Citrus Sinensis ID: 046531

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
MDIYDTSRTTTQIVTDYHRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAET
ccccccccccccccccccHHHHHHHcccccccHHHHHHcccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHcc
cEEEccccccccccccccHHHHHHHcccccHcHHHHHHcccccccHHcEcccHHccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHcccccccEEEEccccccccccccccHHEEEEEccccccccHHHccHHHHHHHHHHHHHHHHHccc
mdiydtsrtttQIVTDYHRakevqafddtkagVKGLVDagivniprifirppeELVEELTShqtnfqvpvidldgvrgnkLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEfytrdrtrnvrfnsnfdlhysrtanwrdTLTISALastdldpneypeVCRDAVREYIKNVTKLAET
mdiydtsrtttqivtdyhrakevqafddtkagvKGLVDAGIVNIPRIFIRPPEELVEELTshqtnfqvpvidldgvRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKkefytrdrtrnvrfnsnfdlhysrtanwrdTLTISAlastdldpneyPEVCRDAVREYIKNVTKLAET
MDIYDTSRTTTQIVTDYHRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAET
**********TQIVTDYHRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNV******
**********************VQAFDDTKAGVKGLVDAGIVNIPRIFIRPP*************FQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKK**********VRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAET
*********TTQIVTDYHRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAET
**************TDYHRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLA**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDIYDTSRTTTQIVTDYHRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAET
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query196 2.2.26 [Sep-21-2011]
Q84MB3 365 1-aminocyclopropane-1-car yes no 0.897 0.482 0.474 2e-43
P10967 363 1-aminocyclopropane-1-car N/A no 0.897 0.484 0.472 1e-42
Q9SKK4 359 Probable 2-oxoacid depend no no 0.923 0.504 0.459 2e-41
Q8H1S4 369 1-aminocyclopropane-1-car no no 0.872 0.463 0.453 2e-40
O04847 401 Deacetoxyvindoline 4-hydr N/A no 0.882 0.431 0.443 8e-40
P93824 360 1-aminocyclopropane-1-car no no 0.908 0.494 0.434 1e-39
Q9LSW7 365 1-aminocyclopropane-1-car no no 0.897 0.482 0.438 4e-39
Q9C5K7 369 1-aminocyclopropane-1-car no no 0.928 0.493 0.430 5e-39
Q9M2C4 370 1-aminocyclopropane-1-car no no 0.918 0.486 0.429 1e-38
Q43383 398 1-aminocyclopropane-1-car no no 0.897 0.442 0.445 5e-38
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function desciption
 Score =  175 bits (443), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/179 (47%), Positives = 115/179 (64%), Gaps = 3/179 (1%)

Query: 19  RAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRG 78
           R+  ++AFD+TK GVKGL+DAGI  IP IF  PP  L        ++F +P IDL G   
Sbjct: 13  RSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSSDFSIPTIDLKGGGT 72

Query: 79  NKL--EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDR 136
           + +    +V+++  AAE WGFFQV+NHGIP++VLE+MI+GIR+F+EQD E+KK FY+RD 
Sbjct: 73  DSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDP 132

Query: 137 TRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAE 195
              + ++SNFDL  S  ANWRDTL     A     P + P  C + + EY K V KL +
Sbjct: 133 ASKMVYSSNFDLFSSPAANWRDTLGCYT-APDPPRPEDLPATCGEMMIEYSKEVMKLGK 190

