Citrus Sinensis ID: 046652

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------52

MAGINCWSQQLGFAILISFVLCFVLLCFDYSALTSTTTTTSHSGHSTPLVNNFANANANAHAIITNSSDDSISPLPHNPLVIVLNQTEIDSCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILERIEQVRSSIRQGRGPGVGFADGDDYKYTFAPYGKES

cccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEccEEccEEEccccccHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHcccEEEccccccccccHHHHHHHHccEEEEEcccccccccccccccccccEEEEEEccccccccccHHHHHccccHHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc

cccEEcccccEEEEEEEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccHHHcHHHHHHHHcccccccccccHHHHccccccccccccccccccccccHcccHHHHHHHHHccHccccEEcccHHHccEEEEEcHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHcccccEEEEEccccccHccccccccccccHHEEccccccccEEEEEcccccccEEEccccccccccHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHcccEEEEccccEEEEcccccccccccEEEEEcHHHHHcccccHHHHHHcccHHHHHHHHHHHHHHcccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEcccccccc

MAGINCWSQQLGFAILISFVLCFVLLCFDysaltstttttshsghstplvnnFANANANAHAIitnssddsisplphnplviVLNQTEIDSCLGRyiyihqlpgrfnqdllknchlltpgtdknmcpylgnfgfgpgineeNQEIVLLNESWFLTNQFLLEVIFHNKmknyrcltndssiasaiyvpfyagldiGRYLFGGVStllrdssgLDLVKWLAEkpewkklwgrdHFLVAGRIAWDfrrqtdnesdwgskfrflpesknmsmLSIESsswnndfaipyptcfhpskeseiiGWQDRMRKRKRQYLFsfagaprpdlkgsirgkIIDQCLasgslcrlidcnygatncdnpvnVMKMFQNsvfclqppgdsytrksvFDTIlagcipvffhpgtAYAQYLWhlpknyssyslyipvrdvkdwRVNVNETLVGISEDRILALREQVVRLIPsviyadprskletLEDAFDLAVKGILERIEQVRSSIrqgrgpgvgfadgddykytfapygkes

MAGINCWSQQLGFAILISFVLCFVLLCFDYSALTSTTTTTSHSGHSTPLVNNFANANANAHAIITNSSDDSISPLPHNPLVIVLNQTEIDSCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEkpewkklwgrdHFLVAGRIAWdfrrqtdnesdwgskfrflpeskNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFsfagaprpdlkgsiRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETlvgisedrilALREQVVRLipsviyadprskleTLEDAFDLAVKGILERIEQVrssirqgrgpgvgfadgddyKYTFAPYGKES

MAGINCWSQQLGFAILISFVLCFVLLCFDYSALtstttttshsghstPLVnnfanananahaIITNSSDDSISPLPHNPLVIVLNQTEIDSCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILERIEQVRSSIRQGRGPGVGFADGDDYKYTFAPYGKES

***INCWSQQLGFAILISFVLCFVLLCFDYSALTSTT***********LVNNFANANANAHAIIT*********LPHNPLVIVLNQTEIDSCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFL*************SSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILERIEQVRSSIRQGRGPGVGFADGDDYKYTFA******

****NCWSQQLGFAILISFVLCFVLLCFDYSALTSTT******************************************************CLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILERIE****************ADGDDYKY**A******

MAGINCWSQQLGFAILISFVLCFVLLCFDYSALT***********STPLVNNFANANANAHAIITNSSDDSISPLPHNPLVIVLNQTEIDSCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILERIEQVRSSIRQGRGPGVGFADGDDYKYTFAPYGKES

MAGINCWSQQLGFAILISFVLCFVLLCFDYSALT********************************************************SCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILERIEQVRSSIRQGRGPGVGFADGDDYKYTFAP*****

iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		518	2.2.26 [Sep-21-2011]
Q8H038		588	Xyloglucan galactosyltran	yes	no	0.820	0.722	0.551	1e-144
Q7XJ98		619	Xyloglucan galactosyltran	no	no	0.812	0.680	0.542	1e-143
Q5IGR8		730	Exostosin-1a OS=Danio rer	yes	no	0.519	0.368	0.227	3e-05
Q5IGR7		741	Exostosin-1b OS=Danio rer	yes	no	0.538	0.376	0.230	4e-05
Q9SSE8		470	Probable glycosyltransfer	no	no	0.561	0.619	0.226	5e-05
Q5IGR6		737	Exostosin-1c OS=Danio rer	no	no	0.490	0.344	0.232	8e-05
Q5RBC3		746	Exostosin-1 OS=Pongo abel	yes	no	0.538	0.373	0.233	0.0001
A9X1C8		746	Exostosin-1 OS=Papio anub	N/A	no	0.538	0.373	0.233	0.0001
Q16394		746	Exostosin-1 OS=Homo sapie	yes	no	0.538	0.373	0.233	0.0001
A5D7I4		746	Exostosin-1 OS=Bos taurus	yes	no	0.538	0.373	0.233	0.0001

>sp\|Q8H038\|KATAM_ORYSJ Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1	Back alignment and function desciption

 Score =  512 bits (1319), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 240/435 (55%), Positives = 320/435 (73%), Gaps = 10/435 (2%)

Query: 86  QTEIDSCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEI 145
           + + D C GRYIY+H+LP RFN D+L+ C  L+  T  NMC ++ N G GP +   N+E 
Sbjct: 122 ENKSDPCGGRYIYVHELPPRFNDDMLRECERLSLWT--NMCKFMSNEGLGPPLG--NEEG 177

Query: 146 VLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFG-GVST 204
           V  N  W+ TNQF+++VIF N+MK Y CLT DSSIA+A++VPFYAG D+ RYL+G  +ST
Sbjct: 178 VFSNTGWYATNQFMVDVIFRNRMKQYECLTKDSSIAAAVFVPFYAGFDVARYLWGHNIST 237

Query: 205 LLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESK 264
             RD++ LDL+ WL ++PEW  + GRDHFLV GRIAWDFRR TD ESDWG+K  F+P +K
Sbjct: 238 --RDAASLDLIDWLRKRPEWNVMGGRDHFLVGGRIAWDFRRLTDEESDWGNKLLFMPAAK 295

Query: 265 NMSMLSIESSSWN-NDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDLK 323
           NMSML +ESS WN NDFAIPYPT FHP+K+++++ WQDRMR  +R +LFSFAGAPRPD  
Sbjct: 296 NMSMLVVESSPWNANDFAIPYPTYFHPAKDADVLLWQDRMRSLERPWLFSFAGAPRPDDP 355

Query: 324 GSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVF 383
            SIR ++IDQC  S S+C+L++C+ G + C +P  +M MFQNS+FCLQP GDSYTR+S F
Sbjct: 356 KSIRSQLIDQCRTS-SVCKLLECDLGESKCHSPSAIMNMFQNSLFCLQPQGDSYTRRSAF 414

Query: 384 DTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRI 443
           D++LAGCIPVFFHPG+AY QY WHLPKNY+ YS++IP   V+   V++ + L  I  D +
Sbjct: 415 DSMLAGCIPVFFHPGSAYVQYTWHLPKNYTRYSVFIPEDGVRKGNVSIEDRLKSIHPDMV 474

Query: 444 LALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILERIEQVRSSIRQGRGPGVGFAD 503
             +RE+V+ LIP VIYADPRSKLETL+DAFD++V+ I+ ++ Q+R  I +       F +
Sbjct: 475 KKMREEVISLIPRVIYADPRSKLETLKDAFDVSVEAIINKVTQLRRDIIEDHE-DKDFVE 533

Query: 504 GDDYKYTFAPYGKES 518
            + +KY     G+ +
Sbjct: 534 ENSWKYDLLEEGQRT 548

Involved in the attachment of the Gal residue on the third xylosyl unit within the XXXG core structure of xyloglucan, the principal glycan that interlaces the cellulose microfibrils in plant cell wall. Interacts with actin and is required for the proper endomembrane organization and for the cell elongation.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q7XJ98\|KATAM_ARATH Xyloglucan galactosyltransferase KATAMARI1 OS=Arabidopsis thaliana GN=KAM1 PE=1 SV=1	Back alignment and function description

>sp\|Q5IGR8\|EXT1A_DANRE Exostosin-1a OS=Danio rerio GN=ext1a PE=2 SV=1	Back alignment and function description

>sp\|Q5IGR7\|EXT1B_DANRE Exostosin-1b OS=Danio rerio GN=ext1b PE=2 SV=1	Back alignment and function description

>sp\|Q9SSE8\|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1	Back alignment and function description

>sp\|Q5IGR6\|EXT1C_DANRE Exostosin-1c OS=Danio rerio GN=ext1c PE=2 SV=1	Back alignment and function description

>sp\|Q5RBC3\|EXT1_PONAB Exostosin-1 OS=Pongo abelii GN=EXT1 PE=2 SV=1	Back alignment and function description

>sp\|A9X1C8\|EXT1_PAPAN Exostosin-1 OS=Papio anubis GN=EXT1 PE=3 SV=1	Back alignment and function description

>sp\|Q16394\|EXT1_HUMAN Exostosin-1 OS=Homo sapiens GN=EXT1 PE=1 SV=2	Back alignment and function description

>sp\|A5D7I4\|EXT1_BOVIN Exostosin-1 OS=Bos taurus GN=EXT1 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		518
255583521		535	Xyloglucan galactosyltransferase KATAMAR	0.971	0.940	0.656	0.0
224060331		519	predicted protein [Populus trichocarpa]	0.945	0.944	0.630	0.0
42566766		521	Exostosin family protein [Arabidopsis th	0.930	0.925	0.635	0.0
297804920		523	exostosin family protein [Arabidopsis ly	0.930	0.921	0.621	0.0
357462823		484	Xyloglucan galactosyltransferase KATAMAR	0.899	0.962	0.583	1e-175
356538053		474	PREDICTED: xyloglucan galactosyltransfer	0.806	0.881	0.665	1e-174
2244755		482	hypothetical protein [Arabidopsis thalia	0.870	0.935	0.599	1e-174
356569159		474	PREDICTED: xyloglucan galactosyltransfer	0.833	0.911	0.646	1e-173
449495258		490	PREDICTED: xyloglucan galactosyltransfer	0.918	0.971	0.583	1e-170
255555144		501	Xyloglucan galactosyltransferase KATAMAR	0.936	0.968	0.548	1e-161

>gi\|255583521\|ref\|XP_002532518.1\| Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] gi\|223527768\|gb\|EEF29870.1\| Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/530 (65%), Positives = 422/530 (79%), Gaps = 27/530 (5%)

Query: 6   CWSQQLGFAILISFVLCFVLLCFDYSALTSTTTTTSHSGHSTPLVNNFANANANAHA--- 62
           C + QL   IL+SFV CFVLLCFDYSALT T  +       T LVNN+ NA A   +   
Sbjct: 9   CCNNQLWLVILVSFVFCFVLLCFDYSALTGTQDSF------TVLVNNYENAVATQKSKSL 62

Query: 63  IITNSSDDSI-----------SPLPHNPLVIVLNQTEIDSCLGRYIYIHQLPGRFNQDLL 111
           ++ N+ +++             P P     +  N  + DSCLGRY+YIH++P +FNQ+LL
Sbjct: 63  LLPNNVNETTIRPNITGYIRKQPQPSREESVAENSVK-DSCLGRYVYIHEIPSKFNQELL 121

Query: 112 KNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNY 171
            NC  +T GT+ NMCPYL N G G  +  EN + VLLN+SW+ TNQFLLEVIFHN+MK Y
Sbjct: 122 DNCESITRGTEHNMCPYLVNSGLG--VEVENSQRVLLNKSWYSTNQFLLEVIFHNRMKKY 179

Query: 172 RCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRD 231
            CLTNDSS+ASAIYVPFYAGLD+ RYL+G V T +RD S  DL+KWL ++PEWKK+ GRD
Sbjct: 180 ECLTNDSSLASAIYVPFYAGLDVSRYLWG-VKTSIRDQSAFDLMKWLVQRPEWKKMLGRD 238

Query: 232 HFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPS 291
           HFL+AGRIAWDFRRQTDNESDWGSKFRFLPES NMSML+IESSSWNND+AIPYPTCFHPS
Sbjct: 239 HFLIAGRIAWDFRRQTDNESDWGSKFRFLPESNNMSMLAIESSSWNNDYAIPYPTCFHPS 298

Query: 292 KESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGAT 351
           KESE+  WQD+MR + R YLFSFAGAPRPDL+ S+RGKII++C AS SLC+L++C+YGA 
Sbjct: 299 KESEVSQWQDKMRNQTRPYLFSFAGAPRPDLQESVRGKIIEECQASKSLCKLLECDYGAN 358

Query: 352 ---NCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHL 408
              NCDNPVNVM++FQNSV+CLQP GDSYTR+S+FD+ILAGCIPVFFHPGTAYAQY WHL
Sbjct: 359 GAINCDNPVNVMRLFQNSVYCLQPTGDSYTRRSIFDSILAGCIPVFFHPGTAYAQYKWHL 418

Query: 409 PKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLET 468
           PKNYS YS+YIPVRDVK+W+  +NETL+ I EDR+LA+RE+V+++IPS+IYADPRS++ET
Sbjct: 419 PKNYSKYSVYIPVRDVKEWKAGINETLLRIPEDRVLAMREEVIKIIPSIIYADPRSRMET 478

Query: 469 LEDAFDLAVKGILERIEQVRSSIRQGRGPGVGFADGDDYKYTFAPYGKES 518
            EDAFDLAVKGILERIE+V    ++G+ P +GFADGDDYKYTF+ Y  E+
Sbjct: 479 TEDAFDLAVKGILERIERVTKVTKEGKDPSIGFADGDDYKYTFSGYLGET 528

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224060331\|ref\|XP_002300146.1\| predicted protein [Populus trichocarpa] gi\|222847404\|gb\|EEE84951.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|42566766\|ref\|NP_193135.2\| Exostosin family protein [Arabidopsis thaliana] gi\|29824391\|gb\|AAP04155.1\| unknown protein [Arabidopsis thaliana] gi\|332657957\|gb\|AEE83357.1\| Exostosin family protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297804920\|ref\|XP_002870344.1\| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi\|297316180\|gb\|EFH46603.1\| exostosin family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|357462823\|ref\|XP_003601693.1\| Xyloglucan galactosyltransferase KATAMARI1 [Medicago truncatula] gi\|355490741\|gb\|AES71944.1\| Xyloglucan galactosyltransferase KATAMARI1 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356538053\|ref\|XP_003537519.1\| PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Glycine max]	Back alignment and taxonomy information

>gi\|2244755\|emb\|CAB10178.1\| hypothetical protein [Arabidopsis thaliana] gi\|7268103\|emb\|CAB78441.1\| hypothetical protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356569159\|ref\|XP_003552773.1\| PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Glycine max]	Back alignment and taxonomy information

>gi\|449495258\|ref\|XP_004159780.1\| PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|255555144\|ref\|XP_002518609.1\| Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] gi\|223542208\|gb\|EEF43751.1\| Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		518
TAIR\|locus:2129281		521	AT4G13990 "AT4G13990" [Arabido	0.845	0.840	0.667	9.2e-178
TAIR\|locus:2039002		619	MUR3 "AT2G20370" [Arabidopsis	0.812	0.680	0.542	4.4e-132
TAIR\|locus:2066091		720	AT2G29040 "AT2G29040" [Arabido	0.795	0.572	0.549	3.6e-128
TAIR\|locus:2046372		509	AT2G32750 "AT2G32750" [Arabido	0.785	0.799	0.526	1.9e-122
TAIR\|locus:2045527		479	AT2G31990 "AT2G31990" [Arabido	0.768	0.830	0.543	3.2e-120
TAIR\|locus:2046387		468	GT13 "AT2G32740" [Arabidopsis	0.774	0.856	0.506	7.3e-114
TAIR\|locus:2155110		561	AT5G41250 "AT5G41250" [Arabido	0.735	0.679	0.417	2e-86
TAIR\|locus:2167933		517	GT18 "AT5G62220" [Arabidopsis	0.801	0.802	0.401	2e-86
TAIR\|locus:2031346		664	RHS8 "AT1G63450" [Arabidopsis	0.747	0.582	0.422	1.8e-85
TAIR\|locus:2201297		455	AT1G68470 "AT1G68470" [Arabido	0.714	0.813	0.419	2.9e-80

TAIR\|locus:2129281 AT4G13990 "AT4G13990" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1662 (590.1 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
 Identities = 299/448 (66%), Positives = 364/448 (81%)

Query:    67 SSDDSISPLPHNPLVIVLNQTEIDSCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMC 126
             + DD+ S  P +P       +   SC GRYIY+H+LP RFN DLL NC  +T GT+K++C
Sbjct:    77 TKDDNFSRFPDDP-------SPDSSCSGRYIYVHELPYRFNGDLLDNCFKITRGTEKDIC 129

Query:   127 PYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYV 186
             PY+ N+GFGP I  +N E VLL +SWF TNQF+LEVIFHNKM NYRCLTNDSS+ASA++V
Sbjct:   130 PYIENYGFGPVI--KNYENVLLKQSWFTTNQFMLEVIFHNKMINYRCLTNDSSLASAVFV 187

Query:   187 PFYAGLDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQ 246
             PFYAGLD+ RYL+G  +  +RDSS  +L+ WL  + EW ++ GRDHFLV+GRIAWDFRRQ
Sbjct:   188 PFYAGLDMSRYLWG-FNITVRDSSSHELMDWLVVQKEWGRMSGRDHFLVSGRIAWDFRRQ 246

Query:   247 TDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKR 306
             TDNESDWGSK RFLPES+NMSMLSIESSSW ND+AIPYPTCFHP    EI+ WQ+ MR R
Sbjct:   247 TDNESDWGSKLRFLPESRNMSMLSIESSSWKNDYAIPYPTCFHPRSVDEIVEWQELMRSR 306

Query:   307 KRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNS 366
             KR+YLF+FAGAPRP+ K S+RGKIID+CL S   C L+DCNYG  NCDNPVNVMK+F+NS
Sbjct:   307 KREYLFTFAGAPRPEYKDSVRGKIIDECLESKKQCYLLDCNYGNVNCDNPVNVMKVFRNS 366

Query:   367 VFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKD 426
             VFCLQPPGDSYTR+S+FD+ILAGCIPVFFHPGTAYAQY WHLPKN+SSYS+Y+PV+DVK+
Sbjct:   367 VFCLQPPGDSYTRRSMFDSILAGCIPVFFHPGTAYAQYKWHLPKNHSSYSVYLPVKDVKE 426

Query:   427 WRVNVNETLVGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKGILERIEQ 486
             W + + E L+ I E+R++ LRE+V+RLIP V+YADP+   +  EDAF+LAVKG+LERIE+
Sbjct:   427 WNIKIKERLIEIPEERVVRLREEVIRLIPKVVYADPKYGSDGSEDAFELAVKGMLERIEE 486

Query:   487 VRSSIRQGRGPGVGFADGDDYKYTFAPY 514
             VR  +RQG+    GF D DDYKYTF+PY
Sbjct:   487 VREMMRQGKDGSDGFDDRDDYKYTFSPY 514

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005618 "cell wall" evidence=IDA

TAIR\|locus:2039002 MUR3 "AT2G20370" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2066091 AT2G29040 "AT2G29040" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046372 AT2G32750 "AT2G32750" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045527 AT2G31990 "AT2G31990" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046387 GT13 "AT2G32740" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2155110 AT5G41250 "AT5G41250" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2167933 GT18 "AT5G62220" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2031346 RHS8 "AT1G63450" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2201297 AT1G68470 "AT1G68470" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H038	KATAM_ORYSJ	2, ., 4, ., 1, ., -	0.5517	0.8204	0.7227	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT4G13990	exostosin family protein; exostosin family protein; FUNCTIONS IN- catalytic activity; INVOLVED IN- biological_process unknown; LOCATED IN- cell wall, membrane; EXPRESSED IN- 18 plant structures; EXPRESSED DURING- 7 growth stages; CONTAINS InterPro DOMAIN/s- Exostosin-like (InterPro-IPR004263); BEST Arabidopsis thaliana protein match is- MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups (TAIR-AT2G20370.1); Has 305 Blast hits to 304 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 286; Viruses - 0; Other Eukaryotes - 11 (source- NCBI B [...] (521 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	LCR75	LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75); Encodes a member of a family of small,secreted, [...] (82 aa)	•		0.819
	AT4G14050	pentatricopeptide (PPR) repeat-containing protein; pentatricopeptide (PPR) repeat-containing pr [...] (612 aa)	•		0.788
	AtCXE5	AtCXE5 (Arabidopsis thaliana carboxyesterase 5); carboxylesterase; Encodes a protein with carbo [...] (319 aa)	•		0.679
	AT3G14067	subtilase family protein; subtilase family protein; FUNCTIONS IN- identical protein binding, se [...] (777 aa)	•		0.623
	PBF1	PBF1; peptidase/ threonine-type endopeptidase; Encodes 20S proteasome beta subunit PBF1 (PBF1). [...] (223 aa)	•		0.599
	AT3G26430	GDSL-motif lipase/hydrolase family protein; GDSL-motif lipase/hydrolase family protein; FUNCTIO [...] (380 aa)	•		0.561
	AT5G37000	exostosin family protein; exostosin family protein; FUNCTIONS IN- catalytic activity; INVOLVED [...] (547 aa)	•	•	0.444
	AT5G57500	transferase, transferring glycosyl groups; transferase, transferring glycosyl groups; FUNCTIONS [...] (318 aa)	•		0.440
	AT4G31350	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (376 aa)	•		0.440
	AT5G36810	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (62 aa)	•		0.439

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		518
pfam03016		292	pfam03016, Exostosin, Exostosin family	4e-67

>gnl\|CDD\|217320 pfam03016, Exostosin, Exostosin family	Back alignment and domain information

 Score =  218 bits (556), Expect = 4e-67
 Identities = 108/362 (29%), Positives = 153/362 (42%), Gaps = 84/362 (23%)

Query: 91  SCLGRYIYIHQLPGRFNQDLLKNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNE 150
           SC G  +Y++ LP RFN  LL++                                 L   
Sbjct: 1   SCKGLKVYVYDLPRRFN--LLEDV--------------------------------LPET 26

Query: 151 SWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGGVSTLLRDSS 210
           SW+LT+Q+  E I H  + N RC T D   A   +VPFY  L +G         + RD  
Sbjct: 27  SWYLTHQYAAESILHKSILNSRCRTLDPDEADLFFVPFYTSLSVGTNA------VERDLL 80

Query: 211 GLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLS 270
             +LV+WL   P W +  GRDH +V                  GS F  LP   N ++L+
Sbjct: 81  PSELVEWLESLPYWNRSGGRDHIIVNSH------------PFGGSAFDRLPALNNNTILA 128

Query: 271 I------ESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAPRPDLK- 323
           +          +   F +P P  FHP+   ++        KRK   L  FAG PRP  K 
Sbjct: 129 VLAGGGFSEDQFRPGFDVPLPAYFHPNSVDDLESDGMPPSKRK--TLLFFAGGPRPAGKG 186

Query: 324 ---GSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRK 380
               +IR  +I++C  S           G  +C NP N M++ ++S FCL PPGD+ T  
Sbjct: 187 ALANAIRDLLIEECKNSPDFQC-----EGNQSCGNPENYMELLRSSRFCLVPPGDTPTSP 241

Query: 381 SVFDTILAGCIPVFFHPGTAYAQYLWHLPK----NYSSYSLYIPVRDVKDWRVNVNETLV 436
            +FD + AGCIPV    G       W LP     ++S +S+ +P  D+     ++ E L 
Sbjct: 242 RLFDALRAGCIPVIISDG-------WELPFEDVIDWSKFSVRVPENDI----PSLPEILR 290

Query: 437 GI 438
            I
Sbjct: 291 AI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		518
KOG1021		464	consensus Acetylglucosaminyltransferase EXT1/exost	100.0
PF03016		302	Exostosin: Exostosin family; InterPro: IPR004263 H	100.0
KOG2264		907	consensus Exostosin EXT1L [Signal transduction mec	99.9
KOG1022		691	consensus Acetylglucosaminyltransferase EXT2/exost	99.22
PF00852		349	Glyco_transf_10: Glycosyltransferase family 10 (fu	95.18
cd03814		364	GT1_like_2 This family is most closely related to	95.05
cd03794		394	GT1_wbuB_like This family is most closely related	94.31
cd03822		366	GT1_ecORF704_like This family is most closely rela	93.74
cd03808		359	GT1_cap1E_like This family is most closely related	92.9
PLN02871		465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	92.59
cd03807		365	GT1_WbnK_like This family is most closely related	91.69
cd03820		348	GT1_amsD_like This family is most closely related	91.62
cd04962		371	GT1_like_5 This family is most closely related to	91.55
cd03801		374	GT1_YqgM_like This family is most closely related	91.4
PF00534		172	Glycos_transf_1: Glycosyl transferases group 1; In	91.16
cd03809		365	GT1_mtfB_like This family is most closely related	90.75
cd03800		398	GT1_Sucrose_synthase This family is most closely r	90.7
cd03818		396	GT1_ExpC_like This family is most closely related	90.61
cd03823		359	GT1_ExpE7_like This family is most closely related	90.16
cd03806		419	GT1_ALG11_like This family is most closely related	89.71
PRK09814		333	beta-1,6-galactofuranosyltransferase; Provisional	89.62
cd03819		355	GT1_WavL_like This family is most closely related	89.62
cd05844		367	GT1_like_7 Glycosyltransferases catalyze the trans	89.54
cd04951		360	GT1_WbdM_like This family is most closely related	89.4
TIGR03449		405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	89.22
TIGR03088		374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	89.05
cd03821		375	GT1_Bme6_like This family is most closely related	88.89
PRK15427		406	colanic acid biosynthesis glycosyltransferase WcaL	87.18
cd03798		377	GT1_wlbH_like This family is most closely related	87.15
PRK00654		466	glgA glycogen synthase; Provisional	84.38
PRK15484		380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	83.29
cd03817		374	GT1_UGDG_like This family is most closely related	83.22
PRK14098		489	glycogen synthase; Provisional	82.86
TIGR02095		473	glgA glycogen/starch synthases, ADP-glucose type.	82.64
PF12575		72	DUF3753: Protein of unknown function (DUF3753); In	82.49
cd03804		351	GT1_wbaZ_like This family is most closely related	82.31
KOG2619		372	consensus Fucosyltransferase [Carbohydrate transpo	81.98
TIGR02149		388	glgA_Coryne glycogen synthase, Corynebacterium fam	80.17

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]	Back alignment and domain information

Probab=100.00  E-value=4.6e-68  Score=571.43  Aligned_cols=383  Identities=36%  Similarity=0.623  Sum_probs=333.5

Q ss_pred             CCCCCcceEEEeCCCccccHHHhhcccCCC-CCCCC-CCCCCccCCCCCCCccccchhh---hhccccccccchhhhhHH
Q 046652           89 IDSCLGRYIYIHQLPGRFNQDLLKNCHLLT-PGTDK-NMCPYLGNFGFGPGINEENQEI---VLLNESWFLTNQFLLEVI  163 (518)
Q Consensus        89 ~~~c~g~~IYvYDLP~~Fn~~ll~~c~~~~-~w~~~-~~C~~~~n~G~g~~~~~~~~~~---~~~~~~W~~t~~y~lE~i  163 (518)
                      ...|.+..||||+||+.||.++++.|.... .|..+ .+|.+..|.++|+...  +..+   ....++|+.|+||++|.+
T Consensus        67 ~~~~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~w~~~~~~~~E~~  144 (464)
T KOG1021|consen   67 QAICAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYV--YHEGNKPLFHTPSWCLTDQYASEGI  144 (464)
T ss_pred             hhcccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEE--ecCCCCccccCCCcccccchhHHHH
Confidence            345999999999999999999999998764 34332 3899999888887764  3333   355778999999999999


Q ss_pred             HHHhh--ccCccccCCCCCceEEEEeccccccccccccCC---CCccccchHHHHHHHHHhcCccccccCCCCeEEEecc
Q 046652          164 FHNKM--KNYRCLTNDSSIASAIYVPFYAGLDIGRYLFGG---VSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGR  238 (518)
Q Consensus       164 fh~rL--l~s~~rT~DPeeAdlFyVP~y~sl~~~r~~~~~---~~~~~r~~l~~~l~~~L~~~P~WnR~gGrDHf~v~~~  238 (518)
                      ||++|  ..++|||.||++||+||||||+++++.+++..+   .+...++.++.+++.|++++|||||++|+|||||++|
T Consensus       145 ~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~  224 (464)
T KOG1021|consen  145 FHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACH  224 (464)
T ss_pred             HHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCC
Confidence            99999  578999999999999999999999988875542   1223456778889999999999999999999999999


Q ss_pred             cccccccCCCCCCCcccccccCcccccceeeeeeccCCCCCeeeCCCCCCCCCCCchhhhhcccccccCCceEEEeccCC
Q 046652          239 IAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFSFAGAP  318 (518)
Q Consensus       239 ~~wdf~r~~~~~~~wG~~~~~~p~~~N~t~l~~e~~~~~~DvviPy~t~~hP~~~~~~~~w~~~~~~~~R~~L~~FaG~~  318 (518)
                      ..|++.+.    .+|+.+...++++.|.+.+..+..+|.+||+|||++.+||....+. .|+..+...+|++|++|+|++
T Consensus       225 ~~~~~~~~----~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~  299 (464)
T KOG1021|consen  225 DWGDFRRR----SDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAP  299 (464)
T ss_pred             cchheeec----cchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEeccc
Confidence            88887664    5699998899999998888888888889999999999999888777 888888889999999999975


Q ss_pred             CCCCChhHHHHHHHHHhhCCCcEEEeecCCCCCcCCCCcccccccccceEEEccCCCCCCCchHHHHHHhCceeEEecCC
Q 046652          319 RPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPG  398 (518)
Q Consensus       319 ~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~g~~~c~~~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~aGCIPViisd~  398 (518)
                         .++.||+.|+++|++.++.+.+++|..|..+|.++..|++.|++|+|||||+||+++|+|+||||.+|||||||+|+
T Consensus       300 ---~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~  376 (464)
T KOG1021|consen  300 ---AGGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG  376 (464)
T ss_pred             ---cCCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC
Confidence               68999999999999966778889999988889999999999999999999999999999999999999999999998


Q ss_pred             CccccceeecCCCCCeeEEEEeCCccccccccHHHHHccCCHHHHHHHHHHHHh-hcceeEEeCCCCCcCCcccHHHHHH
Q 046652          399 TAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVR-LIPSVIYADPRSKLETLEDAFDLAV  477 (518)
Q Consensus       399 ~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~~Is~e~i~~Mr~~l~~-v~~~f~Y~~p~~~~~~~~DAfd~il  477 (518)
                         .|++|+.|.||++|||+|++++++++   |.++|.+|+.+++.+||+++++ +.+||.+..+ + ....+|||++++
T Consensus       377 ---~~lpf~~~~d~~~fSV~v~~~~v~~~---~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~-~-~~~~~da~~~~~  448 (464)
T KOG1021|consen  377 ---IQLPFGDVLDWTEFSVFVPEKDVPEL---IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPP-G-PPKRGDAFHMIL  448 (464)
T ss_pred             ---cccCcCCCccceEEEEEEEHHHhhhH---HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCC-C-CCCcchhHHHHH
Confidence               46677777899999999999999983   5999999999999999999995 8888888873 1 123499999999


Q ss_pred             HHHHHHHHHHHH
Q 046652          478 KGILERIEQVRS  489 (518)
Q Consensus       478 ~~l~~R~~~~r~  489 (518)
                      ++|+.|+..++.
T Consensus       449 ~~v~~r~~~~~~  460 (464)
T KOG1021|consen  449 HSLWRRLHKLRS  460 (464)
T ss_pred             hhhhhccccccc
Confidence            999999988763

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []	Back alignment and domain information

>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]	Back alignment and domain information

>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]	Back alignment and domain information

>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	Back alignment and domain information

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional	Back alignment and domain information

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli	Back alignment and domain information

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase	Back alignment and domain information

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional	Back alignment and domain information

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK00654 glgA glycogen synthase; Provisional	Back alignment and domain information

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional	Back alignment and domain information

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK14098 glycogen synthase; Provisional	Back alignment and domain information

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type	Back alignment and domain information

>PF12575 DUF3753: Protein of unknown function (DUF3753); InterPro: IPR009175 This group represents an uncharacterised conserved protein belonging to poxvirus family I2	Back alignment and domain information

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]	Back alignment and domain information

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		518
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 61.8 bits (149), Expect = 3e-10
 Identities = 43/315 (13%), Positives = 95/315 (30%), Gaps = 60/315 (19%)

Query: 212 LDLVKWLAEKPEWKKLWGRDHFLVAG-RIAWDFRRQTDN----------ESDWG---SKF 257
            D+ K +  K E   +      +    R+ W    + +             ++    S  
Sbjct: 39  QDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98

Query: 258 RFLPESKNMSMLSIESSS---WN-NDFAIPYPTCFHPSKESEIIGWQDRMRKRKRQYLFS 313
           +      +M            +N N     Y          ++      +R  K   +  
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS-RLQPYLKLRQALLELRPAKNVLIDG 157

Query: 314 FAGAPRPDLKGSIRGKIIDQCLASGSLCR---LIDCNYGA------TNCDNPVNVMKMFQ 364
             G+          GK     +A   +C    +              NC++P  V++M Q
Sbjct: 158 VLGS----------GK---TWVAL-DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 365 NSVFCLQPPGDSYTRKSVFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDV 424
                 Q   +  +R           I +  H   A  + L    K Y +  L + + +V
Sbjct: 204 K--LLYQIDPNWTSRSDHSSN-----IKLRIHSIQAELRRLLKS-KPYEN-CLLV-LLNV 253

Query: 425 KDWRV----NVN-ETLVGISEDRILALREQVVRLIPSVIYADPRSKLETLEDAFDLAVKG 479
           ++ +     N++ + L+  +  + +   + +     + I  D  S   T ++   L +K 
Sbjct: 254 QNAKAWNAFNLSCKILL-TTRFKQVT--DFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 480 ILERIEQVRSSIRQG 494
           +  R + +   +   
Sbjct: 311 LDCRPQDLPREVLTT 325

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		518
3qhp_A		166	Type 1 capsular polysaccharide biosynthesis prote	96.43
2bfw_A		200	GLGA glycogen synthase; glycosyltransferase family	94.75
2nzw_A		371	Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H	92.31
2gek_A		406	Phosphatidylinositol mannosyltransferase (PIMA); G	91.73
3okp_A		394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	90.71
3c48_A		438	Predicted glycosyltransferases; retaining glycosyl	89.77
2jjm_A		394	Glycosyl transferase, group 1 family protein; anth	88.2
2iw1_A		374	Lipopolysaccharide core biosynthesis protein RFAG;	87.93
1f0k_A		364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	87.3
2f9f_A		177	First mannosyl transferase (WBAZ-1); alpha-beta pr	87.21
3fro_A		439	GLGA glycogen synthase; glycosyltransferase family	86.41
3rhz_A		339	GTF3, nucleotide sugar synthetase-like protein; gl	82.62
1rzu_A		485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	81.27
3oy2_A		413	Glycosyltransferase B736L; rossmann fold, GDP-mann	81.19

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}	Back alignment and structure

Probab=96.43  E-value=0.0053  Score=54.45  Aligned_cols=130  Identities=12%  Similarity=0.175  Sum_probs=75.9

Q ss_pred             ceEEEeccCCCCCCChhHHHHHHHHHhhCCCcEEEeecCCCCCcCCCCcccccccccceEEEccCCCCCCCchHHHHHHh
Q 046652          309 QYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILA  388 (518)
Q Consensus       309 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~g~~~c~~~~~y~~~m~~S~FCL~P~Gds~~s~Rl~DAi~a  388 (518)
                      ++-+.+.|.      +..++.+.+..++....+.+     |  .. ...+..+.|+.+..++.|.-.......+.|||.+
T Consensus        32 ~~~l~i~G~------g~~~~~~~~~~~~~~~~v~~-----g--~~-~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~   97 (166)
T 3qhp_A           32 DIVLLLKGK------GPDEKKIKLLAQKLGVKAEF-----G--FV-NSNELLEILKTCTLYVHAANVESEAIACLEAISV   97 (166)
T ss_dssp             GEEEEEECC------STTHHHHHHHHHHHTCEEEC-----C--CC-CHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT
T ss_pred             CeEEEEEeC------CccHHHHHHHHHHcCCeEEE-----e--ec-CHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc
Confidence            566777884      22345555554443222211     2  11 1356788999999999987544455789999999


Q ss_pred             CceeEEecCC-CccccceeecCCCCCeeEEEEeCCccccccccHHHHHccCCHHHHHHHHHHHHhhcceeEEeC
Q 046652          389 GCIPVFFHPG-TAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLVGISEDRILALREQVVRLIPSVIYAD  461 (518)
Q Consensus       389 GCIPViisd~-~ay~qy~~~LPfDw~~fSV~Ipe~dv~~~~~~l~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~~  461 (518)
                      ||||||..+. ....    ++--+ ...  .++..+..+-.-.|.+++.  .++...+|.++.++...+|-|..
T Consensus        98 G~vPvi~~~~~~~~~----~~~~~-~~~--~~~~~~~~~l~~~i~~l~~--~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A           98 GIVPVIANSPLSATR----QFALD-ERS--LFEPNNAKDLSAKIDWWLE--NKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             TCCEEEECCTTCGGG----GGCSS-GGG--EECTTCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHC---
T ss_pred             CCCcEEeeCCCCchh----hhccC-Cce--EEcCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHCChhh
Confidence            9999999443 2111    11112 222  4555555541112334444  57888899998887667776654

PyMOL of 3qhp

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8	Back alignment and structure

>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*	Back alignment and structure

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*	Back alignment and structure

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*	Back alignment and structure

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*	Back alignment and structure

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*	Back alignment and structure

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*	Back alignment and structure

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*	Back alignment and structure

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8	Back alignment and structure

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*	Back alignment and structure

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*	Back alignment and structure

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A	Back alignment and structure

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		518
d2nzwa1		349	Alpha1,3-fucosyltransferase FucT {Helicobacter pyl	96.73
d2bisa1		437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	83.77
d2iw1a1		370	Lipopolysaccharide core biosynthesis protein RfaG	81.14

>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.73  E-value=0.0029  Score=62.70  Aligned_cols=124  Identities=15%  Similarity=0.187  Sum_probs=76.5

Q ss_pred             ccCCceEEEeccCCCCCCChhHHHHHHHHHhhCCCcEEEeecCCCCCcCCCCcccccccccceEEEccC---CCCCCCch
Q 046652          305 KRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPP---GDSYTRKS  381 (518)
Q Consensus       305 ~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~~~~~c~~g~~~c~~~~~y~~~m~~S~FCL~P~---Gds~~s~R  381 (518)
                      ..+|+.+.+|.-+   +.+...|..+++++.+-..+-..-.|...  .+....+-.+.|++-+|+|++.   ..+..+-.
T Consensus       176 ~~~K~kFcs~v~S---n~~~~~R~~~~~~L~k~~~Vd~~G~~~nn--~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEK  250 (349)
T d2nzwa1         176 DPLKRGFASFVAS---NPNAPIRNAFYDALNSIEPVTGGGSVRNT--LGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEK  250 (349)
T ss_dssp             CTTSSEEEEECCS---CCCCHHHHHHHHHHTTTSCCEECSSTTCC--SSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTH
T ss_pred             ccccCceEEEEEc---CCCCchHHHHHHHHhccCeecccCccccC--CCCchhhHHHHHhCCCeEEEECCcCCCCCcchH
Confidence            4556666766643   23457999999999887443211112211  1122234567899999999975   34667889


Q ss_pred             HHHHHHhCceeEEecCCCccccceeecCCCCCeeEEEEeCCc---cccccccHHHHHccCC--HHHHHHH
Q 046652          382 VFDTILAGCIPVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRD---VKDWRVNVNETLVGIS--EDRILAL  446 (518)
Q Consensus       382 l~DAi~aGCIPViisd~~ay~qy~~~LPfDw~~fSV~Ipe~d---v~~~~~~l~~iL~~Is--~e~i~~M  446 (518)
                      ++||+++|||||..++..      +.--|+-..|   |...|   +.+    +.+.|..|.  ++.+.+|
T Consensus       251 i~da~~~g~iPIy~G~~~------i~~~f~~~sf---I~~~df~s~~e----l~~~i~~l~~n~~~Y~~~  307 (349)
T d2nzwa1         251 IIDAYFSHTIPIYWGSPS------VAKDFNPKSF---VNVHDFKNFDE----AIDYIKYLHTHKNAYLDM  307 (349)
T ss_dssp             HHHHHHTTCEEEEESCTT------GGGTSCGGGS---EEGGGSSSHHH----HHHHHHHHHTCHHHHHHH
T ss_pred             HHHHHhCCeEEEEECCCc------HHHcCCCccE---EEhhhCCCHHH----HHHHHHHHhcCHHHHHHH
Confidence            999999999999999763      2222333444   33333   333    666666664  4555555

PyMOL of d2nzwa1

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure