Citrus Sinensis ID: 046481


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
MSSPRVSSTFSLLISFALLLQTVTFGANVDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPFAKA
ccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEccccEEEEcccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEcccccEEEEEEEEcccccHHHHHHHHHHHHHHccccccccccEEEEcccEEEEEcccccccc
ccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccccccccEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccEccccEccccccccEEEEEEEccccccHHHHHHHHHHHHHHcHHHcccccccEEEccccEEEEEEEccccc
mssprvssTFSLLISFALLLQTVtfganvdpisyscsnenftangRYQTNLNALMGYiyhqapptgfgigslgknpiqanglalcrgdvsasdckTCVADAISTirkncpysksakifydncmlkysndkffgqidngTKYFMWNVnnvgypvifNQKSKDLLRQLADEasgkpklyaagelelnegskkKIYGLAQCtrdlsyndcKMGLDRiisdlprccdgkqggrvvtgsctiryeiypfaka
MSSPRVSSTFSLLISFALLLQTVTFGANVDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAistirkncpysksAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAgelelnegskkKIYGLAQCTRDLSYNDCKMGLDRIISdlprccdgkqggrvvtgsctiryeiypfaka
MSSPRVSSTFSLLISFALLLQTVTFGANVDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPFAKA
********TFSLLISFALLLQTVTFGANVDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLR***********LYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPF***
******S*TFSLLISFALLLQTVTFGANVDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPFAKA
*********FSLLISFALLLQTVTFGANVDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPFAKA
***PRVSSTFSLLISFALLLQTVTFGANVDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPFAKA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSSPRVSSTFSLLISFALLLQTVTFGANVDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPFAKA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query247 2.2.26 [Sep-21-2011]
Q9LRJ9252 Cysteine-rich repeat secr yes no 0.825 0.809 0.488 3e-55
Q9M2I5258 Putative cysteine-rich re no no 0.975 0.934 0.382 4e-45
Q9LRL8256 Putative cysteine-rich re no no 0.975 0.941 0.384 5e-40
Q9LRK9257 Putative cysteine-rich re no no 0.931 0.894 0.348 3e-35
P0CJ61256 Cysteine-rich repeat secr no no 0.983 0.949 0.348 1e-34
P0CJ60256 Cysteine-rich repeat secr no no 0.983 0.949 0.348 1e-34
P0CJ59256 Cysteine-rich repeat secr no no 0.983 0.949 0.348 1e-34
P0CJ58256 Cysteine-rich repeat secr no no 0.983 0.949 0.348 1e-34
P0CJ57256 Cysteine-rich repeat secr no no 0.983 0.949 0.348 1e-34
P0CJ56256 Cysteine-rich repeat secr no no 0.983 0.949 0.348 1e-34
>sp|Q9LRJ9|CRR38_ARATH Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1 Back     alignment and function desciption
 Score =  215 bits (547), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 102/209 (48%), Positives = 139/209 (66%), Gaps = 5/209 (2%)

Query: 41  FTANGRYQTNLNALMGYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVAD 100
           FT+   Y++NLN L   + ++ P TGF   S G  P   NGLALCRGD S+SDC++C+  
Sbjct: 46  FTSKSLYESNLNNLFSQLSYKVPSTGFAASSTGNTPNNVNGLALCRGDASSSDCRSCLET 105

Query: 101 AISTIRKNCPYSKSAKIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSK 160
           AI  +R+ CP +K+  ++YDNC++KYS+  FFG+ID   +++++NV NV  P  FN ++K
Sbjct: 106 AIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFENRFYLYNVKNVSDPSTFNSQTK 165

Query: 161 DLLRQLADEASGK--PKLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDL 218
            LL +L  +A+ +   KL+A GE  +    K K+YGL QCTRDL    CK  L+ II +L
Sbjct: 166 ALLTELTKKATTRDNQKLFATGEKNI---GKNKLYGLVQCTRDLKSITCKACLNGIIGEL 222

Query: 219 PRCCDGKQGGRVVTGSCTIRYEIYPFAKA 247
           P CCDGK+GGRVV GSC  RYEIYPF K 
Sbjct: 223 PNCCDGKEGGRVVGGSCNFRYEIYPFVKT 251





Arabidopsis thaliana (taxid: 3702)
>sp|Q9M2I5|CRR61_ARATH Putative cysteine-rich repeat secretory protein 61 OS=Arabidopsis thaliana GN=CRRSP61 PE=3 SV=1 Back     alignment and function description
>sp|Q9LRL8|CRR21_ARATH Putative cysteine-rich repeat secretory protein 21 OS=Arabidopsis thaliana GN=CRRSP21 PE=5 SV=2 Back     alignment and function description
>sp|Q9LRK9|CRR28_ARATH Putative cysteine-rich repeat secretory protein 28 OS=Arabidopsis thaliana GN=CRRSP28 PE=5 SV=2 Back     alignment and function description
>sp|P0CJ61|CRR54_ARATH Cysteine-rich repeat secretory protein 54 OS=Arabidopsis thaliana GN=CRRSP54 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ60|CRR53_ARATH Cysteine-rich repeat secretory protein 53 OS=Arabidopsis thaliana GN=CRRSP53 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ59|CRR52_ARATH Cysteine-rich repeat secretory protein 52 OS=Arabidopsis thaliana GN=CRRSP52 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ58|CRR51_ARATH Cysteine-rich repeat secretory protein 51 OS=Arabidopsis thaliana GN=CRRSP51 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ57|CRR50_ARATH Cysteine-rich repeat secretory protein 50 OS=Arabidopsis thaliana GN=CRRSP50 PE=3 SV=1 Back     alignment and function description
>sp|P0CJ56|CRR49_ARATH Cysteine-rich repeat secretory protein 49 OS=Arabidopsis thaliana GN=CRRSP49 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query247
224095758242 predicted protein [Populus trichocarpa] 0.951 0.971 0.614 2e-80
224093230242 predicted protein [Populus trichocarpa] 0.975 0.995 0.616 2e-80
224093228242 predicted protein [Populus trichocarpa] 0.975 0.995 0.612 3e-79
224132594242 predicted protein [Populus trichocarpa] 0.943 0.962 0.641 9e-79
224132974242 predicted protein [Populus trichocarpa] 0.931 0.950 0.622 2e-76
255549325240 DUF26 domain-containing protein 2 precur 0.959 0.987 0.607 6e-75
224132966214 predicted protein [Populus trichocarpa] 0.846 0.976 0.639 3e-73
225447364252 PREDICTED: cysteine-rich repeat secretor 0.959 0.940 0.584 8e-73
297739322266 unnamed protein product [Vitis vinifera] 0.959 0.890 0.584 9e-73
255585783243 DUF26 domain-containing protein 2 precur 0.931 0.946 0.595 4e-72
>gi|224095758|ref|XP_002310467.1| predicted protein [Populus trichocarpa] gi|222853370|gb|EEE90917.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/241 (61%), Positives = 183/241 (75%), Gaps = 6/241 (2%)

Query: 8   STFSLLISFALLLQTVTFGANVDPISYSCSN-ENFTANGRYQTNLNALMGYIYHQAPPTG 66
           ++F  L++F+LL+ T   G   DP+ + CS  ENFTANG Y++NLN L  ++Y+QAP TG
Sbjct: 7   ASFLCLLAFSLLVHT---GFEADPLFHFCSTPENFTANGPYESNLNKLTSFLYYQAPRTG 63

Query: 67  FGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKY 126
           FG+GS G+ P+QA GLALCRGD S SDCKTCV +A S IRK CPY+++A I+YDNC+LKY
Sbjct: 64  FGMGSKGQKPVQAYGLALCRGDASTSDCKTCVVEAGSEIRKRCPYNEAAIIWYDNCLLKY 123

Query: 127 SNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKPKLYAAGELELNE 186
           SN  FFGQIDNG K++MWNVN V  PV FN+K+K+LL QLA++A   PKLYA G +EL E
Sbjct: 124 SNKGFFGQIDNGNKFYMWNVNAVSEPVPFNEKTKELLTQLANKAKATPKLYATGGMELGE 183

Query: 187 GSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTGSCTIRYEIYPFAK 246
            +  K+YGL QCTRDLS   CK  LD II +LP CCDGK+GGRVV+GSC  RYEIYPF  
Sbjct: 184 ST--KLYGLVQCTRDLSSAVCKKCLDGIIGELPSCCDGKEGGRVVSGSCNFRYEIYPFVN 241

Query: 247 A 247
           A
Sbjct: 242 A 242




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093230|ref|XP_002309844.1| predicted protein [Populus trichocarpa] gi|222852747|gb|EEE90294.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224093228|ref|XP_002309843.1| predicted protein [Populus trichocarpa] gi|222852746|gb|EEE90293.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132594|ref|XP_002327834.1| predicted protein [Populus trichocarpa] gi|222837243|gb|EEE75622.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132974|ref|XP_002327925.1| predicted protein [Populus trichocarpa] gi|222837334|gb|EEE75713.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255549325|ref|XP_002515716.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223545153|gb|EEF46663.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224132966|ref|XP_002327923.1| predicted protein [Populus trichocarpa] gi|222837332|gb|EEE75711.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447364|ref|XP_002274745.1| PREDICTED: cysteine-rich repeat secretory protein 38-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297739322|emb|CBI28973.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255585783|ref|XP_002533571.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223526548|gb|EEF28806.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query247
TAIR|locus:2095662252 AT3G22060 "AT3G22060" [Arabido 0.983 0.964 0.454 4.3e-54
TAIR|locus:2085470258 AT3G58310 "AT3G58310" [Arabido 0.975 0.934 0.390 3.5e-43
TAIR|locus:2095642256 AT3G21990 "AT3G21990" [Arabido 0.983 0.949 0.356 2.8e-34
TAIR|locus:2065878255 AT2G31620 "AT2G31620" [Arabido 0.967 0.937 0.350 9.5e-34
TAIR|locus:2166091263 AT5G48540 "AT5G48540" [Arabido 0.943 0.885 0.343 3.3e-31
TAIR|locus:2115728 675 CRK25 "cysteine-rich RLK (RECE 0.963 0.352 0.355 4.6e-31
TAIR|locus:2095632258 AT3G22050 "AT3G22050" [Arabido 0.931 0.891 0.337 6.9e-31
TAIR|locus:2095582 441 AT3G21960 [Arabidopsis thalian 0.813 0.455 0.359 4.4e-29
TAIR|locus:2830202260 AT3G21945 "AT3G21945" [Arabido 0.967 0.919 0.334 5.6e-29
TAIR|locus:2095617257 AT3G22040 "AT3G22040" [Arabido 0.789 0.758 0.355 5.6e-29
TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 115/253 (45%), Positives = 162/253 (64%)

Query:     1 MSSPRVSSTFSLL-ISFALL-LQTV-TFGANVDPISYSCSN-E-NFTANGRYQTNLNALM 55
             MSS +    F +L I+  +L + TV +   N   + + CS+ E +FT+   Y++NLN L 
Sbjct:     1 MSSLKRIVWFPILAIAIQILSIHTVLSQSQNNAFLFHKCSDIEGSFTSKSLYESNLNNLF 60

Query:    56 GYIYHQAPPTGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTIRKNCPYSKSA 115
               + ++ P TGF   S G  P   NGLALCRGD S+SDC++C+  AI  +R+ CP +K+ 
Sbjct:    61 SQLSYKVPSTGFAASSTGNTPNNVNGLALCRGDASSSDCRSCLETAIPELRQRCPNNKAG 120

Query:   116 KIFYDNCMLKYSNDKFFGQIDNGTKYFMWNVNNVGYPVIFNQKSKDLLRQLADEASGKP- 174
              ++YDNC++KYS+  FFG+ID   +++++NV NV  P  FN ++K LL +L  +A+ +  
Sbjct:   121 IVWYDNCLVKYSSTNFFGKIDFENRFYLYNVKNVSDPSTFNSQTKALLTELTKKATTRDN 180

Query:   175 -KLYAAGELELNEGSKKKIYGLAQCTRDLSYNDCKMGLDRIISDLPRCCDGKQGGRVVTG 233
              KL+A GE  +    K K+YGL QCTRDL    CK  L+ II +LP CCDGK+GGRVV G
Sbjct:   181 QKLFATGEKNIG---KNKLYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGRVVGG 237

Query:   234 SCTIRYEIYPFAK 246
             SC  RYEIYPF K
Sbjct:   238 SCNFRYEIYPFVK 250




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0009737 "response to abscisic acid stimulus" evidence=IEP
GO:0002237 "response to molecule of bacterial origin" evidence=RCA
TAIR|locus:2085470 AT3G58310 "AT3G58310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095642 AT3G21990 "AT3G21990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065878 AT2G31620 "AT2G31620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166091 AT5G48540 "AT5G48540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095632 AT3G22050 "AT3G22050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095582 AT3G21960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2830202 AT3G21945 "AT3G21945" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095617 AT3G22040 "AT3G22040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LRJ9CRR38_ARATHNo assigned EC number0.48800.82590.8095yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 3e-24
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 2e-18
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score = 92.9 bits (231), Expect = 3e-24
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 3/102 (2%)

Query: 33  SYSCSNENFTANGRYQTNLNALMGYIYHQA---PPTGFGIGSLGKNPIQANGLALCRGDV 89
           S + S    TAN  +++NLNAL+  +   A      GF  G+ G  P    GLA CRGD+
Sbjct: 5   SSNTSGNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDL 64

Query: 90  SASDCKTCVADAISTIRKNCPYSKSAKIFYDNCMLKYSNDKF 131
           SASDC++C+A A+S +R+ CP  K  +I+YD+C L+Y +  F
Sbjct: 65  SASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 247
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.94
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.92
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.94  E-value=5.4e-27  Score=179.16  Aligned_cols=99  Identities=43%  Similarity=0.873  Sum_probs=76.8

Q ss_pred             ccCCC-C--Ccc-cCCcHHHHHHHHHHHHhHhcCCC---CCccccccCCCCCeEEEEEEcCCCCCccchHHHHHHHHHHH
Q 046481           33 SYSCS-N--ENF-TANGRYQTNLNALMGYIYHQAPP---TGFGIGSLGKNPIQANGLALCRGDVSASDCKTCVADAISTI  105 (247)
Q Consensus        33 ~~~C~-~--~~~-~~~s~f~~nl~~ll~~L~~~a~~---~~f~~~~~g~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~  105 (247)
                      |+.|+ +  +++ +++++|++||+.||+.|..+++.   ++|++++.|.++++||||+||++|+++.+|+.||+.|+.++
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~   80 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI   80 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence            67898 3  567 57888999999999999998763   48999988889999999999999999999999999999999


Q ss_pred             hhhCCCCcceEEEccceEEEEecccc
Q 046481          106 RKNCPYSKSAKIFYDNCMLKYSNDKF  131 (247)
Q Consensus       106 ~~~C~~~~~a~i~~~~C~lRYs~~~f  131 (247)
                      ++.|+.+++|+||+++|+||||+++|
T Consensus        81 ~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   81 SSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHhCCCCceEEEECCCEEEEEECCCC
Confidence            99999999999999999999999998



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 8e-29
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 3e-22

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query247
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.96
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.96
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.95
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.94
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.96  E-value=9.5e-30  Score=194.00  Aligned_cols=103  Identities=20%  Similarity=0.485  Sum_probs=93.9

Q ss_pred             CCccccCCCCCcccCCcHHHHHHHHHHHHhHhcCCC--CCccccccC-CCCCeEEEEEEcCCCCCccchHHHHHHHHHHH
Q 046481           29 VDPISYSCSNENFTANGRYQTNLNALMGYIYHQAPP--TGFGIGSLG-KNPIQANGLALCRGDVSASDCKTCVADAISTI  105 (247)
Q Consensus        29 ~~~~~~~C~~~~~~~~s~f~~nl~~ll~~L~~~a~~--~~f~~~~~g-~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~  105 (247)
                      .+++++.|+.++++++++|++||+.||+.|+++++.  .+|+++..| .++++||||+|||||+++++|+.||+.|+.++
T Consensus         3 t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~   82 (108)
T 3a2e_A            3 TAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRI   82 (108)
T ss_dssp             CCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTH
T ss_pred             cceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            456788998899999999999999999999998864  356776665 46799999999999999999999999999999


Q ss_pred             hhhCCCCcceEEEccceEEEEecccc
Q 046481          106 RKNCPYSKSAKIFYDNCMLKYSNDKF  131 (247)
Q Consensus       106 ~~~C~~~~~a~i~~~~C~lRYs~~~f  131 (247)
                      ++.||++++|+||+++|+||||+++|
T Consensus        83 ~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           83 FSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHCCCCceEEEECCCEEEEEeCCcC
Confidence            99999999999999999999999998



>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00