Arabidopsis thaliana (taxid: 3702)
>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKK4|GSL_ARATH Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1 Back     alignment and function description
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1 Back     alignment and function description
>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1 Back     alignment and function description
>sp|Q9M2C4|ACCH8_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 8 OS=Arabidopsis thaliana GN=At3g61400 PE=2 SV=1 Back     alignment and function description
>sp|Q43383|ACCH5_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
225433023 363 PREDICTED: 1-aminocyclopropane-1-carboxy 0.923 0.498 0.526 3e-50
225433013 319 PREDICTED: 1-aminocyclopropane-1-carboxy 0.918 0.564 0.537 6e-50
225433009 364 PREDICTED: 1-aminocyclopropane-1-carboxy 0.928 0.5 0.510 1e-49
302143399 678 unnamed protein product [Vitis vinifera] 0.954 0.275 0.521 3e-49
225446563 353 PREDICTED: 1-aminocyclopropane-1-carboxy 0.954 0.529 0.521 3e-49
359497517 368 PREDICTED: 1-aminocyclopropane-1-carboxy 0.969 0.516 0.507 7e-49
296083607 359 unnamed protein product [Vitis vinifera] 0.923 0.504 0.516 8e-49
255576838 363 Desacetoxyvindoline 4-hydroxylase, putat 0.908 0.490 0.545 9e-49
359477716 673 PREDICTED: 1-aminocyclopropane-1-carboxy 0.887 0.258 0.521 5e-48
224111004 366 predicted protein [Populus trichocarpa] 0.903 0.483 0.535 6e-48
>gi|225433023|ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/188 (52%), Positives = 133/188 (70%), Gaps = 7/188 (3%)

Query: 9   TTTQIVTDYHRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQV 68
           +TT+   DY RA E++AFD++K GVKGLVDAG+  +PR+FIRPP+   +      T F+ 
Sbjct: 5   STTKFSEDYDRASELKAFDESKEGVKGLVDAGVSKVPRMFIRPPDNSRD----CNTQFKF 60

Query: 69  PVIDLDGVRGNKL--EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVE 126
           PVIDL G+  + +  ++IV+ VR A+ETWG F VVNHGIP++VLEEM++G+ +F EQD E
Sbjct: 61  PVIDLHGMDSDPIRRKKIVEMVREASETWGLFTVVNHGIPVSVLEEMMDGVHRFYEQDNE 120

Query: 127 LKKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREY 186
           +KKEFYTRD TR V +NSNFDL+ S+ ANWRDT     +A   L+P E P  CRD + EY
Sbjct: 121 VKKEFYTRDLTRKVIYNSNFDLYVSKAANWRDTF-YCLMAPHPLNPQELPATCRDILMEY 179

Query: 187 IKNVTKLA 194
            + V +L 
Sbjct: 180 KEQVMRLG 187

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225433013|ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225433009|ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143399|emb|CBI21960.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446563|ref|XP_002276308.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497517|ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083607|emb|CBI23596.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576838|ref|XP_002529305.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] gi|223531229|gb|EEF33074.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359477716|ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224111004|ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
TAIR|locus:2040045 359 AT2G25450 [Arabidopsis thalian 0.903 0.493 0.469 5.3e-40
TAIR|locus:2052781 358 AT2G30830 [Arabidopsis thalian 0.903 0.494 0.480 8.7e-40
TAIR|locus:2009130 365 AT1G06620 [Arabidopsis thalian 0.897 0.482 0.474 1.8e-39
TAIR|locus:2052796 362 AT2G30840 [Arabidopsis thalian 0.903 0.488 0.475 2.3e-39
TAIR|locus:2018349 360 AT1G04350 [Arabidopsis thalian 0.908 0.494 0.434 5.5e-38
TAIR|locus:2009175 369 AT1G06650 [Arabidopsis thalian 0.908 0.482 0.443 1.9e-37
TAIR|locus:2176456 365 AT5G43440 [Arabidopsis thalian 0.892 0.479 0.441 3e-37
TAIR|locus:2009210 369 AT1G06640 [Arabidopsis thalian 0.943 0.501 0.437 1e-36
TAIR|locus:2148403 364 AT5G59530 [Arabidopsis thalian 0.908 0.489 0.454 1e-36
TAIR|locus:2148303 366 AT5G59540 [Arabidopsis thalian 0.857 0.459 0.471 1.7e-36
TAIR|locus:2040045 AT2G25450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 86/183 (46%), Positives = 125/183 (68%)

Query:    16 DYHRAKEVQAFDDTKAGVKGLVDAGIVNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDG 75
             +Y RA E++AFD+ K GVKGLVDAG+  +PRIF  P   +     +  T   +P IDL G
Sbjct:     4 NYDRASELKAFDEMKIGVKGLVDAGVTKVPRIFHNPHVNVANPKPT-STVVMIPTIDLGG 62

Query:    76 VRGNKL--EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYT 133
             V  + +  E +V +V+ A E +GFFQ +NHG+PL+V+E+MI GIR+F++QD E++K FYT
Sbjct:    63 VFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYT 122

Query:   134 RDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDP-NEYPEVCRDAVREYIKNVTK 192
             RD+T+ ++++SN DL+ S  A+WRDTL  S + + D+    + PEVC + + EY K V K
Sbjct:   123 RDKTKKLKYHSNADLYESPAASWRDTL--SCVMAPDVPKAQDLPEVCGEIMLEYSKEVMK 180

Query:   193 LAE 195
             LAE
Sbjct:   181 LAE 183
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010439 "regulation of glucosinolate biosynthetic process" evidence=IMP
GO:0019761 "glucosinolate biosynthetic process" evidence=IMP
GO:0009506 "plasmodesma" evidence=IDA
GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS
TAIR|locus:2052781 AT2G30830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018349 AT1G04350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009175 AT1G06650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176456 AT5G43440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009210 AT1G06640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-22
PLN02393 362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 3e-21
PLN02947 374 PLN02947, PLN02947, oxidoreductase 5e-20
PLN02639 337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 8e-18
PLN02912 348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 4e-17
PLN03178 360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-16
PLN02758 361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-14
PLN02403 303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 4e-13
PLN02276 361 PLN02276, PLN02276, gibberellin 20-oxidase 7e-13
PLN02750 345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-11
COG3491 322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-11
PLN02904 357 PLN02904, PLN02904, oxidoreductase 6e-11
PLN02704 335 PLN02704, PLN02704, flavonol synthase 8e-11
PLN02254 358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-09
PLN02299 321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 5e-09
PLN02515 358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 1e-08
PLN02216 357 PLN02216, PLN02216, protein SRG1 4e-08
PLN02365 300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 4e-08
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-07
PLN02997 325 PLN02997, PLN02997, flavonol synthase 3e-05
PTZ00273 320 PTZ00273, PTZ00273, oxidase reductase; Provisional 6e-05
PLN00417 348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 9e-05
PLN02984 341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-04
PLN02156 335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 0.004
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information 
 Score = 86.2 bits (214), Expect = 3e-22
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 5/114 (4%)

Query: 68  VPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVEL 127
           +PVIDL G   ++   +  ++  A   WGFFQ+VNHGIP  +++ + E  R+F    +E 
Sbjct: 1   IPVIDLSGDPEDR-AAVAAELGEACREWGFFQLVNHGIPEELIDRLFEAAREFFALPLEE 59

Query: 128 KKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTD----LDPNEYPE 177
           K ++      R             +  +W+++  +      D      PN +P+
Sbjct: 60  KLKYARSGGNRGYGSLGAEKTDGKKVLDWKESFDLGREPPEDDPPLRGPNLWPD 113

This is the highly conserved N-terminal region of proteins with 2-oxoglutarate/Fe(II)-dependent dioxygenase activity. Length = 113
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 196
PLN02947 374 oxidoreductase 100.0
PLN02904 357 oxidoreductase 100.0
PLN02758 361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216 357 protein SRG1 100.0
PLN02393 362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02912 348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178 360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02639 337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254 358 gibberellin 3-beta-dioxygenase 99.98
PLN02515 358 naringenin,2-oxoglutarate 3-dioxygenase 99.97
PLN02704 335 flavonol synthase 99.97
PLN02276 361 gibberellin 20-oxidase 99.97
PLN00417 348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.97
KOG0143 322 consensus Iron/ascorbate family oxidoreductases [S 99.97
PLN02750 345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.96
PTZ00273 320 oxidase reductase; Provisional 99.95
COG3491 322 PcbC Isopenicillin N synthase and related dioxygen 99.95
PLN02485 329 oxidoreductase 99.95
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.95
PLN02299 321 1-aminocyclopropane-1-carboxylate oxidase 99.95
PLN02997 325 flavonol synthase 99.94
PLN03002 332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.94
PLN03176120 flavanone-3-hydroxylase; Provisional 99.94
PLN02403 303 aminocyclopropanecarboxylate oxidase 99.94
PLN02156 335 gibberellin 2-beta-dioxygenase 99.93
PLN02984 341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.92
PLN02365 300 2-oxoglutarate-dependent dioxygenase 99.92
PLN03001 262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.12
PRK08333184 L-fuculose phosphate aldolase; Provisional 81.74
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=3.4e-35  Score=254.88  Aligned_cols=166  Identities=30%  Similarity=0.522  Sum_probs=132.9

Q ss_pred             cccHHHHHHCCCCCCCCcccCCCCCchhhhcc----CCCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCC
Q 046531           30 KAGVKGLVDAGIVNIPRIFIRPPEELVEELTS----HQTNFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI  105 (196)
Q Consensus        30 ~~~v~~l~~~g~~~vP~~yv~p~~~~~~~~~~----~~~~~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI  105 (196)
                      .++|+.|+++|..+||+.|++|++++|.....    .....+||||||+.+.+..+..++++|++||++||||||+||||
T Consensus        25 ~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI  104 (374)
T PLN02947         25 QKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGV  104 (374)
T ss_pred             ecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCC
Confidence            35899999999999999999999888753110    01445799999998853357789999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCCcccccCCCCcccccCcChhhhhccccccCCCCCCCCCc---hHHHHH
Q 046531          106 PLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSNFDLHYSRTANWRDTLTISALASTDLDPNEYP---EVCRDA  182 (196)
Q Consensus       106 ~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~f~~~~~~p~~~~~~~~P---~~fr~~  182 (196)
                      |.++++++++.+++||+||.|+|+++...+.....||+........+..+|+|.|.+. ..|....++.||   ++||++
T Consensus       105 p~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~-~~p~~~~~~~WP~~~~~fr~~  183 (374)
T PLN02947        105 PSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLV-CHPLSDVLPHWPSSPADLRKV  183 (374)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeee-cCCcccccccCccchHHHHHH
Confidence            9999999999999999999999999864433334678655433345668999999877 566432334565   689999


Q ss_pred             HHHHHHHHHHhhhC
Q 046531          183 VREYIKNVTKLAET  196 (196)
Q Consensus       183 ~~~Y~~~~~~La~r  196 (196)
                      +++|+++|.+|+.+
T Consensus       184 ~~~Y~~~~~~L~~~  197 (374)
T PLN02947        184 AATYAKATKRLFLE  197 (374)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999864

>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PRK08333 L-fuculose phosphate aldolase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
1gp5_A 356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 7e-12
2brt_A 355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 8e-12
1gp4_A 356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-11
1w9y_A 319 The Structure Of Acc Oxidase Length = 319 1e-06
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 33  VKGLVDAGIVNIPRIFIRPPEEL-------VEELTSHQTNFQVPVIDLDGVRGN--KLEE 83
           V+ L  +GI++IP+ +IRP EEL       +EE    +   QVP IDL  +  +  K+ E
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEE--KKEDGPQVPTIDLKNIESDDEKIRE 64
Query: 84  -IVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVR- 141
             +++++ A+  WG   ++NHGIP +++E + +   +F    VE K+++     T  ++ 
Sbjct: 65  NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124
Query: 142 FNSNFDLHYSRTANWRDTLTISALASTDLDPNEYPEVCRD---AVREYIKNVTKLA 194
           + S    + S    W D     A      D + +P+   D   A  EY K +  LA
Sbjct: 125 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLA 180
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
1gp6_A 356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-53
1w9y_A 319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-38
1dcs_A 311 Deacetoxycephalosporin C synthase; ferrous oxygena 4e-21
1odm_A 331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-17
3oox_A 312 Putative 2OG-Fe(II) oxygenase family protein; stru 4e-16
3on7_A 280 Oxidoreductase, iron/ascorbate family; structural 8e-16
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  173 bits (441), Expect = 1e-53
 Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 33  VKGLVDAGIVNIPRIFIRPPEEL-----VEELTSHQTNFQVPVIDLDGVRGN---KLEEI 84
           V+ L  +GI++IP+ +IRP EEL     V      +   QVP IDL  +  +     E  
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 85  VDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVR-FN 143
           +++++ A+  WG   ++NHGIP +++E + +   +F    VE K+++     T  ++ + 
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126

Query: 144 SNFDLHYSRTANWRDTLTISALASTDLDPN---EYPEVCRDAVREYIKNVTKLAET 196
           S    + S    W D     A      D +   + P    +A  EY K +  LA  
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATK 182
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query196
1gp6_A 356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A 312 Putative 2OG-Fe(II) oxygenase family protein; stru 99.95
1w9y_A 319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 99.95
1dcs_A 311 Deacetoxycephalosporin C synthase; ferrous oxygena 99.95
3on7_A 280 Oxidoreductase, iron/ascorbate family; structural 99.94
1odm_A 331 Isopenicillin N synthase; antibiotic biosynthesis, 99.93
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.8e-35  Score=253.13  Aligned_cols=167  Identities=26%  Similarity=0.454  Sum_probs=132.8

Q ss_pred             ccccHHHHHHCCCCCCCCcccCCCCCchhhhc---cC--CCCCCcceeeCCCCCC-C--cHHHHHHHHHHHHHHcCceEE
Q 046531           29 TKAGVKGLVDAGIVNIPRIFIRPPEELVEELT---SH--QTNFQVPVIDLDGVRG-N--KLEEIVDQVRAAAETWGFFQV  100 (196)
Q Consensus        29 ~~~~v~~l~~~g~~~vP~~yv~p~~~~~~~~~---~~--~~~~~IPvIDls~~~~-~--~~~~~~~~l~~Ac~~~GFF~v  100 (196)
                      .+++||+|+++|+.+||++|++|+++++....   ..  ....+||||||+.+.+ +  .|.+++++|++||++||||||
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v   82 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL   82 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence            35689999999999999999999877664211   00  0124699999999864 3  467899999999999999999


Q ss_pred             eecCCCHHHHHHHHHHHHHHhcCCHHHHhhhhhcCC-CCcccccCCCCcccccCcChhhhhccccccCCC-CCCCCCc--
Q 046531          101 VNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDR-TRNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEYP--  176 (196)
Q Consensus       101 ~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~-~~~~GY~~~~~~~~~~~~d~~E~f~~~~~~p~~-~~~~~~P--  176 (196)
                      +||||+.++++++++.+++||+||.|+|+++..... ....||+........+..||+|+|+++ ..|.. ..++.||  
T Consensus        83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~-~~p~~~~~~~~wP~~  161 (356)
T 1gp6_A           83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHL-AYPEEKRDLSIWPKT  161 (356)
T ss_dssp             ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEE-EESGGGCCGGGSCCS
T ss_pred             eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeee-cCCccccccccCCCc
Confidence            999999999999999999999999999999864432 346799876554456678999999988 55531 1123344  


Q ss_pred             -hHHHHHHHHHHHHHHHhhhC
Q 046531          177 -EVCRDAVREYIKNVTKLAET  196 (196)
Q Consensus       177 -~~fr~~~~~Y~~~~~~La~r  196 (196)
                       ++||+++++|+++|.+|+.+
T Consensus       162 ~~~fr~~~~~y~~~~~~l~~~  182 (356)
T 1gp6_A          162 PSDYIEATSEYAKCLRLLATK  182 (356)
T ss_dssp             STTHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHHHHHHHHHH
Confidence             58999999999999999863
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 196
d1gp6a_ 349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-29
d1w9ya1 307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-20
d1dcsa_ 311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 9e-20
d1odma_ 329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 5e-14
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  108 bits (271), Expect = 3e-29
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 12/177 (6%)

Query: 31  AGVKGLVDAGIVNIPRIFIRPPEEL-----VEELTSHQTNFQVPVIDLDGVRGN---KLE 82
             V+ L  +GI++IP+ +IRP EEL     V      +   QVP IDL  +  +     E
Sbjct: 4   ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRE 63

Query: 83  EIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVR- 141
             +++++ A+  WG   ++NHGIP +++E + +   +F    VE K+++     T  ++ 
Sbjct: 64  NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 123

Query: 142 FNSNFDLHYSRTANWRDTLTISALASTDLDPN---EYPEVCRDAVREYIKNVTKLAE 195
           + S    + S    W D     A      D +   + P    +A  EY K +  LA 
Sbjct: 124 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 180
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query196
d1gp6a_ 349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1 307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 99.93
d1dcsa_ 311 Deacetoxycephalosporin C synthase {Streptomyces cl 99.91
d1odma_ 329 Isopenicillin N synthase {Emericella nidulans [Tax 99.86
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-34  Score=243.48  Aligned_cols=166  Identities=27%  Similarity=0.451  Sum_probs=128.8

Q ss_pred             cccHHHHHHCCCCCCCCcccCCCCCchhhh-----ccCCCCCCcceeeCCCCCCC---cHHHHHHHHHHHHHHcCceEEe
Q 046531           30 KAGVKGLVDAGIVNIPRIFIRPPEELVEEL-----TSHQTNFQVPVIDLDGVRGN---KLEEIVDQVRAAAETWGFFQVV  101 (196)
Q Consensus        30 ~~~v~~l~~~g~~~vP~~yv~p~~~~~~~~-----~~~~~~~~IPvIDls~~~~~---~~~~~~~~l~~Ac~~~GFF~v~  101 (196)
                      +..||+|+++|+.+||++||+|++++|.+.     .......+||||||+.+.++   .|++++++|++||++||||||+
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            458999999999999999999998887642     12345678999999998753   5788999999999999999999


Q ss_pred             ecCCCHHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCC-cccccCCCCcccccCcChhhhhccccccCC-CCCCCCCc---
Q 046531          102 NHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTR-NVRFNSNFDLHYSRTANWRDTLTISALAST-DLDPNEYP---  176 (196)
Q Consensus       102 nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~-~~GY~~~~~~~~~~~~d~~E~f~~~~~~p~-~~~~~~~P---  176 (196)
                      ||||+.++++++++++++||+||.|+|++|....... ..+|+...........+|.+.+... ..+. ...++.||   
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~n~wp~~~  161 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHL-AYPEEKRDLSIWPKTP  161 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEE-EESGGGCCGGGSCCSS
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhccc-cccccccccccccccc
Confidence            9999999999999999999999999999986433222 2345544444455667788775544 2222 11223333   


Q ss_pred             hHHHHHHHHHHHHHHHhhhC
Q 046531          177 EVCRDAVREYIKNVTKLAET  196 (196)
Q Consensus       177 ~~fr~~~~~Y~~~~~~La~r  196 (196)
                      +.|++.+.+|+++|.+|+++
T Consensus       162 ~~f~e~~~~~~~~~~~la~~  181 (349)
T d1gp6a_         162 SDYIEATSEYAKCLRLLATK  181 (349)
T ss_dssp             TTHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHh
Confidence            57999999999999999863
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure