Citrus Sinensis ID: 046735


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------
MALQAETDSNYDRESELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVVNLNSGNSSQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIPRA
cccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHccccc
ccccccccccccHHHHHHHHHHcHcccHcHHHccccccccEEEccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHccccccc
malqaetdsnydreselkafddtkaGVKGLVDARVAKVPRIFECEQSVvnlnsgnssqlrvptidpegihkdpntRTEIINKVKNASEEWGFFQVishgiplsvlndikdgiripra
malqaetdsnydreselkafddtkagvKGLVDARVAKVPRIFECEQsvvnlnsgnssqlrvptidpegihkdpntrTEIINKVKNASEEWGFFQVIshgiplsvlndikdgiripra
MALQAETDSNYDRESELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVVNLNSGNSSQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIPRA
************************AGVKGLVDARVAKVPRIFECEQSVVNL**************************EIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGI*****
***************ELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVV*********LRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIP**
*************ESELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVVNLNSGNSSQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIPRA
**********YDRESELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVVNLNSGNSSQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIP**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALQAETDSNYDRESELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVVNLNSGNSSQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIRIPRA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query117 2.2.26 [Sep-21-2011]
Q9LTH8 364 1-aminocyclopropane-1-car yes no 0.940 0.302 0.490 3e-25
Q9LTH7 366 1-aminocyclopropane-1-car no no 0.880 0.281 0.523 2e-24
P10967 363 1-aminocyclopropane-1-car N/A no 0.811 0.261 0.495 8e-24
Q9SKK4 359 Probable 2-oxoacid depend no no 0.888 0.289 0.509 1e-22
P93824 360 1-aminocyclopropane-1-car no no 0.854 0.277 0.466 2e-22
Q84MB3 365 1-aminocyclopropane-1-car no no 0.871 0.279 0.475 8e-22
Q9LSW7 365 1-aminocyclopropane-1-car no no 0.931 0.298 0.482 3e-20
O04847 401 Deacetoxyvindoline 4-hydr N/A no 0.965 0.281 0.408 6e-19
Q8H1S4 369 1-aminocyclopropane-1-car no no 0.905 0.287 0.459 2e-18
Q9C5K7 369 1-aminocyclopropane-1-car no no 0.888 0.281 0.458 4e-18
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function desciption
 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 74/110 (67%)

Query: 4   QAETDSNYDRESELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVVNLNSGNSSQLRVPT 63
            A+    +DR  E KAFD+TK GVKGL+DA++ ++PRIF   Q  +     + S L +PT
Sbjct: 1   MAKNSVEFDRYIERKAFDNTKEGVKGLIDAKITEIPRIFHVPQDTLPDKKRSVSDLEIPT 60

Query: 64  IDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIR 113
           ID   ++ D  +R  I+ KVK A E WGFFQVI+HG+PL+VL +IKDG+R
Sbjct: 61  IDFASVNVDTPSREAIVEKVKYAVENWGFFQVINHGVPLNVLEEIKDGVR 110





Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKK4|GSL_ARATH Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query117
356527372 690 PREDICTED: 1-aminocyclopropane-1-carboxy 0.948 0.160 0.522 9e-28
357451771 381 1-aminocyclopropane-1-carboxylate oxidas 0.863 0.265 0.582 1e-27
255576828 364 Desacetoxyvindoline 4-hydroxylase, putat 0.897 0.288 0.566 2e-27
37906568133 putative desacetoxyvindoline 4-hydroxyla 0.897 0.789 0.579 9e-27
225433035 373 PREDICTED: 1-aminocyclopropane-1-carboxy 0.948 0.297 0.548 1e-26
147822811 373 hypothetical protein VITISV_042886 [Viti 0.948 0.297 0.548 1e-26
147845654 373 hypothetical protein VITISV_017626 [Viti 0.897 0.281 0.579 1e-26
359477763 684 PREDICTED: 1-aminocyclopropane-1-carboxy 0.897 0.153 0.579 1e-26
357451773 391 1-aminocyclopropane-1-carboxylate oxidas 0.863 0.258 0.572 2e-26
356527374 373 PREDICTED: 1-aminocyclopropane-1-carboxy 0.897 0.281 0.518 3e-26
>gi|356527372|ref|XP_003532285.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 12-like [Glycine max] Back     alignment and taxonomy information
 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 59/113 (52%), Positives = 86/113 (76%), Gaps = 2/113 (1%)

Query: 3   LQAETDSNYDRESELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVVNL--NSGNSSQLR 60
           L+   DS YDR++E+KAFDD+KAGVKGLV++ V K+PR+F   +  +++   SG  S+L 
Sbjct: 9   LEKNMDSTYDRKAEVKAFDDSKAGVKGLVESGVTKIPRMFHSGKLDLDIIETSGGDSKLI 68

Query: 61  VPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIR 113
           +P ID + IH +P  R+E+I K+++A  EWGFFQVI+HGIP+SVL+++ DGIR
Sbjct: 69  IPIIDFKDIHSNPALRSEVIGKIRSACHEWGFFQVINHGIPISVLDEMIDGIR 121




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451771|ref|XP_003596162.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula] gi|355485210|gb|AES66413.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255576828|ref|XP_002529300.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] gi|223531224|gb|EEF33069.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|37906568|gb|AAP49698.1| putative desacetoxyvindoline 4-hydroxylase [Vitis vinifera] Back     alignment and taxonomy information
>gi|225433035|ref|XP_002284663.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147822811|emb|CAN66006.1| hypothetical protein VITISV_042886 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147845654|emb|CAN80594.1| hypothetical protein VITISV_017626 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477763|ref|XP_002284676.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357451773|ref|XP_003596163.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula] gi|355485211|gb|AES66414.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356527374|ref|XP_003532286.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query117
TAIR|locus:2148403 364 AT5G59530 [Arabidopsis thalian 0.931 0.299 0.495 4.6e-25
TAIR|locus:2148303 366 AT5G59540 [Arabidopsis thalian 0.948 0.303 0.486 4.2e-24
TAIR|locus:2052781 358 AT2G30830 [Arabidopsis thalian 0.880 0.287 0.561 5.3e-24
TAIR|locus:2018349 360 AT1G04350 [Arabidopsis thalian 0.888 0.288 0.463 2.6e-22
TAIR|locus:2040045 359 AT2G25450 [Arabidopsis thalian 0.888 0.289 0.509 5.5e-22
TAIR|locus:2009130 365 AT1G06620 [Arabidopsis thalian 0.871 0.279 0.475 1.9e-21
TAIR|locus:2824199 366 AT1G06645 [Arabidopsis thalian 0.888 0.284 0.467 6.3e-21
TAIR|locus:2176456 365 AT5G43440 [Arabidopsis thalian 0.914 0.293 0.491 1.4e-20
TAIR|locus:2009210 369 AT1G06640 [Arabidopsis thalian 0.888 0.281 0.458 1.2e-18
TAIR|locus:2052796 362 AT2G30840 [Arabidopsis thalian 0.888 0.287 0.464 1.4e-18
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 54/109 (49%), Positives = 74/109 (67%)

Query:     5 AETDSNYDRESELKAFDDTKAGVKGLVDARVAKVPRIFECEQSVVNLNSGNSSQLRVPTI 64
             A+    +DR  E KAFD+TK GVKGL+DA++ ++PRIF   Q  +     + S L +PTI
Sbjct:     2 AKNSVEFDRYIERKAFDNTKEGVKGLIDAKITEIPRIFHVPQDTLPDKKRSVSDLEIPTI 61

Query:    65 DPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIR 113
             D   ++ D  +R  I+ KVK A E WGFFQVI+HG+PL+VL +IKDG+R
Sbjct:    62 DFASVNVDTPSREAIVEKVKYAVENWGFFQVINHGVPLNVLEEIKDGVR 110




GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0000041 "transition metal ion transport" evidence=RCA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0010043 "response to zinc ion" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052781 AT2G30830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018349 AT1G04350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040045 AT2G25450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824199 AT1G06645 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176456 AT5G43440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009210 AT1G06640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query117
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 8e-14
PLN02904 357 PLN02904, PLN02904, oxidoreductase 6e-11
PLN02393 362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 5e-09
PLN02758 361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 7e-09
PLN02254 358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 7e-09
PLN02365 300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 9e-07
PLN02750 345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-06
PLN02947 374 PLN02947, PLN02947, oxidoreductase 1e-06
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-06
PLN02704 335 PLN02704, PLN02704, flavonol synthase 2e-06
PLN02515 358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 3e-06
PLN02276 361 PLN02276, PLN02276, gibberellin 20-oxidase 5e-06
PLN02912 348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-05
PLN03178 360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-05
PLN02485 329 PLN02485, PLN02485, oxidoreductase 2e-05
COG3491 322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-05
PLN02216 357 PLN02216, PLN02216, protein SRG1 4e-05
PLN02403 303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-04
PLN02997 325 PLN02997, PLN02997, flavonol synthase 1e-04
PLN02984 341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-04
PLN02299 321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 0.001
PLN02639 337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 0.001
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
 Score = 62.3 bits (152), Expect = 8e-14
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 61  VPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIR 113
           +P ID   +  DP  R  +  ++  A  EWGFFQ+++HGIP  +++ + +  R
Sbjct: 1   IPVID---LSGDPEDRAAVAAELGEACREWGFFQLVNHGIPEELIDRLFEAAR 50


This is the highly conserved N-terminal region of proteins with 2-oxoglutarate/Fe(II)-dependent dioxygenase activity. Length = 113

>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 117
PLN02904 357 oxidoreductase 99.86
PLN02947 374 oxidoreductase 99.84
PLN02758 361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.82
PLN03176120 flavanone-3-hydroxylase; Provisional 99.81
PLN02393 362 leucoanthocyanidin dioxygenase like protein 99.81
PLN03178 360 leucoanthocyanidin dioxygenase; Provisional 99.8
PLN02216 357 protein SRG1 99.8
PLN02912 348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.76
PLN02276 361 gibberellin 20-oxidase 99.74
PLN02515 358 naringenin,2-oxoglutarate 3-dioxygenase 99.74
PLN00417 348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.74
PLN02639 337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.74
PLN02704 335 flavonol synthase 99.74
PLN02750 345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.69
PLN02254 358 gibberellin 3-beta-dioxygenase 99.68
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.65
KOG0143 322 consensus Iron/ascorbate family oxidoreductases [S 99.63
PLN02403 303 aminocyclopropanecarboxylate oxidase 99.56
PLN02299 321 1-aminocyclopropane-1-carboxylate oxidase 99.54
PTZ00273 320 oxidase reductase; Provisional 99.54
PLN02485 329 oxidoreductase 99.51
PLN02997 325 flavonol synthase 99.49
PLN02156 335 gibberellin 2-beta-dioxygenase 99.47
COG3491 322 PcbC Isopenicillin N synthase and related dioxygen 99.42
PLN02365 300 2-oxoglutarate-dependent dioxygenase 99.42
PLN03002 332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.41
PLN02984 341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 99.4
>PLN02904 oxidoreductase Back     alignment and domain information
Probab=99.86  E-value=5.3e-22  Score=158.08  Aligned_cols=96  Identities=32%  Similarity=0.476  Sum_probs=81.7

Q ss_pred             hcccccccHHHHHhcccCCCCCceecCCCcccCCCC----CCCCCCcCccCCCCCCCCCchHHHHHHHHHHHHHhcceEE
Q 046735           19 AFDDTKAGVKGLVDARVAKVPRIFECEQSVVNLNSG----NSSQLRVPTIDPEGIHKDPNTRTEIINKVKNASEEWGFFQ   94 (117)
Q Consensus        19 ~~~~~~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~----~~~~~~iPvIDls~~~~~~~~r~~~~~~l~~A~~~~GFf~   94 (117)
                      -++++++||++|+++|+.+||++|++|++  ++|..    ......||+|||+.+. ++..|.+++++|++||++|||||
T Consensus         8 ~~~~~~~~~~~l~~~~~~~vp~~~~~~~~--~~p~~~~~~~~~~~~iPvIDls~~~-~~~~r~~~~~~l~~Ac~~~GFf~   84 (357)
T PLN02904          8 VLDDSFTSAMTLTNSGVPHVPDRYVLPPS--QRPMLGSSIGTSTITLPVIDLSLLH-DPLLRSCVIHEIEMACKGFGFFQ   84 (357)
T ss_pred             hhhccccchHHHHhcCCCCCCHHhCCCch--hcccccccccccCCCCCEEECcccC-CchhHHHHHHHHHHHHHHCceEE
Confidence            36788999999999999999999999988  66632    1123579999999886 34567889999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHhhhccCC
Q 046735           95 VISHGIPLSVLNDIKDGIRIPRA  117 (117)
Q Consensus        95 v~nHGI~~~li~~~~~~~~~~~~  117 (117)
                      |+||||+.+++++++++++.-|+
T Consensus        85 v~nHGI~~~li~~~~~~~~~FF~  107 (357)
T PLN02904         85 VINHGIPSSVVKDALDAATRFFD  107 (357)
T ss_pred             EEeCCCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999987553



>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query117
1gp5_A 356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-04
2brt_A 355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-04
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure

Iteration: 1

Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 60 RVPTIDPEGIHKD-PNTRTEIINKVKNASEEWGFFQVISHGIPLSVLNDIK 109 +VPTID + I D R I ++K AS +WG +I+HGIP ++ +K Sbjct: 46 QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVK 96
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query117
1gp6_A 356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 3e-23
1w9y_A 319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-16
1odm_A 331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-11
3oox_A 312 Putative 2OG-Fe(II) oxygenase family protein; stru 4e-08
3on7_A 280 Oxidoreductase, iron/ascorbate family; structural 2e-07
1dcs_A 311 Deacetoxycephalosporin C synthase; ferrous oxygena 5e-07
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score = 90.8 bits (226), Expect = 3e-23
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 27  VKGLVDARVAKVPRIF---ECEQ---SVVNLNSGNSSQLRVPTIDPEGIHK-DPNTRTEI 79
           V+ L  + +  +P+ +   + E    + V L        +VPTID + I   D   R   
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 80  INKVKNASEEWGFFQVISHGIPLSVLNDIKDGIR 113
           I ++K AS +WG   +I+HGIP  ++  +K    
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGE 100


>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query117
1gp6_A 356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 99.84
1w9y_A 319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 99.53
3on7_A 280 Oxidoreductase, iron/ascorbate family; structural 99.51
3oox_A 312 Putative 2OG-Fe(II) oxygenase family protein; stru 99.51
1odm_A 331 Isopenicillin N synthase; antibiotic biosynthesis, 99.42
1dcs_A 311 Deacetoxycephalosporin C synthase; ferrous oxygena 99.37
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=99.84  E-value=2.4e-21  Score=152.69  Aligned_cols=91  Identities=29%  Similarity=0.483  Sum_probs=76.2

Q ss_pred             cccHHHHHhcccCCCCCceecCCCcccCCCCCC----C----CCCcCccCCCCCCC-CCchHHHHHHHHHHHHHhcceEE
Q 046735           24 KAGVKGLVDARVAKVPRIFECEQSVVNLNSGNS----S----QLRVPTIDPEGIHK-DPNTRTEIINKVKNASEEWGFFQ   94 (117)
Q Consensus        24 ~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~~~----~----~~~iPvIDls~~~~-~~~~r~~~~~~l~~A~~~~GFf~   94 (117)
                      ..+||+|+++++.+||++|++|++  +++....    .    ...||+|||+.+.+ ++..|.+++++|++||++|||||
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~--~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~   81 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKE--ELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH   81 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHH--HHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCch--hcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence            458999999999999999999977  5553111    1    23699999999863 45568889999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHhhhccC
Q 046735           95 VISHGIPLSVLNDIKDGIRIPR  116 (117)
Q Consensus        95 v~nHGI~~~li~~~~~~~~~~~  116 (117)
                      |+||||+.++++++++.++.-|
T Consensus        82 v~nHGi~~~l~~~~~~~~~~FF  103 (356)
T 1gp6_A           82 LINHGIPADLMERVKKAGEEFF  103 (356)
T ss_dssp             EESCSCCHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999987644



>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 117
d1gp6a_ 349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-17
d1odma_ 329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 4e-13
d1w9ya1 307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-12
d1dcsa_ 311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-09
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
 Score = 74.6 bits (182), Expect = 1e-17
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 25  AGVKGLVDARVAKVPRIF---ECEQ---SVVNLNSGNSSQLRVPTIDPEGIHK-DPNTRT 77
             V+ L  + +  +P+ +   + E    + V L        +VPTID + I   D   R 
Sbjct: 4   ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRE 63

Query: 78  EIINKVKNASEEWGFFQVISHGIPLSVLNDIKDGIR 113
             I ++K AS +WG   +I+HGIP  ++  +K    
Sbjct: 64  NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGE 99


>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query117
d1gp6a_ 349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 99.88
d1w9ya1 307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 99.56
d1odma_ 329 Isopenicillin N synthase {Emericella nidulans [Tax 99.51
d1dcsa_ 311 Deacetoxycephalosporin C synthase {Streptomyces cl 99.34
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.88  E-value=1.3e-23  Score=161.10  Aligned_cols=91  Identities=27%  Similarity=0.473  Sum_probs=78.9

Q ss_pred             cccHHHHHhcccCCCCCceecCCCcccCCCC--------CCCCCCcCccCCCCCC-CCCchHHHHHHHHHHHHHhcceEE
Q 046735           24 KAGVKGLVDARVAKVPRIFECEQSVVNLNSG--------NSSQLRVPTIDPEGIH-KDPNTRTEIINKVKNASEEWGFFQ   94 (117)
Q Consensus        24 ~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~--------~~~~~~iPvIDls~~~-~~~~~r~~~~~~l~~A~~~~GFf~   94 (117)
                      ...||+|+++|+.+||++|+||+.  ++|..        .....+||||||+.+. +++..|.+++++|++||++|||||
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~   80 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKE--ELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH   80 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHH--HHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChh--hcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEE
Confidence            458999999999999999999988  55521        2345689999999987 356678899999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHhhhccC
Q 046735           95 VISHGIPLSVLNDIKDGIRIPR  116 (117)
Q Consensus        95 v~nHGI~~~li~~~~~~~~~~~  116 (117)
                      |+||||+.+++++++++++.-|
T Consensus        81 l~nHGI~~~li~~~~~~~~~FF  102 (349)
T d1gp6a_          81 LINHGIPADLMERVKKAGEEFF  102 (349)
T ss_dssp             EESCSCCHHHHHHHHHHHHHHH
T ss_pred             EEccCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999988654



>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure