 Aminoglycoside N(6')-acetyltransferase type 1; cen 93.27
2cxa_A256 Leucyl/phenylalanyl-tRNA-protein transferase; amin 92.6
3fyn_A176 Integron gene cassette protein HFX_CASS3; integron 91.47
3i3g_A161 N-acetyltransferase; malaria, structural genomics, 90.91
2vez_A190 Putative glucosamine 6-phosphate acetyltransferase 88.82
3mgd_A157 Predicted acetyltransferase; structural genomics, 88.75
1s3z_A165 Aminoglycoside 6'-N-acetyltransferase; GNAT, amino 88.02
3frm_A254 Uncharacterized conserved protein; APC61048, staph 86.89
3i9s_A183 Integron cassette protein; oyster POND, woods HOLE 86.77
3t90_A149 Glucose-6-phosphate acetyltransferase 1; GNAT fold 86.35
3ld2_A197 SMU.2055, putative acetyltransferase; HET: COA; 2. 85.18
2cnt_A160 Modification of 30S ribosomal subunit protein S18; 84.54
3t9y_A150 Acetyltransferase, GNAT family; PSI-biology, struc 83.17
2pdo_A144 Acetyltransferase YPEA; alpha-beta-alpha sandwich, 82.86
2i00_A406 Acetyltransferase, GNAT family; structural genomic 82.66
3n7z_A388 Acetyltransferase, GNAT family; PSI2, MCSG, struct 82.51
2ozg_A396 GCN5-related N-acetyltransferase; YP_325469.1, ace 82.43
1qsm_A152 HPA2 histone acetyltransferase; protein-acetyl coe 81.98
1q2y_A140 Protein YJCF, similar to hypothetical proteins; GC 81.14
1vkc_A158 Putative acetyl transferase; structural genomics, 81.03
3owc_A188 Probable acetyltransferase; structural genomics, P 80.17
1bo4_A168 Protein (serratia marcescens aminoglycoside-3-N- a 80.02
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4 Back     alignment and structure
Probab=100.00  E-value=1.9e-33  Score=292.93  Aligned_cols=301  Identities=15%  Similarity=0.185  Sum_probs=216.5

Q ss_pred             ccccCcCcccccccCCCCCCCCCcchhhhhhcccccccccccccCccceeeEeecCCCceeEEEeeeeeeccccceeech
Q 046351          108 ISEVSANDWDTCALDATGPEKFNPFLTHGFLSSLEETGCAVKETGWTPCHIVVKDECENVLGVVPLYLKSHSYGEFVFDH  187 (468)
Q Consensus       108 i~~i~~~~Wd~l~~~~~~p~~~~~F~s~~wL~~~e~~~~~~~~~g~~~~~l~v~d~~G~lva~~Pl~~~~~~~g~~~~d~  187 (468)
                      +.+|++++||+++..+  | .+++||+++|..+.++       .||.++++++.+++|++||++|+++++.+.|      
T Consensus         3 ~~~i~~~ewd~fv~~~--p-~~~~~qs~~w~~~~~~-------~gw~~~~l~v~~~~g~lva~~pl~~k~~~~g------   66 (426)
T 1lrz_A            3 FTNLTAKEFGAFTDSM--P-YSHFTQTVGHYELKLA-------EGYETHLVGIKNNNNEVIAACLLTAVPVMKV------   66 (426)
T ss_dssp             EEECCHHHHHHHHHTS--T-TCCTTSSHHHHHHHHH-------TTCEEEEEEEECTTSCEEEEEEEEEEEETTT------
T ss_pred             ceeCCHHHHHHHHHhC--C-CCCcccCHHHHHHHHh-------CCCeEEEEEEEcCCCCEEEEEEEEEEecCCC------
Confidence            3567778999999987  4 3899999999886543       5899999999873389999999999875422      


Q ss_pred             hhHHHHhhccccccccccccccCcccCCCeEEeecCchhHHHHHHHHHHHHHhhhhcccceeEEecC-------------
Q 046351          188 SWADAYYGYGERYYPKFQCCVPFTPVTGPRILLRNTSIKDQVIDVIISAMKDLTAKSRVSSLHITFP-------------  254 (468)
Q Consensus       188 ~~~~~~~~~g~~~~p~ll~~~pftp~~G~~~l~~~~~~~~~~~~aL~~al~~la~~~~~~~~~l~~~-------------  254 (468)
                                     ..++.+|+    ||.  ++.  ...+.+..+++++.+++++.++..+.+...             
T Consensus        67 ---------------~~~~~~p~----GPv--~d~--~~~~~~~~~~~~l~~~~k~~~~~~l~~~P~~~~~~~~~~g~~~  123 (426)
T 1lrz_A           67 ---------------FKYFYSNR----GPV--IDY--ENQELVHFFFNELSKYVKKHRCLYLHIDPYLPYQYLNHDGEIT  123 (426)
T ss_dssp             ---------------EEEEECTT----CCE--ECT--TCHHHHHHHHHHHHHHHHTTTEEEEEECCCCEEEEECTTSCEE
T ss_pred             ---------------ceEEEeCC----CCc--cCC--CCHHHHHHHHHHHHHHHHHcCEEEEEEcCCchhhccccccccc
Confidence                           11223343    442  222  135567889999999999998876665321             


Q ss_pred             ----Chhhhhhhcccchhhh-------hccceeecC-CCC--CChHHHHHhhhhhhhhhhHHHhccccccccccccccCc
Q 046351          255 ----SENEWHKLGEKGFLQR-------IGMQYHWRN-RNY--KNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGH  320 (468)
Q Consensus       255 ----~~~~~~~l~~~G~~~~-------~~~~~~~~~-~~~--~s~deyla~lssk~Rk~IRr~~Rk~~~~Gv~v~~~~~~  320 (468)
                          .+.....|...||..+       ..++++|.. ++.  .++|++|++|+++.|++|||+.|    .||+|+.++  
T Consensus       124 ~~~~~~~~~~~l~~~G~~~~g~~~~~~~~~q~~~~~~ldL~~~~~d~ll~~~~~~~R~~Irka~k----~Gv~v~~~~--  197 (426)
T 1lrz_A          124 GNAGNDWFFDKMSNLGFEHTGFHKGFDPVLQIRYHSVLDLKDKTADDIIKNMDGLRKRNTKKVKK----NGVKVRFLS--  197 (426)
T ss_dssp             EECSCTHHHHHHHHTTCEECCCCCSCCSSSCCSEEEEEECTTCCHHHHHHTSCHHHHHHHHHHHT----SSCEEEECC--
T ss_pred             cccchHHHHHHHHHCCCEecCCcCCCCCCcccceEEEEeCCCCCHHHHHHhcCHHHHHHHHHHHH----CCcEEEEcC--
Confidence                1123455667777532       233445543 233  58999999999999999999765    899998753  


Q ss_pred             cccccchhhHhhhhhccCCCCCCCcchhhHHHHHhhhccCCeEEEEEee-------------------------------
Q 046351          321 EIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQVLLVVAE-------------------------------  369 (468)
Q Consensus       321 ~~~~~~ld~f~~Ly~~t~~r~~g~~~~~~~Ff~~L~~~l~~~~~l~~a~-------------------------------  369 (468)
                         .++++.|+++|..|++|+ +...++.+||+.|.+.+++++.+++|+                               
T Consensus       198 ---~e~l~~F~~l~~~T~~R~-g~~~~~~~yf~~l~~~~~~~~~l~lA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (426)
T 1lrz_A          198 ---EEELPIFRSFMEDTSESK-AFADRDDKFYYNRLKYYKDRVLVPLAYINFDEYIKELNEERDILNKDLNKALKDIEKR  273 (426)
T ss_dssp             ---GGGHHHHHHHC-------------CHHHHHHHHHHHGGGEECEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ---HHHHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHhccCcEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence               468999999999999886 455579999999999999988888887                               


Q ss_pred             --------------------------------cCC--ccccccccccccccccccccccCCCccCCC-cchhhhHHHHHH
Q 046351          370 --------------------------------DGD--ELVAGALNLIGGDSLFGRLWGCHPRAYYPS-LHFEACYYQAIE  414 (468)
Q Consensus       370 --------------------------------~dg--~~VA~~l~l~~g~~l~~~y~G~~~~~~~~~-L~~~ll~~~~I~  414 (468)
                                                      .+|  ++||+++++.++++++++|+|+.+  +++. .++++|+|++|+
T Consensus       274 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lAgal~~~~~~~~~y~y~gs~~--~~~~~~~~~ll~w~~i~  351 (426)
T 1lrz_A          274 PENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGNELPISAGFFFINPFEVVYYAGGTSN--AFRHFAGSYAVQWEMIN  351 (426)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEEEEEECSSCEEEEEEEECG--GGGGGCHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEEEEECCEEEEEecCchh--hHhhcCCcHHHHHHHHH
Confidence                                            567  899999999999999999988765  3443 468899999999


Q ss_pred             HHHhccccccccccc-----------ccccccccccceee-ee--eeeecCcchhhhhh
Q 046351          415 AAIELSLSAVEAGAQ-----------GEHKIQRGYLPVTT-YS--CHYLLHEDFRKPIE  459 (468)
Q Consensus       415 ~Aie~G~~~~d~G~~-----------~e~K~~~G~~p~~~-ys--~~~~~~~~~~~~~~  459 (468)
                      ||+++|+++||||+.           |.+++++|+.|... |.  |.+..+|..|.++.
T Consensus       352 ~A~~~G~~~ydf~G~~~~~~~~~~~~Gl~~FK~gFg~~~~~~~G~~~~p~~~~~y~~~~  410 (426)
T 1lrz_A          352 YALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNAEIIEYVGDFIKPINKPVYAAYT  410 (426)
T ss_dssp             HHHHTTCCEEEEEECCSCCSTTCTTHHHHHHHHTTTCEEEEECCCEEEESSHHHHHHHH
T ss_pred             HHHHcCCCEEEcCCCCCCCCCccccchHHHHhhcCCCCeEEeccceEEecCHHHHHHHH
Confidence            999999999996543           33566666665544 32  45558998887654
>3gkr_A FEMX; FEMX, peptidoglycan, hexapeptide, transferase, transferase- transferase product complex; HET: UMA; 1.60A {Lactobacillus viridescens} PDB: 1ne9_A 1p4n_A* 1xix_A 1xf8_A 1xe4_A Back     alignment and structure
>3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} Back     alignment and structure
>2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* Back     alignment and structure
>1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* Back     alignment and structure
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A Back     alignment and structure
>2cxa_A Leucyl/phenylalanyl-tRNA-protein transferase; aminoacyl-tRNA, protein degradation, structural genomics, NPPSFA; HET: MSE; 1.60A {Escherichia coli} SCOP: d.108.1.6 PDB: 2dps_A 2dpt_A* 2z3o_A* 2z3k_A* 2z3l_A* 2z3m_A* 2z3n_A* 2z3p_A* Back     alignment and structure
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} Back     alignment and structure
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A Back     alignment and structure
>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* Back     alignment and structure
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} Back     alignment and structure
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* Back     alignment and structure
>3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} Back     alignment and structure
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae} Back     alignment and structure
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} Back     alignment and structure
>3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} Back     alignment and structure
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* Back     alignment and structure
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} Back     alignment and structure
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} Back     alignment and structure
>2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Back     alignment and structure
>3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} Back     alignment and structure
>2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 Back     alignment and structure
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A Back     alignment and structure
>1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 Back     alignment and structure
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 Back     alignment and structure
>3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 468
d1lrza3182 d.108.1.4 (A:166-244,A:310-412) Methicillin resist 4e-16
d1ne9a2171 d.108.1.4 (A:165-335) Peptidyltransferase FemX {We 3e-12
>d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} Length = 182 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: FemXAB nonribosomal peptidyltransferases
domain: Methicillin resistance protein FemA
species: Staphylococcus aureus [TaxId: 1280]

 Score = 74.1 bits (181), Expect = 4e-16
 Identities = 20/131 (15%), Positives = 50/131 (38%), Gaps = 11/131 (8%)

Query: 283 KNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKW 342
           K  D+ + +M   +++N ++ +K      + ++ L   E        F  F ++T++   
Sbjct: 1   KTADDIIKNMDGLRKRNTKKVKKN----GVKVRFLSEEE-----LPIFRSFMEDTSE-SK 50

Query: 343 GSPYLTRDFFHDMGSKMKDQVLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPS 402
                   F+++     KD+VL+ +A   +  ++     I    +     G      + +
Sbjct: 51  AFADRDDKFYYNRLKYYKDRVLVPLAYINELPISAGFFFINPFEVVYYAGGTSNAFRHFA 110

Query: 403 LHFEACYYQAI 413
               A  ++ I
Sbjct: 111 -GSYAVQWEMI 120
>d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} Length = 171 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query468
d1lrza3182 Methicillin resistance protein FemA {Staphylococcu 99.84
d1ne9a2171 Peptidyltransferase FemX {Weissella viridescens [T 99.76
d1lrza2165 Methicillin resistance protein FemA {Staphylococcu 98.24
d1ne9a1164 Peptidyltransferase FemX {Weissella viridescens [T 98.17
d2cxaa1232 Leucyl/phenylalanyl-tRNA-protein transferase, LFTR 92.64
d2fe7a1156 Probable N-acetyltransferase PA0478 {Pseudomonas a 92.42
d2euia1153 Probable acetyltransferase PA4026 {Pseudomonas aer 91.3
d1bo4a_137 Aminoglycoside 3-N-acetyltransferase {Serratia mar 91.12
d2aj6a1118 Hypothetical protein MW0638 {Staphylococcus aureus 90.54
d1yx0a1151 Hypothetical protein YsnE {Bacillus subtilis [TaxI 87.0
d1z4ea1150 Transcriptional regulator BH1968 {Bacillus halodur 86.34
d1qsma_150 Histone acetyltransferase HPA2 {Baker's yeast (Sac 85.78
d1yr0a1163 Phosphinothricin acetyltransferase {Agrobacterium 85.15
d2ozga2283 Putative acetyltransferase Ava4977 {Anabaena varia 85.13
d2hv2a2285 Hypothetical protein EF1021 {Enterococcus faecalis 84.95
d2atra1137 Probable acetyltransferase SP0256 {Streptococcus p 84.59
d1mk4a_157 Hypothetical protein YqiY {Bacillus subtilis [TaxI 82.82
d2cy2a1174 Probable acetyltransferase TTHA1209 {Thermus therm 80.9
d2i00a2291 Putative acetyltransferase EF2353 {Enterococcus fa 80.14
>d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: FemXAB nonribosomal peptidyltransferases
domain: Methicillin resistance protein FemA
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.84  E-value=7.7e-22  Score=179.43  Aligned_cols=166  Identities=13%  Similarity=0.128  Sum_probs=128.6

