Citrus Sinensis ID: 046463

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MKRGESSGGGHSSLGYLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFGDKKK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccEEEccccccccHHHccccccc
Coil and Loop (DISEMBL)
mkrgessggghsslgylfgsdqepsqppaspaaikapwdddnttkkppnnsspsekltvsnnyhraqgqnsgnfitdrpttrvqsapggdsslgylfgdkkk
Flexible Loop (DISEMBL)
mkrgessgggHSSLGYLFGSDQEPSQPPASPAAIKAPWDDDnttkkppnnsspsekLTVSNNYHRaqgqnsgnfitdrpttrvqsapggdsslgylfgdkkk
Low Complexity Region (SEG)
MKRgessggghsslgylfgsDQEpsqppaspaaikapWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFGDKKK
Disordered region (IsUnstruct)
******************************************************************************************************
Disordered Region (DISOPRED)
***G**SGGGHSSLGYLFGSD*********************************************QGQNSGNFITDRPTTRVQSAPGGDSSL**LFG****
Disordered Region (DISEMBL)
**********HSSLGYLFGS*************IKAPWDD******************VSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFGDKKK
Disordered Region (DISPRO)
************************************************************NNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSL*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRGESSGGGHSSLGYLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFGDKKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
Q9LE54	110	Protein SPIRAL1-like 2 OS	yes	no	0.921	0.854	0.472	1e-19
B3H4F1	113	Protein SPIRAL1-like 1 OS	no	no	0.911	0.823	0.486	7e-17
Q8LGD1	99	Protein SPIRAL1-like 5 OS	no	no	0.803	0.828	0.528	2e-14
Q9SJW3	119	Protein SPIRAL1 OS=Arabid	no	no	0.950	0.815	0.417	6e-14
Q9LF22	127	Protein SPIRAL1-like 4 OS	no	no	0.941	0.755	0.443	8e-14
Q2R0W8	115	Protein SPIRAL1-like 2 OS	yes	no	0.421	0.373	0.744	1e-12
Q2QQ99	101	Protein SPIRAL1-like 3 OS	no	no	0.794	0.801	0.477	3e-12
Q7Y1L9	116	Protein SPIRAL1-like 1 OS	no	no	0.382	0.336	0.769	5e-12
Q9S7P8	122	Protein SPIRAL1-like 3 OS	no	no	0.872	0.729	0.408	4e-11
Q7XQ83	127	Protein SPIRAL1-like 4 OS	no	no	0.421	0.338	0.659	8e-09

>sp|Q9LE54|SP1L2_ARATH Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 16/110 (14%)

Query: 1   MKRGESSGGGHSSLGYLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKL--- 57
           M RG S+GGG SSLGYLFGS + P       A  K P + +++   PP  ++ +  +   
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLA----AVNKTPAETESSAHAPPTQAAAANAVDSI 56

Query: 58  ---------TVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
                      +NNY RA+GQN+GNFITDRP+T+V SAPGG SSL YLFG
Sbjct: 57  KQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.
Arabidopsis thaliana (taxid: 3702)

>sp|B3H4F1|SP1L1_ARATH Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/113 (48%), Positives = 67/113 (59%), Gaps = 20/113 (17%)

Query: 1   MKRGESSGGGHSSLGYLFGSDQEP----SQPPASPAAIKAPWDDD-----------NTTK 45
           M RG S GGG SSLGYLFGS + P    +  PA P++   P   D           N TK
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPA-PSSETLPISADPSPKHVAAQTVNVTK 59

Query: 46  KPPNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
           + P   + S     +NNY RA GQN+GNF+TDRP+T+V +APGG SSL YLFG
Sbjct: 60  QIPAGINKSS----TNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LGD1|SP1L5_ARATH Protein SPIRAL1-like 5 OS=Arabidopsis thaliana GN=SP1L5 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 5/87 (5%)

Query: 16  YLFGSDQE--PSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGN 73
           YLFGSD E   +  P        P+  D+T +    +  P  K++ +NNY R QGQNSGN
Sbjct: 16  YLFGSDNEIPKTPAPPVAPKPAPPYGVDSTEEDHEADQKP--KIS-NNNYQRVQGQNSGN 72

Query: 74  FITDRPTTRVQSAPGGDSSLGYLFGDK 100
           F+TDRPTT+V+S PGG SSLGYLFGDK
Sbjct: 73  FVTDRPTTKVKSVPGGGSSLGYLFGDK 99

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJW3|SPR1_ARATH Protein SPIRAL1 OS=Arabidopsis thaliana GN=SPR1 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 58/115 (50%), Gaps = 18/115 (15%)

Query: 1   MKRGESSGGGHSSLGYLFGSDQE------------------PSQPPASPAAIKAPWDDDN 42
           M RG S GGG SSL YLFG D                    P+ P  +  A        +
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 43  TTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLF 97
                 N   P+   T  NNY RA+GQN+GNF+TDRP+T+V +APGG SSL YLF
Sbjct: 61  VEPAELNKQIPAGIKTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLF 115

Required for directional control of cell elongation. Stabilizes growing ends of cortical microtubules and influences their dynamic properties. Acts redundantly with SP1Ls in maintaining the cortical microtubules organization essential for anisotropic cell growth. Plays a key role in salt stress-induced microtubules disassembly.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LF22|SP1L4_ARATH Protein SPIRAL1-like 4 OS=Arabidopsis thaliana GN=SP1L4 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 19/115 (16%)

Query: 3   RGESSGGGHSSLGYLFGSDQ---EPSQPPASPA-------------AIKAPWDDDNTTKK 46
           RG +SGGG SSLGYLFGS +   +P++P A                A   P     TT  
Sbjct: 5   RGVNSGGGESSLGYLFGSGESVPKPNKPNAKTGFTTTTTTTTTTDGAGGRPKTTTTTTTT 64

Query: 47  PPNNSSPSEKLTVS---NNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
              N +      V    NNY+R+ GQN GNF+T+RP+T+V +APGG SSLGYLFG
Sbjct: 65  GDKNKTEENSAGVRGSPNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFG 119

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q2R0W8|SP1L2_ORYSJ Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 37/43 (86%)

Query: 58  TVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFGDK 100
           T +NNY RAQGQN GNF+TDRP+T+V +APGG SSLGYLFG K
Sbjct: 73  TQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGGK 115

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q2QQ99|SP1L3_ORYSJ Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 7/88 (7%)

Query: 16  YLFGSDQEP--SQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGN 73
           YLFG  + P  ++ PA P    AP       K+ P     S+    +NNY RA+GQN GN
Sbjct: 16  YLFGGGEAPKSAEKPA-PVQKPAPSSSAEKLKEIPAGIQSSK----ANNYMRAEGQNCGN 70

Query: 74  FITDRPTTRVQSAPGGDSSLGYLFGDKK 101
           F+TDRP+T+VQ+APGG SSL YLF   K
Sbjct: 71  FLTDRPSTKVQAAPGGGSSLDYLFSGNK 98

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7Y1L9|SP1L1_ORYSJ Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 36/39 (92%)

Query: 60  SNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
           +NNYHRA GQN+GNF+TDRP+T+V +APGG SSLGYLFG
Sbjct: 76  NNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFG 114

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9S7P8|SP1L3_ARATH Protein SPIRAL1-like 3 OS=Arabidopsis thaliana GN=SP1L3 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 56/115 (48%), Gaps = 26/115 (22%)

Query: 3   RGESSGGGHSSLGYLFGSDQEPSQPPAS-------------------PAAIKAPWDDDNT 43
           RG ++G   SSLGYLFGS Q  S   A+                   P         DN 
Sbjct: 5   RGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTTTTTTDGTGGRPITTTTTTVTDNK 64

Query: 44  TKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
                   SP       NNY R++GQN GNF+TDRP+T+V +APGG SSL YLFG
Sbjct: 65  KTSAGVRGSP-------NNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112

Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XQ83|SP1L4_ORYSJ Protein SPIRAL1-like 4 OS=Oryza sativa subsp. japonica GN=Os04g0578300 PE=3 SV=1

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 34/44 (77%), Gaps = 1/44 (2%)

Query: 58  TVSNNYHRAQ-GQNSGNFITDRPTTRVQSAPGGDSSLGYLFGDK 100
           + SN YH  Q G NSG  ITDRP+TRV+ APGG SSLG+LFGD+
Sbjct: 82  SASNIYHTNQVGNNSGLLITDRPSTRVRCAPGGPSSLGFLFGDE 125

Acts in maintaining the cortical microtubules organization essential for anisotropic cell growth.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
224058443	99	predicted protein [Populus trichocarpa]	0.823	0.848	0.658	5e-23
224071978	99	predicted protein [Populus trichocarpa]	0.823	0.848	0.670	1e-22
118482887	99	unknown [Populus trichocarpa]	0.823	0.848	0.647	2e-22
225426170	100	PREDICTED: uncharacterized protein LOC10	0.833	0.85	0.647	6e-21
255537565	100	SP1L, putative [Ricinus communis] gi|223	0.833	0.85	0.623	7e-21
449457568	104	PREDICTED: protein SPIRAL1-like 5-like [	0.852	0.836	0.602	1e-18
297841653	110	hypothetical protein ARALYDRAFT_476049 [	0.911	0.845	0.513	4e-18
15222255	110	protein SPIRAL1-like2 [Arabidopsis thali	0.921	0.854	0.472	5e-18
21592628	110	putative nitrilase-associated protein [A	0.921	0.854	0.472	7e-18
168035702	103	predicted protein [Physcomitrella patens	0.872	0.864	0.495	7e-18

>gi|224058443|ref|XP_002299512.1| predicted protein [Populus trichocarpa] gi|222846770|gb|EEE84317.1| predicted protein [Populus trichocarpa]

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 67/85 (78%), Gaps = 1/85 (1%)

Query: 16  YLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFI 75
           YLFGSD++PS PP        P+  D T +KPP++ S +EK  VSNNYHRAQGQN+GNFI
Sbjct: 16  YLFGSDEQPSAPPPLRPVNLPPYGVDITVEKPPDSGS-AEKKQVSNNYHRAQGQNTGNFI 74

Query: 76  TDRPTTRVQSAPGGDSSLGYLFGDK 100
           TDRP+T+V+S PGGDSSLGYLFGDK
Sbjct: 75  TDRPSTKVKSVPGGDSSLGYLFGDK 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071978|ref|XP_002303604.1| predicted protein [Populus trichocarpa] gi|118481859|gb|ABK92866.1| unknown [Populus trichocarpa] gi|118484209|gb|ABK93985.1| unknown [Populus trichocarpa] gi|222841036|gb|EEE78583.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 1/85 (1%)

Query: 16  YLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFI 75
           YLFGSD++PS PP S      P+  D T +K P++ S SEK  VSNNYHRAQGQN+GNFI
Sbjct: 16  YLFGSDEQPSAPPPSRPVNLPPYGVDITIEKSPDSGS-SEKKPVSNNYHRAQGQNTGNFI 74

Query: 76  TDRPTTRVQSAPGGDSSLGYLFGDK 100
           TDRP+T+V+S PGGDSSLGYLFGDK
Sbjct: 75  TDRPSTKVKSVPGGDSSLGYLFGDK 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482887|gb|ABK93358.1| unknown [Populus trichocarpa]

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 1/85 (1%)

Query: 16  YLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFI 75
           YLFGSD++PS PP        P+  D T +KPP++ S +EK  VSNNYHRAQGQN+GNFI
Sbjct: 16  YLFGSDEQPSAPPPLRPVNLPPYGVDITVEKPPDSGS-AEKKQVSNNYHRAQGQNTGNFI 74

Query: 76  TDRPTTRVQSAPGGDSSLGYLFGDK 100
            DRP+T+V+S PGGDSSLGYLFGDK
Sbjct: 75  ADRPSTKVKSVPGGDSSLGYLFGDK 99

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426170|ref|XP_002278988.1| PREDICTED: uncharacterized protein LOC100250191 [Vitis vinifera] gi|297742229|emb|CBI34378.3| unnamed protein product [Vitis vinifera]

 Score =  104 bits (260), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 66/85 (77%)

Query: 16  YLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFI 75
           YLFGSD++PS+PP SP     P+  D   +KPPN   P+EK + SNNY R QGQN+GNFI
Sbjct: 16  YLFGSDEQPSEPPVSPTIQLPPYGIDTIPEKPPNRPPPAEKQSSSNNYQRTQGQNTGNFI 75

Query: 76  TDRPTTRVQSAPGGDSSLGYLFGDK 100
           TDRP+T+V+S PGGDSSLGYLFGDK
Sbjct: 76  TDRPSTKVRSVPGGDSSLGYLFGDK 100

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537565|ref|XP_002509849.1| SP1L, putative [Ricinus communis] gi|223549748|gb|EEF51236.1| SP1L, putative [Ricinus communis]

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/85 (62%), Positives = 63/85 (74%)

Query: 16  YLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFI 75
           YLFGSD+ P+ PP S      P+  D   +K   N+  +EK  VSNNYHRAQGQN+GNFI
Sbjct: 16  YLFGSDENPTTPPPSQTVNLPPYGVDVIPEKNNPNNLSAEKGKVSNNYHRAQGQNTGNFI 75

Query: 76  TDRPTTRVQSAPGGDSSLGYLFGDK 100
           TDRP+T+V+S PGGDSSLGYLFGDK
Sbjct: 76  TDRPSTKVKSVPGGDSSLGYLFGDK 100

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457568|ref|XP_004146520.1| PREDICTED: protein SPIRAL1-like 5-like [Cucumis sativus] gi|449499933|ref|XP_004160958.1| PREDICTED: protein SPIRAL1-like 5-like [Cucumis sativus]

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/88 (60%), Positives = 60/88 (68%), Gaps = 1/88 (1%)

Query: 16  YLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKLTVSNN-YHRAQGQNSGNF 74
           YLFG D +P +P  S   +  P+  D       NN SPS K  VSNN Y RA GQNSGNF
Sbjct: 16  YLFGKDDQPRKPQVSKVVLPPPYGIDLNPDDHNNNPSPSPKQLVSNNNYPRAHGQNSGNF 75

Query: 75  ITDRPTTRVQSAPGGDSSLGYLFGDKKK 102
           ITDRP+T+V+SAPGGDSSLGYLFGD  K
Sbjct: 76  ITDRPSTKVKSAPGGDSSLGYLFGDITK 103

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841653|ref|XP_002888708.1| hypothetical protein ARALYDRAFT_476049 [Arabidopsis lyrata subsp. lyrata] gi|297334549|gb|EFH64967.1| hypothetical protein ARALYDRAFT_476049 [Arabidopsis lyrata subsp. lyrata]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 67/111 (60%), Gaps = 18/111 (16%)

Query: 1   MKRGESSGGGHSSLGYLFGSDQEP-------------SQPPASPAAIKAPWDDDNTTKKP 47
           M RG S+GGG SSLGYLFGS + P             S  PA P    AP   D+  + P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKPSTVNKAPAETQSSAPAPPLQTAAPKAVDSIKQVP 60

Query: 48  PNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
              +S S     +NNY RA+GQN+GNFITDRP+T+V SAPGG SSL YLFG
Sbjct: 61  AGLNSNS-----TNNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLNYLFG 106

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15222255|ref|NP_177083.1| protein SPIRAL1-like2 [Arabidopsis thaliana] gi|42572039|ref|NP_974110.1| protein SPIRAL1-like2 [Arabidopsis thaliana] gi|75173888|sp|Q9LE54.1|SP1L2_ARATH RecName: Full=Protein SPIRAL1-like 2 gi|6730644|gb|AAF27065.1|AC008262_14 F4N2.18 [Arabidopsis thaliana] gi|12325084|gb|AAG52493.1|AC018364_11 putative nitrilase-associated protein; 69823-70365 [Arabidopsis thaliana] gi|88900378|gb|ABD57501.1| At1g69230 [Arabidopsis thaliana] gi|332196777|gb|AEE34898.1| protein SPIRAL1-like2 [Arabidopsis thaliana] gi|332196778|gb|AEE34899.1| protein SPIRAL1-like2 [Arabidopsis thaliana]

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 16/110 (14%)

Query: 1   MKRGESSGGGHSSLGYLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKL--- 57
           M RG S+GGG SSLGYLFGS + P       A  K P + +++   PP  ++ +  +   
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLA----AVNKTPAETESSAHAPPTQAAAANAVDSI 56

Query: 58  ---------TVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
                      +NNY RA+GQN+GNFITDRP+T+V SAPGG SSL YLFG
Sbjct: 57  KQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592628|gb|AAM64577.1| putative nitrilase-associated protein [Arabidopsis thaliana]

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 16/110 (14%)

Query: 1   MKRGESSGGGHSSLGYLFGSDQEPSQPPASPAAIKAPWDDDNTTKKPPNNSSPSEKL--- 57
           M RG S+GGG SSLGYLFGS + P       A  K P + +++   PP  ++    +   
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLA----AVNKTPAETESSAHAPPTQAAAPNAVDSI 56

Query: 58  ---------TVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
                      +NNY RA+GQN+GNFITDRP+T+V SAPGG SSL YLFG
Sbjct: 57  KQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLAYLFG 106

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168035702|ref|XP_001770348.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678379|gb|EDQ64838.1| predicted protein [Physcomitrella patens subsp. patens]

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 67/111 (60%), Gaps = 22/111 (19%)

Query: 1   MKRGESSGGGHSSLGYLFGSDQEPSQPPAS------------PAAIKAPWDDDNTTKKPP 48
            +RG+S GGG+SSLGYLFG D +P   P S            PAA K   D+ +T     
Sbjct: 2   FQRGQSCGGGYSSLGYLFGGDDKPRVFPKSRPLQQSIHEEPKPAAGKVFHDERDT----- 56

Query: 49  NNSSPSEKL-TVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
               P  ++   +NNY R  GQN GNFITDRP+TRVQ++PGG SSLGYLFG
Sbjct: 57  ----PQGRMGRTNNNYQRVDGQNCGNFITDRPSTRVQASPGGQSSLGYLFG 103

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
TAIR|locus:505006517	99	SP1L5 "AT4G23496" [Arabidopsis	0.558	0.575	0.616	8.8e-15
TAIR|locus:2026441	110	SP1L2 "AT1G69230" [Arabidopsis	0.382	0.354	0.769	3.1e-12
TAIR|locus:4515102592	113	SP1L1 "SPIRAL1-like1" [Arabido	0.519	0.469	0.578	5e-12
TAIR|locus:2044224	119	SPR1 "AT2G03680" [Arabidopsis	0.568	0.487	0.564	8.2e-12
TAIR|locus:2076537	122	SP1L3 "AT3G02180" [Arabidopsis	0.549	0.459	0.561	1.3e-11
TAIR|locus:2180902	127	SP1L4 "AT5G15600" [Arabidopsis	0.372	0.299	0.710	1.3e-11

TAIR|locus:505006517 SP1L5 "AT4G23496" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 37/60 (61%), Positives = 46/60 (76%)

Query:    41 DNTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFGDK 100
             D+T +    +  P  K++ +NNY R QGQNSGNF+TDRPTT+V+S PGG SSLGYLFGDK
Sbjct:    43 DSTEEDHEADQKP--KIS-NNNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFGDK 99

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2026441 SP1L2 "AT1G69230" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 30/39 (76%), Positives = 35/39 (89%)

Query:    60 SNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
             +NNY RA+GQN+GNFITDRP+T+V SAPGG SSL YLFG
Sbjct:    68 ANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFG 106

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4515102592 SP1L1 "SPIRAL1-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/57 (57%), Positives = 41/57 (71%)

Query:    42 NTTKKPPNNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
             N TK+ P   + S     +NNY RA GQN+GNF+TDRP+T+V +APGG SSL YLFG
Sbjct:    56 NVTKQIPAGINKSS----TNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFG 108

GO:0005886 "plasma membrane" evidence=ISM

TAIR|locus:2044224 SPR1 "AT2G03680" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 35/62 (56%), Positives = 42/62 (67%)

Query:    43 TTKKPP---NNSSPSEKLTVSNNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLF-G 98
             TT   P   N   P+   T  NNY RA+GQN+GNF+TDRP+T+V +APGG SSL YLF G
Sbjct:    58 TTSVEPAELNKQIPAGIKTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTG 117

Query:    99 DK 100
              K
Sbjct:   118 GK 119

GO:0003674 "molecular_function" evidence=ND

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0055028 "cortical microtubule" evidence=IDA

GO:0005876 "spindle microtubule" evidence=IDA

GO:0009524 "phragmoplast" evidence=IDA

GO:0009574 "preprophase band" evidence=IDA

GO:0010005 "cortical microtubule, transverse to long axis" evidence=IDA

GO:0051211 "anisotropic cell growth" evidence=IMP

GO:0043622 "cortical microtubule organization" evidence=IGI

GO:0071472 "cellular response to salt stress" evidence=IGI

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2076537 SP1L3 "AT3G02180" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 32/57 (56%), Positives = 40/57 (70%)

Query:    43 TTKKPPNNSSPSEKLTVS-NNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
             TT    +N   S  +  S NNY R++GQN GNF+TDRP+T+V +APGG SSL YLFG
Sbjct:    56 TTTTVTDNKKTSAGVRGSPNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180902 SP1L4 "AT5G15600" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 27/38 (71%), Positives = 34/38 (89%)

Query:    61 NNYHRAQGQNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
             NNY+R+ GQN GNF+T+RP+T+V +APGG SSLGYLFG
Sbjct:    82 NNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFG 119


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.305   0.125   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102        71   0.00091  102 3  11 23  0.47    29
                                                     29  0.42    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  449 (48 KB)
  Total size of DFA:  89 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.13u 0.11s 12.24t   Elapsed:  00:00:01
  Total cpu time:  12.13u 0.11s 12.24t   Elapsed:  00:00:01
  Start:  Sat May 11 13:13:10 2013   End:  Sat May 11 13:13:11 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2R0W8	SP1L2_ORYSJ	No assigned EC number	0.7441	0.4215	0.3739	yes	no
Q9LE54	SP1L2_ARATH	No assigned EC number	0.4727	0.9215	0.8545	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_I0880 SubName- Full=Putative uncharacterized protein; (99 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	102
COG5373	931	COG5373, COG5373, Predicted membrane protein [Func	0.001

>gnl|CDD|227665 COG5373, COG5373, Predicted membrane protein [Function unknown]

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 15/90 (16%), Positives = 22/90 (24%), Gaps = 7/90 (7%)

Query: 16  YLFGSDQ-EPSQPPASPAAIKAPWDD------DNTTKKPPNNSSPSEKLTVSNNYHRAQG 68
              G       Q  A  AA  AP               P   +   E    +     A  
Sbjct: 42  GAAGPVAKAAEQMAAPEAAEAAPLPAAAESIASPEVPPPVPPAPAQEGEAPAAEQPSAVP 101

Query: 69  QNSGNFITDRPTTRVQSAPGGDSSLGYLFG 98
             S       P     +A    +++ +L G
Sbjct: 102 APSAAPAPAEPVEPSLAANPFAAAIEWLLG 131

Length = 931

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00