Citrus Sinensis ID: 046462

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Protein Sequence
MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQMYGDDDDYIMPEVDPTPEDSSS
Secondary Structure (PSIPRED)
cccEEEEEccccccccEEEEEEEEEEEEccccEEEEcccccEEEEEEEccccccccccEEEEcccccEEEEEEcccccccccEEEEEcccccccccEEEEEEcEEcccccEEEEEEcccccEEEEEEEEcccEEEEEEcccccEEEEEEEEcccccccEEEEcEEEEEEEcccccHHHHHHHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccccccccEEEEEEEEEEEEccccEEEEEccccEEEEEccccccccccccEEEEcccccEEEEEEcccccccccEEEEEcccccccccEEEEEEccccccccEEEEEEccccccEEEEEccccccEEEEEccccccEEEEEEEEEccccEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
msgiaivderfcfeeethltvhktsvffpgdgfivydpkgelilrfdsygpdsqpkdeLVLMEASGKCLLTLLrkkpslhqRWEGylgekmedqepifsvcrssiigrssvvahvfgepseeyriegsfsqrcCTIYNASSSKERVAKIKrkvdplnnvtlgkDVFLlclepgfdgAFAMGLVLILDQmygddddyimpevdptpedsss
Flexible Loop (DISEMBL)
msgiaivdERFCFEEETHltvhktsvffpgDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGYlgekmedqePIFSVCRSSIIGRSSVVAHVFGEPSEeyriegsfsqrCCTIYnassskervakikrkvdplnnvtLGKDVFLLCLEPGFDGAFAMGLVLILDQMYGDDDDYIMPEvdptpedsss
Low Complexity Region (SEG)
MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQMYGDDDDYIMPEVDPTPEDSSS
Disordered region (IsUnstruct)
***IAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYG*******ELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQMYGDDDDYI*************
Disordered Region (DISOPRED)
**GIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQM*********************
Disordered Region (DISEMBL)
MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQMYGDDDDYIMPEV*********
Disordered Region (DISPRO)
*SGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQMYGDD*****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQMYGDDDDYIMPEVDPTPEDSSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	210	2.2.26 [Sep-21-2011]
Q9LVZ8	220	Protein LURP-one-related	yes	no	0.885	0.845	0.595	6e-61
Q9SSC7	210	Protein LURP-one-related	no	no	0.980	0.980	0.590	2e-57
Q9ZVI6	196	Protein LURP-one-related	no	no	0.8	0.857	0.427	4e-29
A0MFL4	221	Protein LURP-one-related	no	no	0.814	0.773	0.352	4e-18
Q9LZX1	217	Protein LURP-one-related	no	no	0.895	0.866	0.285	1e-17
Q9SF24	194	Protein LURP-one-related	no	no	0.885	0.958	0.276	4e-14
A0MFH4	215	Protein LURP-one-related	no	no	0.871	0.851	0.264	4e-13
Q67XV7	217	Protein LURP-one-related	no	no	0.780	0.755	0.306	5e-13
Q8LG32	217	Protein LURP-one-related	no	no	0.780	0.755	0.306	5e-13
Q9LQ36	224	Protein LURP-one-related	no	no	0.847	0.794	0.263	1e-12

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score =  233 bits (595), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 112/188 (59%), Positives = 147/188 (78%), Gaps = 2/188 (1%)

Query: 6   IVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEAS 65
           +VD+ + ++E+  LTV KTS+F+ GDGF  YD +G++I R DSYGPD++  DE+VLM+A+
Sbjct: 20  VVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDAT 79

Query: 66  GKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRI 125
           GKCLLT+ RK+P+LHQRWEG+LGE+ E Q+PIFSV RSSIIGR ++   V+    EEY I
Sbjct: 80  GKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTGEEYII 139

Query: 126 EGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLI 185
           +G FSQR C IY+  + K  VA+IKRKVD   NV LG+DVF L ++PGFDGAFAMGLV++
Sbjct: 140 DGDFSQRSCLIYD--TKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVV 197

Query: 186 LDQMYGDD 193
           LDQ+ GDD
Sbjct: 198 LDQINGDD 205

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score =  221 bits (564), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/210 (59%), Positives = 154/210 (73%), Gaps = 4/210 (1%)

Query: 1   MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYG-PDSQPKDEL 59
           M G  +VD+ F   EE  LTV KTS+FF GDGF VYD KG L+ R DSYG P+++  DE+
Sbjct: 1   MKGGLLVDDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEV 60

Query: 60  VLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGE- 118
           VLM+A G+CLLTL RK+PSL +RWEGYLGE+ + Q+PIF V RSSIIGR+SV   V+G+ 
Sbjct: 61  VLMDAHGRCLLTLRRKRPSLRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVYGDY 120

Query: 119 PSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAF 178
              EY IEGSF  R CT+  A  ++ +VA+I+RKVD   NV LGKDVF L ++PGFDGAF
Sbjct: 121 QCSEYLIEGSFGARNCTVVEA-ETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAF 179

Query: 179 AMGLVLILDQMYGDDDDYIMPE-VDPTPED 207
           AMGLVL+LDQ+YGDD   +  E V P+ ED
Sbjct: 180 AMGLVLVLDQIYGDDLLEVGEEQVHPSAED 209

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640 PE=2 SV=1

 Score =  127 bits (320), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 105/173 (60%), Gaps = 5/173 (2%)

Query: 19  LTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPS 78
           LTV K S+ F  DGF VY+  GEL+ R D+Y   + P+D +VLM+ASG  LL++ RKK S
Sbjct: 25  LTVWKKSLLFNCDGFTVYNANGELVFRVDNYM--NCPRDNIVLMDASGFPLLSIRRKKLS 82

Query: 79  LHQRWEGYLGEKMEDQEPIFSVCRS-SIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIY 137
           L   W  Y GE   +++PIF+  ++ SII     +A V  + +  Y IEGS+ QR C I 
Sbjct: 83  LGDCWMVYDGE--TERDPIFTARKNVSIISNRKSLAWVSAKKTVLYEIEGSYGQRSCKIL 140

Query: 138 NASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQMY 190
           +   +K++ A+IKRK   +  V  GKDV+ L +E   +   AM L +ILDQM+
Sbjct: 141 DERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQMF 193

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|A0MFL4|LOR17_ARATH Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590 PE=2 SV=2

 Score = 91.7 bits (226), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 16/187 (8%)

Query: 17  THLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLR-K 75
           T LTV + S+    +GF V D  G+LI R D+Y   ++P +EL+LM+  G  LL + R K
Sbjct: 37  TTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYAR-TRP-EELILMDKDGNSLLLMHRTK 94

Query: 76  KPSLHQRWEGY-----LGEKMEDQEPIFSVCRSSIIG----RSSVVAHVFG---EPSEEY 123
           K +L   W  Y      GE    + P + + ++  +     +S ++A+V+    +    Y
Sbjct: 95  KITLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFDKKNSY 154

Query: 124 RIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLV 183
            I+GS+  + C I +   +K  V +IKRK      V  G DVF L + PGFD   AM LV
Sbjct: 155 IIKGSYRCKSCKIVHVPLNKT-VVEIKRKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALV 213

Query: 184 LILDQMY 190
           L+LDQM+
Sbjct: 214 LLLDQMF 220

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 2   SGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVL 61
           +G  +VD ++C      + + +  +      F++ D  G L+ +     P     D+ VL
Sbjct: 23  AGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRVL 80

Query: 62  MEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSE 121
           ++ SG  ++TL  K  S+H RW+ + G   + ++ +++V RSS++   + +    G   +
Sbjct: 81  LDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKD 140

Query: 122 E----YRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGA 177
           E    +R++GS+ +R C +Y A  S   VA++ RK   + +V LGKD F + + P  D A
Sbjct: 141 EKRCDFRVKGSWLERSCVVY-AGESDAIVAQMHRK-HTVQSVFLGKDNFSVTVYPNVDYA 198

Query: 178 FAMGLVLILDQMYGDD 193
           F   LV+ILD +  +D
Sbjct: 199 FIASLVVILDDVNRED 214

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 9/195 (4%)

Query: 4   IAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLME 63
           +AIV   FC      L + +  +      F V D  G L+ +     P     D+ +L++
Sbjct: 1   MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKE--PLFSISDKRILLD 58

Query: 64  ASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEE- 122
           A    +LTL   K SLH RW  Y G+  +  + ++++ RSS+I        +F   ++E 
Sbjct: 59  AYDTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEM 118

Query: 123 ----YRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAF 178
               + ++GS+  R C +Y A  S   VA++ +K     ++ +GK  F + + P  D AF
Sbjct: 119 KICDFHVKGSWIDRSCVVY-AGKSDAIVAQMHKK-HTAQSILIGKSNFSVTVYPNVDFAF 176

Query: 179 AMGLVLILDQMYGDD 193
            + L++ILD +  +D
Sbjct: 177 IVSLIVILDDINRED 191

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|A0MFH4|LOR16_ARATH Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 21/204 (10%)

Query: 6   IVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEAS 65
           ++  R+  E ET L V +      G GF+V + K  ++ R D  G     K +L+L    
Sbjct: 12  VLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLG-TKGKLLLRNGD 70

Query: 66  GKCLLTLLRKKPSL-------HQRWEGYLGEKMEDQEPIFSVCR---SSIIGRSSVVAHV 115
           G  LL L+RK   +       H +WEG+  +    +  +F++     S ++  SS+   V
Sbjct: 71  GNDLL-LIRKMGGIVQALNMVHNKWEGFGYDNEGTERLVFTLKDPKDSCLVQNSSIKILV 129

Query: 116 FGEP-------SEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLL 168
            G+P       +    I+GSF++R C I ++        +I+++++ +  V   KD++ +
Sbjct: 130 HGKPPKISSTRNNYVEIKGSFAERACNIMDSDGKAIAKVRIEKEMEEM--VGNKKDLYHV 187

Query: 169 CLEPGFDGAFAMGLVLILDQMYGD 192
            ++P  D +F +GL+ ILD ++G+
Sbjct: 188 IVKPNVDQSFIVGLIAILDYIHGE 211

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q67XV7|LOR3_ARATH Protein LURP-one-related 3 OS=Arabidopsis thaliana GN=At1g53890 PE=2 SV=2

 Score = 74.3 bits (181), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 19/183 (10%)

Query: 11  FCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLL 70
           +   E+   T+   S+ F   G  V+D KG LI R D+Y   S   +E+  M+ +GK L 
Sbjct: 36  YLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSWS-NEVYFMDLNGKILF 94

Query: 71  TLLRKKPSLHQRWEGY--LGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGS 128
           TL +KK    + WEGY   G +   ++    + R S    SS    V G      RI   
Sbjct: 95  TLRQKKLGFFKSWEGYNSTGTRFRLRKIFKILPRES----SSSYKVVMGS-----RIVDG 145

Query: 129 FSQRCCTIYNASS-------SKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMG 181
             Q C  I N  S       S   +A++K K+  ++ + LG DV  + +EP  D +  MG
Sbjct: 146 DQQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMG 205

Query: 182 LVL 184
           +V+
Sbjct: 206 IVI 208

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LG32|LOR2_ARATH Protein LURP-one-related 2 OS=Arabidopsis thaliana GN=At1g53870 PE=2 SV=2

 Score = 74.3 bits (181), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 19/183 (10%)

Query: 11  FCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLL 70
           +   E+   T+   S+ F   G  V+D KG LI R D+Y   S   +E+  M+ +GK L 
Sbjct: 36  YLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSWS-NEVYFMDLNGKILF 94

Query: 71  TLLRKKPSLHQRWEGY--LGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGS 128
           TL +KK    + WEGY   G +   ++    + R S    SS    V G      RI   
Sbjct: 95  TLRQKKLGFFKSWEGYNSTGTRFRLRKIFKILPRES----SSSYKVVMGS-----RIVDG 145

Query: 129 FSQRCCTIYNASS-------SKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMG 181
             Q C  I N  S       S   +A++K K+  ++ + LG DV  + +EP  D +  MG
Sbjct: 146 DQQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMG 205

Query: 182 LVL 184
           +V+
Sbjct: 206 IVI 208

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 5   AIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEA 64
            IVD ++C      L + +  +      F++ + +G L+  F    P     ++ +LM+ 
Sbjct: 26  VIVDPKYCSLHPVDLAIVRKVLKITDGNFVITNAEGNLL--FKVKDPFFSLHEKRILMDG 83

Query: 65  SGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEE-- 122
            G  +LTL  K  ++H RW  + G   E+ + +++V RS+++  ++ +     +  E+  
Sbjct: 84  FGTKVLTLKGKIMTMHDRWLVFRGGSTEEVDLLYTVKRSNMVQITTKLDVFLADNIEQKK 143

Query: 123 --YRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAM 180
             YR+EG + +  C +Y A  S   +A+++ K   + +V  GKD F L + P  D AF  
Sbjct: 144 CDYRLEGVWLETSCFVY-AGDSDIILAQMREK-KTMQSVLFGKDNFCLTVNPNVDYAFIA 201

Query: 181 GLVLIL 186
            L++IL
Sbjct: 202 SLIVIL 207

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
224087114	210	predicted protein [Populus trichocarpa]	0.971	0.971	0.730	7e-83
255572505	218	conserved hypothetical protein [Ricinus	0.995	0.958	0.675	1e-77
147838908	207	hypothetical protein VITISV_034997 [Viti	0.980	0.995	0.626	2e-69
225442951	207	PREDICTED: protein LURP-one-related 12 [	0.980	0.995	0.622	1e-68
449436144	206	PREDICTED: protein LURP-one-related 12-l	0.957	0.975	0.625	3e-67
224054420	201	predicted protein [Populus trichocarpa]	0.957	1.0	0.628	6e-67
255553189	206	GTP binding protein, putative [Ricinus c	0.976	0.995	0.615	9e-67
224134504	205	predicted protein [Populus trichocarpa]	0.976	1.0	0.618	1e-65
356519327	219	PREDICTED: protein LURP-one-related 12-l	0.952	0.913	0.618	4e-65
351725395	219	uncharacterized protein LOC100527456 [Gl	0.928	0.890	0.600	2e-64

>gi|224087114|ref|XP_002308070.1| predicted protein [Populus trichocarpa] gi|222854046|gb|EEE91593.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 152/208 (73%), Positives = 176/208 (84%), Gaps = 4/208 (1%)

Query: 6   IVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEAS 65
           +VDE+FCF+E T+LTVHKTSVFFPGDGFIVYDP  E+I RFDSYGPDS+PKDELVLM+A 
Sbjct: 2   MVDEKFCFKEATNLTVHKTSVFFPGDGFIVYDPNREIIFRFDSYGPDSEPKDELVLMDAG 61

Query: 66  GKCLLTLLRKKPSLHQRWEGYLGEKMED-QEPIFSVCRSSIIGRSSVVAHVFGEPSEEYR 124
           GK LLTL RKKPSLHQRWEG+LGE+ ED QEP+FSVCRSSIIGRS+++  VFG+P EEY 
Sbjct: 62  GKGLLTLRRKKPSLHQRWEGFLGEREEDHQEPVFSVCRSSIIGRSNLIVQVFGDPGEEYH 121

Query: 125 IEGSFSQRCCTIYNAS---SSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMG 181
           I GS+SQRCCTI+N S   SSK+ VA IKRKVDP  +V LGKDVF LC+ PGFDGAFAMG
Sbjct: 122 IRGSYSQRCCTIFNTSSENSSKDPVAVIKRKVDPSTHVMLGKDVFWLCVRPGFDGAFAMG 181

Query: 182 LVLILDQMYGDDDDYIMPEVDPTPEDSS 209
           LVL+LDQMYGD+ D  + + DPT +D S
Sbjct: 182 LVLVLDQMYGDNADGDVQDADPTSKDFS 209

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572505|ref|XP_002527187.1| conserved hypothetical protein [Ricinus communis] gi|223533452|gb|EEF35200.1| conserved hypothetical protein [Ricinus communis]

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 146/216 (67%), Positives = 175/216 (81%), Gaps = 7/216 (3%)

Query: 1   MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELV 60
           M+G A+VDE+FCF+ E  LTV KTSVF+PGD F+VYDP+GE+I RFDSYGP+SQPKDELV
Sbjct: 1   MTGGAVVDEKFCFKVEIDLTVRKTSVFYPGDAFLVYDPQGEIIFRFDSYGPESQPKDELV 60

Query: 61  LMEASGKCLLTLLRKKPSLHQRWEGYLGEKME--DQEPIFSVCRSSIIGRSSVVAHVFGE 118
           LM+ASGKCLL+LLRKKPSLHQRW+GYLGE+ E   Q+PIFSV +S+IIGRSS+V  V G+
Sbjct: 61  LMDASGKCLLSLLRKKPSLHQRWDGYLGERNEANHQDPIFSVSKSTIIGRSSLVVEVCGD 120

Query: 119 PSEEYRIEGSFSQRCCTIYNAS-----SSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPG 173
           P EEY+IEG++S+R C IYN +     SSK+ VA+IKRKVDP   V LGKDVF L ++PG
Sbjct: 121 PGEEYQIEGNYSRRRCMIYNTTSLEDPSSKDPVAEIKRKVDPTTKVMLGKDVFWLRVKPG 180

Query: 174 FDGAFAMGLVLILDQMYGDDDDYIMPEVDPTPEDSS 209
            D AFAMGLVLILDQMYGD DD    +VDP  +D S
Sbjct: 181 LDAAFAMGLVLILDQMYGDSDDSNADDVDPNIDDIS 216

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838908|emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera]

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/209 (62%), Positives = 163/209 (77%), Gaps = 3/209 (1%)

Query: 1   MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELV 60
           M   A+V+E F +EEE  LTV KTS+FF GDGF VYDPKG L+ R DSY PD++ K EL+
Sbjct: 1   MKAGAVVEEGFIYEEEIQLTVFKTSLFFTGDGFTVYDPKGTLVFRVDSYEPDARDKGELI 60

Query: 61  LMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPS 120
           LM+ASG+CLLT+ RK+PSLHQRWEG+LGE ++ ++PIFSV RSSIIGRS V   ++  P 
Sbjct: 61  LMDASGRCLLTVRRKRPSLHQRWEGFLGEGIDGKKPIFSVKRSSIIGRSGVTVEMYSNPG 120

Query: 121 EEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAM 180
           E+Y+IEGSFS RCCTI+NA  +KE VA+I+RKVD   +V LGKDVF LCL+PGFDGAFAM
Sbjct: 121 EDYQIEGSFSHRCCTIFNA--TKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFDGAFAM 178

Query: 181 GLVLILDQMYGDDDDYIMPEVDPTPEDSS 209
           GLVL+LDQ+  D +D  + +VDP   D S
Sbjct: 179 GLVLVLDQISDDYEDDGL-QVDPAANDLS 206

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442951|ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Vitis vinifera] gi|297743462|emb|CBI36329.3| unnamed protein product [Vitis vinifera]

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 130/209 (62%), Positives = 162/209 (77%), Gaps = 3/209 (1%)

Query: 1   MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELV 60
           M   A+V+E F +EEE  LTV KTS+FF GDGF VYDPKG L+ R DSY PD++ K EL+
Sbjct: 1   MKAGAVVEEGFIYEEEIQLTVFKTSLFFTGDGFTVYDPKGTLVFRVDSYEPDARDKGELI 60

Query: 61  LMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPS 120
           LM+ASG+CLLT+ RK+PSLHQRWEG+LGE ++ ++PIFSV RSSIIGRS V   ++  P 
Sbjct: 61  LMDASGRCLLTVRRKRPSLHQRWEGFLGEGIDGKKPIFSVKRSSIIGRSGVTVEMYSNPG 120

Query: 121 EEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAM 180
           E+Y+IEGSFS RCCTI+NA  +KE VA+I+RKVD   +V LGKDVF LCL+PGF GAFAM
Sbjct: 121 EDYQIEGSFSHRCCTIFNA--AKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFGGAFAM 178

Query: 181 GLVLILDQMYGDDDDYIMPEVDPTPEDSS 209
           GLVL+LDQ+  D +D  + +VDP   D S
Sbjct: 179 GLVLVLDQISDDYEDDGL-QVDPAANDLS 206

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436144|ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus] gi|449509285|ref|XP_004163545.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus]

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 127/203 (62%), Positives = 157/203 (77%), Gaps = 2/203 (0%)

Query: 5   AIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEA 64
            IV+E F ++E+ HLTV KTS+FF GDG+ VYD KGEL+ R DSYGPD++ KDE+VLM+A
Sbjct: 6   VIVEEAFVYDEDKHLTVMKTSLFFAGDGYTVYDCKGELLFRVDSYGPDARDKDEIVLMDA 65

Query: 65  SGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYR 124
            GKCLLT+ RK+PSLH RWEG+LGE+ E Q+PIF+V RSSIIGRSS+   V  +  +EY 
Sbjct: 66  QGKCLLTVRRKRPSLHHRWEGFLGERTEGQKPIFNVRRSSIIGRSSMTVEVLKDSGDEYH 125

Query: 125 IEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVL 184
           IEG F  R CTI++A  +KE VA+IKRKVD   NV LGKDVF L ++PGFDGAFAMGLVL
Sbjct: 126 IEGCFGNRHCTIFDA--AKEAVAEIKRKVDATTNVVLGKDVFSLIIKPGFDGAFAMGLVL 183

Query: 185 ILDQMYGDDDDYIMPEVDPTPED 207
           +LDQ+ GD  D    E+DPT +D
Sbjct: 184 VLDQINGDSFDDEDTEMDPTADD 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054420|ref|XP_002298251.1| predicted protein [Populus trichocarpa] gi|222845509|gb|EEE83056.1| predicted protein [Populus trichocarpa]

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 130/207 (62%), Positives = 156/207 (75%), Gaps = 6/207 (2%)

Query: 1   MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELV 60
           M G  IVD+ F +EEE  LTV KTS+FF  DGF VYD KGEL+ R +SYGPD++ + E+V
Sbjct: 1   MKGGLIVDDGFIYEEEKLLTVLKTSLFFANDGFTVYDCKGELVFRVESYGPDTRDQGEIV 60

Query: 61  LMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPS 120
           LM+A G+CLLT+ RK+PSLHQRWEGY+GE  +   PIFSV RSSIIGR SV   V+G+P 
Sbjct: 61  LMDAHGRCLLTVRRKRPSLHQRWEGYIGEGTDGNRPIFSVRRSSIIGRCSVTVEVYGKPG 120

Query: 121 EEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAM 180
            EY+IEGSF+ R CTI+NA   KE +A+I+RKVD   NV LGKDVF LCL+PGFDGAFAM
Sbjct: 121 AEYQIEGSFANRSCTIFNA--EKESMAEIRRKVDASTNVLLGKDVFSLCLKPGFDGAFAM 178

Query: 181 GLVLILDQMYGDDDDYIMPEVDPTPED 207
           GLVLILDQ+ GDD      +  PT ED
Sbjct: 179 GLVLILDQITGDD----AVDGHPTTED 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553189|ref|XP_002517637.1| GTP binding protein, putative [Ricinus communis] gi|223543269|gb|EEF44801.1| GTP binding protein, putative [Ricinus communis]

 Score =  258 bits (660), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 128/208 (61%), Positives = 157/208 (75%), Gaps = 3/208 (1%)

Query: 1   MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYG-PDSQPKDEL 59
           M    IVD  + ++EE HLTV KTS+FF  DGF VYD +GEL+ R DSYG PD++   E+
Sbjct: 1   MKAGLIVDSGYIYQEEKHLTVLKTSLFFANDGFTVYDCRGELVFRVDSYGGPDNRETAEV 60

Query: 60  VLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEP 119
           VLM+A+G+CLLT+ +K+PSLH RWEGYLGE+ E Q+P+FSV RSSIIGR SV   V+G P
Sbjct: 61  VLMDANGRCLLTVRKKRPSLHHRWEGYLGERSEGQKPVFSVRRSSIIGRCSVAVEVYGNP 120

Query: 120 SEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFA 179
            EEY+IEGSF+ R CT +NA   KE VA+I+RKVD   +V LGKDVF LCL+PGFDGAFA
Sbjct: 121 GEEYQIEGSFANRSCTFFNA--VKESVAEIRRKVDTSTHVVLGKDVFSLCLKPGFDGAFA 178

Query: 180 MGLVLILDQMYGDDDDYIMPEVDPTPED 207
           MGLVL+LDQ+ GDD      EV PT E+
Sbjct: 179 MGLVLVLDQINGDDYVEDESEVSPTAEE 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134504|ref|XP_002327421.1| predicted protein [Populus trichocarpa] gi|118487735|gb|ABK95691.1| unknown [Populus trichocarpa] gi|222835975|gb|EEE74396.1| predicted protein [Populus trichocarpa]

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 128/207 (61%), Positives = 152/207 (73%), Gaps = 2/207 (0%)

Query: 1   MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELV 60
           M G  +VD+ F +EEE HLTV KT +FF  DGF VYD KGEL+ R DSYGPDS+ K ELV
Sbjct: 1   MKGGLVVDDGFVYEEEKHLTVFKTCLFFANDGFTVYDCKGELVFRVDSYGPDSRDKGELV 60

Query: 61  LMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPS 120
           LM+A G+CLLT+ RK+PSLHQRWEGY+GE  +   PIFSV R+S+IGR +V   V G P 
Sbjct: 61  LMDAHGRCLLTVRRKRPSLHQRWEGYIGEGTDGSNPIFSVRRTSMIGRCTVTVEVCGNPG 120

Query: 121 EEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAM 180
           EEY+IEGSF+ R CTI N  + KE VA+I+RKVD   +V LGKDV  LCL+PGFDGAFAM
Sbjct: 121 EEYQIEGSFATRSCTILN--TVKEAVAEIRRKVDASTDVVLGKDVLSLCLKPGFDGAFAM 178

Query: 181 GLVLILDQMYGDDDDYIMPEVDPTPED 207
           GLVLILDQ+ G D      +  PT ED
Sbjct: 179 GLVLILDQINGYDSVENEVKESPTTED 205

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519327|ref|XP_003528324.1| PREDICTED: protein LURP-one-related 12-like [Glycine max]

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 128/207 (61%), Positives = 156/207 (75%), Gaps = 7/207 (3%)

Query: 6   IVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEAS 65
           +V+E + F+EETH TV KTS+FF GDGF VYD KG+L+ RFDSYGP ++ KDELVLM+  
Sbjct: 6   VVEEGYLFKEETHFTVLKTSLFFNGDGFAVYDCKGQLVFRFDSYGPRARDKDELVLMDPH 65

Query: 66  GKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRS--SVVAHVFGEPSEEY 123
           G+ LLTL RKKPSLHQRWEG+ GE+ E  +PIFSV RSSIIGRS  SV   V+  P  EY
Sbjct: 66  GRSLLTLRRKKPSLHQRWEGFKGERTEGHKPIFSVKRSSIIGRSRTSVAVEVYDSPGVEY 125

Query: 124 RIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLV 183
            IEG F QRCC ++NA  +KE VA+I+RKVDP  +V LGK+VF LC++PGFD AFAMGLV
Sbjct: 126 LIEGCFPQRCCKVFNA--AKELVAEIRRKVDPTTSVMLGKEVFWLCVKPGFDAAFAMGLV 183

Query: 184 LILDQMYGD---DDDYIMPEVDPTPED 207
           L+LDQ+ G+   DD  + P V P  ED
Sbjct: 184 LVLDQINGENYFDDRILEPSVHPAAED 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725395|ref|NP_001236323.1| uncharacterized protein LOC100527456 [Glycine max] gi|255632396|gb|ACU16548.1| unknown [Glycine max]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 122/203 (60%), Positives = 157/203 (77%), Gaps = 8/203 (3%)

Query: 11  FCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLL 70
           + F+EE HLTV KTS+FF GDGF VYD KG+L+ R DSYGPD++ +DELVLM+ +G+CLL
Sbjct: 19  YVFKEEIHLTVFKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGRCLL 78

Query: 71  TLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRS--SVVAHVFGEPSEEYRIEGS 128
           T+ RK+PSLHQRWEG+ GE+M+  +PIFSV R+SIIGRS  S+   ++  P EEY+I+G 
Sbjct: 79  TVRRKRPSLHQRWEGFKGERMDGDKPIFSVRRASIIGRSRASLTVEMYDNPGEEYQIDGC 138

Query: 129 FSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQ 188
           FSQRCCT++N   +KE VA+I+RKVDP  +V LGK+VF LC++PGFD AFAMG VL+LDQ
Sbjct: 139 FSQRCCTVFNV--TKESVAEIRRKVDPTTSVVLGKEVFSLCVKPGFDAAFAMGFVLVLDQ 196

Query: 189 MYGDD--DDYIM--PEVDPTPED 207
           + G+D  DD     P V P  ED
Sbjct: 197 INGEDYVDDRATTEPAVHPATED 219

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.980	0.980	0.590	9.3e-59
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.952	0.909	0.581	4e-58
TAIR|locus:2064179	196	AT2G38640 "AT2G38640" [Arabido	0.8	0.857	0.427	3.9e-28
TAIR|locus:2160427	221	AT5G41590 "AT5G41590" [Arabido	0.814	0.773	0.358	5.1e-19
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.895	0.866	0.285	8.3e-19
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.895	0.969	0.274	9.8e-16
TAIR|locus:2180459	215	AT5G20640 "AT5G20640" [Arabido	0.866	0.846	0.287	8.8e-15
TAIR|locus:2064686	191	AT2G05910 "AT2G05910" [Arabido	0.842	0.926	0.260	1.4e-14
TAIR|locus:2197036	217	AT1G53870 "AT1G53870" [Arabido	0.757	0.732	0.322	3.8e-14
TAIR|locus:2091040	230	AT3G14260 "AT3G14260" [Arabido	0.776	0.708	0.313	1.5e-12

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 124/210 (59%), Positives = 154/210 (73%)

Query:     1 MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYG-PDSQPKDEL 59
             M G  +VD+ F   EE  LTV KTS+FF GDGF VYD KG L+ R DSYG P+++  DE+
Sbjct:     1 MKGGLLVDDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEV 60

Query:    60 VLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGE- 118
             VLM+A G+CLLTL RK+PSL +RWEGYLGE+ + Q+PIF V RSSIIGR+SV   V+G+ 
Sbjct:    61 VLMDAHGRCLLTLRRKRPSLRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVYGDY 120

Query:   119 PSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAF 178
                EY IEGSF  R CT+  A + + +VA+I+RKVD   NV LGKDVF L ++PGFDGAF
Sbjct:   121 QCSEYLIEGSFGARNCTVVEAET-RRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAF 179

Query:   179 AMGLVLILDQMYGDDDDYIMPE-VDPTPED 207
             AMGLVL+LDQ+YGDD   +  E V P+ ED
Sbjct:   180 AMGLVLVLDQIYGDDLLEVGEEQVHPSAED 209

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
 Identities = 118/203 (58%), Positives = 153/203 (75%)

Query:     6 IVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEAS 65
             +VD+ + ++E+  LTV KTS+F+ GDGF  YD +G++I R DSYGPD++  DE+VLM+A+
Sbjct:    20 VVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDAT 79

Query:    66 GKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRI 125
             GKCLLT+ RK+P+LHQRWEG+LGE+ E Q+PIFSV RSSIIGR ++   V+    EEY I
Sbjct:    80 GKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTGEEYII 139

Query:   126 EGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLI 185
             +G FSQR C IY+  + K  VA+IKRKVD   NV LG+DVF L ++PGFDGAFAMGLV++
Sbjct:   140 DGDFSQRSCLIYD--TKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVV 197

Query:   186 LDQMYGDDDDYIMPE-VDPTPED 207
             LDQ+ GDD   I  E V P  ED
Sbjct:   198 LDQINGDDPVEIGDEQVHPFVED 220

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064179 AT2G38640 "AT2G38640" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 74/173 (42%), Positives = 105/173 (60%)

Query:    19 LTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPS 78
             LTV K S+ F  DGF VY+  GEL+ R D+Y   + P+D +VLM+ASG  LL++ RKK S
Sbjct:    25 LTVWKKSLLFNCDGFTVYNANGELVFRVDNYM--NCPRDNIVLMDASGFPLLSIRRKKLS 82

Query:    79 LHQRWEGYLGEKMEDQEPIFSVCRS-SIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIY 137
             L   W  Y GE   +++PIF+  ++ SII     +A V  + +  Y IEGS+ QR C I 
Sbjct:    83 LGDCWMVYDGET--ERDPIFTARKNVSIISNRKSLAWVSAKKTVLYEIEGSYGQRSCKIL 140

Query:   138 NASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQMY 190
             +   +K++ A+IKRK   +  V  GKDV+ L +E   +   AM L +ILDQM+
Sbjct:   141 DERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQMF 193

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2160427 AT5G41590 "AT5G41590" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 67/187 (35%), Positives = 101/187 (54%)

Query:    17 THLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLR-K 75
             T LTV + S+    +GF V D  G+LI R D+Y   ++P +EL+LM+  G  LL + R K
Sbjct:    37 TTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYAR-TRP-EELILMDKDGNSLLLMHRTK 94

Query:    76 KPSLHQRWEGY-----LGEKMEDQEPIFSVCRS---SIIG-RSSVVAHVFG---EPSEEY 123
             K +L   W  Y      GE    + P + + ++   +I+  +S ++A+V+    +    Y
Sbjct:    95 KITLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFDKKNSY 154

Query:   124 RIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLV 183
              I+GS+  + C I +   +K  V +IKRK      V  G DVF L + PGFD   AM LV
Sbjct:   155 IIKGSYRCKSCKIVHVPLNKT-VVEIKRKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALV 213

Query:   184 LILDQMY 190
             L+LDQM+
Sbjct:   214 LLLDQMF 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 56/196 (28%), Positives = 102/196 (52%)

Query:     2 SGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVL 61
             +G  +VD ++C      + + +  +      F++ D  G L+ +     P     D+ VL
Sbjct:    23 AGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRVL 80

Query:    62 MEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSE 121
             ++ SG  ++TL  K  S+H RW+ + G   + ++ +++V RSS++   + +    G   +
Sbjct:    81 LDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKD 140

Query:   122 E----YRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGA 177
             E    +R++GS+ +R C +Y A  S   VA++ RK   + +V LGKD F + + P  D A
Sbjct:   141 EKRCDFRVKGSWLERSCVVY-AGESDAIVAQMHRK-HTVQSVFLGKDNFSVTVYPNVDYA 198

Query:   178 FAMGLVLILDQMYGDD 193
             F   LV+ILD +  +D
Sbjct:   199 FIASLVVILDDVNRED 214

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 54/197 (27%), Positives = 95/197 (48%)

Query:     4 IAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLME 63
             +AIV   FC      L + +  +      F V D  G L+ +     P     D+ +L++
Sbjct:     1 MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKE--PLFSISDKRILLD 58

Query:    64 ASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEE- 122
             A    +LTL   K SLH RW  Y G+  +  + ++++ RSS+I        +F   ++E 
Sbjct:    59 AYDTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEM 118

Query:   123 ----YRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAF 178
                 + ++GS+  R C +Y A  S   VA++ +K     ++ +GK  F + + P  D AF
Sbjct:   119 KICDFHVKGSWIDRSCVVY-AGKSDAIVAQMHKK-HTAQSILIGKSNFSVTVYPNVDFAF 176

Query:   179 AMGLVLILDQMYGDDDD 195
              + L++ILD +  +D +
Sbjct:   177 IVSLIVILDDINREDSE 193

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180459 AT5G20640 "AT5G20640" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 59/205 (28%), Positives = 101/205 (49%)

Query:     6 IVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEAS 65
             ++  R+  E ET L V +      G GF+V + K  ++ R D  G     K +L+L    
Sbjct:    12 VLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGT-KGKLLLRNGD 70

Query:    66 GKCLLTLLRKKPSL-------HQRWEGYLGEKMEDQEPIFSVCR----SSIIGRSSVVAH 114
             G  LL L+RK   +       H +WEG+ G   E  E +    +    S ++  SS+   
Sbjct:    71 GNDLL-LIRKMGGIVQALNMVHNKWEGF-GYDNEGTERLVFTLKDPKDSCLVQNSSIKIL 128

Query:   115 VFGEPSE------EY-RIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFL 167
             V G+P +       Y  I+GSF++R C I +  S  + +AK++ + +    V   KD++ 
Sbjct:   129 VHGKPPKISSTRNNYVEIKGSFAERACNIMD--SDGKAIAKVRIEKEMEEMVGNKKDLYH 186

Query:   168 LCLEPGFDGAFAMGLVLILDQMYGD 192
             + ++P  D +F +GL+ ILD ++G+
Sbjct:   187 VIVKPNVDQSFIVGLIAILDYIHGE 211

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2064686 AT2G05910 "AT2G05910" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 51/196 (26%), Positives = 97/196 (49%)

Query:     5 AIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEA 64
             A+V + +C   E  + V +      G GF+V D K +++ + D  G     K ELVL ++
Sbjct:     3 AVVSKLYCSSMEEVMVVRRRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGT-KGELVLRDS 61

Query:    65 SGKCLLTLLRKKP------SLHQRWEGYLGEKMEDQEPIFSVC--RSSIIGRSSVVAHVF 116
              G  LL L+ KK       S+H +W+GY  +     +P+F++   + S    +S +    
Sbjct:    62 DGNDLL-LIHKKGGVVQALSIHNKWKGYSYDYQGSPKPVFTLRDPKHSCFSITSSIRISV 120

Query:   117 GEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDG 176
             G  +  + ++G F  R C+I ++  +   +A++K  +         +D++ +  +P  D 
Sbjct:   121 GPGNCYFDVKGYFPDRDCSIVDSKGNV--IAQVKEWIG-------SRDIYKVVTKPSVDK 171

Query:   177 AFAMGLVLILDQMYGD 192
             AF  G++ +LD +YG+
Sbjct:   172 AFVFGVIAVLDYIYGE 187

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2197036 AT1G53870 "AT1G53870" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 58/180 (32%), Positives = 85/180 (47%)

Query:    15 EETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLR 74
             E+   T+   S+ F   G  V+D KG LI R D+Y   S   +E+  M+ +GK L TL +
Sbjct:    40 EQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSW-SNEVYFMDLNGKILFTLRQ 98

Query:    75 KKPSLHQRWEGY--LGEKMEDQEPIFSVC-RSSIIGRSSVVAHVFGEPSEEYRIEGSFSQ 131
             KK    + WEGY   G +   ++ IF +  R S    SS    V G      RI     Q
Sbjct:    99 KKLGFFKSWEGYNSTGTRFRLRK-IFKILPRES----SSSYKVVMGS-----RIVDGDQQ 148

Query:   132 RCCTIYNASS-------SKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVL 184
              C  I N  S       S   +A++K K+  ++ + LG DV  + +EP  D +  MG+V+
Sbjct:   149 SCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMGIVI 208

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2091040 AT3G14260 "AT3G14260" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 57/182 (31%), Positives = 86/182 (47%)

Query:    15 EETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLR 74
             E+   T+   S+ F  +G  V+D KG +I R D+Y  +S+   E+ LM+ SG  L TL R
Sbjct:    47 EQESFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNY--NSKSCREVYLMDLSGHVLFTLRR 104

Query:    75 KKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFG-EPSEEYRIE-GSF--- 129
             +K  L + WEGY          + S  +       + V  V   + S  YR+  GS    
Sbjct:   105 QKFGLFKTWEGY----RSSSATVESTTKLEYFRVKNNVFQVPNKDSSSSYRVNAGSCRND 160

Query:   130 SQRCCTIYNASSSK-------ERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGL 182
              Q C  +    SS        + +A++KRK   +N + LG DV  + +E   D +F +GL
Sbjct:   161 EQYCYKMVTRGSSLAIEDNCGKLLAEVKRK-QSINGLKLGDDVLTMMVESQVDHSFIIGL 219

Query:   183 VL 184
             VL
Sbjct:   220 VL 221

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LVZ8	LOR12_ARATH	No assigned EC number	0.5957	0.8857	0.8454	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_VI0201 hypothetical protein (211 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	210
pfam04525	185	pfam04525, Tub_2, Tubby C 2	3e-51
COG4894	159	COG4894, COG4894, Uncharacterized conserved protei	8e-04

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  163 bits (414), Expect = 3e-51
 Identities = 77/191 (40%), Positives = 107/191 (56%), Gaps = 15/191 (7%)

Query: 4   IAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLME 63
           + +V   +   E   LTV + S+ F GDGF VYD  G L+ R D Y       DE VLM+
Sbjct: 1   MVVVSSEYLSPEPEDLTVWRKSLVFNGDGFTVYDSNGNLVFRVDGYA--FGLSDERVLMD 58

Query: 64  ASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIG------RSSVVAH--- 114
           +SG  LLT+ RKK SLH RWE Y GE  E ++P+F+V RSSI+         S       
Sbjct: 59  SSGNPLLTIRRKKLSLHDRWEVYRGEGTEGKDPLFTVRRSSIVQLKTSSSVFSKRNSNVI 118

Query: 115 VFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGF 174
           V  E + ++ I+GSF  R C IY+   S + +A++KR+      V LGKDV+ + ++P  
Sbjct: 119 VDDEKNCDFDIKGSFLDRSCKIYD--DSDKLIAEVKRQT--SKGVFLGKDVYTVTVKPEV 174

Query: 175 DGAFAMGLVLI 185
           D AF M LV++
Sbjct: 175 DYAFIMALVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

>gnl|CDD|227231 COG4894, COG4894, Uncharacterized conserved protein [Function unknown]

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 22/171 (12%)

Query: 19  LTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPS 78
           L + +    F GD F +YD  GE   + +  G      D L + +ASGK L+++ +K  S
Sbjct: 8   LFMKQKMFSF-GDAFHIYDRDGEEAFKVE--GSFFSIGDTLTITDASGKTLVSIEQKLLS 64

Query: 79  LHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYN 138
           L  R+E   G          +VC   +  + +     F      + I G+        + 
Sbjct: 65  LLPRYEISDGGG--------TVC--EVRKKVTFSRDKFEIDGLNWEIHGNIWD---DEFK 111

Query: 139 ASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAMGLVLILDQM 189
            +  +   A++ +K          +D + L + P  D    + + + LD +
Sbjct: 112 LTDGENVRAEVSKK------WFSWRDTYHLQVAPDEDALLIIAIAVALDMV 156

Length = 159

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	210
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.62
COG4894	159	Uncharacterized conserved protein [Function unknow	98.29
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	97.77
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	97.35
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	96.46

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=6.5e-45  Score=298.15  Aligned_cols=177  Identities=36%  Similarity=0.587  Sum_probs=108.4

Q ss_pred             eeeecCccCCcceEEEEEEeeeeecCCCEEEEcCCCCEEEEEeecCCCCCCCCeEEEEcCCCCeEEEEEecCCCcccceE
Q 046462            5 AIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWE   84 (210)
Q Consensus         5 ~vV~~~~~~~~~~~l~v~~k~~~~~~d~f~I~D~~G~~vf~V~g~~~~~s~~~~~~l~D~~G~~L~~i~~k~~s~~~~~~   84 (210)
                      +||+++||+++|++|+|++|.+++++++|+|+|++|+++|+|+| ++.+++++++.|+|++|+||++|++|.++++++|+
T Consensus         2 ~vv~~~~~~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g-~~~~s~~~~~~l~D~~G~~L~~i~~k~~~l~~~w~   80 (187)
T PF04525_consen    2 VVVDAQYCSPQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDG-GKFFSIGKKRTLMDASGNPLFTIRRKLFSLRPTWE   80 (187)
T ss_dssp             -SS-GGGB-SS-EEEEEE----------EEEEETTS-EEEEEE---SCTTBTTEEEEE-TTS-EEEEEE--------EEE
T ss_pred             cEECHHHcCCCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEE-ecccCCCCEEEEECCCCCEEEEEEeeecccceEEE
Confidence            68999999999999999999988999999999999999999999 34689999999999999999999999999999999


Q ss_pred             EEecCCCCCCceEEEEEeecccCC-ceEEEEEeC--------CCCceEEEEeeecCceEEEEeCCCCCceEEEEEeeccC
Q 046462           85 GYLGEKMEDQEPIFSVCRSSIIGR-SSVVAHVFG--------EPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDP  155 (210)
Q Consensus        85 v~~~~~~~~~~~l~~ikk~~~~~~-~~~~v~~~~--------~~~~~~~v~G~~~~~~~~I~~~~~~g~~VA~V~rk~~~  155 (210)
                      +|++++.++++++|+||+++.+.. +++.+++.+        .+.++|+|+||||+++|+|++.  +|++||+|+|++. 
T Consensus        81 i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~i~G~~~~~~~~I~~~--~g~~VA~i~rk~~-  157 (187)
T PF04525_consen   81 IYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFLPPKSNISIDDSEGPDFEIKGNFWDRSFTIYDS--GGRVVAEISRKYS-  157 (187)
T ss_dssp             EEETT---GGGEEEEEE----------EEEEET--T----------SEEEES-TTTT--EEEEC--C--EEEEEEE----
T ss_pred             EEECCCCccCceEEEEEEecccCCCcceeEEEecccceeecCCCCceEEEEEEecCcEEEEEEc--CCCEEEEEecccc-
Confidence            999987666679999999966542 345555542        1556899999999999999965  3999999999887 


Q ss_pred             CCceeeeceeEEEEEeCCCCHHHHHHHHHH
Q 046462          156 LNNVTLGKDVFLLCLEPGFDGAFAMGLVLI  185 (210)
Q Consensus       156 ~~~~~~~~dtY~l~V~pgvD~ali~alvv~  185 (210)
                      .+.+++|+|+|.|+|+||+|++||+|||||
T Consensus       158 ~k~~~~~~dty~l~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  158 SKKWFSGRDTYTLTVAPGVDQALVVALVVI  187 (187)
T ss_dssp             -------B-SEEEEE-TTSBHHHHHHHHHH
T ss_pred             eeeEEecCcEEEEEEcCCCCHHHheeEEeC
Confidence            567899999999999999999999999987

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.8e-37  Score=239.32  Aligned_cols=154  Identities=22%  Similarity=0.314  Sum_probs=140.7

Q ss_pred             eEEEEEEeeeeecCCCEEEEcCCCCEEEEEeecCCCCCCCCeEEEEcCCCCeEEEEEecCCCcccceEEEecCCCCCCce
Q 046462           17 THLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEP   96 (210)
Q Consensus        17 ~~l~v~~k~~~~~~d~f~I~D~~G~~vf~V~g~~~~~s~~~~~~l~D~~G~~L~~i~~k~~s~~~~~~v~~~~~~~~~~~   96 (210)
                      .+|.++||. ++.+|+|.|+|.+|+.+|+|+|  ++|++++.++|.|++|.+|.+|++|+++++|+|||-.|++     -
T Consensus         6 ~tl~mkQk~-~~~gd~f~I~d~dgE~af~VeG--s~f~i~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~g-----~   77 (159)
T COG4894           6 ITLFMKQKM-FSFGDAFHIYDRDGEEAFKVEG--SFFSIGDTLTITDASGKTLVSIEQKLLSLLPRYEISDGGG-----T   77 (159)
T ss_pred             HhHhhhhhh-hhcccceEEECCCCcEEEEEee--eEEeeCceEEEEecCCCChHHHHHHHhhccceeEEEcCCC-----C
Confidence            356778886 7888999999999999999999  8899999999999999999999999999999999999986     5


Q ss_pred             EEEEEeecccCCceEEEEEeCCCCceEEEEeeecCceEEEEeCCCCCceEEEEEeeccCCCceeeeceeEEEEEeCCCCH
Q 046462           97 IFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDG  176 (210)
Q Consensus        97 l~~ikk~~~~~~~~~~v~~~~~~~~~~~v~G~~~~~~~~I~~~~~~g~~VA~V~rk~~~~~~~~~~~dtY~l~V~pgvD~  176 (210)
                      .|.++|+..|.+.++.+     ++.+|+++||+|+.+|++.+|   ++++|+|+|||      ++|+|||+|+|+|+.|.
T Consensus        78 ~~~vrKK~tf~Rdk~e~-----d~~~~eihGNi~d~efkl~dg---~~~~aeVsKkw------f~~rdTY~l~vapde~a  143 (159)
T COG4894          78 VCEVRKKVTFSRDKFEI-----DGLNWEIHGNIWDDEFKLTDG---ENVRAEVSKKW------FSWRDTYHLQVAPDEDA  143 (159)
T ss_pred             EEEEEEEEEEEeeeEEE-----cCCCeEEecceeceEEEEecC---Cceehhheeee------EeccceEEEEEcCchhh
Confidence            99999987665545544     677899999999999999999   78999999998      99999999999999999


Q ss_pred             HHHHHHHHHHchhccC
Q 046462          177 AFAMGLVLILDQMYGD  192 (210)
Q Consensus       177 ali~alvv~lD~i~~~  192 (210)
                      ++|+|++||+|++.++
T Consensus       144 ~lii~i~VaLD~v~~~  159 (159)
T COG4894         144 LLIIAIAVALDMVLYN  159 (159)
T ss_pred             HHHHHHHHHHHHHhcC
Confidence            9999999999999763

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.62  E-value=1.4e-13  Score=115.20  Aligned_cols=169  Identities=17%  Similarity=0.182  Sum_probs=124.6

Q ss_pred             eEEEEEEeeeee-------cCCCEEEEcCCCCEEEEEeecCCC-----CC--CCCeEEEEcCCCCeEEEEEecCCCc---
Q 046462           17 THLTVHKTSVFF-------PGDGFIVYDPKGELILRFDSYGPD-----SQ--PKDELVLMEASGKCLLTLLRKKPSL---   79 (210)
Q Consensus        17 ~~l~v~~k~~~~-------~~d~f~I~D~~G~~vf~V~g~~~~-----~s--~~~~~~l~D~~G~~L~~i~~k~~s~---   79 (210)
                      -.+.|+|+...+       ..+.|.|+|++|+.+|.+......     +.  .+=+..|+|+.|++++++++..-..   
T Consensus        22 ~~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~~c~~C~  101 (221)
T PF03803_consen   22 DQLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPFKCCSCC  101 (221)
T ss_pred             CEEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCCcceecc
Confidence            345677776532       235799999999999988653221     11  2335688999999999999876332   


Q ss_pred             ---ccceEEEecCCCCCCceEEEEEeecccCCceEEEEEeCCCCceEEEEee------ecCceEEEEeCCCCCceEEEEE
Q 046462           80 ---HQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPSEEYRIEGS------FSQRCCTIYNASSSKERVAKIK  150 (210)
Q Consensus        80 ---~~~~~v~~~~~~~~~~~l~~ikk~~~~~~~~~~v~~~~~~~~~~~v~G~------~~~~~~~I~~~~~~g~~VA~V~  150 (210)
                         ..+.+|+.+.+    +++.+|+.+..+..++++|.-.. ...-+.|+|.      +++..|.|++.  +|+.||+|+
T Consensus       102 ~~~~~~~~V~~p~g----~~iG~I~q~~~~~~~~f~I~d~~-~~~~~~I~gp~~~~~~~~~~~F~I~~~--~~~~vg~I~  174 (221)
T PF03803_consen  102 PCCLQEMEVESPPG----NLIGSIRQPFSCCRPNFDIFDAN-GNPIFTIKGPCCCCSCCCDWEFEIKDP--NGQEVGSIT  174 (221)
T ss_pred             cccceeEEEecCCC----cEEEEEEEcCcccceEEEEEECC-CceEEEEeCCcceeccccceeeeeecc--cCcEEEEEE
Confidence               35666766543    69999998754434466664432 3456888887      45789999997  389999999


Q ss_pred             eeccCC-CceeeeceeEEEEEeCCCCH---HHHHHHHHHHchhccC
Q 046462          151 RKVDPL-NNVTLGKDVFLLCLEPGFDG---AFAMGLVLILDQMYGD  192 (210)
Q Consensus       151 rk~~~~-~~~~~~~dtY~l~V~pgvD~---ali~alvv~lD~i~~~  192 (210)
                      |+|++. +..+...|+|.|+..+..|.   |+++|.++.||.++-+
T Consensus       175 k~w~G~~~e~~t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe  220 (221)
T PF03803_consen  175 KKWSGFCRELFTDADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFE  220 (221)
T ss_pred             EecCCcchhhccccceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhc
Confidence            999654 33567899999999998876   8899999999998754

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.29  E-value=1.7e-06  Score=67.58  Aligned_cols=69  Identities=14%  Similarity=0.216  Sum_probs=59.2

Q ss_pred             CcceEEEEEEeeeeecCCCEEEEcCCCCEEEEEeecCCCCCCCCeEEEEcCCCCeEEEEEecCCCcccceEEE
Q 046462           14 EEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQRWEGY   86 (210)
Q Consensus        14 ~~~~~l~v~~k~~~~~~d~f~I~D~~G~~vf~V~g~~~~~s~~~~~~l~D~~G~~L~~i~~k~~s~~~~~~v~   86 (210)
                      ..+.++.|.-+. +..+|-|+|+|+.|.+++.++.  +++++.+++.|.|++|+ ++.+++|...++++|++-
T Consensus        27 dgE~af~VeGs~-f~i~dtlti~Da~G~~l~~i~~--kll~l~~~yeI~d~~g~-~~~vrKK~tf~Rdk~e~d   95 (159)
T COG4894          27 DGEEAFKVEGSF-FSIGDTLTITDASGKTLVSIEQ--KLLSLLPRYEISDGGGT-VCEVRKKVTFSRDKFEID   95 (159)
T ss_pred             CCcEEEEEeeeE-EeeCceEEEEecCCCChHHHHH--HHhhccceeEEEcCCCC-EEEEEEEEEEEeeeEEEc
Confidence            457788877554 5667889999999999999999  89999999999999999 888988876668888754

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=97.77  E-value=0.00019  Score=58.57  Aligned_cols=72  Identities=13%  Similarity=0.174  Sum_probs=41.3

Q ss_pred             CcceEEEEEE-eeeeecCCCEEEEcCCCCEEEEEeecCCCCCCCCeEEEEcCCCC----eEEEEEec-CCCcccceEEEe
Q 046462           14 EEETHLTVHK-TSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGK----CLLTLLRK-KPSLHQRWEGYL   87 (210)
Q Consensus        14 ~~~~~l~v~~-k~~~~~~d~f~I~D~~G~~vf~V~g~~~~~s~~~~~~l~D~~G~----~L~~i~~k-~~s~~~~~~v~~   87 (210)
                      +....|+|.. +. +..++...|+|++|++++++..  +.+++.++..++++.+.    +|++|+++ .+..++...+|.
T Consensus        36 ~G~~vf~V~g~~~-~s~~~~~~l~D~~G~~L~~i~~--k~~~l~~~w~i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~  112 (187)
T PF04525_consen   36 NGNVVFRVDGGKF-FSIGKKRTLMDASGNPLFTIRR--KLFSLRPTWEIYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFL  112 (187)
T ss_dssp             TS-EEEEEE--SC-TTBTTEEEEE-TTS-EEEEEE----------EEEEEETT---GGGEEEEEE----------EEEEE
T ss_pred             CCCEEEEEEEecc-cCCCCEEEEECCCCCEEEEEEe--eecccceEEEEEECCCCccCceEEEEEEecccCCCcceeEEE
Confidence            4578899988 54 5667789999999999999999  88999999999999998    59999999 344455556666


Q ss_pred             c
Q 046462           88 G   88 (210)
Q Consensus        88 ~   88 (210)
                      +
T Consensus       113 ~  113 (187)
T PF04525_consen  113 P  113 (187)
T ss_dssp             T
T ss_pred             e
Confidence            5

; PDB: 1ZXU_A 2Q4M_A.

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=97.35  E-value=0.0071  Score=52.99  Aligned_cols=159  Identities=16%  Similarity=0.137  Sum_probs=99.5

Q ss_pred             CCCEEEEcCCCCEEEEEeecCC-----C--CCCCCeEEEEcCCCCeEEEEEecCCCccc--------ceEEEecCCCCCC
Q 046462           30 GDGFIVYDPKGELILRFDSYGP-----D--SQPKDELVLMEASGKCLLTLLRKKPSLHQ--------RWEGYLGEKMEDQ   94 (210)
Q Consensus        30 ~d~f~I~D~~G~~vf~V~g~~~-----~--~s~~~~~~l~D~~G~~L~~i~~k~~s~~~--------~~~v~~~~~~~~~   94 (210)
                      .+.|.|.|.+|+.+|.+-..+.     .  ..-+=...++|.-|++++++++...+...        ..++-.+.    .
T Consensus        98 ~NRY~v~~~~g~~v~~~~E~S~~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~~~c~~~~c~~~~~~~~~v~~p~----~  173 (292)
T KOG0621|consen   98 ANRYVVHDMYGQPLYYAMERSNVFARQYLGTHRPFAMRIMDNFGQEVLTCKRPFPCCSSACALCLAQEIEIQSPP----M  173 (292)
T ss_pred             CcEEEEEcCCcChhHHHHhhchHHHHHhhccCCcceeEeecccCcEEEEEeccccccccccccccccEEEEEcCC----C
Confidence            3569999999998885533111     0  12344678999999999999998754332        11222211    1


Q ss_pred             ceEEEEEeecccCCceEEEEEeCCCC-ceEEEEee-------ecCceEEEEeCCCCCceEEEEEeeccCC-Cceeeecee
Q 046462           95 EPIFSVCRSSIIGRSSVVAHVFGEPS-EEYRIEGS-------FSQRCCTIYNASSSKERVAKIKRKVDPL-NNVTLGKDV  165 (210)
Q Consensus        95 ~~l~~ikk~~~~~~~~~~v~~~~~~~-~~~~v~G~-------~~~~~~~I~~~~~~g~~VA~V~rk~~~~-~~~~~~~dt  165 (210)
                      -.+-+|........+++.|  -.... ..+.|+|.       +-+..|.+...+ .+..|++|.|+|.+. .+.+...|+
T Consensus       174 ~~lG~v~q~~~~~~~~f~i--~~~~~~~v~~v~gp~~~~~~~~~d~~f~~~~~d-~~~~vg~I~k~w~g~~rE~fTDad~  250 (292)
T KOG0621|consen  174 GLLGKVLQTWGCVNPNFHL--WDRDGNLVFLVEGPRCCTFACCDDTVFFPKTTD-NGRIVGSISRKWAGLVREAFTDADT  250 (292)
T ss_pred             ceEEEEEEeeccccceEEE--EcccceeEEEEEcCceeEEEeecCcceeEEEcC-CCeEEEEEeecccchhhhheeccce
Confidence            2444443332122223333  22222 23566655       333444444432 588899999999764 466778999


Q ss_pred             EEEEEeCCCCH---HHHHHHHHHHchhccCCCC
Q 046462          166 FLLCLEPGFDG---AFAMGLVLILDQMYGDDDD  195 (210)
Q Consensus       166 Y~l~V~pgvD~---ali~alvv~lD~i~~~~~~  195 (210)
                      |.|...-..|.   ++++|.+.-||.+.-+.+.
T Consensus       251 f~v~FPldLdvk~kavllga~flID~~~Fe~~~  283 (292)
T KOG0621|consen  251 FVVHFPLDLDVKLKALLLGSTFLIDYMSFESRG  283 (292)
T ss_pred             eeEecCCcCCHHHHhhhhhheeeEEEEEEecCC
Confidence            99998877776   7899999999988777664

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=96.46  E-value=0.04  Score=45.82  Aligned_cols=69  Identities=13%  Similarity=0.206  Sum_probs=53.6

Q ss_pred             EEEEcCCCCEEEEEeecCCCCC----CCCeEEEEcCCCCeEEEEEecCCCcccceEEEecCCCCCCceEEEEEeecc
Q 046462           33 FIVYDPKGELILRFDSYGPDSQ----PKDELVLMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSI  105 (210)
Q Consensus        33 f~I~D~~G~~vf~V~g~~~~~s----~~~~~~l~D~~G~~L~~i~~k~~s~~~~~~v~~~~~~~~~~~l~~ikk~~~  105 (210)
                      ..|+|.+|+.+++++-..+...    ...+..+.++.|++|-+|+++...+.++|+|+..++    +++++|+.+.+
T Consensus        78 ~~i~D~~g~~vl~i~Rp~~c~~C~~~~~~~~~V~~p~g~~iG~I~q~~~~~~~~f~I~d~~~----~~~~~I~gp~~  150 (221)
T PF03803_consen   78 MHIYDNYGREVLTIERPFKCCSCCPCCLQEMEVESPPGNLIGSIRQPFSCCRPNFDIFDANG----NPIFTIKGPCC  150 (221)
T ss_pred             EEEEecCCCEEEEEEcCCcceecccccceeEEEecCCCcEEEEEEEcCcccceEEEEEECCC----ceEEEEeCCcc
Confidence            4688999999999988322111    246778889999999999998777889999999874    58888887643

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	210
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		3e-17

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 1   MSGIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELV 60
            +G  +VD ++C        + +         F++ D  G L+ +     P     D+ V
Sbjct: 22  QAGGVVVDPKYCAPYPIDXAIVRKXXSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRV 79
Query: 61  LMEASGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPS 120
           L++ SG  ++TL  K  S H RW+ + G   + ++ +++V RSS +   + +    G   
Sbjct: 80  LLDGSGTPVVTLREKXVSXHDRWQVFRGGSTDQRDLLYTVKRSSXLQLKTKLDVFLGHNK 139
Query: 121 EE----YRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDG 176
           +E    +R++GS+ +R C +Y A  S   VA+  RK   + +V LGKD F + + P  D 
Sbjct: 140 DEKRCDFRVKGSWLERSCVVY-AGESDAIVAQXHRK-HTVQSVFLGKDNFSVTVYPNVDY 197
Query: 177 AFAMGLVLILDQMYGDD 193
           AF   LV+ILD +  +D
Sbjct: 198 AFIASLVVILDDVNRED 214

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	210
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	2e-51

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  164 bits (416), Expect = 2e-51
 Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 8/193 (4%)

Query: 5   AIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEA 64
            +VD ++C      + + +  +      F++ D  G L+ +     P     D+ VL++ 
Sbjct: 26  VVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVK--EPVFGLHDKRVLLDG 83

Query: 65  SGKCLLTLLRKKPSLHQRWEGYLGEKMEDQEPIFSVCRSSIIGRSSVVAHVFGEPS---- 120
           SG  ++TL  K  S+H RW+ + G   + ++ +++V RSS++   + +    G       
Sbjct: 84  SGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKR 143

Query: 121 EEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNNVTLGKDVFLLCLEPGFDGAFAM 180
            ++R++GS+ +R C +Y    S   VA++ RK   + +V LGKD F + + P  D AF  
Sbjct: 144 CDFRVKGSWLERSCVVYAG-ESDAIVAQMHRK-HTVQSVFLGKDNFSVTVYPNVDYAFIA 201

Query: 181 GLVLILDQMYGDD 193
            LV+ILD +  +D
Sbjct: 202 SLVVILDDVNRED 214

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	210
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	97.97

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=9.2e-42  Score=284.17  Aligned_cols=189  Identities=28%  Similarity=0.534  Sum_probs=145.8

Q ss_pred             ceeeeecCccCCcceEEEEEEeeeeecCCCEEEEcCCCCEEEEEeecCCCCCCCCeEEEEcCCCCeEEEEEecCCCcccc
Q 046462            3 GIAIVDERFCFEEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGKCLLTLLRKKPSLHQR   82 (210)
Q Consensus         3 ~~~vV~~~~~~~~~~~l~v~~k~~~~~~d~f~I~D~~G~~vf~V~g~~~~~s~~~~~~l~D~~G~~L~~i~~k~~s~~~~   82 (210)
                      .+|||+++||++++++|+|+||.+.+.+++|+|+|++|+++|+|+|  +.++++.++.|+|++|++|++|++|.++++++
T Consensus        24 ~~~vv~~~~~~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~--~~~~~~~~~~l~D~~G~~l~~i~rk~~~~~~~  101 (217)
T 1zxu_A           24 GGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRVLLDGSGTPVVTLREKMVSMHDR  101 (217)
T ss_dssp             CCCSSCGGGBCSSCEEEEEECC-----CCCEEEEETTSCEEEEEEC--SSTTCCSEEEEECTTSCEEEEEEC------CE
T ss_pred             cEEEECccccCCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEc--cccCCCCEEEEECCCCCEEEEEEccccccCcE
Confidence            5789999999999999999999988888899999999999999999  66899999999999999999999999999999


Q ss_pred             eEEEecCCCCCCceEEEEEeeccc-CCceEEEEEeCC---CCceEEEEeeecCceEEEEeCCCCCceEEEEEeeccCCCc
Q 046462           83 WEGYLGEKMEDQEPIFSVCRSSII-GRSSVVAHVFGE---PSEEYRIEGSFSQRCCTIYNASSSKERVAKIKRKVDPLNN  158 (210)
Q Consensus        83 ~~v~~~~~~~~~~~l~~ikk~~~~-~~~~~~v~~~~~---~~~~~~v~G~~~~~~~~I~~~~~~g~~VA~V~rk~~~~~~  158 (210)
                      |++|++++.++++++|+||+++.+ .+++++|+..++   +.+.|+|+|+|++++|+|++++ +|++||+|+|+|+ .++
T Consensus       102 ~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~~~~~~~~~~~I~G~~~~~~f~I~~~~-~~~~Va~I~kk~~-~~~  179 (217)
T 1zxu_A          102 WQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGE-SDAIVAQMHRKHT-VQS  179 (217)
T ss_dssp             EEEEETTCCCGGGEEEEEEC-------CCEEEEETTCCC-CCCSEEEESCTTTTCCEEEETT-TCCEEEEEEEC------
T ss_pred             EEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECCCCCCCceEEEEEEeEeCCEEEEEECC-CCEEEEEEEeeee-ccc
Confidence            999998764444689999988432 234678877643   2468999999999999999983 2689999999985 457


Q ss_pred             eeeeceeEEEEEeCCCCHHHHHHHHHHHchhccCCCC
Q 046462          159 VTLGKDVFLLCLEPGFDGAFAMGLVLILDQMYGDDDD  195 (210)
Q Consensus       159 ~~~~~dtY~l~V~pgvD~ali~alvv~lD~i~~~~~~  195 (210)
                      +++++|+|.|+|.||+|.+|+||+|++||+|+.++++
T Consensus       180 ~~~~~D~y~l~V~p~~D~aliialvv~iD~~~~~~~~  216 (217)
T 1zxu_A          180 VFLGKDNFSVTVYPNVDYAFIASLVVILDDVNREDRA  216 (217)
T ss_dssp             ---CBCSEEEEECTTSBHHHHHHHHHHHHHHHC----
T ss_pred             cccCCcEEEEEECCCCCHHHHHHHHHHHHHhhhhccC
Confidence            7899999999999999999999999999999998764

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=97.97  E-value=4.1e-05  Score=62.73  Aligned_cols=97  Identities=18%  Similarity=0.225  Sum_probs=64.3

Q ss_pred             CcceEEEEEEeeeeecCCCEEEEcCCCCEEEEEeecCCCCCCCCeEEEEcCCCC----eEEEEEecC-CCcccceEEEec
Q 046462           14 EEETHLTVHKTSVFFPGDGFIVYDPKGELILRFDSYGPDSQPKDELVLMEASGK----CLLTLLRKK-PSLHQRWEGYLG   88 (210)
Q Consensus        14 ~~~~~l~v~~k~~~~~~d~f~I~D~~G~~vf~V~g~~~~~s~~~~~~l~D~~G~----~L~~i~~k~-~s~~~~~~v~~~   88 (210)
                      .....|+|..+. ...++.+.|+|.+|++++++..  +.+++..+..++++.+.    +|++|+++. +++++.|+|+.+
T Consensus        60 ~G~~vf~V~~~~-~~~~~~~~l~D~~G~~l~~i~r--k~~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~  136 (217)
T 1zxu_A           60 NGNLLFKVKEPV-FGLHDKRVLLDGSGTPVVTLRE--KMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLG  136 (217)
T ss_dssp             TSCEEEEEECSS-TTCCSEEEEECTTSCEEEEEEC--------CEEEEEETTCCCGGGEEEEEEC-------CCEEEEET
T ss_pred             CCCEEEEEEccc-cCCCCEEEEECCCCCEEEEEEc--cccccCcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEEC
Confidence            467889998874 4456779999999999999999  77889999999998875    799999883 568899999988


Q ss_pred             CCCCCCceEEEEEeecccCCceEEEEE
Q 046462           89 EKMEDQEPIFSVCRSSIIGRSSVVAHV  115 (210)
Q Consensus        89 ~~~~~~~~l~~ikk~~~~~~~~~~v~~  115 (210)
                      +...++.+.++|+-. ++. ..+.|.-
T Consensus       137 ~~~~~~~~~~~I~G~-~~~-~~f~I~~  161 (217)
T 1zxu_A          137 HNKDEKRCDFRVKGS-WLE-RSCVVYA  161 (217)
T ss_dssp             TCCC-CCCSEEEESC-TTT-TCCEEEE
T ss_pred             CCCCCCceEEEEEEe-EeC-CEEEEEE
Confidence            643333466777543 333 2456643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	210
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	5e-56

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	210
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	97.74