Q ss_pred             CChHHHHHhhhhhhhhhhHHHhccccccccccccccCccccccchhhHhhhhhccCCCCCCCcchhhHHHHHhhhccCCe
Q 046351          283 KNFDEFLMDMKQNKRKNIRQERKKISAQNLTMKRLRGHEIKAKHWDSFYRFYKNTTDNKWGSPYLTRDFFHDMGSKMKDQ  362 (468)
Q Consensus       283 ~s~deyla~lssk~Rk~IRr~~Rk~~~~Gv~v~~~~~~~~~~~~ld~f~~Ly~~t~~r~~g~~~~~~~Ff~~L~~~l~~~  362 (468)
                      +|.||+|++|+++.|++|||+.|    .||+++.++     .++++.|+++|.++++|+ +.+.++.+||..+.+.++++
T Consensus         1 ks~del~~~~~~~~Rr~Irka~k----~gv~i~~~~-----~~~l~~f~~l~~~~~~r~-g~~~~~~~~~~~l~~~~~~~   70 (182)
T d1lrza3           1 KTADDIIKNMDGLRKRNTKKVKK----NGVKVRFLS-----EEELPIFRSFMEDTSESK-AFADRDDKFYYNRLKYYKDR   70 (182)
T ss_dssp             CCHHHHHHTSCHHHHHHHHHHHT----SSCEEEECC-----GGGHHHHHHHC-------------CHHHHHHHHHHHGGG
T ss_pred             CCHHHHHHhcCHHHHHHHHHHHH----CCCEEEEcC-----HHHHHHHHHHHHHHHHhc-CCCCCCHHHHHHHHHhcccc
Confidence            47899999999999999999766    799998743     357899999999999876 56678999999999999999


Q ss_pred             EEEEEeecCCccccccccccccccccccccccCCCccCCCcc-hhhhHHHHHHHHHhccccccccccc------------
Q 046351          363 VLLVVAEDGDELVAGALNLIGGDSLFGRLWGCHPRAYYPSLH-FEACYYQAIEAAIELSLSAVEAGAQ------------  429 (468)
Q Consensus       363 ~~l~~a~~dg~~VA~~l~l~~g~~l~~~y~G~~~~~~~~~L~-~~ll~~~~I~~Aie~G~~~~d~G~~------------  429 (468)
                      +.+++++.+|++||+.+++..++++++.+.|+..  ....++ .++++|++|++|+++|+++||||+.            
T Consensus        71 ~~l~~a~~~~~~ia~~l~~~~~~~~~y~~~~~~~--~~~~~~~~~ll~~~~i~~a~~~G~~~~D~gG~~~~~~~~~~~~G  148 (182)
T d1lrza3          71 VLVPLAYINELPISAGFFFINPFEVVYYAGGTSN--AFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAG  148 (182)
T ss_dssp             EECEEEEEEEEEEEEEEEEECSSCEEEEEEEECG--GGGGGCHHHHHHHHHHHHHHHTTCCEEEEEECCSCCSTTCTTHH
T ss_pred             EeeeeeecCCccEEEEEEEeechhheeeeceecc--chhhcCchHHHHHHHHHHHHHcCCcEEEecCcCCCCCCCcccch
Confidence            9999999999999999999999999876655433  233343 5688999999999999999999752            


Q ss_pred             -ccccccccccceee-eeeeeecCcchhhhhhh
Q 046351          430 -GEHKIQRGYLPVTT-YSCHYLLHEDFRKPIEN  460 (468)
Q Consensus       430 -~e~K~~~G~~p~~~-ys~~~~~~~~~~~~~~~  460 (468)
                       .+||.++|.++++. ..|.+..+|..|.++..
T Consensus       149 l~~FK~~fg~~~v~~~g~~~~~~~~~~y~~~~~  181 (182)
T d1lrza3         149 VVKFKKGYNAEIIEYVGDFIKPINKPVYAAYTA  181 (182)
T ss_dssp             HHHHHHTTTCEEEEECCCEEEESSHHHHHHHHH
T ss_pred             HHHHHHhcCCceeeecceEeeeCCHHHHHHHhh
Confidence             14899999998873 23677799999988765
>d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} Back     information, alignment and structure
>d1lrza2 d.108.1.4 (A:1-165) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1ne9a1 d.108.1.4 (A:1-164) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} Back     information, alignment and structure
>d2cxaa1 d.108.1.6 (A:1-232) Leucyl/phenylalanyl-tRNA-protein transferase, LFTR (Aat) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure