Citrus Sinensis ID: 046481
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 247 | ||||||
| 224095758 | 242 | predicted protein [Populus trichocarpa] | 0.951 | 0.971 | 0.614 | 2e-80 | |
| 224093230 | 242 | predicted protein [Populus trichocarpa] | 0.975 | 0.995 | 0.616 | 2e-80 | |
| 224093228 | 242 | predicted protein [Populus trichocarpa] | 0.975 | 0.995 | 0.612 | 3e-79 | |
| 224132594 | 242 | predicted protein [Populus trichocarpa] | 0.943 | 0.962 | 0.641 | 9e-79 | |
| 224132974 | 242 | predicted protein [Populus trichocarpa] | 0.931 | 0.950 | 0.622 | 2e-76 | |
| 255549325 | 240 | DUF26 domain-containing protein 2 precur | 0.959 | 0.987 | 0.607 | 6e-75 | |
| 224132966 | 214 | predicted protein [Populus trichocarpa] | 0.846 | 0.976 | 0.639 | 3e-73 | |
| 225447364 | 252 | PREDICTED: cysteine-rich repeat secretor | 0.959 | 0.940 | 0.584 | 8e-73 | |
| 297739322 | 266 | unnamed protein product [Vitis vinifera] | 0.959 | 0.890 | 0.584 | 9e-73 | |
| 255585783 | 243 | DUF26 domain-containing protein 2 precur | 0.931 | 0.946 | 0.595 | 4e-72 |
| >gi|224095758|ref|XP_002310467.1| predicted protein [Populus trichocarpa] gi|222853370|gb|EEE90917.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/241 (61%), Positives = 183/241 (75%), Gaps = 6/241 (2%)
Query: 8 STFSLLISFALLLQTVTFGANVDPISYSCSN-ENFTANGRYQTNLNALMGYIYHQAPPTG 66
++F L++F+LL+ T G DP+ + CS ENFTANG Y++NLN L ++Y+QAP TG
Sbjct: 7 ASFLCLLAFSLLVHT---GFEADPLFHFCSTPENFTANGPYESNLNKLTSFLYYQAPRTG 63
Query: 67 FGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKY 126
FG+GS G+ P+QA GLALCRGD S SDCKTCV +A S IRK CPY+++A I+YDNC+LKY
Sbjct: 64 FGMGSKGQKPVQAYGLALCRGDASTSDCKTCVVEAGSEIRKRCPYNEAAIIWYDNCLLKY 123
Query: 127 SNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAGELELNE 186
SN FFGQIDNG K++MWNVN V PV FN+K+K+LL QLA++A PKLYA G +EL E
Sbjct: 124 SNKGFFGQIDNGNKFYMWNVNAVSEPVPFNEKTKELLTQLANKAKATPKLYATGGMELGE 183
Query: 187 GSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPFAK 246
+ K+YGL QCTRDLS CK LD II +LP CCDGK+GGRVV+GSC RYEIYPF
Sbjct: 184 ST--KLYGLVQCTRDLSSAVCKKCLDGIIGELPSCCDGKEGGRVVSGSCNFRYEIYPFVN 241
Query: 247 A 247
A
Sbjct: 242 A 242
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224093230|ref|XP_002309844.1| predicted protein [Populus trichocarpa] gi|222852747|gb|EEE90294.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224093228|ref|XP_002309843.1| predicted protein [Populus trichocarpa] gi|222852746|gb|EEE90293.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224132594|ref|XP_002327834.1| predicted protein [Populus trichocarpa] gi|222837243|gb|EEE75622.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224132974|ref|XP_002327925.1| predicted protein [Populus trichocarpa] gi|222837334|gb|EEE75713.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255549325|ref|XP_002515716.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223545153|gb|EEF46663.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224132966|ref|XP_002327923.1| predicted protein [Populus trichocarpa] gi|222837332|gb|EEE75711.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225447364|ref|XP_002274745.1| PREDICTED: cysteine-rich repeat secretory protein 38-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297739322|emb|CBI28973.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255585783|ref|XP_002533571.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223526548|gb|EEF28806.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 247 | ||||||
| TAIR|locus:2095662 | 252 | AT3G22060 "AT3G22060" [Arabido | 0.983 | 0.964 | 0.454 | 4.3e-54 | |
| TAIR|locus:2085470 | 258 | AT3G58310 "AT3G58310" [Arabido | 0.975 | 0.934 | 0.390 | 3.5e-43 | |
| TAIR|locus:2095642 | 256 | AT3G21990 "AT3G21990" [Arabido | 0.983 | 0.949 | 0.356 | 2.8e-34 | |
| TAIR|locus:2065878 | 255 | AT2G31620 "AT2G31620" [Arabido | 0.967 | 0.937 | 0.350 | 9.5e-34 | |
| TAIR|locus:2166091 | 263 | AT5G48540 "AT5G48540" [Arabido | 0.943 | 0.885 | 0.343 | 3.3e-31 | |
| TAIR|locus:2115728 | 675 | CRK25 "cysteine-rich RLK (RECE | 0.963 | 0.352 | 0.355 | 4.6e-31 | |
| TAIR|locus:2095632 | 258 | AT3G22050 "AT3G22050" [Arabido | 0.931 | 0.891 | 0.337 | 6.9e-31 | |
| TAIR|locus:2095582 | 441 | AT3G21960 [Arabidopsis thalian | 0.813 | 0.455 | 0.359 | 4.4e-29 | |
| TAIR|locus:2830202 | 260 | AT3G21945 "AT3G21945" [Arabido | 0.967 | 0.919 | 0.334 | 5.6e-29 | |
| TAIR|locus:2095617 | 257 | AT3G22040 "AT3G22040" [Arabido | 0.789 | 0.758 | 0.355 | 5.6e-29 |
| TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 115/253 (45%), Positives = 162/253 (64%)
Query: 1 MSSPRVSSTFSLL-ISFALL-LQTV-TFGANVDPISYSCSN-E-NFTANGRYQTNLNALM 55
MSS + F +L I+ +L + TV + N + + CS+ E +FT+ Y++NLN L
Sbjct: 1 MSSLKRIVWFPILAIAIQILSIHTVLSQSQNNAFLFHKCSDIEGSFTSKSLYESNLNNLF 60
Query: 56 GYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSA 115
+ ++ P TGF S G P NGLALCRGD S+SDC++C+ AI +R+ CP +K+
Sbjct: 61 SQLSYKVPSTGFAASSTGNTPNNVNGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAG 120
Query: 116 KIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKP- 174
++YDNC++KYS+ FFG+ID +++++NV NV P FN ++K LL +L +A+ +
Sbjct: 121 IVWYDNCLVKYSSTNFFGKIDFENRFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDN 180
Query: 175 -KLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTG 233
KL+A GE + K K+YGL QCTRDL CK L+ II +LP CCDGK+GGRVV G
Sbjct: 181 QKLFATGEKNIG---KNKLYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGG 237
Query: 234 SCTIRYEIYPFAK 246
SC RYEIYPF K
Sbjct: 238 SCNFRYEIYPFVK 250
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| TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2065878 AT2G31620 "AT2G31620" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2166091 AT5G48540 "AT5G48540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095632 AT3G22050 "AT3G22050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095582 AT3G21960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2830202 AT3G21945 "AT3G21945" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095617 AT3G22040 "AT3G22040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 247 | |||
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 3e-24 | |
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 2e-18 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 3e-24
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 33 SYSCSNENFTANGRYQTNLNALMGYIYHQA---PPTGFGIGSLGKNPIQANGLALCRGDV 89
S + S TAN +++NLNAL+ + A GF G+ G P GLA CRGD+
Sbjct: 5 SSNTSGNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDL 64
Query: 90 SASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKF 131
SASDC++C+A A+S +R+ CP K +I+YD+C L+Y + F
Sbjct: 65 SASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106
|
This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 247 | |||
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.94 | |
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.92 |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
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Probab=99.94 E-value=5.4e-27 Score=179.16 Aligned_cols=99 Identities=43% Similarity=0.873 Sum_probs=76.8
Q ss_pred ccCCC-C--Ccc-cCCcHHHHHHHHHHHHhHhcCCC---CCccccccCCCCCeEEEEEEcCCCCCccchHHHHHHHHHHH
Q 046481 33 SYSCS-N--ENF-TANGRYQTNLNALMGYIYHQAPP---TGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTI 105 (247)
Q Consensus 33 ~~~C~-~--~~~-~~~s~f~~nl~~ll~~L~~~a~~---~~f~~~~~g~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~ 105 (247)
|+.|+ + +++ +++++|++||+.||+.|..+++. ++|++++.|.++++||||+||++|+++.+|+.||+.|+.++
T Consensus 1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~ 80 (106)
T PF01657_consen 1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI 80 (106)
T ss_dssp ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence 67898 3 567 57888999999999999998763 48999988889999999999999999999999999999999
Q ss_pred hhhCCCCcceEEEccceEEEEecccc
Q 046481 106 RKNCPYSKSAKIFYDNCMLKYSNDKF 131 (247)
Q Consensus 106 ~~~C~~~~~a~i~~~~C~lRYs~~~f 131 (247)
++.|+.+++|+||+++|+||||+++|
T Consensus 81 ~~~C~~~~g~~v~~~~C~lRY~~~~F 106 (106)
T PF01657_consen 81 SSCCPGSRGGRVWYDSCFLRYENYPF 106 (106)
T ss_dssp HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred HHhCCCCceEEEECCCEEEEEECCCC
Confidence 99999999999999999999999998
|
The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D. |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 247 | |||
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 8e-29 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 3e-22 |
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 247 | |||
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.96 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.96 | |
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.95 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.94 |
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-30 Score=194.00 Aligned_cols=103 Identities=20% Similarity=0.485 Sum_probs=93.9
Q ss_pred CCccccCCCCCcccCCcHHHHHHHHHHHHhHhcCCC--CCccccccC-CCCCeEEEEEEcCCCCCccchHHHHHHHHHHH
Q 046481 29 VDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPP--TGFGIGSLG-KNPIQANGLALCRGDVSASDCKTCVADAISTI 105 (247)
Q Consensus 29 ~~~~~~~C~~~~~~~~s~f~~nl~~ll~~L~~~a~~--~~f~~~~~g-~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~ 105 (247)
.+++++.|+.++++++++|++||+.||+.|+++++. .+|+++..| .++++||||+|||||+++++|+.||+.|+.++
T Consensus 3 t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~ 82 (108)
T 3a2e_A 3 TAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRI 82 (108)
T ss_dssp CCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTH
T ss_pred cceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 456788998899999999999999999999998864 356776665 46799999999999999999999999999999
Q ss_pred hhhCCCCcceEEEccceEEEEecccc
Q 046481 106 RKNCPYSKSAKIFYDNCMLKYSNDKF 131 (247)
Q Consensus 106 ~~~C~~~~~a~i~~~~C~lRYs~~~f 131 (247)
++.||++++|+||+++|+||||+++|
T Consensus 83 ~~~C~~~~g~~i~~~~C~lRY~~~~F 108 (108)
T 3a2e_A 83 FSICNNAIGARVQLVDCFIQYEQRSF 108 (108)
T ss_dssp HHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred HHHCCCCceEEEECCCEEEEEeCCcC
Confidence 99999999999999999999999998
|
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00