Citrus Sinensis ID: 046746
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 561 | 2.2.26 [Sep-21-2011] | |||||||
| Q00624 | 555 | L-ascorbate oxidase homol | N/A | no | 0.937 | 0.947 | 0.659 | 0.0 | |
| P29162 | 554 | L-ascorbate oxidase homol | N/A | no | 0.964 | 0.976 | 0.579 | 0.0 | |
| Q9SU40 | 587 | Monocopper oxidase-like p | no | no | 0.967 | 0.925 | 0.469 | 1e-141 | |
| Q9FHN6 | 592 | Monocopper oxidase-like p | no | no | 0.953 | 0.903 | 0.463 | 1e-138 | |
| Q8VXX5 | 589 | Monocopper oxidase-like p | no | no | 0.973 | 0.926 | 0.471 | 1e-136 | |
| P24792 | 579 | L-ascorbate oxidase OS=Cu | N/A | no | 0.934 | 0.905 | 0.277 | 1e-50 | |
| P37064 | 552 | L-ascorbate oxidase OS=Cu | N/A | no | 0.891 | 0.905 | 0.283 | 7e-50 | |
| P14133 | 587 | L-ascorbate oxidase OS=Cu | N/A | no | 0.937 | 0.896 | 0.276 | 8e-50 | |
| Q40588 | 578 | L-ascorbate oxidase OS=Ni | N/A | no | 0.900 | 0.873 | 0.272 | 6e-48 | |
| Q1PDH6 | 566 | Laccase-16 OS=Arabidopsis | no | no | 0.846 | 0.839 | 0.289 | 8e-40 |
| >sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/535 (65%), Positives = 436/535 (81%), Gaps = 9/535 (1%)
Query: 27 PTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWP 86
P F WNVTYGT SPLG+PQQ ILINGQFPGPNINST+N+N++INVFN LDEPFLLTW
Sbjct: 26 PYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTWN 85
Query: 87 GIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146
GIQH+KN WQDG GT CPI PG NYTY+ Q KDQIGSY Y+P+TG HRAAGG+GGL ++
Sbjct: 86 GIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYGGLRVN 145
Query: 147 SRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYD 206
SR ++PVPY EDD+T+LIGDWYT+SH +L K LD G+ +G+PDG++INGKSG+
Sbjct: 146 SRLLIPVPYAD-PEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVINGKSGK---- 200
Query: 207 SDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLD 266
G G + PLFT+K GK Y+ RICNVGVKTS+NFRIQ H MKLVEMEGSHV+QN+Y+SLD
Sbjct: 201 --GDGSDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLD 258
Query: 267 VHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWD 326
VHVGQCF +VTANQ+PKDYY++AS+RF +TVITTT ++RY KG AS LP PVGW
Sbjct: 259 VHVGQCFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGPVGWA 318
Query: 327 WSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYV 386
WSLNQFRSFRWNLTASAARPNPQGS+HYG I I RTI+L NT V+GK+RFA+NGVS+
Sbjct: 319 WSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHT 378
Query: 387 NSETPLKFAEYYGIPEEVFKYNVISDKPA-DEIENVTLQPNVMDATYKAFMEIVLENRQN 445
ETPLK AEY+GI ++VFKY+ I+D P ++I+N+ ++PNV++ T++ F+E+V EN +
Sbjct: 379 EPETPLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEK 438
Query: 446 TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505
++QSW LDGY+FF+V +EPGTW P+KRK+YNL+DAVSR+T+QV+P CWAAIL++ DN GM
Sbjct: 439 SVQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGM 498
Query: 506 WNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMSKPT-PYS 559
WN+RS ER YLGQQLY SV ++SLRDEYNMP+ +L CG+V N KP PY+
Sbjct: 499 WNVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKNTPKPVNPYA 553
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Probable oxidase that may be involved in pollen tube growth. Brassica napus (taxid: 3708) EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: - |
| >sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/557 (57%), Positives = 425/557 (76%), Gaps = 16/557 (2%)
Query: 6 LMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTT 65
+ LL+C V A P +F WNVTYGTI+PLG+PQQGILINGQFPGP IN T+
Sbjct: 8 FVALLLCLSVG-----VIAEDPYLYFNWNVTYGTIAPLGVPQQGILINGQFPGPRINCTS 62
Query: 66 NDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSY 125
N+N+V+NVFN LDEPFL TW G+QH+KNSWQDG GT CPI PG+N+TY QVKDQIGSY
Sbjct: 63 NNNIVVNVFNNLDEPFLFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKDQIGSY 122
Query: 126 IYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG 185
Y P+T HRAAGG+G L +HSR+++PVP++ D++ + +GDWY + H L K LD G
Sbjct: 123 SYFPTTALHRAAGGYGALNVHSRALIPVPFDN-PADEYNVFVGDWYNKGHKTLKKILDGG 181
Query: 186 KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGH 245
+ +G+PDG++INGKS ++ + K EPLFTM+AGK Y+YR CN+G+++S+N R QGH
Sbjct: 182 RTIGRPDGIIINGKSAKV---GEAK---EPLFTMEAGKTYRYRFCNLGMRSSVNIRFQGH 235
Query: 246 TMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIV 305
MKLVE+EGSH VQN Y+SLD+HVGQC +VLVTA+Q+PKDYYL+ S+RF + +++ AI+
Sbjct: 236 PMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPKDYYLVVSSRFLKQALSSVAII 295
Query: 306 RYSDSKGLASPDLPKAP----VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
RY++ KG ASP+LP P G WS+NQFRSFRWNLTASAARPNPQGS+HYG I I R
Sbjct: 296 RYANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITR 355
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENV 421
TI++ N+ V GK+R+ +NG+S+ N ETPLK EY+G + FKY++++D+ + +
Sbjct: 356 TIKIFNSMSQVGGKLRYGLNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKL 415
Query: 422 TLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV 481
T+ NV +ATY+ F+EI+ EN + T++++ LDGY+FFAV +EPG W+P+KRK+YNL+D +
Sbjct: 416 TIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGL 475
Query: 482 SRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPD 541
SR IQV+PN WAAI+++ DNAGMWNLRS +WE+ YLG+QLY SV RSLRDEYN+PD
Sbjct: 476 SRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPD 535
Query: 542 NALLCGIVANMSKPTPY 558
N LCGIV +S P PY
Sbjct: 536 NHPLCGIVKGLSMPAPY 552
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Probable oxidoreductase that may be involved in pollen tube growth. Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: - |
| >sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/565 (46%), Positives = 359/565 (63%), Gaps = 22/565 (3%)
Query: 7 MMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTN 66
++LL+ F+ + A P F+ + V+Y T SPLG+PQQ I ING+FPGP IN TTN
Sbjct: 6 ILLLVFFVNIS---FCFAADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTTN 62
Query: 67 DNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYI 126
+NLV+NV NKLDE LL W GIQ ++ SWQDGVLGTNCPIPP N+TY QVKDQIGS+
Sbjct: 63 ENLVVNVRNKLDEGLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFF 122
Query: 127 YHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGK 186
Y PS F RA+GGFG ++ R+++PVP++ + D T+ IGDWY R+H L K LD GK
Sbjct: 123 YFPSLHFQRASGGFGSFVVNPRAIIPVPFST-PDGDITVTIGDWYIRNHTALRKALDDGK 181
Query: 187 LLGKPDGVLINGKSGRLDYDSD--GKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQG 244
LG PDGVLINGK G Y+ G + T+ GK Y+ R+ NVG+ TSLNFRIQG
Sbjct: 182 DLGMPDGVLINGK-GPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQG 240
Query: 245 HTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDP-KDYYLIASTRFTRTVI---- 299
H + L E EGS+ VQ Y SLD+HVGQ ++ LVT +Q+ DYY++AS R I
Sbjct: 241 HNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRV 300
Query: 300 TTTAIVRYSDSKGLASPDLPKAP---VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGG 356
T I++Y++SKG A LP P +S+NQ RS RWN++AS ARPNPQGSF YG
Sbjct: 301 TGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGS 360
Query: 357 IPINRTIRLANTAHL-VNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPA 415
I + L N + ++GK R +NG+S+ N TP++ A+ + ++V+K D P
Sbjct: 361 INVTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRLADKLKV-KDVYKL----DFPK 415
Query: 416 DEIEN-VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKS 474
+ + ++++ TY+ FME+VL+N MQS+ + GYAFF VGM+ G W + R +
Sbjct: 416 RPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGT 475
Query: 475 YNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLR 534
YN D ++R TIQV+P W+AIL+S+DN G WNLR+ + YLGQ+ Y+ V + +
Sbjct: 476 YNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNK 535
Query: 535 DEYNMPDNALLCGIVANMSKPTPYS 559
E+ PDN L CG ++ + KP S
Sbjct: 536 TEFGHPDNVLYCGALSKLQKPQKVS 560
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May be a monocopper oxidase of unknown specificity. Involved in directional growth processes, possibly by participating in cell wall expansion. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/550 (46%), Positives = 355/550 (64%), Gaps = 15/550 (2%)
Query: 20 GLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE 79
G AG P + + ++Y T SPLG+PQQ I +NG+FPGP IN+TTN N+ +NV N LDE
Sbjct: 19 GFSFAGDPYVSYDFTLSYITASPLGVPQQVIAVNGKFPGPVINATTNYNVHVNVLNHLDE 78
Query: 80 PFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGG 139
P LLTWPG+Q ++NSWQDGVLGTNCPIPP N+TY Q+KDQIGSY Y PS F RA+GG
Sbjct: 79 PLLLTWPGVQMRRNSWQDGVLGTNCPIPPNWNFTYDFQLKDQIGSYFYSPSLNFQRASGG 138
Query: 140 FGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGK 199
FG L I++R +VP+P+ + + +IGDWYT++H L + LDSGK LG PDGVLINGK
Sbjct: 139 FGALIINNRDLVPIPFTE-PDGEIIFIIGDWYTQNHTALRRILDSGKELGMPDGVLINGK 197
Query: 200 SGRLDYDSD-GKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV 258
G Y+S G + GK Y+ R+ NVG+ TSLNFRIQ H + L+E EG +
Sbjct: 198 -GPFKYNSSVPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTS 256
Query: 259 QNEYESLDVHVGQCFTVLVTANQDP-KDYYLIASTRFTRTV----ITTTAIVRYSDSKGL 313
Q + DVHVGQ ++ LVT +Q+ DYY++AS RF +T I+ YS+SKG
Sbjct: 257 QMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGP 316
Query: 314 ASPDLPKAP--VGWDWS-LNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAH 370
AS LP + V WS +NQ R+ + N +AS ARPNPQGSFHYG I I RT L +
Sbjct: 317 ASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSLPP 376
Query: 371 L-VNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMD 429
+NGK+R +NG+S+VN TP++ A+ + + + D+P DE + L ++++
Sbjct: 377 TKINGKLRATLNGISFVNPSTPMRLADDHKVKGDYML--DFPDRPLDE-KLPRLSSSIIN 433
Query: 430 ATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVF 489
ATYK F++++ +N +QS+ +DGYAF+ V M+ G W+ D+ SYN DAV+R T++V+
Sbjct: 434 ATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVY 493
Query: 490 PNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIV 549
P W A+L+S+DN G+WN+R +R YLGQ+ Y+ + + + E + P+N + CG +
Sbjct: 494 PGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCGAL 553
Query: 550 ANMSKPTPYS 559
M K +S
Sbjct: 554 QAMQKEQHHS 563
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/564 (47%), Positives = 370/564 (65%), Gaps = 18/564 (3%)
Query: 6 LMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTT 65
L L+CF A S + A P + + V+Y T SPLG+PQQ I +NGQFPGP +N+TT
Sbjct: 8 LASFLLCF--ALLSAVSFAADPFVSYDFRVSYLTASPLGVPQQVIAVNGQFPGPLLNATT 65
Query: 66 NDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSY 125
N N+V+NVFN LDEP LLTWPGIQ ++NSWQDGVLGTNCPIPP N+TY QVKDQIGS+
Sbjct: 66 NYNVVVNVFNHLDEPLLLTWPGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGSF 125
Query: 126 IYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG 185
Y PS F RA+GGFG + I++R ++P+P+ + + + +IGDWYT+ H L + LDSG
Sbjct: 126 FYSPSLNFQRASGGFGPIVINNRDIIPIPFPQ-PDGELIFIIGDWYTQDHKALRRALDSG 184
Query: 186 KLLGKPDGVLINGKSGRLDYDSD-GKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQG 244
K LG PDGVLINGK G Y+S G + F ++ GK Y+ R+ NVG+ TSLNFRIQ
Sbjct: 185 KELGMPDGVLINGK-GPYKYNSSVPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQN 243
Query: 245 HTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDP-KDYYLIASTRFTRTV----I 299
H++ LVE EG + Q + DVHVGQ ++ LVT +QD DYY++AS RF +
Sbjct: 244 HSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRV 303
Query: 300 TTTAIVRYSDSKGLASPDL--PKAPVGWDWS-LNQFRSFRWNLTASAARPNPQGSFHYGG 356
T AI+ YS+SKG S L PK V WS ++Q ++ R N +AS ARPNPQGSFHYG
Sbjct: 304 TGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQ 363
Query: 357 IPINRTIRLANT-AHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPA 415
I I T L + ++NG +R +NG+S+VN TP++ A+ + + +K + D+P
Sbjct: 364 INITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADRNKV-KGAYKLD-FPDRPF 421
Query: 416 DEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSY 475
+ + L ++++ATYK F+++V +N +QS+ +DGY+FF VGM+ G W+ DK+ SY
Sbjct: 422 N--RPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSY 479
Query: 476 NLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRD 535
N DA+SR TI+V+P W A+L+S+DN G+WN+R +R YLG++ Y+ + + +
Sbjct: 480 NNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKT 539
Query: 536 EYNMPDNALLCGIVANMSKPTPYS 559
E + PDN L CG + N+ K +S
Sbjct: 540 EMDPPDNVLYCGALKNLQKEQHHS 563
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 | Back alignment and function description |
|---|
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 266/581 (45%), Gaps = 57/581 (9%)
Query: 7 MMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTN 66
++L F G+ GS + W V Y +P + INGQFPGP I +
Sbjct: 12 FLILFFFGLILAFGISSEGSQIRHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAG 71
Query: 67 DNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGS 124
D +V+ + NKL E ++ W GI + W DG + C I PG+ + Y V D G+
Sbjct: 72 DTVVVELINKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGT 130
Query: 125 YIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRS--HVELGKQL 182
+ YH G R+AG +G L + P++ + + LL+ DW+ +S E+G
Sbjct: 131 FFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH--YDGEINLLLSDWWHQSIHKQEVGLSS 188
Query: 183 DSGKLLGKPDGVLINGKSGRLDYDSDGKGDN----------EP----LFTMKAGKVYKYR 228
+ +G+P +L+NG+ G+ D K D+ EP +F + K Y+ R
Sbjct: 189 KPIRWIGEPQTILLNGR-GQFDCSIAAKYDSNLEPCKLKGSEPCAPYIFHVMPKKTYRIR 247
Query: 229 ICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDP-KDYY 287
I + +LNF I H + +VE +G++V +D++ G+ ++VL+T +Q+P ++Y+
Sbjct: 248 IASTTALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYW 307
Query: 288 LIASTRF----TRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASA 343
+ TR T +T + S SK SP P+ P WD ++ ++F + +TA+
Sbjct: 308 VSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPP-PETP-AWD-DFDRSKNFTYRITAAM 364
Query: 344 ARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETP----LKFAEYYG 399
P P + NR I L NT +++NG V++A+N VS TP +KF +
Sbjct: 365 GSPKPP-------VKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHA 417
Query: 400 I----PEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ------NTMQS 449
P EVF + D P E + V ++++L+N + +
Sbjct: 418 FDQNPPPEVFPEDYDIDTPPTN-EKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHP 476
Query: 450 WILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLR 509
W L G+ F+ +G G + ++ S NL + R T+ +FP W AI DN G+W
Sbjct: 477 WHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFH 536
Query: 510 SNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVA 550
+I ++G + + + K +P AL CG A
Sbjct: 537 CHIEPHLHMGMGVVFAEGVEKVG-----RIPTKALACGGTA 572
|
May be involved in a redox system involving ascorbic acid. Cucurbita maxima (taxid: 3661) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 | Back alignment and function description |
|---|
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 262/557 (47%), Gaps = 57/557 (10%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQ 89
+ W V Y +P + INGQFPGP I + D++V+ + NKL E ++ W GI
Sbjct: 6 YKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGIL 65
Query: 90 HKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSR 148
+ W DG + C I PG+ + Y V D G++ YH G R+AG +G L +
Sbjct: 66 QRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPP 124
Query: 149 SVVPVPYNRFVEDDFTLLIGDWYTRS--HVELGKQLDSGKLLGKPDGVLINGKSGRLDYD 206
P++ + + LL+ DW+ +S E+G + +G+P +L+NG+ G+ D
Sbjct: 125 QGKKEPFH--YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGR-GQFDCS 181
Query: 207 SDGKGDN--EP------------LFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEM 252
K D+ EP +F + K Y+ RI + +LNF I H + +VE
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241
Query: 253 EGSHVVQNEYESLDVHVGQCFTVLVTANQDP-KDYYLIASTRF----TRTVITTTAIVRY 307
+G++V +D++ G+ ++VL+T +Q+P ++Y++ TR T +T +
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPN 301
Query: 308 SDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLAN 367
S SK SP P+ P WD ++ ++F + +TA+ P P F NR I L N
Sbjct: 302 SVSKLPTSPP-PQTP-AWD-DFDRSKNFTYRITAAMGSPKPPVKF-------NRRIFLLN 351
Query: 368 TAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGI--------PEEVFKYNVISDKPADEIE 419
T +++NG V++A+N VS TP A Y + P EVF + D P E
Sbjct: 352 TQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN-E 410
Query: 420 NVTLQPNVMDATYKAFMEIVLEN----RQNTMQS--WILDGYAFFAVGMEPGTWNPDKRK 473
+ V ++++L+N ++N ++ W L G+ F+ +G G ++ ++
Sbjct: 411 KTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEES 470
Query: 474 SYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSL 533
S NL + R T+ +FP W AI DN G+W +I ++G + + + K
Sbjct: 471 SLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVG- 529
Query: 534 RDEYNMPDNALLCGIVA 550
+P AL CG A
Sbjct: 530 ----RIPTKALACGGTA 542
|
May be involved in a redox system involving ascorbic acid. Cucurbita pepo var. melopepo (taxid: 3665) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 | Back alignment and function description |
|---|
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 265/583 (45%), Gaps = 57/583 (9%)
Query: 6 LMMLLICFLAAATSGLVEAGSPTF-FFTWNVTYGTISPLGIPQQGILINGQFPGPNINST 64
L L++ + L EAG P + W+V Y SP + + ING+FPGP I +
Sbjct: 15 LSFLVLSIIFGFGITLSEAGFPKIKHYKWDVEYMFWSPDCVENIVMGINGEFPGPTIRAN 74
Query: 65 TNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQI 122
D +V+ + NKL E ++ W GI + W DG + C I PG+ +TY V D+
Sbjct: 75 AGDIVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFTYRFVV-DKA 133
Query: 123 GSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRS--HVELGK 180
G+Y YH G R+AG +G L + P++ +++ LL+ DW+ +S E+G
Sbjct: 134 GTYFYHGHLGMQRSAGLYGSLIVDPPEGRSEPFH--YDEEINLLLSDWWHQSVHKQEVGL 191
Query: 181 QLDSGKLLGKPDGVLINGK------------SGRLDYDSDGKGDNEP-LFTMKAGKVYKY 227
+ +G+P +LINGK G + GK P + ++ K Y+
Sbjct: 192 SSKPMRWIGEPQSILINGKGQFDCSIAAKYNQGLKQCELSGKEKCAPFILHVQPKKTYRI 251
Query: 228 RICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYY 287
RI + SLNF I H + +VE +G++V +D++ G+ ++VL+T +Q+P + Y
Sbjct: 252 RIASTTALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENY 311
Query: 288 LIA---STRFTRTV--ITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTAS 342
++ R +T +T + S SK SP P+ P W+ ++ ++F + + A+
Sbjct: 312 WVSIGVRARLPKTPPGLTLLNYLPNSASKLPISPP-PETP-HWE-DFDRSKNFTFRIFAA 368
Query: 343 AARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETP--------LKF 394
P P + NR + L NT + +NG +++A+N VS TP L
Sbjct: 369 MGSPKPPVRY-------NRRLFLLNTQNRINGFMKWAINNVSLALPPTPYLAAMKMRLNT 421
Query: 395 AEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLEN------RQNTMQ 448
A P E F N + P E T V ++++L+N + +
Sbjct: 422 AFNQNPPPETFPLNYDINNPPPNPETTTGN-GVYKFNMGETVDVILQNANMLNPNMSEIH 480
Query: 449 SWILDGYAFFAVGMEPGT-WNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507
W L G+ F+ +G G + P+ K NL + R T+ +FP W AI DN G+W
Sbjct: 481 PWHLHGHDFWVLGYGEGKFYAPEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWA 540
Query: 508 LRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVA 550
+I ++G + + +H + +P AL CG A
Sbjct: 541 FHCHIEPHLHMGMGVVFAEGVHMVGM-----IPPKALACGSTA 578
|
May be involved in a redox system involving ascorbic acid. Cucumis sativus (taxid: 3659) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 | Back alignment and function description |
|---|
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 249/562 (44%), Gaps = 57/562 (10%)
Query: 28 TFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWP 86
T F W+V Y SP G + INGQFPGP I + D + +++ NKL E ++ W
Sbjct: 30 TRHFKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVIHWH 89
Query: 87 GIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCI 145
GI+ W DG + C I PG+ + Y +V D+ G+Y YH G R+AG +G L +
Sbjct: 90 GIRQIGTPWADGTAAISQCAINPGETFLYRFKV-DKAGTYFYHGHYGMQRSAGLYGSLIV 148
Query: 146 HSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKL--LGKPDGVLINGKSGRL 203
P++ + +F LL+ DW+ + E L S L +G+P +L+NG+ G+
Sbjct: 149 EVGEGEKEPFH--YDGEFNLLLSDWWHKGSHEQEVDLSSNPLRWIGEPQTLLLNGR-GQY 205
Query: 204 DYDSDGKGDNEPL---------------FTMKAGKVYKYRICNVGVKTSLNFRIQGHTMK 248
+ + PL ++ K+Y+ R+ + SL+ I GH M
Sbjct: 206 NCSLAARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYRLRVASTTALGSLSLAIGGHKMV 265
Query: 249 LVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTA--IVR 306
+VE +G++V + +D++ G+ ++VL +QDP Y I+ R T ++
Sbjct: 266 VVEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKNYWISINVRGREPKTPQGLTLLN 325
Query: 307 YSDSKGLASPDLPKAPVGWDWS-LNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRL 365
Y + P LP P+ W+ N +SF + A P P H R I L
Sbjct: 326 YLPNSASKFPTLP-PPIAPLWNDYNHSKSFSNKIFALMGSPKPPPQNH-------RRIIL 377
Query: 366 ANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGI-------PEEVF--KYNVISDKPAD 416
NT + ++G ++A+N VS V + YGI P + F Y+V+ P
Sbjct: 378 LNTQNKIDGYTKWAINNVSLVLPTQLYLGSIRYGINAFDTKPPPDNFPKDYDVLKQAPN- 436
Query: 417 EIENVTLQPNVMDATYKAFMEIVLENRQ------NTMQSWILDGYAFFAVGMEPGTWNPD 470
N T V + ++I+L+N + + W L G+ F+ +G G ++
Sbjct: 437 --SNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEK 494
Query: 471 KRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHK 530
K +NL + R T +FP W A+ DN G+W +I ++G + + +H
Sbjct: 495 DVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMGMGVIFAEGVHL 554
Query: 531 RSLRDEYNMPDNALLCGIVANM 552
+P AL CG+ M
Sbjct: 555 VK-----KIPKEALACGLTGKM 571
|
May be involved in a redox system involving ascorbic acid. Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 235/529 (44%), Gaps = 54/529 (10%)
Query: 50 ILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDG-VLGTNCPIPP 108
+ +NGQFPGP I + D ++I V N + + W GI+ + W DG T CPI P
Sbjct: 50 VTVNGQFPGPTIVAREGDTILIKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQP 109
Query: 109 GKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIG 168
G+NY + + Q G+ +H + RA G + I + VP P+ + ++ T+++
Sbjct: 110 GQNYLHNFTLTGQRGTLWWHAHILWLRATV-HGAIVILPKLGVPYPFPKPYKEK-TIVLS 167
Query: 169 DWYTRSHVELGKQLDS-GKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKY 227
+W+ EL + G D ING SG + S+ + ++AGK Y
Sbjct: 168 EWWKSDVEELINEASRIGTAPSASDAHTINGHSGSI---SNCPSQSSYGLPVRAGKTYML 224
Query: 228 RICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYY 287
RI N + L F+I GH + +VE++ + + +++ + GQ VL+TAN + Y
Sbjct: 225 RIINAALNEELFFKIAGHVLTVVEVDAVYTKPYKTDTVFIAPGQTTNVLLTANANAGSNY 284
Query: 288 LIASTRFTRTVI-----TTTAIVRY-------SDSKGLASPDLPKAPVGWDWSLNQF-RS 334
++A+T FT I T TA + Y S SK LP P W +F RS
Sbjct: 285 MVAATTFTDAHIPYDNVTATATLHYIGHTSTVSTSKKTVLASLP--PQNATWVATKFTRS 342
Query: 335 FRW--NLTASAARPN--PQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSET 390
R +L A P F G+ N N LV G +N V++ +T
Sbjct: 343 LRSLNSLEYPARVPTTVEHSLFFTVGLGANPCQSCNNGVRLVAG-----INNVTFTMPKT 397
Query: 391 PLKFAEYYGIPEEVFK--YNVISDKPADEIENVTLQPNV--MDAT------YKAFMEIVL 440
L A ++ I VF + P D V L N M T Y A ++IVL
Sbjct: 398 ALLQAHFFNI-SGVFTDDFPAKPSNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVL 456
Query: 441 ENRQNTM---QSWILDGYAFFAVGMEPGTWNPDKR-KSYNLIDAVSRYTIQVFPNCWAAI 496
+N + + L G+ FF VG G +NP+K K++NL+D V R T+ V W AI
Sbjct: 457 QNTAMILSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAI 516
Query: 497 LVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALL 545
DN G+W + ++ +L+ + L + D + PD +LL
Sbjct: 517 RFIADNPGVWFMHCHL--------ELHTTWGLKMAFVVDNGHGPDQSLL 557
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 561 | ||||||
| 449463830 | 553 | PREDICTED: L-ascorbate oxidase homolog [ | 0.983 | 0.998 | 0.658 | 0.0 | |
| 449515772 | 553 | PREDICTED: L-ascorbate oxidase homolog [ | 0.983 | 0.998 | 0.658 | 0.0 | |
| 356540081 | 552 | PREDICTED: L-ascorbate oxidase homolog [ | 0.976 | 0.992 | 0.671 | 0.0 | |
| 449463836 | 553 | PREDICTED: L-ascorbate oxidase homolog [ | 0.953 | 0.967 | 0.679 | 0.0 | |
| 449515778 | 553 | PREDICTED: L-ascorbate oxidase homolog [ | 0.953 | 0.967 | 0.675 | 0.0 | |
| 449439217 | 553 | PREDICTED: L-ascorbate oxidase homolog [ | 0.960 | 0.974 | 0.669 | 0.0 | |
| 449517263 | 553 | PREDICTED: LOW QUALITY PROTEIN: L-ascorb | 0.960 | 0.974 | 0.667 | 0.0 | |
| 224056915 | 551 | hypothetical protein POPTRDRAFT_750403 [ | 0.982 | 1.0 | 0.665 | 0.0 | |
| 255564776 | 551 | multicopper oxidase, putative [Ricinus c | 0.982 | 1.0 | 0.663 | 0.0 | |
| 224073106 | 553 | predicted protein [Populus trichocarpa] | 0.982 | 0.996 | 0.672 | 0.0 |
| >gi|449463830|ref|XP_004149634.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/560 (65%), Positives = 459/560 (81%), Gaps = 8/560 (1%)
Query: 2 VATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNI 61
+A + +L+C AA V P FFFTWNVTYGTISPLG+PQQGILINGQFPGPN+
Sbjct: 1 MAGMMFTMLLCLSAAGMMATVRGEDPYFFFTWNVTYGTISPLGVPQQGILINGQFPGPNV 60
Query: 62 NSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121
NSTTN+NLVINVFN LDEPFLL W GIQH+KNSWQDG+LGTNCPIPPG N+TY+ QVKDQ
Sbjct: 61 NSTTNNNLVINVFNNLDEPFLLHWSGIQHRKNSWQDGLLGTNCPIPPGTNFTYHFQVKDQ 120
Query: 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181
IGS+ Y+PST HRAAGGFGG+ ++SR ++PVPY EDD+T+LIGDWYT+SH L +
Sbjct: 121 IGSFFYYPSTAMHRAAGGFGGIRVNSRLLIPVPYAD-PEDDYTVLIGDWYTKSHTTLKQF 179
Query: 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241
LDSG+ + +PDGVLINGK+ + D G +EPLFTMK GK YKYR+CNVG+K+SLNFR
Sbjct: 180 LDSGRSIARPDGVLINGKTSKDD------GIDEPLFTMKPGKTYKYRVCNVGLKSSLNFR 233
Query: 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITT 301
QGHTMKLVEMEGSH VQN+Y+SLDVHVGQCF+VLVTANQ+PKDYY++ASTRF ++ +
Sbjct: 234 FQGHTMKLVEMEGSHTVQNDYKSLDVHVGQCFSVLVTANQEPKDYYMVASTRFIKSALVG 293
Query: 302 TAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
IVRY++ KG ASP++P AP+GW WSLNQFR+FRWNLTASAARPNPQGS+HYG I I R
Sbjct: 294 KGIVRYTNGKGPASPEIPNAPMGWAWSLNQFRTFRWNLTASAARPNPQGSYHYGSINITR 353
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKP-ADEIEN 420
TI+L N+A V+GK+R+A+NGVS+V+ ETPLK AEY+ I ++VFKY+ ISD+ A+ +
Sbjct: 354 TIKLVNSATKVDGKLRYAINGVSHVDPETPLKLAEYFEITDKVFKYDTISDEGLAEGVTT 413
Query: 421 VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDA 480
VT+ PNV++ T++ F+EI+ EN + ++QSW LDGY+FFAV +EPG W+P+KR +YNL+DA
Sbjct: 414 VTVAPNVVNTTFRNFIEIIFENHEKSLQSWHLDGYSFFAVAIEPGRWSPEKRSNYNLLDA 473
Query: 481 VSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP 540
VSR+TIQVFP WAAIL++ DNAGMWNLRS + E YLGQQLY+SV+ RSLRDEYN+P
Sbjct: 474 VSRHTIQVFPKSWAAILLTFDNAGMWNLRSELTENRYLGQQLYMSVQSPARSLRDEYNIP 533
Query: 541 DNALLCGIVANMSKPTPYSL 560
D LLCG+V ++ P PY++
Sbjct: 534 DKTLLCGLVKDLPLPKPYTI 553
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449515772|ref|XP_004164922.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/560 (65%), Positives = 459/560 (81%), Gaps = 8/560 (1%)
Query: 2 VATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNI 61
+A + +L+C AA V P FFFTWNVTYGTISPLG+PQQGILINGQFPGPN+
Sbjct: 1 MAGMMFTMLLCLSAAGMMATVRGEDPYFFFTWNVTYGTISPLGVPQQGILINGQFPGPNV 60
Query: 62 NSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121
NSTTN+NLVINVFN LDEPFLL W GIQH+KNSWQDG+LGTNCPIPPG N+TY+ QVKDQ
Sbjct: 61 NSTTNNNLVINVFNNLDEPFLLHWSGIQHRKNSWQDGLLGTNCPIPPGTNFTYHFQVKDQ 120
Query: 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181
IGS+ Y+PST HRAAGGFGG+ ++SR ++PVPY EDD+T+LIGDWYT+SH L +
Sbjct: 121 IGSFFYYPSTAMHRAAGGFGGIRVNSRLLIPVPYAD-PEDDYTVLIGDWYTKSHTTLKQF 179
Query: 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241
LDSG+ + +PDGVLINGK+ + D G +EPLFTMK GK YKYR+CNVG+KTSLNFR
Sbjct: 180 LDSGRSIARPDGVLINGKTSKDD------GIDEPLFTMKPGKTYKYRVCNVGLKTSLNFR 233
Query: 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITT 301
QGHTMKLVEMEGSH VQN+Y+SLDVHVGQCF+VLVTA+Q+PKDYY++ASTRF ++ +
Sbjct: 234 FQGHTMKLVEMEGSHTVQNDYKSLDVHVGQCFSVLVTADQEPKDYYMVASTRFIKSALVG 293
Query: 302 TAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
IVRY++ KG ASP++P AP+GW WSLNQFR+FRWNLTASAARPNPQGS+HYG I I R
Sbjct: 294 KGIVRYTNGKGPASPEIPNAPMGWAWSLNQFRTFRWNLTASAARPNPQGSYHYGSINITR 353
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKP-ADEIEN 420
TI+L N+A V+GK+R+A+NGVS+V+ ETPLK AEY+ I ++VFKY+ ISD+ A+ +
Sbjct: 354 TIKLVNSATKVDGKLRYAINGVSHVDPETPLKLAEYFEITDKVFKYDTISDEGLAEGVTT 413
Query: 421 VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDA 480
VT+ PNV++ T++ F+EI+ EN + ++QSW LDGY+FFAV +EPG W+P+KR +YNL+DA
Sbjct: 414 VTVAPNVVNTTFRNFIEIIFENHEKSLQSWHLDGYSFFAVAIEPGRWSPEKRSNYNLLDA 473
Query: 481 VSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP 540
VSR+TIQVFP WAAIL++ DNAGMWNLRS + E YLGQQLY+SV+ RSLRDEYN+P
Sbjct: 474 VSRHTIQVFPKSWAAILLTFDNAGMWNLRSELTENRYLGQQLYMSVQSPARSLRDEYNIP 533
Query: 541 DNALLCGIVANMSKPTPYSL 560
D LLCG+V ++ P PY++
Sbjct: 534 DKTLLCGLVKDLPLPKPYTI 553
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540081|ref|XP_003538519.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/557 (67%), Positives = 458/557 (82%), Gaps = 9/557 (1%)
Query: 5 RLMMLLI-CFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINS 63
R+M+L++ C + +V P +FTWNVTYGTISPLGIPQQGI INGQFPGPNINS
Sbjct: 3 RVMLLVLSCLWIESLLTVVRGEDPYLYFTWNVTYGTISPLGIPQQGIFINGQFPGPNINS 62
Query: 64 TTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG 123
T+N+NLVINVFN LDEPFL TW GIQH+KNSWQDGV GTNCPIPPG N+TY +QVKDQIG
Sbjct: 63 TSNNNLVINVFNNLDEPFLFTWNGIQHRKNSWQDGVAGTNCPIPPGTNFTYRIQVKDQIG 122
Query: 124 SYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLD 183
SY Y+PST HRAAGGFGGL ++SR ++PVPY ED++T+LIGDWYT+SH L K LD
Sbjct: 123 SYFYYPSTAMHRAAGGFGGLRVNSRLLIPVPYPD-PEDEYTVLIGDWYTKSHTILRKLLD 181
Query: 184 SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQ 243
SG+ LG+P+GVLINGK+ + G G +EPLFTMK K YKYRICNVG+K SLN+RIQ
Sbjct: 182 SGRSLGRPEGVLINGKTAK------GDGKDEPLFTMKPAKTYKYRICNVGLKNSLNYRIQ 235
Query: 244 GHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTA 303
GH+MKLVEMEGSHVVQN Y+SLDVHVG+CF+VLVTA+++PKDYY++ASTRFT+TV+
Sbjct: 236 GHSMKLVEMEGSHVVQNMYDSLDVHVGECFSVLVTADKEPKDYYMVASTRFTKTVLIGKG 295
Query: 304 IVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTI 363
I+RY++ KG ASPD+P APVGW WSLNQF +FRWNLTASAARPNPQGS+ YG I I RTI
Sbjct: 296 IIRYTNGKGPASPDIPPAPVGWAWSLNQFHTFRWNLTASAARPNPQGSYKYGQINITRTI 355
Query: 364 RLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIEN-VT 422
+L N+ NGK+R+A+NGVS+V+ ETPLK AEY+GI ++VFKY+ I D P+ I N VT
Sbjct: 356 KLVNSVSKSNGKLRYALNGVSHVDPETPLKLAEYFGISDKVFKYDTIPDNPSPNIGNAVT 415
Query: 423 LQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVS 482
+QPNV++ T++ F+EI+ EN + T+QS+ LDGY+FF +G+EPGTW P+KRKSYNL+DAVS
Sbjct: 416 VQPNVLNITHRNFIEIIFENPEKTIQSYHLDGYSFFVLGIEPGTWTPEKRKSYNLLDAVS 475
Query: 483 RYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDN 542
R+T+ VFP CWAAI+++ DNAGMWNLRS+I E YLGQQLY+SV + SLRDEYNMPD+
Sbjct: 476 RHTVHVFPKCWAAIMLTFDNAGMWNLRSDIAESRYLGQQLYISVLSPEHSLRDEYNMPDS 535
Query: 543 ALLCGIVANMSKPTPYS 559
LLCG+V N+ KP PYS
Sbjct: 536 NLLCGLVKNLPKPAPYS 552
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449463836|ref|XP_004149637.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/543 (67%), Positives = 448/543 (82%), Gaps = 8/543 (1%)
Query: 19 SGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD 78
+ V P FFFTWNVTYGTISPLG+PQQGILINGQFPGPNINST+N+NLVINVFN LD
Sbjct: 18 TATVRGEDPYFFFTWNVTYGTISPLGVPQQGILINGQFPGPNINSTSNNNLVINVFNNLD 77
Query: 79 EPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAG 138
EPFLL W GIQH+KNSWQDG+LGTNCPI PG NYTY+ QVKDQIGS+ Y+PST HRAAG
Sbjct: 78 EPFLLHWSGIQHRKNSWQDGLLGTNCPILPGTNYTYHFQVKDQIGSFFYYPSTAMHRAAG 137
Query: 139 GFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLING 198
GFGGL ++SR ++PVPY EDD+T+LIGDWYT+SH L + LDSG+ + +PDGVLING
Sbjct: 138 GFGGLRVNSRLLIPVPYAD-PEDDYTVLIGDWYTKSHTALKQLLDSGRSIARPDGVLING 196
Query: 199 KSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV 258
KS + G G +EPLFTMK GK YKYR+CNVG+K+SLNFR QGHTMKLVEMEGSH V
Sbjct: 197 KSAK------GDGTDEPLFTMKPGKTYKYRVCNVGLKSSLNFRFQGHTMKLVEMEGSHTV 250
Query: 259 QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDL 318
QN+YESLDVHVGQCF+VLVTANQ+PKDYY++ASTRF + V+ IVRY D KG ASP++
Sbjct: 251 QNDYESLDVHVGQCFSVLVTANQEPKDYYMVASTRFIKNVLVGKGIVRYIDGKGPASPEI 310
Query: 319 PKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRF 378
P+AP+GW WSLNQFR+FRWNLTASAARPNPQGS+HYG I I RTI+L N+ V+GK+R+
Sbjct: 311 PEAPMGWAWSLNQFRTFRWNLTASAARPNPQGSYHYGSINITRTIKLVNSISKVDGKLRY 370
Query: 379 AVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKP-ADEIENVTLQPNVMDATYKAFME 437
A+NGVS+V+ ETPLK AEY+ + ++VFKY+ ISD+ A+ VT+ PNV++AT++ F+E
Sbjct: 371 AINGVSHVDPETPLKLAEYFEVADKVFKYDTISDEGLAEGATTVTVAPNVVNATFRNFIE 430
Query: 438 IVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAIL 497
I+ EN + ++QSW LDGY+FFAV +EPG W+P+KR +YNL+DAVSR+TIQVFP WAAIL
Sbjct: 431 IIFENHEKSLQSWHLDGYSFFAVAIEPGRWSPEKRANYNLLDAVSRHTIQVFPKSWAAIL 490
Query: 498 VSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMSKPTP 557
++ DNAGMWNLRS + E YLG QLY+SV RSLRDEYN+PDN LLCG+V +M P P
Sbjct: 491 LTFDNAGMWNLRSELLENRYLGSQLYVSVLSPARSLRDEYNIPDNTLLCGLVKDMPLPKP 550
Query: 558 YSL 560
Y++
Sbjct: 551 YTI 553
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449515778|ref|XP_004164925.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/543 (67%), Positives = 448/543 (82%), Gaps = 8/543 (1%)
Query: 19 SGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD 78
+ V P FFFTWNVTYGTISPLG+PQQGILINGQFPGPNINST+N+NLVINVFN LD
Sbjct: 18 TATVRGEDPYFFFTWNVTYGTISPLGVPQQGILINGQFPGPNINSTSNNNLVINVFNNLD 77
Query: 79 EPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAG 138
EPFLL W GIQH+KNSWQDG+LGTNCPI PG NYTY+ QVKDQIGS+ Y+PST HRAAG
Sbjct: 78 EPFLLHWSGIQHRKNSWQDGLLGTNCPILPGTNYTYHFQVKDQIGSFFYYPSTAMHRAAG 137
Query: 139 GFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLING 198
GFGGL ++SR ++PVPY EDD+T+LIGDWYT+SH L + LDSG+ + +PDGVLING
Sbjct: 138 GFGGLRVNSRLLIPVPYAD-PEDDYTVLIGDWYTKSHTALKQFLDSGRSIARPDGVLING 196
Query: 199 KSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV 258
K+ + G G +EPLFTMK GK YKYR+CNVG+K+SLNFR QGHTMKLVEMEGSH V
Sbjct: 197 KTAK------GDGTDEPLFTMKPGKTYKYRVCNVGLKSSLNFRFQGHTMKLVEMEGSHTV 250
Query: 259 QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDL 318
QN+Y+SLDVHVGQCF+VLVTANQ+PKDYY++ASTRF + V+ IVRY D KG ASP++
Sbjct: 251 QNDYQSLDVHVGQCFSVLVTANQEPKDYYMVASTRFIKNVLVGKGIVRYIDGKGPASPEI 310
Query: 319 PKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRF 378
P+AP+GW WSLNQFR+FRWNLTASAARPNPQGS+HYG I I RTI+L N+ V+GK+R+
Sbjct: 311 PEAPMGWAWSLNQFRTFRWNLTASAARPNPQGSYHYGSINITRTIKLVNSISKVDGKLRY 370
Query: 379 AVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKP-ADEIENVTLQPNVMDATYKAFME 437
A+NGVS+V+ ETPLK AEY+ + ++VFKY+ ISD+ A+ VT+ PNV++AT++ F+E
Sbjct: 371 AINGVSHVDPETPLKLAEYFEVADKVFKYDTISDEGLAEGATTVTVAPNVVNATFRNFIE 430
Query: 438 IVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAIL 497
I+ EN + ++QSW LDGY+FFAV +EPG W+P+KR +YNL+DAVSR+TIQVFP WAAIL
Sbjct: 431 IIFENHEKSLQSWHLDGYSFFAVAIEPGRWSPEKRANYNLLDAVSRHTIQVFPKSWAAIL 490
Query: 498 VSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMSKPTP 557
++ DNAGMWNLRS + E YLG QLY+SV RSLRDEYN+PDN LLCG+V +M P P
Sbjct: 491 LTFDNAGMWNLRSELLENRYLGSQLYVSVLSPARSLRDEYNIPDNTLLCGLVKDMPLPKP 550
Query: 558 YSL 560
Y++
Sbjct: 551 YTI 553
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439217|ref|XP_004137383.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/547 (66%), Positives = 451/547 (82%), Gaps = 8/547 (1%)
Query: 15 AAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVF 74
+ A V P FFFTWNVTYGTISPLG+PQQGILINGQFPGPNINSTTN+NLVINVF
Sbjct: 14 SVAAMQTVRGEDPYFFFTWNVTYGTISPLGVPQQGILINGQFPGPNINSTTNNNLVINVF 73
Query: 75 NKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFH 134
N LDEPFLL W GIQH+KNSWQDG+LGTNCPIPPG N+TY+ QVKDQIGS+ Y+PST H
Sbjct: 74 NNLDEPFLLHWSGIQHRKNSWQDGLLGTNCPIPPGTNFTYHFQVKDQIGSFFYYPSTAMH 133
Query: 135 RAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGV 194
+A G FGGL ++SR ++PVPY EDD+T+LIGDWYT+SH L K LDSG+ + +PDGV
Sbjct: 134 KAVGAFGGLRVNSRLLIPVPYAD-PEDDYTVLIGDWYTKSHSTLKKFLDSGRSIARPDGV 192
Query: 195 LINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEG 254
LING+ + G G +EPLFTMK K YKYRICNVG+KTSLNFRIQGHTMKLVEMEG
Sbjct: 193 LINGRIAK------GDGTDEPLFTMKPEKTYKYRICNVGLKTSLNFRIQGHTMKLVEMEG 246
Query: 255 SHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLA 314
SH VQN Y+SLDVHVGQCF+VLVTA++DPKDYY++ASTRFT+ ++ I+RY++ K A
Sbjct: 247 SHTVQNVYQSLDVHVGQCFSVLVTADKDPKDYYMVASTRFTKNILVGKGIIRYTNGKAPA 306
Query: 315 SPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNG 374
SP++P+AP GW WSLNQFR+FRWNLTASAARPNPQGS+HYG I I RTI++ N+A V+G
Sbjct: 307 SPEIPEAPRGWAWSLNQFRTFRWNLTASAARPNPQGSYHYGSINITRTIKIVNSATNVDG 366
Query: 375 KVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIEN-VTLQPNVMDATYK 433
K+R+A+NGVS+V+ ETPLK AEY+ + ++VFKY+ ISD+ + N VT+ PNV++AT++
Sbjct: 367 KLRYAINGVSHVDPETPLKLAEYFEVADKVFKYDTISDEGLSKTANIVTVAPNVLNATFR 426
Query: 434 AFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCW 493
F+EIV EN++ ++QSW LDGY+FFAV +EPG W+P+KRK+YNL+DAVSR+TIQVFP W
Sbjct: 427 NFVEIVFENQEKSLQSWHLDGYSFFAVAVEPGRWSPEKRKNYNLLDAVSRHTIQVFPKSW 486
Query: 494 AAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMS 553
AAIL+++DNAGMWNLRS + E YLGQQ+Y SV+ RSLRDEYN+PDN LLCG+V +M
Sbjct: 487 AAILLTLDNAGMWNLRSELTENRYLGQQMYFSVQSPARSLRDEYNIPDNTLLCGLVKDMP 546
Query: 554 KPTPYSL 560
P PY++
Sbjct: 547 LPPPYTI 553
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449517263|ref|XP_004165665.1| PREDICTED: LOW QUALITY PROTEIN: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/547 (66%), Positives = 450/547 (82%), Gaps = 8/547 (1%)
Query: 15 AAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVF 74
+ A V P FFFTWNVTYGTISPLG+PQQGILINGQFPGPNINSTTN+NLVINVF
Sbjct: 14 SVAAMQTVRGEDPYFFFTWNVTYGTISPLGVPQQGILINGQFPGPNINSTTNNNLVINVF 73
Query: 75 NKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFH 134
N LDEPFLL W GIQH+KNSWQDG+LGTNCPIPPG N+TY+ QVKDQIGS+ Y+PST H
Sbjct: 74 NNLDEPFLLHWSGIQHRKNSWQDGLLGTNCPIPPGTNFTYHFQVKDQIGSFFYYPSTAMH 133
Query: 135 RAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGV 194
+A G FGGL ++SR ++PVPY EDD+T+LIGDWYT+SH L K LDSG+ + +PDGV
Sbjct: 134 KAVGAFGGLRVNSRLLIPVPYAD-PEDDYTVLIGDWYTKSHSTLKKFLDSGRSIARPDGV 192
Query: 195 LINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEG 254
LING+ + G G +EPLFTMK K YKYRICNVG+KTSLNFRIQGHTMKLVEMEG
Sbjct: 193 LINGRIAK------GDGTDEPLFTMKPEKTYKYRICNVGLKTSLNFRIQGHTMKLVEMEG 246
Query: 255 SHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLA 314
SH VQN Y+SLDVHVGQCF+VLVTA++DPKDYY++ASTRFT+ ++ I+RY++ K A
Sbjct: 247 SHTVQNVYQSLDVHVGQCFSVLVTADKDPKDYYMVASTRFTKNILVGKGIIRYTNGKAPA 306
Query: 315 SPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNG 374
SP++P+AP GW WSLNQFR+FRWNLTASAARPNPQGS+HYG I I RTI++ N+A V+G
Sbjct: 307 SPEIPEAPRGWAWSLNQFRTFRWNLTASAARPNPQGSYHYGSINITRTIKIVNSATNVDG 366
Query: 375 KVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIEN-VTLQPNVMDATYK 433
K+R+A+NGVS+V+ ETPLK AEY+ + ++VFKY+ ISD+ + N VT+ PNV++AT++
Sbjct: 367 KLRYAINGVSHVDPETPLKLAEYFEVADKVFKYDTISDEGLSKTANIVTVAPNVLNATFR 426
Query: 434 AFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCW 493
F+EIV EN++ ++QSW LDGY+FFAV +EPG W+P+KRK+YNL+DAVSR+TIQ FP W
Sbjct: 427 NFVEIVFENQEKSLQSWHLDGYSFFAVAVEPGRWSPEKRKNYNLLDAVSRHTIQXFPKSW 486
Query: 494 AAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMS 553
AAIL+++DNAGMWNLRS + E YLGQQ+Y SV+ RSLRDEYN+PDN LLCG+V +M
Sbjct: 487 AAILLTLDNAGMWNLRSELTENRYLGQQMYFSVQSPARSLRDEYNIPDNTLLCGLVKDMP 546
Query: 554 KPTPYSL 560
P PY++
Sbjct: 547 LPPPYTI 553
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224056915|ref|XP_002299087.1| hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] gi|222846345|gb|EEE83892.1| hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/559 (66%), Positives = 454/559 (81%), Gaps = 8/559 (1%)
Query: 2 VATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNI 61
+A ++M+L+C L+A T V+ P FFTWNVTYGT SPLG+PQQ ILIN QFPGPNI
Sbjct: 1 MAGVMIMVLLC-LSAGTMLGVQGEDPYLFFTWNVTYGTRSPLGVPQQVILINDQFPGPNI 59
Query: 62 NSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121
NST+N+N+V+NVFN LDEPFLLTW G+Q +KNSWQDGVLGTNCPI PG N+TY+ QVKDQ
Sbjct: 60 NSTSNNNIVLNVFNNLDEPFLLTWSGVQQRKNSWQDGVLGTNCPILPGTNFTYHFQVKDQ 119
Query: 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181
IGSYIY+P+TG HRAAGGFGGL I+SR ++PVPY EDD+T+++ DWYT SH L K
Sbjct: 120 IGSYIYYPTTGMHRAAGGFGGLRINSRLLIPVPYAD-PEDDYTVILNDWYTSSHATLRKY 178
Query: 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241
LD G+ L +P GVLINGK+ + G G +EPLFTMK GK YKYRICN G+K +LNFR
Sbjct: 179 LDDGRSLARPTGVLINGKNAK------GDGKDEPLFTMKPGKTYKYRICNAGIKNTLNFR 232
Query: 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITT 301
IQGHTMKLVEMEGSHVVQN YE+LDVHVGQCF+VLVTANQ PKDYY++ +TRF + ++T
Sbjct: 233 IQGHTMKLVEMEGSHVVQNVYEALDVHVGQCFSVLVTANQAPKDYYMVTTTRFNKQILTA 292
Query: 302 TAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
I+RY++ KG ASP+LP+APVGW WSLNQFRSFRWNLTASAARPNPQGS+HYG I I R
Sbjct: 293 KGIIRYTNGKGPASPELPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGSINITR 352
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENV 421
TI+L N+A GK+R+A+NGVS+V+ ETPLK AEYYGI ++VFKYN I D P+ +I V
Sbjct: 353 TIKLVNSASREGGKLRYALNGVSHVDPETPLKIAEYYGIADKVFKYNTIKDMPSAKIGKV 412
Query: 422 TLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV 481
QPNV++ T++ F+EI+ EN + +MQS+ LDGY+FFAV +EPGTW P+KRK+YNL+DAV
Sbjct: 413 VTQPNVLNQTFRNFVEIIFENHEKSMQSYHLDGYSFFAVAIEPGTWTPEKRKNYNLLDAV 472
Query: 482 SRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPD 541
SR TIQVFP WAAI ++ DNAGMWN+RS +WE+ YLGQQLY+SV + SLRDEYN+PD
Sbjct: 473 SRTTIQVFPKSWAAIFLTFDNAGMWNIRSEMWEKTYLGQQLYVSVLSPELSLRDEYNIPD 532
Query: 542 NALLCGIVANMSKPTPYSL 560
NALLCG V + KP PY++
Sbjct: 533 NALLCGKVKGLPKPKPYTI 551
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255564776|ref|XP_002523382.1| multicopper oxidase, putative [Ricinus communis] gi|223537332|gb|EEF38961.1| multicopper oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/559 (66%), Positives = 451/559 (80%), Gaps = 8/559 (1%)
Query: 2 VATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNI 61
+A ++ML +C L+A + V P FFTWNVTYGT+SPLG+PQQ ILIN QFPGP I
Sbjct: 1 MAGVMLMLFLC-LSAGSLLQVHGEDPYLFFTWNVTYGTLSPLGVPQQVILINNQFPGPVI 59
Query: 62 NSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121
NST+N+N+VINVFN +DEPFLLTW G+Q +KNSWQ+GVLGTNCPIPPG N+TY+ QVKDQ
Sbjct: 60 NSTSNNNVVINVFNNIDEPFLLTWSGVQQRKNSWQEGVLGTNCPIPPGTNHTYHFQVKDQ 119
Query: 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181
IGS+IY+PST HRAAGGFGGL I+SR ++PVPY EDD+T+++ DWYT+SH L K
Sbjct: 120 IGSFIYYPSTAMHRAAGGFGGLHINSRLLIPVPYPD-PEDDYTVIVNDWYTKSHTSLRKS 178
Query: 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241
LDSG +G+P+GVLINGK+ + G G ++PLFTMK GK YKYRICN G+KTS+NFR
Sbjct: 179 LDSGVSIGRPEGVLINGKTAK------GNGKDKPLFTMKPGKTYKYRICNAGLKTSINFR 232
Query: 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITT 301
IQGHTMKLVEMEGSHVVQN YESLDVHVGQCF+VLVTANQ PKDYY++ASTRF +TV+
Sbjct: 233 IQGHTMKLVEMEGSHVVQNIYESLDVHVGQCFSVLVTANQAPKDYYMVASTRFLKTVLVG 292
Query: 302 TAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
IVRY++ KG ASP LPKAPVGW WSLNQFRSFRWNLTASAARPNPQGS+HYG I I R
Sbjct: 293 KGIVRYTNGKGQASPVLPKAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGSINITR 352
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENV 421
TI+L N+A GK+R+A+N VS+V ETPLK AEY+G+ +VFKY+ D P +I +
Sbjct: 353 TIKLVNSASTTGGKLRYAINSVSHVEPETPLKLAEYFGVANKVFKYDTFQDNPPAKIGKI 412
Query: 422 TLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV 481
QPNV++ T++ F+EI+ EN + ++QSW LDGY+FF V +EPGTW P+KRK+YNL+DAV
Sbjct: 413 VSQPNVLNMTFRNFVEIIFENPEKSIQSWHLDGYSFFVVAVEPGTWTPEKRKNYNLLDAV 472
Query: 482 SRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPD 541
SR T+QVFP WAAIL++ DNAGMWN+RS +WER YLGQQLY SV RSLRDEYN+PD
Sbjct: 473 SRTTVQVFPKSWAAILLTFDNAGMWNIRSEMWERTYLGQQLYASVLSPARSLRDEYNIPD 532
Query: 542 NALLCGIVANMSKPTPYSL 560
NALLCG+V + KP PY++
Sbjct: 533 NALLCGLVKGLPKPPPYTI 551
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073106|ref|XP_002303974.1| predicted protein [Populus trichocarpa] gi|222841406|gb|EEE78953.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/561 (67%), Positives = 455/561 (81%), Gaps = 10/561 (1%)
Query: 2 VATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNI 61
+A + ++L+C A G V P FFTWNVTYGT+SPLG+PQQ ILIN QFPGPNI
Sbjct: 1 MAGVMFLVLLCISAGTMLG-VRGEDPYLFFTWNVTYGTLSPLGVPQQVILINNQFPGPNI 59
Query: 62 NSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121
NST+N+N+VINVFN LDEPFLLTW GIQ +KNSWQDGVLGTNCPI PG NYTY+ QVKDQ
Sbjct: 60 NSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDGVLGTNCPILPGTNYTYHFQVKDQ 119
Query: 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181
IGSYIY+P+TG HRA GGFGGL I+SR ++PVPY EDD+T+++ DWY++SH L K
Sbjct: 120 IGSYIYYPTTGMHRATGGFGGLRINSRLLIPVPYAD-PEDDYTVILNDWYSKSHTALQKL 178
Query: 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241
LDSG+ L +PDGVL+NGK+ + G G +EPLFTMK GK YKYRICN G+K +LNFR
Sbjct: 179 LDSGRTLARPDGVLVNGKNAK------GDGKDEPLFTMKPGKTYKYRICNAGLKNTLNFR 232
Query: 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITT 301
IQGHTMKLVEMEGSHVVQN YESLDVHVGQCF+VLVTANQDPKDYY++ASTRF + V+T
Sbjct: 233 IQGHTMKLVEMEGSHVVQNVYESLDVHVGQCFSVLVTANQDPKDYYMVASTRFNKQVLTG 292
Query: 302 TAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
I+RY++ KG ASP+LP+APVGW WSLNQFRSFRWNLTASAARPNPQGS+HYG I I R
Sbjct: 293 KGIIRYTNGKGPASPELPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGSINITR 352
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIEN- 420
TI+L N+A GK+R+A+NGVS+VN ETPLK AEYYG+ ++VFKY+ I D P + N
Sbjct: 353 TIKLINSASQEGGKLRYALNGVSHVNPETPLKLAEYYGVADKVFKYDTILDSPQANVANA 412
Query: 421 -VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLID 479
+ QPNV++ T++ F+EI+ EN + +MQS+ LDGY+FFAV +EPGTW P+KRK YNL+D
Sbjct: 413 KIVTQPNVLNLTFRNFVEIIFENHEKSMQSYHLDGYSFFAVAVEPGTWTPEKRKHYNLLD 472
Query: 480 AVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNM 539
AVSR T+QV+P WAAIL++ DNAG+WN+RS +WER YLGQQLY SV RSLRDEYN+
Sbjct: 473 AVSRTTVQVYPKSWAAILLTFDNAGLWNIRSEMWERAYLGQQLYASVLSPARSLRDEYNL 532
Query: 540 PDNALLCGIVANMSKPTPYSL 560
PDN+LLCGIV +M KP PYS+
Sbjct: 533 PDNSLLCGIVKDMPKPAPYSI 553
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 561 | ||||||
| TAIR|locus:2092865 | 551 | sks13 "SKU5 similar 13" [Arabi | 0.982 | 1.0 | 0.653 | 6e-206 | |
| TAIR|locus:2193894 | 555 | sks12 "SKU5 similar 12" [Arabi | 0.975 | 0.985 | 0.625 | 7.3e-201 | |
| TAIR|locus:2092845 | 554 | sks11 "SKU5 similar 11" [Arabi | 0.971 | 0.983 | 0.628 | 2.2e-199 | |
| TAIR|locus:2193899 | 549 | sks14 "SKU5 similar 14" [Arabi | 0.973 | 0.994 | 0.634 | 1.2e-198 | |
| TAIR|locus:2201133 | 538 | sks7 "SKU5 similar 7" [Arabido | 0.934 | 0.973 | 0.549 | 2.1e-155 | |
| TAIR|locus:2174954 | 546 | sks17 "SKU5 similar 17" [Arabi | 0.932 | 0.957 | 0.540 | 2.7e-155 | |
| TAIR|locus:2199798 | 541 | sks5 "SKU5 similar 5" [Arabido | 0.935 | 0.970 | 0.540 | 4e-154 | |
| TAIR|locus:2036911 | 551 | sks8 "SKU5 similar 8" [Arabido | 0.953 | 0.970 | 0.533 | 1.2e-152 | |
| TAIR|locus:2120648 | 541 | sks4 "SKU5 similar 4" [Arabido | 0.928 | 0.963 | 0.539 | 3.2e-152 | |
| TAIR|locus:2033513 | 542 | SKS6 "SKU5-similar 6" [Arabido | 0.925 | 0.957 | 0.532 | 2e-150 |
| TAIR|locus:2092865 sks13 "SKU5 similar 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1992 (706.3 bits), Expect = 6.0e-206, P = 6.0e-206
Identities = 366/560 (65%), Positives = 443/560 (79%)
Query: 1 MVATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPN 60
M RL+ +L+C A+T LV AG P F++TWNVTYGT +PLGIPQQ ILINGQFPGPN
Sbjct: 1 MQGGRLLTVLVCL--ASTVALVSAGDPYFYYTWNVTYGTAAPLGIPQQVILINGQFPGPN 58
Query: 61 INSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKD 120
+NST+N+N+VINVFN LDEPFLLTW G+QH+KNSWQDGV GT+CPIP G N+TY+ Q KD
Sbjct: 59 LNSTSNNNVVINVFNNLDEPFLLTWSGLQHRKNSWQDGVTGTSCPIPAGTNFTYHFQPKD 118
Query: 121 QIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGK 180
QIGSY Y+PST HR AGGFGGL ++SR ++PVPY EDD T+LI DWY +SH L
Sbjct: 119 QIGSYFYYPSTALHRFAGGFGGLRVNSRLLIPVPYAD-PEDDRTILINDWYAKSHTALKN 177
Query: 181 QLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNF 240
LDSG+ LG PDGVLINGKSG+L G+N PLFTMK GK YKYRICNVG K++LNF
Sbjct: 178 FLDSGRTLGSPDGVLINGKSGKLG------GNNAPLFTMKPGKTYKYRICNVGFKSTLNF 231
Query: 241 RIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXX 300
RIQGH MKLVEMEGSHV+QN+Y+SLDVHVGQCF VLVTA+Q K+YY++AS
Sbjct: 232 RIQGHKMKLVEMEGSHVLQNDYDSLDVHVGQCFAVLVTADQVAKNYYMVASTRFLKKEVS 291
Query: 301 XXXXXXYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPIN 360
Y S AS D+PKAPVGW WSLNQFRSFRWNLTASAARPNPQGS+HYG I I
Sbjct: 292 TVGVMSYEGSNVQASSDIPKAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINIT 351
Query: 361 RTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIEN 420
RTI+LANT +LVNGKVRF NGVS+V++ETPLK AEY+G+ E+VFKYNVI D+PA +I
Sbjct: 352 RTIKLANTKNLVNGKVRFGFNGVSHVDTETPLKLAEYFGMSEKVFKYNVIKDEPAAKITT 411
Query: 421 VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDA 480
+T++PNV++ T++ F+E+V EN + +MQS+ LDGY+FFAV EPG W P+KR +YNL+DA
Sbjct: 412 LTVEPNVLNITFRTFVEVVFENHEKSMQSFHLDGYSFFAVASEPGRWTPEKRNNYNLLDA 471
Query: 481 VSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP 540
VSR+T+QV+P W+AIL++ DNAGMWN+RS WER YLGQQLY+SV ++SLRDEYN+P
Sbjct: 472 VSRHTVQVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSLRDEYNIP 531
Query: 541 DNALLCGIVANMSKPTPYSL 560
N LCGIV + PTPY++
Sbjct: 532 LNTNLCGIVKGLPLPTPYTI 551
|
|
| TAIR|locus:2193894 sks12 "SKU5 similar 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1944 (689.4 bits), Expect = 7.3e-201, P = 7.3e-201
Identities = 348/556 (62%), Positives = 439/556 (78%)
Query: 5 RLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINST 64
+L+ + +C +A AT +V+A P F WNVTYGT SPLG+PQQ ILINGQFPGPNINST
Sbjct: 6 KLLAVCLC-VATATVMMVQAEDPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINST 64
Query: 65 TNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGS 124
+N+N+++NVFN LDEPFL+TW GIQH+KN WQDG GT CPIPPG+N+TY+ Q KDQIGS
Sbjct: 65 SNNNVIVNVFNNLDEPFLITWAGIQHRKNCWQDGTAGTMCPIPPGQNFTYHFQPKDQIGS 124
Query: 125 YIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDS 184
Y Y+P+T HRAAGGFGGL ++SR ++PVPY EDD+T+LI DWYT+SH +L K LDS
Sbjct: 125 YFYYPTTAMHRAAGGFGGLRVNSRLLIPVPYAD-PEDDYTILINDWYTKSHTQLKKFLDS 183
Query: 185 GKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQG 244
G+ +G+PDG+LINGKSG+ D G ++PLFT+K GK Y+ RICNVG+K SLNFRIQ
Sbjct: 184 GRTIGRPDGILINGKSGKTD------GSDKPLFTLKPGKTYRVRICNVGLKASLNFRIQN 237
Query: 245 HTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXXXXX 304
H MKLVEMEGSHV+QN+Y+SLDVHVGQCF V+VTA+Q+PKDYY+IAS
Sbjct: 238 HKMKLVEMEGSHVLQNDYDSLDVHVGQCFGVIVTADQEPKDYYMIASTRFLKKPLTTTGL 297
Query: 305 XXYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIR 364
Y KG AS LP APVGW WSLNQ+RSFRWNLTASAARPNPQGS+HYG I I RTI+
Sbjct: 298 LRYEGGKGPASSQLPAAPVGWAWSLNQYRSFRWNLTASAARPNPQGSYHYGKINITRTIK 357
Query: 365 LANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKP-ADEIENVTL 423
L NT V+GK+R+A++GVS+ + ETPLK AEY+G+ ++VFKY+ ISD P D+I+N+ +
Sbjct: 358 LVNTQGKVDGKLRYALSGVSHTDPETPLKLAEYFGVADKVFKYDTISDNPNPDQIKNIKI 417
Query: 424 QPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSR 483
+PNV++ T++ F+E+V EN + ++QSW LDGY+FFAV +EPGTW P+KRK+YNL+DAVSR
Sbjct: 418 EPNVLNITHRTFIEVVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSR 477
Query: 484 YTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNA 543
+T+QV+P CWAAIL++ DN GMWN+RS ER YLGQQLY SV ++SLRDEYNMP+ +
Sbjct: 478 HTVQVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMPETS 537
Query: 544 LLCGIVANMSKPTPYS 559
L CG+V K PY+
Sbjct: 538 LQCGLVKGKPKVNPYA 553
|
|
| TAIR|locus:2092845 sks11 "SKU5 similar 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1930 (684.5 bits), Expect = 2.2e-199, P = 2.2e-199
Identities = 348/554 (62%), Positives = 433/554 (78%)
Query: 8 MLLIC-FLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTN 66
+L C +LAAA + +V A P F WNVTYGT+SPLG+PQQ ILINGQFPGPN+NST+N
Sbjct: 6 LLAACLYLAAAATVVVRAEDPYFHHVWNVTYGTVSPLGVPQQVILINGQFPGPNVNSTSN 65
Query: 67 DNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYI 126
+N++INVFN LDEPFLLTW GIQH+KN WQDG GT CPI PG NYTY+ Q KDQIGSY
Sbjct: 66 NNVIINVFNNLDEPFLLTWNGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYF 125
Query: 127 YHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGK 186
Y+PST HR+AGGFGGL ++SR ++PVPY EDD+T+LIGDWYT+SH +L K LDSG+
Sbjct: 126 YYPSTAMHRSAGGFGGLRVNSRLLIPVPYAD-PEDDYTVLIGDWYTKSHTQLKKFLDSGR 184
Query: 187 LLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHT 246
LG+PDG+LINGKSG+ G G + PLFT+K GK Y+ RICNVG+KTSLNFRIQ H
Sbjct: 185 TLGRPDGILINGKSGK------GDGSDAPLFTLKPGKTYRVRICNVGLKTSLNFRIQNHK 238
Query: 247 MKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXXXXXXX 306
+KLVEMEGSHV+QN+Y+SLDVHVGQC+ ++TANQ+ KDYY++AS
Sbjct: 239 LKLVEMEGSHVLQNDYDSLDVHVGQCYGTILTANQEAKDYYMVASSRFLKSVITTTGLLR 298
Query: 307 YSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLA 366
Y KG AS LP PVGW WSLNQFRSFRWNLTASAARPNPQGS+HYG I I RTI+L
Sbjct: 299 YEGGKGPASSQLPPGPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLV 358
Query: 367 NTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADE-IENVTLQP 425
NT V+GK+R+A+NGVS+ + ETPLK AEY+G+ ++VFKY+ I+D P E I+++ + P
Sbjct: 359 NTQGKVDGKLRYALNGVSHTDPETPLKLAEYFGVADKVFKYDSITDNPTPEQIKSIKIVP 418
Query: 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYT 485
NV++ T++ F+E+V EN + ++QSW LDGY+FFAV +EPGTW P+KRK+YNL+DAVSR+T
Sbjct: 419 NVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHT 478
Query: 486 IQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALL 545
+QV+P CWAAIL++ DN GMWN+RS ER YLGQQLY SV ++SLRDEYNMP+ +L
Sbjct: 479 VQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMPETSLQ 538
Query: 546 CGIVANMSKPTPYS 559
CG+V KP PY+
Sbjct: 539 CGLVKGTPKPNPYA 552
|
|
| TAIR|locus:2193899 sks14 "SKU5 similar 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1923 (682.0 bits), Expect = 1.2e-198, P = 1.2e-198
Identities = 352/555 (63%), Positives = 436/555 (78%)
Query: 5 RLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINST 64
RL+ +L+C ++ T +V AG P FF TWNVTYGT SPLG+PQ+ ILINGQFPGPN+NST
Sbjct: 4 RLLTVLVCLVS--TVAIVNAGDPYFFHTWNVTYGTASPLGVPQKVILINGQFPGPNLNST 61
Query: 65 TNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGS 124
+N+N+VINVFN LDEPFLLTW GIQH+KN WQDGV GT+CPIP G+N+TY+ Q KDQIGS
Sbjct: 62 SNNNVVINVFNHLDEPFLLTWSGIQHRKNCWQDGVAGTSCPIPAGQNFTYHFQPKDQIGS 121
Query: 125 YIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDS 184
Y Y+P+T HR AGGFGGL ++SR ++PVPY EDD+T+L+GDWYT H L LDS
Sbjct: 122 YFYYPTTSLHRFAGGFGGLRVNSRLLIPVPYAD-PEDDYTVLLGDWYTAGHTALKNFLDS 180
Query: 185 GKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQG 244
G+ LG P+GVLINGKSG++ G NEPLFTMK GK YKYR+CNVG K++LNFRIQ
Sbjct: 181 GRTLGLPNGVLINGKSGKVG------GKNEPLFTMKPGKTYKYRLCNVGFKSTLNFRIQN 234
Query: 245 HTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXXXXX 304
H MKLVEMEGSHV+QN+Y+SLDVHVGQCF+VLVTANQ KDYY++AS
Sbjct: 235 HKMKLVEMEGSHVIQNDYDSLDVHVGQCFSVLVTANQAAKDYYMVASTRFLKKELSTVGV 294
Query: 305 XXYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIR 364
Y S AS +LPKAPVGW WSLNQFRSFRWNLT++AARPNPQGS+HYG I I R+I+
Sbjct: 295 IRYEGSNVQASTELPKAPVGWAWSLNQFRSFRWNLTSNAARPNPQGSYHYGKINITRSIK 354
Query: 365 LANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQ 424
L N+ +V+GKVRF NGVS+V++ETPLK AEY+ + E+VFKYNVI D+PA +I +T+Q
Sbjct: 355 LVNSKSVVDGKVRFGFNGVSHVDTETPLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQ 414
Query: 425 PNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRY 484
PNV++ T++ F+EI+ EN + TMQS+ LDGY+FFAV EPG W P+KR++YNL+DAVSR+
Sbjct: 415 PNVLNITFRTFVEIIFENHEKTMQSFHLDGYSFFAVASEPGRWTPEKRENYNLLDAVSRH 474
Query: 485 TIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNAL 544
T+QV+P W+AIL++ DNAGMWN+RS ER YLG+QLY+SV ++SLRDEYN+P N
Sbjct: 475 TVQVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTN 534
Query: 545 LCGIVANMSKPTPYS 559
LCGIV + P YS
Sbjct: 535 LCGIVKGLPLPAHYS 549
|
|
| TAIR|locus:2201133 sks7 "SKU5 similar 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1515 (538.4 bits), Expect = 2.1e-155, P = 2.1e-155
Identities = 299/544 (54%), Positives = 375/544 (68%)
Query: 4 TRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINS 63
TR M+ + FL + L A P FF W+VTYG ISPLG+ QQGILING+FPGP+I S
Sbjct: 8 TRAMITTLLFLIS----LAFAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIIS 63
Query: 64 TTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG 123
TNDNL+INVFN LDEPFLL+W GI++ KNS+QDGV GT CPIPPGKNYTY LQVKDQIG
Sbjct: 64 ITNDNLIINVFNHLDEPFLLSWNGIRNWKNSFQDGVYGTMCPIPPGKNYTYALQVKDQIG 123
Query: 124 SYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLD 183
S+ Y PS GFH+AAGGFGG+ I SR+++PVP+ DD+TLL+GDWY +H +L QLD
Sbjct: 124 SFYYFPSLGFHKAAGGFGGIRISSRALIPVPFPT-PADDYTLLVGDWYKTNHKDLKAQLD 182
Query: 184 SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQ 243
+G L PDG+LING+S S + EP GK Y+ RI NVG++ SLNFRIQ
Sbjct: 183 NGGKLPLPDGILINGRS------SGATLNIEP------GKTYRLRISNVGLQNSLNFRIQ 230
Query: 244 GHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXXXX 303
HTMKLVE+EG + +QN + SLDVHVGQ ++VL+TA+Q KDYY++ S
Sbjct: 231 NHTMKLVEVEGRYTIQNLFSSLDVHVGQSYSVLITADQPAKDYYVVVSSRFTSKILTTTG 290
Query: 304 XXXYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTI 363
YS+S S +P P+ WS NQ R+ R NLTAS RPNPQGS+ YG I I RTI
Sbjct: 291 VLHYSNSVAPVSGPIPDGPIKLSWSFNQARAIRTNLTASGPRPNPQGSYRYGVINITRTI 350
Query: 364 RLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTL 423
RLAN + GK R+AVN S+ ++TPLK +Y+ I + V+K ISD+P + T
Sbjct: 351 RLANNLGHIEGKQRYAVNSASFYPADTPLKLVDYFKI-DGVYKPGSISDQPTNGAIFPTT 409
Query: 424 QPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSR 483
+VM A ++AF+E++ EN ++ +QSW LDGY+F+ VGME G W+P RK YNL DA+ R
Sbjct: 410 --SVMQADFRAFVEVIFENSEDIVQSWHLDGYSFYVVGMELGKWSPASRKVYNLNDAILR 467
Query: 484 YTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNA 543
TIQV+P W AI +++DN GMWN+RS IWER YLGQQ Y+ V SLRDEY +P NA
Sbjct: 468 CTIQVYPRSWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTTSTSLRDEYLIPKNA 527
Query: 544 LLCG 547
LLCG
Sbjct: 528 LLCG 531
|
|
| TAIR|locus:2174954 sks17 "SKU5 similar 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1514 (538.0 bits), Expect = 2.7e-155, P = 2.7e-155
Identities = 293/542 (54%), Positives = 373/542 (68%)
Query: 8 MLLICFLAAATSGLVEAG-SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTN 66
+LL+ L +S ++ G SP F+TW VTYG ISPLG+PQQ ILINGQFPGP + TN
Sbjct: 15 LLLLGALTLLSSLVIVKGESPYKFYTWTVTYGIISPLGVPQQVILINGQFPGPKLEVVTN 74
Query: 67 DNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYI 126
DN+++N+ NKLD+PFLLTW GI+ +KNSWQDGVLGTNCPI P N+TY Q KDQIG++
Sbjct: 75 DNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIQPNSNFTYKFQTKDQIGTFN 134
Query: 127 YHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGK 186
Y PST FH+AAGGFG + +++R +P+PY DFTLL+GDW+ +H L ++LDSG
Sbjct: 135 YFPSTAFHKAAGGFGAINVYARPGIPIPYP-LPTADFTLLVGDWFKTNHKTLQQRLDSGG 193
Query: 187 LLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHT 246
+L PDG+LING++ S GD GK Y RI NVG+ ++ NFRIQGHT
Sbjct: 194 VLPFPDGMLINGQT-----QSTFSGDQ--------GKTYMLRISNVGLSSTFNFRIQGHT 240
Query: 247 MKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXXXXXXX 306
MK+VE+EGSHV+Q +Y+SLD+HVGQ VLVT NQ PKDYY++AS
Sbjct: 241 MKVVEVEGSHVIQTDYDSLDIHVGQSLAVLVTLNQSPKDYYIVASTRFIRSKLSVMGLLR 300
Query: 307 YSDSKGLASPDLPKAPVG-WDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRL 365
YS+S+ AS D P P G WS+ Q R+FRWNLTA+AARPNPQGSFHYG I +T
Sbjct: 301 YSNSRVPASGDPPALPPGELVWSMRQARTFRWNLTANAARPNPQGSFHYGMISPTKTFVF 360
Query: 366 ANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQP 425
+N+A L+NGK R+AVNGVSYV SETPLK A+++GI VF N I P++ T+
Sbjct: 361 SNSAPLINGKQRYAVNGVSYVKSETPLKLADHFGI-SGVFSTNAIQSVPSNSPP--TVAT 417
Query: 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYT 485
+V+ ++ F+EIV +N + +MQSW LDGY F+ VG G W P KR +NL+DA++R+T
Sbjct: 418 SVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNLVDALTRHT 477
Query: 486 IQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALL 545
QV+P W ILVS+DN GMWN+RS IWER Y GQQ YL V +SL +EYN PDN L
Sbjct: 478 TQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEYNPPDNLQL 537
Query: 546 CG 547
CG
Sbjct: 538 CG 539
|
|
| TAIR|locus:2199798 sks5 "SKU5 similar 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1503 (534.1 bits), Expect = 4.0e-154, P = 4.0e-154
Identities = 293/542 (54%), Positives = 374/542 (69%)
Query: 13 FLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVIN 72
F+ + V A P FF WN+TYG I PLG+ QQGILING FPGP+I+S TNDNL+IN
Sbjct: 12 FIGLSLLFAVTAEDPYRFFEWNITYGDIYPLGVRQQGILINGAFPGPDIHSVTNDNLIIN 71
Query: 73 VFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132
V+N LDEPFLL+W GIQ ++NS+ DGV GT CPIPPGKNYTY LQ+KDQIGS+ Y PS G
Sbjct: 72 VYNSLDEPFLLSWNGIQQRRNSFVDGVYGTTCPIPPGKNYTYILQMKDQIGSFYYFPSLG 131
Query: 133 FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPD 192
FH+AAGGFGG+ I SR +PVP+ D T+LIGDWY +H +L QLD+GK L PD
Sbjct: 132 FHKAAGGFGGIRILSRPRIPVPFPD-PAGDTTVLIGDWYKANHTDLRAQLDNGKKLPLPD 190
Query: 193 GVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEM 252
G+LING+S G N ++ GK Y++RI NVG++ SLNFRIQ H MK+VE+
Sbjct: 191 GILINGRSS-------GATLN-----VEQGKTYRFRISNVGLQDSLNFRIQDHKMKVVEV 238
Query: 253 EGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXXXXXXXYSDSKG 312
EG+H +Q + SLDVHVGQ ++VLVTA+Q P+DYY++ S YS+S G
Sbjct: 239 EGTHTLQTTFSSLDVHVGQSYSVLVTADQTPRDYYVVVSSRFTSNVLTTTGIFRYSNSAG 298
Query: 313 LASPDLPKAP-VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHL 371
S +P P + DWSLNQ R+ R NL+AS RPNPQGS+HYG I RTIRLA++A
Sbjct: 299 GVSGPIPGGPTIQIDWSLNQARAIRTNLSASGPRPNPQGSYHYGMINTTRTIRLASSAGQ 358
Query: 372 VNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDAT 431
V+GK R+AVN VS+ ++TPLK A+Y+ I + V++ I +P + L +VM
Sbjct: 359 VDGKQRYAVNSVSFKPADTPLKIADYFKI-DGVYRSGSIQYQPTGG--GIYLDTSVMQVD 415
Query: 432 YKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPN 491
Y+ F+EI+ EN ++ +QSW LDGY+F+ VGM+ G W+PD R YNL DAV+R T+QV+P+
Sbjct: 416 YRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRNEYNLRDAVARCTVQVYPS 475
Query: 492 CWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVAN 551
W AIL+++DN GMWNLRS W R YLGQQLYL V SLRDEY +P NALLCG +
Sbjct: 476 SWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALLCGRASG 535
Query: 552 MS 553
S
Sbjct: 536 RS 537
|
|
| TAIR|locus:2036911 sks8 "SKU5 similar 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1489 (529.2 bits), Expect = 1.2e-152, P = 1.2e-152
Identities = 297/557 (53%), Positives = 375/557 (67%)
Query: 2 VATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNI 61
V T M+L + FL + V A P FF W+VTYG ISPL + QQGILING+FPGP+I
Sbjct: 6 VNTTAMILGLFFLIS----FVAAEDPYKFFEWHVTYGNISPLKVAQQGILINGKFPGPDI 61
Query: 62 NSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121
+ TNDNL+INVFN LDEPFL++W GI++ +NS+QDGV GT CPIPPGKNYTY LQVKDQ
Sbjct: 62 AAVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQ 121
Query: 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181
IGS+ Y PS GFH+AAGGFG + I SR +PVP+ D+T+LIGDWY +H +L Q
Sbjct: 122 IGSFYYFPSLGFHKAAGGFGAIRISSRPRIPVPFPA-PAGDYTVLIGDWYKTNHKDLRAQ 180
Query: 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241
LD+G L PDG+LING+ G G ++ GK Y+ RI NVG++ SLNFR
Sbjct: 181 LDNGGKLPFPDGILINGR---------GSGAT---LNIEPGKTYRLRISNVGLQNSLNFR 228
Query: 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXX 301
IQ H MKLVE+EG+H +Q + SLDVHVGQ ++VL+TA+Q KDYY++ S
Sbjct: 229 IQNHKMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILIT 288
Query: 302 XXXXXYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
YS+S G S +P+AP+ WS +Q R+ + NL AS RPNPQG++HYG I + R
Sbjct: 289 AGVLHYSNSAGPVSGPIPEAPIQLRWSFDQARAIKTNLAASGPRPNPQGTYHYGKIKVTR 348
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPAD-EIEN 420
TI+LA++A +NGK R+AVN S+ ++TPLK A+Y+ I V+ I D+P I
Sbjct: 349 TIKLASSAGNINGKQRYAVNSASFYPTDTPLKLADYFKIAG-VYNPGSIPDQPTHGAIYP 407
Query: 421 VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDA 480
VT +VM YKAF+EIV EN ++ +Q+W LDGY+FF VGME G W+ RK YNL DA
Sbjct: 408 VT---SVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFFVVGMELGKWSAASRKVYNLNDA 464
Query: 481 VSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP 540
VSR T+QV+P W AI VS+DN GMWNLRS +WER YLGQQ Y+ V SLRDEY +P
Sbjct: 465 VSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPSTSLRDEYLIP 524
Query: 541 DNALLCGIVANMSKPTP 557
NALLCG TP
Sbjct: 525 KNALLCGRATGHHTTTP 541
|
|
| TAIR|locus:2120648 sks4 "SKU5 similar 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 291/539 (53%), Positives = 370/539 (68%)
Query: 11 ICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLV 70
I L +G++ +P FFTW +TYG I PLG+ QQGILINGQFPGP+I++ TNDN++
Sbjct: 9 IVLLLVLINGVL-GDNPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPHIDAITNDNII 67
Query: 71 INVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPS 130
I+VFN L EPFL++W G+Q +KNSWQDGV+GT CPIPPGKN+TY +QVKDQIGS+ Y PS
Sbjct: 68 ISVFNYLKEPFLISWNGVQQRKNSWQDGVVGTTCPIPPGKNFTYVIQVKDQIGSFYYFPS 127
Query: 131 TGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGK 190
FH+AAG FG + + SR +PVP++ + DF LL GDWY +H L + L++G+ L
Sbjct: 128 LAFHKAAGAFGAIRVWSRPRIPVPFSP-PDGDFWLLAGDWYKTNHYVLRRLLEAGRNLPN 186
Query: 191 PDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLV 250
PDGVLING+ G G N FT++ GK Y++RI NVGV TSLNFRIQGHTMKLV
Sbjct: 187 PDGVLINGR---------GWGGNT--FTVQPGKTYRFRISNVGVATSLNFRIQGHTMKLV 235
Query: 251 EMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXXXXXXXYSDS 310
E+EGSH VQN Y SLD+H+GQ ++VLVTANQ P+DYY++ S YS+S
Sbjct: 236 EVEGSHTVQNIYTSLDIHLGQSYSVLVTANQAPQDYYIVISSRFTRKVLTTTSILHYSNS 295
Query: 311 -KGLASPDLPKAP-VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANT 368
KG++ P +P P + SL Q R+ R NLTAS RPNPQGS+HYG I RTI LAN+
Sbjct: 296 RKGVSGP-VPNGPTLDIASSLYQARTIRRNLTASGPRPNPQGSYHYGLIKPGRTIILANS 354
Query: 369 AHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVM 428
A +NGK R+AVNG S+V +TPLK A+Y+ IP VF I P+ LQ +VM
Sbjct: 355 APWINGKQRYAVNGASFVAPDTPLKLADYFKIPG-VFNLGSIPTSPSGG-NGGYLQSSVM 412
Query: 429 DATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQV 488
A ++ F+E+V +N +N++QSW + GY+FF VGM+ G W P R YNL DAVSR T+QV
Sbjct: 413 AANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRSTVQV 472
Query: 489 FPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCG 547
+P W AI +++DN GMWN+RS W R YLGQQ YL V S RDEY P NAL+CG
Sbjct: 473 YPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALMCG 531
|
|
| TAIR|locus:2033513 SKS6 "SKU5-similar 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1468 (521.8 bits), Expect = 2.0e-150, P = 2.0e-150
Identities = 289/543 (53%), Positives = 368/543 (67%)
Query: 8 MLLIC--FLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTT 65
+LL C F AA T A SP FF WNVTYG I PLG+ QQGILINGQFPGP+I+S T
Sbjct: 11 ILLFCLSFFAAVT-----AESPYRFFDWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVT 65
Query: 66 NDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSY 125
NDNL+INV N LDEPFL++W G+Q+++NS+ DG+ GT CPIPP NYTY LQVKDQIGS+
Sbjct: 66 NDNLIINVHNSLDEPFLISWNGVQNRRNSYVDGMYGTTCPIPPRSNYTYILQVKDQIGSF 125
Query: 126 IYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG 185
Y PS FH+AAGGFGG+ I SR +PVP+ D+T+LIGDWY +H +L +LD G
Sbjct: 126 YYFPSLAFHKAAGGFGGIRILSRPGIPVPFAD-PAGDYTVLIGDWYKFNHTDLKSRLDRG 184
Query: 186 KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGH 245
+ L PDG+LING+S N ++ GK Y+ RI NVG++ SLNFRIQ H
Sbjct: 185 RKLPSPDGILINGRS------------NGATLNVEQGKTYRLRISNVGLQDSLNFRIQNH 232
Query: 246 TMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASXXXXXXXXXXXXXX 305
MKLVE+EG+H +Q + SLDVHVGQ ++VL+TA+Q P+DYY++ S
Sbjct: 233 RMKLVEVEGTHTLQTMFSSLDVHVGQSYSVLITADQSPRDYYVVVSSRFTDKIITTTGVL 292
Query: 306 XYSDSKGLASPDLPKAP-VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIR 364
YS S AS +P P + DWSLNQ R+ R NLTAS RPNPQGS+HYG IP+ RTI
Sbjct: 293 RYSGSSTPASGPIPGGPTIQVDWSLNQARAIRTNLTASGPRPNPQGSYHYGLIPLIRTIV 352
Query: 365 LANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQ 424
++A +NGK R+ VN VS+V ++TPLK A+++ I V+K N ISDKP + L
Sbjct: 353 FGSSAGQINGKQRYGVNSVSFVPADTPLKLADFFKI-SGVYKINSISDKPT--YGGLYLD 409
Query: 425 PNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRY 484
+V+ Y+ F+EIV EN+++ +QS+ L+GY+F+ VGM+ G W R YNL DAVSR
Sbjct: 410 TSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGYNLRDAVSRS 469
Query: 485 TIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNAL 544
T+QV+P W AI +++DN GMWNLRS W R YLGQQLYL V SLRDEY +P N+
Sbjct: 470 TVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSR 529
Query: 545 LCG 547
LCG
Sbjct: 530 LCG 532
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P29162 | ASOL_TOBAC | 1, ., 1, 0, ., 3, ., - | 0.5798 | 0.9643 | 0.9765 | N/A | no |
| Q00624 | ASOL_BRANA | 1, ., 1, 0, ., 3, ., - | 0.6598 | 0.9376 | 0.9477 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.10.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 561 | |||
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 0.0 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 0.0 | |
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 0.0 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 0.0 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 0.0 | |
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 1e-177 | |
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 6e-67 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 3e-58 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 1e-53 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 1e-47 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 5e-46 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 2e-44 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 9e-35 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 2e-23 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 3e-18 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 7e-15 | |
| PRK10883 | 471 | PRK10883, PRK10883, FtsI repressor; Provisional | 3e-04 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 960 bits (2483), Expect = 0.0
Identities = 389/559 (69%), Positives = 467/559 (83%), Gaps = 8/559 (1%)
Query: 1 MVATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPN 60
M+ RL+ +L+C LAAA + +V A P FFFTWNVTYGT SPLG+PQQ ILINGQFPGPN
Sbjct: 1 MMGGRLLAVLLC-LAAAVALVVRAEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPN 59
Query: 61 INSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKD 120
INST+N+N+VINVFN LDEPFLLTW GIQ +KNSWQDGV GTNCPIPPG N+TY+ Q KD
Sbjct: 60 INSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKD 119
Query: 121 QIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGK 180
QIGSY Y+PSTG HRAAGGFGGL ++SR ++PVPY EDD+T+LIGDWYT+SH L K
Sbjct: 120 QIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYAD-PEDDYTVLIGDWYTKSHTALKK 178
Query: 181 QLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNF 240
LDSG+ LG+PDGVLINGKSG+ D G +EPLFTMK GK Y+YRICNVG+K+SLNF
Sbjct: 179 FLDSGRTLGRPDGVLINGKSGKGD------GKDEPLFTMKPGKTYRYRICNVGLKSSLNF 232
Query: 241 RIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVIT 300
RIQGH MKLVEMEGSHV+QN+Y+SLDVHVGQCF+VLVTANQ PKDYY++ASTRF + V+T
Sbjct: 233 RIQGHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVASTRFLKKVLT 292
Query: 301 TTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPIN 360
TT I+RY KG ASP+LP+APVGW WSLNQFRSFRWNLTASAARPNPQGS+HYG I I
Sbjct: 293 TTGIIRYEGGKGPASPELPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINIT 352
Query: 361 RTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIEN 420
RTI+L N+A V+GK+R+A+NGVS+V+ ETPLK AEY+G+ ++VFKY+ I D P +I
Sbjct: 353 RTIKLVNSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNPPAKITK 412
Query: 421 VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDA 480
+ +QPNV++ T++ F+EI+ EN + +MQSW LDGY+FFAV +EPGTW P+KRK+YNL+DA
Sbjct: 413 IKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDA 472
Query: 481 VSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP 540
VSR+T+QV+P WAAIL++ DNAGMWN+RS WER YLGQQLY SV +RSLRDEYNMP
Sbjct: 473 VSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMP 532
Query: 541 DNALLCGIVANMSKPTPYS 559
+NALLCG V + KP PYS
Sbjct: 533 ENALLCGKVKGLPKPPPYS 551
|
Length = 552 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 693 bits (1790), Expect = 0.0
Identities = 317/546 (58%), Positives = 392/546 (71%), Gaps = 18/546 (3%)
Query: 3 ATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNIN 62
A L +LL ++ LV P ++TW VTYGTISPLG+PQQ ILINGQFPGP ++
Sbjct: 4 AVNLHLLLGVLAVLSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLD 63
Query: 63 STTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQI 122
TNDN+++N+ NKLD+PFLLTW GI+ +KNSWQDGVLGTNCPIPP NYTY Q KDQI
Sbjct: 64 VVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQI 123
Query: 123 GSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQL 182
G++ Y PST FH+AAGGFG + ++ R +P+P+ + DFTLL+GDWY SH L ++L
Sbjct: 124 GTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFP-LPDGDFTLLVGDWYKTSHKTLQQRL 182
Query: 183 DSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI 242
DSGK+L PDGVLING++ + F+ GK Y +RI NVG+ TSLNFRI
Sbjct: 183 DSGKVLPFPDGVLINGQT-------------QSTFSGDQGKTYMFRISNVGLSTSLNFRI 229
Query: 243 QGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTT 302
QGHTMKLVE+EGSH +QN Y+SLDVHVGQ VLVT NQ PKDYY++ASTRFTR ++T T
Sbjct: 230 QGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTAT 289
Query: 303 AIVRYSDSKGLASPDLPKAPVG-WDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
A++ YS+S+ AS LP P G WS+ Q R++RWNLTASAARPNPQGSFHYG I +
Sbjct: 290 AVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTK 349
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENV 421
TI LAN+A L+NGK R+AVNGVSYVNS+TPLK A+Y+GIP VF N I P+
Sbjct: 350 TIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIP-GVFSVNSIQSLPSG--GPA 406
Query: 422 TLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV 481
+ +VM + F+E+V +N + TMQSW LDGY F+ VG G W P KR YNL+DA+
Sbjct: 407 FVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDAL 466
Query: 482 SRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPD 541
+R+T QV+P W ILVS+DN GMWN+RS IWER YLGQQ YL V SL +EY++PD
Sbjct: 467 TRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPD 526
Query: 542 NALLCG 547
NALLCG
Sbjct: 527 NALLCG 532
|
Length = 539 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 630 bits (1627), Expect = 0.0
Identities = 309/557 (55%), Positives = 388/557 (69%), Gaps = 22/557 (3%)
Query: 2 VATRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNI 61
V T M+L + FL + V A P FF W+VTYG ISPLG+ QQGILING+FPGP+I
Sbjct: 6 VNTTAMILGLLFLIS----FVAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDI 61
Query: 62 NSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121
S TNDNL+INVFN LDEPFL++W GI++ +NS+QDGV GT CPIPPGKNYTY LQVKDQ
Sbjct: 62 ISVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQ 121
Query: 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181
IGS+ Y PS GFH+AAGGFG + I SR ++PVP+ DD+T+LIGDWY +H +L Q
Sbjct: 122 IGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPA-PADDYTVLIGDWYKTNHKDLRAQ 180
Query: 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241
LD+G L PDG+LING+ S + EP GK Y+ RI NVG++ SLNFR
Sbjct: 181 LDNGGKLPLPDGILINGRG------SGATLNIEP------GKTYRLRISNVGLQNSLNFR 228
Query: 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITT 301
IQ HTMKLVE+EG+H +Q + SLDVHVGQ ++VL+TA+Q KDYY++ S+RFT ++ T
Sbjct: 229 IQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILIT 288
Query: 302 TAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINR 361
T ++ YS+S G S +P P+ WS +Q R+ + NLTAS RPNPQGS+HYG I I R
Sbjct: 289 TGVLHYSNSAGPVSGPIPDGPIQLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITR 348
Query: 362 TIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPAD-EIEN 420
TIRLAN+A + GK R+AVN S+ ++TPLK A+Y+ I V+ I D+P + I
Sbjct: 349 TIRLANSAGNIEGKQRYAVNSASFYPADTPLKLADYFKI-AGVYNPGSIPDQPTNGAIFP 407
Query: 421 VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDA 480
VT +VM YKAF+EIV EN ++ +Q+W LDGY+F+ VGME G W+ RK YNL DA
Sbjct: 408 VT---SVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDA 464
Query: 481 VSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP 540
VSR T+QV+P W AI VS+DN GMWNLRS +WER YLGQQ Y+ V SLRDEY +P
Sbjct: 465 VSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIP 524
Query: 541 DNALLCGIVANMSKPTP 557
NALLCG TP
Sbjct: 525 KNALLCGRATGHHTTTP 541
|
Length = 543 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 598 bits (1542), Expect = 0.0
Identities = 282/548 (51%), Positives = 362/548 (66%), Gaps = 18/548 (3%)
Query: 14 LAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINV 73
+ V+A F+ W VTYG IS L +P++GILINGQFPGP I S TNDNLVINV
Sbjct: 3 MTTTIISFVKADDT-LFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINV 61
Query: 74 FNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGF 133
N LDEPFLL+W G+ +KNS+QDGV GT CPIPPGKNYTY QVKDQ+GSY Y PS
Sbjct: 62 HNDLDEPFLLSWNGVHMRKNSYQDGVYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAV 121
Query: 134 HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG-KLLGKPD 192
+AAGG+G L I+S +PVP+ DFT LIGDWY R+H L K LD G KL PD
Sbjct: 122 QKAAGGYGSLRIYSLPRIPVPFPEPAG-DFTFLIGDWYRRNHTTLKKILDGGRKLPLMPD 180
Query: 193 GVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEM 252
GV+ING+ Y T+ GK Y++RI NVG++TSLNF I GH +KL+E+
Sbjct: 181 GVMINGQGVSYVYS----------ITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEV 230
Query: 253 EGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKG 312
EG+H VQ+ Y SLD+HVGQ ++VLVT +Q P++Y ++ STRF + ++ + YS+SKG
Sbjct: 231 EGTHTVQSMYTSLDIHVGQTYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSKG 290
Query: 313 LAS-PDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHL 371
P +WS+ Q +S R NLTAS R NPQGS+HYG + I+RT+ L ++A L
Sbjct: 291 HKIIHARQPDPDDLEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAAL 350
Query: 372 VNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDAT 431
V K R+A+NGVS+V S+TPLK A+++ I + VFK I DKP + L +VM A
Sbjct: 351 VKRKQRYAINGVSFVPSDTPLKLADHFKI-KGVFKVGSIPDKPRRG-GGMRLDTSVMGAH 408
Query: 432 YKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPN 491
+ AF+EI+ +NR+ +QS+ LDGY F+ VG+ G W+ R+ YNL DA+SR T QV+P
Sbjct: 409 HNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPE 468
Query: 492 CWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVAN 551
W A+ V++DN GMWNLRS W R YLGQQ YL V SL+DEY +P NALLCG +N
Sbjct: 469 SWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASN 528
Query: 552 --MSKPTP 557
MS TP
Sbjct: 529 KNMSIITP 536
|
Length = 536 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 542 bits (1397), Expect = 0.0
Identities = 242/536 (45%), Positives = 334/536 (62%), Gaps = 27/536 (5%)
Query: 26 SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTW 85
+P + W V+Y LG +Q I+IN FPGP +N+T ND + +N+FN L EPFL+TW
Sbjct: 24 APIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTW 83
Query: 86 PGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCI 145
G+Q +KNSWQDGV GTNCPI PG N+TY QVKDQIGSY Y PS +AAGG+G + I
Sbjct: 84 NGLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRI 143
Query: 146 HSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDY 205
++ +VPVP+ + ++++ +LIGDW+ H + LD+G L PDG+L N
Sbjct: 144 YNPELVPVPFPK-PDEEYDILIGDWFYADHTVMRASLDNGHSLPNPDGILFN-------- 194
Query: 206 DSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESL 265
G+G E F + GK Y+ RI NVG+KT LNFRIQ H M LVE EG++V + Y SL
Sbjct: 195 ---GRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSL 251
Query: 266 DVHVGQCFTVLVTANQDP----KDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKA 321
D+HVGQ ++VLVTA DP + YY++A+ RFT + A++RY +S LP A
Sbjct: 252 DIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDAYLGGVALIRYPNSPLDPVGPLPLA 311
Query: 322 PVGWDW--SLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFA 379
P D+ S+ Q S R +L AAR NPQGS+HYG I + RTI L N L +GK+R+
Sbjct: 312 PALHDYFSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYT 371
Query: 380 VNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIV 439
+NGVS+V TPLK +++ + + + + P+++ TL +V+D YK F IV
Sbjct: 372 INGVSFVYPGTPLKLVDHFQLNDTI-IPGMFPVYPSNKTP--TLGTSVVDIHYKDFYHIV 428
Query: 440 LENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVS 499
+N +++S+ +DGY FF VG G W+ K+ YNL+DAVSR T+QV+P W AIL++
Sbjct: 429 FQNPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIA 488
Query: 500 MDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRS------LRDEYNMPDNALLCGIV 549
MDN GMWN+RS E+ YLGQ+LY+ V+ +RDE +P N + CG V
Sbjct: 489 MDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCGKV 544
|
Length = 545 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 512 bits (1319), Expect = e-177
Identities = 267/570 (46%), Positives = 359/570 (62%), Gaps = 19/570 (3%)
Query: 6 LMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLG--IPQQGILINGQFPGPNINS 63
L +LL+ A AG P ++ W V+Y + +PLG Q+ I INGQFPGP +N
Sbjct: 5 LFLLLLAAALALAPAPAGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNV 64
Query: 64 TTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG 123
TTN NLV+NV N LDEP LLTW G+Q +K++WQDGV GTNC IP G N+TY QVKDQ+G
Sbjct: 65 TTNWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVG 124
Query: 124 SYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLD 183
S+ Y PST HRAAGG+G + I++R V+P+P+ D TL I DWY R H L + LD
Sbjct: 125 SFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRALD 184
Query: 184 SGKLLGKPDGVLINGKSGRLDYDSD--GKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241
+G LLG PDGVLIN G Y+ G + GK Y++R+ NVGV TSLNFR
Sbjct: 185 AGDLLGAPDGVLINA-FGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFR 243
Query: 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPK-DYYLIASTRFTRTV-- 298
IQGH + LVE EGS+ Q Y +LD+HVGQ ++ L+T +Q+ DYY++AS RF
Sbjct: 244 IQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVV 303
Query: 299 --ITTTAIVRYSDSKGLASPDLPKAP---VGWDWSLNQFRSFRWNLTASAARPNPQGSFH 353
+T AI+ YS+S+G AS LP AP +S+NQ RS RWN+TAS ARPNPQGSFH
Sbjct: 304 DKLTGVAILHYSNSQGPASGPLPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFH 363
Query: 354 YGGIPINRTIRLANTA-HLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISD 412
YG I + L + A L++GK+R +N +SY+ TPL A+ + +P VFK + +
Sbjct: 364 YGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVP-GVFKLD-FPN 421
Query: 413 KPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKR 472
P + + + ++++ TYK FMEI+ +N +QS+ LDGYAFF VGM+ G W + R
Sbjct: 422 HPMNRLPKL--DTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSR 479
Query: 473 KSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLS-VRLHKR 531
+YN D V+R TIQVFP W AILV +DNAG+WNLR + YLGQ++Y++ V
Sbjct: 480 GTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDN 539
Query: 532 SLRDEYNMPDNALLCGIVANMSKPTPYSLQ 561
S + +PDNA+ CG ++++ K + Q
Sbjct: 540 SNKTVLPIPDNAIFCGALSSLQKEQSHRFQ 569
|
Length = 596 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 6e-67
Identities = 157/557 (28%), Positives = 253/557 (45%), Gaps = 61/557 (10%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQ 89
+ W V Y SP + I INGQFPGP I + D +V+ + NKL E ++ W GI+
Sbjct: 4 YKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIR 63
Query: 90 HKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSR 148
W DG G T C I PG+ + Y V D+ G+Y YH G R+AG +G L +
Sbjct: 64 QIGTPWADGTAGVTQCAINPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVP 122
Query: 149 SVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG--KLLGKPDGVLINGKSGRLDYD 206
P++ + +F LL+ DW+ +S E L S + +G+P +LING+ G+ +
Sbjct: 123 DGEKEPFH--YDGEFNLLLSDWWHKSIHEQEVGLSSKPMRWIGEPQSLLINGR-GQFNCS 179
Query: 207 SDGKGDNEPL---------------FTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVE 251
K + L ++ GK Y+ RI + +LNF I+GH + +VE
Sbjct: 180 LAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVE 239
Query: 252 MEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITT--TAIVRY-- 307
+G++V + +D++ G+ ++VL+T +QDP Y I+ R T ++ Y
Sbjct: 240 ADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLTVLNYYP 299
Query: 308 -SDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLA 366
S S+ +P P WD ++ ++F + A+ P P + R I L
Sbjct: 300 NSPSRLPPTP--PPVTPAWD-DFDRSKAFSLAIKAAMGSPKPPETSD-------RRIVLL 349
Query: 367 NTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGI--------PEEVFKYNVISDKPADEI 418
NT + +NG ++A+N VS TP + Y + P E + + KP
Sbjct: 350 NTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPN- 408
Query: 419 ENVTLQPNVMDATYKAFMEIVLENRQNTMQS-------WILDGYAFFAVGMEPGTWNPD- 470
N T + + ++++L+N NT+ W L G+ F+ +G G + P
Sbjct: 409 PNTTTGNGIYRLKFNTTVDVILQN-ANTLNGNNSETHPWHLHGHDFWVLGYGEGKFRPGV 467
Query: 471 KRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHK 530
KSYNL + R T+ +FP W A+ DN G+W +I ++G + + + K
Sbjct: 468 DEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEK 527
Query: 531 RSLRDEYNMPDNALLCG 547
+P AL CG
Sbjct: 528 VG-----KLPKEALGCG 539
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 3e-58
Identities = 154/584 (26%), Positives = 266/584 (45%), Gaps = 69/584 (11%)
Query: 6 LMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTT 65
++ ++ A++ + E +TW V Y P + +NGQFPGP I++
Sbjct: 8 IVTVVAVLTHTASAAVRE-------YTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVA 60
Query: 66 NDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIG 123
D +V+++ NKL E ++ W GI+ K + W DG G T C I PG+ +TY V ++ G
Sbjct: 61 GDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTV-EKPG 119
Query: 124 SYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVED-DFTLLIGDWYTRS--HVELGK 180
++ YH G R+AG +G L + V P R D +F LL+ DW+ S ELG
Sbjct: 120 THFYHGHYGMQRSAGLYGSLIV---DVAKGPKERLRYDGEFNLLLSDWWHESIPSQELGL 176
Query: 181 QLDSGKLLGKPDGVLINGKSGRLDYDSDG---KGDNEPLFTMKAG-------------KV 224
+ +G+ +LING+ G+ + G P+ T K G K
Sbjct: 177 SSKPMRWIGEAQSILINGR-GQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKT 235
Query: 225 YKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPK 284
Y+ R+ + SLN +QGH + +VE +G+++ + +D++ G+ ++VL+T +QDP
Sbjct: 236 YRIRLASTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPS 295
Query: 285 DYYLIASTRFTRTVITTTA--IVRYSDSKGLASPDLPKAPVGWDWS-LNQFRSFRWNLTA 341
Y I+ R TT A I+ Y + P P PV W + ++F + +
Sbjct: 296 QNYYISVGVRGRKPNTTQALTILNYVTAPASKLPSSP-PPVTPRWDDFERSKNFSKKIFS 354
Query: 342 SAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIP 401
+ P+P + + + L NT +L++G ++A+N VS V TP + Y +
Sbjct: 355 AMGSPSPPKKYR-------KRLILLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLK 407
Query: 402 ----------EEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ------N 445
Y++++ P N T + + ++++++N +
Sbjct: 408 LGFNRKSPPRSYRMDYDIMNPPP---FPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVS 464
Query: 446 TMQSWILDGYAFFAVGMEPGTWNPD-KRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504
+ W L G+ F+ +G G + P K+YNL + R T ++P W AI DN G
Sbjct: 465 EIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPG 524
Query: 505 MWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGI 548
+W +I ++G + + L++ +PD AL CG+
Sbjct: 525 VWFFHCHIEPHLHMGMGVVFAEGLNRIG-----KIPDEALGCGL 563
|
Length = 574 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 190 bits (485), Expect = 1e-53
Identities = 161/557 (28%), Positives = 256/557 (45%), Gaps = 62/557 (11%)
Query: 5 RLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINST 64
R + L + EA + W V Y SP + I ING+ PGP I +
Sbjct: 3 RFLALFFLLFSVLNFPAAEA--RIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQ 60
Query: 65 TNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQI 122
D +++ + N L E + W GI+ W DG G T CPI PG+ +TY V D+
Sbjct: 61 QGDTVIVELKNSLLTENVAIHWHGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVV-DRP 119
Query: 123 GSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQL 182
G+Y+YH G R AG +G + + P++ + D ++++ DWY +S E L
Sbjct: 120 GTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPFS--YDYDRSIILTDWYHKSTYEQALGL 177
Query: 183 DSG--KLLGKPDGVLINGKSGRLD--------YDSDGKGDNEP-----LFTMKAGKVYKY 227
S +G+P +LI GK GR + + P + T+ GK Y+
Sbjct: 178 SSIPFDWVGEPQSLLIQGK-GRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYRL 236
Query: 228 RICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYY 287
RI ++ ++L+F+I+GH M +VE +G +V ++L ++ G+ ++VLV A+QDP Y
Sbjct: 237 RISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNY 296
Query: 288 LIASTRFTR--TVITTTAIVRYSDSKGLASP-DLPKAPVGWDWS---LNQFRSFRWNLTA 341
+ ++ +R T AI Y + SP +P + W+ LNQ + +
Sbjct: 297 WVTTSVVSRNNTTPPGLAIFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLAIK----- 351
Query: 342 SAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGI- 400
AR G H + +R I L NT + VNG R++VN VS+ TP A +
Sbjct: 352 --AR---HGYIHPPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKENLT 406
Query: 401 --------PEEV-FKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQS-- 449
PE F I KP + N T ++ + + ++I+L+N NTM +
Sbjct: 407 GAFDQTPPPEGYDFANYDIYAKPNN--SNATSSDSIYRLQFNSTVDIILQN-ANTMNANN 463
Query: 450 -----WILDGYAFFAVGMEPGTWNP--DKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN 502
W L G+ F+ +G G +N D +K YNL+D + + T+ V P W A+ DN
Sbjct: 464 SETHPWHLHGHDFWVLGYGEGKFNMSSDPKK-YNLVDPIMKNTVPVHPYGWTALRFRADN 522
Query: 503 AGMWNLRSNIWERNYLG 519
G+W +I ++G
Sbjct: 523 PGVWAFHCHIESHFFMG 539
|
Length = 566 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 1e-47
Identities = 141/503 (28%), Positives = 231/503 (45%), Gaps = 36/503 (7%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQH 90
+T++V ++ L + + +NG+FPGP + + D +++NV N + + W G++
Sbjct: 6 YTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQ 65
Query: 91 KKNSWQDG-VLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRS 149
+N W DG T CPI PG++Y Y + Q G+ +H + RA +G + I +
Sbjct: 66 LRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRAT-VYGAIVILPKP 124
Query: 150 VVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ-LDSGKLLGKPDGVLINGKSGRLDYDSD 208
VP P+ + + + +++G+W+ + Q +G D ING G L S
Sbjct: 125 GVPYPFPK-PDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCS- 182
Query: 209 GKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVH 268
D L T++ GK Y RI N + L F I HT+ +VE++ ++ + +++ +
Sbjct: 183 -SKDTFKL-TVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240
Query: 269 VGQCFTVLVTANQDPKDYYLIASTRFTRTVI-----TTTAIVRYSDSKGLASPDLPKAPV 323
GQ VL+TA+Q P Y+ +A+ + TTTAI++Y + A P LP P
Sbjct: 241 PGQTTNVLLTADQSPGRYF-MAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPA 299
Query: 324 GWDWS-----LNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRF 378
D + N+ RS + A P + I + NT NG RF
Sbjct: 300 YNDTAAATNFSNKLRSLN-SAQYPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNGT-RF 357
Query: 379 A--VNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKP------ADEIENVTLQPN---V 427
A +N +S+V T L A Y+GI VF + ++ P + N N V
Sbjct: 358 AASMNNISFVMPTTALLQAHYFGIS-GVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKV 416
Query: 428 MDATYKAFMEIVLENRQN-TMQSWI--LDGYAFFAVGMEPGTWNPDKR-KSYNLIDAVSR 483
+ + + +E+VL++ ++ L GY FF VG G ++P K +NL+D R
Sbjct: 417 VRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPER 476
Query: 484 YTIQVFPNCWAAILVSMDNAGMW 506
T+ V WAAI DN G+W
Sbjct: 477 NTVGVPTGGWAAIRFVADNPGVW 499
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 5e-46
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 34 NVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKN 93
VTYGT++PLG +Q I +NGQFPGP I D +V+NV N LDEP + W G++
Sbjct: 1 TVTYGTVTPLGGTRQVIGVNGQFPGPTIRVREGDTVVVNVTNNLDEPTTIHWHGLRQPGT 60
Query: 94 SWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR-AAGGFGGLCIHSRS 149
W DGV G T CPIPPG+++TY VK Q G+Y YH T + + AAG +G + I +
Sbjct: 61 PWADGVPGVTQCPIPPGESFTYRFTVKQQAGTYWYHSHTSWLQQAAGLYGAIIIEDPA 118
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 153 bits (390), Expect = 2e-44
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 16/154 (10%)
Query: 161 DDFTLLIGDWYTRSHVELGKQLD-----SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEP 215
+D+ + + DWY + +L K+L PD VLINGK G +
Sbjct: 1 EDYVITLSDWYHKDAKDLEKELLASGKAPTDFPPVPDAVLINGKDGA----------SLA 50
Query: 216 LFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTV 275
T+ GK Y+ RI NV + SLNF I+GH M +VE++G +V +SLD+ GQ ++V
Sbjct: 51 TLTVTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYSV 110
Query: 276 LVTANQDPKDYYLIASTRFTR-TVITTTAIVRYS 308
LVTANQDP +Y+++AS T AI+RYS
Sbjct: 111 LVTANQDPGNYWIVASPNIPAFDNGTAAAILRYS 144
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 9e-35
Identities = 126/531 (23%), Positives = 210/531 (39%), Gaps = 85/531 (16%)
Query: 46 PQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGV-LGTN 103
+ +++NG PGP I I V+N + D + W G+ + + DG L +
Sbjct: 26 SRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQ 85
Query: 104 CPIPPGKNYTYYLQVK-DQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDD 162
PIPPG + Y ++ + GSY YH GF +A FG L + P PY +D+
Sbjct: 86 WPIPPGHFFDYEIKPEPGDAGSYFYHSHVGF-QAVTAFGPLIV--EDCEPPPY--KYDDE 140
Query: 163 FTLLIGDWYTRS--HVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNE---PLF 217
LL+ D+++ + +E G G+ + VL+NGKSG + + P+
Sbjct: 141 RILLVSDFFSATDEEIEQGLLSTPFTWSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVI 200
Query: 218 TMKAGKVYKYRICNVGVKTSLNFRIQGH-TMKLVEMEGSHVVQNEYESLDVHVGQCFTVL 276
++ GK Y+ R + ++ I+ H + ++E +GS+ + + L + GQ ++VL
Sbjct: 201 DVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPAKIDHLQLGGGQRYSVL 260
Query: 277 VTA-------NQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPV------ 323
A D + Y++ TR V A++RY K P +P+ P
Sbjct: 261 FKAKTEDELCGGDKRQYFIQFETRDRPKVYRGYAVLRYRSDKASKLPSVPETPPLPLPNS 320
Query: 324 GWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLAN-TAHLVNGKVRFAVNG 382
+DW + L + N F R + A+ +NG+V + NG
Sbjct: 321 TYDW-------LEYELEPLSEENNQ--DFPTLDEVTRRVVIDAHQNVDPLNGRVAWLQNG 371
Query: 383 VSYVNS--ETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAF----- 435
+S+ S +TP Y PA L D +AF
Sbjct: 372 LSWTESVRQTPYLVDIYEN------------GLPATPNYTAALANYGFDPETRAFPAKVG 419
Query: 436 --MEIVLENR-QNTMQSWILD-------GYAFFAVGMEPGTWN------------PDKRK 473
+EIV +N T + +D G F+ +G G +N P R
Sbjct: 420 EVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEAKLENYTPVLRD 479
Query: 474 SYNLIDAVSRYTIQVFPNC---WAAILVSMDNAGMWNLRSNIWERNYLGQQ 521
+ L RY ++V P W A + + N G+W + +I + +G Q
Sbjct: 480 TTMLY----RYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQ 526
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 2e-23
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 9/139 (6%)
Query: 389 ETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQ 448
+TP K I + N D V+ +EIVL+N
Sbjct: 1 DTPPKLPTLLQITGGNDRANWSPD-----NGPPLGTTEVITLPNGDRVEIVLQNNTMGPH 55
Query: 449 SWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNL 508
+ L G++F +G G W P +YNL+D V R T+QV P W AI DN G W
Sbjct: 56 PFHLHGHSFQVLGRGGGPWTPTA--TYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLF 113
Query: 509 RSNIWERNYLGQQLYLSVR 527
+I +L Q +
Sbjct: 114 HCHILW--HLDQGMMGQFV 130
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 3e-18
Identities = 59/264 (22%), Positives = 91/264 (34%), Gaps = 25/264 (9%)
Query: 20 GLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE 79
+ TF G G NG PGP I D + +++ N+L
Sbjct: 27 TRAGGMARTFLTAQRAQLAFAPGTGATVWGY--NGALPGPTIRVKKGDTVTLDLTNRLLV 84
Query: 80 PFLLTWPGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAG 138
+ W G+ DGV T P PG+ TY D G+Y YHP T G
Sbjct: 85 DTSVHWHGLP--VPGEMDGVPPLTQIPPGPGETPTYTFTQ-DVPGTYWYHPHTHGQVYDG 141
Query: 139 GFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLING 198
G L I + P+ DD +++ LD +G + G
Sbjct: 142 LAGALIIEDENSEPLGV-----DDEPVIL----------QDDWLDEDGTDLYQEGPAMGG 186
Query: 199 KSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV 258
G G P F G V + R+ N G + + + G + ++ ++G +
Sbjct: 187 FPGD---TLLVNGAILP-FKAVPGGVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLP 242
Query: 259 QNEYESLDVHVGQCFTVLVTANQD 282
+ L + G+ + VLV N
Sbjct: 243 PVSVDELYLAPGERYEVLVDMNDG 266
|
Length = 451 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 7e-15
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 44 GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103
G + I +NG PGP + D + + V N L E + W GI DGV G +
Sbjct: 61 GRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILLPFQ--MDGVPGVS 118
Query: 104 CP-IPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDD 162
I PG+ +TY V+ Q G+Y YH +GF AG +G L I PV +R +
Sbjct: 119 FAGIAPGETFTYRFPVR-QSGTYWYHSHSGFQEQAGLYGPLIIDPAEPDPVRADR----E 173
Query: 163 FTLLIGDW 170
+L+ DW
Sbjct: 174 HVVLLSDW 181
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|182808 PRK10883, PRK10883, FtsI repressor; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 38/166 (22%)
Query: 52 INGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL--GTNCPIPPG 109
ING++ GP I D++ + N+L EP +T G+Q G L G + P
Sbjct: 70 INGRYLGPTIRVWKGDDVKLIYSNRLTEPVSMTVSGLQ------VPGPLMGGPARMMSPN 123
Query: 110 KNYTYYLQVKDQIGSYIYHPSTGFHRAA---GGFGGLCIHSRSV---VPVPYNRFVEDDF 163
++ L ++ + YH +T A G G+ + V +P+P N + DDF
Sbjct: 124 ADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIP-NHYGVDDF 182
Query: 164 TLLIGDWYTRSHVELGKQLD-----------SGKLLGKPDGVLING 198
++I D K+LD SG +G D +L+NG
Sbjct: 183 PVIIQD----------KRLDNFGTPEYNEPGSGGFVG--DTLLVNG 216
|
Length = 471 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 561 | |||
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 100.0 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.96 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.95 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.76 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.66 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.64 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 99.47 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 99.23 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 99.13 | |
| PLN02835 | 539 | oxidoreductase | 99.1 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 99.09 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 99.05 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 99.01 | |
| PLN02792 | 536 | oxidoreductase | 98.99 | |
| PLN02991 | 543 | oxidoreductase | 98.97 | |
| PLN02604 | 566 | oxidoreductase | 98.93 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 98.87 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 98.86 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 98.85 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 98.83 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.79 | |
| PRK02710 | 119 | plastocyanin; Provisional | 98.75 | |
| PLN02191 | 574 | L-ascorbate oxidase | 98.65 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 98.63 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 98.6 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 98.36 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.21 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 98.09 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.06 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.98 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 97.96 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 97.81 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 97.77 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 97.7 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 97.49 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.41 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 97.4 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.36 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 96.89 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.67 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 96.11 | |
| PRK02710 | 119 | plastocyanin; Provisional | 95.91 | |
| PRK10378 | 375 | inactive ferrous ion transporter periplasmic prote | 95.6 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 95.31 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 94.9 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 94.23 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 94.18 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 93.98 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 93.57 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 92.95 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 91.23 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 90.65 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 90.55 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 89.37 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 87.45 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 84.76 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 81.81 | |
| COG4263 | 637 | NosZ Nitrous oxide reductase [Energy production an | 80.73 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 80.33 |
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-113 Score=916.40 Aligned_cols=548 Identities=70% Similarity=1.231 Sum_probs=440.4
Q ss_pred hHHHHHHHHHHHHHhhcccccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeee
Q 046746 4 TRLMMLLICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLL 83 (561)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~i 83 (561)
-|++.+..|+++++++. ..|.+.+++|+|+|++...++||+.+.+++|||++|||+|++++||+|+|+|+|+|+++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~~~y~~~v~~~~~~pdG~~r~~~~iNGq~PGP~I~~~~GD~v~V~v~N~l~~~tti 82 (552)
T PLN02354 4 GRLLAVLLCLAAAVALV-VRAEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLDEPFLL 82 (552)
T ss_pred HHHHHHHHHHHHHHHHh-hhccccEEEEEEEEEEEEecCCCeEEEEEEECCCCcCCcEEEeCCCEEEEEEEECCCCCccc
Confidence 34554444555544433 34456789999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCce
Q 046746 84 TWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDF 163 (561)
Q Consensus 84 H~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~ 163 (561)
||||++|.+++|+||++++||||+||++|+|+|++.+++||||||||...|+.+||+|+|||+++...+.+|+. .++|+
T Consensus 83 HWHGi~q~~~~~~DGv~~TQcpI~PG~sf~Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~~~p~~~-~d~e~ 161 (552)
T PLN02354 83 TWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYAD-PEDDY 161 (552)
T ss_pred ccccccCCCCcccCCCcCCcCCCCCCCcEEEEEEeCCCCcceEEecCccceecCCccceEEEcCCcCCCCCCCC-cCceE
Confidence 99999999999999999999999999999999997678999999999999999999999999998666667754 57899
Q ss_pred EEEecceeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEe
Q 046746 164 TLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQ 243 (561)
Q Consensus 164 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~ 243 (561)
+|+++||+++....+...+..+...+.++.+||||+.... + ....+.++|++|++|||||||+|....+.|+|+
T Consensus 162 ~l~l~Dw~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~-~-----~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~Id 235 (552)
T PLN02354 162 TVLIGDWYTKSHTALKKFLDSGRTLGRPDGVLINGKSGKG-D-----GKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQ 235 (552)
T ss_pred EEEeeeeccCCHHHHHHHHhcCCCCCCCCeEEEeCCcCCC-C-----CCCceEEEECCCCEEEEEEEecCCCceEEEEEC
Confidence 9999999998776665555555445678999999997411 1 123478999999999999999999999999999
Q ss_pred CcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCC
Q 046746 244 GHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPV 323 (561)
Q Consensus 244 gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~ 323 (561)
||+|+|||+||.+++|..+++|.|++||||||+|++++++|+|||++...+........|+|+|.++....+...|..+.
T Consensus 236 gH~~tVIa~DG~~v~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~ail~Y~g~~~~~~~~~p~~~~ 315 (552)
T PLN02354 236 GHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVASTRFLKKVLTTTGIIRYEGGKGPASPELPEAPV 315 (552)
T ss_pred CceEEEEEeCCcccCCcceeEEEEccCceEEEEEECCCCCCcEEEEEeccccCCCccEEEEEEECCCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999998899999999865444456789999998865432223333222
Q ss_pred CccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCc
Q 046746 324 GWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEE 403 (561)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~ 403 (561)
+..+....+.+.+..+.+....|.+...........++++.+.......++..+|+|||.+|..|+.|+|++.++++..|
T Consensus 316 ~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNn~s~~~p~~P~L~~~~~~~~~g 395 (552)
T PLN02354 316 GWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADK 395 (552)
T ss_pred ccccchhhhhhhhhcccccccCCCCCCccccccccccceEEEecccccCCceEEEEECCccCCCCCCChHHhhhhcccCC
Confidence 22222223333333333322233332221111223445555543222234667899999999999999987765545456
Q ss_pred ccccC-CCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCc
Q 046746 404 VFKYN-VISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVS 482 (561)
Q Consensus 404 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~ 482 (561)
.++.+ +....|..++ ....+++++.++.|++|||+|+|.+...||||||||+||||++|.|.|++.....+|+.||++
T Consensus 396 ~~~~~~~~~~pp~~~~-~~~~~~~v~~~~~~~~VeiVi~n~~~~~HP~HLHGh~F~Vlg~G~G~~~~~~~~~~nl~nP~r 474 (552)
T PLN02354 396 VFKYDTIKDNPPAKIT-KIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVS 474 (552)
T ss_pred ccccCccccCCccccC-ccccCCeeEEcCCCCEEEEEEeCCCCCCCCCcCCCccEEEEeecCCCCCccccccCCcCCCCc
Confidence 65533 1222232111 234567889999999999999999888999999999999999999999876666799999999
Q ss_pred eeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCccccccCccCCCCCCCCCC
Q 046746 483 RYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMSKPTPYSL 560 (561)
Q Consensus 483 rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~~~~~ 560 (561)
|||+.||++||++|||++||||.|+|||||+.|++.||++++.|.+++...++..++|++.+.|+..++..+|-|||+
T Consensus 475 RDTv~vp~~Gw~vIRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~~~ 552 (552)
T PLN02354 475 RHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGKVKGLPKPPPYSI 552 (552)
T ss_pred cceEEeCCCCeEEEEEEecCCeEEeeeccccccccccceEEEEEeCCccccCcCCCCCccccccccccCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999998887777777789999999999999999999985
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-111 Score=902.28 Aligned_cols=525 Identities=59% Similarity=1.047 Sum_probs=426.1
Q ss_pred HHHHHHHHhhcccccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCcc
Q 046746 10 LICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQ 89 (561)
Q Consensus 10 ~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~ 89 (561)
+..++.++.+++..+.+.+|+|+|+|++...++||+++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ttiHWHGl~ 90 (539)
T PLN02835 11 LGVLAVLSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIK 90 (539)
T ss_pred HHHHHHHHHHhhhhccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCCCCCcEEeCCcc
Confidence 44445554555556667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecc
Q 046746 90 HKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGD 169 (561)
Q Consensus 90 ~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d 169 (561)
|.+++||||++++||||+||++|+|+|++++++||||||||...|+.+||+|+|||++++..+.++.. .|+|++|+++|
T Consensus 91 ~~~~~~~DGv~~tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~-~d~e~~l~l~D 169 (539)
T PLN02835 91 QRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPL-PDGDFTLLVGD 169 (539)
T ss_pred cCCCCCCCCCccCcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCC-CCceEEEEeec
Confidence 99999999999999999999999999998778999999999999999999999999876555555544 58899999999
Q ss_pred eeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEE
Q 046746 170 WYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKL 249 (561)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v 249 (561)
|+++....+...+..+...+.++.+||||+.. +.++|++|++|||||||+|..+.+.|+|+||+|+|
T Consensus 170 w~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~-------------~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~V 236 (539)
T PLN02835 170 WYKTSHKTLQQRLDSGKVLPFPDGVLINGQTQ-------------STFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKL 236 (539)
T ss_pred cccCCHHHHHHHhhcCCCCCCCceEEEccccC-------------ceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEE
Confidence 99987666655555565567889999999997 88999999999999999999999999999999999
Q ss_pred EeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCC-Ccccc
Q 046746 250 VEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPV-GWDWS 328 (561)
Q Consensus 250 ia~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~ 328 (561)
|++||++++|..+++|.|++||||||+|++++++|+|||++...+........|+|+|.++..+.+.++|..|. +...+
T Consensus 237 I~~DG~~v~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~~~p~~p~~~~~~~ 316 (539)
T PLN02835 237 VEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWS 316 (539)
T ss_pred EEECCccCCCceeeEEEECcCceEEEEEEcCCCCCcEEEEEEccccCCCcceEEEEEECCCCCCCCCCCCCCCccccccc
Confidence 99999999999999999999999999999998889999998754433446789999998864322223443221 11112
Q ss_pred ccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccC
Q 046746 329 LNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYN 408 (561)
Q Consensus 329 ~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~ 408 (561)
...+....+.+.+....|.+...........++++.+.......+|..+|+|||++|..|+.|+|++.+++. +++|+.+
T Consensus 317 ~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~-~~~~~~~ 395 (539)
T PLN02835 317 MRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGI-PGVFSVN 395 (539)
T ss_pred cchhhccccccCccccCCCCCccccccccCCCceEEEeccccccCCeEEEEECCcccCCCCCChhhhhhhcC-CCccccC
Confidence 222222222333333333332222222223345554432222235667899999999988999987666543 5666644
Q ss_pred CCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEe
Q 046746 409 VISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQV 488 (561)
Q Consensus 409 ~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~v 488 (561)
.....+.. ...+.+++++.++.|++|||+|+|.+...||||||||+||||++|.|.|++.....+|+.||++|||+.|
T Consensus 396 ~~~~~~~~--~~~~~~t~~~~~~~~~~Veivi~N~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~v 473 (539)
T PLN02835 396 SIQSLPSG--GPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQV 473 (539)
T ss_pred ccccCCCC--CccccCCeEEEcCCCCEEEEEEECCCCCCCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEe
Confidence 32222221 1245678899999999999999999988999999999999999999989866555689999999999999
Q ss_pred CCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCccccccCccC
Q 046746 489 FPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVAN 551 (561)
Q Consensus 489 p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~ 551 (561)
+++||++|||+|||||.|+|||||++|+..||++++.|+++.....++++||++++.||..++
T Consensus 474 p~~gw~~IrF~aDNPG~Wl~HCHi~~H~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg~~~~ 536 (539)
T PLN02835 474 YPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIG 536 (539)
T ss_pred CCCCEEEEEEECcCCEEeeeeecchhhhhcccEEEEEEccCCCccccccCCCccccccccCcc
Confidence 999999999999999999999999999999999999999988877778999999999986655
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-111 Score=895.93 Aligned_cols=520 Identities=57% Similarity=1.028 Sum_probs=426.3
Q ss_pred cccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc
Q 046746 22 VEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG 101 (561)
Q Consensus 22 ~~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 101 (561)
..|.+++++|+|+|++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+++++|||||++|.+++||||+++
T Consensus 22 ~~~~~~~~~~~~~vt~~~~~pdG~~r~~~~vNG~~PGP~I~~~~GD~v~V~V~N~L~~~ttiHWHGi~q~~~~~~DGv~~ 101 (543)
T PLN02991 22 VAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYG 101 (543)
T ss_pred hhccCceEEEEEEEEEEEeCCCCEEEEEEEEcCCCCCCcEEEECCCEEEEEecCCCCCCccEEECCcccCCCccccCCCC
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 102 TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 102 ~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
+||||+||++|+|+|++++++||||||||.+.|+.+||+|+|||++++.++.++.. .++|.+|+|+||+++....+...
T Consensus 102 tQcpI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~-~d~d~~i~l~DW~~~~~~~~~~~ 180 (543)
T PLN02991 102 TTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPA-PADDYTVLIGDWYKTNHKDLRAQ 180 (543)
T ss_pred CCCccCCCCcEEEEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCcccCccccc-ccceeEEEecceecCCHHHHHHH
Confidence 99999999999999998778999999999999999999999999998666666644 57899999999999876665544
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNE 261 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 261 (561)
+..++..+++|.+||||++. .+.++|++|++|||||||+|....+.|+|+||+|+||++||.+++|..
T Consensus 181 ~~~~~~~~~~d~~liNG~~~------------~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~~~p~~ 248 (543)
T PLN02991 181 LDNGGKLPLPDGILINGRGS------------GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTP 248 (543)
T ss_pred hhcCCCCCCCCEEEEccCCC------------CceEEECCCCEEEEEEEeccCCeeEEEEECCCEEEEEEeCCcccccee
Confidence 55555566889999999975 278999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccc
Q 046746 262 YESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTA 341 (561)
Q Consensus 262 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~ 341 (561)
++++.|++||||||+|++++++|+|||++...+........|||+|.++......+.|..|.+..++.+.....+..+.+
T Consensus 249 ~~~l~i~~GQRydvlv~a~~~~~~y~i~~~~~~~~~~~~~~AIl~Y~g~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~p 328 (543)
T PLN02991 249 FSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSAGPVSGPIPDGPIQLSWSFDQARAIKTNLTA 328 (543)
T ss_pred eeEEEEcCCcEEEEEEECCCCCCcEEEEEeeccCCCCcceEEEEEeCCCCCCCCCCCCCCCccccccccchhhhhhcccC
Confidence 99999999999999999999899999999865444456789999999875322223444333333332222222233433
Q ss_pred cCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccc
Q 046746 342 SAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENV 421 (561)
Q Consensus 342 ~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 421 (561)
....+.|...+.......++.+.+.......+|..+|+|||.+|..|..|+|++.++.+ .|+|+.+.....|... ..
T Consensus 329 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~p~L~~~~~~~-~g~~~~~~~~~~~~~~--~~ 405 (543)
T PLN02991 329 SGPRPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPADTPLKLADYFKI-AGVYNPGSIPDQPTNG--AI 405 (543)
T ss_pred CCCCCCCCccccccccccceeEEEeecccccCceEEEEECCCccCCCCCChhhhhhhcc-cCccccccccccCCCC--cc
Confidence 22233333322222233444444432221224567899999999999999987766643 5777654222222211 23
Q ss_pred cccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeC
Q 046746 422 TLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMD 501 (561)
Q Consensus 422 ~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~ad 501 (561)
...++++.++.|++|||+|+|.+...||||||||+||||++|.|.|++.+...||+.||++|||+.||++||++|||++|
T Consensus 406 ~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~f~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aD 485 (543)
T PLN02991 406 FPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLD 485 (543)
T ss_pred ccCCcEEEcCCCCEEEEEEeCCCCCCCCeeeCCcceEEEEeCCCCCCcccccccCCCCCCcccEEEECCCCEEEEEEECC
Confidence 35677889999999999999998889999999999999999999998776667999999999999999999999999999
Q ss_pred CcceeeeecccchhhhccceEEEEEecCCcccccccCCCCccccccCccCCCCCCC
Q 046746 502 NAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMSKPTP 557 (561)
Q Consensus 502 npG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~~ 557 (561)
|||.|+|||||..|+..||++++.|.+++...+++++||++.++||..++--+-||
T Consensus 486 NPG~W~~HCHi~~h~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~Cg~~~~~~~~~~ 541 (543)
T PLN02991 486 NVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATGHHTTTP 541 (543)
T ss_pred CCEEeeeeeCccccccccEEEEEEecCCCCccccccCCCcccCccccCCCCCCCCC
Confidence 99999999999999999999999999998888888999999999987777544444
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-110 Score=893.58 Aligned_cols=541 Identities=48% Similarity=0.851 Sum_probs=431.0
Q ss_pred HHHHHHhhcccccCCCeEEEEEEEEEEEecCCC--eeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCcc
Q 046746 12 CFLAAATSGLVEAGSPTFFFTWNVTYGTISPLG--IPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQ 89 (561)
Q Consensus 12 ~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~dG--~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~ 89 (561)
|.+++.+.+.+.|.+.+++|+|++++..+++|| ..+.+++|||++|||+|++++||+|+|+|+|+|+++++|||||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~pdg~~~~~~vi~vNGq~PGPtI~~~~GD~v~V~V~N~L~~~ttIHWHGl~ 90 (596)
T PLN00044 11 AAALALAPAPAGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQ 90 (596)
T ss_pred HHHHhcCCCccccCCceEEEEEEEEEEEEccCCCceeeEEEEEcCcCCCCcEEEECCCEEEEEEEeCCCCCccEEECCcc
Confidence 333443455566788999999999999999999 556899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecc
Q 046746 90 HKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGD 169 (561)
Q Consensus 90 ~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d 169 (561)
|++++|+||++++||||+||++|+|+|++++++||||||||.+.|+.+||+|+|||++++..+.||....++|.+|+|+|
T Consensus 91 q~~t~w~DGv~~TQcPI~PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~D 170 (596)
T PLN00044 91 QRKSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIAD 170 (596)
T ss_pred CCCCccccCCCCCcCCcCCCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEecc
Confidence 99999999999999999999999999998778999999999999999999999999998766666654224799999999
Q ss_pred eeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCC--CCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCccc
Q 046746 170 WYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSD--GKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTM 247 (561)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~--~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 247 (561)
|++++...+...+..+.....++.++|||++. +.++|+ ...+..+.++|++|++|||||||++....+.|+|+||+|
T Consensus 171 W~~~~~~~~~~~l~~g~~~~~~d~~lING~g~-~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~m 249 (596)
T PLN00044 171 WYARDHRALRRALDAGDLLGAPDGVLINAFGP-YQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNL 249 (596)
T ss_pred cccCCHHHHHHHHhcCCCCCCCCceEEcccCc-cccCCccccCCCccceEEECCCCEEEEEEEEccCCceEEEEECCCEE
Confidence 99987766655555554456789999999985 333443 123455789999999999999999999999999999999
Q ss_pred EEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCC-ceEEEEEeecc----CCcceeEEEEEecCCCCCCCCCCCCCC
Q 046746 248 KLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPK-DYYLIASTRFT----RTVITTTAIVRYSDSKGLASPDLPKAP 322 (561)
Q Consensus 248 ~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~~----~~~~~~~ail~y~~~~~~~~~~~p~~p 322 (561)
+||++||.+++|..+++|.|++||||||+|+++++++ +|||++...+. .+...+.|||+|.++......++|..|
T Consensus 250 tVIa~DG~~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~~~AIl~Y~~~~~~~~~~~P~~p 329 (596)
T PLN00044 250 LLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDAP 329 (596)
T ss_pred EEEEeCCcccCceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcceeEEEEECCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999998765 99999875321 245678899999886532222234322
Q ss_pred ---CCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccc-eeccCCeEEEEEcCeeccCCCCchhhhhhc
Q 046746 323 ---VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANT-AHLVNGKVRFAVNGVSYVNSETPLKFAEYY 398 (561)
Q Consensus 323 ---~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~ 398 (561)
.+..++.++...++....+....+.|............+.+.+... ....+|..+|+|||.+|..|+.|+|++.++
T Consensus 330 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~Nnvsf~~p~~p~L~a~~~ 409 (596)
T PLN00044 330 DDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQIF 409 (596)
T ss_pred cccCCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeeccccccccCCeEEEEECcccCCCCCCcchhhhhc
Confidence 1222222222333322232222333332221111112222222110 001135678999999999999999887777
Q ss_pred CCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCC
Q 046746 399 GIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLI 478 (561)
Q Consensus 399 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~ 478 (561)
++ .++|+.++.+.+|.. .....+.++.+++|++|||+|+|.....||||||||+|+||++|.|+|++.++..||+.
T Consensus 410 ~~-~gv~~~~fp~~pp~~---~~~~~t~v~~~~~n~~VeiV~qn~~~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~ 485 (596)
T PLN00044 410 NV-PGVFKLDFPNHPMNR---LPKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKW 485 (596)
T ss_pred cC-CCcccCCCCCCCCcc---ccccCceEEEcCCCCEEEEEEeCCCCCCCCeeEcCccEEEEeecCCCCCCCcccccccC
Confidence 55 577776655544431 23347889999999999999999877899999999999999999999998777789999
Q ss_pred CCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcc-cccccCCCCccccccCccCCCCCCC
Q 046746 479 DAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRS-LRDEYNMPDNALLCGIVANMSKPTP 557 (561)
Q Consensus 479 ~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~-~~~~~~~p~~~~~c~~~~~~~~~~~ 557 (561)
||++|||+.|+++||++|||++||||.|+|||||+.|++.||+++|.|.++.+. .+++++||++++.||.-+++.++-+
T Consensus 486 nPp~RdTv~vp~~gW~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~~v~~~~~~~~~~~~~pP~~~~~Cg~~~~~~~~~~ 565 (596)
T PLN00044 486 DGVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCGALSSLQKEQS 565 (596)
T ss_pred CCCccceEEeCCCCeEEEEEecCCCEEehhhccCchhhcccCcEEEEEecCCCCccccccCCCcccCcccccccCCCCCC
Confidence 999999999999999999999999999999999999999999999999988764 6678999999999998877666544
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-109 Score=879.94 Aligned_cols=514 Identities=53% Similarity=0.937 Sum_probs=421.6
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccC
Q 046746 24 AGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (561)
+.+++++|+|+|++...++||+.+.+++|||++|||+|++++||+|+|+|+|+|+++++|||||++|.+++|+||++++|
T Consensus 12 ~~~~~~~~~~~vt~~~~~pdg~~~~~~~vNGq~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~q~~~~~~DGv~~tq 91 (536)
T PLN02792 12 KADDTLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDGVYGTT 91 (536)
T ss_pred hcCCeEEEEEEEEEEEeCCCCeEEEEEEECCCCCCCcEEEECCCEEEEEEEeCCCCCcCEeCCCcccCCCCccCCCCCCc
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhhc
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLD 183 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 183 (561)
|||+||++|+|+|++++++||||||||...|+.+||+|+|||++++..+.+++. .++|++|+++||+++....+...++
T Consensus 92 cPI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~~~p~~~-~d~e~~i~l~Dw~~~~~~~~~~~~~ 170 (536)
T PLN02792 92 CPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPE-PAGDFTFLIGDWYRRNHTTLKKILD 170 (536)
T ss_pred CccCCCCcEEEEEEeCCCccceEEecCcchhhhcccccceEEeCCcccCcCCCc-ccceeEEEecccccCCHHHHHHHhh
Confidence 999999999999998778999999999999999999999999886555556554 5789999999999987666655555
Q ss_pred CCCCCC-CCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeee
Q 046746 184 SGKLLG-KPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEY 262 (561)
Q Consensus 184 ~~~~~~-~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 262 (561)
.+...+ +++.+||||++.. ..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||++++|..+
T Consensus 171 ~g~~~~~~~d~~liNG~~~~----------~~~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v~p~~~ 240 (536)
T PLN02792 171 GGRKLPLMPDGVMINGQGVS----------YVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMY 240 (536)
T ss_pred ccCcCCCCCCEEEEeccCCC----------CcceEEECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccCCCcce
Confidence 554333 7899999999851 12789999999999999999999999999999999999999999999999
Q ss_pred eeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCC--CCcccccccccccccccc
Q 046746 263 ESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAP--VGWDWSLNQFRSFRWNLT 340 (561)
Q Consensus 263 ~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p--~~~~~~~~~~~~~~~~l~ 340 (561)
++|.|++||||||+|++++++|+|||++...+........|||+|.++..... ..|..| .+..++......++..+.
T Consensus 241 ~~l~i~~GqRydVlV~a~~~~g~Y~i~a~~~~~~~~~~~~ail~Y~g~~~~~~-~~p~~p~~~~~~~~~~~~~~~~~~l~ 319 (536)
T PLN02792 241 TSLDIHVGQTYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSKGHKI-IHARQPDPDDLEWSIKQAQSIRTNLT 319 (536)
T ss_pred eEEEEccCceEEEEEEcCCCCceEEEEEEeccCCCCCceEEEEEECCCCCCCC-CCCCCCCcCCccccccchhhhhhccC
Confidence 99999999999999999988899999998754444567889999988653211 112222 233333322223333333
Q ss_pred ccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccC-CCCCCCCcccc
Q 046746 341 ASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYN-VISDKPADEIE 419 (561)
Q Consensus 341 ~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~-~~~~~p~~~~~ 419 (561)
+..+.+.|...........++++.+.......++...|+|||.+|..|+.|+|++.++.+ .|+|+.+ +...+|..+
T Consensus 320 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~p~L~a~~~~~-~g~~~~~~~~~~p~~~~-- 396 (536)
T PLN02792 320 ASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHFKI-KGVFKVGSIPDKPRRGG-- 396 (536)
T ss_pred CCCCCCCCCcccccceeccceeEEecccccccCceeEEEECCcccCCCCCchhhhhhhcc-CCCcCcccCccCCcccC--
Confidence 322334444333222233445554443222224567899999999999999998776654 4666543 233333222
Q ss_pred cccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEE
Q 046746 420 NVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVS 499 (561)
Q Consensus 420 ~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~ 499 (561)
....+++++.++.|++|||+|+|.....||||||||+||||++|.|.|++...+.||+.||++||||.|+++||++|||+
T Consensus 397 ~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~nP~~RdTv~v~~~gw~aIRf~ 476 (536)
T PLN02792 397 GMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVA 476 (536)
T ss_pred CCccCceEEEcCCCCEEEEEEECCCCCCCCeeeCCCceEEEeecCCCCCcccccccCcCCCCccceEEECCCCEEEEEEE
Confidence 12346889999999999999999888899999999999999999999998767789999999999999999999999999
Q ss_pred eCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCccccccCccCC
Q 046746 500 MDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANM 552 (561)
Q Consensus 500 adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~~ 552 (561)
|||||.|+||||+..|+..||+++|.|.+++...+++++||++.+.||..+++
T Consensus 477 aDNPGvW~~HCh~~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~~~~~Cg~~~~~ 529 (536)
T PLN02792 477 LDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASNK 529 (536)
T ss_pred eeCCEEEeeeEcchhccccceEEEEEEccCCCccccccCCCcccCccccccCC
Confidence 99999999999999999999999999999988887889999999999877664
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-107 Score=870.38 Aligned_cols=508 Identities=47% Similarity=0.837 Sum_probs=403.8
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccC
Q 046746 24 AGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (561)
|.+++|+|+|+|++...++||+.+.+++|||++|||+|++++||+|+|+|+|+|+++|+|||||++|.+++||||++++|
T Consensus 22 ~~a~~~~~~~~vt~~~~~pdG~~~~~~~vNG~~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~~~~~~~~DGv~gtQ 101 (545)
T PLN02168 22 AFAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTWNGLQLRKNSWQDGVRGTN 101 (545)
T ss_pred ccccEEEEEEEEEEEEecCCCeEEEEEEECCcCCCCcEEEECCCEEEEEEEeCCCCCccEeeCCccCCCCCCcCCCCCCc
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhhc
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLD 183 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 183 (561)
|||+||++|+|+|++++++||||||||.+.|+.+||+|+|||++++..+.++.. .+.|++|+++||++.+...+...+.
T Consensus 102 cpI~PG~sftY~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~ 180 (545)
T PLN02168 102 CPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPK-PDEEYDILIGDWFYADHTVMRASLD 180 (545)
T ss_pred CCCCCCCcEEEEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcCc-ccceeeEEEEecCCCCHHHHHhhhh
Confidence 999999999999998778999999999999999999999999998765556544 5889999999999976555544444
Q ss_pred CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeee
Q 046746 184 SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYE 263 (561)
Q Consensus 184 ~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~ 263 (561)
.+...+.++.+||||++. ..+.+++++|++|||||||+|....+.|+|+||+|+||++||.+++|..++
T Consensus 181 ~g~~~~~~d~~liNG~~~-----------~~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~v~p~~~~ 249 (545)
T PLN02168 181 NGHSLPNPDGILFNGRGP-----------EETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYS 249 (545)
T ss_pred cCCCCCCCCEEEEeccCC-----------CcceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCeECCCceee
Confidence 444445789999999974 127899999999999999999999999999999999999999999999999
Q ss_pred eEEEcccceEEEEEEeCCCC-C---ceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCC--Cccccccccccccc
Q 046746 264 SLDVHVGQCFTVLVTANQDP-K---DYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPV--GWDWSLNQFRSFRW 337 (561)
Q Consensus 264 ~v~l~pgeR~dv~v~~~~~~-g---~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~--~~~~~~~~~~~~~~ 337 (561)
+|.|++||||||+|++++++ | +|||++..........+.|+|+|.++......++|..|. +...+.+....+..
T Consensus 250 ~l~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~p~p~~p~~~~~~~~~~~~~~~~~ 329 (545)
T PLN02168 250 SLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDAYLGGVALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALSIRM 329 (545)
T ss_pred EEEEcCCceEEEEEEcCCCCCCCcceEEEEEEecccCCCcceEEEEEECCCCCCCCCCCCCCCcccccccccchhhhhhh
Confidence 99999999999999998654 4 899999875444556788999998764322223333231 11111121112222
Q ss_pred cccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccC-CCCCCCCc
Q 046746 338 NLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYN-VISDKPAD 416 (561)
Q Consensus 338 ~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~-~~~~~p~~ 416 (561)
.+.+....+.|..++.......++++.+.......+|..+|+|||.+|..|..|+|.+.++.+ .+.+..+ +...+|..
T Consensus 330 ~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~-~~~~~~~~~~~~p~~~ 408 (545)
T PLN02168 330 DLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTPLKLVDHFQL-NDTIIPGMFPVYPSNK 408 (545)
T ss_pred cCCCCCCCCCCcccccccccccceeEEecccccccCceEEEEECCCccCCCCCchhhhhhccc-ccccccCCCccCCCcC
Confidence 233322223333222222233445554433211124567899999999999999887665543 2222222 22222211
Q ss_pred ccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEE
Q 046746 417 EIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAI 496 (561)
Q Consensus 417 ~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~i 496 (561)
....+++++.++.|++|||+|+|.....||||||||+||||++|.|.|++.....+|+.||++|||+.||++||++|
T Consensus 409 ---~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~g~g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vI 485 (545)
T PLN02168 409 ---TPTLGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAI 485 (545)
T ss_pred ---ccccCceEEEecCCCEEEEEEeCCCCCCCCeeeCCCceEEEECCCCCCCccccccCCCCCCCccceEEeCCCCEEEE
Confidence 12235788999999999999999988899999999999999999999987766679999999999999999999999
Q ss_pred EEEeCCcceeeeecccchhhhccceEEEEEec-----CCcc-cccccCCCCcccccc
Q 046746 497 LVSMDNAGMWNLRSNIWERNYLGQQLYLSVRL-----HKRS-LRDEYNMPDNALLCG 547 (561)
Q Consensus 497 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~~-----~~~~-~~~~~~~p~~~~~c~ 547 (561)
||+|||||.|+|||||+.|++.||+++++|.+ |+.. .+++++||+++++||
T Consensus 486 RF~aDNPG~Wl~HCHi~~~~h~g~gl~~~v~~~~~e~p~~~~~~~~~~~P~~~~~cg 542 (545)
T PLN02168 486 LIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCG 542 (545)
T ss_pred EEEccCCeEEeeeecCcccceecCcEEEEEEcccccCccccccccccCCChhhcccc
Confidence 99999999999999999999999999998853 3322 344678999999997
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-102 Score=825.58 Aligned_cols=525 Identities=45% Similarity=0.769 Sum_probs=457.8
Q ss_pred ccccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC
Q 046746 21 LVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 21 ~~~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
...|.++.+.|+|+++...+.++|.++.++++||++|||+|+|++||+|+|+|.|+++++++|||||++|..++|+||+.
T Consensus 21 ~~~a~~~~~~~~~~v~~~~~s~l~~~~~vi~iNG~fPGP~I~~~~gD~ivV~v~N~~~~~~sihWhGv~q~kn~w~DG~~ 100 (563)
T KOG1263|consen 21 FSQAEAPIRFHTWKVTYGTASPLCVEKQVITINGQFPGPTINAEEGDTIVVNVVNRLDEPFSIHWHGVRQRKNPWQDGVY 100 (563)
T ss_pred HhhhcCceEEEEeeEEeeeeccCCccceeEeecCCCCCCeEEEEeCCEEEEEEEeCCCCceEEEeccccccCCccccCCc
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999966
Q ss_pred ccCCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeec-chHHhh
Q 046746 101 GTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTR-SHVELG 179 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~-~~~~~~ 179 (561)
++||||+||++|+|+|++++|.||||||+|.+.|+++|++|+|||+++...+.|++. +++|++|+++||+.+ ....+.
T Consensus 101 ~TqCPI~Pg~~~tY~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p~pf~~-pd~E~~ill~dW~~~~~~~~l~ 179 (563)
T KOG1263|consen 101 ITQCPIQPGENFTYRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLPVPFPK-PDKEFTILLGDWYKNLNHKNLK 179 (563)
T ss_pred cccCCcCCCCeEEEEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCCCCCCC-CCceeEEEeEeeccccCHHHHH
Confidence 679999999999999999889999999999999999999999999999877778876 799999999999996 777777
Q ss_pred hhhcCCCCCC-CCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccc
Q 046746 180 KQLDSGKLLG-KPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV 258 (561)
Q Consensus 180 ~~~~~~~~~~-~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~ 258 (561)
..++.++..+ .+|..+|||+.. +.|+| .+.++|++||+|||||+|+|....+.|+|++|+|+||++||.+++
T Consensus 180 ~~~~~~~~~p~~~D~~~iNg~~g-~~~~~------~~~l~v~pGktY~lRiiN~g~~~~l~F~I~~H~ltvVe~Dg~y~~ 252 (563)
T KOG1263|consen 180 NFLDRTGALPNPSDGVLINGRSG-FLYNC------TPTLTVEPGKTYRLRIINAGLNTSLNFSIANHQLTVVEVDGAYTK 252 (563)
T ss_pred HhhccCCCCCCCCCceEECCCCC-cccCc------eeEEEEcCCCEEEEEEEccccccceEEEECCeEEEEEEecceEEe
Confidence 7766665544 389999999984 44554 589999999999999999999999999999999999999999999
Q ss_pred eeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC----cceeEEEEEecCCCCCCCCCCC---CCC--CCccccc
Q 046746 259 QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT----VITTTAIVRYSDSKGLASPDLP---KAP--VGWDWSL 329 (561)
Q Consensus 259 p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~----~~~~~ail~y~~~~~~~~~~~p---~~p--~~~~~~~ 329 (561)
|..+++|.|.||||+||+|++++.+++|+|++.+.+... ...+.++++|.++..+.+...| ..| .+..+++
T Consensus 253 p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~~~~~~~~~~~~t~~~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~s~ 332 (563)
T KOG1263|consen 253 PFTTDSLDIHPGQTYSVLLTADQSPGDYYIAASPYFDASNVPFNLTTTGILRYSGSTHPASEKLPIYPFLPPGNDTAWST 332 (563)
T ss_pred eeeeceEEEcCCcEEEEEEeCCCCCCcEEEEEEeeeccCCcceeeeEEEEEEEeCCcccCcccCcccccCCcccCchhhh
Confidence 999999999999999999999999999999999877655 6788999999985443322222 112 4556777
Q ss_pred cccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCC
Q 046746 330 NQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNV 409 (561)
Q Consensus 330 ~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~ 409 (561)
.+.+.++..++...+.|+|++.+.....+..+.+.+.......+++.+++||+.+|..|+.|.+++.++...++.++.++
T Consensus 333 ~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~siN~isf~~P~tp~~l~~~~~~~~~~~~~d~ 412 (563)
T KOG1263|consen 333 YQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDNKNNGKLRASINNISFVTPKTPSLLAAYFKNIPGYFTNDF 412 (563)
T ss_pred hhhhcccccccccCcccCCCccccccceeeeccEEeccCCCCCCcEEEEEEcceEEECCCCchhhhhhhccCCccccCcc
Confidence 88888888777777888888766555555556666655433446788999999999999999999888876667777665
Q ss_pred CCCCCCccc-ccccccceEEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEeecCCCCCc--CCCCCCCCCCCCce
Q 046746 410 ISDKPADEI-ENVTLQPNVMDATYKAFMEIVLENRQ---NTMQSWILDGYAFFAVGMEPGTWNP--DKRKSYNLIDAVSR 483 (561)
Q Consensus 410 ~~~~p~~~~-~~~~~~~~~~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~--~~~~~~n~~~P~~r 483 (561)
...++...+ ...+.+++++.++.++.|||+|+|.+ ...||||||||+||||+.|.|+|++ +....+|+.||+.|
T Consensus 413 p~~P~~~~~~~~~~~~t~v~~~~~~~~veIVlqN~~~~~~~~hp~HLHG~~F~Vvg~g~G~~~~~~d~~~~yNl~dp~~R 492 (563)
T KOG1263|consen 413 PDKPPIKFDYTGPTLGTSVMKLEFNSFVEIVLQNTSTGTQENHPNHLHGYNFYVVGYGFGNWDPAKDPRKKYNLVDPVSR 492 (563)
T ss_pred CCCCccccCCccccccceEEEeecCCEEEEEEeCCccccCCCCccceeceEEEEEEecccccCcCcChhhhcccCCCccc
Confidence 554443322 22478999999999999999999988 5679999999999999999999999 43467999999999
Q ss_pred eEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCccccccCccCCC
Q 046746 484 YTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMS 553 (561)
Q Consensus 484 DTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~~~ 553 (561)
|||.|+||||++|||.|||||.|+||||+++|...||+++|.|.+++.+.+++.+||.+.++||.-++..
T Consensus 493 ~Tv~V~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f~V~~~~~~~~~~~~~P~~~~~cg~~~~~~ 562 (563)
T KOG1263|consen 493 DTVQVPPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVFIVGNGEESLSSEYPPPKNLPKCGRASGIP 562 (563)
T ss_pred ceEEeCCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEEEEeCCCccCCcCCCCCCCcccccccCCcC
Confidence 9999999999999999999999999999999999999999999999999888999999999999877653
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-100 Score=821.47 Aligned_cols=507 Identities=26% Similarity=0.483 Sum_probs=387.6
Q ss_pred CCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CC
Q 046746 26 SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NC 104 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~ 104 (561)
+.+|+|+|+|+++.+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||++|.+++++||++++ ||
T Consensus 1 ~~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~ 80 (539)
T TIGR03389 1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQC 80 (539)
T ss_pred CceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccC
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999997 99
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHh-hhhhc
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVEL-GKQLD 183 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-~~~~~ 183 (561)
||+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++...+.+++. .|+|++|+++||+++....+ .....
T Consensus 81 pI~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~-~Gl~G~lIV~~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (539)
T TIGR03389 81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLR-ATVYGAIVILPKPGVPYPFPK-PDREVPIILGEWWNADVEAVINQANQ 158 (539)
T ss_pred CcCCCCeEEEEEEecCCCeeEEEecCchhhh-ccceEEEEEcCCCCCCCCCCC-CCceEEEEecccccCCHHHHHHHHHh
Confidence 9999999999999867899999999998665 599999999997665556554 58899999999999765443 33333
Q ss_pred CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeee
Q 046746 184 SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYE 263 (561)
Q Consensus 184 ~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~ 263 (561)
.+....+++++||||+..++ ++|.+ ...+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ~~~~~~~~d~~liNG~~~~~-~~~~~--~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~ 235 (539)
T TIGR03389 159 TGGAPNVSDAYTINGHPGPL-YNCSS--KDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTK 235 (539)
T ss_pred cCCCCCccceEEECCCcCCC-CCCCC--CCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeC
Confidence 44444577999999997521 33322 1346899999999999999999999999999999999999999999999999
Q ss_pred eEEEcccceEEEEEEeCCCCCceEEEEEeeccC----CcceeEEEEEecCCCCCCCCCCCCCC--CCccccccccccccc
Q 046746 264 SLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR----TVITTTAIVRYSDSKGLASPDLPKAP--VGWDWSLNQFRSFRW 337 (561)
Q Consensus 264 ~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p--~~~~~~~~~~~~~~~ 337 (561)
++.|++||||||+|++++.+|+||||+....+. ......|+|+|.++........+..+ .+..... ....
T Consensus 236 ~l~i~~GqRydVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~----~~~~ 311 (539)
T TIGR03389 236 TIVIGPGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAAT----NFSN 311 (539)
T ss_pred eEEecCCCEEEEEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhh----HHHh
Confidence 999999999999999998899999999764322 23567999999876432111111111 0000000 0000
Q ss_pred cccccCCCCCCCCCCCcCCcCcceEEEEcccee----------cc-CCeEEEEEcCeeccCCCCchhhhhhcCCCCcccc
Q 046746 338 NLTASAARPNPQGSFHYGGIPINRTIRLANTAH----------LV-NGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFK 406 (561)
Q Consensus 338 ~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~----------~~-~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~ 406 (561)
.+........|. ..+ ...++++.+..... .. .....|+|||++|..+..|+|++.+.++ .+.+.
T Consensus 312 ~l~~~~~~~~~~-~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~-~~~~~ 386 (539)
T TIGR03389 312 KLRSLNSAQYPA-NVP---VTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGI-SGVFT 386 (539)
T ss_pred hcccccccCCCC-CCC---CCCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhccc-CCccc
Confidence 111100000000 000 11333333222110 01 2246799999999988899875544322 23222
Q ss_pred cCCCCCCCCc----c-----cccccccceEEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEeecCCCCCcCC-CC
Q 046746 407 YNVISDKPAD----E-----IENVTLQPNVMDATYKAFMEIVLENRQ---NTMQSWILDGYAFFAVGMEPGTWNPDK-RK 473 (561)
Q Consensus 407 ~~~~~~~p~~----~-----~~~~~~~~~~~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~ 473 (561)
.+.....|.. + +-..+.+++++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|+... ..
T Consensus 387 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~ 466 (539)
T TIGR03389 387 TDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPA 466 (539)
T ss_pred cCCccCCCccccCCCCCcccccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCcc
Confidence 2211111211 0 001234678899999999999999975 448999999999999999999887543 23
Q ss_pred CCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCccccc
Q 046746 474 SYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLC 546 (561)
Q Consensus 474 ~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c 546 (561)
.+|+.||++|||+.||++||++|||++||||.|+|||||++|+..||+++|.+...+....+++++|++++.|
T Consensus 467 ~~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c 539 (539)
T TIGR03389 467 KFNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539 (539)
T ss_pred ccccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence 6899999999999999999999999999999999999999999999999999877665556789999999999
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-98 Score=809.38 Aligned_cols=513 Identities=28% Similarity=0.496 Sum_probs=390.6
Q ss_pred ccccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCC
Q 046746 21 LVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGV 99 (561)
Q Consensus 21 ~~~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv 99 (561)
.+.|.+.+|+|+|+|+++..++||+.+.+|+|||++|||+|++++||+|+|+|+|++ +++++|||||+++.+++++||+
T Consensus 17 ~~~~~~~~~~y~~~vt~~~~~pdG~~r~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~~~~~~~DG~ 96 (566)
T PLN02604 17 FPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHGIRQIGTPWFDGT 96 (566)
T ss_pred hhhccCcEEEEEEEEEEEEECCCCceeeEEEECCccCCCcEEEECCCEEEEEEEeCCCCCCCCEEeCCCCCCCCccccCC
Confidence 345667899999999999999999999999999999999999999999999999998 6899999999999999999999
Q ss_pred Ccc-CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHh
Q 046746 100 LGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVEL 178 (561)
Q Consensus 100 ~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 178 (561)
+++ ||+|+||++++|+|++ +++||||||||...|+.+||+|+|||+++.+++.++.. |.|.+|+|+||+++.....
T Consensus 97 ~~~tq~~i~pg~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~--d~d~~l~l~Dw~~~~~~~~ 173 (566)
T PLN02604 97 EGVTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPFSY--DYDRSIILTDWYHKSTYEQ 173 (566)
T ss_pred CccccCccCCCCeEEEEEEc-CCCEEEEEeeCcHHHHhCCCeEEEEEEecCCCCCcccc--CcceEEEeeccccCCHHHH
Confidence 987 9999999999999996 68999999999999999999999999998655556654 8899999999999875443
Q ss_pred hhhhcCC--CCCCCCCeEEEcCccCCCCCCCCC---------------CCCCCceEEEEcCCEEEEEEEEcCCCceEEEE
Q 046746 179 GKQLDSG--KLLGKPDGVLINGKSGRLDYDSDG---------------KGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241 (561)
Q Consensus 179 ~~~~~~~--~~~~~~~~~liNG~~~~~~~~~~~---------------~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~ 241 (561)
....... ....+++.++|||++. +.|+. ..+..+.+++++|++|||||||+|..+.+.|+
T Consensus 174 ~~~~~~~~~~~~~~~d~~liNG~G~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRlINa~~~~~~~~s 250 (566)
T PLN02604 174 ALGLSSIPFDWVGEPQSLLIQGKGR---YNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYRLRISSLTALSALSFQ 250 (566)
T ss_pred HHhhccCCCccCCCCCceEEcCCCC---CCCccccCccccccccccCCCCCCceEEEecCCCEEEEEEEeccccceEEEE
Confidence 2222111 1124679999999986 33320 12345689999999999999999999999999
Q ss_pred EeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCC-ceEEEEEeecc-CCcceeEEEEEecCCCCCCCCCCC
Q 046746 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPK-DYYLIASTRFT-RTVITTTAIVRYSDSKGLASPDLP 319 (561)
Q Consensus 242 i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~p 319 (561)
|+||+|+|||+||.+++|.+++.|.|++||||||+|++++++| +||||+..... .+...++|||+|.+.......+ .
T Consensus 251 idgH~~~VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~~~~~~~~aIL~Y~~~~~~~~~~-~ 329 (566)
T PLN02604 251 IEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNNTTPPGLAIFNYYPNHPRRSPP-T 329 (566)
T ss_pred ECCCEEEEEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCCCCCcceeEEEEECCCCCCCCCC-C
Confidence 9999999999999999999999999999999999999998765 89999875432 2346789999998643211100 0
Q ss_pred CCCCCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcC
Q 046746 320 KAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYG 399 (561)
Q Consensus 320 ~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~ 399 (561)
..+....+.. ....+..... ....+.+.. ......++++.+.......++..+|+|||.+|..+..|+|++.+..
T Consensus 330 ~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~w~in~~~~~~p~~p~L~~~~~~ 404 (566)
T PLN02604 330 VPPSGPLWND-VEPRLNQSLA-IKARHGYIH---PPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKEN 404 (566)
T ss_pred CCCCCCcccc-cchhhcchhc-ccccccCcC---CCCCCCCeEEEEeccccccCCeEEEEECcccCCCCCCchhHhhhhc
Confidence 0010000100 0000000000 000000000 0012245555553322222356789999999998888987654432
Q ss_pred CCCcccccCCCCC-CC--------CcccccccccceEEecCCCcEEEEEEEcCC------CCCCceeecCCceEEEeecC
Q 046746 400 IPEEVFKYNVISD-KP--------ADEIENVTLQPNVMDATYKAFMEIVLENRQ------NTMQSWILDGYAFFAVGMEP 464 (561)
Q Consensus 400 ~~~~~~~~~~~~~-~p--------~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~------~~~HP~HlHG~~F~Vl~~~~ 464 (561)
..++|+.+.... .+ ..++...+.+.+++.++.|++||++|+|.+ ...||||||||+||||++|.
T Consensus 405 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGH~F~Vlg~G~ 483 (566)
T PLN02604 405 -LTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVLGYGE 483 (566)
T ss_pred -CCCcccCCCCCcccccccccccCCccccccccCceEEEccCCCeEEEEEECCccccCCCCCCCCEEecCCceEEEEecC
Confidence 245554221100 00 001122345678899999999999999975 45799999999999999999
Q ss_pred CCCCcCC-CCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCcc
Q 046746 465 GTWNPDK-RKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNA 543 (561)
Q Consensus 465 g~~~~~~-~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~ 543 (561)
|.|++.. ...+|+.||++|||+.|+++||++|||+|||||.|+|||||++|+..||+++|.+. ++ +.+++|.++
T Consensus 484 G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aDNPG~WlfHCHI~~Hl~~GM~~v~~e~-~~----~~~~~p~~~ 558 (566)
T PLN02604 484 GKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVFEEG-IE----RVGKLPSSI 558 (566)
T ss_pred CCCCccccccccCCCCCCccceEEeCCCceEEEEEECCCCeEeeEeecchhHhhcCCEEEEeeC-hh----hccCCCCCc
Confidence 9887643 34689999999999999999999999999999999999999999999999999754 32 467889999
Q ss_pred ccccCccC
Q 046746 544 LLCGIVAN 551 (561)
Q Consensus 544 ~~c~~~~~ 551 (561)
++|+..++
T Consensus 559 ~~C~~~~~ 566 (566)
T PLN02604 559 MGCGESKG 566 (566)
T ss_pred CccccCCC
Confidence 99986654
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-97 Score=801.67 Aligned_cols=506 Identities=27% Similarity=0.527 Sum_probs=380.3
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc
Q 046746 24 AGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
|.+++++|+|++++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++|+||++++
T Consensus 19 ~~~~~~~~~~~vt~~~~~pdG~~~~v~~vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~gv 98 (574)
T PLN02191 19 ASAAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAGV 98 (574)
T ss_pred hccceEEEEEEEEEEEeccCCceeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCcc
Confidence 3467899999999999999999999999999999999999999999999999997 789999999999999999999997
Q ss_pred -CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 103 -NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 103 -q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
||||+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++...+.++.. |+|++|+|+||++.........
T Consensus 99 tq~pI~PG~s~~Y~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~--d~e~~l~l~Dw~~~~~~~~~~~ 175 (574)
T PLN02191 99 TQCAINPGETFTYKFTV-EKPGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERLRY--DGEFNLLLSDWWHESIPSQELG 175 (574)
T ss_pred ccCCcCCCCeEEEEEEC-CCCeEEEEeeCcHHHHhCCCEEEEEEccCCCCCCCCCC--CeeEEEeeeccccCChHHHHHh
Confidence 9999999999999997 68999999999999999999999999975443333333 8999999999999753322111
Q ss_pred hcC--CCCCCCCCeEEEcCccCCCCCCCC-------C-----------CCCCCceEEEEcCCEEEEEEEEcCCCceEEEE
Q 046746 182 LDS--GKLLGKPDGVLINGKSGRLDYDSD-------G-----------KGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR 241 (561)
Q Consensus 182 ~~~--~~~~~~~~~~liNG~~~~~~~~~~-------~-----------~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~ 241 (561)
+.. .....+++.+||||++. +.|+ + ..+....++|++|++|||||||+|+...+.|+
T Consensus 176 ~~~~~~~~~~~~d~~liNG~g~---~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~ 252 (574)
T PLN02191 176 LSSKPMRWIGEAQSILINGRGQ---FNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLA 252 (574)
T ss_pred hccCCCCcCCCCCceEECCCCC---CCCcccccccCCcccccceeccCCCCCceEEEEcCCCEEEEEEEecCCceeEEEE
Confidence 111 11224678999999986 3331 1 01233479999999999999999999999999
Q ss_pred EeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCC-CceEEEEEeeccC-CcceeEEEEEecCCCCCC--CCC
Q 046746 242 IQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDP-KDYYLIASTRFTR-TVITTTAIVRYSDSKGLA--SPD 317 (561)
Q Consensus 242 i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~-g~y~i~~~~~~~~-~~~~~~ail~y~~~~~~~--~~~ 317 (561)
|+||+|+|||+||.+++|+.+++|.|++||||||+|++++++ ++||||+...... ......|||+|.+..... +.+
T Consensus 253 idgH~~tVIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~ 332 (574)
T PLN02191 253 VQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPNTTQALTILNYVTAPASKLPSSP 332 (574)
T ss_pred ECCCeEEEEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccCCCCCCceEEEEECCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999876 5899999754322 123457999998754321 111
Q ss_pred CCCCCCCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhh
Q 046746 318 LPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEY 397 (561)
Q Consensus 318 ~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~ 397 (561)
.|..|...+. .........+......+.+.. ...++.+.+.... ...+..+|+|||.+|..+..|+|++.+
T Consensus 333 ~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~-~~~~~~~~~~n~~s~~~p~~P~L~~~~ 403 (574)
T PLN02191 333 PPVTPRWDDF--ERSKNFSKKIFSAMGSPSPPK------KYRKRLILLNTQN-LIDGYTKWAINNVSLVTPATPYLGSVK 403 (574)
T ss_pred CCCCCccccc--chhhcccccccccccCCCCCC------cccceEEEecccc-eeCCeEEEEECcccCcCCCcchHHHHh
Confidence 1111100000 000111111100000011110 1123444443211 123456899999999988999887654
Q ss_pred cCCCCcccccCCCCC---------CCCcccccccccceEEecCCCcEEEEEEEcCC------CCCCceeecCCceEEEee
Q 046746 398 YGIPEEVFKYNVISD---------KPADEIENVTLQPNVMDATYKAFMEIVLENRQ------NTMQSWILDGYAFFAVGM 462 (561)
Q Consensus 398 ~~~~~~~~~~~~~~~---------~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~------~~~HP~HlHG~~F~Vl~~ 462 (561)
.+. .+.|+.+.... .+..+ ...+.+++++.++.|++|||+|+|.+ ...||||||||+||||++
T Consensus 404 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~Vlg~ 481 (574)
T PLN02191 404 YNL-KLGFNRKSPPRSYRMDYDIMNPPPF-PNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVLGY 481 (574)
T ss_pred hcc-CcccccCCCcccccccccccCCCcc-ccccccceeEEecCCCEEEEEEECCCcccCCCCCCCCEEeCCCCeEEEEe
Confidence 432 23332211100 00000 01234677899999999999999985 678999999999999999
Q ss_pred cCCCCCcCC-CCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCC
Q 046746 463 EPGTWNPDK-RKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPD 541 (561)
Q Consensus 463 ~~g~~~~~~-~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~ 541 (561)
|.|.|++.. ...+|+.||++|||+.||++||++|||++||||.|+|||||++|...||.++|. +.++ +++++|+
T Consensus 482 G~g~~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~~-e~~~----~~~~~p~ 556 (574)
T PLN02191 482 GDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFA-EGLN----RIGKIPD 556 (574)
T ss_pred cCCCCCcccCcccccCCCCCcCCeEEeCCCCEEEEEEECCCCEEEEEecCchhhhhcCCEEEEe-cChh----hccCCCc
Confidence 999998632 246899999999999999999999999999999999999999999999999995 3332 3556889
Q ss_pred ccccccCccC
Q 046746 542 NALLCGIVAN 551 (561)
Q Consensus 542 ~~~~c~~~~~ 551 (561)
+++.|+.+++
T Consensus 557 ~~~~C~~~~~ 566 (574)
T PLN02191 557 EALGCGLTKQ 566 (574)
T ss_pred chhhhhcccc
Confidence 9999986544
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-96 Score=795.94 Aligned_cols=499 Identities=29% Similarity=0.560 Sum_probs=379.7
Q ss_pred eEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-CCc
Q 046746 28 TFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-NCP 105 (561)
Q Consensus 28 ~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q~~ 105 (561)
+|+|+|+|+++.+++||+.+.+|+|||++|||+|++++||+|+|+|+|+|. ++++|||||++|.+++||||++++ ||+
T Consensus 1 ~~~y~~~vt~~~~~pdG~~~~~~~~Ng~~pGP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~vtq~~ 80 (541)
T TIGR03388 1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAGVTQCA 80 (541)
T ss_pred CEEEEEEEEEEEecCCCeEeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCccccCC
Confidence 489999999999999999999999999999999999999999999999995 889999999999999999999987 999
Q ss_pred cCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhhcC-
Q 046746 106 IPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDS- 184 (561)
Q Consensus 106 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~- 184 (561)
|+||++|+|+|++ +++||||||||...|+.+||+|+|||+++..++.++.. |+|++|+|+||+++........+..
T Consensus 81 I~PG~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~--d~e~~l~l~Dw~~~~~~~~~~~~~~~ 157 (541)
T TIGR03388 81 INPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPFHY--DGEFNLLLSDWWHKSIHEQEVGLSSK 157 (541)
T ss_pred cCCCCEEEEEEEc-CCCEEEEEEecchHHhhccceEEEEEecCCCCCCCccc--cceEEEEeecccCCCHHHHHhhcccC
Confidence 9999999999997 68999999999999999999999999998655555554 8899999999999865433221111
Q ss_pred C-CCCCCCCeEEEcCccCCCCCCCCC-----------------CCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcc
Q 046746 185 G-KLLGKPDGVLINGKSGRLDYDSDG-----------------KGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHT 246 (561)
Q Consensus 185 ~-~~~~~~~~~liNG~~~~~~~~~~~-----------------~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~ 246 (561)
. ....+++.+||||++. ++|.. ..+....++|++|++|||||||+|....+.|+|+||+
T Consensus 158 ~~~~~~~~d~~liNG~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~ 234 (541)
T TIGR03388 158 PMRWIGEPQSLLINGRGQ---FNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHK 234 (541)
T ss_pred CCcCCCCCcceEECCCCC---CCCccccccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccceEEEEECCCE
Confidence 1 1124678999999986 33310 1223356899999999999999999999999999999
Q ss_pred cEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCC-CceEEEEEeecc-CCcceeEEEEEecCCCCCCC--CCCCCCC
Q 046746 247 MKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDP-KDYYLIASTRFT-RTVITTTAIVRYSDSKGLAS--PDLPKAP 322 (561)
Q Consensus 247 ~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~-g~y~i~~~~~~~-~~~~~~~ail~y~~~~~~~~--~~~p~~p 322 (561)
|+|||+||++++|..+++|.|++||||||+|++++.+ |+||||+..... .+....+|||+|.+...... .+.|..|
T Consensus 235 ~~VIa~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p 314 (541)
T TIGR03388 235 LTVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLTVLNYYPNSPSRLPPTPPPVTP 314 (541)
T ss_pred EEEEEeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCCCCCccEEEEEEECCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999766 589999976533 22345789999987543210 1111112
Q ss_pred CCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCC
Q 046746 323 VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPE 402 (561)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~ 402 (561)
...+.. ........+......+.+. ...++++.+.......++..+|+|||.+|..|..|+|.+.+++. .
T Consensus 315 ~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~p~l~~~~~~~-~ 384 (541)
T TIGR03388 315 AWDDFD--RSKAFSLAIKAAMGSPKPP-------ETSDRRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNL-L 384 (541)
T ss_pred Cccccc--hhhccchhhhccccCCCCC-------CCCCcEEEEeccCcccCceEEEEECcccCCCCCccHHHHHhhcC-C
Confidence 100000 0000000000000011111 12345544322211124556799999999888899887654432 2
Q ss_pred cccccCCCC-CCC-----Ccc--cccccccceEEecCCCcEEEEEEEcCC------CCCCceeecCCceEEEeecCCCCC
Q 046746 403 EVFKYNVIS-DKP-----ADE--IENVTLQPNVMDATYKAFMEIVLENRQ------NTMQSWILDGYAFFAVGMEPGTWN 468 (561)
Q Consensus 403 ~~~~~~~~~-~~p-----~~~--~~~~~~~~~~~~~~~g~~ve~vl~N~~------~~~HP~HlHG~~F~Vl~~~~g~~~ 468 (561)
++|+.+... ..+ ..+ +...+.+++++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~vlg~g~g~~~ 464 (541)
T TIGR03388 385 NAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGKFR 464 (541)
T ss_pred ccccCCCCcccccccccccCCCcccccccCceEEEecCCCeEEEEEECCccccCCCCCCCcEEecCCceEEEeeccCCCC
Confidence 223211100 000 000 112345678899999999999999974 457999999999999999999887
Q ss_pred cC-CCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCcccccc
Q 046746 469 PD-KRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCG 547 (561)
Q Consensus 469 ~~-~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~ 547 (561)
.. ....+|+.||++|||+.|+++||++|||++||||.|+|||||++|+..||+++|.+. ++ +.+++|+++++||
T Consensus 465 ~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~e~-~~----~~~~~P~~~~~C~ 539 (541)
T TIGR03388 465 PGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEG-VE----KVGKLPKEALGCG 539 (541)
T ss_pred cccCcccccCCCCCEeceEEeCCCceEEEEEECCCCeEeeeeccchhhhhcccEEEEecc-cc----ccCCCCccccCCC
Confidence 53 234689999999999999999999999999999999999999999999999999654 22 4667899999997
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-94 Score=775.47 Aligned_cols=488 Identities=23% Similarity=0.414 Sum_probs=370.7
Q ss_pred EEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-CCcc
Q 046746 29 FFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-NCPI 106 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q~~i 106 (561)
-.|+|+|++..+++||+.+.+++|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++++||+|++ ||||
T Consensus 9 ~~~~l~v~~~~~~~~g~~r~~~~~NG~~PGP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~vTQcpI 88 (538)
T TIGR03390 9 PDHILRVTSDNIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPI 88 (538)
T ss_pred ccEEEEEEEeEeccCCeEEEEEEECCcCCCCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcccccCCC
Confidence 36899999999999999999999999999999999999999999999996 899999999999999999999998 9999
Q ss_pred CCCCeEEEEEEec-CceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhhcCC
Q 046746 107 PPGKNYTYYLQVK-DQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG 185 (561)
Q Consensus 107 ~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~ 185 (561)
+||++|+|+|+++ +++||||||||.+.|+. ||+|+|||+++... +++. |+|++|+|+||+++....+...+..+
T Consensus 89 ~PG~sf~Y~f~~~~~q~GT~WYHsH~~~Q~~-~l~G~lIV~~~~~~--~~~~--d~e~~l~l~Dw~~~~~~~~~~~~~~~ 163 (538)
T TIGR03390 89 PPGHFFDYEIKPEPGDAGSYFYHSHVGFQAV-TAFGPLIVEDCEPP--PYKY--DDERILLVSDFFSATDEEIEQGLLST 163 (538)
T ss_pred CCCCcEEEEEEecCCCCeeeEEecCCchhhh-cceeEEEEccCCcc--CCCc--cCcEEEEEeCCCCCCHHHHHhhhhcc
Confidence 9999999999974 58999999999999986 59999999986533 3433 88999999999998776654322221
Q ss_pred C--CCCCCCeEEEcCccCCCCCCC---CCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcc-cEEEeecCcccce
Q 046746 186 K--LLGKPDGVLINGKSGRLDYDS---DGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHT-MKLVEMEGSHVVQ 259 (561)
Q Consensus 186 ~--~~~~~~~~liNG~~~~~~~~~---~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~-~~via~DG~~~~p 259 (561)
. ...+++++||||+....++.. ....|..+.++|++|++|||||||+|..+.+.|+|+||+ |+|||+||.+++|
T Consensus 164 ~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~~~~P 243 (538)
T TIGR03390 164 PFTWSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKP 243 (538)
T ss_pred CCccCCCCceEEECCccccccccccccCCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCCCCCc
Confidence 1 124578999999975322111 112456789999999999999999999999999999999 9999999999999
Q ss_pred eeeeeEEEcccceEEEEEEeCCC-------CCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCC-Cccccccc
Q 046746 260 NEYESLDVHVGQCFTVLVTANQD-------PKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPV-GWDWSLNQ 331 (561)
Q Consensus 260 ~~~~~v~l~pgeR~dv~v~~~~~-------~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~ 331 (561)
..+++|.|++||||||+|++++. +|+||||+.....++.....|||+|.++........|..+. ........
T Consensus 244 ~~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~~~~~~~~~~~~~aiL~Y~~~~~~~~~~~p~~~~~~~~~~~~~ 323 (538)
T TIGR03390 244 AKIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRPKVYRGYAVLRYRSDKASKLPSVPETPPLPLPNSTYD 323 (538)
T ss_pred eEeCeEEEccCCEEEEEEECCCccccccCCCCcEEEEEeecCCCCcceEEEEEEeCCCCCCCCCCCCCCCCCCccCcchh
Confidence 99999999999999999999965 48999999865444455689999998654322111121110 00000000
Q ss_pred cccccccccccCCCCCCCCCCCcCCcCcceEEEEccceec--cCCeEEEEEcCeeccC--CCCchhhhhhcCCCCccccc
Q 046746 332 FRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHL--VNGKVRFAVNGVSYVN--SETPLKFAEYYGIPEEVFKY 407 (561)
Q Consensus 332 ~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~iNg~~f~~--~~~P~l~~~~~~~~~~~~~~ 407 (561)
+.+ ..+.+......+ .++. ....++++.+...... .++..+|+|||++|.. +..|+|...+.+.......
T Consensus 324 ~~~--~~l~pl~~~~~~--~~~~-~~~~d~~~~l~~~~~~~~~~g~~~~~~N~~s~~~~~~~~P~L~~~~~~~~~~~~~- 397 (538)
T TIGR03390 324 WLE--YELEPLSEENNQ--DFPT-LDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDIYENGLPATPN- 397 (538)
T ss_pred hhh--eeeEecCccccC--CCCC-CCcCceEEEEEccccccccCCeEEEEECCcccCCCCCCCchHHHHhcCCCCcCCC-
Confidence 111 112211110000 0000 1235667666654321 2466889999999985 6789876543221000000
Q ss_pred CCCCCCCCcccccccccceEEecCCCcEEEEEEEcCC--------CCCCceeecCCceEEEeecCCCCCcCC-CCCCCCC
Q 046746 408 NVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ--------NTMQSWILDGYAFFAVGMEPGTWNPDK-RKSYNLI 478 (561)
Q Consensus 408 ~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~--------~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~n~~ 478 (561)
..+.........+++++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|++.. ...+|+.
T Consensus 398 ----~~~~~~~~~~~~~~~~~~~~~~~~V~ivi~n~~~~~~~~~~~~~HP~HlHGh~F~vlg~G~G~~~~~~~~~~~nl~ 473 (538)
T TIGR03390 398 ----YTAALANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEAKLENY 473 (538)
T ss_pred ----cccccccCCcCcCceEEEcCCCCEEEEEEECCcccccCCCCCCCCCeeecCCcEEEEcccccccCCccChhhhccC
Confidence 000000001224567888999999999999974 578999999999999999999998643 2357889
Q ss_pred CCCceeEEEeC----------CCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 479 DAVSRYTIQVF----------PNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 479 ~P~~rDTv~vp----------~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
||++|||+.|| +++|++|||++||||.|+|||||++|...||+++|.|.+.++
T Consensus 474 nP~rRDTv~vp~~~~~~~~~~~~~~~~ir~~~dNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~ 536 (538)
T TIGR03390 474 TPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGDAED 536 (538)
T ss_pred CCCeecceeeccccccccccCCCceEEEEEEcCCCeeEEEeccchhhhhccceEEEEeCChHH
Confidence 99999999996 789999999999999999999999999999999999977653
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-79 Score=655.67 Aligned_cols=427 Identities=22% Similarity=0.321 Sum_probs=318.8
Q ss_pred EEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccC
Q 046746 29 FFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIP 107 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~ 107 (561)
++|+|++++..+.++|+.+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +.+||+|++ ||+|+
T Consensus 46 ~~~~L~v~~~~~~~~G~~~~~~~~Ng~~PGP~ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DGvP~vt~~~I~ 123 (587)
T TIGR01480 46 TEFDLTIGETMVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILLP--FQMDGVPGVSFAGIA 123 (587)
T ss_pred ceEEEEEEEEEEecCCeEEEEEEECCccCCceEEEECCCEEEEEEEcCCCCCceEEcCCCcCC--ccccCCCcccccccC
Confidence 799999999999999999999999999999999999999999999999999999999999874 679999998 99999
Q ss_pred CCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhhc----
Q 046746 108 PGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLD---- 183 (561)
Q Consensus 108 PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~---- 183 (561)
||++|+|+|++ .++||||||||...|+.+||+|+|||+++..++..+ |+|++|+|+||++.....+...+.
T Consensus 124 PG~s~~Y~f~~-~~~GTyWYHsH~~~q~~~GL~G~lIV~~~~~~p~~~----D~E~vl~L~Dw~~~~p~~i~~~l~~~~~ 198 (587)
T TIGR01480 124 PGETFTYRFPV-RQSGTYWYHSHSGFQEQAGLYGPLIIDPAEPDPVRA----DREHVVLLSDWTDLDPAALFRKLKVMAG 198 (587)
T ss_pred CCCeEEEEEEC-CCCeeEEEecCchhHhhccceEEEEECCCccccCCC----CceEEEEeeecccCCHHHHHHhhhcccc
Confidence 99999999997 579999999999999999999999999865443333 899999999999765433211100
Q ss_pred ------------------CCC---------C-------C------CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCC
Q 046746 184 ------------------SGK---------L-------L------GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGK 223 (561)
Q Consensus 184 ------------------~~~---------~-------~------~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~ 223 (561)
.|. . . .....+||||+.. ...+++.+++|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~----------~~~~~~~v~~G~ 268 (587)
T TIGR01480 199 HDNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTP----------AGNWTGLFRPGE 268 (587)
T ss_pred cccccccchhhhhhhhccccccccccccccccccccCCcccccccCccceEEEcCccC----------CCCceEEECCCC
Confidence 010 0 0 0112478999975 123679999999
Q ss_pred EEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEE
Q 046746 224 VYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTA 303 (561)
Q Consensus 224 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~a 303 (561)
+|||||||+|+.+.+.|+|+||+|+||++||++++|..++++.|++||||||+|+.+ ..|.|+|++..... ....++
T Consensus 269 rvRLR~INas~~~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~~-~~g~~~i~a~~~~~--~~~~~~ 345 (587)
T TIGR01480 269 KVRLRFINGSAMTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPT-GDDAFTIFAQDSDR--TGYARG 345 (587)
T ss_pred EEEEEEEecCCCceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEecC-CCceEEEEEEecCC--CceEEE
Confidence 999999999999999999999999999999999999999999999999999999987 56899999975432 235677
Q ss_pred EEEecCCCCCCCCCCCCCC----CCccc-c---------cccc----ccc----------c---ccccc--cC-------
Q 046746 304 IVRYSDSKGLASPDLPKAP----VGWDW-S---------LNQF----RSF----------R---WNLTA--SA------- 343 (561)
Q Consensus 304 il~y~~~~~~~~~~~p~~p----~~~~~-~---------~~~~----~~~----------~---~~l~~--~~------- 343 (561)
+|++.+......++++..| .+..- . +... .+. . ..... ..
T Consensus 346 ~l~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (587)
T TIGR01480 346 TLAVRLGLTAPVPALDPRPLLTMKDMGMGGMHHGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMAMDASPKHPASEPLN 425 (587)
T ss_pred EEecCCCCCCCCCCCCCccccChhhcccccccccccccccccCcccccCccccccccccCccccccccccccCcccccCC
Confidence 8887653211111111111 01000 0 0000 000 0 00000 00
Q ss_pred -----CCCCCCCC--------------------CC-----cCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchh
Q 046746 344 -----ARPNPQGS--------------------FH-----YGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLK 393 (561)
Q Consensus 344 -----~~p~p~~~--------------------~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l 393 (561)
....|... +. ......+|++.+.... ......|+|||..|.+. .
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~p~r~~~~~L~g--~m~~~~wtiNG~~~~~~-~--- 499 (587)
T TIGR01480 426 PLVDMIVDMPMDRMDDPGIGLRDNGRRVLTYADLHSLFPPPDGRAPGREIELHLTG--NMERFAWSFDGEAFGLK-T--- 499 (587)
T ss_pred ccccccccCcccccCCCCcccccCCcceeehhhccccccccCcCCCCceEEEEEcC--CCceeEEEECCccCCCC-C---
Confidence 00000000 00 0011234444443311 11245699999876421 1
Q ss_pred hhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCC
Q 046746 394 FAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRK 473 (561)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~ 473 (561)
.+.++.|++|+|+|.|.+.+.|||||||+.|+|+..+ |.+
T Consensus 500 ---------------------------------pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~~~~-G~~------ 539 (587)
T TIGR01480 500 ---------------------------------PLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELEDGQ-GEF------ 539 (587)
T ss_pred ---------------------------------ceEecCCCEEEEEEECCCCCCcceeEcCceeeeecCC-Ccc------
Confidence 2457899999999999999999999999999998753 321
Q ss_pred CCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 474 SYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 474 ~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+.++||+.|+|++++.++|.+||||.|+||||++.|++.|||..++|.
T Consensus 540 ------~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 540 ------QVRKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred ------cccCCceeeCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 357899999999999999999999999999999999999999999873
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-77 Score=641.42 Aligned_cols=412 Identities=20% Similarity=0.235 Sum_probs=302.2
Q ss_pred eEEEEEEEEEEEecCCCe-eeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCcc
Q 046746 28 TFFFTWNVTYGTISPLGI-PQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPI 106 (561)
Q Consensus 28 ~~~~~l~~~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i 106 (561)
...|+|+++++..+++|. ...+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.+ .+||+| ||+|
T Consensus 45 ~~~~~L~~~~~~~~~~~~~~t~~~~yNg~~PGPtIr~~~Gd~v~v~~~N~L~~~ttiHwHGl~~~~--~~DG~p--q~~I 120 (523)
T PRK10965 45 RGRIQLTIQAGQSSFAGKTATATWGYNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEVPG--EVDGGP--QGII 120 (523)
T ss_pred CccEEEEEEEEEEEecCCceeEEEEECCCCCCceEEEECCCEEEEEEEECCCCCccEEcccccCCC--ccCCCC--CCCC
Confidence 456999999999999854 45699999999999999999999999999999999999999999864 599998 8999
Q ss_pred CCCCeEEEEEEecCceeeeeEecCc----hhhhccCceeEEEEecCCCCCCCCCC-CCCCceEEEecceeecchHHhhhh
Q 046746 107 PPGKNYTYYLQVKDQIGSYIYHPST----GFHRAAGGFGGLCIHSRSVVPVPYNR-FVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 107 ~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~-~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
.||++|+|+|++++++||||||||. ..|+++||+|+|||+++.+.+.+++. ++.+|++|+++||+++.++++...
T Consensus 121 ~PG~s~~Y~f~~~q~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~~ 200 (523)
T PRK10965 121 APGGKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQIDYQ 200 (523)
T ss_pred CCCCEEEEEeccCCCCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCceecc
Confidence 9999999999986568999999997 59999999999999997654322221 134699999999999876654332
Q ss_pred hcCC--CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEE-eCcccEEEeecCccc-
Q 046746 182 LDSG--KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI-QGHTMKLVEMEGSHV- 257 (561)
Q Consensus 182 ~~~~--~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~- 257 (561)
.+.. .....++.++|||+.+ |.++++ +++|||||||+|+.+.+.|++ ++|+|+|||.||+++
T Consensus 201 ~~~~~~~~g~~gd~~lVNG~~~-------------p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~vIa~DG~~l~ 266 (523)
T PRK10965 201 LDVMTAAVGWFGDTLLTNGAIY-------------PQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYVIASDGGLLA 266 (523)
T ss_pred ccccccccCccCCeEEECCccc-------------ceeecC-CCEEEEEEEeccCCceEEEEEcCCceEEEEEeCCCccc
Confidence 2211 1123578999999987 888885 579999999999999999998 799999999999986
Q ss_pred ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC-----CcceeEEEEEecCCCCCCCCCCCCCCCCcccccccc
Q 046746 258 VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR-----TVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQF 332 (561)
Q Consensus 258 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~ 332 (561)
+|..+++|.|+|||||||+|+++ +.++|.+........ .......++++.........++|......
T Consensus 267 ~P~~v~~l~lapGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~------- 338 (523)
T PRK10965 267 EPVKVSELPILMGERFEVLVDTS-DGKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLASL------- 338 (523)
T ss_pred CccEeCeEEECccceEEEEEEcC-CCceEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhccC-------
Confidence 79999999999999999999998 568898887643211 01112344555432211111222210000
Q ss_pred ccccccccccCCCCCCCCCCCcCCcCcceEEEEccc-------------------------------e--------ec--
Q 046746 333 RSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANT-------------------------------A--------HL-- 371 (561)
Q Consensus 333 ~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~-------------------------------~--------~~-- 371 (561)
.+.+.+.. ...|++.+... . ..
T Consensus 339 ----------~~~~~~~~-------~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (523)
T PRK10965 339 ----------PALPSLEG-------LTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGA 401 (523)
T ss_pred ----------CCCCcccc-------cceeEEEEeeccccchhhhhhcccccccccccccccccccccccccccccccccc
Confidence 00000000 00111111000 0 00
Q ss_pred -cCCe-----EEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCC
Q 046746 372 -VNGK-----VRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQN 445 (561)
Q Consensus 372 -~~g~-----~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~ 445 (561)
..+. ..|+|||++|... .| .+.++.|++++|.|.|.+.
T Consensus 402 ~~~~~~~~~~~~~~ING~~~~~~-~~-----------------------------------~~~~~~G~~e~w~i~N~~~ 445 (523)
T PRK10965 402 ADAGPAFDFHHANKINGKAFDMN-KP-----------------------------------MFAAKKGQYERWVISGVGD 445 (523)
T ss_pred ccccccccccccccCCCeECCCC-Cc-----------------------------------ceecCCCCEEEEEEEeCCC
Confidence 0000 1146777776421 11 2457899999999999884
Q ss_pred -CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe----CCcceeeeecccchhhhccc
Q 046746 446 -TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM----DNAGMWNLRSNIWERNYLGQ 520 (561)
Q Consensus 446 -~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a----dnpG~w~~HCHil~H~d~GM 520 (561)
+.|||||||++||||+++.... ....+.|||||.|++ +.+.|++++ |++|.||||||||+|||.||
T Consensus 446 ~~~Hp~HlHg~~F~Vl~~~g~~~--------~~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL~Hed~GM 516 (523)
T PRK10965 446 MMLHPFHIHGTQFRILSENGKPP--------AAHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLLEHEDTGM 516 (523)
T ss_pred CCccCeEEeCcEEEEEEecCCCC--------CccccccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCchhhhccCc
Confidence 6899999999999999964221 122468999999988 666666555 46789999999999999999
Q ss_pred eEEEEEe
Q 046746 521 QLYLSVR 527 (561)
Q Consensus 521 m~~~~V~ 527 (561)
|..|.|.
T Consensus 517 M~~~~V~ 523 (523)
T PRK10965 517 MLGFTVS 523 (523)
T ss_pred cceeEeC
Confidence 9999984
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-75 Score=621.05 Aligned_cols=400 Identities=17% Similarity=0.185 Sum_probs=295.0
Q ss_pred EEEEEEEEEEecCC-CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCC
Q 046746 30 FFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPP 108 (561)
Q Consensus 30 ~~~l~~~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~P 108 (561)
.++|+++.+..+++ |..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++... .+||++ ++|.|
T Consensus 47 ~~~l~~~~~~~~~~~g~~~~v~~~ng~~pGPtir~~~Gd~v~v~v~N~L~~~ttiHwHGl~~~~~-~~~g~~---~~I~P 122 (471)
T PRK10883 47 PLFLTLQRAHWSFTGGTKASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTEPVSMTVSGLQVPGP-LMGGPA---RMMSP 122 (471)
T ss_pred cEEEEEEEeEEEecCCceeeEEEECCcccCCeEEEECCCEEEEEEEeCCCCCCceeECCccCCCC-CCCCcc---ccCCC
Confidence 37999999999888 56789999999999999999999999999999999999999999998764 577765 88999
Q ss_pred CCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCCCCCCCC-CCCCceEEEecceeecchHHhhhhhc
Q 046746 109 GKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVPVPYNR-FVEDDFTLLIGDWYTRSHVELGKQLD 183 (561)
Q Consensus 109 G~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~-~~~~e~~l~~~d~~~~~~~~~~~~~~ 183 (561)
|++|+|+|++.+++||||||||.+ .|+.+||+|+|||+++.+++.+++. +..+|++|+++||+++........ .
T Consensus 123 G~~~~y~f~~~~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~~-~ 201 (471)
T PRK10883 123 NADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYN-E 201 (471)
T ss_pred CCeEEEEEecCCCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCcccc-c
Confidence 999999999766799999999975 5999999999999997654333221 134599999999999765443211 1
Q ss_pred CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEE-eCcccEEEeecCccc-ceee
Q 046746 184 SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI-QGHTMKLVEMEGSHV-VQNE 261 (561)
Q Consensus 184 ~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~-~p~~ 261 (561)
.......++.+||||+.. |.++|++ ++|||||||+|+.+.+.|+| ++|+|+|||.||+++ +|..
T Consensus 202 ~~~~g~~gd~~lvNG~~~-------------p~~~v~~-~~~RlRliNas~~~~~~l~l~d~~~~~vIa~DGg~~~~P~~ 267 (471)
T PRK10883 202 PGSGGFVGDTLLVNGVQS-------------PYVEVSR-GWVRLRLLNASNARRYQLQMSDGRPLHVIAGDQGFLPAPVS 267 (471)
T ss_pred cccCCccCCeeEECCccC-------------CeEEecC-CEEEEEEEEccCCceEEEEEcCCCeEEEEEeCCCcccCCcE
Confidence 111234678999999998 8999987 58999999999999999999 899999999997775 7999
Q ss_pred eeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC-cc----------eeEEEEEecCCCCCCCCCCCCCCCCcccccc
Q 046746 262 YESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT-VI----------TTTAIVRYSDSKGLASPDLPKAPVGWDWSLN 330 (561)
Q Consensus 262 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-~~----------~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 330 (561)
++++.|+|||||||+|+++ ..+.+.+++....... .. ....+++........ ..+
T Consensus 268 ~~~l~l~pGeR~dvlVd~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------- 333 (471)
T PRK10883 268 VKQLSLAPGERREILVDMS-NGDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLP--LVT----------- 333 (471)
T ss_pred eCeEEECCCCeEEEEEECC-CCceEEEECCCccccccccccccCCccccccceeEEEEcccccc--CCC-----------
Confidence 9999999999999999997 4456666552110000 00 001112211110000 000
Q ss_pred ccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCC
Q 046746 331 QFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVI 410 (561)
Q Consensus 331 ~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~ 410 (561)
..++..+.+.. +.+ ......+++.+.. . .|.|||++|.+...
T Consensus 334 --~~~p~~l~~~~--~~~------~~~~~~~~~~l~~-------~-~~~INg~~~~~~~~-------------------- 375 (471)
T PRK10883 334 --DNLPMRLLPDE--IME------GSPIRSREISLGD-------D-LPGINGALWDMNRI-------------------- 375 (471)
T ss_pred --CcCChhhcCCC--CCC------CCCcceEEEEecC-------C-cCccCCcccCCCcc--------------------
Confidence 00000110000 000 0111234444432 1 36899998853211
Q ss_pred CCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCC
Q 046746 411 SDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFP 490 (561)
Q Consensus 411 ~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~ 490 (561)
.+.++.|++++|.|.|. +.|||||||+.|||++++..... ..+..|||||.|+
T Consensus 376 ----------------~~~~~~g~~e~W~~~n~--~~HP~HlHg~~FqVl~~~G~~~~--------~~~~gwkDTV~v~- 428 (471)
T PRK10883 376 ----------------DVTAQQGTWERWTVRAD--MPQAFHIEGVMFLIRNVNGAMPF--------PEDRGWKDTVWVD- 428 (471)
T ss_pred ----------------eeecCCCCEEEEEEECC--CCcCEeECCccEEEEEecCCCCC--------ccccCcCcEEEcC-
Confidence 13468899999999886 58999999999999999643111 1223699999996
Q ss_pred CcEEEEEEEeCCcc----eeeeecccchhhhccceEEEEEec
Q 046746 491 NCWAAILVSMDNAG----MWNLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 491 ~g~~~irf~adnpG----~w~~HCHil~H~d~GMm~~~~V~~ 528 (561)
+.+.|+++++++| .||||||||+|||.|||..|+|.+
T Consensus 429 -~~v~i~~~f~~~~~~~~~~m~HCHiLeHeD~GMM~~~~V~~ 469 (471)
T PRK10883 429 -GQVELLVYFGQPSWAHFPFLFYSQTLEMADRGSIGQLLVNP 469 (471)
T ss_pred -CeEEEEEEecCCCCCCCcEEeecccccccccCCccCeEEec
Confidence 4699999999887 899999999999999999999965
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-60 Score=501.87 Aligned_cols=402 Identities=21% Similarity=0.235 Sum_probs=289.2
Q ss_pred ecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEe
Q 046746 40 ISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 40 ~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~ 118 (561)
...++.....|.|||++|||+|++++||+|+|+++|.|.+++++||||+..+ +.+||++.. |+++.||++++|.|+.
T Consensus 45 ~~~~~~~~~~~~~~g~~~gP~i~~~~Gd~v~l~~~N~l~~~t~vh~HG~~~p--~~~dG~~~~~~~~~~~~~~~~y~f~~ 122 (451)
T COG2132 45 AFAPGTGATVWGYNGALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGLPVP--GEMDGVPPLTQIPPGPGETPTYTFTQ 122 (451)
T ss_pred eeecCCCceeEEecccccCceEEEecCCEEEEEEEeCCCCCceEEEcCcccC--ccccCCCcccccCCCCCCcEEEeecC
Confidence 3455778899999999999999999999999999999988899999998665 789998765 9999999999999996
Q ss_pred cCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhhcCCCCCCCCCeEEEcC
Q 046746 119 KDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLING 198 (561)
Q Consensus 119 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG 198 (561)
+++||||||+|.+.|+.+||+|++||++....+..+ |++..++..+|+.......... .........+..+|||
T Consensus 123 -~~~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~~~~~~----d~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~vnG 196 (451)
T COG2132 123 -DVPGTYWYHPHTHGQVYDGLAGALIIEDENSEPLGV----DDEPVILQDDWLDEDGTDLYQE-GPAMGGFPGDTLLVNG 196 (451)
T ss_pred -CCCcceEeccCCCchhhcccceeEEEeCCCCCCCCC----CceEEEEEeeeecCCCCccccC-CccccCCCCCeEEECC
Confidence 557799999999999999999999999976544433 7777777888876544333221 0111234568999999
Q ss_pred ccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEE
Q 046746 199 KSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVT 278 (561)
Q Consensus 199 ~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~ 278 (561)
+.. |.+.++. .+|||||+|+++.+.+.+++.+++|+||+.||.++++..++.+.|.|||||||+++
T Consensus 197 ~~~-------------p~~~~~~-g~~rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p~er~~v~v~ 262 (451)
T COG2132 197 AIL-------------PFKAVPG-GVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVD 262 (451)
T ss_pred Ccc-------------ceeecCC-CeEEEEEEecCCceEEEEEecCceEEEEEeCCcCcCceeeeeEEecCcceEEEEEE
Confidence 776 6666665 56999999999889889999999999999999999998999999999999999999
Q ss_pred eCCCCCceEEEEEeeccCCcceeEEEEEecCCCCC---CCCCCCCCCCCccccccccccccccccccCCCCCCCCCCCcC
Q 046746 279 ANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGL---ASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYG 355 (561)
Q Consensus 279 ~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~---~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~ 355 (561)
+. ..+.+.+.+...... ....+.......... ........+..... ... ....+......+.
T Consensus 263 ~~-~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~--~~~~~~~~~~~~~-------- 327 (451)
T COG2132 263 MN-DGGAVTLTALGEDMP--DTLKGFRAPNPILTPSYPVLNGRVGAPTGDMA--DHA--PVGLLVTILVEPG-------- 327 (451)
T ss_pred cC-CCCeEEEEeccccCC--ceeeeeeccccccccccccccccccCCCcchh--hcc--ccccchhhcCCCc--------
Confidence 98 467777777641111 111111111110000 00000000000000 000 0000000000000
Q ss_pred CcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcE
Q 046746 356 GIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAF 435 (561)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ 435 (561)
...+..+.+.. ..+...|.+|+..|.+. ...+.++.|++
T Consensus 328 -~~~~~~~~l~~----~~~~~~~~~n~~~~~~~------------------------------------~~~~~~~~G~~ 366 (451)
T COG2132 328 -PNRDTDFHLIG----GIGGYVWAINGKAFDDN------------------------------------RVTLIAKAGTR 366 (451)
T ss_pred -ccccccchhhc----ccccccccccCccCCCC------------------------------------cCceeecCCCE
Confidence 00111111111 01223477777665431 12345789999
Q ss_pred EEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchh
Q 046746 436 MEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWER 515 (561)
Q Consensus 436 ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H 515 (561)
++|+|.|.+.+.|||||||+.|+|++.+. ......+.||||+.+.+++.++|+|.+|+||.|+||||+++|
T Consensus 367 ~~~~i~n~~~~~HP~HlHg~~F~v~~~~~---------~~~~~~~~~kDTv~v~~~~~~~v~~~a~~~g~~~~HCH~l~H 437 (451)
T COG2132 367 ERWVLTNDTPMPHPFHLHGHFFQVLSGDA---------PAPGAAPGWKDTVLVAPGERLLVRFDADYPGPWMFHCHILEH 437 (451)
T ss_pred EEEEEECCCCCccCeEEcCceEEEEecCC---------CcccccCccceEEEeCCCeEEEEEEeCCCCCceEEeccchhH
Confidence 99999999999999999999999999971 122345689999999999999999999999999999999999
Q ss_pred hhccceEEEEEec
Q 046746 516 NYLGQQLYLSVRL 528 (561)
Q Consensus 516 ~d~GMm~~~~V~~ 528 (561)
++.|||..+.|..
T Consensus 438 ~~~Gm~~~~~v~~ 450 (451)
T COG2132 438 EDNGMMGQFGVVP 450 (451)
T ss_pred hhcCCeeEEEecC
Confidence 9999999998853
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-48 Score=388.27 Aligned_cols=264 Identities=18% Similarity=0.243 Sum_probs=217.8
Q ss_pred cCCCeEEEEEEEEEEEec-CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC--CCeeeeeCCccCCCCCCCCCCC
Q 046746 24 AGSPTFFFTWNVTYGTIS-PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD--EPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~-~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
+..++++|+|++++...+ .+|..+.+|+|||++|||+|++++||+|+|+|+|+++ ..+++||||. ..+||++
T Consensus 23 ~~~~~~~~~l~a~~~~~~~~~G~~~~~~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~-----~~~dg~~ 97 (311)
T TIGR02376 23 SGPKVVEVTMTIEEKKMVIDDGVTYQAMTFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDFHAA-----TGALGGA 97 (311)
T ss_pred CCCcEEEEEEEEEEEEEEeCCCeEEEEEEECCcccCceEEEECCCEEEEEEEeCCCCCCceeeeecCC-----CccCCCC
Confidence 455889999999999988 4699999999999999999999999999999999985 5789999996 2478877
Q ss_pred cc-CCccCCCCeEEEEEEecCceeeeeEecCc----hhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecch
Q 046746 101 GT-NCPIPPGKNYTYYLQVKDQIGSYIYHPST----GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSH 175 (561)
Q Consensus 101 ~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~ 175 (561)
.+ | |.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ . .|+|++|+++||+++.+
T Consensus 98 ~~~~--I~PG~t~ty~F~~-~~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~~~-~----~d~e~~l~l~d~~~~~~ 169 (311)
T TIGR02376 98 ALTQ--VNPGETATLRFKA-TRPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREGLP-E----YDKEYYIGESDLYTPKD 169 (311)
T ss_pred ccee--ECCCCeEEEEEEc-CCCEEEEEEcCCCCchhHHhhcCcceEEEeeccCCCc-C----cceeEEEeeeeEecccc
Confidence 65 4 9999999999996 679999999995 479999999999999864322 2 38899999999999754
Q ss_pred HHhhhhhc-C-C-CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEee
Q 046746 176 VELGKQLD-S-G-KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEM 252 (561)
Q Consensus 176 ~~~~~~~~-~-~-~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 252 (561)
........ . + .....++.++|||+..++ .+.+++++|+++||||+|+++.+.+.|+++|+.+++|+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~----------~~~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~~ 239 (311)
T TIGR02376 170 EGEGGAYEDDVAAMRTLTPTHVVFNGAVGAL----------TGDNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVWV 239 (311)
T ss_pred ccccccccchHHHHhcCCCCEEEECCccCCC----------CCCcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEEE
Confidence 32111000 0 0 112456899999996411 156799999999999999999999999999999999999
Q ss_pred cCcccceee--eeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCC
Q 046746 253 EGSHVVQNE--YESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSK 311 (561)
Q Consensus 253 DG~~~~p~~--~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 311 (561)
||.++.+.. ++++.|+||||+||+|+++ ++|.|++++............++|+|++..
T Consensus 240 DG~~~~~~~~~~~~~~i~PG~R~dv~v~~~-~pG~y~~~~~~~~~~~~~g~~~~i~~~g~~ 299 (311)
T TIGR02376 240 TGKFANPPNRDVETWFIPGGSAAAALYTFE-QPGVYAYVDHNLIEAFEKGAAAQVKVEGAW 299 (311)
T ss_pred CCcccCCCCCCcceEEECCCceEEEEEEeC-CCeEEEEECcHHHHHHhCCCEEEEEECCCC
Confidence 999998644 8999999999999999999 589999999765433234578999998765
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=258.09 Aligned_cols=115 Identities=38% Similarity=0.734 Sum_probs=107.7
Q ss_pred EEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeE
Q 046746 34 NVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNY 112 (561)
Q Consensus 34 ~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~ 112 (561)
+|++.++.++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++...+++||+++. ||+|.||+++
T Consensus 1 ~v~~~~~~~~~~~~~~~~~ng~~pGPtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~~ 80 (117)
T PF07732_consen 1 NVTETTVSPDGGTRKVWTYNGQFPGPTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGESF 80 (117)
T ss_dssp -EEEEEEETTSTEEEEEEETTBSSEEEEEEETTEEEEEEEEEESSSGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEEE
T ss_pred CeeEEEEEeCCcEEEEEEECCCCCCCEEEEEcCCeeEEEEEeccccccccccceeeeeeeeecCCcccccceeEEeecce
Confidence 478899999988899999999999999999999999999999999999999999999988899999986 9999999999
Q ss_pred EEEEEecCceeeeeEecCchhhhccCceeEEEEecC
Q 046746 113 TYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSR 148 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 148 (561)
+|+|++++++||||||||.+.|..+||+|+|||+++
T Consensus 81 ~Y~~~~~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 81 TYEFTANQQAGTYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp EEEEEESSCSEEEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred eeeEeeeccccceeEeeCCCchhcCcCEEEEEEcCC
Confidence 999998666999999999998878999999999985
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-30 Score=230.99 Aligned_cols=108 Identities=30% Similarity=0.449 Sum_probs=98.5
Q ss_pred ccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe
Q 046746 421 VTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM 500 (561)
Q Consensus 421 ~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a 500 (561)
.+.+..++.++.|++|||+|+|.+...|||||||++|+|++++.+.++......+++.+|.||||+.|+++++++|||++
T Consensus 29 ~~~~~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~ 108 (138)
T PF07731_consen 29 FFGNTPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRA 108 (138)
T ss_dssp SSSTTSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEE
T ss_pred cCCCcceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEe
Confidence 45678889999999999999999999999999999999999988766555555688999999999999999999999999
Q ss_pred CCcceeeeecccchhhhccceEEEEEec
Q 046746 501 DNAGMWNLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 501 dnpG~w~~HCHil~H~d~GMm~~~~V~~ 528 (561)
||||.|+|||||++|++.|||+.+.|.+
T Consensus 109 ~~~G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 109 DNPGPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp TSTEEEEEEESSHHHHHTT-EEEEEECH
T ss_pred ecceEEEEEEchHHHHhCCCeEEEEEcC
Confidence 9999999999999999999999999965
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=214.46 Aligned_cols=147 Identities=33% Similarity=0.619 Sum_probs=119.5
Q ss_pred CceEEEecceeecchHHhhh-hhcCC----CCCCCCCeEEEcCccCCCCCCCC---CCCCCCceEEEEcCCEEEEEEEEc
Q 046746 161 DDFTLLIGDWYTRSHVELGK-QLDSG----KLLGKPDGVLINGKSGRLDYDSD---GKGDNEPLFTMKAGKVYKYRICNV 232 (561)
Q Consensus 161 ~e~~l~~~d~~~~~~~~~~~-~~~~~----~~~~~~~~~liNG~~~~~~~~~~---~~~~~~p~~~v~~G~~~rlRliN~ 232 (561)
.|++|+++||+++....+.. .+..+ ...+++++++|||++. ++|. ...+..+.+++++|++|||||||+
T Consensus 1 ~e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~---~~~~~~~~~~~~~~~~~v~~g~~~rlRliNa 77 (159)
T PF00394_consen 1 EEYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGR---FDCSSADYTGGEPPVIKVKPGERYRLRLINA 77 (159)
T ss_dssp GGGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTC---BTTCTTGSTTSTSGEEEEETTTEEEEEEEEE
T ss_pred CeEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCccc---cccccccccccccceEEEcCCcEEEEEEEec
Confidence 47899999999987655543 32222 1256899999999987 4442 233567999999999999999999
Q ss_pred CCCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee----ccCCcceeEEEEEec
Q 046746 233 GVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR----FTRTVITTTAIVRYS 308 (561)
Q Consensus 233 ~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~----~~~~~~~~~ail~y~ 308 (561)
|+...+.|+|+||+|+|||+||.+++|..++++.|+|||||||+|++++++|+|||++... .......++|+|+|.
T Consensus 78 ~~~~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~ 157 (159)
T PF00394_consen 78 GASTSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQPPGNYWIRASYQHDSINDPQNGNALAILRYD 157 (159)
T ss_dssp SSS-BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECSCSSEEEEEEEESSSSSHSHGGGTTEEEEEET
T ss_pred cCCeeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCCCCCeEEEEEecccCCCccCCCcEEEEEEEEC
Confidence 9999999999999999999999999999999999999999999999997799999999622 122356789999998
Q ss_pred CC
Q 046746 309 DS 310 (561)
Q Consensus 309 ~~ 310 (561)
++
T Consensus 158 ~~ 159 (159)
T PF00394_consen 158 GA 159 (159)
T ss_dssp TS
T ss_pred CC
Confidence 63
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.5e-18 Score=152.67 Aligned_cols=102 Identities=17% Similarity=0.169 Sum_probs=80.4
Q ss_pred CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCC---CCCeeeeeCCccCCCCCCCCCCCcc-CCccCCC---C-e--E
Q 046746 43 LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKL---DEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPG---K-N--Y 112 (561)
Q Consensus 43 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG---~-~--~ 112 (561)
.+....-+.++| .++|+|++++||+|+|+|+|.+ ...+.||+||......+.+||++.. ||+|.|+ + . .
T Consensus 37 ~~~~~~~f~~~~-~~~P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~~~~~ 115 (148)
T TIGR03095 37 PGPSMYSFEIHD-LKNPTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGKFGYT 115 (148)
T ss_pred CCCCceeEEecC-CCCCEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCcccee
Confidence 355566677788 5699999999999999999995 4457777777765555569999876 8988884 1 1 2
Q ss_pred EEEEEecCceeeeeEecCchhhhccCceeEEEEe
Q 046746 113 TYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
+++|+. .++||||||||...|+.+||+|.|||+
T Consensus 116 ~~tf~f-~~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 116 DFTYHF-STAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred EEEEEC-CCCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 445553 379999999999999999999999995
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-14 Score=145.83 Aligned_cols=243 Identities=13% Similarity=0.052 Sum_probs=154.9
Q ss_pred CCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEcc
Q 046746 191 PDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHV 269 (561)
Q Consensus 191 ~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~p 269 (561)
.+.+++||+.. .|.|++++|+++++++.|.... ..+.++++++. +.||... ...|.|
T Consensus 47 ~~~~~~nG~~p------------GP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~dg~~~------~~~I~P 104 (311)
T TIGR02376 47 YQAMTFDGSVP------------GPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GALGGAA------LTQVNP 104 (311)
T ss_pred EEEEEECCccc------------CceEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccCCCCc------ceeECC
Confidence 35799999964 3999999999999999998642 46788998874 4577531 123899
Q ss_pred cceEEEEEEeCCCCCceEEEEEeec--cCC-cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCC
Q 046746 270 GQCFTVLVTANQDPKDYYLIASTRF--TRT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARP 346 (561)
Q Consensus 270 geR~dv~v~~~~~~g~y~i~~~~~~--~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p 346 (561)
|+++.+.+.++ .+|.||.+++... ..+ .....+.|.+.... +.|. .+....+. ..+ |.+......
T Consensus 105 G~t~ty~F~~~-~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~-----~~~~--~d~e~~l~-l~d--~~~~~~~~~- 172 (311)
T TIGR02376 105 GETATLRFKAT-RPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPRE-----GLPE--YDKEYYIG-ESD--LYTPKDEGE- 172 (311)
T ss_pred CCeEEEEEEcC-CCEEEEEEcCCCCchhHHhhcCcceEEEeeccC-----CCcC--cceeEEEe-eee--Eeccccccc-
Confidence 99999999987 7999999998431 111 12233444444321 1111 01000000 000 000000000
Q ss_pred CCCCCCCcCCcCcceEEEEccc-eeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccc
Q 046746 347 NPQGSFHYGGIPINRTIRLANT-AHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQP 425 (561)
Q Consensus 347 ~p~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 425 (561)
. ..+..... +....+ ..+.|||+.+... |
T Consensus 173 --~-----------~~~~~~~~~~~~~~~-~~~~iNG~~~~~~--~---------------------------------- 202 (311)
T TIGR02376 173 --G-----------GAYEDDVAAMRTLTP-THVVFNGAVGALT--G---------------------------------- 202 (311)
T ss_pred --c-----------ccccchHHHHhcCCC-CEEEECCccCCCC--C----------------------------------
Confidence 0 00000000 000011 2367888753110 0
Q ss_pred eEEecCCCcEEEEEEEcCCC-CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCC-ceeEEEeCCCcEEEEEEEeCCc
Q 046746 426 NVMDATYKAFMEIVLENRQN-TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV-SRYTIQVFPNCWAAILVSMDNA 503 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~-~rDTv~vp~~g~~~irf~adnp 503 (561)
.+.++.|++++|.|.|.+. ..+.||++|++|+++..++....+ |. ..||+.|.||+.+.|.++++.|
T Consensus 203 -~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~~DG~~~~~----------~~~~~~~~~i~PG~R~dv~v~~~~p 271 (311)
T TIGR02376 203 -DNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVWVTGKFANP----------PNRDVETWFIPGGSAAAALYTFEQP 271 (311)
T ss_pred -CcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEEECCcccCC----------CCCCcceEEECCCceEEEEEEeCCC
Confidence 1246789999999999874 679999999999999995432221 22 2699999999999999999999
Q ss_pred ceeeeecccchhh-hccceEEEEEec
Q 046746 504 GMWNLRSNIWERN-YLGQQLYLSVRL 528 (561)
Q Consensus 504 G~w~~HCHil~H~-d~GMm~~~~V~~ 528 (561)
|.|++|||...|. ..||++.++|..
T Consensus 272 G~y~~~~~~~~~~~~~g~~~~i~~~g 297 (311)
T TIGR02376 272 GVYAYVDHNLIEAFEKGAAAQVKVEG 297 (311)
T ss_pred eEEEEECcHHHHHHhCCCEEEEEECC
Confidence 9999999999887 679999998853
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.9e-16 Score=166.81 Aligned_cols=112 Identities=17% Similarity=0.275 Sum_probs=91.5
Q ss_pred CeEEEEEEEEEEEecCCCeeeeEEEECCcCCCC--eEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc--
Q 046746 27 PTFFFTWNVTYGTISPLGIPQQGILINGQFPGP--NINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-- 102 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP--~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-- 102 (561)
+.|++++.++. +..+.+|+|||+.+++ .|++++||+|+|+|.|.+...+.|||||+..... ..||....
T Consensus 471 p~r~~~~~L~g------~m~~~~wtiNG~~~~~~~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~-~~~G~~~~~~ 543 (587)
T TIGR01480 471 PGREIELHLTG------NMERFAWSFDGEAFGLKTPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELE-DGQGEFQVRK 543 (587)
T ss_pred CCceEEEEEcC------CCceeEEEECCccCCCCCceEecCCCEEEEEEECCCCCCcceeEcCceeeee-cCCCcccccC
Confidence 45555555532 2357789999998874 7999999999999999999999999999976432 33664322
Q ss_pred -CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEe
Q 046746 103 -NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 103 -q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
...|.||++++|+|.+ +++|+||||||...|...||++.+.|.
T Consensus 544 dTv~V~Pg~t~~~~f~a-d~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 544 HTVDVPPGGKRSFRVTA-DALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred CceeeCCCCEEEEEEEC-CCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 5789999999999995 789999999999999999999999874
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.4e-13 Score=115.03 Aligned_cols=98 Identities=19% Similarity=0.140 Sum_probs=79.1
Q ss_pred ccccCCCeEEEEEEEE--EEEe---cCCCeeeeEE-EECCcCCCCeEEecCCCEEEEEEEeCCCC--CeeeeeCCccCCC
Q 046746 21 LVEAGSPTFFFTWNVT--YGTI---SPLGIPQQGI-LINGQFPGPNINSTTNDNLVINVFNKLDE--PFLLTWPGIQHKK 92 (561)
Q Consensus 21 ~~~a~~~~~~~~l~~~--~~~~---~~dG~~~~~~-~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~--~~~iH~HG~~~~~ 92 (561)
++.|.+..|+|+++|. +..+ ...|++...+ ++|+++..+.|+|++||+|++++.|..+. ...+++||+
T Consensus 17 ~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~~i~a~n~~~~P~~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi---- 92 (135)
T TIGR03096 17 MGTAQAAEQSFTVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPEALVVKKGTPVKVTVENKSPISEGFSIDAYGI---- 92 (135)
T ss_pred ccchhhccceeEEEEeccccEeeEEEeCCEEEEEEEeeeeEEcCCEEEECCCCEEEEEEEeCCCCccceEECCCCc----
Confidence 3456667799999999 6655 3568887666 99999999999999999999999998753 345555543
Q ss_pred CCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchh
Q 046746 93 NSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGF 133 (561)
Q Consensus 93 ~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 133 (561)
+..|.||++.+|+|+ ++++|+|||||-.|.
T Consensus 93 ----------s~~I~pGet~TitF~-adKpG~Y~y~C~~HP 122 (135)
T TIGR03096 93 ----------SEVIKAGETKTISFK-ADKAGAFTIWCQLHP 122 (135)
T ss_pred ----------ceEECCCCeEEEEEE-CCCCEEEEEeCCCCC
Confidence 246899999999999 589999999998763
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.2e-10 Score=119.65 Aligned_cols=233 Identities=17% Similarity=0.186 Sum_probs=140.6
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeee-CCccCCCCCCCCCCCcc------CCccCCCCeEEEEEEe
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTW-PGIQHKKNSWQDGVLGT------NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~~~~DGv~~~------q~~i~PG~~~~Y~f~~ 118 (561)
...+++||+. .|.+.+. |.++++|+.|... ....+.+ .|.... -...||.+.. ...|.|||+++..++.
T Consensus 212 gd~~lVNG~~-~p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~-vIa~DG~~l~~P~~v~~l~lapGeR~dvlv~~ 288 (523)
T PRK10965 212 GDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLY-VIASDGGLLAEPVKVSELPILMGERFEVLVDT 288 (523)
T ss_pred CCeEEECCcc-cceeecC-CCEEEEEEEeccCCceEEEEEcCCceEE-EEEeCCCcccCccEeCeEEECccceEEEEEEc
Confidence 3578999995 7899885 6699999999974 5556766 443222 2468986432 4569999999999986
Q ss_pred cCceeeeeEecCchhhhccC------ceeEEEEecCC---CCCCC-----CCCCCC------CceEEEecceee------
Q 046746 119 KDQIGSYIYHPSTGFHRAAG------GFGGLCIHSRS---VVPVP-----YNRFVE------DDFTLLIGDWYT------ 172 (561)
Q Consensus 119 ~~~~Gt~wYH~H~~~q~~~G------l~G~liV~~~~---~~~~~-----~~~~~~------~e~~l~~~d~~~------ 172 (561)
. +.|.++...-...+...+ -.-.+.|.... ....| .+.... +.+.+.+..+.-
T Consensus 289 ~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~r~~~l~~~~~~~~~~m~~ 367 (523)
T PRK10965 289 S-DGKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLASLPALPSLEGLTVRRLQLSMDPRLDMMGMQM 367 (523)
T ss_pred C-CCceEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhccCCCCCcccccceeEEEEeeccccchhhhhh
Confidence 4 467776654321111100 01122333111 00110 000000 122222211100
Q ss_pred ---cch-HHhhh--------h--------hcCCC--CCCCC---CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEE
Q 046746 173 ---RSH-VELGK--------Q--------LDSGK--LLGKP---DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKY 227 (561)
Q Consensus 173 ---~~~-~~~~~--------~--------~~~~~--~~~~~---~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rl 227 (561)
... ..... . ++.+. ..... ..++|||+.+. .+.+.++++.|++.+|
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~---------~~~~~~~~~~G~~e~w 438 (523)
T PRK10965 368 LMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFD---------MNKPMFAAKKGQYERW 438 (523)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCCeECC---------CCCcceecCCCCEEEE
Confidence 000 00000 0 00000 00001 12489999861 1347789999999999
Q ss_pred EEEEcCCCceEEEEEeCcccEEEeecCcccce---eeeeeEEEcccceEEEEEEeCC---CCCceEEEEEee
Q 046746 228 RICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ---NEYESLDVHVGQCFTVLVTANQ---DPKDYYLIASTR 293 (561)
Q Consensus 228 RliN~~~~~~~~~~i~gh~~~via~DG~~~~p---~~~~~v~l~pgeR~dv~v~~~~---~~g~y~i~~~~~ 293 (561)
+|+|.+....|.|||||+.|+|++.||.+..+ ...|+|.+.+ ++++++++++. .+|.|.++++..
T Consensus 439 ~i~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL 509 (523)
T PRK10965 439 VISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLL 509 (523)
T ss_pred EEEeCCCCCccCeEEeCcEEEEEEecCCCCCccccccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCch
Confidence 99999976678999999999999999998653 4689999976 88999999983 457999999854
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.3e-09 Score=114.84 Aligned_cols=239 Identities=13% Similarity=0.089 Sum_probs=144.0
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEE-eecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLV-EMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|.|+++.|+++++++.|--... ..+|.||....-- ..||.+ .+..-.|.||
T Consensus 23 ~~~~~NG~~P------------GP~i~~~~GD~v~v~v~N~l~~~-tsiHwHGl~q~~~~~~DGv~----~vTq~pI~PG 85 (539)
T TIGR03389 23 SILTVNGKFP------------GPTLYAREGDTVIVNVTNNVQYN-VTIHWHGVRQLRNGWADGPA----YITQCPIQPG 85 (539)
T ss_pred EEEEECCccc------------CCEEEEEcCCEEEEEEEeCCCCC-eeEecCCCCCCCCCCCCCCc----ccccCCcCCC
Confidence 4799999974 49999999999999999998754 4667766543221 258864 2333468999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQG 350 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 350 (561)
+.+...+++.+.+|+||.+++..... ....+-|.+.+... .+.|....+. +....+..-.... ...
T Consensus 86 ~s~~Y~f~~~~~~GT~WYHsH~~~~~--~Gl~G~lIV~~~~~---~~~~~~~~d~--------e~~l~l~Dw~~~~-~~~ 151 (539)
T TIGR03389 86 QSYVYNFTITGQRGTLWWHAHISWLR--ATVYGAIVILPKPG---VPYPFPKPDR--------EVPIILGEWWNAD-VEA 151 (539)
T ss_pred CeEEEEEEecCCCeeEEEecCchhhh--ccceEEEEEcCCCC---CCCCCCCCCc--------eEEEEecccccCC-HHH
Confidence 99999999865799999999854221 22334333333221 0111100000 0000000000000 000
Q ss_pred CCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEec
Q 046746 351 SFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDA 430 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 430 (561)
. ... . ..... ...-.-.+.|||+..... . | ......++.+
T Consensus 152 -~------~~~-~-~~~~~-~~~~~d~~liNG~~~~~~-----------------~----------~---~~~~~~~i~v 191 (539)
T TIGR03389 152 -V------INQ-A-NQTGG-APNVSDAYTINGHPGPLY-----------------N----------C---SSKDTFKLTV 191 (539)
T ss_pred -H------HHH-H-HhcCC-CCCccceEEECCCcCCCC-----------------C----------C---CCCCceEEEE
Confidence 0 000 0 00000 000012367888642100 0 0 0012346788
Q ss_pred CCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC-cceeee
Q 046746 431 TYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN-AGMWNL 508 (561)
Q Consensus 431 ~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn-pG~w~~ 508 (561)
+.|++++|+|+|.+ ...+-|||+||.|+|++.++. + ..|...|++.|.+|+.+.|.+.++. +|.|.+
T Consensus 192 ~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~-~----------~~P~~~~~l~i~~GqRydVlv~a~~~~g~y~i 260 (539)
T TIGR03389 192 EPGKTYLLRIINAALNDELFFAIANHTLTVVEVDAT-Y----------TKPFKTKTIVIGPGQTTNVLLTADQSPGRYFM 260 (539)
T ss_pred CCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCc-c----------cCceEeCeEEecCCCEEEEEEECCCCCceEEE
Confidence 99999999999987 456899999999999999642 2 2467789999999999999999976 799887
Q ss_pred eccc
Q 046746 509 RSNI 512 (561)
Q Consensus 509 HCHi 512 (561)
+-+.
T Consensus 261 ~~~~ 264 (539)
T TIGR03389 261 AARP 264 (539)
T ss_pred EEec
Confidence 7553
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.8e-09 Score=113.10 Aligned_cols=225 Identities=12% Similarity=0.094 Sum_probs=134.2
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEE-EeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKL-VEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++++++.|.-.. ...+|.||..+.- -..||.+. ..-.|.||
T Consensus 49 ~~~~~NG~~P------------GP~I~~~~GD~v~v~v~N~L~~-~ttiHWHGl~~~~~~~~DGv~~-----tQ~pI~PG 110 (539)
T PLN02835 49 QVILINGQFP------------GPRLDVVTNDNIILNLINKLDQ-PFLLTWNGIKQRKNSWQDGVLG-----TNCPIPPN 110 (539)
T ss_pred EEEEECCcCC------------CCCEEEECCCEEEEEEEeCCCC-CCcEEeCCcccCCCCCCCCCcc-----CcCCCCCC
Confidence 4799999974 3999999999999999999874 3467777765432 24699643 13479999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQG 350 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 350 (561)
+.+...+++.+.+|+||.+++..... .....+-|.+..... .+.|....+.+ +...+..-.... ..
T Consensus 111 ~sf~Y~F~~~~q~GT~WYHsH~~~q~-~~Gl~G~lIV~~~~~---~~~p~~~~d~e--------~~l~l~Dw~~~~--~~ 176 (539)
T PLN02835 111 SNYTYKFQTKDQIGTFTYFPSTLFHK-AAGGFGAINVYERPR---IPIPFPLPDGD--------FTLLVGDWYKTS--HK 176 (539)
T ss_pred CcEEEEEEECCCCEeEEEEeCccchh-cCcccceeEEeCCCC---CCcCCCCCCce--------EEEEeeccccCC--HH
Confidence 99999998754699999999743211 111222222222110 01110000000 000000000000 00
Q ss_pred CCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEec
Q 046746 351 SFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDA 430 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 430 (561)
. .... +.... ...-.....|||+.. ..+.+
T Consensus 177 ~-------~~~~--~~~g~-~~~~~d~~liNG~~~----------------------------------------~~~~v 206 (539)
T PLN02835 177 T-------LQQR--LDSGK-VLPFPDGVLINGQTQ----------------------------------------STFSG 206 (539)
T ss_pred H-------HHHH--hhcCC-CCCCCceEEEccccC----------------------------------------ceEEE
Confidence 0 0000 00000 000001134555421 13567
Q ss_pred CCCcEEEEEEEcCCC-CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC-cceeee
Q 046746 431 TYKAFMEIVLENRQN-TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN-AGMWNL 508 (561)
Q Consensus 431 ~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn-pG~w~~ 508 (561)
+.|+++.|+|+|.+. ...-|||.||+|.|++.++.. ..|...|++.|.+|+.+.+.++++. +|.|-+
T Consensus 207 ~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~-----------v~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i 275 (539)
T PLN02835 207 DQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSH-----------TIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYI 275 (539)
T ss_pred CCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCcc-----------CCCceeeEEEECcCceEEEEEEcCCCCCcEEE
Confidence 889999999999884 579999999999999996432 2245679999999999999999864 687766
Q ss_pred e
Q 046746 509 R 509 (561)
Q Consensus 509 H 509 (561)
+
T Consensus 276 ~ 276 (539)
T PLN02835 276 V 276 (539)
T ss_pred E
Confidence 5
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.3e-09 Score=112.62 Aligned_cols=220 Identities=14% Similarity=0.129 Sum_probs=132.4
Q ss_pred eeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeee-CCccCCCCCCCCCCCcc------CCccCCCCeEEEEEE
Q 046746 46 PQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTW-PGIQHKKNSWQDGVLGT------NCPIPPGKNYTYYLQ 117 (561)
Q Consensus 46 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~~~~DGv~~~------q~~i~PG~~~~Y~f~ 117 (561)
....+++||+. .|.|.|+.| ++++|+.|... ....+++ .|.... -...||-+.. +..|.|||+++.-++
T Consensus 208 ~gd~~lvNG~~-~p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~-vIa~DGg~~~~P~~~~~l~l~pGeR~dvlVd 284 (471)
T PRK10883 208 VGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLH-VIAGDQGFLPAPVSVKQLSLAPGERREILVD 284 (471)
T ss_pred cCCeeEECCcc-CCeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEE-EEEeCCCcccCCcEeCeEEECCCCeEEEEEE
Confidence 35678999996 799999875 89999999985 5678887 554322 2457864321 456999999999999
Q ss_pred ecCceeeeeEecCchhhhccCcee------------EEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhh-hhcC
Q 046746 118 VKDQIGSYIYHPSTGFHRAAGGFG------------GLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGK-QLDS 184 (561)
Q Consensus 118 ~~~~~Gt~wYH~H~~~q~~~Gl~G------------~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~-~~~~ 184 (561)
. .+.+.+.+++-.......++.+ .+-++.....+ .. ....+..+............. .+..
T Consensus 285 ~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~p~~l~~~~~~~~~~~~~~~~~l 358 (471)
T PRK10883 285 M-SNGDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLP-LV----TDNLPMRLLPDEIMEGSPIRSREISL 358 (471)
T ss_pred C-CCCceEEEECCCccccccccccccCCccccccceeEEEEcccccc-CC----CCcCChhhcCCCCCCCCCcceEEEEe
Confidence 6 4456677765321111111111 11111110000 00 000000000000000000000 0000
Q ss_pred CCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccce---ee
Q 046746 185 GKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ---NE 261 (561)
Q Consensus 185 ~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p---~~ 261 (561)
+ .+.+.|||+.+. ...+.++++.|++++|+|.|. ..|.||||+|.|+|++.||....+ ..
T Consensus 359 ~-----~~~~~INg~~~~---------~~~~~~~~~~g~~e~W~~~n~---~~HP~HlHg~~FqVl~~~G~~~~~~~~gw 421 (471)
T PRK10883 359 G-----DDLPGINGALWD---------MNRIDVTAQQGTWERWTVRAD---MPQAFHIEGVMFLIRNVNGAMPFPEDRGW 421 (471)
T ss_pred c-----CCcCccCCcccC---------CCcceeecCCCCEEEEEEECC---CCcCEeECCccEEEEEecCCCCCccccCc
Confidence 1 123479999861 112457899999999999886 357999999999999999986543 45
Q ss_pred eeeEEEcccceEEEEEEeCCCCC---ceEEEEEee
Q 046746 262 YESLDVHVGQCFTVLVTANQDPK---DYYLIASTR 293 (561)
Q Consensus 262 ~~~v~l~pgeR~dv~v~~~~~~g---~y~i~~~~~ 293 (561)
.|+|.+ + +++.|++++++..+ .|.++++..
T Consensus 422 kDTV~v-~-~~v~i~~~f~~~~~~~~~~m~HCHiL 454 (471)
T PRK10883 422 KDTVWV-D-GQVELLVYFGQPSWAHFPFLFYSQTL 454 (471)
T ss_pred CcEEEc-C-CeEEEEEEecCCCCCCCcEEeecccc
Confidence 799999 3 57999999995444 688888754
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=99.05 E-value=1e-08 Score=111.38 Aligned_cols=233 Identities=12% Similarity=0.077 Sum_probs=139.8
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEE-eecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLV-EMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++++++.|.... ...+|.||..+.-. ..||.+. ..-.|.||
T Consensus 47 ~~~~iNGq~P------------GP~I~~~~GD~v~V~v~N~l~~-~ttiHWHGi~q~~~~~~DGv~~-----TQcpI~PG 108 (552)
T PLN02354 47 QVILINGQFP------------GPNINSTSNNNIVINVFNNLDE-PFLLTWSGIQQRKNSWQDGVPG-----TNCPIPPG 108 (552)
T ss_pred EEEEECCCCc------------CCcEEEeCCCEEEEEEEECCCC-CcccccccccCCCCcccCCCcC-----CcCCCCCC
Confidence 4899999974 4999999999999999999864 33666666544322 4799652 23489999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCc-ceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTV-ITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQ 349 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~ 349 (561)
+.+...+++.+.+|+||.+++.. .|. ....+-|.+.+... .+.|-...+. +....+..-.... .
T Consensus 109 ~sf~Y~F~~~~q~GT~WYHsH~~--~Q~~~Gl~G~lII~~~~~---~~~p~~~~d~--------e~~l~l~Dw~~~~--~ 173 (552)
T PLN02354 109 TNFTYHFQPKDQIGSYFYYPSTG--MHRAAGGFGGLRVNSRLL---IPVPYADPED--------DYTVLIGDWYTKS--H 173 (552)
T ss_pred CcEEEEEEeCCCCcceEEecCcc--ceecCCccceEEEcCCcC---CCCCCCCcCc--------eEEEEeeeeccCC--H
Confidence 99999999864689999998743 221 12233333332211 0111100000 0000000000000 0
Q ss_pred CCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEe
Q 046746 350 GSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMD 429 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 429 (561)
.. ....+.... .........|||+..... ......+.
T Consensus 174 ~~-------~~~~~~~g~---~~~~~d~~liNG~~~~~~---------------------------------~~~~~~~~ 210 (552)
T PLN02354 174 TA-------LKKFLDSGR---TLGRPDGVLINGKSGKGD---------------------------------GKDEPLFT 210 (552)
T ss_pred HH-------HHHHHhcCC---CCCCCCeEEEeCCcCCCC---------------------------------CCCceEEE
Confidence 00 000000000 000011256777531100 01234578
Q ss_pred cCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC-cceee
Q 046746 430 ATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN-AGMWN 507 (561)
Q Consensus 430 ~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn-pG~w~ 507 (561)
++.|+++.|+|+|.+ ....-|||.||.|+||+.+... ..|...|++.|.+|+.+.+.++++. +|.|-
T Consensus 211 v~~Gk~yRlRiINa~~~~~~~f~IdgH~~tVIa~DG~~-----------v~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~ 279 (552)
T PLN02354 211 MKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSH-----------VLQNDYDSLDVHVGQCFSVLVTANQAPKDYY 279 (552)
T ss_pred ECCCCEEEEEEEecCCCceEEEEECCceEEEEEeCCcc-----------cCCcceeEEEEccCceEEEEEECCCCCCcEE
Confidence 899999999999988 5579999999999999996432 2245569999999999999999975 78877
Q ss_pred eecc
Q 046746 508 LRSN 511 (561)
Q Consensus 508 ~HCH 511 (561)
+.-.
T Consensus 280 i~a~ 283 (552)
T PLN02354 280 MVAS 283 (552)
T ss_pred EEEe
Confidence 7655
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.2e-08 Score=108.41 Aligned_cols=219 Identities=13% Similarity=0.125 Sum_probs=131.7
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEE-eecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLV-EMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++++++.|--... ..+|.||..+.-- ..||.+- .+-.|.||
T Consensus 46 ~~~~vNG~~P------------GP~I~~~~GD~v~V~v~N~L~~~-ttiHWHGl~~~~~~~~DGv~g-----tQcpI~PG 107 (545)
T PLN02168 46 QVIVINDMFP------------GPLLNATANDVINVNIFNNLTEP-FLMTWNGLQLRKNSWQDGVRG-----TNCPILPG 107 (545)
T ss_pred EEEEECCcCC------------CCcEEEECCCEEEEEEEeCCCCC-ccEeeCCccCCCCCCcCCCCC-----CcCCCCCC
Confidence 4789999974 49999999999999999998754 4777777544322 2599653 22479999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCC-cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQ 349 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~ 349 (561)
+++...+++++.+|+||.+++.. .| .....+.|...+... ...+.+..-.+.. + .+..-.... .
T Consensus 108 ~sftY~F~~~~q~GT~WYHsH~~--~Q~~~GL~G~lII~~~~~-~~~p~~~~d~e~~--------l--~l~Dw~~~~--~ 172 (545)
T PLN02168 108 TNWTYRFQVKDQIGSYFYFPSLL--LQKAAGGYGAIRIYNPEL-VPVPFPKPDEEYD--------I--LIGDWFYAD--H 172 (545)
T ss_pred CcEEEEEEeCCCCceEEEecChh--hhhhCcceeEEEEcCCcc-cCcCcCcccceee--------E--EEEecCCCC--H
Confidence 99999999865699999999843 22 122333333333221 0011111000000 0 000000000 0
Q ss_pred CCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEe
Q 046746 350 GSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMD 429 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 429 (561)
.. .... +..... ....-...|||+.- ....+.
T Consensus 173 ~~-------~~~~--~~~g~~-~~~~d~~liNG~~~--------------------------------------~~~~~~ 204 (545)
T PLN02168 173 TV-------MRAS--LDNGHS-LPNPDGILFNGRGP--------------------------------------EETFFA 204 (545)
T ss_pred HH-------HHhh--hhcCCC-CCCCCEEEEeccCC--------------------------------------CcceEE
Confidence 00 0000 000000 00001245565421 012467
Q ss_pred cCCCcEEEEEEEcCCC-CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC
Q 046746 430 ATYKAFMEIVLENRQN-TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN 502 (561)
Q Consensus 430 ~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn 502 (561)
++.|+++.|+|+|.+. ..+-|+|.||+|+|++.+.. + ..|..-|++.|.+|+.+.+.+.+++
T Consensus 205 v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~-~----------v~p~~~~~l~i~~GqRydvlv~a~~ 267 (545)
T PLN02168 205 FEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGT-Y----------VQKRVYSSLDIHVGQSYSVLVTAKT 267 (545)
T ss_pred eCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCe-E----------CCCceeeEEEEcCCceEEEEEEcCC
Confidence 8889999999999874 46999999999999998643 2 2355679999999999999999964
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-08 Score=107.70 Aligned_cols=228 Identities=14% Similarity=0.133 Sum_probs=134.9
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEE-eecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLV-EMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++++++.|-... ...+|.||..+.-- ..||.+. + +-.|.||
T Consensus 36 ~~~~vNGq~P------------GP~I~~~~GD~v~V~v~N~L~~-~ttiHWHGl~q~~~~~~DGv~~----t-qcPI~PG 97 (536)
T PLN02792 36 RGILINGQFP------------GPEIRSLTNDNLVINVHNDLDE-PFLLSWNGVHMRKNSYQDGVYG----T-TCPIPPG 97 (536)
T ss_pred EEEEECCCCC------------CCcEEEECCCEEEEEEEeCCCC-CcCEeCCCcccCCCCccCCCCC----C-cCccCCC
Confidence 4799999974 4999999999999999999763 33555555443322 2799643 1 2489999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCcceeEE-EEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTVITTTA-IVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQ 349 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~a-il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~ 349 (561)
+.+..-+++++.+|+||.+++..... .....+ ++.+.....+ .+.+. + +.+ +...+..-.... .
T Consensus 98 ~sftY~F~~~~q~GT~WYHsH~~~q~-~~Gl~G~liI~~~~~~~--~p~~~-~-d~e--------~~i~l~Dw~~~~--~ 162 (536)
T PLN02792 98 KNYTYDFQVKDQVGSYFYFPSLAVQK-AAGGYGSLRIYSLPRIP--VPFPE-P-AGD--------FTFLIGDWYRRN--H 162 (536)
T ss_pred CcEEEEEEeCCCccceEEecCcchhh-hcccccceEEeCCcccC--cCCCc-c-cce--------eEEEecccccCC--H
Confidence 99999999865699999999853211 112222 3233221110 11111 0 000 000000000000 0
Q ss_pred CCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEe
Q 046746 350 GSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMD 429 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 429 (561)
.. ....+..... .....-...|||+... ....+.
T Consensus 163 ~~-------~~~~~~~g~~--~~~~~d~~liNG~~~~-------------------------------------~~~~~~ 196 (536)
T PLN02792 163 TT-------LKKILDGGRK--LPLMPDGVMINGQGVS-------------------------------------YVYSIT 196 (536)
T ss_pred HH-------HHHHhhccCc--CCCCCCEEEEeccCCC-------------------------------------CcceEE
Confidence 00 0000000000 0000112456665310 112467
Q ss_pred cCCCcEEEEEEEcCCC-CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC-cceee
Q 046746 430 ATYKAFMEIVLENRQN-TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN-AGMWN 507 (561)
Q Consensus 430 ~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn-pG~w~ 507 (561)
++.|+++.|+|+|.+. ...-|+|.||.|.|++.+... ..|...|++.|.+|+.+.+.++++. +|.|-
T Consensus 197 v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~-----------v~p~~~~~l~i~~GqRydVlV~a~~~~g~Y~ 265 (536)
T PLN02792 197 VDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTH-----------TVQSMYTSLDIHVGQTYSVLVTMDQPPQNYS 265 (536)
T ss_pred ECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCcc-----------CCCcceeEEEEccCceEEEEEEcCCCCceEE
Confidence 8899999999999884 568999999999999996432 2245569999999999999999976 57766
Q ss_pred ee
Q 046746 508 LR 509 (561)
Q Consensus 508 ~H 509 (561)
+.
T Consensus 266 i~ 267 (536)
T PLN02792 266 IV 267 (536)
T ss_pred EE
Confidence 55
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.7e-08 Score=107.55 Aligned_cols=225 Identities=12% Similarity=0.084 Sum_probs=134.7
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccE-EEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMK-LVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~-via~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++++++.|.-.. ...+|.||..+. --..||.+. + .-.|.||
T Consensus 48 ~~~~vNG~~P------------GP~I~~~~GD~v~V~V~N~L~~-~ttiHWHGi~q~~~~~~DGv~~----t-QcpI~PG 109 (543)
T PLN02991 48 QGILINGKFP------------GPDIISVTNDNLIINVFNHLDE-PFLISWSGIRNWRNSYQDGVYG----T-TCPIPPG 109 (543)
T ss_pred EEEEEcCCCC------------CCcEEEECCCEEEEEecCCCCC-CccEEECCcccCCCccccCCCC----C-CCccCCC
Confidence 4799999975 4999999999999999999864 446777776543 234799643 1 3479999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQG 350 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 350 (561)
+.+..-+++++.+|+||.+++..... .....+-|.+.+... .+.|....+. +....+..-.... ..
T Consensus 110 ~sftY~F~~~~q~GT~WYHsH~~~q~-~~Gl~G~lIV~~~~~---~~~p~~~~d~--------d~~i~l~DW~~~~--~~ 175 (543)
T PLN02991 110 KNYTYALQVKDQIGSFYYFPSLGFHK-AAGGFGAIRISSRPL---IPVPFPAPAD--------DYTVLIGDWYKTN--HK 175 (543)
T ss_pred CcEEEEEEeCCCCcceEEecCcchhh-hCCCeeeEEEeCCcc---cCcccccccc--------eeEEEecceecCC--HH
Confidence 99999999865699999999853221 112233333332211 1111100000 0000000000000 00
Q ss_pred CCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEec
Q 046746 351 SFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDA 430 (561)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 430 (561)
. ....+ ... ....-.-...|||+.. ...+.+
T Consensus 176 ~-------~~~~~--~~~-~~~~~~d~~liNG~~~---------------------------------------~~~~~v 206 (543)
T PLN02991 176 D-------LRAQL--DNG-GKLPLPDGILINGRGS---------------------------------------GATLNI 206 (543)
T ss_pred H-------HHHHh--hcC-CCCCCCCEEEEccCCC---------------------------------------CceEEE
Confidence 0 00000 000 0000001234555421 124678
Q ss_pred CCCcEEEEEEEcCCCC-CCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc-c-eee
Q 046746 431 TYKAFMEIVLENRQNT-MQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA-G-MWN 507 (561)
Q Consensus 431 ~~g~~ve~vl~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp-G-~w~ 507 (561)
+.|+++.|+|+|.+.. .+-|+|.||.|+|++.+.. + ..|...|++.|.+|+.+.+.+.+|.+ | .|+
T Consensus 207 ~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~-~----------~~p~~~~~l~i~~GQRydvlv~a~~~~~~y~i 275 (543)
T PLN02991 207 EPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGT-H----------TIQTPFSSLDVHVGQSYSVLITADQPAKDYYI 275 (543)
T ss_pred CCCCEEEEEEEeccCCeeEEEEECCCEEEEEEeCCc-c----------ccceeeeEEEEcCCcEEEEEEECCCCCCcEEE
Confidence 8999999999998854 6899999999999999643 2 23566799999999999999999774 6 344
Q ss_pred e
Q 046746 508 L 508 (561)
Q Consensus 508 ~ 508 (561)
.
T Consensus 276 ~ 276 (543)
T PLN02991 276 V 276 (543)
T ss_pred E
Confidence 3
|
|
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.93 E-value=6e-09 Score=114.11 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=70.8
Q ss_pred EecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 428 MDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
+.++.|+++++.+.|.. ...|+||+||... .+. .|.. .........|+||+..+++|.++++|.|
T Consensus 57 i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~--~~~---~~~D---------G~~~~tq~~i~pg~s~~y~f~~~~~Gt~ 122 (566)
T PLN02604 57 ILAQQGDTVIVELKNSLLTENVAIHWHGIRQ--IGT---PWFD---------GTEGVTQCPILPGETFTYEFVVDRPGTY 122 (566)
T ss_pred EEEECCCEEEEEEEeCCCCCCCCEEeCCCCC--CCC---cccc---------CCCccccCccCCCCeEEEEEEcCCCEEE
Confidence 56789999999999986 5789999999942 111 0100 0011244578999999999999999999
Q ss_pred eeecccchhhhccceEEEEEecCC
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
.||||...|...||+..+.|.+++
T Consensus 123 wyH~H~~~q~~~Gl~G~liV~~~~ 146 (566)
T PLN02604 123 LYHAHYGMQREAGLYGSIRVSLPR 146 (566)
T ss_pred EEeeCcHHHHhCCCeEEEEEEecC
Confidence 999999999999999999998764
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2e-07 Score=101.63 Aligned_cols=231 Identities=13% Similarity=0.177 Sum_probs=138.4
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEE-eecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLV-EMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++++++.|-... ...+|.||..+..- ..||.+. ..-.|.||
T Consensus 49 ~vi~vNGq~P------------GPtI~~~~GD~v~V~V~N~L~~-~ttIHWHGl~q~~t~w~DGv~~-----TQcPI~PG 110 (596)
T PLN00044 49 EAIGINGQFP------------GPALNVTTNWNLVVNVRNALDE-PLLLTWHGVQQRKSAWQDGVGG-----TNCAIPAG 110 (596)
T ss_pred EEEEEcCcCC------------CCcEEEECCCEEEEEEEeCCCC-CccEEECCccCCCCccccCCCC-----CcCCcCCC
Confidence 4799999974 4999999999999999999874 44778888665433 4799642 33589999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCC--Cc-----cccccccccccccccccC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPV--GW-----DWSLNQFRSFRWNLTASA 343 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~--~~-----~~~~~~~~~~~~~l~~~~ 343 (561)
+.+..-+++++.+|+||.+++..... .....+-|.+.+... .+.+.+. +. +. +|.......+...+.
T Consensus 111 ~sftY~F~~~dq~GT~WYHsH~~~Q~-~~Gl~GalII~~~~~-~~~P~~~-~~~~e~~i~l~DW~~~~~~~~~~~l~--- 184 (596)
T PLN00044 111 WNWTYQFQVKDQVGSFFYAPSTALHR-AAGGYGAITINNRDV-IPIPFGF-PDGGDITLFIADWYARDHRALRRALD--- 184 (596)
T ss_pred CcEEEEEEeCCCCceeEeeccchhhh-hCcCeeEEEEcCccc-ccccccC-CcccceEEEecccccCCHHHHHHHHh---
Confidence 99999999965799999999753211 112233333333211 0011110 00 00 111000000000000
Q ss_pred CCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccc
Q 046746 344 ARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTL 423 (561)
Q Consensus 344 ~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 423 (561)
..... .......|||+.-... ++... +. ..
T Consensus 185 ---------------------~g~~~---~~~d~~lING~g~~~~-----------------n~~~~---~~------~~ 214 (596)
T PLN00044 185 ---------------------AGDLL---GAPDGVLINAFGPYQY-----------------NDSLV---PP------GI 214 (596)
T ss_pred ---------------------cCCCC---CCCCceEEcccCcccc-----------------CCccc---cC------CC
Confidence 00000 0001123555421000 00000 00 01
Q ss_pred cceEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC
Q 046746 424 QPNVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN 502 (561)
Q Consensus 424 ~~~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn 502 (561)
...++.++.|+++.|+|+|.+ ...--|+|-||+|.|++.+ |.+ ..|..-|++.|.+|+.+.+.+++|.
T Consensus 215 ~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVIa~D-G~~----------v~P~~vd~i~I~~GQRydVLV~a~q 283 (596)
T PLN00044 215 TYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAE-GSY----------TSQQNYTNLDIHVGQSYSFLLTMDQ 283 (596)
T ss_pred ccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEEEeC-Ccc----------cCceeeeeEEEcCCceEEEEEECCC
Confidence 123688999999999999987 5678899999999999996 322 2467789999999999999999987
Q ss_pred c-c--eee
Q 046746 503 A-G--MWN 507 (561)
Q Consensus 503 p-G--~w~ 507 (561)
+ | .|+
T Consensus 284 ~~~~~Y~i 291 (596)
T PLN00044 284 NASTDYYV 291 (596)
T ss_pred CCCCceEE
Confidence 5 5 466
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.6e-07 Score=102.42 Aligned_cols=235 Identities=13% Similarity=0.144 Sum_probs=138.7
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEE-EeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKL-VEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++++++.|.-......+|.||..+.- -..||.+.. .+-.|.||
T Consensus 28 ~~~~~NG~~P------------GP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~v----TQcpI~PG 91 (538)
T TIGR03390 28 YSVVVNGTSP------------GPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLA----SQWPIPPG 91 (538)
T ss_pred EEEEECCcCC------------CCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCccc----ccCCCCCC
Confidence 4799999974 499999999999999999865445577777765432 247997632 22358899
Q ss_pred ceEEEEEEeC-CCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCC
Q 046746 271 QCFTVLVTAN-QDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQ 349 (561)
Q Consensus 271 eR~dv~v~~~-~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~ 349 (561)
+.+...++++ ..+|+||.+++... |.....+.|.+.+... .+.. .+.+ ....+..-...+ .
T Consensus 92 ~sf~Y~f~~~~~q~GT~WYHsH~~~--Q~~~l~G~lIV~~~~~---~~~~---~d~e--------~~l~l~Dw~~~~--~ 153 (538)
T TIGR03390 92 HFFDYEIKPEPGDAGSYFYHSHVGF--QAVTAFGPLIVEDCEP---PPYK---YDDE--------RILLVSDFFSAT--D 153 (538)
T ss_pred CcEEEEEEecCCCCeeeEEecCCch--hhhcceeEEEEccCCc---cCCC---ccCc--------EEEEEeCCCCCC--H
Confidence 9999998875 36899999988532 2222444444443211 0110 0000 000000000000 0
Q ss_pred CCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEe
Q 046746 350 GSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMD 429 (561)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 429 (561)
+.+ ...+ ...............|||+......... . + .. ..| ....+.
T Consensus 154 ~~~-------~~~~-~~~~~~~~~~~d~~liNG~~~~~~~~~~-------~-----~-------~~----~~~-~~~~~~ 201 (538)
T TIGR03390 154 EEI-------EQGL-LSTPFTWSGETEAVLLNGKSGNKSFYAQ-------I-----N-------PS----GSC-MLPVID 201 (538)
T ss_pred HHH-------Hhhh-hccCCccCCCCceEEECCcccccccccc-------c-----c-------CC----CCC-cceEEE
Confidence 000 0000 0000000001123567886421110000 0 0 00 011 134678
Q ss_pred cCCCcEEEEEEEcCCC-CCCceeecCCc-eEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc
Q 046746 430 ATYKAFMEIVLENRQN-TMQSWILDGYA-FFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA 503 (561)
Q Consensus 430 ~~~g~~ve~vl~N~~~-~~HP~HlHG~~-F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp 503 (561)
++.|+++.|+|+|.+. ...-|+|.||. |+|++.++. +..|...|++.|.+|+.+.|.+.++.+
T Consensus 202 v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~-----------~~~P~~v~~l~l~~GqRydVlv~~~~~ 266 (538)
T TIGR03390 202 VEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGS-----------YTKPAKIDHLQLGGGQRYSVLFKAKTE 266 (538)
T ss_pred ECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCC-----------CCCceEeCeEEEccCCEEEEEEECCCc
Confidence 9999999999999884 46899999999 999999643 234677899999999999999999763
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.4e-08 Score=103.32 Aligned_cols=230 Identities=17% Similarity=0.148 Sum_probs=143.0
Q ss_pred CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCc----c-CCccCCCCeEEEEEE
Q 046746 44 GIPQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLG----T-NCPIPPGKNYTYYLQ 117 (561)
Q Consensus 44 G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~----~-q~~i~PG~~~~Y~f~ 117 (561)
|.......+||+. -|.+. .++..+++|+.|.- .....+++.|..... ...||.+. + +..+.|||+++...+
T Consensus 186 ~~~g~~~~vnG~~-~p~~~-~~~g~~rlRl~n~~~~~~~~~~~~~~~~~V-i~~DG~~v~~~~~d~~~l~p~er~~v~v~ 262 (451)
T COG2132 186 GFPGDTLLVNGAI-LPFKA-VPGGVVRLRLLNAGNARTYHLALGGGPLTV-IAVDGGPLPPVSVDELYLAPGERYEVLVD 262 (451)
T ss_pred CCCCCeEEECCCc-cceee-cCCCeEEEEEEecCCceEEEEEecCceEEE-EEeCCcCcCceeeeeEEecCcceEEEEEE
Confidence 4455566777743 35454 45555999999998 666777777655443 45677652 2 667999999999998
Q ss_pred ecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecce-eecchHHhhhh-hcCC----C-----
Q 046746 118 VKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDW-YTRSHVELGKQ-LDSG----K----- 186 (561)
Q Consensus 118 ~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~-~~~~~~~~~~~-~~~~----~----- 186 (561)
.++ .|++-+.|.. .+..+-+.+..-....... ++.. .+.+......|- ........... .+.+ .
T Consensus 263 ~~~-~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (451)
T COG2132 263 MND-GGAVTLTALG-EDMPDTLKGFRAPNPILTP--SYPV-LNGRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDFHLI 337 (451)
T ss_pred cCC-CCeEEEEecc-ccCCceeeeeecccccccc--cccc-ccccccCCCcchhhccccccchhhcCCCcccccccchhh
Confidence 643 7888888876 2333333333222221100 0000 011111111110 00000000000 0000 0
Q ss_pred CCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc---ceeeee
Q 046746 187 LLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV---VQNEYE 263 (561)
Q Consensus 187 ~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~---~p~~~~ 263 (561)
.......+.+||+.+. .+...+.++.|++++|+|.|-+. -.|.||+||+.|+|++.| ... .+...|
T Consensus 338 ~~~~~~~~~~n~~~~~---------~~~~~~~~~~G~~~~~~i~n~~~-~~HP~HlHg~~F~v~~~~-~~~~~~~~~~kD 406 (451)
T COG2132 338 GGIGGYVWAINGKAFD---------DNRVTLIAKAGTRERWVLTNDTP-MPHPFHLHGHFFQVLSGD-APAPGAAPGWKD 406 (451)
T ss_pred cccccccccccCccCC---------CCcCceeecCCCEEEEEEECCCC-CccCeEEcCceEEEEecC-CCcccccCccce
Confidence 0012246888888861 12477899999999999999998 667999999999999998 222 346789
Q ss_pred eEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 264 SLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 264 ~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
++.+.|++|+.+.++++ .+|.|.++++..
T Consensus 407 Tv~v~~~~~~~v~~~a~-~~g~~~~HCH~l 435 (451)
T COG2132 407 TVLVAPGERLLVRFDAD-YPGPWMFHCHIL 435 (451)
T ss_pred EEEeCCCeEEEEEEeCC-CCCceEEeccch
Confidence 99999999999999998 788999999854
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.4e-08 Score=104.41 Aligned_cols=233 Identities=11% Similarity=0.091 Sum_probs=135.5
Q ss_pred CeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeEEEEEEecCce-eeeeEecCc
Q 046746 59 PNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNYTYYLQVKDQI-GSYIYHPST 131 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~~Y~f~~~~~~-Gt~wYH~H~ 131 (561)
++|.|++|+++++||.|.. .....++..|..+.. .+.||.+.. ...|.|||+++..+++.+.+ |.||.+.-.
T Consensus 203 ~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~V-Ia~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~ 281 (541)
T TIGR03388 203 QILHVEPGKTYRLRIASTTALAALNFAIEGHKLTV-VEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGV 281 (541)
T ss_pred eEEEECCCCEEEEEEEcccccceEEEEECCCEEEE-EEeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEec
Confidence 3589999999999999987 456777777766543 578998642 44599999999999974334 589998654
Q ss_pred hhhhc-cCceeEEEEecCCCC-CCC---C---CCCCCC----ceEEEecce--eecchHHhhh--hh-cCCCCCCCCCeE
Q 046746 132 GFHRA-AGGFGGLCIHSRSVV-PVP---Y---NRFVED----DFTLLIGDW--YTRSHVELGK--QL-DSGKLLGKPDGV 194 (561)
Q Consensus 132 ~~q~~-~Gl~G~liV~~~~~~-~~~---~---~~~~~~----e~~l~~~d~--~~~~~~~~~~--~~-~~~~~~~~~~~~ 194 (561)
..+.. .....+++....... ..+ . ....+. +..+.+.+. .......... .+ ...........+
T Consensus 282 ~~~~~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (541)
T TIGR03388 282 RGRKPNTPPGLTVLNYYPNSPSRLPPTPPPVTPAWDDFDRSKAFSLAIKAAMGSPKPPETSDRRIVLLNTQNKINGYTKW 361 (541)
T ss_pred ccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCCccccchhhccchhhhccccCCCCCCCCCcEEEEeccCcccCceEEE
Confidence 32211 111124444332111 000 0 000000 000000000 0000000000 00 000000111246
Q ss_pred EEcCccCCCC---------------CCCC-C--------------CCC----CCceEEEEcCCEEEEEEEEcCC-----C
Q 046746 195 LINGKSGRLD---------------YDSD-G--------------KGD----NEPLFTMKAGKVYKYRICNVGV-----K 235 (561)
Q Consensus 195 liNG~~~~~~---------------~~~~-~--------------~~~----~~p~~~v~~G~~~rlRliN~~~-----~ 235 (561)
.+||..+..- ++.. . ..+ ..-.+.++.|+++.+.|.|... .
T Consensus 362 ~~n~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~ 441 (541)
T TIGR03388 362 AINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNS 441 (541)
T ss_pred EECcccCCCCCccHHHHHhhcCCccccCCCCcccccccccccCCCcccccccCceEEEecCCCeEEEEEECCccccCCCC
Confidence 7888765200 0000 0 000 0134788999999999999753 3
Q ss_pred ceEEEEEeCcccEEEeec-Ccc-----------cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 236 TSLNFRIQGHTMKLVEME-GSH-----------VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 236 ~~~~~~i~gh~~~via~D-G~~-----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
..|.||+|||.|+|++.. |.+ ..|...|++.+.++.-+-|-++++ +||.|.++++..
T Consensus 442 ~~HP~HLHGh~F~vlg~g~g~~~~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~ad-NPG~W~~HCHi~ 510 (541)
T TIGR03388 442 ETHPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVAD-NPGVWAFHCHIE 510 (541)
T ss_pred CCCcEEecCCceEEEeeccCCCCcccCcccccCCCCCEeceEEeCCCceEEEEEECC-CCeEeeeeccch
Confidence 468999999999999986 332 137778999999999998899998 899999999854
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.79 E-value=8e-09 Score=92.19 Aligned_cols=89 Identities=19% Similarity=0.253 Sum_probs=72.7
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCC-------------Ccc--CCccCCCCeEEEEEEecCce
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGV-------------LGT--NCPIPPGKNYTYYLQVKDQI 122 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv-------------~~~--q~~i~PG~~~~Y~f~~~~~~ 122 (561)
.+.+.++.|+.+++.+.|.......+|+||.........++. +.. ...|.||+..+.+|+. +.+
T Consensus 33 ~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~-~~~ 111 (138)
T PF07731_consen 33 TPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRA-DNP 111 (138)
T ss_dssp TSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEE-TST
T ss_pred cceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEe-ecc
Confidence 579999999999999999999999999999876422111111 111 3458999999999996 689
Q ss_pred eeeeEecCchhhhccCceeEEEEec
Q 046746 123 GSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 123 Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
|.|.||||...+...||.+.+.|.+
T Consensus 112 G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 112 GPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp EEEEEEESSHHHHHTT-EEEEEECH
T ss_pred eEEEEEEchHHHHhCCCeEEEEEcC
Confidence 9999999999999999999999986
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.4e-07 Score=81.69 Aligned_cols=74 Identities=19% Similarity=0.364 Sum_probs=54.4
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|++++||+| +++|.-..++++.+.|.. +.......+.||++++|.|+. +|+|-|+|-. +...
T Consensus 46 P~~i~v~~Gd~V--~~~N~~~~~H~v~~~~~~--------~~~~~~~~~~pg~t~~~tF~~---~G~y~y~C~~--H~~~ 110 (119)
T PRK02710 46 PSTLTIKAGDTV--KWVNNKLAPHNAVFDGAK--------ELSHKDLAFAPGESWEETFSE---AGTYTYYCEP--HRGA 110 (119)
T ss_pred CCEEEEcCCCEE--EEEECCCCCceEEecCCc--------cccccccccCCCCEEEEEecC---CEEEEEEcCC--CccC
Confidence 478999999985 567876667777765431 100111347899999999982 8999999974 5558
Q ss_pred CceeEEEEe
Q 046746 138 GGFGGLCIH 146 (561)
Q Consensus 138 Gl~G~liV~ 146 (561)
||.|.|+|+
T Consensus 111 gM~G~I~V~ 119 (119)
T PRK02710 111 GMVGKITVE 119 (119)
T ss_pred CcEEEEEEC
Confidence 999999984
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.2e-06 Score=94.05 Aligned_cols=250 Identities=15% Similarity=0.174 Sum_probs=139.1
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEE-EeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKL-VEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++++++.|.-......+|.||....- -..||.+- +..-.|.||
T Consensus 43 ~v~~vNg~~p------------GP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~g----vtq~pI~PG 106 (574)
T PLN02191 43 AVMTVNGQFP------------GPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAG----VTQCAINPG 106 (574)
T ss_pred eEEEECCcCC------------CCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCc----cccCCcCCC
Confidence 5899999974 399999999999999999866455677888775432 13577652 222469999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCCCc-----cccccccccccccccccCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGW-----DWSLNQFRSFRWNLTASAAR 345 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~-----~~~~~~~~~~~~~l~~~~~~ 345 (561)
+.+...++++ .+|+||.+++..... .....+.|.+.+...+. .+..-. .+. +|...........+.. .
T Consensus 107 ~s~~Y~f~~~-~~GT~wYHsH~~~q~-~~Gl~G~liV~~~~~~~-~~~~~d-~e~~l~l~Dw~~~~~~~~~~~~~~---~ 179 (574)
T PLN02191 107 ETFTYKFTVE-KPGTHFYHGHYGMQR-SAGLYGSLIVDVAKGPK-ERLRYD-GEFNLLLSDWWHESIPSQELGLSS---K 179 (574)
T ss_pred CeEEEEEECC-CCeEEEEeeCcHHHH-hCCCEEEEEEccCCCCC-CCCCCC-eeEEEeeeccccCChHHHHHhhcc---C
Confidence 9999999997 699999999853211 11223333333221110 001000 000 1110000000000000 0
Q ss_pred CCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccc
Q 046746 346 PNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQP 425 (561)
Q Consensus 346 p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 425 (561)
+ . +. ........|||+......... ...+...+..| .. .. | .....
T Consensus 180 ~--~-----------~~---------~~~~d~~liNG~g~~~~~~~~---~~~~~~~~~~~-~~----~~--n--~~~~p 225 (574)
T PLN02191 180 P--M-----------RW---------IGEAQSILINGRGQFNCSLAA---QFSNGTELPMC-TF----KE--G--DQCAP 225 (574)
T ss_pred C--C-----------Cc---------CCCCCceEECCCCCCCCcccc---cccCCcccccc-ee----cc--C--CCCCc
Confidence 0 0 00 000112345654311100000 00000000000 00 00 0 00112
Q ss_pred eEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC-c
Q 046746 426 NVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN-A 503 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn-p 503 (561)
.++.++.|+++.|+|+|.+ ...+-|+|.||+|.|++.++. +..|..-|++.|.+|+.+.+.++++. +
T Consensus 226 ~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~-----------~v~P~~v~~l~i~~GqRydVlV~a~~~~ 294 (574)
T PLN02191 226 QTLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEADGN-----------YITPFTTDDIDIYSGESYSVLLTTDQDP 294 (574)
T ss_pred eEEEEcCCCEEEEEEEecCCceeEEEEECCCeEEEEEcCCe-----------eccceEeeeEEEcCCCeEEEEEECCCCC
Confidence 3688999999999999987 567999999999999999643 22467789999999999999999976 4
Q ss_pred c-eeeee
Q 046746 504 G-MWNLR 509 (561)
Q Consensus 504 G-~w~~H 509 (561)
| .|-++
T Consensus 295 ~~~y~ir 301 (574)
T PLN02191 295 SQNYYIS 301 (574)
T ss_pred CCCEEEE
Confidence 4 34433
|
|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.7e-08 Score=81.36 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=48.0
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccC
Q 046746 24 AGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (561)
..+.....++++++.. +-...|+++.|++|+|+++|.....+.+...++.. .
T Consensus 16 ~~~~~~~v~I~~~~~~----------------f~P~~i~v~~G~~v~l~~~N~~~~~h~~~i~~~~~------------~ 67 (104)
T PF13473_consen 16 SAAAAQTVTITVTDFG----------------FSPSTITVKAGQPVTLTFTNNDSRPHEFVIPDLGI------------S 67 (104)
T ss_dssp --------------EE----------------EES-EEEEETTCEEEEEEEE-SSS-EEEEEGGGTE------------E
T ss_pred cccccccccccccCCe----------------EecCEEEEcCCCeEEEEEEECCCCcEEEEECCCce------------E
Confidence 3445566666666553 33358999999999999999987776666666432 2
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEE
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCI 145 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV 145 (561)
..|.||++.++.|+ +.++|+|=|+|-.+. . |.|.|+|
T Consensus 68 ~~l~~g~~~~~~f~-~~~~G~y~~~C~~~~---~-m~G~liV 104 (104)
T PF13473_consen 68 KVLPPGETATVTFT-PLKPGEYEFYCTMHP---N-MKGTLIV 104 (104)
T ss_dssp EEE-TT-EEEEEEE-E-S-EEEEEB-SSS----T-TB-----
T ss_pred EEECCCCEEEEEEc-CCCCEEEEEEcCCCC---c-ceecccC
Confidence 46899999999998 578999999999776 2 6777775
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.60 E-value=1e-07 Score=82.13 Aligned_cols=89 Identities=12% Similarity=0.030 Sum_probs=67.7
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC-cce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN-AGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn-pG~ 505 (561)
++.++.|+.|++.+.|.....+.+|.||...---...+|.. ... .-.|.||+..+.+|.++. +|.
T Consensus 27 tI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~-------~~~-------~~~i~pG~~~~Y~~~~~~~~Gt 92 (117)
T PF07732_consen 27 TIRVREGDTVRITVTNNLDEPTSIHWHGLHQPPSPWMDGVP-------GVT-------QCPIAPGESFTYEFTANQQAGT 92 (117)
T ss_dssp EEEEETTEEEEEEEEEESSSGBSEEEETSBSTTGGGGSGGT-------TTS-------GSSBSTTEEEEEEEEESSCSEE
T ss_pred EEEEEcCCeeEEEEEeccccccccccceeeeeeeeecCCcc-------ccc-------ceeEEeecceeeeEeeeccccc
Confidence 57789999999999999989999999996641100001100 000 123778999999999988 999
Q ss_pred eeeecccchhhhccceEEEEEecC
Q 046746 506 WNLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
|.||||...|...||...+.|++.
T Consensus 93 ~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 93 YWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp EEEEECSTTHHHTTEEEEEEEE-T
T ss_pred eeEeeCCCchhcCcCEEEEEEcCC
Confidence 999999999878999999999764
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.3e-05 Score=83.63 Aligned_cols=227 Identities=15% Similarity=0.232 Sum_probs=138.3
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCccc-EEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTM-KLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~-~via~DG~~~~p~~~~~v~l~pg 270 (561)
..++|||+.. .|.|+++.|+++.++++|-.. ..+.+|.+|-+. .--..||.++. .=.|.||
T Consensus 48 ~vi~iNG~fP------------GP~I~~~~gD~ivV~v~N~~~-~~~sihWhGv~q~kn~w~DG~~~T-----qCPI~Pg 109 (563)
T KOG1263|consen 48 QVITINGQFP------------GPTINAEEGDTIVVNVVNRLD-EPFSIHWHGVRQRKNPWQDGVYIT-----QCPIQPG 109 (563)
T ss_pred eeEeecCCCC------------CCeEEEEeCCEEEEEEEeCCC-CceEEEeccccccCCccccCCccc-----cCCcCCC
Confidence 4789999974 499999999999999999955 566777777543 33345994432 2368999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCcceeEE-EEEecCCCCCCCCCCCCCCCCc-----ccccc-ccccccccccccC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTVITTTA-IVRYSDSKGLASPDLPKAPVGW-----DWSLN-QFRSFRWNLTASA 343 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~a-il~y~~~~~~~~~~~p~~p~~~-----~~~~~-~~~~~~~~l~~~~ 343 (561)
|.|-.-++.++..|+||.+++..+.... ...+ ++.+.....+ .+.+..-.+. +|-.+ ....++..+....
T Consensus 110 ~~~tY~F~v~~q~GT~~yh~h~~~~Ra~-G~~G~liI~~~~~~p--~pf~~pd~E~~ill~dW~~~~~~~~l~~~~~~~~ 186 (563)
T KOG1263|consen 110 ENFTYRFTVKDQIGTLWYHSHVSWQRAT-GVFGALIINPRPGLP--VPFPKPDKEFTILLGDWYKNLNHKNLKNFLDRTG 186 (563)
T ss_pred CeEEEEEEeCCcceeEEEeecccccccc-CceeEEEEcCCccCC--CCCCCCCceeEEEeEeeccccCHHHHHHhhccCC
Confidence 9999999999889999999886533211 1233 3333222111 1222100010 11110 1111111000000
Q ss_pred CCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccc
Q 046746 344 ARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTL 423 (561)
Q Consensus 344 ~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 423 (561)
..|.+ .-...|||.+- ....
T Consensus 187 ~~p~~--------------------------~D~~~iNg~~g----------------------------------~~~~ 206 (563)
T KOG1263|consen 187 ALPNP--------------------------SDGVLINGRSG----------------------------------FLYN 206 (563)
T ss_pred CCCCC--------------------------CCceEECCCCC----------------------------------cccC
Confidence 00000 01134555430 1123
Q ss_pred cceEEecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeC
Q 046746 424 QPNVMDATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMD 501 (561)
Q Consensus 424 ~~~~~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~ad 501 (561)
|...+.+..|++..|+|.|.+ ...+ |.+=||.+.||..+ |.+. -|..-|++.|-+|++..+...||
T Consensus 207 ~~~~l~v~pGktY~lRiiN~g~~~~l~-F~I~~H~ltvVe~D-g~y~----------~p~~~~~l~i~~GQ~~~vLvtad 274 (563)
T KOG1263|consen 207 CTPTLTVEPGKTYRLRIINAGLNTSLN-FSIANHQLTVVEVD-GAYT----------KPFTTDSLDIHPGQTYSVLLTAD 274 (563)
T ss_pred ceeEEEEcCCCEEEEEEEccccccceE-EEECCeEEEEEEec-ceEE----------eeeeeceEEEcCCcEEEEEEeCC
Confidence 466788999999999999987 3445 99999999999996 3222 24456999999999999999997
Q ss_pred C-cc-eeeeecc
Q 046746 502 N-AG-MWNLRSN 511 (561)
Q Consensus 502 n-pG-~w~~HCH 511 (561)
. |+ .|+-=|=
T Consensus 275 q~~~~Y~i~~~~ 286 (563)
T KOG1263|consen 275 QSPGDYYIAASP 286 (563)
T ss_pred CCCCcEEEEEEe
Confidence 6 45 3554443
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.6e-06 Score=68.40 Aligned_cols=83 Identities=18% Similarity=0.289 Sum_probs=56.0
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc---cCCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG---TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
|-...|++++||+| +++|.-..++++.++...... ...+..+. ....+.||+++++.|.. +|+|.|||.
T Consensus 14 F~P~~i~v~~G~~V--~~~N~~~~~H~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pG~t~~~tF~~---~G~y~y~C~-- 85 (99)
T TIGR02656 14 FEPAKISIAAGDTV--EWVNNKGGPHNVVFDEDAVPA-GVKELAKSLSHKDLLNSPGESYEVTFST---PGTYTFYCE-- 85 (99)
T ss_pred EeCCEEEECCCCEE--EEEECCCCCceEEECCCCCcc-chhhhcccccccccccCCCCEEEEEeCC---CEEEEEEcC--
Confidence 33468999999986 556876666766665432110 00000000 02346899999999972 999999998
Q ss_pred hhhccCceeEEEEe
Q 046746 133 FHRAAGGFGGLCIH 146 (561)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (561)
.+...||.|.|+|+
T Consensus 86 ~H~~aGM~G~I~V~ 99 (99)
T TIGR02656 86 PHRGAGMVGKITVE 99 (99)
T ss_pred CccccCCEEEEEEC
Confidence 57778999999985
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.09 E-value=9.2e-06 Score=74.29 Aligned_cols=93 Identities=17% Similarity=0.198 Sum_probs=77.6
Q ss_pred ceEEecCCCcEEEEEEEcCCC-CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC-
Q 046746 425 PNVMDATYKAFMEIVLENRQN-TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN- 502 (561)
Q Consensus 425 ~~~~~~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn- 502 (561)
..++.++.|+++.|+|+|.+. ..+.|++.||+|+|++.++.. ..|...|++.|.+|+.+.+.++++.
T Consensus 59 ~~~~~v~~g~~~rlRliNa~~~~~~~~~i~gh~~~Via~DG~~-----------v~p~~~~~l~l~~G~R~dvlv~~~~~ 127 (159)
T PF00394_consen 59 PPVIKVKPGERYRLRLINAGASTSFNFSIDGHPMTVIAADGVP-----------VEPYKVDTLVLAPGQRYDVLVTADQP 127 (159)
T ss_dssp SGEEEEETTTEEEEEEEEESSS-BEEEEETTBCEEEEEETTEE-----------EEEEEESBEEE-TTEEEEEEEEECSC
T ss_pred cceEEEcCCcEEEEEEEeccCCeeEEEEeeccceeEeeecccc-----------ccccccceEEeeCCeEEEEEEEeCCC
Confidence 456889999999999999874 579999999999999996431 2267889999999999999999987
Q ss_pred cceeeeec----ccchhhhccceEEEEEec
Q 046746 503 AGMWNLRS----NIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 503 pG~w~~HC----Hil~H~d~GMm~~~~V~~ 528 (561)
+|.|.+++ +...+...|+...+.+.+
T Consensus 128 ~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~ 157 (159)
T PF00394_consen 128 PGNYWIRASYQHDSINDPQNGNALAILRYD 157 (159)
T ss_dssp SSEEEEEEEESSSSSHSHGGGTTEEEEEET
T ss_pred CCeEEEEEecccCCCccCCCcEEEEEEEEC
Confidence 99999999 666788889988887654
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.8e-05 Score=85.21 Aligned_cols=101 Identities=15% Similarity=0.091 Sum_probs=69.7
Q ss_pred EEecCCCeeeeE--EEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEE
Q 046746 38 GTISPLGIPQQG--ILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYY 115 (561)
Q Consensus 38 ~~~~~dG~~~~~--~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~ 115 (561)
..+.++|.+..+ ....-.|--+.|+|++||+|.++++|.-...-.+ ||+...+. | +..-+.||++.+..
T Consensus 532 ~~v~R~G~kv~Vym~a~a~~f~p~~i~Vk~GDeVt~~lTN~d~~~DVi--HGF~Ip~~----n---I~~dv~PG~t~svt 602 (635)
T PRK02888 532 SKVIRDGNKVRVYMTSQAPAFGLREFTVKQGDEVTVIVTNLDKVEDLT--HGFAIPNY----G---VNMEVAPQATASVT 602 (635)
T ss_pred cceEEeCCEEEEEEEEEecccCCceEEecCCCEEEEEEEeCCcccccc--cceeeccc----C---ccEEEcCCceEEEE
Confidence 446678766554 4556667566899999999999999943211122 45533211 1 12457899999999
Q ss_pred EEecCceeeeeEecCch-hhhccCceeEEEEecC
Q 046746 116 LQVKDQIGSYIYHPSTG-FHRAAGGFGGLCIHSR 148 (561)
Q Consensus 116 f~~~~~~Gt~wYH~H~~-~q~~~Gl~G~liV~~~ 148 (561)
|+ ++++|+|||||..- .....+|.|-|+|+++
T Consensus 603 F~-adkPGvy~~~CtefCGa~H~~M~G~~iVep~ 635 (635)
T PRK02888 603 FT-ADKPGVYWYYCTWFCHALHMEMRGRMLVEPK 635 (635)
T ss_pred EE-cCCCEEEEEECCcccccCcccceEEEEEEeC
Confidence 99 58899999999753 2222489999999873
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.7e-05 Score=61.96 Aligned_cols=76 Identities=13% Similarity=0.167 Sum_probs=52.9
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhh
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR 135 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (561)
|-.+.|++++||+| +++|.-..++++++....- ...+-. ...+.||+++++.|+ ++|+|-|||-.|.
T Consensus 8 F~P~~i~v~~GdtV--t~~N~d~~~Hnv~~~~g~~---~~~~~~---~~~~~~g~~~~~tf~---~~G~y~y~C~~Hp-- 74 (83)
T TIGR02657 8 YETPELHVKVGDTV--TWINREAMPHNVHFVAGVL---GEAALK---GPMMKKEQAYSLTFT---EAGTYDYHCTPHP-- 74 (83)
T ss_pred EcCCEEEECCCCEE--EEEECCCCCccEEecCCCC---cccccc---ccccCCCCEEEEECC---CCEEEEEEcCCCC--
Confidence 33578999999996 5678877778887654311 001100 123578888888775 5999999998765
Q ss_pred ccCceeEEEEe
Q 046746 136 AAGGFGGLCIH 146 (561)
Q Consensus 136 ~~Gl~G~liV~ 146 (561)
+|.|.++|+
T Consensus 75 --~M~G~v~V~ 83 (83)
T TIGR02657 75 --FMRGKVVVE 83 (83)
T ss_pred --CCeEEEEEC
Confidence 399999985
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.5e-05 Score=66.55 Aligned_cols=79 Identities=22% Similarity=0.387 Sum_probs=53.7
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCC------Cc-cCCccCCCCeEEEEEEecCceeeeeEe
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGV------LG-TNCPIPPGKNYTYYLQVKDQIGSYIYH 128 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv------~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 128 (561)
|-...|++++||+| ++.|.-..++++.+=-- ....|. +. ....+.||+++++.|+ ++|+|.|+
T Consensus 14 F~P~~i~V~~G~tV--~~~n~~~~~Hnv~~~~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~~tF~---~~G~y~y~ 83 (99)
T PF00127_consen 14 FDPSEITVKAGDTV--TFVNNDSMPHNVVFVAD-----GMPAGADSDYVPPGDSSPLLAPGETYSVTFT---KPGTYEYY 83 (99)
T ss_dssp EESSEEEEETTEEE--EEEEESSSSBEEEEETT-----SSHTTGGHCHHSTTCEEEEBSTTEEEEEEEE---SSEEEEEE
T ss_pred EeCCEEEECCCCEE--EEEECCCCCceEEEecc-----cccccccccccCccccceecCCCCEEEEEeC---CCeEEEEE
Confidence 33578999999985 46665444555554210 000110 00 0124789999999998 69999999
Q ss_pred cCchhhhccCceeEEEEe
Q 046746 129 PSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 129 ~H~~~q~~~Gl~G~liV~ 146 (561)
|- . +...||.|.|+|+
T Consensus 84 C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 84 CT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp ET-T-TGGTTSEEEEEEE
T ss_pred cC-C-CcccCCEEEEEEC
Confidence 99 4 8888999999996
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00015 Score=65.11 Aligned_cols=88 Identities=9% Similarity=-0.033 Sum_probs=58.1
Q ss_pred EEecCCCcEEEEEEEcCCC-CCCceeecCCceEE--EeecCCCCCcCCCCCCCCCCCCceeEEEeCC---C--cEEEEEE
Q 046746 427 VMDATYKAFMEIVLENRQN-TMQSWILDGYAFFA--VGMEPGTWNPDKRKSYNLIDAVSRYTIQVFP---N--CWAAILV 498 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~V--l~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~---~--g~~~irf 498 (561)
.+.++.|+.|++++.|.+. ..|.|-||.+.-.. .....|. |..-..-.+|+ | ++..+.|
T Consensus 53 ~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~-------------~~~~~~~i~p~~~~g~~~~~~~tf 119 (148)
T TIGR03095 53 TIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGL-------------GFVAGTGFLPPPKSGKFGYTDFTY 119 (148)
T ss_pred EEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCC-------------CccccCcccCCCCCCccceeEEEE
Confidence 4778999999999999864 66777776432210 0000000 11111112222 2 2467888
Q ss_pred EeCCcceeeeecccchhhhccceEEEEEe
Q 046746 499 SMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 499 ~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+++.+|.+.||||+..|...||-..+.|+
T Consensus 120 ~f~~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 120 HFSTAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred ECCCCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 88899999999999999999999998873
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00056 Score=61.58 Aligned_cols=95 Identities=18% Similarity=0.164 Sum_probs=69.4
Q ss_pred EEECCcCCC-CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCC-------CCCCCC----CccC------CccCCCCe
Q 046746 50 ILINGQFPG-PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKN-------SWQDGV----LGTN------CPIPPGKN 111 (561)
Q Consensus 50 ~~~Ng~~pg-P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~-------~~~DGv----~~~q------~~i~PG~~ 111 (561)
+-|||+..| ++|.+..|=+|.|+|.|.-..++++-. -+.++ ...||. +|.+ ..|.+|++
T Consensus 75 fNfnGts~G~mtIyiPaGw~V~V~f~N~e~~pHnl~i---v~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gqs 151 (195)
T TIGR03094 75 FNFNGTSYGAMTIYLPAGWNVYVTFTNYESLPHNLKL---LPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGHS 151 (195)
T ss_pred ccccCccCCceEEEEeCCCEEEEEEEcCCCCCccEEE---ecCCCCCCCccccccCceeEeecccccCccccccccccce
Confidence 667887766 799999999999999998655544432 22222 234664 2221 34678888
Q ss_pred EEEEEEecCceeeeeEecCchhhhccCceeEEEEecC
Q 046746 112 YTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSR 148 (561)
Q Consensus 112 ~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 148 (561)
..=.|+ +-++|+|||-|-...+..+||+|-+||-+.
T Consensus 152 ~sg~~~-~~~~G~YwlvCgipGHAesGMw~~lIVSs~ 187 (195)
T TIGR03094 152 RSGWWN-DTSAGKYWLVCGITGHAESGMWAVVIVSSN 187 (195)
T ss_pred eEEEec-cCCCeeEEEEcccCChhhcCcEEEEEEecC
Confidence 444444 578999999999999999999999999884
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00055 Score=63.03 Aligned_cols=100 Identities=21% Similarity=0.188 Sum_probs=71.6
Q ss_pred eEEEECCcCCC-CeEEecCCCEEEEEEEeCCCCCeee--eeCCccC--CCCCCCCCC----Ccc------CCccCCCCeE
Q 046746 48 QGILINGQFPG-PNINSTTNDNLVINVFNKLDEPFLL--TWPGIQH--KKNSWQDGV----LGT------NCPIPPGKNY 112 (561)
Q Consensus 48 ~~~~~Ng~~pg-P~i~v~~Gd~v~v~v~N~l~~~~~i--H~HG~~~--~~~~~~DGv----~~~------q~~i~PG~~~ 112 (561)
..+-|||..-| ++|.+..|-+|.|+|+|.-.-++++ =--+-.+ ......||. +|. ...|.+|++.
T Consensus 74 ~~~nfnGts~G~m~i~VPAGw~V~i~f~N~~~l~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~ 153 (196)
T PF06525_consen 74 NPFNFNGTSNGQMTIYVPAGWNVQITFTNQESLPHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSA 153 (196)
T ss_pred CceeeecccCCcEEEEEcCCCEEEEEEEcCCCCCeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCcee
Confidence 36788887655 7999999999999999985433322 2122111 112345553 111 2358899999
Q ss_pred EEEEEecCceeeeeEecCchhhhccCceeEEEEecC
Q 046746 113 TYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSR 148 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 148 (561)
.-.|. +-++|.|||=|-...|...||++-|+|.+.
T Consensus 154 ~~~~~-~l~aG~YwlvC~ipGHA~sGMw~~LiVs~~ 188 (196)
T PF06525_consen 154 SGVYN-DLPAGYYWLVCGIPGHAESGMWGVLIVSSN 188 (196)
T ss_pred eEEEc-cCCCceEEEEccCCChhhcCCEEEEEEecC
Confidence 87775 347999999999999999999999999984
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00058 Score=58.98 Aligned_cols=75 Identities=16% Similarity=0.164 Sum_probs=54.9
Q ss_pred CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhccC
Q 046746 59 PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAG 138 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 138 (561)
-.|+|++||+ |++.|.-...++++.-+.. ..+|.- .....+|+++++.|. .+|+|-|+|-. ++..|
T Consensus 54 A~v~v~pGDT--Vtw~~~d~~~Hnv~~~~~~-----~~~g~~--~~~~~~~~s~~~Tfe---~~G~Y~Y~C~P--H~~~g 119 (128)
T COG3794 54 AEVTVKPGDT--VTWVNTDSVGHNVTAVGGM-----DPEGSG--TLKAGINESFTHTFE---TPGEYTYYCTP--HPGMG 119 (128)
T ss_pred cEEEECCCCE--EEEEECCCCCceEEEeCCC-----Cccccc--ccccCCCcceEEEec---ccceEEEEecc--CCCCC
Confidence 3799999999 7788887777887765542 112221 233455688888887 49999999976 56789
Q ss_pred ceeEEEEec
Q 046746 139 GFGGLCIHS 147 (561)
Q Consensus 139 l~G~liV~~ 147 (561)
|.|.++|++
T Consensus 120 M~G~IvV~~ 128 (128)
T COG3794 120 MKGKIVVGE 128 (128)
T ss_pred cEEEEEeCC
Confidence 999999974
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00058 Score=57.00 Aligned_cols=82 Identities=15% Similarity=0.076 Sum_probs=58.8
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|+|+ |.+...|-+.++...+..-.. .+ ......+++.+.||....+.|.. ||.|
T Consensus 18 ~i~v~~G~~V~~~--N~~~~~H~~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~pG~t~~~tF~~--~G~y 80 (99)
T TIGR02656 18 KISIAAGDTVEWV--NNKGGPHNVVFDEDAVPAGVK---EL----------AKSLSHKDLLNSPGESYEVTFST--PGTY 80 (99)
T ss_pred EEEECCCCEEEEE--ECCCCCceEEECCCCCccchh---hh----------cccccccccccCCCCEEEEEeCC--CEEE
Confidence 5778999998885 777788888876543221100 00 00123467888999998887776 9999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||- .|...||...+.|.
T Consensus 81 ~y~C~--~H~~aGM~G~I~V~ 99 (99)
T TIGR02656 81 TFYCE--PHRGAGMVGKITVE 99 (99)
T ss_pred EEEcC--CccccCCEEEEEEC
Confidence 99998 69999999999873
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00088 Score=57.30 Aligned_cols=75 Identities=15% Similarity=0.137 Sum_probs=50.5
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeee-CCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTW-PGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRA 136 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~-HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 136 (561)
...|.|++||+|+....|. ++++.+ .+. .-+|... ..-.+|+++++.|+ ++|+|=|+|- .+..
T Consensus 14 P~~v~V~~GdTV~f~n~d~---~Hnv~~~~~~------~p~g~~~--~~s~~g~~~~~tF~---~~G~Y~Y~C~--pH~~ 77 (116)
T TIGR02375 14 PAYIRAAPGDTVTFVPTDK---GHNVETIKGM------IPEGAEA--FKSKINEEYTVTVT---EEGVYGVKCT--PHYG 77 (116)
T ss_pred CCEEEECCCCEEEEEECCC---CeeEEEccCC------CcCCccc--ccCCCCCEEEEEeC---CCEEEEEEcC--CCcc
Confidence 4689999999976665554 455443 221 1122211 11245777777775 5999999998 5678
Q ss_pred cCceeEEEEecC
Q 046746 137 AGGFGGLCIHSR 148 (561)
Q Consensus 137 ~Gl~G~liV~~~ 148 (561)
.||.|.++|.++
T Consensus 78 ~GM~G~V~Vg~~ 89 (116)
T TIGR02375 78 MGMVALIQVGDP 89 (116)
T ss_pred CCCEEEEEECCC
Confidence 899999999885
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00088 Score=58.33 Aligned_cols=60 Identities=13% Similarity=0.251 Sum_probs=50.3
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|+|.+.|.+...|.+-++++.+ ...++||+...++|.++-||.|
T Consensus 62 ~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi---------------------------s~~I~pGet~TitF~adKpG~Y 114 (135)
T TIGR03096 62 ALVVKKGTPVKVTVENKSPISEGFSIDAYGI---------------------------SEVIKAGETKTISFKADKAGAF 114 (135)
T ss_pred EEEECCCCEEEEEEEeCCCCccceEECCCCc---------------------------ceEECCCCeEEEEEECCCCEEE
Confidence 4678999999999999998888877766421 3457789999999999999999
Q ss_pred eeecccc
Q 046746 507 NLRSNIW 513 (561)
Q Consensus 507 ~~HCHil 513 (561)
.|||-+-
T Consensus 115 ~y~C~~H 121 (135)
T TIGR03096 115 TIWCQLH 121 (135)
T ss_pred EEeCCCC
Confidence 9999873
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0051 Score=52.49 Aligned_cols=75 Identities=20% Similarity=0.249 Sum_probs=50.8
Q ss_pred CCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCC-CCCccCCccCCCCeEEEEEEecCceeeeeEecCchh
Q 046746 56 FPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQD-GVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGF 133 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~D-Gv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 133 (561)
|-...|+|++||+|+ ++|+. ..++++..-+ +.. .| + .....+|++|+|.|. ++|+|=|+|-.
T Consensus 39 F~P~~ltV~~GdTVt--w~~~~d~~~HnV~s~~----~~~-f~s~----~~~~~~G~t~s~Tf~---~~G~Y~Y~C~p-- 102 (115)
T TIGR03102 39 FDPPAIRVDPGTTVV--WEWTGEGGGHNVVSDG----DGD-LDES----ERVSEEGTTYEHTFE---EPGIYLYVCVP-- 102 (115)
T ss_pred EeCCEEEECCCCEEE--EEECCCCCCEEEEECC----CCC-cccc----ccccCCCCEEEEEec---CCcEEEEEccC--
Confidence 334679999999955 66543 4556654311 001 11 1 123578999999996 59999999985
Q ss_pred hhccCceeEEEEe
Q 046746 134 HRAAGGFGGLCIH 146 (561)
Q Consensus 134 q~~~Gl~G~liV~ 146 (561)
+...||.|.|+|+
T Consensus 103 H~~~gM~G~I~V~ 115 (115)
T TIGR03102 103 HEALGMKGAVVVE 115 (115)
T ss_pred CCCCCCEEEEEEC
Confidence 4567899999985
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0055 Score=51.57 Aligned_cols=61 Identities=7% Similarity=0.139 Sum_probs=42.8
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.+.+++.|.+...|-|.+-+. . -...+++|+...+.|.++.||.|
T Consensus 36 ~i~v~~G~~v~l~~~N~~~~~h~~~i~~~--------------------------~-~~~~l~~g~~~~~~f~~~~~G~y 88 (104)
T PF13473_consen 36 TITVKAGQPVTLTFTNNDSRPHEFVIPDL--------------------------G-ISKVLPPGETATVTFTPLKPGEY 88 (104)
T ss_dssp EEEEETTCEEEEEEEE-SSS-EEEEEGGG--------------------------T-EEEEE-TT-EEEEEEEE-S-EEE
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEECCC--------------------------c-eEEEECCCCEEEEEEcCCCCEEE
Confidence 57789999999999999877666665541 1 23778899999999999999999
Q ss_pred eeecccch
Q 046746 507 NLRSNIWE 514 (561)
Q Consensus 507 ~~HCHil~ 514 (561)
-|+|-+-.
T Consensus 89 ~~~C~~~~ 96 (104)
T PF13473_consen 89 EFYCTMHP 96 (104)
T ss_dssp EEB-SSS-
T ss_pred EEEcCCCC
Confidence 99999643
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.024 Score=47.19 Aligned_cols=82 Identities=6% Similarity=-0.027 Sum_probs=54.8
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcC-CCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPD-KRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~-~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
..+.++.|++|.|+.. +...|.+.+=- . .+... +..... ..-.+..+.+|....+.|. .||
T Consensus 17 ~~i~V~~G~tV~~~n~--~~~~Hnv~~~~-------~---~~~~~~~~~~~~----~~~~~~~~~~G~~~~~tF~--~~G 78 (99)
T PF00127_consen 17 SEITVKAGDTVTFVNN--DSMPHNVVFVA-------D---GMPAGADSDYVP----PGDSSPLLAPGETYSVTFT--KPG 78 (99)
T ss_dssp SEEEEETTEEEEEEEE--SSSSBEEEEET-------T---SSHTTGGHCHHS----TTCEEEEBSTTEEEEEEEE--SSE
T ss_pred CEEEECCCCEEEEEEC--CCCCceEEEec-------c---cccccccccccC----ccccceecCCCCEEEEEeC--CCe
Confidence 3578899999888544 56667665422 1 11000 000001 1116777888998888877 899
Q ss_pred eeeeecccchhhhccceEEEEEe
Q 046746 505 MWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 505 ~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|.|+|- - |...||-..+.|+
T Consensus 79 ~y~y~C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 79 TYEYYCT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp EEEEEET-T-TGGTTSEEEEEEE
T ss_pred EEEEEcC-C-CcccCCEEEEEEC
Confidence 9999999 4 9999999999884
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.033 Score=48.10 Aligned_cols=72 Identities=13% Similarity=0.060 Sum_probs=51.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|+| .|.+...|.+.+.+... +. .+| ..+.+|+...+.|.. ||.|
T Consensus 48 ~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~---------~~-------------~~~-~~~~pg~t~~~tF~~--~G~y 100 (119)
T PRK02710 48 TLTIKAGDTVKW--VNNKLAPHNAVFDGAKE---------LS-------------HKD-LAFAPGESWEETFSE--AGTY 100 (119)
T ss_pred EEEEcCCCEEEE--EECCCCCceEEecCCcc---------cc-------------ccc-cccCCCCEEEEEecC--CEEE
Confidence 367889999887 57777888886543211 00 012 346778887777765 9999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|+|= .|...||-..+.|+
T Consensus 101 ~y~C~--~H~~~gM~G~I~V~ 119 (119)
T PRK02710 101 TYYCE--PHRGAGMVGKITVE 119 (119)
T ss_pred EEEcC--CCccCCcEEEEEEC
Confidence 99997 69889999999873
|
|
| >PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.18 Score=52.06 Aligned_cols=77 Identities=16% Similarity=0.124 Sum_probs=53.0
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc--CCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT--NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
.+--..+.+..|+ +.+.|+|....++..-.- +|+..+ ...|.||.+.++.+++ .+|+|-|+|-.+
T Consensus 40 ~c~p~~~tVpAG~-~~f~V~N~~~~~~Efe~~----------~~~~vv~e~EnIaPG~s~~l~~~L--~pGtY~~~C~~~ 106 (375)
T PRK10378 40 QCEPMTLTVNAGK-TQFIIQNHSQKALEWEIL----------KGVMVVEERENIAPGFSQKMTANL--QPGEYDMTCGLL 106 (375)
T ss_pred ccccCceeeCCCC-EEEEEEeCCCCcceEEee----------ccccccccccccCCCCceEEEEec--CCceEEeecCcC
Confidence 4445689999996 899999997655432111 121111 2468999999988776 599999999432
Q ss_pred hhhccCceeEEEEecC
Q 046746 133 FHRAAGGFGGLCIHSR 148 (561)
Q Consensus 133 ~q~~~Gl~G~liV~~~ 148 (561)
..+.|.++|...
T Consensus 107 ----~~~~g~l~Vtg~ 118 (375)
T PRK10378 107 ----TNPKGKLIVKGE 118 (375)
T ss_pred ----CCCCceEEEeCC
Confidence 335889999864
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.067 Score=58.37 Aligned_cols=75 Identities=11% Similarity=0.208 Sum_probs=55.8
Q ss_pred EEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc
Q 046746 427 VMDATYKAFMEIVLENRQ---NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA 503 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp 503 (561)
-+.++.|+.|.+.+.|.+ +..|-|-+-++.. -+.+.||....+.|.++.|
T Consensus 556 ~i~Vk~GDeVt~~lTN~d~~~DViHGF~Ip~~nI---------------------------~~dv~PG~t~svtF~adkP 608 (635)
T PRK02888 556 EFTVKQGDEVTVIVTNLDKVEDLTHGFAIPNYGV---------------------------NMEVAPQATASVTFTADKP 608 (635)
T ss_pred eEEecCCCEEEEEEEeCCcccccccceeecccCc---------------------------cEEEcCCceEEEEEEcCCC
Confidence 467899999999999964 5567666633322 1345688999999999999
Q ss_pred ceeeeecccchhh-hccceEEEEEec
Q 046746 504 GMWNLRSNIWERN-YLGQQLYLSVRL 528 (561)
Q Consensus 504 G~w~~HCHil~H~-d~GMm~~~~V~~ 528 (561)
|.|.+||...-|. |.+|...+.|++
T Consensus 609 Gvy~~~CtefCGa~H~~M~G~~iVep 634 (635)
T PRK02888 609 GVYWYYCTWFCHALHMEMRGRMLVEP 634 (635)
T ss_pred EEEEEECCcccccCcccceEEEEEEe
Confidence 9999999875433 347877777753
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.14 Score=41.06 Aligned_cols=71 Identities=8% Similarity=-0.032 Sum_probs=46.3
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.+..|++|.| .|.+...|-.+++...+ +..+ + ....+.++.... +.++.||.|
T Consensus 12 ~i~v~~GdtVt~--~N~d~~~Hnv~~~~g~~-------~~~~-------------~-~~~~~~~g~~~~--~tf~~~G~y 66 (83)
T TIGR02657 12 ELHVKVGDTVTW--INREAMPHNVHFVAGVL-------GEAA-------------L-KGPMMKKEQAYS--LTFTEAGTY 66 (83)
T ss_pred EEEECCCCEEEE--EECCCCCccEEecCCCC-------cccc-------------c-cccccCCCCEEE--EECCCCEEE
Confidence 477899999888 68777889988754221 0000 0 111234555554 455789999
Q ss_pred eeecccchhhhccceEEEEE
Q 046746 507 NLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V 526 (561)
.|||=+ |. .|-..+.|
T Consensus 67 ~y~C~~--Hp--~M~G~v~V 82 (83)
T TIGR02657 67 DYHCTP--HP--FMRGKVVV 82 (83)
T ss_pred EEEcCC--CC--CCeEEEEE
Confidence 999997 55 58877776
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.27 Score=42.08 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=31.5
Q ss_pred CCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCccc
Q 046746 490 PNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSL 533 (561)
Q Consensus 490 ~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~ 533 (561)
++.... +.++.||.+-|+|= .|...||-..+.|.++...+
T Consensus 54 ~g~~~~--~tF~~~G~Y~Y~C~--pH~~~GM~G~V~Vg~~~~n~ 93 (116)
T TIGR02375 54 INEEYT--VTVTEEGVYGVKCT--PHYGMGMVALIQVGDPPANL 93 (116)
T ss_pred CCCEEE--EEeCCCEEEEEEcC--CCccCCCEEEEEECCCCcCH
Confidence 455544 44578999999999 69999999999998864433
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.46 Score=42.19 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=64.3
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCC--CCeeee---------eCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCcee
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLD--EPFLLT---------WPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG 123 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH---------~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~G 123 (561)
.|++-.+.++.|++++..+.|.-. ...++- .|.... ..+++--.-...+.||++-+..|.. .++|
T Consensus 59 ~f~p~~~~v~aG~tv~~v~~n~~el~hef~~~~~~~~~~~~~~~~~~---~Dme~d~~~~v~L~PG~s~elvv~f-t~~g 134 (158)
T COG4454 59 SFKPSSFEVKAGETVRFVLKNEGELKHEFTMDAPDKNLEHVTHMILA---DDMEHDDPNTVTLAPGKSGELVVVF-TGAG 134 (158)
T ss_pred ccCCCcccccCCcEEeeeecCcccceEEEeccCccccchhHHHhhhC---CccccCCcceeEeCCCCcEEEEEEe-cCCc
Confidence 357778999999999999999742 222221 122211 2333322114569999999999996 5699
Q ss_pred eeeEecCchhhhccCceeEEEEec
Q 046746 124 SYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
.|=+-|-...++..||.|-|.|.+
T Consensus 135 ~ye~~C~iPGHy~AGM~g~itV~p 158 (158)
T COG4454 135 KYEFACNIPGHYEAGMVGEITVSP 158 (158)
T ss_pred cEEEEecCCCcccCCcEEEEEeCC
Confidence 999999999999999999998864
|
|
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.17 Score=44.82 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=66.0
Q ss_pred EecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcC-CCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 428 MDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPD-KRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~-~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
+.++.|++++.++.|.....|=|=+= ++....+ .+.-. ....... --..++.|.||....|-+.+.++|.+
T Consensus 65 ~~v~aG~tv~~v~~n~~el~hef~~~---~~~~~~~--~~~~~~~~~Dme~---d~~~~v~L~PG~s~elvv~ft~~g~y 136 (158)
T COG4454 65 FEVKAGETVRFVLKNEGELKHEFTMD---APDKNLE--HVTHMILADDMEH---DDPNTVTLAPGKSGELVVVFTGAGKY 136 (158)
T ss_pred ccccCCcEEeeeecCcccceEEEecc---Cccccch--hHHHhhhCCcccc---CCcceeEeCCCCcEEEEEEecCCccE
Confidence 45788999999999998777766553 2221111 01000 0000001 12479999999999999999999999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
-|-|-|-.|-+.||-..++|.
T Consensus 137 e~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 137 EFACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred EEEecCCCcccCCcEEEEEeC
Confidence 999999999999999999884
|
|
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.38 Score=41.55 Aligned_cols=74 Identities=11% Similarity=0.077 Sum_probs=49.2
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch-hhhc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-FHRA 136 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~ 136 (561)
.+.|.+..|+.|++++++. +.-+++...++. ++.-+-||+.....|+. +++|+|++.|..- ....
T Consensus 45 ~~~l~lp~g~~v~~~ltS~-DViHsf~ip~~~------------~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~gH 110 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSE-DVIHSFWIPELG------------IKMDAIPGRTNSVTFTP-DKPGTYYGQCAEYCGAGH 110 (120)
T ss_dssp SSEEEEETTSEEEEEEEES-SS-EEEEETTCT------------EEEEEBTTCEEEEEEEE-SSSEEEEEEE-SSSSTTG
T ss_pred cceecccccceEeEEEEcC-CccccccccccC------------cccccccccceeeeeee-ccCCcEEEcCccccCcCc
Confidence 5789999999999999995 222233322221 13446799999999995 7899999999743 2223
Q ss_pred cCceeEEEE
Q 046746 137 AGGFGGLCI 145 (561)
Q Consensus 137 ~Gl~G~liV 145 (561)
.-|.|-++|
T Consensus 111 ~~M~~~v~V 119 (120)
T PF00116_consen 111 SFMPGKVIV 119 (120)
T ss_dssp GG-EEEEEE
T ss_pred CCCeEEEEE
Confidence 336666654
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=92.95 E-value=2 Score=37.09 Aligned_cols=62 Identities=19% Similarity=0.311 Sum_probs=48.3
Q ss_pred ceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeec
Q 046746 215 PLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRF 294 (561)
Q Consensus 215 p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~ 294 (561)
..+.++.|+.++|++-+. .-.|.|.|.+..++ +.+-||+.-.+-++++ ++|.|+++++...
T Consensus 46 ~~l~lp~g~~v~~~ltS~--DViHsf~ip~~~~k----------------~d~~PG~~~~~~~~~~-~~G~y~~~C~e~C 106 (120)
T PF00116_consen 46 NELVLPAGQPVRFHLTSE--DVIHSFWIPELGIK----------------MDAIPGRTNSVTFTPD-KPGTYYGQCAEYC 106 (120)
T ss_dssp SEEEEETTSEEEEEEEES--SS-EEEEETTCTEE----------------EEEBTTCEEEEEEEES-SSEEEEEEE-SSS
T ss_pred ceecccccceEeEEEEcC--CccccccccccCcc----------------cccccccceeeeeeec-cCCcEEEcCcccc
Confidence 689999999999999984 44667788766544 3667899889999998 8999999998654
Q ss_pred c
Q 046746 295 T 295 (561)
Q Consensus 295 ~ 295 (561)
.
T Consensus 107 G 107 (120)
T PF00116_consen 107 G 107 (120)
T ss_dssp S
T ss_pred C
Confidence 3
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=91.23 E-value=1.2 Score=37.96 Aligned_cols=73 Identities=7% Similarity=-0.035 Sum_probs=46.7
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|+.+ .+...|-.. +.+.+.|+. ......+|+...+.| +.||.+
T Consensus 43 ~ltV~~GdTVtw~~~-~d~~~HnV~---------s~~~~~f~s--------------~~~~~~~G~t~s~Tf--~~~G~Y 96 (115)
T TIGR03102 43 AIRVDPGTTVVWEWT-GEGGGHNVV---------SDGDGDLDE--------------SERVSEEGTTYEHTF--EEPGIY 96 (115)
T ss_pred EEEECCCCEEEEEEC-CCCCCEEEE---------ECCCCCccc--------------cccccCCCCEEEEEe--cCCcEE
Confidence 467899999998433 234455442 222222321 111234566666666 689999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|+|= .|...||-..+.|+
T Consensus 97 ~Y~C~--pH~~~gM~G~I~V~ 115 (115)
T TIGR03102 97 LYVCV--PHEALGMKGAVVVE 115 (115)
T ss_pred EEEcc--CCCCCCCEEEEEEC
Confidence 99999 49999999999883
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=90.65 E-value=0.91 Score=43.05 Aligned_cols=78 Identities=9% Similarity=0.047 Sum_probs=56.1
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
+.+.++.|+.|++.+.+.+- .|.|. |-+-+ ...| +-||....+.|.++.||.
T Consensus 117 ~~l~vp~g~~v~~~~ts~DV-~Hsf~-------ip~~~-----------------~k~d---a~PG~~~~~~~~~~~~G~ 168 (201)
T TIGR02866 117 NELVVPAGTPVRLQVTSKDV-IHSFW-------VPELG-----------------GKID---AIPGQYNALWFNADEPGV 168 (201)
T ss_pred CEEEEEcCCEEEEEEEeCch-hhccc-------ccccC-----------------ceEE---ecCCcEEEEEEEeCCCEE
Confidence 45778999999999998653 35444 42211 1233 457889999999999999
Q ss_pred eeeecccchh-hhccceEEEEEecCCc
Q 046746 506 WNLRSNIWER-NYLGQQLYLSVRLHKR 531 (561)
Q Consensus 506 w~~HCHil~H-~d~GMm~~~~V~~~~~ 531 (561)
+...|--.-. .|..|...+.|.++++
T Consensus 169 y~~~c~e~cG~~h~~M~~~v~v~~~~~ 195 (201)
T TIGR02866 169 YYGYCAELCGAGHSLMLFKVVVVEREE 195 (201)
T ss_pred EEEEehhhCCcCccCCeEEEEEECHHH
Confidence 9999997432 3578888888887653
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=90.55 E-value=1.2 Score=38.68 Aligned_cols=74 Identities=11% Similarity=-0.059 Sum_probs=49.7
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.++++.|++|+| .|.+...|-.+.=+-. +|..-+++..-.+.....-|.. ||.+
T Consensus 55 ~v~v~pGDTVtw--~~~d~~~Hnv~~~~~~----------------------~~~g~~~~~~~~~~s~~~Tfe~--~G~Y 108 (128)
T COG3794 55 EVTVKPGDTVTW--VNTDSVGHNVTAVGGM----------------------DPEGSGTLKAGINESFTHTFET--PGEY 108 (128)
T ss_pred EEEECCCCEEEE--EECCCCCceEEEeCCC----------------------CcccccccccCCCcceEEEecc--cceE
Confidence 467899999999 7777667766542221 0111233333344565555555 9999
Q ss_pred eeecccchhhhccceEEEEEec
Q 046746 507 NLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~ 528 (561)
.|.|-. |..+||-..+.|++
T Consensus 109 ~Y~C~P--H~~~gM~G~IvV~~ 128 (128)
T COG3794 109 TYYCTP--HPGMGMKGKIVVGE 128 (128)
T ss_pred EEEecc--CCCCCcEEEEEeCC
Confidence 999987 89999999998853
|
|
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=89.37 E-value=2 Score=36.96 Aligned_cols=88 Identities=17% Similarity=0.086 Sum_probs=55.2
Q ss_pred CCCCeEEecC-CCEEEEEEEeCCCCCeeeeeCCccCCCCC--------------CCCCCCc----c---CCccCCCCeEE
Q 046746 56 FPGPNINSTT-NDNLVINVFNKLDEPFLLTWPGIQHKKNS--------------WQDGVLG----T---NCPIPPGKNYT 113 (561)
Q Consensus 56 ~pgP~i~v~~-Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~--------------~~DGv~~----~---q~~i~PG~~~~ 113 (561)
|--..|.|.. |..|.|+|+|.-..+-..--|.+-...+. ..|=+|- + ..-|.|||+.+
T Consensus 13 Fd~~~i~V~a~~k~vtv~l~h~G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~s 92 (125)
T TIGR02695 13 FNTKSISVPKSCKEFTVNLKHTGKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTS 92 (125)
T ss_pred ccccEEEEcCCCcEEEEEEecCCcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEE
Confidence 3346799998 48999999998533322222221111001 1111221 1 34589999999
Q ss_pred EEEEecC-ceee-eeEecCchhhhccCceeEEE
Q 046746 114 YYLQVKD-QIGS-YIYHPSTGFHRAAGGFGGLC 144 (561)
Q Consensus 114 Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~li 144 (561)
..|+++. ++|+ |-|-|-...+.. .|.|.|.
T Consensus 93 vtF~~~~l~~g~~Y~f~CSFPGH~~-~MkG~l~ 124 (125)
T TIGR02695 93 VTFDVSKLSAGEDYTFFCSFPGHWA-MMRGTVK 124 (125)
T ss_pred EEEECCCCCCCCcceEEEcCCCcHH-hceEEEe
Confidence 9999753 5786 999999877765 4888875
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=87.45 E-value=4.4 Score=37.76 Aligned_cols=95 Identities=16% Similarity=-0.016 Sum_probs=59.6
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCC----CCC--CCCCCCCceeEEEeCCCcEEEEEEEe
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDK----RKS--YNLIDAVSRYTIQVFPNCWAAILVSM 500 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~----~~~--~n~~~P~~rDTv~vp~~g~~~irf~a 500 (561)
.+.+|.|-.|.+++.|.+...|- |-|+..+........ .+. +--..+.--..--+++|.....-+..
T Consensus 87 ~i~VPAGw~V~i~f~N~~~l~Hn-------l~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~~~~~~~ 159 (196)
T PF06525_consen 87 TIYVPAGWNVQITFTNQESLPHN-------LVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSASGVYND 159 (196)
T ss_pred EEEEcCCCEEEEEEEcCCCCCee-------EEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCceeeEEEcc
Confidence 46689999999999998877664 555544322111100 000 00000100011233456666666666
Q ss_pred CCcceeeeecccchhhhccceEEEEEec
Q 046746 501 DNAGMWNLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 501 dnpG~w~~HCHil~H~d~GMm~~~~V~~ 528 (561)
-.||.+.|=|-+.-|...||-..+.|.+
T Consensus 160 l~aG~YwlvC~ipGHA~sGMw~~LiVs~ 187 (196)
T PF06525_consen 160 LPAGYYWLVCGIPGHAESGMWGVLIVSS 187 (196)
T ss_pred CCCceEEEEccCCChhhcCCEEEEEEec
Confidence 6799999999999999999999999854
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=84.76 E-value=10 Score=30.18 Aligned_cols=65 Identities=18% Similarity=0.301 Sum_probs=35.7
Q ss_pred EEEEEEEcCCCceEEEEEe-Cccc--EEEeecCcccc--------eeeeeeEEEcccceEEEEEEeCCC---CCceEEEE
Q 046746 225 YKYRICNVGVKTSLNFRIQ-GHTM--KLVEMEGSHVV--------QNEYESLDVHVGQCFTVLVTANQD---PKDYYLIA 290 (561)
Q Consensus 225 ~rlRliN~~~~~~~~~~i~-gh~~--~via~DG~~~~--------p~~~~~v~l~pgeR~dv~v~~~~~---~g~y~i~~ 290 (561)
..|.+.|.+. ..+.|.+. |+.+ .|...+|..+- -+......|.|||...+-.+.+.. +|.|.+.+
T Consensus 4 ~~l~v~N~s~-~~v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~~a 82 (82)
T PF12690_consen 4 FTLTVTNNSD-EPVTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPGEYTLEA 82 (82)
T ss_dssp EEEEEEE-SS-S-EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SEEEEEEE
T ss_pred EEEEEEeCCC-CeEEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCceEEEeC
Confidence 4677778777 33466664 5543 34444666552 134567899999999999888763 79998764
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=81.81 E-value=4.1 Score=39.82 Aligned_cols=82 Identities=10% Similarity=0.094 Sum_probs=57.1
Q ss_pred ceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 425 PNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 425 ~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
.+.+.++.|+.|++.+... +..|- |+|-+- +--+.+.||-...+.+.++.||
T Consensus 136 ~n~l~lPv~~~V~f~ltS~-DViHs-------F~IP~l--------------------~~k~d~iPG~~~~~~~~~~~~G 187 (247)
T COG1622 136 VNELVLPVGRPVRFKLTSA-DVIHS-------FWIPQL--------------------GGKIDAIPGMTTELWLTANKPG 187 (247)
T ss_pred cceEEEeCCCeEEEEEEec-hhcee-------EEecCC--------------------CceeeecCCceEEEEEecCCCe
Confidence 3457789999999988876 34454 444222 2333445678888999999999
Q ss_pred eeeeecccchhh-hccceEEEEEecCCccccc
Q 046746 505 MWNLRSNIWERN-YLGQQLYLSVRLHKRSLRD 535 (561)
Q Consensus 505 ~w~~HCHil~H~-d~GMm~~~~V~~~~~~~~~ 535 (561)
.+-.+|+..-=. |..|-..+.|+.+++ +++
T Consensus 188 ~Y~g~Cae~CG~gH~~M~~~v~vvs~~~-f~~ 218 (247)
T COG1622 188 TYRGICAEYCGPGHSFMRFKVIVVSQED-FDA 218 (247)
T ss_pred EEEEEcHhhcCCCcccceEEEEEEcHHH-HHH
Confidence 999999988543 445666777777655 644
|
|
| >COG4263 NosZ Nitrous oxide reductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=80.73 E-value=2.2 Score=44.44 Aligned_cols=78 Identities=17% Similarity=0.117 Sum_probs=50.0
Q ss_pred eEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch-hhhccC
Q 046746 60 NINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-FHRAAG 138 (561)
Q Consensus 60 ~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~G 138 (561)
+..|++||.|.+.++|-......+| |.-.. .-|+ ...+.|-++-.|.|. .+.+|.+||.|--. .-...-
T Consensus 559 ef~Vkq~DEVt~l~tnld~Ved~th--gfv~p----~~~v---~~~v~pq~tasvtf~-a~kpgv~w~ycs~fchalh~e 628 (637)
T COG4263 559 EFKVKQGDEVTVLTTNLDEVEDLTH--GFVIP----NYGV---NMEVKPQRTASVTFY-ADKPGVAWYYCSWFCHALHME 628 (637)
T ss_pred EEEEecCcEEEEEecccceeccccc--eeeec----cCce---EEEEccCCceEEEEE-ccCCeeeehhhhhHHHHHHHh
Confidence 5678888888888877654333333 32111 1111 245788999999998 47899999987533 233344
Q ss_pred ceeEEEEec
Q 046746 139 GFGGLCIHS 147 (561)
Q Consensus 139 l~G~liV~~ 147 (561)
|+|-++|+.
T Consensus 629 m~~rmlve~ 637 (637)
T COG4263 629 MAGRMLVEA 637 (637)
T ss_pred hccceeecC
Confidence 778888763
|
|
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=80.33 E-value=13 Score=34.12 Aligned_cols=96 Identities=13% Similarity=-0.059 Sum_probs=58.6
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCC-CcC---CCCCCCC--CCCCceeEEEeCCCcEEEEEEE
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTW-NPD---KRKSYNL--IDAVSRYTIQVFPNCWAAILVS 499 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~-~~~---~~~~~n~--~~P~~rDTv~vp~~g~~~irf~ 499 (561)
..+.++.|-.|.+++.|.+...|-+ -|+..+.... .+. +.+..+. ..|.--..=-+.+|......|.
T Consensus 85 mtIyiPaGw~V~V~f~N~e~~pHnl-------~iv~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gqs~sg~~~ 157 (195)
T TIGR03094 85 MTIYLPAGWNVYVTFTNYESLPHNL-------KLLPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGHSRSGWWN 157 (195)
T ss_pred eEEEEeCCCEEEEEEEcCCCCCccE-------EEecCCCCCCCccccccCceeEeecccccCccccccccccceeEEEec
Confidence 3466899999999999998777654 4444432111 000 0000000 0011001112334556566666
Q ss_pred eCCcceeeeecccchhhhccceEEEEEec
Q 046746 500 MDNAGMWNLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 500 adnpG~w~~HCHil~H~d~GMm~~~~V~~ 528 (561)
+-.||.+.+=|-+.-|...||-..+.|-.
T Consensus 158 ~~~~G~YwlvCgipGHAesGMw~~lIVSs 186 (195)
T TIGR03094 158 DTSAGKYWLVCGITGHAESGMWAVVIVSS 186 (195)
T ss_pred cCCCeeEEEEcccCChhhcCcEEEEEEec
Confidence 67899999999999999999999988753
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 561 | ||||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 1e-49 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 5e-24 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 5e-24 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 9e-24 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 1e-23 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 2e-23 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 2e-23 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 2e-23 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 1e-22 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 1e-21 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 1e-21 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 1e-21 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 1e-21 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 5e-21 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 9e-20 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 3e-19 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 2e-18 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 6e-18 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 5e-16 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 2e-14 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 3e-14 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 4e-14 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 5e-14 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 5e-13 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 1e-12 | ||
| 3g5w_A | 318 | Crystal Structure Of Blue Copper Oxidase From Nitro | 3e-07 | ||
| 2xu9_A | 439 | Crystal Structure Of Laccase From Thermus Thermophi | 6e-07 | ||
| 3zx1_A | 481 | Multicopper Oxidase From Campylobacter Jejuni: A Me | 1e-05 | ||
| 1kbw_A | 327 | Crystal Structure Of The Soluble Domain Of Ania Fro | 1e-05 |
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
| >pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 | Back alignment and structure |
|
| >pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 | Back alignment and structure |
|
| >pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 | Back alignment and structure |
|
| >pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From Neisseria Gonorrhoeae Length = 327 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 536 bits (1383), Expect = 0.0
Identities = 146/568 (25%), Positives = 246/568 (43%), Gaps = 51/568 (8%)
Query: 26 SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLT 84
S + W V Y +P + INGQFPGP I + D++V+ + NKL E ++
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 85 WPGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGL 143
W GI + W DG + C I PG+ + Y V D G++ YH G R+AG +G L
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSL 119
Query: 144 CIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG--KLLGKPDGVLINGKSG 201
+ P++ + + LL+ DW+ +S + L S + +G+P +L+NG+
Sbjct: 120 IVDPPQGKKEPFH--YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQ 177
Query: 202 RLDYDSDGKGDNE-------------PLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMK 248
+ N +F + K Y+ RI + +LNF I H +
Sbjct: 178 FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLL 237
Query: 249 LVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLI-ASTRFTR-TVITTTAIVR 306
+VE +G++V +D++ G+ ++VL+T +Q+P + Y + TR ++
Sbjct: 238 VVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLN 297
Query: 307 YSDSKGLASPDLPKAPVGWDW-SLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRL 365
Y + P P P W ++ ++F + +TA+ P P + NR I L
Sbjct: 298 YLPNSVSKLPTSPP-PQTPAWDDFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFL 349
Query: 366 ANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGI--------PEEVFKYNVISDKPADE 417
NT +++NG V++A+N VS TP A Y + P EVF + D P
Sbjct: 350 LNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN 409
Query: 418 IENVTLQPNVMDATYKAFMEIVLEN------RQNTMQSWILDGYAFFAVGMEPGTWNPDK 471
E + V ++++L+N + W L G+ F+ +G G ++ ++
Sbjct: 410 -EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE 468
Query: 472 RKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531
S NL + R T+ +FP W AI DN G+W +I ++G + + +
Sbjct: 469 ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-- 526
Query: 532 SLRDEYNMPDNALLCGIVANMSKPTPYS 559
+P AL CG A P +
Sbjct: 527 ---KVGRIPTKALACGGTAKSLINNPKN 551
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 268 bits (686), Expect = 2e-83
Identities = 111/496 (22%), Positives = 186/496 (37%), Gaps = 70/496 (14%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLT-----W 85
T +T +SP G + GIL+NG GP I NDN +NV N LD P +L W
Sbjct: 7 DTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHW 65
Query: 86 PGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLC 144
G+ + +W DG G CPI PG + Y G++ YH G G G +
Sbjct: 66 HGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMV 125
Query: 145 IHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLD 204
I+ + +++ + + DWY + +PD LINGK GR
Sbjct: 126 IYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGA-------AQPDATLINGK-GRYV 177
Query: 205 YDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYES 264
+ + ++ GK Y+ R+ ++ + F I GH + ++E++G + +
Sbjct: 178 GGPAAEL---SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDR 234
Query: 265 LDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVI-------TTTAIVRYSDSKGLASPD 317
L + GQ ++ ++ ANQ +Y++ A R + +AI+RY+ A+
Sbjct: 235 LQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAG----AANA 290
Query: 318 LPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVR 377
P + + L AA P G +N +L + R
Sbjct: 291 DPTTSANPNPAQLNEADLH-ALIDPAAPGIPT----PGAADVNLRFQLGFSGG------R 339
Query: 378 FAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFME 437
F +NG +Y + P G A ++ +V + +E
Sbjct: 340 FTINGTAYESPSVPTLLQIMSG---------------AQSANDLLPAGSVYELPRNQVVE 384
Query: 438 IVLENRQNTMQS----WILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPN-C 492
+V+ + + L G+AF V + +YN ++ V R + +
Sbjct: 385 LVV---PAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGD 434
Query: 493 WAAILVSMDNAGMWNL 508
I DN G W
Sbjct: 435 EVTIRFVTDNPGPWFF 450
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 254 bits (652), Expect = 3e-78
Identities = 104/511 (20%), Positives = 174/511 (34%), Gaps = 62/511 (12%)
Query: 10 LICFLAAATSGLVEAGSPTFFFTWNVTYGTISPLGI-PQQGILINGQFPGPNINSTTNDN 68
L + + + L A + ++ + P G + + G P I +D
Sbjct: 7 LKSLVVLSLTSLSLAATVAL--DLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDR 64
Query: 69 LVINVFNKLDEPFLLT-----WPGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQI 122
INV ++L + + W G + DG CPI P +++ Y V Q
Sbjct: 65 FQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQA 124
Query: 123 GSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDD--FTLLIGDWYTRSHVELGK 180
G+Y YH G G ++ + P + DD + I DWY L
Sbjct: 125 GTYWYHSHLSTQYCDGLRGAFVVYDPND-PHLSL-YDVDDASTVITIADWYHSLSTVLFP 182
Query: 181 QLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNF 240
K PD LING ++ + ++++GK Y++RI + + F
Sbjct: 183 N--PNKAPPAPDTTLINGLGR---NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAF 237
Query: 241 RIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIA---STRFTRT 297
I GH M ++E++G +SL + GQ ++V+V ANQ +Y++ A + R T
Sbjct: 238 SIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFT 297
Query: 298 VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGI 357
+AI RY A+ P +LN+ NL P
Sbjct: 298 GGINSAIFRYQG----AAVAEPTTSQNSGTALNEA-----NLIPLINPGAPGNPV----- 343
Query: 358 PINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADE 417
P I L F +NG ++ P+ G+ ++
Sbjct: 344 PGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGV------------TNPND 391
Query: 418 IENVTLQPNVMDATYKAFMEIVLENRQNTMQ-SWILDGYAFFAVGMEPGTWNPDKRKSYN 476
+ V+ +EI + + L G+ F V + YN
Sbjct: 392 LLPGG---AVISLPANQVIEISI---PGGGNHPFHLHGHNFDVVRTPGSS-------VYN 438
Query: 477 LIDAVSRYTIQVFPN-CWAAILVSMDNAGMW 506
++ V R + + DN G W
Sbjct: 439 YVNPVRRDVVSIGGGGDNVTFRFVTDNPGPW 469
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 253 bits (649), Expect = 3e-77
Identities = 117/495 (23%), Positives = 184/495 (37%), Gaps = 55/495 (11%)
Query: 28 TFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWP 86
T + +V TI+P G + + NG PGP I + DNL+I+V N L + W
Sbjct: 67 TREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWH 126
Query: 87 GIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCI 145
GI+ + DGV G T CPI PG TY QV Q G+ YH G FG L I
Sbjct: 127 GIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLII 185
Query: 146 HSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGK-----S 200
+ + ED + + DW S E+ G + L+NG S
Sbjct: 186 NGPATADYD-----EDVGVIFLQDWAHESVFEIWDTARLG-APPALENTLMNGTNTFDCS 239
Query: 201 GRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQN 260
D + G G T G Y+ R+ NVG+ + F I HT+ ++ + +V
Sbjct: 240 ASTDPNCVGGGKK-FELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPY 298
Query: 261 EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTV----ITTTAIVRYSDSKGLASP 316
++L + +GQ + V+V AN +Y++ + T + T I+RY S
Sbjct: 299 TTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPT 358
Query: 317 DLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKV 376
+ P G +L A S +
Sbjct: 359 SVGTTPRGTCEDEPVA-----SLVPHLALDVGGYSLVDEQVSSA-----------FTNYF 402
Query: 377 RFAVNGVSYVNSETPLKFAEYYGIPEEVF--KYNVISDKPADEIENVTLQPNVMDATYKA 434
+ +N S + + + + +F +YNV++ + + E
Sbjct: 403 TWTINSSSLLLDWSSPTTLKIFNNE-TIFPTEYNVVALEQTNANEEWV------------ 449
Query: 435 FMEIVLENRQNTMQS--WILDGYAFFAVGMEPGTWNPDK-RKSYNLIDAVSRYTIQVFPN 491
V+E+ L G+ FF V E +N D+ +NL++ R + N
Sbjct: 450 --VYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN 507
Query: 492 CWAAILVSMDNAGMW 506
+ AI +DN G W
Sbjct: 508 GYLAIAFKLDNPGSW 522
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 250 bits (640), Expect = 9e-77
Identities = 99/491 (20%), Positives = 164/491 (33%), Gaps = 63/491 (12%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLT-----W 85
++ I P G + + G FPGP I DN I FN+L E +L W
Sbjct: 7 TDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHW 66
Query: 86 PGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLC 144
G K +W DG T CPI G +++Y V G+Y YH G G
Sbjct: 67 HGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFV 126
Query: 145 IHS-RSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRL 203
++ Y+ +D + + DWY E+G D LI+G
Sbjct: 127 VYDPNDPDANLYD-VDDDTTIITLADWYHVLAKEMGAGGAIT-----ADSTLIDGLGR-- 178
Query: 204 DYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYE 263
+ + T++ GK Y+ R+ ++ + +F I GH M ++E +G + +
Sbjct: 179 -THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVD 237
Query: 264 SLDVHVGQCFTVLVTANQDPKDYYLIA---STRFTRTVITTTAIVRYSDSKGLASPDLPK 320
+ + Q ++ ++ ANQ +Y++ A S +AI+RY +
Sbjct: 238 EIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGAT-------TA 290
Query: 321 APVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAV 380
PV +++ +L + P G P L F +
Sbjct: 291 DPVTVASTVHTKCLIETDLHPLSRNGVP-------GNPHQGGADCNLNLSLGFACGNFVI 343
Query: 381 NGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVL 440
NGVS+ P+ G ++ +V+ + +EI L
Sbjct: 344 NGVSFTPPTVPVLLQICSGANTA---------------ADLLPSGSVISLPSNSTIEIAL 388
Query: 441 ENRQNTMQSWI----LDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNC-WAA 495
L G+ F + N D + R + +
Sbjct: 389 ---PAGAAGGPHPFHLHGHDFAVSESASNST-------SNYDDPIWRDVVSIGGVGDNVT 438
Query: 496 ILVSMDNAGMW 506
I DN G W
Sbjct: 439 IRFCTDNPGPW 449
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 1e-76
Identities = 106/492 (21%), Positives = 177/492 (35%), Gaps = 64/492 (13%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLT-----W 85
+T +SP G +Q +++NG PGP + D +NV + L +L W
Sbjct: 6 ADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHW 65
Query: 86 PGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLC 144
G +W DG CPI PG ++ Y QV DQ G++ YH G G
Sbjct: 66 HGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFV 125
Query: 145 IHSRSVVPVPYNR-FVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRL 203
++ + P DD + + DWY + + G D LINGK GR
Sbjct: 126 VYDPND-PHASRYDVDNDDTVITLADWYHTAA------KLGPRFPGGADATLINGK-GRA 177
Query: 204 DYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYE 263
DS + + GK Y++R+ ++ + F I GH + ++E++ + E +
Sbjct: 178 PSDSVAELSV---IKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234
Query: 264 SLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVI---TTTAIVRYSDSKGLASPDLPK 320
S+ + Q ++ ++ ANQ +Y++ A+ F +AI+RY + P +
Sbjct: 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPA-VEPTTNQ 293
Query: 321 APVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAV 380
+L + P P +++ I N A NG F +
Sbjct: 294 TTSVKPL-------NEVDLHPLVSTPVPGAPSS---GGVDKAI---NMAFNFNG-SNFFI 339
Query: 381 NGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVL 440
NG S+V P+ G +++ +V A +EI
Sbjct: 340 NGASFVPPTVPVLLQILSGAQTA---------------QDLLPSGSVYVLPSNASIEISF 384
Query: 441 ENRQNTMQS---WILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVF---PNCWA 494
+ + L G+ F V T YN + + R +
Sbjct: 385 PATAAAPGAPHPFHLHGHTFAVVRSAGST-------VYNYDNPIFRDVVSTGTPAAGDNV 437
Query: 495 AILVSMDNAGMW 506
I +N G W
Sbjct: 438 TIRFDTNNPGPW 449
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 239 bits (612), Expect = 3e-72
Identities = 107/506 (21%), Positives = 167/506 (33%), Gaps = 75/506 (14%)
Query: 28 TFFFTWNVTYGTISPLGI-PQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTW 85
T F W + + G+ + I NGQFP P+I D + I + N + + + +
Sbjct: 2 THTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHF 61
Query: 86 PGIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLC 144
G+ + DGV T CPI PG Y V +G+Y YH T G G
Sbjct: 62 HGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFI 121
Query: 145 IHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLL----GKPDGVLINGKS 200
I S PY+ +++ +L + +WY +L K S P +++N
Sbjct: 122 IKDDSF---PYD--YDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNT- 175
Query: 201 GRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQN 260
L + ++ Y RI NVG S F I+ H M +VE++G +N
Sbjct: 176 MNLT------------WEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKN 223
Query: 261 EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTV--------ITTTAIVRYSDSKG 312
+ L + V Q +TVLV D + I + + T+ + Y+
Sbjct: 224 VTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYN---- 279
Query: 313 LASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLV 372
+ LP D N F L H I + + N
Sbjct: 280 -KTAALP-TQNYVDSIDNFLDDF--YLQPYEKEAIYGEPDH----VITVDVVMDNLK--- 328
Query: 373 NGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATY 432
NG N ++Y + P A+ E +
Sbjct: 329 NGVNYAFFNNITYTAPKVPTLMTVLSS------------GDQANNSEIYGSNTHTFILEK 376
Query: 433 KAFMEIVLENRQNTMQS---WILDGYAFFAVGMEPGTWNPD---------KRKSYNLIDA 480
+EIVL N + L G+AF + + +
Sbjct: 377 DEIVEIVL---NNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYP 433
Query: 481 VSRYTIQVFPNCWAAILVSMDNAGMW 506
+ R T+ V P I DN G+W
Sbjct: 434 MRRDTLYVRPQSNFVIRFKADNPGVW 459
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 227 bits (581), Expect = 2e-67
Identities = 105/502 (20%), Positives = 166/502 (33%), Gaps = 60/502 (11%)
Query: 28 TFFFTWNVTYGTISPLGIPQQGIL-INGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTW 85
++ F + P G+ ++ ++ ING GPNI + D + + V N L + W
Sbjct: 35 SYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHW 94
Query: 86 PGIQHKKNSWQDGVLG-TNCPIPP-GKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGL 143
GI K + DG G T CPIPP G TY + Q G+ YH G G +
Sbjct: 95 HGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTI 153
Query: 144 CIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRL 203
I+ + +P D I D+Y R+ +L + D VLING
Sbjct: 154 QINGPASLPYDI-----DLGVFPITDYYYRAADDLVHFTQNNAPPF-SDNVLINGT-AVN 206
Query: 204 DYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYE 263
+G+ N T+ GK ++ RI N + + HTM ++ + V +
Sbjct: 207 PNTGEGQYAN---VTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVD 263
Query: 264 SLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTV-----ITTTAIVRYSDSKGLASPDL 318
SL + VGQ + V++ A++ P +Y+ + AI Y+ A L
Sbjct: 264 SLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAG----APGGL 319
Query: 319 PKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRF 378
P + ++ R P SF + L T +
Sbjct: 320 PTDEGTPPVDHQCLDTL--DVRPVVPRSVPVNSF-VKRPDNTLPVALDLTG---TPLFVW 373
Query: 379 AVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEI 438
VNG P + + P V +
Sbjct: 374 KVNGSDINVDWGK---------PIIDYILTGNTSYP-------VSDNIVQVDAVDQWTYW 417
Query: 439 VLENRQNTMQSWI----LDGYAFFAVGMEPGTWNPDKR----------KSYNLIDAVSRY 484
++EN S L G+ F +G P ++ N + R
Sbjct: 418 LIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRD 477
Query: 485 TIQVFPNCWAAILVSMDNAGMW 506
T + W + DN G W
Sbjct: 478 TTMLPAGGWLLLAFRTDNPGAW 499
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 3e-51
Identities = 73/352 (20%), Positives = 121/352 (34%), Gaps = 32/352 (9%)
Query: 31 FTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQ 89
F + TI G+ + NGQ PGP I+ D++++NV N P + W G+
Sbjct: 6 FDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVH 65
Query: 90 HKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA---GGFGGLCI 145
K DGV G T PI G +YTY + D+IG+ YH + G +G L +
Sbjct: 66 QKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIV 124
Query: 146 HSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDY 205
+ P+P + V D +++ W K + G + D +N KS
Sbjct: 125 DPKQ--PLPIEKRVTKDVIMMMSTWE---SAVADKYGEGGTPMNVADYFSVNAKSF---- 175
Query: 206 DSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYE-S 264
+PL +K G V K R G GH M + +G + Y +
Sbjct: 176 -----PLTQPL-RVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDGLPLDSPYYADT 228
Query: 265 LDVHVGQCFTVLVTANQDPKDYYLIASTRF-----TRTVITTTAIVRYSDSKGLASPDLP 319
+ V G+ + V++ A+ P + + ++ Y
Sbjct: 229 VLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVPVDDWYVWK 287
Query: 320 KAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHL 371
++ ++ +G F R + A H
Sbjct: 288 DKDYDPNFFYSESLK---QGYGMFDHDGFKGEFEQRQRRPGRKLAAALEHHH 336
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 6e-50
Identities = 61/307 (19%), Positives = 111/307 (36%), Gaps = 33/307 (10%)
Query: 31 FTWNVTYGTISPLGIPQQGIL-INGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQ 89
F ++ I +G NGQ P P I+ D++ +NV N P + W G+
Sbjct: 5 FDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGML 64
Query: 90 HKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGG---FGGLCI 145
+ DGV T I PG +TY + + G+ YH + +G L +
Sbjct: 65 QRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIV 123
Query: 146 HSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDY 205
++ P+P + V D+ L++ DW K + G D IN KS
Sbjct: 124 EPKN--PLPIEKTVTKDYILMLSDWV---SSWANKPGEGGIPGDVFDYYTINAKSF---- 174
Query: 206 DSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ-NEYES 264
+ +P +K G V + R+ G GH ++ +G + + + ++
Sbjct: 175 -----PETQP-IRVKKGDVIRLRLIGAGD-HVHAIHTHGHISQIAFKDGFPLDKPIKGDT 227
Query: 265 LDVHVGQCFTVLVTANQDPKDYYLIA-----STRFTRTVITTTAIVRY----SDSKGLAS 315
+ + G+ + V++ + P + + +T + + Y D
Sbjct: 228 VLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVGIDHPFYVW 286
Query: 316 PDLPKAP 322
D P
Sbjct: 287 KDKKFVP 293
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 5e-35
Identities = 80/495 (16%), Positives = 152/495 (30%), Gaps = 94/495 (18%)
Query: 21 LVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEP 80
+V + + T ++ G + G FPGP + D + + + N+L EP
Sbjct: 9 VVRSQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEP 68
Query: 81 FLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQI-GSYIYHP----STGFHR 135
L W G+ + D IPPG+++TY V ++ G++ YHP
Sbjct: 69 TNLHWHGLPI--SPKVDDPF---LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQL 123
Query: 136 AAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVL 195
AG G L + S + +P R ++ L++ D + + D VL
Sbjct: 124 FAGLLGALVVESS-LDAIPELREA-EEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVL 181
Query: 196 INGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGS 255
+NG P + R+ N +Q H + L+ +G
Sbjct: 182 VNGAL-------------RPTLVA-QKATLRLRLLNASNARYYRLALQDHPLYLIAADGG 227
Query: 256 HVVQ-NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLA 314
+ + E L + G+ VLV ++ + + + ++ +G +
Sbjct: 228 FLEEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPS 287
Query: 315 SPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIP---INRTIRLANTAHL 371
P+ + P P+ + +P + R + L
Sbjct: 288 RPETLLYLIA--------------PKNPKPLPLPKALSPFPTLPAPVVTRRLVLTED--- 330
Query: 372 VNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDAT 431
RF +NG + + LK A +E
Sbjct: 331 -MMAARFFINGQVFDHRRVDLKG-------------------QAQTVE------------ 358
Query: 432 YKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPN 491
+EN+ + + L + F + + + K D + +
Sbjct: 359 -----VWEVENQGDMDHPFHLHVHPFQVLSVGGRPFPYRAWK-----D-----VVNLKAG 403
Query: 492 CWAAILVSMDNAGMW 506
A +LV + G
Sbjct: 404 EVARLLVPLREKGRT 418
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 6e-29
Identities = 46/250 (18%), Positives = 88/250 (35%), Gaps = 37/250 (14%)
Query: 44 GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG-T 102
GI +G NG+ PGP + + D L I+ N P + + G+ + DG G
Sbjct: 51 GIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIG 107
Query: 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPST---GFHRAAGGFGGLCIHSRSVVPVPYNRFV 159
I PG+++TY G+++YH H A G +GG + + P
Sbjct: 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-----PA 161
Query: 160 EDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTM 219
+D+ +++ + T + + +NG + P+ +
Sbjct: 162 DDEMVMVMNGYNTDGGDD-------------NEFYSVNGLP--------FHFMDFPV-KV 199
Query: 220 KAGKVYKYRICNVGVKTSLN-FRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVT 278
K ++ + + NV +N F I G+ +++ GQ + +
Sbjct: 200 KQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELR 259
Query: 279 ANQDPKDYYL 288
P +
Sbjct: 260 FPY-PGKFMF 268
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 7e-27
Identities = 44/322 (13%), Positives = 95/322 (29%), Gaps = 45/322 (13%)
Query: 25 GSPTFFFTWNVTYGT--ISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFL 82
G +++ + T + P + +G PGP V+ N + P
Sbjct: 33 GQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNS 92
Query: 83 LTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHP----STGFHRAAG 138
+ G + DG PG YY + + YH T + G
Sbjct: 93 VHLHGSFS--RAAFDGW--AEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRG 148
Query: 139 GFGGLCIHSR--SVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDS-GKLLGKPDGVL 195
G + + +P + + E D +++ ++ L G D +
Sbjct: 149 QAGLYMLTDPAEDALNLP-SGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWG--DVIH 205
Query: 196 INGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHT-------MK 248
+NG+ P ++ + Y++R + V S K
Sbjct: 206 VNGQP-------------WPFKNVE-PRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK 251
Query: 249 LVEMEGSHVVQ-NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVI-------T 300
++ + + + L + + + + V+ + + + + I
Sbjct: 252 VIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDN 311
Query: 301 TTAIVRYSDSKGLASPDLPKAP 322
T ++R+ + PD P
Sbjct: 312 TDKVMRFVVADDTTQPDTSVVP 333
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 1e-24
Identities = 59/335 (17%), Positives = 109/335 (32%), Gaps = 47/335 (14%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNY 112
P I + + + NKL EP ++ W G N D + I PG++Y
Sbjct: 32 AEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDV--NWHNDAH--PSFAITPGESY 87
Query: 113 TYYLQVKDQIGSYIYHP----STGFHRAAGGFGGLCIHSR-SVVPVPYNRFVEDDFTLLI 167
Y V ++ G+Y+YHP T G G + + S + Y +D L+I
Sbjct: 88 NYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKY---GVNDLPLVI 144
Query: 168 GDWYTRSHVELGKQLDSGKLLGKP-DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYK 226
D + + G + VL+NG + +F + G Y+
Sbjct: 145 SDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-------------DAVFKLSGGS-YR 190
Query: 227 YRICNVGVKTSLNFRIQGHT-----MKLVEMEGSHVVQ-NEYESLDVHVGQCFTVLVTAN 280
R+ N I M+L+ ++ + + E +L + + V+V
Sbjct: 191 LRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG 250
Query: 281 QDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLT 340
+ YL+ +T F + ++ + +G G ++
Sbjct: 251 EGV---YLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP---------- 297
Query: 341 ASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGK 375
A +P + L+ +NG
Sbjct: 298 -VEALSDPPPEPPKPTRTRRFALSLSGMQWTINGM 331
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 1e-24
Identities = 83/491 (16%), Positives = 151/491 (30%), Gaps = 85/491 (17%)
Query: 24 AGSPTFFFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFL 82
F T + I + G NG P P I D L I V NKL E
Sbjct: 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATT 105
Query: 83 LTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQV-KDQIGSYIYHP----STGFHRAA 137
+ W G+ QDG + PI G+ Y ++ +D G+Y YHP +
Sbjct: 106 IHWHGVPV--PPDQDGS--PHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFM 161
Query: 138 GGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGK-PDGVLI 196
G G I ++ + + + + L+I D + ++ + L G+ + VLI
Sbjct: 162 GLAGAFVIKAKK-DALSHLK----EKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLI 216
Query: 197 NGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH 256
NG+ +K + RI N LN RIQG LV +G
Sbjct: 217 NGQ---------------FKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGL 261
Query: 257 VVQ-NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLAS 315
+ + E L + VL+ A +D ++ L ++ ++ +
Sbjct: 262 IEKTIYKEELFLSPASRVEVLIDAPKD-GNFKLESAYYDRDKMMVKEEPNTLFLANINLK 320
Query: 316 PDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGK 375
+ + P ++ + + + + + ++ + + +
Sbjct: 321 KENVELP----------KNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALA 370
Query: 376 VRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAF 435
F +N SY L +E
Sbjct: 371 SMFLINRKSYDLKRIDLSS-------------------KLGVVE---------------- 395
Query: 436 MEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAA 495
+ ++ N+ + + + G F + + R TI V PN
Sbjct: 396 -DWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAE------FRALRDTINVRPNEELR 448
Query: 496 ILVSMDNAGMW 506
+ + D G+
Sbjct: 449 LRMKQDFKGLR 459
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 105 bits (262), Expect = 3e-24
Identities = 45/247 (18%), Positives = 87/247 (35%), Gaps = 29/247 (11%)
Query: 52 INGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKN 111
ING++ GP I D++ + N+L E +T G+Q G + P +
Sbjct: 43 INGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVP--GPLMGG--PARMMSPNAD 98
Query: 112 YTYYLQVKDQIGSYIYHP----STGFHRAAGGFGGLCIHSRSVVPVPY-NRFVEDDFTLL 166
+ L ++ + YH T G G + +P N + DDF ++
Sbjct: 99 WAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVI 158
Query: 167 IGDWYTRSHVELG-KQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVY 225
I D + + SG +G D +L+NG P + G V
Sbjct: 159 IQDKRLDNFGTPEYNEPGSGGFVG--DTLLVNGVQ-------------SPYVEVSRGWV- 202
Query: 226 KYRICNVGVKTSLNFRI-QGHTMKLVEMEGSHVVQ-NEYESLDVHVGQCFTVLVTANQDP 283
+ R+ N ++ G + ++ + + + L + G+ +LV + +
Sbjct: 203 RLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMS-NG 261
Query: 284 KDYYLIA 290
+ +
Sbjct: 262 DEVSITC 268
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 98.1 bits (244), Expect = 6e-22
Identities = 58/269 (21%), Positives = 99/269 (36%), Gaps = 28/269 (10%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQH 90
+ G + G NG GP + + ++++N+L E L W G++
Sbjct: 20 IQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV 79
Query: 91 KKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHP----STGFHRAAGGFGGLCIH 146
DG IPPG + L V + +HP TG A G G + I
Sbjct: 80 --PGEVDGG--PQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIE 135
Query: 147 SRSVVPVPY-NRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDG--VLINGKSGRL 203
++ + ++ DD +++ D + ++ QLD G +L NG
Sbjct: 136 DDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA---- 191
Query: 204 DYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI-QGHTMKLVEMEGSHVVQ-NE 261
P G + + R+ N SLNF + ++ +G + + +
Sbjct: 192 ---------IYPQHAAPRGWL-RLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVK 241
Query: 262 YESLDVHVGQCFTVLVTANQDPKDYYLIA 290
L V +G+ F VLV N D K + L+
Sbjct: 242 VSELPVLMGERFEVLVEVN-DNKPFDLVT 269
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 94.2 bits (234), Expect = 9e-21
Identities = 49/238 (20%), Positives = 80/238 (33%), Gaps = 30/238 (12%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLT--WPGIQHKKNSWQDGVLG-TNCPIPPG 109
PG I D + N+ N + G + PG
Sbjct: 54 GETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT-------GPGGGAESSFTAPG 106
Query: 110 KNYTYYLQVKDQIGSYIYHPSTG---FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLL 166
T+ + G YIYH +T H A G +G + + + + P +R ++ L+
Sbjct: 107 HTSTFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLA-PVDR----EYYLV 160
Query: 167 IGDWYTRSHVE--LGKQLDSGKLL-GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGK 223
GD+YT+ + D K + D V+ NG G D L T K G+
Sbjct: 161 QGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTT-------DENSL-TAKVGE 212
Query: 224 VYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQ 281
+ I N G +F + G V +EG + + ++ + G V
Sbjct: 213 TVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV 270
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 88.9 bits (219), Expect = 1e-18
Identities = 38/263 (14%), Positives = 84/263 (31%), Gaps = 53/263 (20%)
Query: 52 INGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG---------T 102
+ F GP I + T D + +++ N P+ GI + K +G +
Sbjct: 88 VWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEH--EGAIYPDNTTDFQRA 145
Query: 103 NCPIPPGKNYTYYLQVKDQ---------IGSYIYHPSTGFHR--AAGGFGGLCIHSRSVV 151
+ + PG+ YTY L ++ + IYH + A+G G L I + +
Sbjct: 146 DDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSL 205
Query: 152 PVPYNRFVEDDFTLLIGDWYTRSHVEL------------GKQLDSGKLLGKPDGVLINGK 199
+ ++ +F ++ L D+ +NG
Sbjct: 206 DKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGY 265
Query: 200 SGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLN-FRIQGHTMKLVEMEGSHVV 258
+ + +M A K+ + +G + ++ G + + +
Sbjct: 266 T----------FGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQA---LTNKNYRI- 311
Query: 259 QNEYESLDVHVGQCFTVLVTANQ 281
+++++ F + A
Sbjct: 312 ----DTINLFPATLFDAYMVAQN 330
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 85.0 bits (209), Expect = 3e-17
Identities = 38/252 (15%), Positives = 80/252 (31%), Gaps = 28/252 (11%)
Query: 43 LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102
+ + ++ + GP +++ D + I N P+ + G+Q + + T
Sbjct: 794 VPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS--------T 845
Query: 103 NCPIPPGKNYTYYLQVKDQI---------GSYIYHP--STGFHRAAGGFGGLCIHSRSVV 151
P PG+ TY ++ ++ + Y+ +G G L + R +
Sbjct: 846 VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYL 905
Query: 152 PVPYNRFVEDDFTLLIGDWY-TRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGK 210
V R + +F LL + S K + + +G+
Sbjct: 906 KVFNPR-RKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGR 964
Query: 211 -GDNEPLFTMKAGKVYKYRICNVGVKTSLN-FRIQGHTMKLVEMEGSHVVQNEYESLDVH 268
N TM G + + +G + L+ GH+ + + D+
Sbjct: 965 MFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSS-----DVFDIF 1019
Query: 269 VGQCFTVLVTAN 280
G T+ +
Sbjct: 1020 PGTYQTLEMFPR 1031
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 66.9 bits (162), Expect = 1e-11
Identities = 34/251 (13%), Positives = 74/251 (29%), Gaps = 28/251 (11%)
Query: 46 PQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNS----------- 94
+ + GP I + D + + NK P + G++ KN+
Sbjct: 438 ERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNP 497
Query: 95 WQDGVLGTNCPIPPGKNYTYYLQVKDQIG---------SYIYHPSTGFHR--AAGGFGGL 143
V + + P + +TY V ++G + +Y+ + + G G +
Sbjct: 498 QSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPM 557
Query: 144 CIHSRSVVPVPYNRFVED-DFTLLIGD---WYTRSHVELGKQLDSGKLLGKPDGVLINGK 199
I + + + D +F L + + + + +
Sbjct: 558 KICKKGSLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTAPDQVDKEDEDFQES 617
Query: 200 SGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNFRIQGHTMKLVEMEGSHVV 258
+ + G+ L TM G + + + G + G+T
Sbjct: 618 NKMHSMNGFMYGNQPGL-TMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTAN 676
Query: 259 QNEYESLDVHV 269
SL +H+
Sbjct: 677 LFPQTSLTLHM 687
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 7e-18
Identities = 52/235 (22%), Positives = 86/235 (36%), Gaps = 24/235 (10%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNY 112
+G PG I D + + N + + Q G PG+
Sbjct: 64 DGDVPGRMIRVREGDTVEVEFSNNPSST---VPHNVDFHAATGQGGGAAAT-FTAPGRTS 119
Query: 113 TYYLQVKDQIGSYIYHPST---GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGD 169
T+ + Q G YIYH + G H A G +G + + + +P V+ +F ++ GD
Sbjct: 120 TFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP-----KVDKEFYIVQGD 173
Query: 170 WYT-RSHVELGKQLDS--GKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYK 226
+YT G Q + +P+ V+ NG G L + L KAG+ +
Sbjct: 174 FYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALT-------GDNAL-KAKAGETVR 225
Query: 227 YRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQ 281
+ N G +F + G V +EG ++ +S V G V +
Sbjct: 226 MYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI 280
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 85.5 bits (211), Expect = 8e-18
Identities = 54/335 (16%), Positives = 100/335 (29%), Gaps = 41/335 (12%)
Query: 24 AGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLL 83
+ T + P + NG FPGP I N+N+ + N L L
Sbjct: 23 KEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFL 82
Query: 84 TWPGIQHKKNSW--------------------QDGVLG---TNCPIPPGKNY---TYYLQ 117
H +S DG + G + Y+
Sbjct: 83 PIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYP 142
Query: 118 VKDQIGSYIYHP----STGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDW-YT 172
+ + YH T + AG G IH + E D LLI D
Sbjct: 143 NQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPS-DEYDVPLLITDRTIN 201
Query: 173 RSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNV 232
P+ ++ G G P ++ K Y++R+ N
Sbjct: 202 EDGSLFYPSAPENPSPSLPNPSIVPAFCGETIL---VNGKVWPYLEVEPRK-YRFRVINA 257
Query: 233 GVKTSLNFRI-QGHTMKLVEMEGSHVVQ-NEYESLDVHVGQCFTVLVTANQDPKDYYLIA 290
+ N + G + +G + + + S + + + +++ + ++A
Sbjct: 258 SNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILA 317
Query: 291 STRFTRTVI---TTTAIVRYSDSKGLASPDLPKAP 322
++ + T I+++ +K LA D + P
Sbjct: 318 NSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKP 352
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 2e-17
Identities = 51/244 (20%), Positives = 86/244 (35%), Gaps = 31/244 (12%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLT--WPGIQHKKNSWQDGVLGTNCPIPPGK 110
NG+ PGP + D + +++ N D + + + G G PG+
Sbjct: 189 NGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAFT-QTDPGE 242
Query: 111 NYTYYLQVKDQIGSYIYHPST---GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLI 167
+ G Y+YH +T H G +G L + P V+ +F ++
Sbjct: 243 ETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVE-----PEGGLPQVDREFYVMQ 296
Query: 168 GDWYT-RSHVELGKQLDS--GKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKV 224
G+ YT +S G+Q + KP+ L NG G L + PL G+
Sbjct: 297 GEIYTVKSFGTSGEQEMDYEKLINEKPEYFLFNGSVGSLT-------RSHPL-YASVGET 348
Query: 225 YKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEY--ESLDVHVGQCFTVLVTANQD 282
+ G + +F + G V GS V +++ V G V ++
Sbjct: 349 VRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR- 407
Query: 283 PKDY 286
Y
Sbjct: 408 AGRY 411
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 13/103 (12%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNY 112
P + + + +N+ N + + I GKN
Sbjct: 49 IDHKINPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARS------------AIVNGKNA 96
Query: 113 TYYLQVK-DQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVP 154
+ ++G + Y+ S HR AG G + + + +
Sbjct: 97 SSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMK 139
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 82.1 bits (202), Expect = 4e-17
Identities = 38/287 (13%), Positives = 66/287 (22%), Gaps = 66/287 (22%)
Query: 15 AAATSGLVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVF 74
T+ AG + ++ + PGP I D L I
Sbjct: 35 KGITARTAPAGGEVRHLK--MYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFT 92
Query: 75 NKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTY------------YLQVKDQI 122
N +D L G+ ++ +S DG + PG TY
Sbjct: 93 NTMDVRASLHVHGLDYEISS--DGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSA 150
Query: 123 GSYIYHPSTGF------HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHV 176
G + YH G +G + + + + T++ D
Sbjct: 151 GYWHYHDHVVGTEHGTGGIRNGLYGPVIVRR------KGDVLPDATHTIVFNDMTI---- 200
Query: 177 ELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT 236
++ K P F G + + G +
Sbjct: 201 ------------------------------NNRKPHTGPDFEATVGDRVEIVMITHG-EY 229
Query: 237 SLNFRIQGHTMKLVEMEGSHV---VQNEYESLDVHVGQCFTVLVTAN 280
F + GH ++ F + A
Sbjct: 230 YHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAG 276
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 80.6 bits (198), Expect = 7e-17
Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 48/246 (19%)
Query: 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNS----WQDGVLG---TNCPIPP 108
GP + + D + ++ NK +P + GI++ K S + D L + + P
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 109 GKNYTYYLQVKDQIGS---------YIYHP--STGFHRAAGGFGGLCIHSR-SVVPVPYN 156
G+ YTY + + G +IY+ + +G G L I + ++
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQ 176
Query: 157 RFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPL 216
+ E L+ + + N S + + P
Sbjct: 177 KMFEKQHVLMFAVF--------------------DESKSWNQTSSLMYTVNGYVNGTMPD 216
Query: 217 FTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTV 275
T+ A + + + + G ++ ++ ++ + T
Sbjct: 217 ITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE--------QNHHKISAITLVSATSTTA 268
Query: 276 LVTANQ 281
+T +
Sbjct: 269 NMTVSP 274
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 79.3 bits (195), Expect = 1e-16
Identities = 38/278 (13%), Positives = 64/278 (23%), Gaps = 66/278 (23%)
Query: 24 AGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLL 83
AG + ++ + PGP I D L I N +D L
Sbjct: 3 AGGEVRHLK--MYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASL 60
Query: 84 TWPGIQHKKNSWQDGVLGTNCPIPPGKNYTY------------YLQVKDQIGSYIYHPST 131
G+ ++ +S DG + PG TY G + YH
Sbjct: 61 HVHGLDYEISS--DGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHV 118
Query: 132 GF------HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG 185
G +G + + + V + T++ D
Sbjct: 119 VGTEHGTGGIRNGLYGPVIVRRKG--DVLPDA----THTIVFNDMTIN------------ 160
Query: 186 KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGH 245
+ K P F G + + G + F + GH
Sbjct: 161 ----------------------NRKPHTGPDFEATVGDRVEIVMITHG-EYYHTFHMHGH 197
Query: 246 TMKLVEMEGSHV---VQNEYESLDVHVGQCFTVLVTAN 280
++ F + A
Sbjct: 198 RWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAG 235
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 77.8 bits (190), Expect = 3e-15
Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 27/248 (10%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNS----WQDGVLG-TNCPIP 107
GP + D L+I N+ P+ + GI + GV + PI
Sbjct: 446 ESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPIL 505
Query: 108 PGKNYTYYLQVKDQIG---------SYIYHP--STGFHRAAGGFGGLCIHSRSVVPVPYN 156
PG+ + Y V + G + Y + A+G G L I + V N
Sbjct: 506 PGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGN 565
Query: 157 RFVED-DFTLLIGDWY-TRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNE 214
+ + D +L + RS ++ + + +G +
Sbjct: 566 QIMSDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDS 625
Query: 215 PLFTMKAGKVYKYRICNVGVKT-SLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCF 273
++ +V + I ++G +T L+ G+T K ++L +
Sbjct: 626 LQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFK--------HKMVYEDTLTLFPFSGE 677
Query: 274 TVLVTANQ 281
TV ++
Sbjct: 678 TVFMSMEN 685
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 68.9 bits (167), Expect = 2e-12
Identities = 41/250 (16%), Positives = 74/250 (29%), Gaps = 42/250 (16%)
Query: 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNS----WQDGVLGTN---CPIPP 108
GP I + D +VI + N P L G+ + K S + D + P
Sbjct: 72 LLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFP 131
Query: 109 GKNYTYYLQVKDQIG---------SYIYHP--STGFHRAAGGFGGLCIHSRSVVPVPYNR 157
G ++TY QV + G +Y Y +G G L + + +
Sbjct: 132 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 191
Query: 158 FVEDDFTLL-----IGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGD 212
+ L W++ + L + D+ P +NG
Sbjct: 192 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYV----------NR 241
Query: 213 NEPLFTMKAGKVYKYRICNVGVKTSLN-FRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQ 271
+ P K + + +G ++ ++GHT + SL++
Sbjct: 242 SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQ--------ASLEISPIT 293
Query: 272 CFTVLVTANQ 281
T
Sbjct: 294 FLTAQTLLMD 303
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 1e-11
Identities = 37/206 (17%), Positives = 64/206 (31%), Gaps = 36/206 (17%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNS-------WQDGVLGTNCP 105
+ GP I + +D + + N P+ L G+ ++K+S +
Sbjct: 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNA 122
Query: 106 IPPGKNYTYYLQVKDQIGS---------YIYHP--STGFHRAAGGFGGLCIHSRSVVPVP 154
I P K YTY + G + Y+ + +G G L I + +
Sbjct: 123 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKE 182
Query: 155 YNR-FVEDDFTLL------IGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDS 207
N +F LL WY + S ++ + ING
Sbjct: 183 TNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY------ 236
Query: 208 DGKGDNEPLFTMKAGKVYKYRICNVG 233
N P M + + + N+G
Sbjct: 237 -----NLPGLRMYEQEWVRLHLLNLG 257
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 3e-11
Identities = 56/271 (20%), Positives = 86/271 (31%), Gaps = 43/271 (15%)
Query: 39 TISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQ-HKKNSWQD 97
I G Q + NG PGP + D + + + N + H
Sbjct: 45 VIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNA---MPHNVDFH---GATG 98
Query: 98 GVLGTNCP-IPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVP 152
+ G + PG+ T + + G+++YH + +H +G G L + R +
Sbjct: 99 ALGGAKLTNVNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLK 157
Query: 153 VPYNRFVEDDFTLLIG--DWYTRSHVELGKQLDSGKLL------------GKPDGVLING 198
P + + D IG D Y + GK D L P ++ NG
Sbjct: 158 DPQGKPLHYDRAYTIGEFDLYIPKGPD-GKYKDYATLAESYGDTVQVMRTLTPSHIVFNG 216
Query: 199 KSGRLDYDSDGKGDNEPLFTMKAG-KVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV 257
K G L G N L T K G V + + + G V G
Sbjct: 217 KVGALT------GAN-AL-TAKVGETV---LLIHSQANRDTRPHLIGGHGDWVWETGKFA 265
Query: 258 VQNEY--ESLDVHVGQCFTVLVTANQDPKDY 286
+ E+ + G L T Q P Y
Sbjct: 266 NPPQRDLETWFIRGGSAGAALYTFKQ-PGVY 295
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 4e-11
Identities = 43/264 (16%), Positives = 78/264 (29%), Gaps = 38/264 (14%)
Query: 39 TISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQ-HKKNSWQD 97
I G + NG PGP + ND + + + N I H +
Sbjct: 51 VIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTN---TLLHNIDFH---AATG 104
Query: 98 GVLGTN-CPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVP 152
+ G + PG+ T + + G ++YH + +H +G G + + R +
Sbjct: 105 ALGGGALTQVNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLK 163
Query: 153 VPYNRFVEDDFTLLIG--DWYTR-----------SHVELGKQLDSGKLLGKPDGVLINGK 199
+ + D +G D+Y + E + P ++ NG
Sbjct: 164 DEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGA 223
Query: 200 SGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ 259
G L D T G+ + + + + G V G
Sbjct: 224 VGALTGD--------HALTAAVGE--RVLVVHSQANRDTRPHLIGGHGDYVWATGKFRNP 273
Query: 260 NEY--ESLDVHVGQCFTVLVTANQ 281
+ E+ + G T Q
Sbjct: 274 PDLDQETWLIPGGTAGAAFYTFRQ 297
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 7e-09
Identities = 44/256 (17%), Positives = 73/256 (28%), Gaps = 40/256 (15%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGI-QHKKNSWQDGVLGTNCP-IPPGK 110
+G PGP + D + + + N + I H + + G I PG+
Sbjct: 58 DGSIPGPLMIVHEGDYVELTLINPPENT---MPHNIDFH---AATGALGGGGLTLINPGE 111
Query: 111 NYTYYLQVKDQIGSYIYHPSTG-----FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTL 165
+ + G+++YH + G +H +G G + + R + + V D
Sbjct: 112 KVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVY 170
Query: 166 LIG--DWYT-RSHVELGKQLDSGKLLG----------KPDGVLINGKSGRLDYDSDGKGD 212
IG D Y + + P ++ NG G L
Sbjct: 171 YIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALT-------G 223
Query: 213 NEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEY--ESLDVHVG 270
L V + + G LV G E E+ + G
Sbjct: 224 EGALKAKVGDNVL---FVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGG 280
Query: 271 QCFTVLVTANQDPKDY 286
L Q P Y
Sbjct: 281 TAGAALYKFLQ-PGVY 295
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 7e-08
Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 45/211 (21%)
Query: 49 GILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPP 108
G+L GP I + DN+++ N+ P+ I ++++ Q N + P
Sbjct: 195 GLL------GPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQRQGAEPRKN-FVKP 247
Query: 109 GKNYTYYLQVKDQIG---------SYIYHPSTGF--HRAAGGFGGLCIHSRSVVPVPYNR 157
+ TY+ +V+ + ++ Y +G G L + + + + R
Sbjct: 248 NETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGR 307
Query: 158 FVED-DFTLL--IGD----WYTRSHVELGKQLDSGKLLGKPDGVL--------INGKSGR 202
V +F L I D WY ++E + + + D ING
Sbjct: 308 QVTVQEFALFFTIFDETKSWYFTENME--RNCRAPCNIQMEDPTFKENYRFHAINGYI-- 363
Query: 203 LDYDSDGKGDNEPLFTMKAGKVYKYRICNVG 233
D P M + ++ + ++G
Sbjct: 364 --------MDTLPGLVMAQDQRIRWYLLSMG 386
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 4e-07
Identities = 64/496 (12%), Positives = 148/496 (29%), Gaps = 153/496 (30%)
Query: 146 HSRSVVPVPYNRFVED-DFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGV---------- 194
+ ++ V + FV++ D + D +S + +++D ++ D V
Sbjct: 17 QYKDILSVFEDAFVDNFDCK-DVQD-MPKS-ILSKEEID--HIIMSKDAVSGTLRLFWTL 71
Query: 195 LINGKSG---------RLDYD----SDGKGDNEPLFTMKAGKVYKYRICNVG---VKTSL 238
L + R++Y +P + + R+ N K ++
Sbjct: 72 LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131
Query: 239 NFRIQGHTM---KLVE-----------MEGS-------HVVQNE--YESLD-----VHVG 270
+ R+Q + L+E + GS V + +D +++
Sbjct: 132 S-RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190
Query: 271 QCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKG-----LASPDLPKAPVGW 325
C + K Y I +R+ ++ +R + L S +
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
Query: 326 D--WSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTI---RLANTAHLVNGKVRFAV 380
+ + +F NL+ + + R ++ +
Sbjct: 251 LNVQNAKAWNAF--NLSC-------------------KILLTTRFKQVTDFLSAATTTHI 289
Query: 381 NGVSYVNSETPLK----FAEYYGI-----PEEVFKYN-----VISDKPADEIENVTLQPN 426
+ + + TP + +Y P EV N +I++ D +
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL-------- 341
Query: 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV----S 482
AT+ + + + ++S V +EP + RK ++ + +V +
Sbjct: 342 ---ATWDNWKHVNCDKLTTIIES-------SLNV-LEP----AEYRKMFDRL-SVFPPSA 385
Query: 483 RYTIQVFPNCWAA--------ILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR------- 527
+ W ++ + + + E +YL ++
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK--ESTISIPSIYLELKVKLENEY 443
Query: 528 -LHKRSLRDEYNMPDN 542
LH+ + D YN+P
Sbjct: 444 ALHRS-IVDHYNIPKT 458
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 29/181 (16%), Positives = 64/181 (35%), Gaps = 42/181 (23%)
Query: 374 GKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYK 433
G+ ++ + V + + + + + +++S + EI+++ + + + T +
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDCKDVQD--MPKSILSKE---EIDHIIMSKDAVSGTLR 66
Query: 434 AFMEIVLENRQNTMQSWILDG----YAFFAVGMEPGTWNP-DKRKSYNLIDAVSRY--TI 486
F +L ++ +Q ++ + Y F ++ P + Y I+ R
Sbjct: 67 LF-WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY--IEQRDRLYNDN 123
Query: 487 QVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLC 546
QVF + N+ R Q YL +R LR N L+
Sbjct: 124 QVFA------------------KYNVS-R----LQPYLKLRQALLELRPA----KNVLID 156
Query: 547 G 547
G
Sbjct: 157 G 157
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 78/597 (13%), Positives = 173/597 (28%), Gaps = 175/597 (29%)
Query: 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQ---DGVLGTN--------- 103
P ++ D+ +I + + L W + ++ Q + VL N
Sbjct: 41 MPKSILSKEEIDH-IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK 99
Query: 104 -CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDD 162
P Y++ +D++ ++ + V YN
Sbjct: 100 TEQRQPSMMTRMYIEQRDRL-----------------------YNDNQVFAKYNVSRLQP 136
Query: 163 FTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKG-------DNEP 215
+ L R + +L K VLI+G G GK +
Sbjct: 137 YLKL------RQAL---LELRPAK------NVLIDGVLGS------GKTWVALDVCLSYK 175
Query: 216 LFTMKAGKVY--KYRIC-----------NVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEY 262
+ K++ + C + + N+ + +++ H +Q E
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR-IHSIQAEL 234
Query: 263 ESLDVHVGQCFTVLVTAN-QDPK--DYYLIASTRFTRTVITT--TAIVRYSDSKGLASPD 317
L +LV N Q+ K + + ++ + ++TT + + +
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC----KILLTTRFKQVTDFLSAATTTHIS 290
Query: 318 LPKAPVGW--DWSLNQFRSFRWN----LTASAARPNPQGSFHYGGIP---INRTIRLANT 368
L + D + + L NP I + N
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP---RRLSIIAESIRDGLATWDNW 347
Query: 369 AHLVNGKVRFAVNGVSYVNSETPLKFAEYYG----------IPEEVFK---YNVISDKP- 414
H+ K+ + S +N P ++ + + IP + ++VI
Sbjct: 348 KHVNCDKLTTIIE--SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 415 --ADEIENVTL---QPNVMDATY---------------KAFMEIVLENRQNTMQSW---- 450
+++ +L QP ++T + + + + N +++
Sbjct: 406 VVVNKLHKYSLVEKQPK--ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 451 ----ILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNC-----WAAILVSMD 501
LD Y + +G ++L + + +F + + +
Sbjct: 464 LIPPYLDQYFYSHIG-------------HHLKNIEHPERMTLFRMVFLDFRF--LEQKIR 508
Query: 502 NAGM-WNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIVANMSKPTP 557
+ WN +I N L Q ++ +K + D + L+ I+ + K
Sbjct: 509 HDSTAWNASGSI--LNTLQQ-----LKFYKPYICDNDPKYE-RLVNAILDFLPKIEE 557
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 561 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.96 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.95 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.95 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.89 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.87 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.87 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.86 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.83 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.82 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.79 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.76 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.65 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.62 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.61 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 99.55 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 99.55 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.53 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 99.46 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 99.45 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.43 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 99.42 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 99.41 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 99.4 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 99.39 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.37 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 99.36 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 99.34 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 99.34 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 99.28 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.27 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 99.23 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.23 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 99.21 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.15 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.13 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 99.11 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 99.05 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 98.97 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 98.93 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.92 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 98.91 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.87 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.85 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.83 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.81 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.76 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.69 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.67 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.64 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.62 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.6 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.58 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.58 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.57 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.53 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.52 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.5 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.49 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.44 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.43 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.42 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.34 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 98.32 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 98.31 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 98.25 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 98.25 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.21 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 98.2 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 98.2 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.18 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 98.06 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 98.03 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 97.98 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 97.96 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 97.92 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 97.85 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 97.83 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.79 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 97.77 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 97.21 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.16 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.13 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 97.09 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 97.06 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 97.01 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 97.0 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 96.73 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 96.33 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 96.1 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 95.95 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 95.93 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.24 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 95.19 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 95.13 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 94.46 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 93.81 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 93.33 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 92.26 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 92.22 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 87.04 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 85.13 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-100 Score=836.40 Aligned_cols=504 Identities=27% Similarity=0.494 Sum_probs=396.9
Q ss_pred CCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 26 SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
+.+|+|+|+|++..+++||.++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++|+||++++ |
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 999999999999999999999997 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhhc
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQLD 183 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 183 (561)
|+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||++++....+++. |+|++|+|+||+++....+...+.
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~--d~e~~l~l~Dw~~~~~~~~~~~~~ 157 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHY--DGEINLLLSDWWHQSIHKQEVGLS 157 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCC--SEEEEEEEEEECSSCHHHHHHHTT
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCC--CccceEEeecccCCCHHHHHhhhh
Confidence 999999999999997 78999999999999999999999999998655556655 789999999999987655432222
Q ss_pred CC--CCCCCCCeEEEcCccCCCCCC----------CC---CCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccE
Q 046746 184 SG--KLLGKPDGVLINGKSGRLDYD----------SD---GKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMK 248 (561)
Q Consensus 184 ~~--~~~~~~~~~liNG~~~~~~~~----------~~---~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 248 (561)
.. ...+.++.+||||+....|-. |. ...+..+.++|++|++|||||||+|..+.+.|+|+||+|+
T Consensus 158 ~~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~ 237 (552)
T 1aoz_A 158 SKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLL 237 (552)
T ss_dssp SSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEE
T ss_pred cccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEE
Confidence 21 112357899999999622200 11 1122345899999999999999999999999999999999
Q ss_pred EEeecCcccceeeeeeEEEcccceEEEEEEe-CCCCCceEEEEEeecc-CCcceeEEEEEecCCCCC--CCCCCCCCC--
Q 046746 249 LVEMEGSHVVQNEYESLDVHVGQCFTVLVTA-NQDPKDYYLIASTRFT-RTVITTTAIVRYSDSKGL--ASPDLPKAP-- 322 (561)
Q Consensus 249 via~DG~~~~p~~~~~v~l~pgeR~dv~v~~-~~~~g~y~i~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~p-- 322 (561)
|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|||++....+ .......|+|+|.+.... ...+.|..|
T Consensus 238 vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~ 317 (552)
T 1aoz_A 238 VVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAW 317 (552)
T ss_dssp EEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCT
T ss_pred EEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcc
Confidence 9999999999999999999999999999999 4568999999987643 234567899999876531 111222222
Q ss_pred CCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCC
Q 046746 323 VGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPE 402 (561)
Q Consensus 323 ~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~ 402 (561)
.+..... ...+. .+....+.+.+ ...++++.+.......++...|+|||++|..+..|+|.+.++++ .
T Consensus 318 ~~~~~~~--~~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~-~ 385 (552)
T 1aoz_A 318 DDFDRSK--NFTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNL-L 385 (552)
T ss_dssp TCHHHHH--HHHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTC-T
T ss_pred ccccccc--ccccc-ccccCCCCCCC--------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcC-c
Confidence 1100000 00000 11100011111 23567777765443345667899999999988999987766554 4
Q ss_pred cccccCCCCCCC---------CcccccccccceEEecCCCcEEEEEEEcCCC------CCCceeecCCceEEEeecCCCC
Q 046746 403 EVFKYNVISDKP---------ADEIENVTLQPNVMDATYKAFMEIVLENRQN------TMQSWILDGYAFFAVGMEPGTW 467 (561)
Q Consensus 403 ~~~~~~~~~~~p---------~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~------~~HP~HlHG~~F~Vl~~~~g~~ 467 (561)
++|+.+.....+ .. +...+.++.++.++.|++|||+|+|.+. ..||||||||+||||+++.|.|
T Consensus 386 g~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~ 464 (552)
T 1aoz_A 386 HAFDQNPPPEVFPEDYDIDTPPT-NEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKF 464 (552)
T ss_dssp TSSCCSCCCSCCCTTCCTTSCCC-CTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSC
T ss_pred cccccCCCccccccccccccccc-cccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCcc
Confidence 555433221111 11 1234567788999999999999999873 4699999999999999998988
Q ss_pred CcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCcccccc
Q 046746 468 NPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCG 547 (561)
Q Consensus 468 ~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~ 547 (561)
++.....+|+.+|.|||||.|++++|++|||+|||||.|+|||||++|++.|||++|.|... +++++|++++.||
T Consensus 465 ~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~ 539 (552)
T 1aoz_A 465 SAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACG 539 (552)
T ss_dssp CGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSH
T ss_pred CcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhh
Confidence 87445578999999999999999999999999999999999999999999999999987542 4667899999998
Q ss_pred Ccc
Q 046746 548 IVA 550 (561)
Q Consensus 548 ~~~ 550 (561)
.++
T Consensus 540 ~~~ 542 (552)
T 1aoz_A 540 GTA 542 (552)
T ss_dssp HHH
T ss_pred ccC
Confidence 776
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-96 Score=798.22 Aligned_cols=476 Identities=24% Similarity=0.374 Sum_probs=375.4
Q ss_pred CCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 26 SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
+.+|+|+|+|+++.+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.++++|||++++ |
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 46899999999999999999999999999999999999999999999999998 899999999999999999999997 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCce-EEEecceeecchHHhhhhh
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDF-TLLIGDWYTRSHVELGKQL 182 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 182 (561)
|||+||++|+|+|++ .++||||||||.+.|+.+||+|+|||+++.. .+| |.|. +|+|+||+++...++....
T Consensus 145 ~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~y----D~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--ADY----DEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp CCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC----SEEEEEEEEEEECSSCHHHHHHHH
T ss_pred CCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CCC----CccceEEEEEEEecCCHHHHHHHH
Confidence 999999999999997 5899999999999999999999999998653 234 7777 9999999998876654433
Q ss_pred cCCCCCCCCCeEEEcCccCCCCCCCCCC-------CCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCc
Q 046746 183 DSGKLLGKPDGVLINGKSGRLDYDSDGK-------GDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGS 255 (561)
Q Consensus 183 ~~~~~~~~~~~~liNG~~~~~~~~~~~~-------~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 255 (561)
..+ ..+.++++||||+.. ++|+.. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.
T Consensus 218 ~~~-~~~~~d~~liNG~~~---~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG-APPALENTLMNGTNT---FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS-CCCCBSEEEETTBCC---CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc-CCCCCceEEECCccc---CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 222 246789999999986 444221 224589999999999999999999999999999999999999999
Q ss_pred ccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC----CcceeEEEEEecCCCCCCCCCCCCCCCCccccc-c
Q 046746 256 HVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR----TVITTTAIVRYSDSKGLASPDLPKAPVGWDWSL-N 330 (561)
Q Consensus 256 ~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~-~ 330 (561)
+++|..+++|.|+|||||||+|++++.+|+|||++...... .....+|||+|.++... .|..+. +.. .
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~---~~~~~ 366 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVG---TTPRG 366 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCC---CCCCC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCC---CCccc
Confidence 99999999999999999999999998889999999865322 13467999999875421 121110 000 0
Q ss_pred cccccc-ccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeecc-CCCCchhhhhhcCCCCcccccC
Q 046746 331 QFRSFR-WNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYV-NSETPLKFAEYYGIPEEVFKYN 408 (561)
Q Consensus 331 ~~~~~~-~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~-~~~~P~l~~~~~~~~~~~~~~~ 408 (561)
.+.+.. ..|.+..+.+.+. ..+.++.+... .++...|+|||.+|. ++..|+|+..+.+.
T Consensus 367 ~~~~~~~~~L~P~~~~~~~~--------~~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~-------- 427 (580)
T 3sqr_A 367 TCEDEPVASLVPHLALDVGG--------YSLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNNE-------- 427 (580)
T ss_dssp CSCCSCGGGCCBSSCCBCCS--------EEEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTTC--------
T ss_pred hhhcccccccccCCCCCCCC--------ccceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcCC--------
Confidence 111110 1232222111111 12233333321 245678999999997 46788876543210
Q ss_pred CCCCCCCcccccccccceEEecC----CCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCC-CCCCCCCCCC
Q 046746 409 VISDKPADEIENVTLQPNVMDAT----YKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDK-RKSYNLIDAV 481 (561)
Q Consensus 409 ~~~~~p~~~~~~~~~~~~~~~~~----~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~n~~~P~ 481 (561)
...| ...+++.++ .|++|||+|+|.+ ...||||||||+||||++|.|.|++.. +..+|+.||+
T Consensus 428 --~~~~--------~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~ 497 (580)
T 3sqr_A 428 --TIFP--------TEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPP 497 (580)
T ss_dssp --CCCC--------GGGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCC
T ss_pred --ccCC--------CCcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCc
Confidence 0111 234455554 6999999999988 789999999999999999999998754 3579999999
Q ss_pred ceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCc-cccccCcc
Q 046746 482 SRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDN-ALLCGIVA 550 (561)
Q Consensus 482 ~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 550 (561)
+|||+.|+++||++|||++||||.|+|||||++|++.||+++|.+.. ++ +++..++|++ ...|..+.
T Consensus 498 ~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~-~~-i~~~~~~~~~~~~~C~~~~ 565 (580)
T 3sqr_A 498 RRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ-SS-IAVKMTDTAIFEDTCANWN 565 (580)
T ss_dssp EESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESG-GG-CCCCHHHHHHHHHHHHHHH
T ss_pred eeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECH-HH-HhhccCCcHHHHHhhHHHh
Confidence 99999999999999999999999999999999999999999998743 33 3333334555 46786553
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-96 Score=797.44 Aligned_cols=483 Identities=21% Similarity=0.318 Sum_probs=372.5
Q ss_pred cCCCeEEEEEEEEEEEecCCCe-eeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-----CCeeeeeCCccCCCCCCCC
Q 046746 24 AGSPTFFFTWNVTYGTISPLGI-PQQGILINGQFPGPNINSTTNDNLVINVFNKLD-----EPFLLTWPGIQHKKNSWQD 97 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~D 97 (561)
+.+.+.+|+|++++..+++||+ ++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++++|
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D 98 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMD 98 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGS
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccC
Confidence 3456678999999999999999 999999999999999999999999999999998 9999999999999999999
Q ss_pred CCCcc-CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC-CCCCCCCCCCceEEEecceeecch
Q 046746 98 GVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV-PVPYNRFVEDDFTLLIGDWYTRSH 175 (561)
Q Consensus 98 Gv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~~e~~l~~~d~~~~~~ 175 (561)
|++++ ||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. +.+|+. +++|++|+++||+++..
T Consensus 99 Gv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~-d~~e~~l~l~D~~~~~~ 177 (521)
T 1v10_A 99 GPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDV-DDASTVITIADWYHSLS 177 (521)
T ss_dssp CCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEEEECSSCC
T ss_pred CCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCC-CCceeEEEEcccccCCH
Confidence 99997 9999999999999998789999999999999999999999999987532 234543 34799999999999876
Q ss_pred HHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCc
Q 046746 176 VELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGS 255 (561)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 255 (561)
.++.. ..+...+.++.++|||+.+ |.|+......+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.
T Consensus 178 ~~~~~--~~~~~~~~~d~~liNG~~~---~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~ 252 (521)
T 1v10_A 178 TVLFP--NPNKAPPAPDTTLINGLGR---NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGV 252 (521)
T ss_dssp C---------CCCSCCSEEEETTBCC---CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred HHHhh--ccCCCCCCCCEEEECCccc---CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCc
Confidence 65532 1222345689999999986 444322234589999999999999999999999999999999999999999
Q ss_pred ccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCcccccccc
Q 046746 256 HVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQF 332 (561)
Q Consensus 256 ~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~ 332 (561)
+++|..++++.|+|||||||+|++++.+|+|||++....... .....++|+|.+.....+...+....+ +.
T Consensus 253 ~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~----~~-- 326 (521)
T 1v10_A 253 SHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTA----LN-- 326 (521)
T ss_dssp EEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCB----CC--
T ss_pred cccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccc----cc--
Confidence 999999999999999999999999977899999998653211 122369999987653211110000000 00
Q ss_pred ccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCe-EEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCC
Q 046746 333 RSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGK-VRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVIS 411 (561)
Q Consensus 333 ~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~ 411 (561)
+..+.+....+.|.... ....++++.+.... ++. ..|+|||++|..+..|+|++.+. +.++.
T Consensus 327 ---~~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~~---~~~~~~~~iNg~~~~~~~~P~l~~~~~----g~~~~---- 389 (521)
T 1v10_A 327 ---EANLIPLINPGAPGNPV---PGGADINLNLRIGR---NATTADFTINGAPFIPPTVPVLLQILS----GVTNP---- 389 (521)
T ss_dssp ---GGGCCBSSCCCCSSCSS---TTCSSEEEECCEEC---CSSSSCCEESSCCCCCCSSCHHHHHHH----TCCCG----
T ss_pred ---hhhcccCCcccCCCccc---CCcceEEEEEEEec---CCceeEEEECCCcccCCCCchhhhhhc----CCccc----
Confidence 01222211111111100 01234555544311 222 36999999999888887765432 11110
Q ss_pred CCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEe-CC
Q 046746 412 DKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQV-FP 490 (561)
Q Consensus 412 ~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~v-p~ 490 (561)
.....++.++.++.|++|||+++| .+.||||||||+||||+++.+. .+|+.+|.|||||.| ++
T Consensus 390 -------~~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~ 453 (521)
T 1v10_A 390 -------NDLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGG 453 (521)
T ss_dssp -------GGSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBS
T ss_pred -------ccCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCC
Confidence 012345778999999999999999 7899999999999999997652 367889999999999 89
Q ss_pred CcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCC-CccccccCccCCC
Q 046746 491 NCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP-DNALLCGIVANMS 553 (561)
Q Consensus 491 ~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~~ 553 (561)
++|++|||+|||||.|+|||||++|++.|||+.|.|...+ .++..++| ++.+.|..+....
T Consensus 454 gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 454 GDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp SCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCCCHHHHTHHHHHTTCC
T ss_pred CcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCCChHHhhhchhhhccC
Confidence 9999999999999999999999999999999999886543 33445555 4588998887764
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-96 Score=793.32 Aligned_cols=470 Identities=23% Similarity=0.366 Sum_probs=370.0
Q ss_pred CeEEEEEEEEEEEecCCC-eeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 27 PTFFFTWNVTYGTISPLG-IPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~dG-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
++|+|+|+|++..+++|| .++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++++||+|++ |
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 479999999999999999 7999999999999999999999999999999998 999999999999999999999997 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhh-hh
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGK-QL 182 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~-~~ 182 (561)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.. +++ .|+|++|+|+||+++...++.. .+
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~~--~d~e~~l~l~Dw~~~~~~~~~~~~~ 155 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PYD--YDEELSLSLSEWYHDLVTDLTKSFM 155 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CSC--CSEEEEEEEEEECSSCHHHHHHHHS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CCC--CcceEEEEeeccccCCHHHHHHHHh
Confidence 99999999999999866899999999999999999999999999753 333 3889999999999998776543 22
Q ss_pred c---CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccce
Q 046746 183 D---SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ 259 (561)
Q Consensus 183 ~---~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p 259 (561)
+ ..+..+.++.+||||+.. +.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|
T Consensus 156 ~~~~~~g~~~~~d~~liNG~~~-------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 156 SVYNPTGAEPIPQNLIVNNTMN-------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp STTCTTCCCCCCSEEEETTBSS-------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred ccccCCCCCCCCceEEECCCCc-------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 2 122345789999999987 999999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEcccceEEEEEEeCCC-CCceEEEEEeecc-------CCcceeEEEEEecCCCCCCCCCCCCCCCCccccccc
Q 046746 260 NEYESLDVHVGQCFTVLVTANQD-PKDYYLIASTRFT-------RTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQ 331 (561)
Q Consensus 260 ~~~~~v~l~pgeR~dv~v~~~~~-~g~y~i~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 331 (561)
..+++|.|+|||||||+|++++. .++|||++..... .......++|+|.++... |..+. .. .+..
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~-~~-~~~~ 295 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNY-VD-SIDN 295 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCC-CS-CSSC
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCc-cc-cccc
Confidence 99999999999999999999864 4799999875422 113456899999875421 11000 00 0010
Q ss_pred -cccccccccccCCCCCCCCCCCcCCcCcceEEEEccceec-cCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCC
Q 046746 332 -FRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHL-VNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNV 409 (561)
Q Consensus 332 -~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~ 409 (561)
..+. .+.+....+.+ ...++++.+...... .++...|+|||++|..++.|+|+..+. .+.+..
T Consensus 296 ~~~~~--~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~---~~~~~~-- 360 (534)
T 1zpu_A 296 FLDDF--YLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS---SGDQAN-- 360 (534)
T ss_dssp SCCGG--GCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT---SGGGTT--
T ss_pred ccccc--cceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecc---cCcccC--
Confidence 0000 11111111111 124577766554321 345567999999999998998765432 111110
Q ss_pred CCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCC----------CCCcCCCCCCCCCC
Q 046746 410 ISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPG----------TWNPDKRKSYNLID 479 (561)
Q Consensus 410 ~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g----------~~~~~~~~~~n~~~ 479 (561)
.+. ....+++++.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+
T Consensus 361 ---~~~----~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~ 432 (534)
T 1zpu_A 361 ---NSE----IYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEY 432 (534)
T ss_dssp ---CGG----GGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSS
T ss_pred ---CCc----ccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCC
Confidence 111 1123467889999999999999999999999999999999999864 3443322222 468
Q ss_pred CCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccc--cCCCCcc-ccc
Q 046746 480 AVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDE--YNMPDNA-LLC 546 (561)
Q Consensus 480 P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~--~~~p~~~-~~c 546 (561)
|.|||||.|++++|++|||++||||.|+|||||++|++.|||++|.|... + +++. .++|++. +.|
T Consensus 433 p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~-~~~~~~~~~p~~~~~~C 500 (534)
T 1zpu_A 433 PMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF-G-IQDAHSQQLSENHLEVC 500 (534)
T ss_dssp CEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH-H-HHHCGGGSCCHHHHHHH
T ss_pred CCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc-c-cccccccCCChhHhhhh
Confidence 99999999999999999999999999999999999999999999987543 2 3332 4556654 455
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-95 Score=778.56 Aligned_cols=474 Identities=20% Similarity=0.309 Sum_probs=365.8
Q ss_pred EEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCC-----CeeeeeCCccCCCCCCCCCCCcc-
Q 046746 29 FFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE-----PFLLTWPGIQHKKNSWQDGVLGT- 102 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~- 102 (561)
.+|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|.+++++||++++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999975 79999999999999999999987
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC-CCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV-PVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+. +++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~-d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDV-DDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEEEECSSCGGGS---
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCC-CCceeEEEEecccCCchhhh---
Confidence 9999999999999998788999999999999999999999999986542 223544 35678999999999766432
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNE 261 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 261 (561)
.+.....++++||||++. +.|....+..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..
T Consensus 161 --~~~~p~~~d~~liNG~g~---~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGLGR---THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp --CSSSCCCCSEEEETTBCC---BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred --ccCCCCCCcEEEECCcCc---CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 112234789999999985 333222335589999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccc
Q 046746 262 YESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWN 338 (561)
Q Consensus 262 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 338 (561)
+++|.|+|||||||+|++++.+|+|||++....... .....|+|+|.++....+.. ..+. .. .... .+..
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~--~~~~-~~--~~~~--~~~~ 308 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVT--VAST-VH--TKCL--IETD 308 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCC--CCCS-SC--SSBC--CGGG
T ss_pred eeeEEEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCC--CCCC-CC--cccc--cccc
Confidence 999999999999999999987899999998643221 12357999998764311110 0000 00 0000 0112
Q ss_pred ccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCccc
Q 046746 339 LTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEI 418 (561)
Q Consensus 339 l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~ 418 (561)
|.+....+.|... .....++++.+.... ++. .|+|||++|..++.|+|++.+. +.+...
T Consensus 309 L~p~~~~~~p~~~---~~~~~d~~~~l~~~~---~~~-~w~iNg~s~~~~~~P~L~~~~~----g~~~~~---------- 367 (495)
T 3t6v_A 309 LHPLSRNGVPGNP---HQGGADCNLNLSLGF---ACG-NFVINGVSFTPPTVPVLLQICS----GANTAA---------- 367 (495)
T ss_dssp CCBSSCCCCSSCS---STTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHT----TCCSST----------
T ss_pred ccccccccCCCcc---CCCCCcEEEEEEEEe---cCc-EEEEcCEecCCCCCcchhhhhc----CCcCcc----------
Confidence 2222111111100 001245566554432 222 6999999999888998765432 211110
Q ss_pred ccccccceEEecCCCcEEEEEEE-cCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCC-CcEEEE
Q 046746 419 ENVTLQPNVMDATYKAFMEIVLE-NRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFP-NCWAAI 496 (561)
Q Consensus 419 ~~~~~~~~~~~~~~g~~ve~vl~-N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~-~g~~~i 496 (561)
.......++.++.|++|||+|+ |.+.+.||||||||+|+||+++.. ..+|+.+|.||||+.|++ |+|++|
T Consensus 368 -~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~i 439 (495)
T 3t6v_A 368 -DLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTI 439 (495)
T ss_dssp -TSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEE
T ss_pred -cccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEE
Confidence 1123456889999999999998 677889999999999999987421 247889999999999997 899999
Q ss_pred EEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCc-cccccCc
Q 046746 497 LVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDN-ALLCGIV 549 (561)
Q Consensus 497 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 549 (561)
||++||||.|+|||||++|++.||+++|.+ .+++ +++..++|++ ...|..+
T Consensus 440 rf~adnPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~-~~~~~~~p~~~~~~C~~~ 491 (495)
T 3t6v_A 440 RFCTDNPGPWFLHCHIDWHLDAGFAIVFAE-DIPN-TASANPVPEAWSNLCPSY 491 (495)
T ss_dssp EEECCSCEEEEEEESCHHHHHTTCEEEEEE-THHH-HHHHCCCCHHHHHHHHHH
T ss_pred EEEcCCCeeEEEEecchhHhhcCCeEEEEE-ChhH-hccccCCCHHHHHHhhHh
Confidence 999999999999999999999999999954 4443 3333445555 5688654
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-94 Score=773.46 Aligned_cols=475 Identities=22% Similarity=0.391 Sum_probs=367.2
Q ss_pred EEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCC-----CeeeeeCCccCCCCCCCCCCCcc-
Q 046746 29 FFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE-----PFLLTWPGIQHKKNSWQDGVLGT- 102 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~- 102 (561)
.+|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|.+++++||++++
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999984 79999999999999999999987
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC-CCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV-PVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+. +++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~-d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDV-DNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEEEECSSCTTT----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCC-CCceEEEEEEcccCCcccc----
Confidence 9999999999999998788999999999999999999999999986532 223544 3567899999999875432
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNE 261 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 261 (561)
.+.....++++||||++. +.|. ..+..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..
T Consensus 159 --~~~~p~~~d~~liNG~~~---~~~~-~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 --GPRFPGGADATLINGKGR---APSD-SVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp --SCSSCSSCSEEEETTBCC---CTTC-TTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred --ccCCCCCCcEEEECCCCc---CCCC-CCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 122233689999999985 2221 1234589999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccc
Q 046746 262 YESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWN 338 (561)
Q Consensus 262 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 338 (561)
+++|.|+|||||||+|++++.+|+|||++....... .....|+|+|.++.... |..+.... .... .+..
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~----p~~~~~~~--~~~~--~~~~ 304 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVE----PTTNQTTS--VKPL--NEVD 304 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC----CCCCCCCC--SSBC--CGGG
T ss_pred eeeEEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCC----CCCCCCCC--Cccc--cccc
Confidence 999999999999999999987899999998643221 12357999998764311 11110000 0000 0112
Q ss_pred ccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCccc
Q 046746 339 LTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEI 418 (561)
Q Consensus 339 l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~ 418 (561)
|.+....+.|... .....++++.+.... ++. .|+|||++|..++.|+|++.+. +.+...
T Consensus 305 L~p~~~~~~p~~~---~~~~~d~~~~l~~~~---~~~-~w~iNg~s~~~~~~P~L~~~~~----g~~~~~---------- 363 (499)
T 3pxl_A 305 LHPLVSTPVPGAP---SSGGVDKAINMAFNF---NGS-NFFINGASFVPPTVPVLLQILS----GAQTAQ---------- 363 (499)
T ss_dssp CCBSSCCCCSSCS---STTCSSEEEECCEEE---CSS-CEEETTBCCCCCSSCHHHHHHT----TCCSTT----------
T ss_pred ccccccccCCCcc---cCCCCcEEEEEEEEe---cCc-EEEEcCEecCCCCCchhhhhhc----CCcccc----------
Confidence 2222111111100 011245666655432 222 6999999999989998765432 211110
Q ss_pred ccccccceEEecCCCcEEEEEEE---cCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCC---Cc
Q 046746 419 ENVTLQPNVMDATYKAFMEIVLE---NRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFP---NC 492 (561)
Q Consensus 419 ~~~~~~~~~~~~~~g~~ve~vl~---N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~---~g 492 (561)
.......++.++.|++|||+|+ |.+.+.||||||||+||||+++. ...+|+.+|.+|||+.|++ ++
T Consensus 364 -~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P~~rDtv~v~~~~pg~ 435 (499)
T 3pxl_A 364 -DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG-------STVYNYDNPIFRDVVSTGTPAAGD 435 (499)
T ss_dssp -TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCCGGGTC
T ss_pred -ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-------CcccccCCCCccceEEcCCcCCCc
Confidence 1123456889999999999999 56678999999999999998742 1248889999999999997 99
Q ss_pred EEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCCCc-cccccCccCCC
Q 046746 493 WAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDN-ALLCGIVANMS 553 (561)
Q Consensus 493 ~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~~~~ 553 (561)
|++|||++||||.|+|||||++|++.||+++|. +.+++ +++...+|++ ...|..+...+
T Consensus 436 ~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~-e~~~~-~~~~~~~p~~~~~~C~~~~~~~ 495 (499)
T 3pxl_A 436 NVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-EDTPD-VKAVNPVPQAWSDLCPTYDALD 495 (499)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTCEEEEE-ESGGG-HHHHSCCCHHHHTHHHHHHTSC
T ss_pred EEEEEEEcCCCceEEEEeCChhHhhCCCcEEEE-EChhH-hccccCCCHHHHHhhhHhhccC
Confidence 999999999999999999999999999999984 45544 3333444555 67897776543
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-93 Score=765.18 Aligned_cols=471 Identities=25% Similarity=0.439 Sum_probs=367.6
Q ss_pred EEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-----CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 30 FFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-----EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 30 ~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
+|+|++++..+++||+.+.+|+|||++ ||+|++++||+|+|+|+|+|+ ++++|||||+++.+++++||++++ |
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999998 999999999999989999999997 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC-CCCCCCCCCCceEEEecceeecchHHhhhhh
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV-PVPYNRFVEDDFTLLIGDWYTRSHVELGKQL 182 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (561)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. +.+|+. +++|++|+++||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~-d~~e~~l~l~Dw~~~~~~~~~~-- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDE-DDENTIITLADWYHIPAPSIQG-- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSTTSEEEEEEECSSCGGGCC---
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCC-CCceEEEEEcccccCChHHhcC--
Confidence 999999999999998788999999999999999999999999987532 234543 2469999999999987665421
Q ss_pred cCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeee
Q 046746 183 DSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEY 262 (561)
Q Consensus 183 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 262 (561)
.+.++.+||||+.. |.|+. .+..+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|..+
T Consensus 162 -----~~~~d~~liNG~~~---~~~~~-~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 162 -----AAQPDATLINGKGR---YVGGP-AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp -------CCSEEEETTBCC---BTTCC-CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred -----CCCCCEEEECcccc---cCCCC-CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 14578999999986 55532 2345899999999999999999999999999999999999999999999999
Q ss_pred eeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC-------cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccc
Q 046746 263 ESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT-------VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSF 335 (561)
Q Consensus 263 ~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 335 (561)
+++.|+|||||||+|++++.+|+|||++....... .....++|+|.+.....+.. +..|... .+..
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~~--~l~~---- 305 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNPA--QLNE---- 305 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSCC--BCCG----
T ss_pred CeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCccC--CCcc----
Confidence 99999999999999999977899999998652211 12347999998764321100 0001000 0110
Q ss_pred cccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCC
Q 046746 336 RWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPA 415 (561)
Q Consensus 336 ~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~ 415 (561)
..+.+....+.|.... ....++++.+.... ++. .|+|||++|..+..|+|++.+. +.++.
T Consensus 306 -~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~----g~~~~-------- 365 (503)
T 1hfu_A 306 -ADLHALIDPAAPGIPT---PGAADVNLRFQLGF---SGG-RFTINGTAYESPSVPTLLQIMS----GAQSA-------- 365 (503)
T ss_dssp -GGCBBSSSCSCSSCSS---TTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHT----TCCSG--------
T ss_pred -ccccccCccCCCCccc---CCcceEEEEEEeec---cCc-eEEECCCccCCCCCcchhhhhc----CCccc--------
Confidence 1122211111111100 01234455443221 222 6999999999888888765432 11110
Q ss_pred cccccccccceEEecCCCcEEEEEEEc-CCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEe-CCCcE
Q 046746 416 DEIENVTLQPNVMDATYKAFMEIVLEN-RQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQV-FPNCW 493 (561)
Q Consensus 416 ~~~~~~~~~~~~~~~~~g~~ve~vl~N-~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~v-p~~g~ 493 (561)
.....++.++.++.|++|||+++| .+.+.||||||||+||||+++.+. .+|+.+|.|||||.| ++++|
T Consensus 366 ---~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~ 435 (503)
T 1hfu_A 366 ---NDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDE 435 (503)
T ss_dssp ---GGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCE
T ss_pred ---ccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCce
Confidence 012345778999999999999995 557899999999999999997652 367889999999999 99999
Q ss_pred EEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCCC-CccccccCccCC
Q 046746 494 AAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMP-DNALLCGIVANM 552 (561)
Q Consensus 494 ~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~ 552 (561)
++|||++||||.|+|||||++|++.|||+.|.|...+ ..+..++| ++.+.|+.+...
T Consensus 436 v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C~~~~~~ 493 (503)
T 1hfu_A 436 VTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLCEIYDDL 493 (503)
T ss_dssp EEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHHHHHHHTC
T ss_pred EEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhhccchhhc
Confidence 9999999999999999999999999999999886543 23344556 457899887765
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-92 Score=768.01 Aligned_cols=485 Identities=24% Similarity=0.344 Sum_probs=371.1
Q ss_pred cCCCeEEEEEEEEEEE--ecCCCee-eeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCC
Q 046746 24 AGSPTFFFTWNVTYGT--ISPLGIP-QQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGV 99 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~--~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv 99 (561)
+.+.+++|+|++++.. +.+||+. +.+|+|||++|||+|++++||+|+|+|+|+| +++++|||||+++.+++++||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3567899999999999 8999999 9999999999999999999999999999999 6899999999999989999999
Q ss_pred Ccc-CCccCC-CCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCCCCCCce-EEEecceeecchH
Q 046746 100 LGT-NCPIPP-GKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDF-TLLIGDWYTRSHV 176 (561)
Q Consensus 100 ~~~-q~~i~P-G~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~ 176 (561)
+++ ||+|+| |++|+|+|++ .++||||||||.+.|+.+||+|+|||+++.. .+| |.|. +|+|+||+++...
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~----d~d~~~l~l~Dw~~~~~~ 181 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LPY----DIDLGVFPITDYYYRAAD 181 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC----SEEEEEEEEEEECSSCHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CCC----cccceEEEEeccccCCHH
Confidence 997 999999 9999999996 6799999999999999999999999998653 234 6776 9999999999876
Q ss_pred HhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcc
Q 046746 177 ELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH 256 (561)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 256 (561)
++..... .+..+.++.++|||+... .|.. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+
T Consensus 182 ~~~~~~~-~~~~~~~d~~liNG~~~~---~~~~-~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 256 (559)
T 2q9o_A 182 DLVHFTQ-NNAPPFSDNVLINGTAVN---PNTG-EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVP 256 (559)
T ss_dssp HHHHHHT-TSCCCCBSEEEETTBCBC---TTTC-CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEE
T ss_pred HHhhhhh-cCCCCccceeEECCcccc---CcCC-CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcc
Confidence 6543222 223456789999999862 2211 1235799999999999999999999999999999999999999999
Q ss_pred cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEe--ec---cCCcceeEEEEEecCCCCCCCCCCCCCC--CCccccc
Q 046746 257 VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIAST--RF---TRTVITTTAIVRYSDSKGLASPDLPKAP--VGWDWSL 329 (561)
Q Consensus 257 ~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~--~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p--~~~~~~~ 329 (561)
++|..++++.|+|||||||+|++++.+|+|||++.. .. ........++|+|.+.... +|..+ ...+
T Consensus 257 ~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~--- 329 (559)
T 2q9o_A 257 VNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG----LPTDEGTPPVD--- 329 (559)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS----CCCCCCCCCCC---
T ss_pred cCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC----CCCCCCCcCCC---
Confidence 999999999999999999999999778999999986 21 1123356899999876421 12111 0000
Q ss_pred cccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccC-CCCchhhhhhcCCCCcccccC
Q 046746 330 NQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVN-SETPLKFAEYYGIPEEVFKYN 408 (561)
Q Consensus 330 ~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~-~~~P~l~~~~~~~~~~~~~~~ 408 (561)
..+.+. ..+.+..+.+.|...+ ....++++.+.... ..++...|+|||++|.. +..|+|.....+. .
T Consensus 330 ~~~~~~-~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~--~----- 397 (559)
T 2q9o_A 330 HQCLDT-LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGN--T----- 397 (559)
T ss_dssp CTTCCC-SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC--C-----
T ss_pred cccccc-cccccCCCCCCCCccc---ccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCC--c-----
Confidence 000000 1122211111111111 01123444443321 12345679999999975 4678765433211 0
Q ss_pred CCCCCCCcccccccccceEEecCC-CcEEEEEEEcCC----CCCCceeecCCceEEEeecC---------CCCCcCC-CC
Q 046746 409 VISDKPADEIENVTLQPNVMDATY-KAFMEIVLENRQ----NTMQSWILDGYAFFAVGMEP---------GTWNPDK-RK 473 (561)
Q Consensus 409 ~~~~~p~~~~~~~~~~~~~~~~~~-g~~ve~vl~N~~----~~~HP~HlHG~~F~Vl~~~~---------g~~~~~~-~~ 473 (561)
....+.+++.++. +++++|+++|.+ .+.||||||||+||||+++. |.|++.. ..
T Consensus 398 -----------~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~ 466 (559)
T 2q9o_A 398 -----------SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLA 466 (559)
T ss_dssp -----------CCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGG
T ss_pred -----------cCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCcccccc
Confidence 0113456677765 578888899976 78999999999999999987 6666431 24
Q ss_pred CCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCcccccccCC--CC-ccccccCcc
Q 046746 474 SYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNM--PD-NALLCGIVA 550 (561)
Q Consensus 474 ~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~ 550 (561)
.+|+.+|.|||||.|++++|++|||+|||||.|||||||++|++.|||++|.|...+ +.+..++ |+ ..+.|+.+.
T Consensus 467 ~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD--LRQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp GCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH--HGGGCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch--hhhccccCCchhhhhhccccc
Confidence 588999999999999999999999999999999999999999999999999886433 3334433 54 568998776
Q ss_pred CC
Q 046746 551 NM 552 (561)
Q Consensus 551 ~~ 552 (561)
.-
T Consensus 545 ~~ 546 (559)
T 2q9o_A 545 AY 546 (559)
T ss_dssp HH
T ss_pred cc
Confidence 53
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-86 Score=706.46 Aligned_cols=402 Identities=20% Similarity=0.262 Sum_probs=324.7
Q ss_pred CCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCC
Q 046746 25 GSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNC 104 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~ 104 (561)
.+++++|+|+++++.++++|.++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||++ +
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~---~ 87 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF---L 87 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---C
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---c
Confidence 4578999999999999999999999999999999999999999999999999999999999999885 4899987 5
Q ss_pred ccCCCCeEEEEEEec-CceeeeeEecCch----hhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhh
Q 046746 105 PIPPGKNYTYYLQVK-DQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~-~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
.|+||++|+|+|+++ +++||||||||.+ .|+.+||+|+|||+++.+...... .++|++|+++||+++... +.
T Consensus 88 ~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~--~~~e~~l~l~D~~~~~~~-~~ 164 (439)
T 2xu9_A 88 EIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELR--EAEEHLLVLKDLALQGGR-PA 164 (439)
T ss_dssp CBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHH--TSEEEEEEEEEECEETTE-EC
T ss_pred cCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCC--CCCcEEEEEEeeeeCCCC-cC
Confidence 799999999999985 4799999999974 799999999999998653211111 378999999999997531 10
Q ss_pred hhhcCC-CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc-
Q 046746 180 KQLDSG-KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV- 257 (561)
Q Consensus 180 ~~~~~~-~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~- 257 (561)
.....+ .....++.++|||+.. |.++|++| +|||||||+|+.+.+.|+|+||+|+||+.||+++
T Consensus 165 ~~~~~~~~~g~~~~~~~iNG~~~-------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~ 230 (439)
T 2xu9_A 165 PHTPMDWMNGKEGDLVLVNGALR-------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLE 230 (439)
T ss_dssp CCCHHHHHHCCCCSEEEETTEES-------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred CCCccccccCCCCCEEEECCccC-------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCC
Confidence 000000 0113468999999997 99999999 9999999999999999999999999999999997
Q ss_pred ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC------------------CcceeEEEEEecCCCCCCCCCCC
Q 046746 258 VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR------------------TVITTTAIVRYSDSKGLASPDLP 319 (561)
Q Consensus 258 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~------------------~~~~~~ail~y~~~~~~~~~~~p 319 (561)
+|..++++.|+|||||||+|++++ +|+|+|++...... ......++++|.+.... .++|
T Consensus 231 ~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p 307 (439)
T 2xu9_A 231 EPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLP 307 (439)
T ss_dssp EEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCC
T ss_pred CceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCc
Confidence 899999999999999999999995 89999999743221 11246788899765421 1222
Q ss_pred CCCCCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcC
Q 046746 320 KAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYG 399 (561)
Q Consensus 320 ~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~ 399 (561)
. . +.+....+.+ ..++++.|.... .+ ..|+|||++|..+..+
T Consensus 308 ~---~--------------l~~~~~l~~~---------~~~r~~~l~~~~---~g-~~~~iNg~~~~~~~~~-------- 349 (439)
T 2xu9_A 308 K---A--------------LSPFPTLPAP---------VVTRRLVLTEDM---MA-ARFFINGQVFDHRRVD-------- 349 (439)
T ss_dssp S---C--------------CCCCCCCCCC---------SEEEEEEEEEEG---GG-TEEEETTBCCCTTCCC--------
T ss_pred c---c--------------CCCcccCCCC---------CcceEEEEEeec---cC-ceEeECCEECCCCCCc--------
Confidence 1 0 0000000101 123666665432 11 2599999998643211
Q ss_pred CCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCC
Q 046746 400 IPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLID 479 (561)
Q Consensus 400 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~ 479 (561)
+.++.|++++|+|+|.+.+.||||||||+||||+++.+.+ .+
T Consensus 350 ----------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~ 391 (439)
T 2xu9_A 350 ----------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PY 391 (439)
T ss_dssp ----------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SS
T ss_pred ----------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CC
Confidence 3468899999999999999999999999999999975432 36
Q ss_pred CCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 480 AVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 480 P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||||.|++++|++|||++||||.|+|||||++|++.|||..++|+
T Consensus 392 p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 392 RAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp CCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 899999999999999999999999999999999999999999999984
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-85 Score=696.42 Aligned_cols=403 Identities=17% Similarity=0.179 Sum_probs=321.6
Q ss_pred CeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCc
Q 046746 27 PTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCP 105 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~ 105 (561)
.+++|+|++++..+++ +|.++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.++ +||+| ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 4689999999999998 799999999999999999999999999999999999999999999998764 99999 899
Q ss_pred cCCCCeEEEEEEecCceeeeeEecCc----hhhhccCceeEEEEecCCCCCC--CCCCCCCCceEEEecceeecchHHhh
Q 046746 106 IPPGKNYTYYLQVKDQIGSYIYHPST----GFHRAAGGFGGLCIHSRSVVPV--PYNRFVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 106 i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~--~~~~~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
|+||++|+|+|++.+++||||||||. ..|+.+||+|+|||+++..... |..+ .++|++|+++||+++.+.++.
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y-~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHY-GVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCB-TTTEEEEEEEEEEECTTSCEE
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccC-CCceEEEEEEeeecCCCCcee
Confidence 99999999999986569999999998 5899999999999998754322 2221 478999999999998765543
Q ss_pred hhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEE-eCcccEEEeecCccc-
Q 046746 180 KQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI-QGHTMKLVEMEGSHV- 257 (561)
Q Consensus 180 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~- 257 (561)
.. ..+.....++.++|||+.. |.++|++| +|||||||+|+.+.+.|+| +||+|+||+.||+++
T Consensus 172 ~~-~~~~~~~~~d~~liNG~~~-------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 172 YN-EPGSGGFVGDTLLVNGVQS-------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp CC-CCSSSCCCCSEEEETTEES-------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred cc-cccCCCCcCCEEEECCccc-------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 21 1222345679999999998 99999999 9999999999999999999 899999999999997
Q ss_pred ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC-----------CcceeEEEEEecCCCCCCCCCCCCCCCCcc
Q 046746 258 VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR-----------TVITTTAIVRYSDSKGLASPDLPKAPVGWD 326 (561)
Q Consensus 258 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~ 326 (561)
+|..++++.|+|||||||+|+++ ++++|+|++...... ......++++|........ .....|.
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p~--- 311 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLPM--- 311 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS---
T ss_pred CceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCcc---
Confidence 79999999999999999999999 578999997653211 1122357788865432110 0000010
Q ss_pred ccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccc
Q 046746 327 WSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFK 406 (561)
Q Consensus 327 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~ 406 (561)
.|.+....+. ....++++.|.. .|+|||++|..+..
T Consensus 312 -----------~L~~~~~~~~--------~~~~~~~~~l~~---------~~~iNg~~f~~~~~---------------- 347 (451)
T 2uxt_A 312 -----------RLLPTEIMAG--------SPIRSRDISLGD---------DPGINGQLWDVNRI---------------- 347 (451)
T ss_dssp -----------CSSSSCCCCC--------CCSEEEEEEECS---------SSSBTTBCCCTTCC----------------
T ss_pred -----------ccCCCCCCCC--------CCcceEEEEEee---------EEEECCEeCCCCCC----------------
Confidence 1111110010 112456666541 48999999864311
Q ss_pred cCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEE
Q 046746 407 YNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTI 486 (561)
Q Consensus 407 ~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv 486 (561)
.+.++.|++++|+|+|. +.||||||||+||||++++. .+++.+|.|||||
T Consensus 348 --------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDTv 397 (451)
T 2uxt_A 348 --------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDTV 397 (451)
T ss_dssp --------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSEE
T ss_pred --------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccEE
Confidence 13568899999999997 78999999999999999632 1456689999999
Q ss_pred EeCCCcEEEEEEEeCCcce----eeeecccchhhhccceEEEEEecCC
Q 046746 487 QVFPNCWAAILVSMDNAGM----WNLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 487 ~vp~~g~~~irf~adnpG~----w~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
.| +++++|+|++||||. |||||||++|++.|||+.|.|.+.+
T Consensus 398 ~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 398 WV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99 899999999999988 9999999999999999999998654
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-83 Score=691.19 Aligned_cols=418 Identities=14% Similarity=0.146 Sum_probs=325.1
Q ss_pred CeEEEEEEEEEEE--ecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCC
Q 046746 27 PTFFFTWNVTYGT--ISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNC 104 (561)
Q Consensus 27 ~~~~~~l~~~~~~--~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~ 104 (561)
.+++|+|++++.. +.++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.. ++||++ ||
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~ 110 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--ED 110 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CC
Confidence 3578999999755 56789899999999999999999999999999999999999999999998864 699987 89
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCCCCCCCCC-CCCceEEEecceeecchHHhh
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVPVPYNRF-VEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~-~~~e~~l~~~d~~~~~~~~~~ 179 (561)
+|.||++|+|+|++.+++||||||||.+ .|+++||+|+|||+++.+...+++.. .+.|++|+|+||+++.+.++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999766689999999986 57899999999999986554433210 256889999999987665442
Q ss_pred hhhcCC-CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeC-------cccEEEe
Q 046746 180 KQLDSG-KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQG-------HTMKLVE 251 (561)
Q Consensus 180 ~~~~~~-~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via 251 (561)
.. .+ .....++.++|||+.+ |.++|++ ++|||||||+|+.+.+.|+|++ |+|+||+
T Consensus 191 ~~--~~~~~~~~gd~~lvNG~~~-------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 191 TT--NGELNSFWGDVIHVNGQPW-------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp CC--TTCSSCCCCSEEEETTEES-------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred cc--CCCCccccCceeccCCccC-------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 21 11 1223578999999998 8899998 5999999999999999999987 9999999
Q ss_pred ecCcc-cceeeeeeEEEcccceEEEEEEeCCCCC-ceEEEEEeecc------CCcceeEEEEEecCCCCCCCCCCCCCCC
Q 046746 252 MEGSH-VVQNEYESLDVHVGQCFTVLVTANQDPK-DYYLIASTRFT------RTVITTTAIVRYSDSKGLASPDLPKAPV 323 (561)
Q Consensus 252 ~DG~~-~~p~~~~~v~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~~------~~~~~~~ail~y~~~~~~~~~~~p~~p~ 323 (561)
+||++ .+|..+++|.|+|||||||+|++++.+| +|+|++..... .......++++|..............|
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P- 333 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP- 333 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC-
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc-
Confidence 99985 5899999999999999999999997677 69999753110 111234578888654321000000001
Q ss_pred CccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCc
Q 046746 324 GWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEE 403 (561)
Q Consensus 324 ~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~ 403 (561)
..+.+. +.|.+. ...++++.|... + ..|+|||++|..+..|++
T Consensus 334 -------------~~L~~~-~~p~~~-------~~~~~~~~~~~~----~--~~w~iNG~~f~~~~~p~l---------- 376 (534)
T 3abg_A 334 -------------ANLRDV-PFPSPT-------TNTPRQFRFGRT----G--PTWTINGVAFADVQNRLL---------- 376 (534)
T ss_dssp -------------CCCCCC-SCCCCC-------CCCCEEEECSCC----C--STTCCCCBTTBCTTSCCC----------
T ss_pred -------------cccccC-CCCCCc-------cccceEEEEecc----C--ceeEECCcccCCCCCcce----------
Confidence 011110 011111 124567766431 1 248999999976544421
Q ss_pred ccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCc
Q 046746 404 VFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVS 482 (561)
Q Consensus 404 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~ 482 (561)
..++.|++++|+|+|.+ .+.||||||||+||||+++.|.+.. ..+++.+ .|
T Consensus 377 ------------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~ 428 (534)
T 3abg_A 377 ------------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GL 428 (534)
T ss_dssp ------------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SC
T ss_pred ------------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CC
Confidence 23578999999999987 4699999999999999996553321 1245556 89
Q ss_pred eeEEEeCCCcEEEEEEE-eCCcceeeeecccchhhhccceEEEEEecCC
Q 046746 483 RYTIQVFPNCWAAILVS-MDNAGMWNLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 483 rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
||||.|+|+++++|||+ +||||.|||||||++|++.|||+.|.|...+
T Consensus 429 rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 429 KDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp BSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred cCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 99999999999999998 8999999999999999999999999998765
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-82 Score=672.69 Aligned_cols=407 Identities=22% Similarity=0.255 Sum_probs=315.1
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 24 AGSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
+.+++++|+|++++...++ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++ ++++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc--
Confidence 5668899999999999996 699999999999999999999999999999999999999999999987 46899998
Q ss_pred CCccCCCCeEEEEEEecCc-eeeeeEecCc----hhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH
Q 046746 103 NCPIPPGKNYTYYLQVKDQ-IGSYIYHPST----GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE 177 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 177 (561)
||+|.||++|+|+|+++++ +||||||||. ..|+.+||+|+|||+++......+ +.++ |+++||+++.+++
T Consensus 122 q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~----~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL----KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS----EEEE-EEEEEECCBTTSC
T ss_pred cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC----Ccee-EEEEEEeccCCCc
Confidence 8999999999999998644 8999999997 489999999999999976543333 4454 9999999986654
Q ss_pred hhhh-hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcc
Q 046746 178 LGKQ-LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH 256 (561)
Q Consensus 178 ~~~~-~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 256 (561)
+... .........++.++|||+.. |.++|++|+ ||||||+|+.+.+.|+|+||+|+||+.||++
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~-------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~ 261 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK-------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGL 261 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES-------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEE
T ss_pred cccccchhhccCCcCCEEEECCccC-------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCc
Confidence 3200 00000123568999999998 999999998 9999999999999999999999999999877
Q ss_pred c-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC-----CcceeEEEEEecCCCCCCCCCCCCCCCCcccccc
Q 046746 257 V-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR-----TVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLN 330 (561)
Q Consensus 257 ~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 330 (561)
+ +|..++++.|+|||||||+|+++ +++.|.+.+...... .......++++..... ...+|.
T Consensus 262 ~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~---------- 328 (481)
T 3zx1_A 262 IEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPK---------- 328 (481)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCS----------
T ss_pred cCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC--CccCCc----------
Confidence 5 79999999999999999999998 578888877432210 0111223333321111 112222
Q ss_pred ccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccC-----Ce--------EEEEEcCeeccCCCCchhhhhh
Q 046746 331 QFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVN-----GK--------VRFAVNGVSYVNSETPLKFAEY 397 (561)
Q Consensus 331 ~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~-----g~--------~~~~iNg~~f~~~~~P~l~~~~ 397 (561)
.+.+....+. ...+|++.|........ +. ..|+|||+.|... .|
T Consensus 329 -------~l~~~~~~~~---------~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-~~------ 385 (481)
T 3zx1_A 329 -------NLKIFKPSEE---------PKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK-RI------ 385 (481)
T ss_dssp -------CSCCCCCCCC---------CCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT-CC------
T ss_pred -------cccCCCCCCC---------CCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCC-Cc------
Confidence 0111000111 11456666643211000 01 1389999887522 11
Q ss_pred cCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEee--cCCCCCcCCCCCC
Q 046746 398 YGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGM--EPGTWNPDKRKSY 475 (561)
Q Consensus 398 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~--~~g~~~~~~~~~~ 475 (561)
.+.++.|++|+|+|.|.+.+.|||||||+.|||+++ +....
T Consensus 386 -----------------------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~-------- 428 (481)
T 3zx1_A 386 -----------------------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ-------- 428 (481)
T ss_dssp -----------------------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE--------
T ss_pred -----------------------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC--------
Confidence 145788999999999999999999999999999998 32211
Q ss_pred CCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 476 NLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 476 n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
...++.|||||.|+|+++++|+|+|||||.|||||||++|+|.|||..|+|.
T Consensus 429 ~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 429 KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1234789999999999999999999999999999999999999999999996
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-81 Score=678.71 Aligned_cols=425 Identities=17% Similarity=0.168 Sum_probs=320.1
Q ss_pred CeEEEEEEEEEEEecC--CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCC----------------------Cee
Q 046746 27 PTFFFTWNVTYGTISP--LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE----------------------PFL 82 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~--dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~----------------------~~~ 82 (561)
+..+|+|++++....+ ++..+.+|+|||++|||+|++++||+|+|+|+|+|++ +++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 4566999999988764 4578999999999999999999999999999999975 899
Q ss_pred eeeCCccCCCCCCCCCCCc--c-CCccCCCCeE---EEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCCC
Q 046746 83 LTWPGIQHKKNSWQDGVLG--T-NCPIPPGKNY---TYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVP 152 (561)
Q Consensus 83 iH~HG~~~~~~~~~DGv~~--~-q~~i~PG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 152 (561)
|||||+++. +++||+|+ + ||+|+||++| +|+|++.+++||||||||.+ .|+++||+|+|||+++.+.+
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999885 57999986 2 8999999555 99999766799999999986 48999999999999976544
Q ss_pred CCCCCCCCCceEEEecceeecchHHhhhhhc-----------CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEc
Q 046746 153 VPYNRFVEDDFTLLIGDWYTRSHVELGKQLD-----------SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKA 221 (561)
Q Consensus 153 ~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~ 221 (561)
.+++. .++|++|+|+||+++.+.++..... .......++++||||+.+ |.+++++
T Consensus 182 ~~lp~-~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~-------------p~~~v~~ 247 (513)
T 2wsd_A 182 LKLPS-DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW-------------PYLEVEP 247 (513)
T ss_dssp GCCCC-GGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES-------------CEEECCS
T ss_pred ccCCC-CCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc-------------ceEEecC
Confidence 33333 4789999999999987654422110 001224679999999998 8999998
Q ss_pred CCEEEEEEEEcCCCceEEEEEeCc-ccEEEeecCccc-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeecc-C--
Q 046746 222 GKVYKYRICNVGVKTSLNFRIQGH-TMKLVEMEGSHV-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFT-R-- 296 (561)
Q Consensus 222 G~~~rlRliN~~~~~~~~~~i~gh-~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~-~-- 296 (561)
++|||||||+|+.+.+.|+|+|| +|+||++||+++ +|..++++.|+|||||||+|++++.+|++......... .
T Consensus 248 -~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~ 326 (513)
T 2wsd_A 248 -RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDV 326 (513)
T ss_dssp -SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSC
T ss_pred -CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccC
Confidence 58999999999999999999999 999999999998 79999999999999999999999767874332221111 0
Q ss_pred CcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeE
Q 046746 297 TVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKV 376 (561)
Q Consensus 297 ~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 376 (561)
......++++|..............|.. +......+ . .....++++.|..... ..+..
T Consensus 327 ~~~~~~~il~~~~~~~~~~~~~~~~p~~--------------l~~~~~~~--~-----~~~~~~~~~~l~~~~~-~~g~~ 384 (513)
T 2wsd_A 327 NPETDANIMQFRVTKPLAQKDESRKPKY--------------LASYPSVQ--H-----ERIQNIRTLKLAGTQD-EYGRP 384 (513)
T ss_dssp CTTTTTEEEEEECCSCCSSCCCCCCCSB--------------CSCCGGGC--C-----CCEEEEEEEEEEEEEC-TTSCE
T ss_pred CCCCCcceEEEEeccCcccCccCCCCcc--------------ccCCCCcc--c-----CCCcceEEEEEEeecC-CCCCc
Confidence 1123357888865431110000001110 00000000 0 0112456666654321 23456
Q ss_pred EEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCc
Q 046746 377 RFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYA 456 (561)
Q Consensus 377 ~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~ 456 (561)
.|+|||++|..+. .+.++.|++++|+|+|.+.+.||||||||+
T Consensus 385 ~~~iNg~~~~~~~-------------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~ 427 (513)
T 2wsd_A 385 VLLLNNKRWHDPV-------------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVS 427 (513)
T ss_dssp EEEETTBCTTSCC-------------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCC
T ss_pred eEeECCccCCCcc-------------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCce
Confidence 7899999885330 023577999999999999999999999999
Q ss_pred eEEEeecCC---CCCcCCCCCCCC---------CCCCceeEEEeCCCcEEEEEEEe-CCcceeeeecccchhhhccceEE
Q 046746 457 FFAVGMEPG---TWNPDKRKSYNL---------IDAVSRYTIQVFPNCWAAILVSM-DNAGMWNLRSNIWERNYLGQQLY 523 (561)
Q Consensus 457 F~Vl~~~~g---~~~~~~~~~~n~---------~~P~~rDTv~vp~~g~~~irf~a-dnpG~w~~HCHil~H~d~GMm~~ 523 (561)
||||+++.+ .|++.. .+++ .++.|||||.|+|+++++|+|++ ||||.|||||||++|++.|||..
T Consensus 428 F~Vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~ 505 (513)
T 2wsd_A 428 FRVLDRRPFDIARYQESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRP 505 (513)
T ss_dssp EEEEEEEEBCHHHHHHHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEE
T ss_pred EEEEEecCcccccccccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCcee
Confidence 999999752 121110 1222 23569999999999999999998 89999999999999999999999
Q ss_pred EEEecC
Q 046746 524 LSVRLH 529 (561)
Q Consensus 524 ~~V~~~ 529 (561)
|+|.++
T Consensus 506 ~~V~~~ 511 (513)
T 2wsd_A 506 MDITDP 511 (513)
T ss_dssp EEEBCC
T ss_pred EEEeCC
Confidence 999754
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-81 Score=666.30 Aligned_cols=390 Identities=17% Similarity=0.228 Sum_probs=305.6
Q ss_pred eEEEEEEEEEEEecCCCeeeeEEEECCc-CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCcc
Q 046746 28 TFFFTWNVTYGTISPLGIPQQGILINGQ-FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPI 106 (561)
Q Consensus 28 ~~~~~l~~~~~~~~~dG~~~~~~~~Ng~-~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i 106 (561)
.++|+|++ |+|||+ +|||+|++++||+|+|+|+|+|+++++|||||+++. +++||+|+ |+|
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i 81 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAI 81 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCB
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccC
Confidence 55677776 999999 999999999999999999999999999999999885 57999996 999
Q ss_pred CCCCeEEEEEEecCceeeeeEecC----chhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhhh
Q 046746 107 PPGKNYTYYLQVKDQIGSYIYHPS----TGFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQL 182 (561)
Q Consensus 107 ~PG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 182 (561)
.||++|+|+|++++++|||||||| ...|+.+||+|+|||+++... .++++ +.+|++|+++||+++. .++....
T Consensus 82 ~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~-d~~e~~l~l~D~~~~~-~~~~~~~ 158 (448)
T 3aw5_A 82 TPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKY-GVNDLPLVISDRRFIG-GAPVYNP 158 (448)
T ss_dssp CTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCB-TTTEEEEEEEEEEEET-TEEECCC
T ss_pred CCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCC-CCceEEEEEEeeccCC-Ccccccc
Confidence 999999999998668999999999 669999999999999997654 22222 2389999999999987 5432210
Q ss_pred --cCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEE--eC---cccEEEeecCc
Q 046746 183 --DSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI--QG---HTMKLVEMEGS 255 (561)
Q Consensus 183 --~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~ 255 (561)
........++.++|||+.. |.++|++| +|||||||+|+.+.+.|+| +| |+|+||+.||+
T Consensus 159 ~~~~~~~~~~~~~~liNG~~~-------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~ 224 (448)
T 3aw5_A 159 TPMEMIAGFLGNAVLVNGVKD-------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQG 224 (448)
T ss_dssp CHHHHHHCCCCSEEEETTEET-------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTE
T ss_pred cccccccCccccEEEECCccc-------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCC
Confidence 0011124678999999998 99999999 9999999999999999999 99 99999999999
Q ss_pred ccc-eeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeecc--------------CCcceeEEEEEecCCCCCCCCCCCC
Q 046746 256 HVV-QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFT--------------RTVITTTAIVRYSDSKGLASPDLPK 320 (561)
Q Consensus 256 ~~~-p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~p~ 320 (561)
+++ |..++++.|+|||||||+|+++ .+.|||++..... .......++++|.+...... |
T Consensus 225 ~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p- 298 (448)
T 3aw5_A 225 FLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP---V- 298 (448)
T ss_dssp EEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC---C-
T ss_pred ccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC---c-
Confidence 998 9999999999999999999997 3789999875421 01124567778865432110 1
Q ss_pred CCCCccccccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCC
Q 046746 321 APVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGI 400 (561)
Q Consensus 321 ~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~ 400 (561)
..+ . .+. .+ +. ....++++.+... ...|+|||++|... .|+
T Consensus 299 --~~L----~-------~lp----~~-~~------~~~~~~~~~l~~~------~~~~~iNg~~~~~~-~p~-------- 339 (448)
T 3aw5_A 299 --EAL----S-------DPP----PE-PP------KPTRTRRFALSLS------GMQWTINGMFWNAS-NPL-------- 339 (448)
T ss_dssp --CCC----S-------CCC----CC-CC------CCSEEEEEEEEEE------TTEEEETTBCCCTT-CTT--------
T ss_pred --ccc----C-------CCC----CC-CC------CCCceEEEEEeCC------CceeeECCCcCCCC-CCc--------
Confidence 110 0 000 00 00 1124567776532 12599999998642 221
Q ss_pred CCcccccCCCCCCCCcccccccccceEEe-cCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCc-CCCCCC--
Q 046746 401 PEEVFKYNVISDKPADEIENVTLQPNVMD-ATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNP-DKRKSY-- 475 (561)
Q Consensus 401 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~-~~~~~~-- 475 (561)
+. ++.|++|+|+|+|.+ .+.||||||||+||||+++ |.+.. .....+
T Consensus 340 ---------------------------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~ 391 (448)
T 3aw5_A 340 ---------------------------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNR 391 (448)
T ss_dssp ---------------------------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTT
T ss_pred ---------------------------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCccccccccccc
Confidence 12 467999999999998 8999999999999999995 44421 111122
Q ss_pred --CCCCCCceeEEEeCCCcEEEEE--EE---eCCcceeeeecccchhhhccceEEEEEe
Q 046746 476 --NLIDAVSRYTIQVFPNCWAAIL--VS---MDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 476 --n~~~P~~rDTv~vp~~g~~~ir--f~---adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+..+|.|||||.|+|+++++|+ |+ +||| |||||||++|++.|||..|.|.
T Consensus 392 ~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 392 GRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp CCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 2345579999999999999665 99 9999 9999999999999999999883
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-80 Score=684.54 Aligned_cols=443 Identities=13% Similarity=0.079 Sum_probs=309.0
Q ss_pred CCCeEEEEEEEEEEEec--CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCC----------------------
Q 046746 25 GSPTFFFTWNVTYGTIS--PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEP---------------------- 80 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~---------------------- 80 (561)
...++.|+|++++...+ +++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~ 108 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccc
Confidence 34567899999888765 456778999999999999999999999999999999654
Q ss_pred -------------------eeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCc----hhhhcc
Q 046746 81 -------------------FLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPST----GFHRAA 137 (561)
Q Consensus 81 -------------------~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~ 137 (561)
++|||||+++. +++||++ ||+|.||++|+|+|++.+++||||||||. ..|+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 67899999874 6799988 99999999999999986678999999997 479999
Q ss_pred CceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhh--h-------cC-----C---CCCCCCCeEEEcCcc
Q 046746 138 GGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ--L-------DS-----G---KLLGKPDGVLINGKS 200 (561)
Q Consensus 138 Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~--~-------~~-----~---~~~~~~~~~liNG~~ 200 (561)
||+|+|||+++.+...+.+. +++|++|+|+||+++.+...... + .. + .....++.++|||+.
T Consensus 185 Gl~G~liI~d~~~~~~~~p~-~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~ 263 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPS-GDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCC-GGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred cceeEEEEcCccccccCCCC-CCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc
Confidence 99999999987655444444 68999999999998765432210 0 00 0 112346899999999
Q ss_pred CCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcc-------cEEEeecCcccc-eeee------eeEE
Q 046746 201 GRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHT-------MKLVEMEGSHVV-QNEY------ESLD 266 (561)
Q Consensus 201 ~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~-------~~via~DG~~~~-p~~~------~~v~ 266 (561)
+ |.+.++. ++|||||||+|+.+.+.|+|++|. |+|||+||++++ |+.+ ++|.
T Consensus 264 ~-------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~ 329 (612)
T 3gyr_A 264 W-------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp S-------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEE
T ss_pred c-------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEE
Confidence 8 8999986 589999999999999999999984 999999999984 5544 5899
Q ss_pred EcccceEEEEEEeCCCCCceEEEEEeeccC--------CcceeEEEEEecCCCC--CCCCCCCCCCCCcccccccccccc
Q 046746 267 VHVGQCFTVLVTANQDPKDYYLIASTRFTR--------TVITTTAIVRYSDSKG--LASPDLPKAPVGWDWSLNQFRSFR 336 (561)
Q Consensus 267 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~--------~~~~~~ail~y~~~~~--~~~~~~p~~p~~~~~~~~~~~~~~ 336 (561)
|+|||||||+|++++.+|.++......... ......++++|..... .....+|.......... .....
T Consensus 330 i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~ 407 (612)
T 3gyr_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRM--SHDIP 407 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCC--CTTSC
T ss_pred eccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccccc--ccccc
Confidence 999999999999997777665544322111 0122345555543221 11111221100000000 00000
Q ss_pred c--cccccCCCCCCCCCCCcCCcCcceEEEEcccee----------------ccCCeEEEEEcCeeccCCCCchhhhhhc
Q 046746 337 W--NLTASAARPNPQGSFHYGGIPINRTIRLANTAH----------------LVNGKVRFAVNGVSYVNSETPLKFAEYY 398 (561)
Q Consensus 337 ~--~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~g~~~~~iNg~~f~~~~~P~l~~~~~ 398 (561)
. ...... .+.... .......+.+..... .......|.+|+..
T Consensus 408 ~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-------------- 467 (612)
T 3gyr_A 408 HGHRLIVLT-PPGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTART-------------- 467 (612)
T ss_dssp CEEEEEEEE-CTTCTT-----TTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECS--------------
T ss_pred ccccccccc-cccccc-----ccccccccccccccccccccccccceeeeccCCCccccccccCcc--------------
Confidence 0 000000 000000 000000000000000 00001112222222
Q ss_pred CCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCC-------
Q 046746 399 GIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDK------- 471 (561)
Q Consensus 399 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~------- 471 (561)
+.....+.++.|++|+|+|+|.+.+.||||||||+||||+++.+......
T Consensus 468 -----------------------~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~ 524 (612)
T 3gyr_A 468 -----------------------FNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTR 524 (612)
T ss_dssp -----------------------TTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEES
T ss_pred -----------------------CCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccc
Confidence 22233466889999999999999999999999999999998653322110
Q ss_pred ---------CCCCCCCCCCceeEEEeCCCcEEEEEEE-eCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 472 ---------RKSYNLIDAVSRYTIQVFPNCWAAILVS-MDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 472 ---------~~~~n~~~P~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
....+..++.|||||.|+++++++|||+ +||||.|||||||++|||.|||+.|+|.+++.
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 525 TPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp SCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 1234567789999999999999999998 79999999999999999999999999998764
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-79 Score=651.09 Aligned_cols=414 Identities=20% Similarity=0.257 Sum_probs=310.0
Q ss_pred CCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCC
Q 046746 25 GSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNC 104 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~ 104 (561)
....++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||+| ||
T Consensus 14 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~ 89 (488)
T 3od3_A 14 TDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QG 89 (488)
T ss_dssp CCTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TC
T ss_pred CCCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cC
Confidence 3456889999999999999999999999999999999999999999999999999999999999886 4699998 89
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCc----hhhhccCceeEEEEecCCCCCCCCCC-CCCCceEEEecceeecchHHhh
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPST----GFHRAAGGFGGLCIHSRSVVPVPYNR-FVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~-~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
+|.||++|+|+|++.+++||||||||. ..|+++||+|+|||+++.....+++. ++.+|++|+|+||+++.+.++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 999999999999986668999999997 47999999999999987543322221 1356999999999997665432
Q ss_pred hhhc--CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEE-eCcccEEEeecCcc
Q 046746 180 KQLD--SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRI-QGHTMKLVEMEGSH 256 (561)
Q Consensus 180 ~~~~--~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~ 256 (561)
...+ .......++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||++
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~-------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~ 235 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIY-------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL 235 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSS-------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE
T ss_pred ccccccccccCCCCCEEEEcCCcC-------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCc
Confidence 2111 001123568999999998 88877 4689999999999999999999 69999999999998
Q ss_pred c-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC-----cceeEEEEEecCCCCCCCCCCCCCCCCcccccc
Q 046746 257 V-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT-----VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLN 330 (561)
Q Consensus 257 ~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 330 (561)
+ +|..+++|.|+|||||||+|+++ +.+.|++++....... ......+++...........+|.
T Consensus 236 l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~---------- 304 (488)
T 3od3_A 236 LPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD---------- 304 (488)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS----------
T ss_pred ccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCc----------
Confidence 6 79999999999999999999998 5788998875432110 00111222222110000111121
Q ss_pred ccccccccccccCCCCCCCCCCCcCCcCcceEEEEccce-------------------e----------ccCCe------
Q 046746 331 QFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTA-------------------H----------LVNGK------ 375 (561)
Q Consensus 331 ~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~-------------------~----------~~~g~------ 375 (561)
.|.+....+.. ....+|++.|.... . ...|.
T Consensus 305 -------~L~~~~~~~~~-------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 370 (488)
T 3od3_A 305 -------TLSSLPALPSL-------EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNH 370 (488)
T ss_dssp -------CCCCCCCCCCC-------TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCC
T ss_pred -------ccccCCCCccc-------ccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccc
Confidence 01000000000 01134555442100 0 00110
Q ss_pred -------EEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCC-CCC
Q 046746 376 -------VRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ-NTM 447 (561)
Q Consensus 376 -------~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~-~~~ 447 (561)
..|+|||++|... .| .+.++.|++++|.|.|.+ .+.
T Consensus 371 g~~~~~~~~~~ING~~~~~~-~~-----------------------------------~~~~~~G~~e~w~l~N~~~~~~ 414 (488)
T 3od3_A 371 GGKFDFHHANKINGQAFDMN-KP-----------------------------------MFAAAKGQYERWVISGVGDMML 414 (488)
T ss_dssp CGGGCGGGCEEETTBCCCTT-CC-----------------------------------SEECCBSSCEEEEEECTTCCCC
T ss_pred cccccccceeeECCeeCCCC-CC-----------------------------------ceEcCCCCEEEEEEEeCCCCCC
Confidence 1379999988532 12 145788999999999988 679
Q ss_pred CceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeC----CcceeeeecccchhhhccceEE
Q 046746 448 QSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMD----NAGMWNLRSNIWERNYLGQQLY 523 (561)
Q Consensus 448 HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~ad----npG~w~~HCHil~H~d~GMm~~ 523 (561)
|||||||++|+|++++..... ..++.|||||.|+ |+++.|+|++| |||.||||||+++|||.|||..
T Consensus 415 Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~ 485 (488)
T 3od3_A 415 HPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLG 485 (488)
T ss_dssp EEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEE
T ss_pred ccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEE
Confidence 999999999999999643222 1245799999999 99999999974 5789999999999999999999
Q ss_pred EEE
Q 046746 524 LSV 526 (561)
Q Consensus 524 ~~V 526 (561)
|+|
T Consensus 486 f~V 488 (488)
T 3od3_A 486 FTV 488 (488)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-54 Score=497.00 Aligned_cols=392 Identities=16% Similarity=0.221 Sum_probs=268.9
Q ss_pred cccCCCeEEEEEEEEEEEec--CCCe--------------------------eeeEE-------EECCc--------CCC
Q 046746 22 VEAGSPTFFFTWNVTYGTIS--PLGI--------------------------PQQGI-------LINGQ--------FPG 58 (561)
Q Consensus 22 ~~a~~~~~~~~l~~~~~~~~--~dG~--------------------------~~~~~-------~~Ng~--------~pg 58 (561)
..+.+.+|+|.+.|.+..+. +.|. .+.++ .||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 34557899999999998754 3332 22233 47777 999
Q ss_pred CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCC----CCCCCCCCCc--c-CCccCCCCeEEEEEEecCc---------e
Q 046746 59 PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHK----KNSWQDGVLG--T-NCPIPPGKNYTYYLQVKDQ---------I 122 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~-q~~i~PG~~~~Y~f~~~~~---------~ 122 (561)
|+||+++||+|+|+|+|+|+++++|||||+++. +.+|+||+++ + ||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999986 4577888887 3 9999999999999998654 5
Q ss_pred eeeeEecCchh--hhccCceeEEEEecCCCCCCCCCCCCCCceEEEec------ceeecchHHhhhhh-cCCCC----C-
Q 046746 123 GSYIYHPSTGF--HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIG------DWYTRSHVELGKQL-DSGKL----L- 188 (561)
Q Consensus 123 Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~------d~~~~~~~~~~~~~-~~~~~----~- 188 (561)
||||||||.+. |+.+||+|+|||+++.....+.+...|+|++|+++ ||++... +...+ +.+.. .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 99999999984 56899999999999865433322213789999999 5554321 11111 11100 0
Q ss_pred --CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeE
Q 046746 189 --GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESL 265 (561)
Q Consensus 189 --~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v 265 (561)
..++.++|||+.+ +..+.+++++|++|||||+|+|.. ..+.|+|+||+|++ +|..+|++
T Consensus 253 ~~~~~~~~~iNG~~~----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv 314 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTF----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTI 314 (1065)
T ss_dssp HHHHTEEEEETTEET----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEE
T ss_pred ccccCcEEEECCccC----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEE
Confidence 0235799999985 234789999999999999999986 68899999999993 57799999
Q ss_pred EEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCC-
Q 046746 266 DVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAA- 344 (561)
Q Consensus 266 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~- 344 (561)
.|.|||||||+|+++ .+|.|+|++...... .....+.++|.+...+.+.+.|..+....+ +..++.+.|++.+...
T Consensus 315 ~I~pGer~dVlv~~~-~pG~y~i~~h~~~h~-~~Gm~~~~~V~~~~~~~~~~~~~g~~~~~~-~i~A~e~~wdy~~~~~~ 391 (1065)
T 2j5w_A 315 NLFPATLFDAYMVAQ-NPGEWMLSCQNLNHL-KAGLQAFFQVQECNKSSSKDNIRGKHVRHY-YIAAEEIIWNYAPSGID 391 (1065)
T ss_dssp EECBTCEEEEEEECC-SCEEEEEEECSHHHH-HTTCEEEEEEECSCCCCCCCCCTTSEEEEE-EEEEEEEEEESCTTSBC
T ss_pred EECCCcEEEEEEEeC-CCeeEEEEecCcchh-hCCCEEEEEEecCCCccccccccccceeEE-EEeceecccccCCCCcc
Confidence 999999999999999 489999999865321 124577888876554333333332111112 3456667777765532
Q ss_pred -----CCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccc
Q 046746 345 -----RPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIE 419 (561)
Q Consensus 345 -----~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 419 (561)
.+++++++ ...+ |.......++..+..++ ++|.+. +|+.+ ....|.. .
T Consensus 392 ~~~~~~~~~~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d~---------------~f~~~-~~~~~~~--~ 444 (1065)
T 2j5w_A 392 IFTKENLTAPGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTDA---------------SFTNR-KERGPEE--E 444 (1065)
T ss_dssp TTTCCBTTCTTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESST---------------TCCSB-CCCCGGG--G
T ss_pred cccccccCCCccc-------chhh-hccCCcccCceEeeeee-ecccCC---------------ceEEc-CcCCccc--c
Confidence 12222211 1111 22222233555555555 555421 12111 0111110 0
Q ss_pred cccccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeec
Q 046746 420 NVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGME 463 (561)
Q Consensus 420 ~~~~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~ 463 (561)
..-.-..++.++.|++++|+|.|.....|+||+||+.|++++.|
T Consensus 445 ~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 445 HLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp GGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred cccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 01122567899999999999999999999999999999987653
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-53 Score=429.16 Aligned_cols=267 Identities=20% Similarity=0.324 Sum_probs=225.1
Q ss_pred CeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CC
Q 046746 27 PTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NC 104 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~ 104 (561)
.||+|+|++++...++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++.+++++||+|++ ||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999887 488899999999999999999999999999999999999999999999888899999987 99
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCchhhh---ccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR---AAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
+|.||++++|+|++ +++||||||||.+.+. .+||+|+|||+++...+.+.+ .++|++|+++||+++.....
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~--~d~e~~l~l~dw~~~~~~~~--- 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKT--VTKDYILMLSDWVSSWANKP--- 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHT--CCEEEEEEEEEECGGGTTCT---
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCccccccc--ccceeEEEEEeecccccccc---
Confidence 99999999999996 6899999999998543 589999999998654322222 38899999999987543211
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc-cee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV-VQN 260 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~ 260 (561)
...+.....++.++|||+.++ ....+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|.
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~----------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP----------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT----------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred ccCCCCCCcCcEEEEcCcCCC----------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 111222235789999999872 12459999999999999999975 679999999999999999998 688
Q ss_pred eeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC-----cceeEEEEEecCCC
Q 046746 261 EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT-----VITTTAIVRYSDSK 311 (561)
Q Consensus 261 ~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~ail~y~~~~ 311 (561)
.+|++.|.||||+||+++++ .||.|.++++...-.. .....++|+|.+..
T Consensus 224 ~~dtv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EESEEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cccEEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999999999998 7999999998653322 13457899998754
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-56 Score=495.94 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=183.2
Q ss_pred CeEEEEEEEEEEEecCC-CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCC----CCCCCCCCCc
Q 046746 27 PTFFFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHK----KNSWQDGVLG 101 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~ 101 (561)
.+....+.++....... |+.+..|+ ++|||+|||++||+|+|+|+|.|+++++|||||+++. +.+++||+++
T Consensus 45 ~~y~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~ 121 (742)
T 2r7e_A 45 VVYKKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQ 121 (742)
T ss_dssp CCEECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCS
T ss_pred CEEEEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCcc
Confidence 34455666666666654 66666664 8999999999999999999999999999999999874 3334444432
Q ss_pred --c-CCccCCCCeEEEEEEecC---------ceeeeeEecCchh--hhccCceeEEEEecCCCCCCCCCCCCCCceEEEe
Q 046746 102 --T-NCPIPPGKNYTYYLQVKD---------QIGSYIYHPSTGF--HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLI 167 (561)
Q Consensus 102 --~-q~~i~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~ 167 (561)
+ ||+|+||++|+|+|++++ ++||||||||.+. |+.+||+|+|||+++......... ..+|+++++
T Consensus 122 ~~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~-~~~e~~l~~ 200 (742)
T 2r7e_A 122 REKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ-TLHKFILLF 200 (742)
T ss_dssp SSSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTT-CCCEECCCE
T ss_pred cccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCc-eeeEEEEEe
Confidence 3 999999999999999854 4699999999985 899999999999997543211111 237888777
Q ss_pred cc------eeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc-eEEE
Q 046746 168 GD------WYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNF 240 (561)
Q Consensus 168 ~d------~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~ 240 (561)
++ |+++........++........+.++|||+.+ ++.+.+++++|++|||||+|++... .+.|
T Consensus 201 ~~~de~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~ 270 (742)
T 2r7e_A 201 AVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSI 270 (742)
T ss_dssp ECCCCSSSSCCCCCC-------CCSCCCCCCCCEETTBCT----------BCCCCCEECSSSCEEEECCCCCSSSCCCCC
T ss_pred ecccCCccccccccccccccCCCccccccCceEEECCccC----------CCCcceEEcCCCEEEEEEEeCCCCCcceEE
Confidence 54 44432211000011111112356789999985 2347899999999999999999875 7899
Q ss_pred EEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 241 RIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 241 ~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
||+||.|+|++ ..+|++.|.|||+++|+++++ .+|.|.++++..
T Consensus 271 hlhGh~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 271 FLEGHTFLVRN--------HRQASLEISPITFLTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp CCTTCCCEETT--------EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSS
T ss_pred EECCCEEEEEe--------EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCCh
Confidence 99999999984 247889999999999999998 799999888743
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-52 Score=423.72 Aligned_cols=267 Identities=24% Similarity=0.405 Sum_probs=224.6
Q ss_pred CeEEEEEEEEEEEecCC-CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CC
Q 046746 27 PTFFFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NC 104 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~ 104 (561)
.+++|+|++++...+++ |.++.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++.+++++||+|++ ||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999875 99999999999999999999999999999999999999999999999988899999987 99
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCchh--hhc-cCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhhhh
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTGF--HRA-AGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ 181 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 181 (561)
+|.||++|+|+|++ +++||||||||... |+. +||+|++||+++.....+.. .++|++++++||++......
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~--- 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKR--VTKDVIMMMSTWESAVADKY--- 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGG--CSEEEEEEEEEECGGGTTCT---
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccccc--CCceEEEEeeheeccccccc---
Confidence 99999999999996 58999999999874 777 99999999998654332222 37899999999986321110
Q ss_pred hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccc-ee
Q 046746 182 LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV-QN 260 (561)
Q Consensus 182 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~-p~ 260 (561)
...+.....++.++|||+.++ ....+++++|++|||||+|++.. .+.|||+||.|+||+.||.+++ |.
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~----------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP----------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT----------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCCccccceEEEccccCC----------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 011112225789999999862 12459999999999999999964 8899999999999999999986 78
Q ss_pred eeeeEEEcccceEEEEEEeCCCCCceEEEEEeecc-----CCcceeEEEEEecCCC
Q 046746 261 EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFT-----RTVITTTAIVRYSDSK 311 (561)
Q Consensus 261 ~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~ 311 (561)
.+|++.|.||||+||+|+++ .+|.|++++....- .......++++|.+..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 89999999999999999998 68999999975532 1223457899998754
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-50 Score=429.12 Aligned_cols=398 Identities=16% Similarity=0.135 Sum_probs=265.6
Q ss_pred ccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 23 EAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
.+.+.+++++++++++....+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||.... .
T Consensus 23 ~~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~----------~ 88 (447)
T 2dv6_A 23 AHAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR----------S 88 (447)
T ss_dssp -CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE----------C
T ss_pred cCCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc----------c
Confidence 3455667777777665544433 456899999 9999999999999999999987799999996321 2
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCCCCCCCC----CCCCceEEEecceeecch--H
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPYNR----FVEDDFTLLIGDWYTRSH--V 176 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~----~~~~e~~l~~~d~~~~~~--~ 176 (561)
+|+|.||++++|.|++ .++||||||||.+.|+.+||.|.|+|+++.......+. ....+++..+ |+..... .
T Consensus 89 ~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~ 166 (447)
T 2dv6_A 89 AIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRI 166 (447)
T ss_dssp CCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEE
T ss_pred ceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEE
Confidence 7999999999999996 46999999999999999999999999986542210000 0011111111 1110000 0
Q ss_pred Hhh-----hhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCC-CceEEEEEeCcccEEE
Q 046746 177 ELG-----KQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGV-KTSLNFRIQGHTMKLV 250 (561)
Q Consensus 177 ~~~-----~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~vi 250 (561)
.+. ..+..| ...+.++|||+.. .|.+++++|+++||||+|.+. ...+.++++|. +
T Consensus 167 ~l~~~~~~~~~~~g---~~~~~~~~NG~~p------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~ 227 (447)
T 2dv6_A 167 DLETVEVKGQLDDN---TTYTYWTFNGKVP------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----T 227 (447)
T ss_dssp EEEEEEEEEEEETT---EEEEEEEETTBBS------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----C
T ss_pred EEEEEEEEEeccCC---ceeEEEEECCccC------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----c
Confidence 000 000011 1246799999863 289999999999999999986 34567777764 3
Q ss_pred eecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeecc-CC-cceeEEEEEecCCCCCCCCCCCCCCCCcccc
Q 046746 251 EMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFT-RT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWS 328 (561)
Q Consensus 251 a~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~ 328 (561)
+.||.+ +++.|.||||++++++++ .+|+||+++..... .+ .....+.+.|.+.. .+|. .+....
T Consensus 228 ~~DG~~------~~~~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~-----~~P~--~d~~~~ 293 (447)
T 2dv6_A 228 GPGGAA------AFTQTDPGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG-----GLPQ--VDREFY 293 (447)
T ss_dssp SGGGGG------GGCCBCTTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTT-----CSCC--CSEEEE
T ss_pred CCCCCC------ccEEeCCCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCC-----CCCC--CCeeEE
Confidence 679874 234699999999999998 57999999974211 11 12345666665432 1221 110000
Q ss_pred ccccccccccccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccC
Q 046746 329 LNQFRSFRWNLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYN 408 (561)
Q Consensus 329 ~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~ 408 (561)
+.. . .+.... ..+. .....+............|.|||+.+...
T Consensus 294 ~~~-~--~~~~~~------~~~~--------~g~~~~~~~~~~~~~~~~~~iNG~~~~~~-------------------- 336 (447)
T 2dv6_A 294 VMQ-G--EIYTVK------SFGT--------SGEQEMDYEKLINEKPEYFLFNGSVGSLT-------------------- 336 (447)
T ss_dssp EEE-E--EECBSS------CTTC--------CEECCBBHHHHHTTCCSEEEETTSTTCCC--------------------
T ss_pred EEe-c--ccccCC------cccc--------cccccCChHHhhccCCCEEEECCcccCCC--------------------
Confidence 000 0 000000 0000 00000000000001123588999875311
Q ss_pred CCCCCCCcccccccccceEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCC-ceeEE
Q 046746 409 VISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV-SRYTI 486 (561)
Q Consensus 409 ~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~-~rDTv 486 (561)
....+.++.|++++|+|+|.+ ...||||||||+|+||+++.+. +..|. +|||+
T Consensus 337 ---------------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~----------~~~p~~~~dtv 391 (447)
T 2dv6_A 337 ---------------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSV----------VSPPLIGVQTV 391 (447)
T ss_dssp ---------------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCS----------SSCCEEEESEE
T ss_pred ---------------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcc----------cCCCcccccEE
Confidence 012466788999999999987 6789999999999999996432 12344 79999
Q ss_pred EeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 487 QVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 487 ~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
.|++|+++.|+|++||||.|+||||+++|++.||++.+.|.....
T Consensus 392 ~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 392 SVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 999999999999999999999999999999999999999976654
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=395.98 Aligned_cols=123 Identities=20% Similarity=0.211 Sum_probs=107.4
Q ss_pred ccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 23 EAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
.+...+|+|+|+|++.. .+.....++.|||++|||+||+++||+|+|+|+|+|+++++|||||+++.. ++||++..
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t 77 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMN 77 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTT
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCC
Confidence 35678999999999753 344555678899999999999999999999999999999999999998864 69999955
Q ss_pred CCccCCCCeEEEEEEecC------------ceeeeeEecCch------hhhccCceeEEEEecCC
Q 046746 103 NCPIPPGKNYTYYLQVKD------------QIGSYIYHPSTG------FHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~ 149 (561)
||+|.||++|+|+|++.+ ++||||||||.+ .|+.+||+|+|||+++.
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCC
Confidence 999999999999999853 379999999984 68999999999999964
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=399.06 Aligned_cols=140 Identities=21% Similarity=0.229 Sum_probs=111.1
Q ss_pred ccccCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC
Q 046746 21 LVEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 21 ~~~a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
...+.+.+|+|+|.+++..... ..+.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +++||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT
T ss_pred CcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCc
Confidence 3556788999999998765221 23445666999999999999999999999999999999999999874 6799999
Q ss_pred ccCCccCCCCeEEEEEEec------------CceeeeeEecCch------hhhccCceeEEEEecCCCCCCCCCCCCCCc
Q 046746 101 GTNCPIPPGKNYTYYLQVK------------DQIGSYIYHPSTG------FHRAAGGFGGLCIHSRSVVPVPYNRFVEDD 162 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e 162 (561)
..||+|.||++|+|+|+++ .++||||||||.+ .|+.+||+|+|||+++.. .. .|+|
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~~----~d~e 171 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--LL----PKRQ 171 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--CC----CSEE
T ss_pred cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc--cC----cccc
Confidence 7799999999999999974 2589999999974 478899999999998642 11 2666
Q ss_pred eEEEecce
Q 046746 163 FTLLIGDW 170 (561)
Q Consensus 163 ~~l~~~d~ 170 (561)
+++++++|
T Consensus 172 ~~l~~~~~ 179 (299)
T 3t9w_A 172 FTVVFNDM 179 (299)
T ss_dssp EEEEEETT
T ss_pred ceeeeeee
Confidence 66665443
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-49 Score=398.91 Aligned_cols=138 Identities=21% Similarity=0.242 Sum_probs=114.8
Q ss_pred cccCCCeEEEEEEEEEEEecCCCee-eeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC
Q 046746 22 VEAGSPTFFFTWNVTYGTISPLGIP-QQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 22 ~~a~~~~~~~~l~~~~~~~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
+.+.+.+|+++|.+++ .++|.. +.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +.+||++
T Consensus 7 ~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCc
Confidence 4556678999998753 356644 556778999999999999999999999999999999999999875 5699999
Q ss_pred ccCCccCCCCeEEEEEEec------------CceeeeeEecCch------hhhccCceeEEEEecCCCCCCCCCCCCCCc
Q 046746 101 GTNCPIPPGKNYTYYLQVK------------DQIGSYIYHPSTG------FHRAAGGFGGLCIHSRSVVPVPYNRFVEDD 162 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e 162 (561)
..||+|.||++|+|+|++. .++||||||||.. .|+.+||+|+|||+++.. .. .|+|
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~~----~d~e 155 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--VL----PDRT 155 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--BC----CSEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc--cc----cccc
Confidence 8899999999999999853 3579999999975 357899999999999653 12 3778
Q ss_pred eEEEecce
Q 046746 163 FTLLIGDW 170 (561)
Q Consensus 163 ~~l~~~d~ 170 (561)
++|+++||
T Consensus 156 ~~l~~~d~ 163 (313)
T 3tas_A 156 HTIVFNDM 163 (313)
T ss_dssp EEEEEETT
T ss_pred ceeeccch
Confidence 88877665
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=398.53 Aligned_cols=267 Identities=21% Similarity=0.348 Sum_probs=220.6
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC--CCeeeeeCCccCCCCCCCCCCC
Q 046746 24 AGSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD--EPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
..+++++|+|++++...++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 3558899999999999987 799999999999999999999999999999999996 58999999984 378876
Q ss_pred ccCCccCCCCeEEEEEEecCceeeeeEecCc---hhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH
Q 046746 101 GTNCPIPPGKNYTYYLQVKDQIGSYIYHPST---GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE 177 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 177 (561)
.. ..|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++. .+ . .|+|++++++||+++....
T Consensus 109 ~~-~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~p--~-~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AA-TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--LP--K-VDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TT-TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC--C-CSEEEEEEEEEECBSSCTT
T ss_pred cc-eeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--CC--C-CceEEEEEeeeeeccCccc
Confidence 43 459999999999996 679999999997 4799999999999998642 22 1 3889999999999864211
Q ss_pred hhhh--hc-CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecC
Q 046746 178 LGKQ--LD-SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEG 254 (561)
Q Consensus 178 ~~~~--~~-~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 254 (561)
.... .+ .......++.++|||+.++++ ..+.+++++|++|||||+|+|+...+.|+|+||.|+||+.||
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~--------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG 253 (327)
T 1kbv_A 182 AQGLQPFDMDKAVAEQPEYVVFNGHVGALT--------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEG 253 (327)
T ss_dssp CCEEECBCHHHHHHTCCSEEEETTSTTTTS--------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGG
T ss_pred cccccccChhHhccCCCceEEEcCcccCCC--------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCC
Confidence 0000 00 000012468999999987210 126799999999999999999989999999999999999999
Q ss_pred cccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCC
Q 046746 255 SHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSK 311 (561)
Q Consensus 255 ~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 311 (561)
.+++|..++++.|+||||+||+|+++ .+|+|+|++............|+++|.+..
T Consensus 254 ~~~~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 254 GKLINENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp SSCEECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CcCCCCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 99999999999999999999999999 689999999865432233568999998765
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-47 Score=379.02 Aligned_cols=237 Identities=20% Similarity=0.325 Sum_probs=205.1
Q ss_pred CCCeEEEEEEEEEEEecCC-CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-
Q 046746 25 GSPTFFFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT- 102 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~- 102 (561)
...+++|+|++++...++. |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++ ..++||+|+.
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCcc
Confidence 3457899999999988764 9999999999999999999999999999999999999999999996 3689999987
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCch---hhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhh
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG---FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
||+|+||++++|+|++ +++||||||||.+ .|+.+||+|+|||+++...+ + .++|++|+++||+.++
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~-~----~d~e~~l~~~d~~~~~----- 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-P----ADDEMVMVMNGYNTDG----- 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC-C----CSEEEEEEEEEECCSS-----
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC-C----CcceEEEEEeeEecCC-----
Confidence 9999999999999996 7899999999997 68999999999999975432 2 3789999999998651
Q ss_pred hhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc-eEEEEEeCcccEEEeecCcccc
Q 046746 180 KQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNFRIQGHTMKLVEMEGSHVV 258 (561)
Q Consensus 180 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~ 258 (561)
+ ..++.++|||+.+. + ..+.++++.|+++||||+|++... .+.|||+||.|+|++.++....
T Consensus 177 -----g---~~~~~~~iNG~~~~--~-------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~ 239 (288)
T 3gdc_A 177 -----G---DDNEFYSVNGLPFH--F-------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTP 239 (288)
T ss_dssp -----T---TCCSEEEETTSTTH--H-------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSC
T ss_pred -----C---CCcceEEECccccc--c-------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCC
Confidence 1 13578999999861 0 014699999999999999999754 7899999999999984443335
Q ss_pred eeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 259 QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 259 p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
+...|++.|.||||++|+++++ .||.|.++++..
T Consensus 240 ~~~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 240 SEYTDTISQVQGQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp SEEESEEEEETTCEEEEEECCC-SCEEEEEECSSH
T ss_pred CceeeEEEeCCCceEEEEEECC-CCEEEEEEecCh
Confidence 6889999999999999999998 899999998743
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=439.30 Aligned_cols=396 Identities=13% Similarity=0.125 Sum_probs=261.7
Q ss_pred eeeeEEEECCcCCC--CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCC-CCCCCCCCccCCccCCCCeEEEEEEecCc
Q 046746 45 IPQQGILINGQFPG--PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKK-NSWQDGVLGTNCPIPPGKNYTYYLQVKDQ 121 (561)
Q Consensus 45 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~ 121 (561)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.++||++.+.|+|.||.+++|.|++ ++
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg~~~t~~~~~-~~ 691 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWP-DT 691 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESEEEECTTCEEEEEECC-CS
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecceEeecCCceEEEEEec-CC
Confidence 56789999999999 889999999999999976 4569999999998 99999998777999999999999995 68
Q ss_pred eeeeeEecCchhhhccCceeEEEEecCCCCCCC-CCCCCCCceEEEe----cceeecchHHhhhhh--cCCCCCCCCCeE
Q 046746 122 IGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVP-YNRFVEDDFTLLI----GDWYTRSHVELGKQL--DSGKLLGKPDGV 194 (561)
Q Consensus 122 ~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~-~~~~~~~e~~l~~----~d~~~~~~~~~~~~~--~~~~~~~~~~~~ 194 (561)
+||||||||...|+.+||.|.++|+++.....+ ++. +.|.++.+ .||++.....+...+ ..+.. +...
T Consensus 692 ~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~y--d~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~ 766 (1065)
T 2j5w_A 692 EGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFY--LGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNA 766 (1065)
T ss_dssp CEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCC--SEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCT
T ss_pred CeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCC--CcceEEEEeeeeccccCCcchhhhhhccCCCccC---ccce
Confidence 999999999999999999999999987543333 433 78889999 899997654322111 01110 2223
Q ss_pred EEcCccC------C---C-CCCCCC-------------CCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEe
Q 046746 195 LINGKSG------R---L-DYDSDG-------------KGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVE 251 (561)
Q Consensus 195 liNG~~~------~---~-~~~~~~-------------~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 251 (561)
++|+... + | .|.++. .+.+.|.|++++|+++++|+.|... ..+.++.+| +.+..
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HG--l~~~~ 843 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHG--VQTES 843 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESS--CBCSC
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecc--ccccC
Confidence 3333211 0 0 011110 1234589999999999999999966 455666666 44333
Q ss_pred ecCcccceeeeeeEEEcccceEEEEEEeCCC---------CCceEEEEEeeccCCc-ceeEEEEEecCCCCCCCCCCCCC
Q 046746 252 MEGSHVVQNEYESLDVHVGQCFTVLVTANQD---------PKDYYLIASTRFTRTV-ITTTAIVRYSDSKGLASPDLPKA 321 (561)
Q Consensus 252 ~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~---------~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~ 321 (561)
. | ...+.||+++...+...+. +|.||.+.+.....+. ....+.|.+....... ....
T Consensus 844 ~-~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~---~~~~ 910 (1065)
T 2j5w_A 844 S-T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK---VFNP 910 (1065)
T ss_dssp S-C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC--------CC
T ss_pred C-C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc---ccCC
Confidence 2 2 1256899998888876542 2589988764321111 1223333333221100 0001
Q ss_pred CCCcccccccc-c--ccccccccc--CCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhh
Q 046746 322 PVGWDWSLNQF-R--SFRWNLTAS--AARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAE 396 (561)
Q Consensus 322 p~~~~~~~~~~-~--~~~~~l~~~--~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~ 396 (561)
+.+.+..+... . ...+-+... ...+.|.. + +.... .+. .....|.|||..|..
T Consensus 911 ~~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~-v-----~~~~~-~~~------~~~~~~~iNG~~~~~--------- 968 (1065)
T 2j5w_A 911 RRKLEFALLFLVFDENESWYLDDNIKTYSDHPEK-V-----NKDDE-EFI------ESNKMHAINGRMFGN--------- 968 (1065)
T ss_dssp CCEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGG-C-----CTTCH-HHH------HHTEEEEETTBCTTC---------
T ss_pred CcceEEEEEEEeecCCcceeeccCcccccCCccc-c-----Ccchh-hhh------ccCceEEECCccCCC---------
Confidence 11111110000 0 000000000 00000000 0 00000 000 011247888876531
Q ss_pred hcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCC
Q 046746 397 YYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKS 474 (561)
Q Consensus 397 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~ 474 (561)
...+.++.|++|+|+|.|.+ .+.||||||||.|+|++++
T Consensus 969 ----------------------------~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------- 1009 (1065)
T 2j5w_A 969 ----------------------------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------- 1009 (1065)
T ss_dssp ----------------------------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT-----------
T ss_pred ----------------------------CccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC-----------
Confidence 11245788999999999975 5789999999999998763
Q ss_pred CCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 475 YNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 475 ~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
|.+||||.|+|+++++|+|++||||.|+||||+++|++.|||..|.|.+.+.
T Consensus 1010 -----p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 -----VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp -----CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred -----CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 5799999999999999999999999999999999999999999999987643
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-46 Score=379.83 Aligned_cols=134 Identities=20% Similarity=0.235 Sum_probs=108.2
Q ss_pred CCCeEEEEEEEEEEEecCCCeee-eEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccC
Q 046746 25 GSPTFFFTWNVTYGTISPLGIPQ-QGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~dG~~~-~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (561)
...+++|+|++++. ++|... .++.+||++|||+|+|++||+|+|+|+|.++++++|||||+++. .++||++..|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 44779999999975 244321 12234899999999999999999999999999999999999876 6799999669
Q ss_pred CccCCCCeEEEEEEecC------------ceeeeeEecCc------hhhhccCceeEEEEecCCCCCCCCCCCCCCceEE
Q 046746 104 CPIPPGKNYTYYLQVKD------------QIGSYIYHPST------GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTL 165 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l 165 (561)
|+|.||++++|+|++.+ ++|+||||||. ..|+.+||+|++||+++... . .|+|+++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~----pd~e~~l 193 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L----PDATHTI 193 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C----CSEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C----CCceEEE
Confidence 99999999999999732 35999999996 36899999999999986431 1 2566666
Q ss_pred Eecc
Q 046746 166 LIGD 169 (561)
Q Consensus 166 ~~~d 169 (561)
+++|
T Consensus 194 ~~~d 197 (343)
T 3cg8_A 194 VFND 197 (343)
T ss_dssp EEET
T ss_pred Eccc
Confidence 6554
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=389.61 Aligned_cols=269 Identities=21% Similarity=0.323 Sum_probs=222.0
Q ss_pred ccCCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC--CCeeeeeCCccCCCCCCCCCC
Q 046746 23 EAGSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD--EPFLLTWPGIQHKKNSWQDGV 99 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv 99 (561)
.+.+++++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 35678899999999999984 899999999999999999999999999999999995 599999999864 6887
Q ss_pred CccCCccCCCCeEEEEEEecCceeeeeEecCc---hhhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchH
Q 046746 100 LGTNCPIPPGKNYTYYLQVKDQIGSYIYHPST---GFHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHV 176 (561)
Q Consensus 100 ~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~ 176 (561)
+.+ .+|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ . .|+|++|+++||+++...
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~-~----~d~e~~l~l~d~~~~~~~ 170 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLA-P----VDREYYLVQGDFYTKGEF 170 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCC-C----CSEEEEEEEEEECBSSCT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCCC-C----CCceEEEEeeeeeccCcc
Confidence 753 469999999999996 679999999974 489999999999999864322 2 389999999999987531
Q ss_pred H-hh-hhhc-CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeec
Q 046746 177 E-LG-KQLD-SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEME 253 (561)
Q Consensus 177 ~-~~-~~~~-~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 253 (561)
. .. ...+ .......+++++|||+.+. +. ..+.+++++|++|||||+|+|....+.|+|+||.|+||+.|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~liNG~~~~--~~------~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 171 GEAGLQPFDMAKAIDEDADYVVFNGSVGS--TT------DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp TCCEEECBCHHHHHTTCCSEEEETTSTTT--TS------GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred cccccccCChhHhccCCCCEEEECCCcCC--CC------CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 1 00 0000 0001246789999999861 10 12689999999999999999998999999999999999999
Q ss_pred CcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCC
Q 046746 254 GSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKG 312 (561)
Q Consensus 254 G~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 312 (561)
|.+++|..++++.|.||||+||+|+++ .+|+|++++............++++|.+...
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEEecccccccccCceEEEEecCCCC
Confidence 999999999999999999999999999 6899999997553322345689999987653
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=371.30 Aligned_cols=270 Identities=18% Similarity=0.204 Sum_probs=209.9
Q ss_pred ccCCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc
Q 046746 23 EAGSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG 101 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 101 (561)
.+.+.+++|+|++++...++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.+.
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 44568999999999999887 5999999999999999999999999999999999 5799999999876544555444
Q ss_pred cCCccCCCCeEEEEEEecCceeeeeEecCch-----hhhccCceeEEEEecCCCCC----CCCCCCCCCceEEEecceee
Q 046746 102 TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-----FHRAAGGFGGLCIHSRSVVP----VPYNRFVEDDFTLLIGDWYT 172 (561)
Q Consensus 102 ~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~~e~~l~~~d~~~ 172 (561)
+ ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||+++...+ .+++. |+|++|+++||++
T Consensus 104 ~-~~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~--d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 104 L-TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRY--DTVYYIGESDHYI 179 (333)
T ss_dssp G-CCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCC--SEEEEEEEEEECC
T ss_pred e-eEeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCcc--chheeeeeeeecc
Confidence 4 259999999999996 6799999999997 69999999999999764321 23333 8899999999998
Q ss_pred cc--hHHhhhh----------hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEE
Q 046746 173 RS--HVELGKQ----------LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNF 240 (561)
Q Consensus 173 ~~--~~~~~~~----------~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~ 240 (561)
.. +..+..+ ++. .....++.++|||+..++ . ..+.+++++|++||||++|++....+ .
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~--~------~~~~l~v~~Ger~Rl~n~~~~~~~~~-h 249 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGAL--T------GEGALKAKVGDNVLFVHSQPNRDSRP-H 249 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTT--S------GGGCEEEETTCEEEEEEEESSSCBCE-E
T ss_pred CccccccccccccccccccchhHH-hhccCCcEEEECCccccc--C------CCcceEecCCCEEEEEECCCCCcccc-E
Confidence 32 2211100 000 012457899999998521 0 12679999999988877766544333 2
Q ss_pred EEeCcccEEEeecCcccce-e-eeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCC
Q 046746 241 RIQGHTMKLVEMEGSHVVQ-N-EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSK 311 (561)
Q Consensus 241 ~i~gh~~~via~DG~~~~p-~-~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 311 (561)
.+++|.|+|++ ||.++++ . .++++.|.||||+||+|+++ .+|+|+++++...........++++|.+..
T Consensus 250 ~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 250 LIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 37899999999 9999874 3 58999999999999999999 589999999865322124567899998754
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=366.26 Aligned_cols=269 Identities=18% Similarity=0.245 Sum_probs=206.5
Q ss_pred CCCeEEEEEEEEEEEec--CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 25 GSPTFFFTWNVTYGTIS--PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
.+++++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 55789999999999875 5699999999999999999999999999999999973 456777666655566666544
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCCC----CCCCCCCCCceEEEecceeecc
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVVP----VPYNRFVEDDFTLLIGDWYTRS 174 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~~e~~l~~~d~~~~~ 174 (561)
..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||+++...+ .+.. .|+|++|+++||++..
T Consensus 106 -~~i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~--~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 106 -TNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLH--YDRAYTIGEFDLYIPK 181 (336)
T ss_dssp -CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCC--CSEEEEEEEEEECCCB
T ss_pred -EEeCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCccc--CCceeEeeeeeeeecc
Confidence 249999999999996 6799999999985 69999999999999865321 2332 3889999999999852
Q ss_pred h--HHhhhhhcCC---------CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEE-E
Q 046746 175 H--VELGKQLDSG---------KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR-I 242 (561)
Q Consensus 175 ~--~~~~~~~~~~---------~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~-i 242 (561)
+ ..+..+...+ .....++.++|||+.+.+ +..+.+++++|++||| +|++..+.+.|+ |
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~--------~~~~~l~v~~GervRl--in~~~~~~~~~~~i 251 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGAL--------TGANALTAKVGETVLL--IHSQANRDTRPHLI 251 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTT--------SGGGCEEEETTCEEEE--EEEESSSCBCEEET
T ss_pred ccCCceeecccccccccchhhHhhcCCCCEEEECCeeccC--------CCCcceEcCCCCEEEE--EecCCCCccceEEE
Confidence 2 2221110000 012357899999998621 1128899999997765 666666655544 5
Q ss_pred eCcccEEEeecCccccee--eeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCC
Q 046746 243 QGHTMKLVEMEGSHVVQN--EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKG 312 (561)
Q Consensus 243 ~gh~~~via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 312 (561)
+||.|+|++ ||.+++|. .++++.|.||||+||+|+++ .+|+|+++++...........|+++|.+...
T Consensus 252 ~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~-~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 252 GGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcC-CCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 999999998 99998764 47899999999999999999 5899999998653221245678999987653
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=366.36 Aligned_cols=271 Identities=17% Similarity=0.214 Sum_probs=206.4
Q ss_pred ccCCCeEEEEEEEEEEEec--CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC
Q 046746 23 EAGSPTFFFTWNVTYGTIS--PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 23 ~a~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
.+.+++++|+|++++...+ +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 3456889999999999887 459999999999999999999999999999999998 67999999887644344433
Q ss_pred ccCCccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCC----CCCCCCCCCCceEEEecceee
Q 046746 101 GTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVV----PVPYNRFVEDDFTLLIGDWYT 172 (561)
Q Consensus 101 ~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~----~~~~~~~~~~e~~l~~~d~~~ 172 (561)
.. ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++.. +.+.. .|+|++|+++||++
T Consensus 110 ~~-~~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~--~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 AL-TQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLT--YDKIYYVGEQDFYV 185 (340)
T ss_dssp GG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEEC--CSEEEEEEEEEECC
T ss_pred cc-eEeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcC--cceeEEEeeeeeee
Confidence 22 359999999999997 5799999999986 6999999999999986431 12332 38899999999998
Q ss_pred c--chHHhhhh----------hcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEE
Q 046746 173 R--SHVELGKQ----------LDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNF 240 (561)
Q Consensus 173 ~--~~~~~~~~----------~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~ 240 (561)
. .+..+..+ ++. .....++.++|||+.+.. ...+.+++++|+++||++.|++.... ..
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~--------~~~~~l~v~~G~r~Rl~n~~~~~~~~-~~ 255 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL--------TGDHALTAAVGERVLVVHSQANRDTR-PH 255 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT--------SGGGCEEEETTCEEEEEEEESSSCBC-EE
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc--------cCCCceEcCCCCEEEEEECCCCCccc-eE
Confidence 3 22222100 000 012356899999998610 01388999999988776666544333 33
Q ss_pred EEeCcccEEEeecCcccce--eeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCCC
Q 046746 241 RIQGHTMKLVEMEGSHVVQ--NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSKG 312 (561)
Q Consensus 241 ~i~gh~~~via~DG~~~~p--~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 312 (561)
++++|.|+|++ ||.++.+ ..++++.|.||||+||+|+++ .+|+|+++++...........++++|.+...
T Consensus 256 ~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~-~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 256 LIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECC-CCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 48899999997 9998764 358999999999999999999 5899999998653221234568899987553
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=367.51 Aligned_cols=263 Identities=16% Similarity=0.177 Sum_probs=191.0
Q ss_pred CCCeEEEEEEEEEEEec--CC-----------C-eeeeE--EEE----------------CCcCCCCeEEecCCCEEEEE
Q 046746 25 GSPTFFFTWNVTYGTIS--PL-----------G-IPQQG--ILI----------------NGQFPGPNINSTTNDNLVIN 72 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~--~d-----------G-~~~~~--~~~----------------Ng~~pgP~i~v~~Gd~v~v~ 72 (561)
...+|+|-+-|.+..+. +. | +.+.+ ..| ++++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 46789999999998753 22 2 22222 334 34789999999999999999
Q ss_pred EEeCCCCCeeeeeCCccCCCCCCCCCCCcc---------CCccCCCCeEEEEEEecCc-----ee----eeeEecCch--
Q 046746 73 VFNKLDEPFLLTWPGIQHKKNSWQDGVLGT---------NCPIPPGKNYTYYLQVKDQ-----IG----SYIYHPSTG-- 132 (561)
Q Consensus 73 v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~---------q~~i~PG~~~~Y~f~~~~~-----~G----t~wYH~H~~-- 132 (561)
|+|.|+++++|||||+++. +++||+|++ ||+|+||++|+|+|+++++ +| |||||||.+
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999885 579999863 8999999999999998654 57 999999996
Q ss_pred hhhccCceeEEEEecCCCCCC--CCCCCCCCceEEEec------ceeecchHHhhh-hhcCCCCCCCCCeEEEcCccCCC
Q 046746 133 FHRAAGGFGGLCIHSRSVVPV--PYNRFVEDDFTLLIG------DWYTRSHVELGK-QLDSGKLLGKPDGVLINGKSGRL 203 (561)
Q Consensus 133 ~q~~~Gl~G~liV~~~~~~~~--~~~~~~~~e~~l~~~------d~~~~~~~~~~~-~~~~~~~~~~~~~~liNG~~~~~ 203 (561)
.|+.+||+|+|||+++..... ..+. .++|++|+++ ||+++....... ..+. .....++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~-~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~-- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPV-DMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS-EVKNSHEFHAINGMIY-- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCS-SCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS--
T ss_pred ccccccCccCEEEeeCCCcccccCCCC-cceeEEEEEEeecCccccccccCcccccccCCc-chhhcCceeccCCEec--
Confidence 799999999999999754211 1122 3689999999 677654322100 0111 1123468999999985
Q ss_pred CCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc-eEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCC
Q 046746 204 DYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQD 282 (561)
Q Consensus 204 ~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~ 282 (561)
+.|.+++++|++|||||+|++... .+.||+|||.|++++.|| ..++++.|.||||+||+|+++ .
T Consensus 237 ---------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~ 301 (647)
T 1sdd_B 237 ---------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-K 301 (647)
T ss_dssp ---------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-S
T ss_pred ---------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-c
Confidence 238899999999999999999865 889999999999999886 378999999999999999999 6
Q ss_pred CCceEEEEEeeccCCcceeEEEEEecC
Q 046746 283 PKDYYLIASTRFTRTVITTTAIVRYSD 309 (561)
Q Consensus 283 ~g~y~i~~~~~~~~~~~~~~ail~y~~ 309 (561)
+|.|.++++..... .....+++.+..
T Consensus 302 pG~w~~hch~~~h~-~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 302 PGWWLLDTEVGEIQ-RAGMQTPFLIVD 327 (647)
T ss_dssp SEEEEEECCCHHHH-TTTCEEEEEEEC
T ss_pred ceEeecccCccccc-ccccccceeeec
Confidence 89999998854221 122345555543
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=342.08 Aligned_cols=214 Identities=15% Similarity=0.218 Sum_probs=158.6
Q ss_pred eEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccC----CCCCCCCCCCcc---CCccCCCCeEEEEEEecC
Q 046746 48 QGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQH----KKNSWQDGVLGT---NCPIPPGKNYTYYLQVKD 120 (561)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~----~~~~~~DGv~~~---q~~i~PG~~~~Y~f~~~~ 120 (561)
+..++| ++|||+|+|++||+|+|+|+|.|+++++|||||++. .+.+++||++++ ||+|.||++|+|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 345678 689999999999999999999999999999999984 333334444332 799999999999999854
Q ss_pred c---------eeeeeEecCchh--hhccCceeEEEEecCCCC---CCCCCCCCCCceEEEecceeecchHHhhhhhcCCC
Q 046746 121 Q---------IGSYIYHPSTGF--HRAAGGFGGLCIHSRSVV---PVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGK 186 (561)
Q Consensus 121 ~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~ 186 (561)
+ +||||||||... |+.+||+|+|||+++... +.+.. .|+|++++++||... .. ..
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~--~d~e~~l~~~d~d~~--~~------~~- 197 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKM--FEKQHVLMFAVFDES--KS------WN- 197 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSS--SCCCCCCBCCEEETT--SS------SS-
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCc--ccceEEEEEEecccc--cc------cc-
Confidence 4 479999999875 889999999999986421 22222 378999999998421 00 00
Q ss_pred CCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeE
Q 046746 187 LLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESL 265 (561)
Q Consensus 187 ~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v 265 (561)
...++.++|||+.+ +..|.+++++|+++||||+|++.. ..+.||++||.|.+ ||. .+|++
T Consensus 198 -~~~~~~~~ING~~~----------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv 258 (306)
T 1sdd_A 198 -QTSSLMYTVNGYVN----------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAI 258 (306)
T ss_dssp -CCCCEEECSSSCCS----------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCC
T ss_pred -cCCCcceeeCCEec----------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceE
Confidence 12357899999986 234789999999999999999987 57789999999986 773 58999
Q ss_pred EEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 266 DVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 266 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
.|.||||+||+|+++ .+|.|++++...
T Consensus 259 ~l~pger~~v~~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 259 TLVSATSTTANMTVS-PEGRWTIASLIP 285 (306)
T ss_dssp CEETTCCBC---------CCCCCBCCST
T ss_pred EECCCcEEEEEEEcC-CCeEEEEEeCCh
Confidence 999999999999998 789999988743
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-39 Score=341.55 Aligned_cols=264 Identities=19% Similarity=0.243 Sum_probs=211.0
Q ss_pred CCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC--CCeeeeeCCccCCCCCCCCCCCcc
Q 046746 26 SPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD--EPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
+.++.|+|++++....+ +|....+|+|||++|||+|++++||+++|+|.|.++ ..++|||||+. .+||++.+
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 45678899888777666 588899999999999999999999999999999985 57899999984 37998754
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCch---hhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHHhh
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG---FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELG 179 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 179 (561)
..|.||++++|.|++ +++|+||||||.+ .|+.+||+|+|+|+++.. .| . .++|++++++||++.......
T Consensus 236 -~~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P--~-~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 -TQTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP--Q-VDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp -CCBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC--C-CSEEEEEEEEEECBSSCTTCC
T ss_pred -EEeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC--C-CCeeEEEEecccccCCccccc
Confidence 249999999999996 5789999999974 788999999999998642 22 1 378899999999875321000
Q ss_pred h--hhc-CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcc
Q 046746 180 K--QLD-SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH 256 (561)
Q Consensus 180 ~--~~~-~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 256 (561)
. ..+ .......++.++|||+.+++ +..+.+++++|++|||||+|++....+.|||+||.|+||+.||++
T Consensus 309 g~~~~~~~~~~~~~~~~~~iNG~~~~~--------~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~ 380 (447)
T 2dv6_A 309 GEQEMDYEKLINEKPEYFLFNGSVGSL--------TRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSV 380 (447)
T ss_dssp EECCBBHHHHHTTCCSEEEETTSTTCC--------CCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCS
T ss_pred ccccCChHHhhccCCCEEEECCcccCC--------CCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcc
Confidence 0 000 00001246789999998721 012579999999999999999988899999999999999999999
Q ss_pred ccee--eeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEEecCCC
Q 046746 257 VVQN--EYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVRYSDSK 311 (561)
Q Consensus 257 ~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 311 (561)
+++. .+|++.|.||||++|+|+++ ++|.|+++++.... ......++++|.+..
T Consensus 381 ~~~p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h-~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 381 VSPPLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSR-LEHGLVGFLNVDGPK 435 (447)
T ss_dssp SSCCEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGG-GGGTCCEEEEECSCS
T ss_pred cCCCcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCc-cccCCEEEEEEeCCC
Confidence 8754 58999999999999999999 69999999986543 223457899997654
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=369.37 Aligned_cols=250 Identities=14% Similarity=0.199 Sum_probs=196.9
Q ss_pred cCCCeEEEEEEEEEEEe--cCCCe---------------eeeE--EEE-CC---------------cCCCCeEEecCCCE
Q 046746 24 AGSPTFFFTWNVTYGTI--SPLGI---------------PQQG--ILI-NG---------------QFPGPNINSTTNDN 68 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~--~~dG~---------------~~~~--~~~-Ng---------------~~pgP~i~v~~Gd~ 68 (561)
-...+|+|.|.|++... +|+|. .+.+ +.| |+ ++|||+|||++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 35689999999999874 56553 1222 333 22 57999999999999
Q ss_pred EEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecC---------ceeeeeEecCchh--hhcc
Q 046746 69 LVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKD---------QIGSYIYHPSTGF--HRAA 137 (561)
Q Consensus 69 v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~ 137 (561)
|+|+|+|.|+++++|||||+++..... ||+++.||+|+||++|+|+|++++ ++||||||||.+. |+.+
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 999999999999999999999987653 699988999999999999999864 7999999999985 8999
Q ss_pred CceeEEEEecCCCCCC--CCCCCCCCceEEEecc------eeecchHHhhhhhc-CCC-------CCCCCCeEEEcCccC
Q 046746 138 GGFGGLCIHSRSVVPV--PYNRFVEDDFTLLIGD------WYTRSHVELGKQLD-SGK-------LLGKPDGVLINGKSG 201 (561)
Q Consensus 138 Gl~G~liV~~~~~~~~--~~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~-~~~-------~~~~~~~~liNG~~~ 201 (561)
||+|+|||+++..... .... .++|++|++++ |+++.. +..++. ... .....+.++|||+.+
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~-~d~E~vl~~~~~de~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQV-TVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCC-SSEEEECCCCEECCSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred CceeeEEECCCcccccccCCCc-cceEEEEEEeecCccccchhccc--hhhcccCccccccCCccccccCCccccCCccC
Confidence 9999999999753221 1112 47899888754 544322 111111 000 011245789999986
Q ss_pred CCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc-eEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeC
Q 046746 202 RLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT-SLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTAN 280 (561)
Q Consensus 202 ~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 280 (561)
++.+.+++++|++|||||+|++... .+.|||+||.|+|++.||. .+|++.|.||||++|+|+++
T Consensus 365 ----------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 365 ----------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp ----------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS
T ss_pred ----------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC
Confidence 2347899999999999999999754 7899999999999999974 78999999999999999998
Q ss_pred CCCCceEEEEEee
Q 046746 281 QDPKDYYLIASTR 293 (561)
Q Consensus 281 ~~~g~y~i~~~~~ 293 (561)
.+|.|.++++..
T Consensus 430 -~pG~w~~hcH~~ 441 (770)
T 2r7e_B 430 -KAGIWRVECLIG 441 (770)
T ss_dssp -SCBCCCBCCCSH
T ss_pred -CCCceEEEeccc
Confidence 799999998754
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=337.12 Aligned_cols=214 Identities=21% Similarity=0.241 Sum_probs=167.6
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCC-----CCcc-CCccCCCCeEEEEEEecCcee-----
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDG-----VLGT-NCPIPPGKNYTYYLQVKDQIG----- 123 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG-----v~~~-q~~i~PG~~~~Y~f~~~~~~G----- 123 (561)
.+|||+||+++||+|+|+|+|.|+++++|||||+++. .+++|| ++.+ ||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 466765 4444 999999999999999876554
Q ss_pred ----eeeEecCch--hhhccCceeEEEEecCCCC---CCCCCCCCCCceEEEecc------eeecchHHhhhhhc-CCCC
Q 046746 124 ----SYIYHPSTG--FHRAAGGFGGLCIHSRSVV---PVPYNRFVEDDFTLLIGD------WYTRSHVELGKQLD-SGKL 187 (561)
Q Consensus 124 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~---~~~~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~-~~~~ 187 (561)
|||||||.+ .|+.+||+|+|||+++... ..+.+ .|+|++|++++ |+++. .+..+.. ....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~--~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v 602 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIM--SDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGV 602 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSC--CSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCS
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCC--CCceEEEEeecccccccccccc--chhhcccCchhc
Confidence 999999998 4689999999999987421 11222 38899999965 54421 1111111 0000
Q ss_pred -C------CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccce
Q 046746 188 -L------GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQ 259 (561)
Q Consensus 188 -~------~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p 259 (561)
. .....++|||+.+ ++.+ +.+++|++|||||+|+|.. ..+.|||+||.|+|+ +
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~----------~~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~ 663 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVF----------DSLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------M 663 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCS----------SCCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------S
T ss_pred ccccccccccCceeeecCcCC----------CCCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------c
Confidence 0 0113578999986 1224 8999999999999998764 468999999999986 5
Q ss_pred eeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 260 NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 260 ~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
..+|+|.|.||||++|+|+++ .+|.|.++++..
T Consensus 664 ~~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 664 VYEDTLTLFPFSGETVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp SSBCSSCCCCCSSEECCEECC-CCCCSCCEECCC
T ss_pred cceeEEEECCCcEEEEEEEcC-CCeEEEEEeCCc
Confidence 678999999999999999998 789999999865
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=251.42 Aligned_cols=228 Identities=15% Similarity=0.134 Sum_probs=163.7
Q ss_pred CCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 191 PDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 191 ~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
...+++||+.. .|.|+++.|+++++|+.|.... .+.+|++|.. ..+.||.+. .+...|.||
T Consensus 54 ~~~~~~ng~~p------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG 114 (288)
T 3gdc_A 54 FKGWSYNGRIP------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPG 114 (288)
T ss_dssp EEEEEETTBSS------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTT
T ss_pred EEEEEECCccC------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCC
Confidence 35899999974 3999999999999999999875 4589999975 457899864 234578999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeecc-CC-cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFT-RT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNP 348 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p 348 (561)
+++++.++++ .+|.||.+++.... .+ .....+.+.+..... .+. .
T Consensus 115 ~~~~y~f~~~-~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~-----~~~--~------------------------- 161 (288)
T 3gdc_A 115 QSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG-----RPP--A------------------------- 161 (288)
T ss_dssp CEEEEEEECC-SCEEEEEECCCSSHHHHHHTTCEEEEEEECSSC-----CCC--C-------------------------
T ss_pred CEEEEEEEcC-CCccEEEEecCcchHHHHhCcCeEEEEEeCCcc-----CCC--C-------------------------
Confidence 9999999996 89999999985421 11 112233333332210 010 0
Q ss_pred CCCCCcCCcCcceEEEEccce-e--ccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccc
Q 046746 349 QGSFHYGGIPINRTIRLANTA-H--LVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQP 425 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~-~--~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 425 (561)
++++.+.... . .......|+|||+.|... .
T Consensus 162 -----------d~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~~------------------------------------~ 194 (288)
T 3gdc_A 162 -----------DDEMVMVMNGYNTDGGDDNEFYSVNGLPFHFM------------------------------------D 194 (288)
T ss_dssp -----------SEEEEEEEEEECCSSTTCCSEEEETTSTTHHH------------------------------------H
T ss_pred -----------cceEEEEEeeEecCCCCCcceEEECccccccc------------------------------------C
Confidence 0111110000 0 001123489999876311 0
Q ss_pred eEEecCCCcEEEEEEEcCCCC--CCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc
Q 046746 426 NVMDATYKAFMEIVLENRQNT--MQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA 503 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp 503 (561)
..+.++.|++|+|.|.|.+.. .|||||||+.|+|++.+.. +..|.++||+.|+||+++.|+|++++|
T Consensus 195 ~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~p 263 (288)
T 3gdc_A 195 FPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYP 263 (288)
T ss_dssp SCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSC
T ss_pred cccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCC
Confidence 114568899999999998853 5999999999999875421 233589999999999999999999999
Q ss_pred ceeeeecccchhhhccceEEEEEec
Q 046746 504 GMWNLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 504 G~w~~HCHil~H~d~GMm~~~~V~~ 528 (561)
|.|+||||+++|++.|||..|+|.+
T Consensus 264 G~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 264 GKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEEEEEecChHHHhcCCCEEEEEeC
Confidence 9999999999999999999999863
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-28 Score=246.75 Aligned_cols=244 Identities=13% Similarity=0.102 Sum_probs=162.6
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEee---cCcccceeeeeeEEEc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEM---EGSHVVQNEYESLDVH 268 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~~~p~~~~~v~l~ 268 (561)
..+++||+.. .|+|++++|+++|+||+|..... ..+|. |-+.+.+. ||.+. ++...|.
T Consensus 24 ~~~~~NG~~p------------GP~I~v~~Gd~v~v~v~N~l~~~-~siH~--HG~~~~~~~~~DGvp~----vtq~~I~ 84 (339)
T 2zwn_A 24 KVFGFNGQVP------------GPLIHVQEGDDVIVNVTNNTSLP-HTIHW--HGVHQKGTWRSDGVPG----VTQQPIE 84 (339)
T ss_dssp EEEEETTBSS------------CCEEEEETTCEEEEEEEEESSSC-BCCEE--ETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEECCccC------------CCeEEEECCCEEEEEEEECCCCC-ccEEe--CCCCcCCCcccCCCCc----cccCccC
Confidence 5799999963 29999999999999999998754 34444 55666664 99863 2345799
Q ss_pred ccceEEEEEEeCCCCCceEEEEEeeccCC-c-ceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCC
Q 046746 269 VGQCFTVLVTANQDPKDYYLIASTRFTRT-V-ITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARP 346 (561)
Q Consensus 269 pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p 346 (561)
||||+++.++++ .+|+||+++......+ . ....+.+.+..... ..++.. .+.+..+.. . .+.... ...+
T Consensus 85 PG~~~~y~f~~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~-~d~e~~l~l-~--d~~~~~-~~~~ 155 (339)
T 2zwn_A 85 AGDSYTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKR-VTKDVIMMM-S--TWESAV-ADKY 155 (339)
T ss_dssp TTCEEEEEEECC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGG-CSEEEEEEE-E--EECGGG-TTCT
T ss_pred CCCeEEEEEECC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---cccccc-CCceEEEEe-e--heeccc-cccc
Confidence 999999999998 7999999987542111 1 12223232222211 111100 010000000 0 000000 0000
Q ss_pred CCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccce
Q 046746 347 NPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPN 426 (561)
Q Consensus 347 ~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 426 (561)
... .. .......|.|||+.|.. ..
T Consensus 156 ~~~------g~-------------~~~~~~~~~ING~~~~~-------------------------------------~~ 179 (339)
T 2zwn_A 156 GEG------GT-------------PMNVADYFSVNAKSFPL-------------------------------------TQ 179 (339)
T ss_dssp TCC------CS-------------TTSCCCEEEETTBCTTS-------------------------------------SC
T ss_pred CCC------CC-------------CccccceEEEccccCCC-------------------------------------cc
Confidence 000 00 00012347899976521 11
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++++|+|+|.+...||||||||.|+|++.+.. .+.+|.++||+.|+||+++.|+|++||||.|
T Consensus 180 ~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~----------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w 249 (339)
T 2zwn_A 180 PLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGL----------PLDSPYYADTVLVSPGERYDVIIEADNPGRF 249 (339)
T ss_dssp CEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEE
T ss_pred cEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCe----------ecCCCcEEEEEEECCCCEEEEEEEeCCCeeE
Confidence 256788999999999998889999999999999999532 1234788999999999999999999999999
Q ss_pred eeecccchh------hhccceEEEEEecC
Q 046746 507 NLRSNIWER------NYLGQQLYLSVRLH 529 (561)
Q Consensus 507 ~~HCHil~H------~d~GMm~~~~V~~~ 529 (561)
+||||+++| ++.|||+.+.+...
T Consensus 250 ~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 250 IFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred EEEEechhhcccccccCCCcEEEEEECCC
Confidence 999999999 78999999998653
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-28 Score=245.71 Aligned_cols=247 Identities=14% Similarity=0.147 Sum_probs=167.1
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEE-EeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKL-VEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|+|+++.|+++++|+.|... ....+|++|....- .+.||.+- +....|.||
T Consensus 23 ~~~~~ng~~p------------GP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG 85 (318)
T 3g5w_A 23 HTFAFNGQVP------------APLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPG 85 (318)
T ss_dssp EEEEETTBSS------------CCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEECCccC------------CceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCC
Confidence 5799999974 399999999999999999986 45589999886542 36799763 233578999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeeccCCc--ceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFTRTV--ITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNP 348 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p 348 (561)
++++..++++ .+|+||.+++.....+. ....+.|.+..... .+++. ..+.+..+.. .+ +..... ....
T Consensus 86 ~~~~y~f~~~-~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~-~~d~e~~l~l-~d--w~~~~~--~~~~ 155 (318)
T 3g5w_A 86 DTFTYKFKAE-PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEK-TVTKDYILML-SD--WVSSWA--NKPG 155 (318)
T ss_dssp CEEEEEEECC-SCEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHH-TCCEEEEEEE-EE--ECGGGT--TCTT
T ss_pred CEEEEEEEcC-CCEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccc-cccceeEEEE-Ee--eccccc--cccc
Confidence 9999999997 79999999885321111 12233333332210 00100 0000000000 00 000000 0000
Q ss_pred CCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEE
Q 046746 349 QGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVM 428 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 428 (561)
.+ .. .......|.|||+.|.. ...+
T Consensus 156 ~~-----~~-------------~~~~~d~~~ING~~~~~-------------------------------------~~~l 180 (318)
T 3g5w_A 156 EG-----GI-------------PGDVFDYYTINAKSFPE-------------------------------------TQPI 180 (318)
T ss_dssp CC-----CC-------------TTCCCCEEEETTBCBTS-------------------------------------SCCE
T ss_pred cC-----CC-------------CCCcCcEEEEcCcCCCC-------------------------------------CccE
Confidence 00 00 00111248999987521 1125
Q ss_pred ecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeee
Q 046746 429 DATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNL 508 (561)
Q Consensus 429 ~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~ 508 (561)
.++.|++++|+|.|.+...||||||||.|+|++++.+. +..|.++||+.|+||+++.|+|++||||.|+|
T Consensus 181 ~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~ 250 (318)
T 3g5w_A 181 RVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMI 250 (318)
T ss_dssp EECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEE
T ss_pred EeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEE
Confidence 67889999999999998899999999999999986431 23467899999999999999999999999999
Q ss_pred ecccchhhh------ccceEEEEEecCC
Q 046746 509 RSNIWERNY------LGQQLYLSVRLHK 530 (561)
Q Consensus 509 HCHil~H~d------~GMm~~~~V~~~~ 530 (561)
|||+++|++ .|||..++|...+
T Consensus 251 hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 251 HDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999998 6899999986543
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-24 Score=219.53 Aligned_cols=232 Identities=14% Similarity=0.136 Sum_probs=137.1
Q ss_pred EEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccc----eeeeeeEEEcc
Q 046746 194 VLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV----QNEYESLDVHV 269 (561)
Q Consensus 194 ~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~~~v~l~p 269 (561)
.++||... |+|++++|+++++||.|... ..+.+|.||..+. .+.||.+.. +...+...|.|
T Consensus 52 ~~~n~~pG-------------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~P 116 (306)
T 1sdd_A 52 SRTSGLLG-------------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAP 116 (306)
T ss_dssp CSSCCSCC-------------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCT
T ss_pred cccCCccC-------------CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCC
Confidence 45787655 99999999999999999875 5568888887743 267998752 12233567999
Q ss_pred cceEEEEEEeCCCC---------CceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccc
Q 046746 270 GQCFTVLVTANQDP---------KDYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRW 337 (561)
Q Consensus 270 geR~dv~v~~~~~~---------g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~ 337 (561)
|||++..+++++.+ |+||.+++.....+ .+. .++|.+....... .+.+. ..+ .++..
T Consensus 117 G~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~-G~liV~~~~~~~~-~~~~~---~~d------~e~~l 185 (306)
T 1sdd_A 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLI-GPLLICKKGTLTE-DGTQK---MFE------KQHVL 185 (306)
T ss_dssp TCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCC-EEEEEECTTCBCT-TSSBS---SSC------CCCCC
T ss_pred CCeEEEEEEeCCccCCCCCCCCceEEEEeccCCchhhhccCce-EEEEEccCCCCCc-cCCcC---ccc------ceEEE
Confidence 99999999997543 69999997432111 222 2344443221100 01110 000 00000
Q ss_pred cccccCCCCCCCCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcc
Q 046746 338 NLTASAARPNPQGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADE 417 (561)
Q Consensus 338 ~l~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~ 417 (561)
.+.... . ..++ . ......|.|||+.|.. .|
T Consensus 186 ~~~d~d--~--~~~~-------------~-----~~~~~~~~ING~~~~~--~p-------------------------- 215 (306)
T 1sdd_A 186 MFAVFD--E--SKSW-------------N-----QTSSLMYTVNGYVNGT--MP-------------------------- 215 (306)
T ss_dssp BCCEEE--T--TSSS-------------S-----CCCCEEECSSSCCSSC--CC--------------------------
T ss_pred EEEecc--c--cccc-------------c-----cCCCcceeeCCEecCC--Cc--------------------------
Confidence 000000 0 0000 0 0112347888877521 11
Q ss_pred cccccccceEEecCCCcEEEEEEEcCCC--CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEE
Q 046746 418 IENVTLQPNVMDATYKAFMEIVLENRQN--TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAA 495 (561)
Q Consensus 418 ~~~~~~~~~~~~~~~g~~ve~vl~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~ 495 (561)
.+.++.|++++|+|.|.+. ..||||||||.|++ .| .++||+.|.||+.+.
T Consensus 216 ---------~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~ 267 (306)
T 1sdd_A 216 ---------DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTT 267 (306)
T ss_dssp ---------CCCCCCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC
T ss_pred ---------ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEE
Confidence 1346789999999999885 47999999999986 12 358999999999999
Q ss_pred EEEEeCCcceeeeecccchhhhccceEEEEEecC
Q 046746 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 496 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
|+|.+++||.|+||||+++|++.|||..+.|.+.
T Consensus 268 v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 268 ANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp --------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999999999999999999653
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.3e-22 Score=218.80 Aligned_cols=243 Identities=14% Similarity=0.185 Sum_probs=146.4
Q ss_pred CceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccc---e-eeeeeEEEcccceEEEEEEeCCC-----CC
Q 046746 214 EPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV---Q-NEYESLDVHVGQCFTVLVTANQD-----PK 284 (561)
Q Consensus 214 ~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p-~~~~~v~l~pgeR~dv~v~~~~~-----~g 284 (561)
.|+|++++|+++++||.|.... ...+|.||.... .+.||.+.. | ..+....|.|||+++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 4999999999999999999874 458888887664 478998742 1 22335679999999999999864 57
Q ss_pred ----ceEEEEEeeccCC---cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCCcCCc
Q 046746 285 ----DYYLIASTRFTRT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNPQGSFHYGGI 357 (561)
Q Consensus 285 ----~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~ 357 (561)
+||.+++.....+ .+.+ ++|.............|. .+.+..+.. .++ ......... ...
T Consensus 146 ~~c~T~wYHsH~~~~~q~~~GL~G-~lIV~~~~~~~~~~~~~~--~~~e~~l~l-~~~--d~~~~w~~~-~~~------- 211 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDIHSGLIG-PLLICRKGTLDKETNMPV--DMREFVLLF-MVF--DEKKSWYYD-KKP------- 211 (647)
T ss_dssp CSEEEEEEECCSSHHHHHTTTCEE-EEEEECTTSSCTTSCCCS--SCCEEEEEE-EEE--EGGGSSCCC-----------
T ss_pred CCceEEEEccCCCCcccccccCcc-CEEEeeCCCcccccCCCC--cceeEEEEE-Eee--cCccccccc-cCc-------
Confidence 9999998632111 2222 333333221110001111 000100000 000 000000000 000
Q ss_pred CcceEEE-EccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEE
Q 046746 358 PINRTIR-LANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFM 436 (561)
Q Consensus 358 ~~~~~~~-~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~v 436 (561)
...+. +.... ......+.|||+.|. .| .+.++.|+++
T Consensus 212 --~~~~~~~~~~~--~~~~~~~~iNG~~~~---~p-----------------------------------~l~v~~G~~v 249 (647)
T 1sdd_B 212 --TRSWRRASSEV--KNSHEFHAINGMIYN---LP-----------------------------------GLRMYEQEWV 249 (647)
T ss_dssp ----------------CCCEEEEETTBSSC---CC-----------------------------------CCEEETTCEE
T ss_pred --ccccccCCcch--hhcCceeccCCEecC---CC-----------------------------------CeEEcCCCEE
Confidence 00000 00000 011235789998751 11 1346789999
Q ss_pred EEEEEcCCC--CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccch
Q 046746 437 EIVLENRQN--TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWE 514 (561)
Q Consensus 437 e~vl~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~ 514 (561)
+|+|.|.+. ..||||+|||.|+|++.+ +.++||+.|.||+++.|+|++++||.|+||||+++
T Consensus 250 rlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~ 313 (647)
T 1sdd_B 250 RLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGE 313 (647)
T ss_dssp EEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHH
T ss_pred EEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCccc
Confidence 999999874 489999999999998652 35799999999999999999999999999999999
Q ss_pred hhhccceEEEEEecCC
Q 046746 515 RNYLGQQLYLSVRLHK 530 (561)
Q Consensus 515 H~d~GMm~~~~V~~~~ 530 (561)
|++.|||..|.|.+.+
T Consensus 314 h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 314 IQRAGMQTPFLIVDRE 329 (647)
T ss_dssp HHTTTCEEEEEEECTT
T ss_pred ccccccccceeeeccc
Confidence 9999999999997543
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=197.71 Aligned_cols=243 Identities=16% Similarity=0.097 Sum_probs=161.5
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|+|++++|+++++|++|.... ..+.+|+||.. +.||.+. ...|.||
T Consensus 59 ~~~~~ng~~p------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG 116 (327)
T 1kbv_A 59 RYWTFDGDVP------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPG 116 (327)
T ss_dssp EEEEETTBSS------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTT
T ss_pred EEEEECCccC------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCC
Confidence 5799999864 3999999999999999999763 46688888863 5788652 1248999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeecc-CC---cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFT-RT---VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARP 346 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~-~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p 346 (561)
|++++.++++ .+|+||++++.... .+ .+. .+++... .. ++|. .+....+-. . ++....
T Consensus 117 ~~~~y~f~~~-~~Gt~wyH~h~~~~~~~~~~Gl~-G~~iV~~-~~-----~~p~--~d~e~~l~~-~--d~~~~~----- 178 (327)
T 1kbv_A 117 RTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMY-GLILVEP-KE-----GLPK--VDKEFYIVQ-G--DFYTKG----- 178 (327)
T ss_dssp EEEEEEEECC-SCEEEEEECCCSSHHHHHHTTCE-EEEEEEC-TT-----CCCC--CSEEEEEEE-E--EECBSS-----
T ss_pred CEEEEEEECC-CCeEEEEEeCCCChhhhhhcceE-EEEEEec-CC-----CCCC--CceEEEEEe-e--eeeccC-----
Confidence 9999999998 58999999874211 11 122 2333332 21 1221 110000000 0 010000
Q ss_pred CCCCCCCcCCcCcceEEEEccc-eeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccc
Q 046746 347 NPQGSFHYGGIPINRTIRLANT-AHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQP 425 (561)
Q Consensus 347 ~p~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 425 (561)
.. + ......+... .....+ ..+.|||+.+... ..
T Consensus 179 ~~-~--------~~g~~~~~~~~~~~~~~-~~~~iNG~~~~~~-----------------------------------~~ 213 (327)
T 1kbv_A 179 KK-G--------AQGLQPFDMDKAVAEQP-EYVVFNGHVGALT-----------------------------------GD 213 (327)
T ss_dssp CT-T--------CCEEECBCHHHHHHTCC-SEEEETTSTTTTS-----------------------------------GG
T ss_pred cc-c--------cccccccChhHhccCCC-ceEEEcCcccCCC-----------------------------------Cc
Confidence 00 0 0000000000 000111 2478888764210 01
Q ss_pred eEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 426 NVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
..+.++.|++++|+|.|.+ ...|+||||||.|+||+.+++.. .|.++||+.|.||+.+.|.|++++||
T Consensus 214 ~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG 282 (327)
T 1kbv_A 214 NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPG 282 (327)
T ss_dssp GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCE
T ss_pred eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCe
Confidence 2356788999999999987 57899999999999999975421 25789999999999999999999999
Q ss_pred eeeeecccchhh-hccceEEEEEecCC
Q 046746 505 MWNLRSNIWERN-YLGQQLYLSVRLHK 530 (561)
Q Consensus 505 ~w~~HCHil~H~-d~GMm~~~~V~~~~ 530 (561)
.|+||||+..|. ..||++.+.|....
T Consensus 283 ~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 283 NYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEEEeccccccccCCcEEEEEECCCC
Confidence 999999999995 88999999997554
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=9.8e-21 Score=194.10 Aligned_cols=257 Identities=14% Similarity=0.135 Sum_probs=154.9
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCC-CceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGV-KTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|+|++++|+++++|+.|... ...+.++++++.. +.||..+. .|.||
T Consensus 60 ~~~~~ng~~p------------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~~-------~i~PG 117 (340)
T 2bw4_A 60 HAMTFNGSVP------------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGALT-------QVNPG 117 (340)
T ss_dssp EEEEETTBSS------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTT
T ss_pred EEEEECCCCC------------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccce-------EeCCC
Confidence 5799999963 399999999999999999973 2455677776542 23443321 39999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeecc-----CCcceeEEEEEecCCCCCCCCCCCCCCCCccccccc-cccccccccccCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFT-----RTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQ-FRSFRWNLTASAA 344 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~-~~~~~~~l~~~~~ 344 (561)
|++++.++++ .+|+||.+++.... .....+ +++.+....... ..+. |..++..... ..+ +.+.
T Consensus 118 ~~~~y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G-~~iV~~~~~~~~--~~~~-p~~~d~e~~l~l~D--~~~~---- 186 (340)
T 2bw4_A 118 EETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNG-AIMVLPRDGLKD--EKGQ-PLTYDKIYYVGEQD--FYVP---- 186 (340)
T ss_dssp EEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEE-EEEEECTBCEEC--TTSC-EECCSEEEEEEEEE--ECCC----
T ss_pred CEEEEEEECC-CCeEEEEEcCCCCchhhHHhCcCEE-EEEEccCcCccc--ccCC-CcCcceeEEEeeee--eeec----
Confidence 9999999998 59999999985311 112222 233332211100 0110 1111100000 000 0000
Q ss_pred CCCCCCCCC-cCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccc
Q 046746 345 RPNPQGSFH-YGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTL 423 (561)
Q Consensus 345 ~p~p~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 423 (561)
..+.+.+. +... . ....-............|.|||+.|...
T Consensus 187 -~~~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~iNG~~~~~~----------------------------------- 228 (340)
T 2bw4_A 187 -KDEAGNYKKYETP-G-EAYEDAVKAMRTLTPTHIVFNGAVGALT----------------------------------- 228 (340)
T ss_dssp -BCTTSCBCCCCSH-H-HHHHHHHHHHHTTCCSEEEETTSTTTTS-----------------------------------
T ss_pred -cccCCcccccccc-c-ccccchhhHhhcCCCCEEEECCccCCcc-----------------------------------
Confidence 00000000 0000 0 0000000000001112478998875311
Q ss_pred cceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCC-ceeEEEeCCCcEEEEEEEeCC
Q 046746 424 QPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV-SRYTIQVFPNCWAAILVSMDN 502 (561)
Q Consensus 424 ~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~-~rDTv~vp~~g~~~irf~adn 502 (561)
....+.++.|++++|++.|.+...|++|+|||.|+|+.. |.+. ..|. ++||+.|.+|+.+.|.|.+++
T Consensus 229 ~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~d--G~~~---------~~p~~~~dtv~l~pGer~~v~v~~~~ 297 (340)
T 2bw4_A 229 GDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWAT--GKFR---------NPPDLDQETWLIPGGTAGAAFYTFRQ 297 (340)
T ss_dssp GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEETT--CCTT---------SCCEEEESCCCBCTTEEEEEEEECCS
T ss_pred CCCceEcCCCCEEEEEECCCCCccceEEecCcceEEeCC--Cccc---------CCccccceEEEeCCCceEEEEEECCC
Confidence 012356788999998888877788999999999999863 3221 1122 479999999999999999999
Q ss_pred cceeeeecccc-hhhhccceEEEEEecCC
Q 046746 503 AGMWNLRSNIW-ERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 503 pG~w~~HCHil-~H~d~GMm~~~~V~~~~ 530 (561)
||.|+||||++ +|++.|||+.++|...+
T Consensus 298 pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 298 PGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp CEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 99999999999 59999999999997654
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.6e-22 Score=219.82 Aligned_cols=244 Identities=13% Similarity=0.114 Sum_probs=151.0
Q ss_pred CceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCC---------CCC
Q 046746 214 EPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQ---------DPK 284 (561)
Q Consensus 214 ~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~---------~~g 284 (561)
.|+|+++.|++++++|.|... ..+.+|.||..+.....||.+- + ...|.||++++..+++.+ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-~----~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-R----KNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-T----SSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-c----cCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 499999999999999999986 4568888887765544468752 1 246899999999998875 568
Q ss_pred ceEEEEEeeccCC-cceeEEEEEecCCCCCCCCCCCCCCCCccccccc--cc-cccccccccC--CCCCCCCCCCcCCcC
Q 046746 285 DYYLIASTRFTRT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQ--FR-SFRWNLTASA--ARPNPQGSFHYGGIP 358 (561)
Q Consensus 285 ~y~i~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~--~~-~~~~~l~~~~--~~p~p~~~~~~~~~~ 358 (561)
.||.+++.....+ .....+.|.+...........+. ..+.+..+.. .. ...+-+.... ..+.|.. +..
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~-~~~---- 345 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQ-VTVQEFALFFTIFDETKSWYFTENMERNCRAPCN-IQM---- 345 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCC-CSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-CCS----
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccCCC-ccceEEEEEEeecCccccchhccchhhcccCccc-ccc----
Confidence 9999887543111 11222333333222110000000 0010000000 00 0000000000 0000000 000
Q ss_pred cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEE
Q 046746 359 INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEI 438 (561)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~ 438 (561)
.+.. |. .....|.|||..|.. ...+.++.|++++|
T Consensus 346 ~d~~--~~------~~~~~~~ING~~~~~-------------------------------------~~~l~v~~Ge~vr~ 380 (770)
T 2r7e_B 346 EDPT--FK------ENYRFHAINGYIMDT-------------------------------------LPGLVMAQDQRIRW 380 (770)
T ss_dssp SSSS--ST------TTSCEECTTSCTTTT-------------------------------------CCCCCCCSSSCEEE
T ss_pred CCcc--cc------ccCCccccCCccCCC-------------------------------------CCCeEEeCCCEEEE
Confidence 0000 00 111236677765421 11245688999999
Q ss_pred EEEcCCC--CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhh
Q 046746 439 VLENRQN--TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERN 516 (561)
Q Consensus 439 vl~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~ 516 (561)
+|.|.+. ..||||||||.|+|++.+ | .++||+.|+|++++.|+|++|+||.|+||||+++|+
T Consensus 381 rliN~g~~~~~H~fHlhGh~f~Vv~~d-g---------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~ 444 (770)
T 2r7e_B 381 YLLSMGSNENIHSIHFSGHVFTVRKKE-E---------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHL 444 (770)
T ss_dssp ECCCCCSSSCCCEEEBSSCCEECCSSS-C---------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHH
T ss_pred EEEeCCCCcceEEEEEcCCEEEEEecC-C---------------ceeeEEEECCCeEEEEEEEeCCCCceEEEecccccc
Confidence 9999874 489999999999998764 1 279999999999999999999999999999999999
Q ss_pred hccceEEEEEecCC
Q 046746 517 YLGQQLYLSVRLHK 530 (561)
Q Consensus 517 d~GMm~~~~V~~~~ 530 (561)
+.|||..|.|...+
T Consensus 445 ~~GM~~~~~V~s~~ 458 (770)
T 2r7e_B 445 HAGMSTLFLVYSNK 458 (770)
T ss_dssp TTBCCCCCCBCCSS
T ss_pred cccccccccccccc
Confidence 99999999985443
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=183.11 Aligned_cols=258 Identities=11% Similarity=0.059 Sum_probs=148.3
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|.|++++|+++++|+.|.+.. ..+.++++++. ..||.. +. . .|.||
T Consensus 53 ~~~~~ng~~p------------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~PG 110 (333)
T 1mzy_A 53 QAMTFDGSIP------------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LINPG 110 (333)
T ss_dssp EEEEETTBSS------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBCTT
T ss_pred EEEEECCccC------------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeCCC
Confidence 5789999974 3999999999999999999642 12344444321 123221 11 1 38999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeec------cCCcceeEEEEEecCCCCCCCCCCCCCCCCcccccc-ccccccccccccC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRF------TRTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLN-QFRSFRWNLTASA 343 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~-~~~~~~~~l~~~~ 343 (561)
+++++.++++ .+|.||.+++... ......+.-+++ .....+ .+.+. |..++..+. ...+ +.+..
T Consensus 111 ~~~~y~f~~~-~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~-~~~~~~--~~~~~-p~~~d~e~~l~l~D--~~~~~-- 181 (333)
T 1mzy_A 111 EKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVL-PRDGLK--DHEGK-PVRYDTVYYIGESD--HYIPK-- 181 (333)
T ss_dssp EEEEEEEECC-SCEEEEEECCCSTTHHHHHHHTTCEEEEEEE-CTTCCB--CTTSC-BCCCSEEEEEEEEE--ECCCB--
T ss_pred CEEEEEEECC-CCEEEEEeecCCcccchhhhhCCCEEEEEEc-cCcCcc--ccccC-CCccchheeeeeee--eccCc--
Confidence 9999999997 6999999998531 111223332332 211110 01100 111110000 0000 00000
Q ss_pred CCCCCCCCCC-cCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCccccccc
Q 046746 344 ARPNPQGSFH-YGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVT 422 (561)
Q Consensus 344 ~~p~p~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 422 (561)
...+.+. +... . ..+.-............|.|||+.+..+
T Consensus 182 ---~~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ING~~~~~~---------------------------------- 222 (333)
T 1mzy_A 182 ---DEDGTYMRFSDP-S-EGYEDMVAVMDTLIPSHIVFNGAVGALT---------------------------------- 222 (333)
T ss_dssp ---CTTSCBCCCSSH-H-HHHHHHHHHHTTTCCSEEEETTSTTTTS----------------------------------
T ss_pred ---cccccccccccc-c-ccccchhHHhhccCCcEEEECCcccccC----------------------------------
Confidence 0000000 0000 0 0000000000001113478898764211
Q ss_pred ccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCC-ceeEEEeCCCcEEEEEEEeC
Q 046746 423 LQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAV-SRYTIQVFPNCWAAILVSMD 501 (561)
Q Consensus 423 ~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~-~rDTv~vp~~g~~~irf~ad 501 (561)
+...+.++.|++++|++.|.+...|++++|+|.|+|++ + |.+.+ .|. ++||+.|.||+.+.+.|.++
T Consensus 223 -~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~~---------~p~~~~dtv~l~pGer~~v~v~a~ 290 (333)
T 1mzy_A 223 -GEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFHN---------APERDLETWFIRGGTAGAALYKFL 290 (333)
T ss_dssp -GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTTS---------CCEEEESBCCBCTTEEEEEEEECC
T ss_pred -CCcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe-C-CcccC---------CCccCcceEEECCCceEEEEEEcC
Confidence 01225678899988877776555556667888899987 3 43211 122 58999999999999999999
Q ss_pred Ccceeeeecccchhh-hccceEEEEEecCCc
Q 046746 502 NAGMWNLRSNIWERN-YLGQQLYLSVRLHKR 531 (561)
Q Consensus 502 npG~w~~HCHil~H~-d~GMm~~~~V~~~~~ 531 (561)
+||.|+||||++.|+ +.|||..++|....+
T Consensus 291 ~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 291 QPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp SCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred CCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 999999999999997 999999999986543
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=183.44 Aligned_cols=247 Identities=15% Similarity=0.089 Sum_probs=162.2
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|.|+++.|++++||+.|.... ..+.+|+||+. ..||... +..|.||
T Consensus 49 ~~~~~ng~~p------------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg 106 (442)
T 2zoo_A 49 VFWSFGETVP------------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPG 106 (442)
T ss_dssp EEEEETTBSS------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTT
T ss_pred EEEEECCcCC------------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCC
Confidence 5799999973 3999999999999999999653 56789999975 3687642 2358999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeec-cCC-cceeEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRF-TRT-VITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQFRSFRWNLTASAARPNP 348 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~-~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~~~~~~p~p 348 (561)
+++++.++++ .+|.||++++... ..+ .....+.+.+.... ++|. .+.+..+.. .+ +.+...
T Consensus 107 ~~~~y~f~~~-~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~--~d~e~~l~l-~d--~~~~~~------ 169 (442)
T 2zoo_A 107 HTSTFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP--VDREYYLVQ-GD--FYTKGE------ 169 (442)
T ss_dssp CEEEEEEECC-SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC--CSEEEEEEE-EE--ECBSSC------
T ss_pred CEEEEEEEcC-CCeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC--CCceEEEEe-ee--eeccCc------
Confidence 9999999997 6999999995321 111 11223444443321 1221 111100000 00 100000
Q ss_pred CCCCCcCCcCcceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEE
Q 046746 349 QGSFHYGGIPINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVM 428 (561)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 428 (561)
.+. . ....+............+.|||+.+... ....+
T Consensus 170 ~~~-------~-~~~~~~~~~~~~~~~~~~liNG~~~~~~-----------------------------------~~~~l 206 (442)
T 2zoo_A 170 FGE-------A-GLQPFDMAKAIDEDADYVVFNGSVGSTT-----------------------------------DENSL 206 (442)
T ss_dssp TTC-------C-EEECBCHHHHHTTCCSEEEETTSTTTTS-----------------------------------GGGCE
T ss_pred ccc-------c-ccccCChhHhccCCCCEEEECCCcCCCC-----------------------------------CCCce
Confidence 000 0 0000000000001112467888764210 01135
Q ss_pred ecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceee
Q 046746 429 DATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507 (561)
Q Consensus 429 ~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~ 507 (561)
.++.|++++|+|.|.+ ...|+||+||+.|+|++.+++.. .|.+.|++.|.||+.+.+.|.+++||.|+
T Consensus 207 ~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~ 275 (442)
T 2zoo_A 207 TAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFI 275 (442)
T ss_dssp EEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEE
T ss_pred EeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEE
Confidence 6788999999999976 57899999999999999864321 25688999999999999999999999999
Q ss_pred eecccchh-hhccceEEEEEecCCc
Q 046746 508 LRSNIWER-NYLGQQLYLSVRLHKR 531 (561)
Q Consensus 508 ~HCHil~H-~d~GMm~~~~V~~~~~ 531 (561)
+|||.+.| .+.||+..+.|...+.
T Consensus 276 ~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 276 LVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEecccccccccCceEEEEecCCCC
Confidence 99999999 5999999999976654
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-17 Score=167.62 Aligned_cols=257 Identities=13% Similarity=0.158 Sum_probs=152.4
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC-ceEEEEEeCcccEEEeecCcccceeeeeeEEEccc
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK-TSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVG 270 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pg 270 (561)
..+++||+.. .|+|++++|+++++|+.|.... ..+.++++++.. +.||..+. .|.||
T Consensus 54 ~~~~~ng~~p------------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG 111 (336)
T 1oe1_A 54 QAMTFNGSMP------------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPG 111 (336)
T ss_dssp EEEEETTBSS------------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTT
T ss_pred EEEEECCccC------------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCC
Confidence 5799999863 3999999999999999998752 456788888753 22333221 38999
Q ss_pred ceEEEEEEeCCCCCceEEEEEeecc-----CCcceeEEEEEecCCCCCCCCCCCCCCCCccccccc-cccccccccccCC
Q 046746 271 QCFTVLVTANQDPKDYYLIASTRFT-----RTVITTTAIVRYSDSKGLASPDLPKAPVGWDWSLNQ-FRSFRWNLTASAA 344 (561)
Q Consensus 271 eR~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~-~~~~~~~l~~~~~ 344 (561)
++++..++++ .+|+||.+++.... ...+.+.-+++-. ...+ .+.+. |..++..+.. ..+ +.+..
T Consensus 112 ~~~~y~f~~~-~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~-~~~~--~~~~~-~~~~D~e~~l~~~D--~~~~~--- 181 (336)
T 1oe1_A 112 EQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPR-DGLK--DPQGK-PLHYDRAYTIGEFD--LYIPK--- 181 (336)
T ss_dssp EEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECT-TCCB--CTTSC-BCCCSEEEEEEEEE--ECCCB---
T ss_pred CEEEEEEECC-CCeEEEEecCCCCchhHHHhCCCeEEEEEecC-cCCc--ccccC-cccCCceeEeeeee--eeecc---
Confidence 9999999998 59999999985311 1122232233321 1110 11111 1111100000 000 00000
Q ss_pred CCCCCCCCC-cCCcC-cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCccccccc
Q 046746 345 RPNPQGSFH-YGGIP-INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVT 422 (561)
Q Consensus 345 ~p~p~~~~~-~~~~~-~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 422 (561)
...+.+. +.... .... .+.. .....+ ..+.|||+.+...
T Consensus 182 --~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~-~~~liNG~~~~~~---------------------------------- 222 (336)
T 1oe1_A 182 --GPDGKYKDYATLAESYGD-TVQV-MRTLTP-SHIVFNGKVGALT---------------------------------- 222 (336)
T ss_dssp --CTTSSBCCCSSTGGGHHH-HHHH-HHTTCC-SEEEETTSTTTTS----------------------------------
T ss_pred --ccCCceeecccccccccc-hhhH-hhcCCC-CEEEECCeeccCC----------------------------------
Confidence 0000000 00000 0000 0000 000011 2467888654211
Q ss_pred ccceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCC-CceeEEEeCCCcEEEEEEEeC
Q 046746 423 LQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDA-VSRYTIQVFPNCWAAILVSMD 501 (561)
Q Consensus 423 ~~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P-~~rDTv~vp~~g~~~irf~ad 501 (561)
+...+.++.|++++|+..+.+...+++++|||.|.|+. .|.+. ..| .+.||+.|++|+.+.+.+.++
T Consensus 223 -~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~~---------~p~~~~~dtv~i~pGer~dvlv~~~ 290 (336)
T 1oe1_A 223 -GANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKFA---------NPPQRDLETWFIRGGSAGAALYTFK 290 (336)
T ss_dssp -GGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEECC
T ss_pred -CCcceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcCc---------CCccccceEEEECCCCcEEEEEEcC
Confidence 11235678899988866666556677777999999986 34321 112 246999999999999999999
Q ss_pred Ccceeeeecccchhh-hccceEEEEEecCCc
Q 046746 502 NAGMWNLRSNIWERN-YLGQQLYLSVRLHKR 531 (561)
Q Consensus 502 npG~w~~HCHil~H~-d~GMm~~~~V~~~~~ 531 (561)
+||.|+||||.+.|. +.||+..++|....+
T Consensus 291 ~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 291 QPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 999999999999886 999999999976543
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.65 E-value=7.3e-15 Score=155.68 Aligned_cols=236 Identities=14% Similarity=0.141 Sum_probs=153.1
Q ss_pred eEEEEEEEEEEEecCCC-----------eeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeee-CCccCCCCC
Q 046746 28 TFFFTWNVTYGTISPLG-----------IPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTW-PGIQHKKNS 94 (561)
Q Consensus 28 ~~~~~l~~~~~~~~~dG-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~~ 94 (561)
.+++.|.+++.....+| .....+++||+. .|+|+|++| ++++||.|... ....+|+ ||..+.. .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 46777888776554433 345689999995 799999999 99999999984 5688999 8875543 4
Q ss_pred CCCCCCc----c--CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCce-----------eEEE-EecCCCCCCCCC
Q 046746 95 WQDGVLG----T--NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGF-----------GGLC-IHSRSVVPVPYN 156 (561)
Q Consensus 95 ~~DGv~~----~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----------G~li-V~~~~~~~~~~~ 156 (561)
+.||.+. . +..|.|||++++.++++ +.|+||++++........+. .+++ +.........
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 6899743 1 67799999999999974 68999999986533221111 1111 1111000000
Q ss_pred CCCCCceEEEecceeecch-HHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCC
Q 046746 157 RFVEDDFTLLIGDWYTRSH-VELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVK 235 (561)
Q Consensus 157 ~~~~~e~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~ 235 (561)
..+.+..|..+..... ......+... ..++|||+.+. .+.+.+.++.|++++|+|+|.
T Consensus 306 ---~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~---------~~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 ---TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWD---------VNRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp -----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCC---------TTCCCEEEETTCEEEEEEEEE---
T ss_pred ---cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCC---------CCCCcEEcCCCCEEEEEEECC---
Confidence 0000000000000000 0000000000 04679999862 123578999999999999997
Q ss_pred ceEEEEEeCcccEEEeecCccc---ceeeeeeEEEcccceEEEEEEeCCCCCc----eEEEEEee
Q 046746 236 TSLNFRIQGHTMKLVEMEGSHV---VQNEYESLDVHVGQCFTVLVTANQDPKD----YYLIASTR 293 (561)
Q Consensus 236 ~~~~~~i~gh~~~via~DG~~~---~p~~~~~v~l~pgeR~dv~v~~~~~~g~----y~i~~~~~ 293 (561)
..+.||||||.|+|++.||.+. +|...|++.+ |+++.|.++++ ++|. |.++|+..
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil 426 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCch
Confidence 4789999999999999999875 4678999999 99999999998 5665 99999854
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.62 E-value=6.1e-15 Score=156.02 Aligned_cols=241 Identities=13% Similarity=0.130 Sum_probs=162.1
Q ss_pred eEEEEEEEEEEEecC------------CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCC
Q 046746 28 TFFFTWNVTYGTISP------------LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNS 94 (561)
Q Consensus 28 ~~~~~l~~~~~~~~~------------dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~ 94 (561)
.+++.|.+++-.... .|.....+++||+. .|.|+|++| ++++||.|... ....+|++|..+.. .
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 467777776643321 13445689999996 799999999 99999999984 46899999976543 4
Q ss_pred CCCCCCcc------CCccCCCCeEEEEEEecCceeeeeEecCchhh--hc-cCc--------------eeEEEEecCC-C
Q 046746 95 WQDGVLGT------NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFH--RA-AGG--------------FGGLCIHSRS-V 150 (561)
Q Consensus 95 ~~DGv~~~------q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~liV~~~~-~ 150 (561)
+.||.+.. ...|.|||+++..+++ +++|.||++|+.... .. .|| ....+++-.. .
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 68997641 4569999999999996 459999999974311 10 122 1222232211 1
Q ss_pred CCCCCCCCCCCceEEEecceeecc-hHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEE
Q 046746 151 VPVPYNRFVEDDFTLLIGDWYTRS-HVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRI 229 (561)
Q Consensus 151 ~~~~~~~~~~~e~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRl 229 (561)
.+.+.+. . . .-+.+..... ...+. +..+. ....+.|||+.+. ...+.+.++.|++++|+|
T Consensus 302 ~~~~~p~---~-l-~~~~~l~~~~~~r~~~--l~~~~---~g~~~~iNg~~~~---------~~~~~~~~~~g~~~~~~~ 362 (439)
T 2xu9_A 302 KPLPLPK---A-L-SPFPTLPAPVVTRRLV--LTEDM---MAARFFINGQVFD---------HRRVDLKGQAQTVEVWEV 362 (439)
T ss_dssp CCCCCCS---C-C-CCCCCCCCCSEEEEEE--EEEEG---GGTEEEETTBCCC---------TTCCCEEECTTCEEEEEE
T ss_pred ccccCcc---c-C-CCcccCCCCCcceEEE--EEeec---cCceEeECCEECC---------CCCCceecCCCCEEEEEE
Confidence 1111100 0 0 0000000000 00000 00000 1136899999871 122458999999999999
Q ss_pred EEcCCCceEEEEEeCcccEEEeecCccc-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 230 CNVGVKTSLNFRIQGHTMKLVEMEGSHV-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 230 iN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
.|.+. ..|.||||||.|+|++.+|... .|...|++.+.||+++.|.++++ .||.|.++++..
T Consensus 363 ~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 363 ENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp EECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred EcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcc
Confidence 99876 5679999999999999999875 47889999999999999999977 899999999854
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-16 Score=133.29 Aligned_cols=90 Identities=21% Similarity=0.290 Sum_probs=71.0
Q ss_pred CcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCC--CCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCc
Q 046746 54 GQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKN--SWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPST 131 (561)
Q Consensus 54 g~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (561)
-+|++|+|++++||+|+ ++|..+..+++||||..+... ..+||.+..++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 36789999999999975 679988999999999865321 0123222225789999999999985468999999999
Q ss_pred hhhhccCceeEEEEec
Q 046746 132 GFHRAAGGFGGLCIHS 147 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~~ 147 (561)
.+..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 456789999999974
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.5e-14 Score=150.54 Aligned_cols=259 Identities=13% Similarity=0.131 Sum_probs=163.6
Q ss_pred EEEEEEEEEEecCCCe-----eeeEEEECCcCC--------CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCC
Q 046746 30 FFTWNVTYGTISPLGI-----PQQGILINGQFP--------GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSW 95 (561)
Q Consensus 30 ~~~l~~~~~~~~~dG~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~ 95 (561)
++.|.+++-....++. ....+++||+.. .|+|+|++|+++++||.|... ....+|++|..+.. .+
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 5566666554433332 245789999853 289999999999999999984 56789998876543 46
Q ss_pred CCCCCcc-----CCccCCCCeEEEEEEecCceeeeeEecCchh--h-----hccCceeEEEEecCCCCCCCCCCCCCCce
Q 046746 96 QDGVLGT-----NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGF--H-----RAAGGFGGLCIHSRSVVPVPYNRFVEDDF 163 (561)
Q Consensus 96 ~DGv~~~-----q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q-----~~~Gl~G~liV~~~~~~~~~~~~~~~~e~ 163 (561)
.||.+.. ...|.|||+++..+++++.+|.||.+++... + ...|+..+++.........+... ...+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~-~~~~~ 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTS-ANPNP 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCC-CCSSC
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCC-CCCcc
Confidence 8997531 4568999999999997555799999987531 1 22344344444332111111000 00000
Q ss_pred EEEecceeecch--HHh---------hhhhcCCCCCCCCCeEEEcCccCCCCCCC------CCC------CCCCceEEEE
Q 046746 164 TLLIGDWYTRSH--VEL---------GKQLDSGKLLGKPDGVLINGKSGRLDYDS------DGK------GDNEPLFTMK 220 (561)
Q Consensus 164 ~l~~~d~~~~~~--~~~---------~~~~~~~~~~~~~~~~liNG~~~~~~~~~------~~~------~~~~p~~~v~ 220 (561)
..+.+..+... ... ...+...... ....+.|||+.+...... ++. ......++++
T Consensus 301 -~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~ 378 (503)
T 1hfu_A 301 -AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGF-SGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELP 378 (503)
T ss_dssp -CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEE-ETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEEC
T ss_pred -CCCccccccccCccCCCCcccCCcceEEEEEEeec-cCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEcc
Confidence 00011100000 000 0000000000 012689999986210000 000 0113578999
Q ss_pred cCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcc----cceeeeeeEEE-cccceEEEEEEeCCCCCceEEEEEee
Q 046746 221 AGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSH----VVQNEYESLDV-HVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 221 ~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~----~~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
.|++++++++|......|.||||||.|+|++.+|.. ..|...|++.+ .||+++.|.++++ +||.|.++++..
T Consensus 379 ~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 379 RNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp SSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 999999999965445678999999999999999875 25789999999 8999999999998 899999999854
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-13 Score=148.64 Aligned_cols=238 Identities=15% Similarity=0.187 Sum_probs=154.3
Q ss_pred eeEEEECCcCC---------CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCe
Q 046746 47 QQGILINGQFP---------GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKN 111 (561)
Q Consensus 47 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~ 111 (561)
...+++||+.. -|+|+|++|+++++||.|... ....+|++|..+.. .+.||.+.. ...|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 35789999853 189999999999999999984 56789999976543 468997531 456999999
Q ss_pred EEEEEEecCceeeeeEecCchh---hhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecch--H---------H
Q 046746 112 YTYYLQVKDQIGSYIYHPSTGF---HRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSH--V---------E 177 (561)
Q Consensus 112 ~~Y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~--~---------~ 177 (561)
++..+++++.+|.||.+++... ....|+..+++.........+... ..+ ...+.+..+... . .
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~--~~~-~~~~~~~~l~p~~~~~~p~~~~~~~ 346 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTS--QNS-GTALNEANLIPLINPGAPGNPVPGG 346 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCC--CCC-SCBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCC--CCc-ccccchhhcccCCcccCCCcccCCc
Confidence 9999997555799999997541 122344344544432211111100 000 000000000000 0 0
Q ss_pred hhh--hhcCCCCCCCCCeEEEcCccCCCCCCC------CCC------CCCCceEEEEcCCEEEEEEEEcCCCceEEEEEe
Q 046746 178 LGK--QLDSGKLLGKPDGVLINGKSGRLDYDS------DGK------GDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQ 243 (561)
Q Consensus 178 ~~~--~~~~~~~~~~~~~~liNG~~~~~~~~~------~~~------~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~ 243 (561)
... .+..+.. .....+.|||+.+...... ++. ....+.++++.|++++|+++| ...|.||||
T Consensus 347 ~~~~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLH 422 (521)
T 1v10_A 347 ADINLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLH 422 (521)
T ss_dssp SSEEEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEES
T ss_pred ceEEEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEc
Confidence 000 0000000 0112688999986210000 000 012367899999999999999 356799999
Q ss_pred CcccEEEeecCcc----cceeeeeeEEE-cccceEEEEEEeCCCCCceEEEEEee
Q 046746 244 GHTMKLVEMEGSH----VVQNEYESLDV-HVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 244 gh~~~via~DG~~----~~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
||.|+|++.+|.. ..|...|++.+ .||+++.|.++++ +||.|.++++..
T Consensus 423 Gh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~ 476 (521)
T 1v10_A 423 GHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHID 476 (521)
T ss_dssp SCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCH
T ss_pred cceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChH
Confidence 9999999999875 35789999999 8999999999998 899999999854
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=4.1e-14 Score=140.21 Aligned_cols=99 Identities=19% Similarity=0.336 Sum_probs=84.1
Q ss_pred EEECCcC--CCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------c-c-CCccCCCCeEEEEEEe
Q 046746 50 ILINGQF--PGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------G-T-NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~-~-q~~i~PG~~~~Y~f~~ 118 (561)
|+|||+. ++|.|++++||+|+++|.|.....+++||||...... .||.. . . .+.|.||++++|.|+.
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6899998 8999999999999999999998899999999765432 34431 1 1 4669999999999996
Q ss_pred cC--ceeeeeEecCchhhhccCceeEEEEecCCC
Q 046746 119 KD--QIGSYIYHPSTGFHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 119 ~~--~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (561)
.. .+|+||||||...+...||.|.++|++++.
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 32 699999999999999999999999999754
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-12 Score=139.06 Aligned_cols=242 Identities=13% Similarity=0.116 Sum_probs=153.1
Q ss_pred eeEEEECCcC---------CCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCe
Q 046746 47 QQGILINGQF---------PGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKN 111 (561)
Q Consensus 47 ~~~~~~Ng~~---------pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~ 111 (561)
...+++||+- +-|.|+|++|+++++||.|.. .....+|++|..+.. .+.||.+.. ...|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4679999962 347999999999999999986 456789998876543 568997532 456999999
Q ss_pred EEEEEEecCceeeeeEecCch---hhhccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH-----------
Q 046746 112 YTYYLQVKDQIGSYIYHPSTG---FHRAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE----------- 177 (561)
Q Consensus 112 ~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~----------- 177 (561)
++..+++.+..|.||.++... .....|...+++.........+......... ..+.+..+..-..
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCCC
Confidence 999999755579999998643 1122233334444432211111100000000 0001110000000
Q ss_pred hhhhhcCCCCCCCCCeEEEcCccCCCCCCC-------CCC------CCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeC
Q 046746 178 LGKQLDSGKLLGKPDGVLINGKSGRLDYDS-------DGK------GDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQG 244 (561)
Q Consensus 178 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~-------~~~------~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~g 244 (561)
....+..... .....+.|||+.+.. ... ++. ......+.++.|++++|.|.|......|.||+||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~-~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTP-PTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCC-CSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCC-CCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 0000000000 012368899998621 000 010 0123578999999999999843444677999999
Q ss_pred cccEEEeecCccc----ceeeeeeEEEcc-cceEEEEEEeCCCCCceEEEEEee
Q 046746 245 HTMKLVEMEGSHV----VQNEYESLDVHV-GQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 245 h~~~via~DG~~~----~p~~~~~v~l~p-geR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
|.|+|++.+|... .|...|++.+.+ |+.+.+.++++ +||.|.++++..
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 9999999988653 588899999997 99999999998 899999999854
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.9e-12 Score=137.50 Aligned_cols=242 Identities=15% Similarity=0.106 Sum_probs=157.7
Q ss_pred EEEEEEEEEEEecCCCe-------------eeeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCC
Q 046746 29 FFFTWNVTYGTISPLGI-------------PQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNS 94 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~ 94 (561)
.+| |.++......+|. ....+++||+. .|+|.|++|+ ++|+.|.. .....+|++|..... .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 455 7776665544443 34679999996 6899999999 99999997 567899999976543 5
Q ss_pred CCCCCCc----c--CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCce--------eEEEEecC-CCCCCCC----
Q 046746 95 WQDGVLG----T--NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGF--------GGLCIHSR-SVVPVPY---- 155 (561)
Q Consensus 95 ~~DGv~~----~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~--------G~liV~~~-~~~~~~~---- 155 (561)
+.||... . ...|.|||+++..++. .+.|+|..-++.... .|+. -.+-++.. ...+.|.
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 7897432 1 5669999999999996 457777766653211 1111 11112111 1111111
Q ss_pred -CCC--CCCceEEEecceeecchHHhhhhhcCCCCC---CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEE
Q 046746 156 -NRF--VEDDFTLLIGDWYTRSHVELGKQLDSGKLL---GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRI 229 (561)
Q Consensus 156 -~~~--~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRl 229 (561)
+.. .+.+..+.++.... .+..+...+... .....++|||+.+. .+.+.++++.|++++|+|
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~iNG~~~~---------~~~~~~~~~~G~~v~w~l 399 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHM----QMHGMMGKSEGELKIALASMFLINRKSYD---------LKRIDLSSKLGVVEDWIV 399 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCS----TTTTGGGCCHHHHHHHHHTTEEETTBCCC---------TTCCCEEEETTCCEEEEE
T ss_pred CCCCCCCCcEEEEEEeccch----hcccccccccccccccccceeEECCEeCC---------CCCceEEeCCCCEEEEEE
Confidence 000 11222222221100 000000000000 00124999999871 134789999999999999
Q ss_pred EEcCCCceEEEEEeCcccEEEee--cCcccc---eeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 230 CNVGVKTSLNFRIQGHTMKLVEM--EGSHVV---QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 230 iN~~~~~~~~~~i~gh~~~via~--DG~~~~---p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
+|.+. ..|.||||||.|+|++. +|.... +...|++.+.||+++.|.++++ .+|.|.++++..
T Consensus 400 ~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 400 INKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp EECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSH
T ss_pred EcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCCh
Confidence 99765 56799999999999999 998763 5689999999999999999997 899999999754
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.43 E-value=5.5e-13 Score=119.68 Aligned_cols=98 Identities=18% Similarity=0.229 Sum_probs=72.7
Q ss_pred CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCC------CCcc--CCccCCCC--eEE
Q 046746 44 GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDG------VLGT--NCPIPPGK--NYT 113 (561)
Q Consensus 44 G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG------v~~~--q~~i~PG~--~~~ 113 (561)
|...+-+.++|. ++|+|+|++||+|+|+++|... ...|.+.+.+.++++.+. .... ...|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444444555666 5799999999999999999732 346777666544443221 1110 12689999 999
Q ss_pred EEEEecCceeeeeEecCchhhhccCceeEEEEe
Q 046746 114 YYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 114 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99994 89999999999889999999999985
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=99.42 E-value=8.9e-13 Score=112.10 Aligned_cols=105 Identities=15% Similarity=0.061 Sum_probs=79.2
Q ss_pred EEEEEEEEEEEe-----cCCCeeeeE-EEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 29 FFFTWNVTYGTI-----SPLGIPQQG-ILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 29 ~~~~l~~~~~~~-----~~dG~~~~~-~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
++|.+.+.+... ..+|..... ..||++|++|.|++++||+|+++++|.... +||+.... .| +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~---~ 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FG---V 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GT---E
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CC---c
Confidence 456666665443 234666555 589999999999999999999999999765 55654321 12 2
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEec
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+..+.||++++|.|+ ++++|+||||||.+..... |.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~-~~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFT-ADKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEE-CCSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eeEeCCCCEEEEEEE-CCCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 467999999999999 4789999999998754333 999999974
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-12 Score=135.34 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=151.3
Q ss_pred eeEEEECCcC--------CCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeE
Q 046746 47 QQGILINGQF--------PGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNY 112 (561)
Q Consensus 47 ~~~~~~Ng~~--------pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~ 112 (561)
...+++||+- +-|.|+|++|+++++||.|.. .....+|++|..+.. .+.||.+.. ...|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4678999973 347999999999999999987 456789999976543 568997532 4569999999
Q ss_pred EEEEEecCceeeeeEecCch--hh-hccCceeEEEEecCCCCCCCCCCCCCCceEEEecceeecchHH-----------h
Q 046746 113 TYYLQVKDQIGSYIYHPSTG--FH-RAAGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTRSHVE-----------L 178 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~~--~q-~~~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-----------~ 178 (561)
+..+++++..|.||..+... .+ ...|..-+++..+......+... ..... ..+.+..+..-.. .
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~-~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTN-QTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCC-CCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCC-CCCCC-cccccccccccccccCCCcccCCCC
Confidence 99999755579999987643 11 11222223343332211111100 00000 0001110000000 0
Q ss_pred hhhhcCCCCCCCCCeEEEcCccCCCCCCC-------CCC------CCCCceEEEEcCCEEEEEEEEcC--CCceEEEEEe
Q 046746 179 GKQLDSGKLLGKPDGVLINGKSGRLDYDS-------DGK------GDNEPLFTMKAGKVYKYRICNVG--VKTSLNFRIQ 243 (561)
Q Consensus 179 ~~~~~~~~~~~~~~~~liNG~~~~~~~~~-------~~~------~~~~p~~~v~~G~~~rlRliN~~--~~~~~~~~i~ 243 (561)
...+..... .....+.|||+.+.. ... ++. ....+.+.++.|++++|.|.|.+ ....|.||+|
T Consensus 323 d~~~~l~~~-~~~~~w~iNg~s~~~-~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLH 400 (499)
T 3pxl_A 323 DKAINMAFN-FNGSNFFINGASFVP-PTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLH 400 (499)
T ss_dssp SEEEECCEE-ECSSCEEETTBCCCC-CSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEET
T ss_pred cEEEEEEEE-ecCcEEEEcCEecCC-CCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceec
Confidence 000000000 012368899988621 000 010 01235789999999999999422 3346799999
Q ss_pred CcccEEEeecCccc----ceeeeeeEEEcc---cceEEEEEEeCCCCCceEEEEEee
Q 046746 244 GHTMKLVEMEGSHV----VQNEYESLDVHV---GQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 244 gh~~~via~DG~~~----~p~~~~~v~l~p---geR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
||.|+|++.+|... .|...|++.+.+ |+.+.+.++++ +||.|.++++..
T Consensus 401 Gh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 401 GHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp TCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 99999999887643 588899999976 99999999998 899999999854
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.2e-12 Score=135.85 Aligned_cols=242 Identities=11% Similarity=0.152 Sum_probs=150.4
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeEEEEEEecC
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNYTYYLQVKD 120 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~~Y~f~~~~ 120 (561)
...+++||+. .|+|+|++|+++++||.|.. .....+|.+|..+.. .+.||.+.. ...|.|||+++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4578999996 69999999999999999998 456788888875543 468997542 456999999999999754
Q ss_pred c-eeeeeEecCchhhhc------cCceeEEEEecCCCCCCCCCCCCCCceEEEecceeec----------chHHhhhhhc
Q 046746 121 Q-IGSYIYHPSTGFHRA------AGGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWYTR----------SHVELGKQLD 183 (561)
Q Consensus 121 ~-~Gt~wYH~H~~~q~~------~Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~~~----------~~~~~~~~~~ 183 (561)
+ .|.||..+....... ....+..+++-....+.+-.. ...++...+.|..+. .+..+.-.+.
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~-~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~ 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQN-YVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCC-CCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCC-cccccccccccccceeCCCCCCCCCCCeEEEEEEE
Confidence 3 578999876542210 012222333221111111000 000000000000000 0000000000
Q ss_pred CCCCCCCCCeEEEcCccCCCCC--------C-----CCCC--CCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccE
Q 046746 184 SGKLLGKPDGVLINGKSGRLDY--------D-----SDGK--GDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMK 248 (561)
Q Consensus 184 ~~~~~~~~~~~liNG~~~~~~~--------~-----~~~~--~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 248 (561)
..........++|||+.+...- . .... ......+.++.|++++|.|.|.+. ..|.||||||.|+
T Consensus 324 ~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh~F~ 402 (534)
T 1zpu_A 324 MDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGHAFQ 402 (534)
T ss_dssp EEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTCCEE
T ss_pred eeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCCceE
Confidence 0000011236889999762100 0 0000 001356899999999999999875 5679999999999
Q ss_pred EEeecCc--------------------ccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 249 LVEMEGS--------------------HVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 249 via~DG~--------------------~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
|++.++. +..|...|++.+.||+.+.|.++++ +||.|.++++..
T Consensus 403 Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 403 TIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp EEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred EEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 9998753 1236789999999999999999998 899999999854
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-11 Score=134.52 Aligned_cols=229 Identities=14% Similarity=0.153 Sum_probs=140.1
Q ss_pred eEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeEEEEEEe-cCceeeeeEecCch
Q 046746 60 NINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNYTYYLQV-KDQIGSYIYHPSTG 132 (561)
Q Consensus 60 ~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~~Y~f~~-~~~~Gt~wYH~H~~ 132 (561)
+|+|++|+++++||.|... ....+|++|..+.. .+.||.+.. ...|.|||+++..+++ ++..|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 45789999876543 468997532 5569999999999997 34489999998864
Q ss_pred hhhccCceeEEEEe--cCCCCCCCCCCCCCCceEEEecceeecchHHhhhh-----------------hcCCC-CCCCCC
Q 046746 133 FHRAAGGFGGLCIH--SRSVVPVPYNRFVEDDFTLLIGDWYTRSHVELGKQ-----------------LDSGK-LLGKPD 192 (561)
Q Consensus 133 ~q~~~Gl~G~liV~--~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~-----------------~~~~~-~~~~~~ 192 (561)
........+..|++ .......+... ....+ ...|........+... +.... ......
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~--~p~~p-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 360 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP--PPQTP-AWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYV 360 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC--CCCCC-CTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETTEE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC--CCCCC-ccccccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCCeE
Confidence 21111222322332 21110000000 00000 0000000000000000 00000 000112
Q ss_pred eEEEcCccCCC----------------------------CCCCCC-CCC-----CCceEEEEcCCEEEEEEEEcCCC---
Q 046746 193 GVLINGKSGRL----------------------------DYDSDG-KGD-----NEPLFTMKAGKVYKYRICNVGVK--- 235 (561)
Q Consensus 193 ~~liNG~~~~~----------------------------~~~~~~-~~~-----~~p~~~v~~G~~~rlRliN~~~~--- 235 (561)
.+.|||+.+.. +|+... ..| ....+.++.|++++|.|.|.+..
T Consensus 361 ~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~ 440 (552)
T 1aoz_A 361 KWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKEN 440 (552)
T ss_dssp EEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTT
T ss_pred EEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccc
Confidence 57888886421 010000 000 02458899999999999998753
Q ss_pred --ceEEEEEeCcccEEEee-cCcc----------cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 236 --TSLNFRIQGHTMKLVEM-EGSH----------VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 236 --~~~~~~i~gh~~~via~-DG~~----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
..|.||||||.|+|++. +|.+ ..|...|++.+.+|+.+.|.++++ +||.|.++++..
T Consensus 441 ~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~HCHi~ 510 (552)
T 1aoz_A 441 LSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFHCHIE 510 (552)
T ss_dssp CCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEEESSH
T ss_pred cCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEEeeeh
Confidence 46899999999999998 4553 247789999999999999999998 899999999854
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-12 Score=131.51 Aligned_cols=104 Identities=19% Similarity=0.310 Sum_probs=84.5
Q ss_pred EEECCcC--CCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------cc--CCccCCCCeEEEEEEe
Q 046746 50 ILINGQF--PGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------GT--NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~~--q~~i~PG~~~~Y~f~~ 118 (561)
|+|||+. ..|.|++++||+|+++|.|.....+.+|+||...... .+|.. .. ...|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 4789999999999999999998999999999864322 23321 11 3569999999999996
Q ss_pred --cCceeeeeEecCchhhhccCceeEEEEecCCCCCCCC
Q 046746 119 --KDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVVPVPY 155 (561)
Q Consensus 119 --~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~ 155 (561)
++++|+|+||||...+...||.|.++|.+++.....|
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~P~y 314 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGY 314 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCCCCC
Confidence 3679999999999999999999999999876543333
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2.3e-11 Score=132.22 Aligned_cols=245 Identities=11% Similarity=0.110 Sum_probs=148.6
Q ss_pred eeEEEECCcCC--------CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeE
Q 046746 47 QQGILINGQFP--------GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNY 112 (561)
Q Consensus 47 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~ 112 (561)
...+++||+.. -|+|.|++|+++++||.|... ....+|++|..+.. .+.||.+.. ...|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999973 379999999999999999984 46789999976543 468998631 5569999999
Q ss_pred EEEEEecCceeeeeEecCc--hhhh--ccCce-eEEEEecCCCCCCCCCC-C--CC----CceEE-Eecceeecc-----
Q 046746 113 TYYLQVKDQIGSYIYHPST--GFHR--AAGGF-GGLCIHSRSVVPVPYNR-F--VE----DDFTL-LIGDWYTRS----- 174 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~--~~q~--~~Gl~-G~liV~~~~~~~~~~~~-~--~~----~e~~l-~~~d~~~~~----- 174 (561)
+..+++++..|.||..+.. .... ..... .+++.........|... . .+ .+..+ -+.......
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999975557999998765 2110 11111 22222221111111100 0 00 00000 000000000
Q ss_pred hHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCC-------CCCC---CCCceEEEEcCCEEEEEEEEcCC----CceEEE
Q 046746 175 HVELGKQLDSGKLLGKPDGVLINGKSGRLDYDS-------DGKG---DNEPLFTMKAGKVYKYRICNVGV----KTSLNF 240 (561)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~-------~~~~---~~~p~~~v~~G~~~rlRliN~~~----~~~~~~ 240 (561)
.....-.+...........+.|||+.+...... .+.. .....+.++.++.+++.++|... ...|.|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000000000011234789999986211110 0000 01135778777777777777644 567899
Q ss_pred EEeCcccEEEeecC---------cc------------cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 241 RIQGHTMKLVEMEG---------SH------------VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 241 ~i~gh~~~via~DG---------~~------------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
|||||.|+|++.++ .. ..|...|++.+.+|+++.|.++++ .||.|.++++..
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil 506 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIA 506 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecch
Confidence 99999999999986 22 146789999999999999999988 899999999864
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-11 Score=128.00 Aligned_cols=229 Identities=11% Similarity=0.103 Sum_probs=150.9
Q ss_pred EEEEEEEEEEEecC-------------CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeee--CC---cc
Q 046746 29 FFFTWNVTYGTISP-------------LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTW--PG---IQ 89 (561)
Q Consensus 29 ~~~~l~~~~~~~~~-------------dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~--HG---~~ 89 (561)
+++.|.+++..... .|.....+++||+. .|+|+|++| ++++|+.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56677776654332 12334689999996 699999999 99999999984 5678999 77 44
Q ss_pred CCCCCCCCCCCcc------CCccCCCCeEEEEEEecCceeeeeEecCchhhhccC-------------ceeEEE--EecC
Q 046746 90 HKKNSWQDGVLGT------NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAG-------------GFGGLC--IHSR 148 (561)
Q Consensus 90 ~~~~~~~DGv~~~------q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G-------------l~G~li--V~~~ 148 (561)
+.. .+.||.+.. ...|.|||+++..++.+ .|.||..++.......+ -...++ +...
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 332 468997431 45699999999999974 47899887643211000 111222 2121
Q ss_pred CCCCCCCCC--C------CCCceEEEecceeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEE-E
Q 046746 149 SVVPVPYNR--F------VEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFT-M 219 (561)
Q Consensus 149 ~~~~~~~~~--~------~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~-v 219 (561)
...+.+... . ...+..+.+ ..+ ...++|||+.+. .+.+.+. +
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l---------------~~~-----~~~~~iNg~~~~---------~~~p~~~~~ 343 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFAL---------------SLS-----GMQWTINGMFWN---------ASNPLFEHV 343 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEE---------------EEE-----TTEEEETTBCCC---------TTCTTCCCE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEE---------------eCC-----CceeeECCCcCC---------CCCCceecc
Confidence 111000000 0 000111111 000 125899999872 1235677 9
Q ss_pred EcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc------------ce---eeeeeEEEcccceEEEEEEeC---C
Q 046746 220 KAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV------------VQ---NEYESLDVHVGQCFTVLVTAN---Q 281 (561)
Q Consensus 220 ~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~------------~p---~~~~~v~l~pgeR~dv~v~~~---~ 281 (561)
+.|++++|+|.|.+....|.||||||.|+|++.+|... .| ...|++.+.||+++.|++++. .
T Consensus 344 ~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~a 423 (448)
T 3aw5_A 344 SVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKR 423 (448)
T ss_dssp EECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGT
T ss_pred CCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCC
Confidence 99999999999998446789999999999999999764 23 578999999999999997775 2
Q ss_pred -CCCceEEEEEee
Q 046746 282 -DPKDYYLIASTR 293 (561)
Q Consensus 282 -~~g~y~i~~~~~ 293 (561)
.| |.++++..
T Consensus 424 dnp--w~~HCHil 434 (448)
T 3aw5_A 424 GQL--FPFHCHNL 434 (448)
T ss_dssp TCE--EEEEESSH
T ss_pred CCc--EEEEcCCh
Confidence 45 88888754
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-11 Score=129.65 Aligned_cols=250 Identities=16% Similarity=0.161 Sum_probs=155.8
Q ss_pred EEEEEEEEEEEecCCC--------------eeeeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeee-CCccCCC
Q 046746 29 FFFTWNVTYGTISPLG--------------IPQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTW-PGIQHKK 92 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG--------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~-HG~~~~~ 92 (561)
.++.|.+++.....+| .....+++||+. .|.+.+ +|+++++||.|.. .....+++ +|..+..
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4667777766554443 233579999996 588876 6789999999997 45678888 6764332
Q ss_pred CCCCCCCCc----c--CCccCCCCeEEEEEEecCceeeeeEecCchhhhc------cCceeEEEEecC---CCCCCCC--
Q 046746 93 NSWQDGVLG----T--NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRA------AGGFGGLCIHSR---SVVPVPY-- 155 (561)
Q Consensus 93 ~~~~DGv~~----~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~------~Gl~G~liV~~~---~~~~~~~-- 155 (561)
.+.||.+. . ...|.|||+++..++++ +.+.|+.-+....... +.-.-.+-|.+. .....|.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 56899642 1 56699999999999974 5677776544221100 000002223221 1111110
Q ss_pred ---CCCC------CCceEEEecceeecc-----------hHHhhhh----hc----CCCC--------CCCCCeEEEcCc
Q 046746 156 ---NRFV------EDDFTLLIGDWYTRS-----------HVELGKQ----LD----SGKL--------LGKPDGVLINGK 199 (561)
Q Consensus 156 ---~~~~------~~e~~l~~~d~~~~~-----------~~~~~~~----~~----~~~~--------~~~~~~~liNG~ 199 (561)
+... .+++.+.+... .+. ...+... +. .|.. ......++|||+
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPM-LDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHH-HHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred ccCCCCcccccccceEEEEEeccc-ccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 0000 12233332210 000 0000000 00 0100 000124799999
Q ss_pred cCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccce---eeeeeEEEcccceEEEE
Q 046746 200 SGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ---NEYESLDVHVGQCFTVL 276 (561)
Q Consensus 200 ~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p---~~~~~v~l~pgeR~dv~ 276 (561)
.+. .+.+.++++.|++++|+|+|.+....|.||||||.|+|++.||....+ ...|+|.|. |+++.|+
T Consensus 386 ~~~---------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~ 455 (488)
T 3od3_A 386 AFD---------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVL 455 (488)
T ss_dssp CCC---------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEE
T ss_pred eCC---------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEE
Confidence 871 134779999999999999999976778999999999999999987643 478999999 9999999
Q ss_pred EEeCC---CCCceEEEEEee
Q 046746 277 VTANQ---DPKDYYLIASTR 293 (561)
Q Consensus 277 v~~~~---~~g~y~i~~~~~ 293 (561)
++++. .+|.|.++++..
T Consensus 456 ~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 456 VKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp ECBCSCCCGGGCEEEEESSH
T ss_pred EEeccCCCCCCCEEEeCCch
Confidence 99974 357899999754
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-11 Score=133.23 Aligned_cols=96 Identities=15% Similarity=0.056 Sum_probs=74.7
Q ss_pred CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCce
Q 046746 43 LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQI 122 (561)
Q Consensus 43 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~ 122 (561)
++....+|++|++|++|+|++++||+|+++++|.+...-. +||+.... .|+ ++.+.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 4577889999999999999999999999999998653111 35654422 222 3679999999999995 789
Q ss_pred eeeeEecCch-hhhccCceeEEEEecC
Q 046746 123 GSYIYHPSTG-FHRAAGGFGGLCIHSR 148 (561)
Q Consensus 123 Gt~wYH~H~~-~q~~~Gl~G~liV~~~ 148 (561)
|+||||||.. .....||+|.|+|+++
T Consensus 567 GtY~yhC~e~Cg~~H~gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHMEMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEEECCCCCCCCccCCEEEEEEEcC
Confidence 9999999931 1112399999999985
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.9e-11 Score=127.80 Aligned_cols=227 Identities=14% Similarity=0.125 Sum_probs=139.8
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCc-cCCCCCCCCCCCc----c--CCccCCCCeEEEEEEe
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGI-QHKKNSWQDGVLG----T--NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~-~~~~~~~~DGv~~----~--q~~i~PG~~~~Y~f~~ 118 (561)
...+++||+. .|.|.|+.| ++++||.|... ....+|+.|. .+. -.+.||.+. . ...|.|||+++..++.
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4678999996 799999885 99999999984 4578999886 333 256899543 1 4569999999999997
Q ss_pred cCceeeeeE-ecCch--hhhccCceeE-EEEecCC--CC----CCCCCCCCCCceEEEecceeecchHHhhhhhcCCCCC
Q 046746 119 KDQIGSYIY-HPSTG--FHRAAGGFGG-LCIHSRS--VV----PVPYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLL 188 (561)
Q Consensus 119 ~~~~Gt~wY-H~H~~--~q~~~Gl~G~-liV~~~~--~~----~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~ 188 (561)
++.+|.++. .+-.. .....+.... +-++... .. ..|... ...+. +-..+-.......+...++.
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l-~~~~~-~~~~~~~~~~~~~l~~~~~~---- 380 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYL-ASYPS-VQHERIQNIRTLKLAGTQDE---- 380 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBC-SCCGG-GCCCCEEEEEEEEEEEEECT----
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccc-cCCCC-cccCCCcceEEEEEEeecCC----
Confidence 554676332 21110 0000011122 2222111 00 011000 00000 00000000000000000000
Q ss_pred CCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCc-------------
Q 046746 189 GKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGS------------- 255 (561)
Q Consensus 189 ~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------- 255 (561)
.....++|||+.+. +...+.++.|++++|+|.|.+. ..|.||||||.|+|++.+|.
T Consensus 381 ~g~~~~~iNg~~~~----------~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~ 449 (513)
T 2wsd_A 381 YGRPVLLLNNKRWH----------DPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARYQESGELSY 449 (513)
T ss_dssp TSCEEEEETTBCTT----------SCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCB
T ss_pred CCCceEeECCccCC----------CcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCcccccccccccccc
Confidence 01125789999871 2245789999999999999886 46799999999999998752
Q ss_pred --c------cceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 256 --H------VVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 256 --~------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
+ -++...|++.|.||+.+.|++++++.+|.|.++++..
T Consensus 450 ~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 450 TGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp SSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred cCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 1 0234789999999999999999965899999999854
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.23 E-value=4.6e-11 Score=100.15 Aligned_cols=78 Identities=14% Similarity=0.203 Sum_probs=62.4
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCceeeeeEecCc
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPST 131 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (561)
+..|..+.|++++||+|+ +.|..+..+++|+++. +||.... +..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 445667999999999965 4699888899998862 2555433 45689999999988 379999999998
Q ss_pred hhhhccCceeEEEEe
Q 046746 132 GFHRAAGGFGGLCIH 146 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (561)
|. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 65 899999985
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-10 Score=124.21 Aligned_cols=230 Identities=16% Similarity=0.088 Sum_probs=140.4
Q ss_pred eeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCC-------ccCCCCCCCCCCCc----c--CCccCCCCeE
Q 046746 47 QQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTWPG-------IQHKKNSWQDGVLG----T--NCPIPPGKNY 112 (561)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG-------~~~~~~~~~DGv~~----~--q~~i~PG~~~ 112 (561)
...+++||+. .|.|.|+.| ++++||.|.. .....++++| ..+. -.+.||.+. . ...|.|||++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEE
Confidence 4579999995 799999985 9999999998 4567889876 2222 245898632 1 5669999999
Q ss_pred EEEEEecCcee-eeeEecCchhhhcc-------CceeEEEEecCCCCCCCCCCCCCCceEEEeccee-ecchHHhhhhhc
Q 046746 113 TYYLQVKDQIG-SYIYHPSTGFHRAA-------GGFGGLCIHSRSVVPVPYNRFVEDDFTLLIGDWY-TRSHVELGKQLD 183 (561)
Q Consensus 113 ~Y~f~~~~~~G-t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~~~~~~~~~e~~l~~~d~~-~~~~~~~~~~~~ 183 (561)
+..++.++.+| +||..+........ ...+.+-+........+. ....+..+.... ..........+.
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~----~~~~P~~L~~~~~p~~~~~~~~~~~ 353 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD----TSVVPANLRDVPFPSPTTNTPRQFR 353 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC----CCCCCCCCCCCSCCCCCCCCCEEEE
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC----CCCCccccccCCCCCCccccceEEE
Confidence 99999755467 68876532100000 011222222111100000 000000000000 000000000000
Q ss_pred CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEee-cCc---cc--
Q 046746 184 SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEM-EGS---HV-- 257 (561)
Q Consensus 184 ~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~-DG~---~~-- 257 (561)
.+ .....++|||+.+.. . .....+.++.|++++|.|.|.+....|.||||||.|+|++. +|. ..
T Consensus 354 ~~---~~~~~w~iNG~~f~~-~------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~ 423 (534)
T 3abg_A 354 FG---RTGPTWTINGVAFAD-V------QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMP 423 (534)
T ss_dssp CS---CCCSTTCCCCBTTBC-T------TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCS
T ss_pred Ee---ccCceeEECCcccCC-C------CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCc
Confidence 00 011257899998610 0 01134689999999999999986667899999999999998 663 11
Q ss_pred -ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 258 -VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 258 -~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
+....|++.+.||+++.|.+.+.+.+|.|.++++..
T Consensus 424 ~~~~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil 460 (534)
T 3abg_A 424 YESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNL 460 (534)
T ss_dssp GGGSCBSEECCCSSEEEEEEEECCSCCEEEEEEESCH
T ss_pred cccCCcCeEEcCCCCEEEEEEEECCCCccEEEecChH
Confidence 125689999999999999998434899999999864
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.4e-11 Score=105.73 Aligned_cols=94 Identities=14% Similarity=0.086 Sum_probs=72.5
Q ss_pred EEecCCCcEEEEEEEcCCCC-CCceeecCCceEEEe------ecCC---CCCcCCCCCCCCCCCCceeEEEeCCCcEEEE
Q 046746 427 VMDATYKAFMEIVLENRQNT-MQSWILDGYAFFAVG------MEPG---TWNPDKRKSYNLIDAVSRYTIQVFPNCWAAI 496 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~-~HP~HlHG~~F~Vl~------~~~g---~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~i 496 (561)
.+.++.|++|+|+|.|.+.. .|.||+|+....+.. ...+ .+.+.. ....++||..|.||+...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 46789999999999999888 899999986532110 0000 111100 1235789999999999999
Q ss_pred EEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 497 LVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 497 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|.+++||.|.||||+..|.. ||+..+.|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999873
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.3e-10 Score=97.38 Aligned_cols=84 Identities=13% Similarity=0.032 Sum_probs=66.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe-CCcce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM-DNAGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a-dnpG~ 505 (561)
.+.++.|++|+| .|.+...|+||+||..+... .|. + .+....++..+.||+...++|.+ +.||.
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~-~---------~~~~~~~~~~i~pG~~~~~~f~~~~~~G~ 84 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKE-L---------ADKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHH-H---------HHHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---ccc-c---------cccccccccccCCCCeEEEEEecCCCCee
Confidence 467899999876 68888899999999877431 010 0 00112588999999999999998 79999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||| .|...||+..+.|.
T Consensus 85 y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 85 YTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CchhcCCEEEEEEc
Confidence 999999 69999999999885
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.5e-09 Score=114.60 Aligned_cols=241 Identities=14% Similarity=0.110 Sum_probs=147.1
Q ss_pred eeEEEECCcCC----------------CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CC
Q 046746 47 QQGILINGQFP----------------GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NC 104 (561)
Q Consensus 47 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~ 104 (561)
...+++||+-. .++|.|++|+++++||.|... ....+|.+|..+.. .+.||.+.. ..
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34688999742 379999999999999999984 45689999976543 568998642 45
Q ss_pred ccCCCCeEEEEEEecCceeeeeEecCchhh----hccCceeEEEEecCCCCCCCCCC-CCCCceEEEecc--eeecch--
Q 046746 105 PIPPGKNYTYYLQVKDQIGSYIYHPSTGFH----RAAGGFGGLCIHSRSVVPVPYNR-FVEDDFTLLIGD--WYTRSH-- 175 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q----~~~Gl~G~liV~~~~~~~~~~~~-~~~~e~~l~~~d--~~~~~~-- 175 (561)
.|.|||+++..+++++..|.||..+..... ...+..-+++..+......|... ....+. .+.+ ..+...
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 699999999999976668999999875321 11111223333332111111100 000000 0000 000000
Q ss_pred HHh------hhhhcCCCCCCCCCeEEEcCccCCCCCCC-------CCCCC---CCceEEE----EcCCEEEEEEEEcCC-
Q 046746 176 VEL------GKQLDSGKLLGKPDGVLINGKSGRLDYDS-------DGKGD---NEPLFTM----KAGKVYKYRICNVGV- 234 (561)
Q Consensus 176 ~~~------~~~~~~~~~~~~~~~~liNG~~~~~~~~~-------~~~~~---~~p~~~v----~~G~~~rlRliN~~~- 234 (561)
..+ ...+..+ ......+.|||..+...+.. +|... ....+.+ +.|+++.|.|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 000 0000000 01123578999876211111 11110 0123444 359999999999872
Q ss_pred CceEEEEEeCcccEEEeecCc------------ccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 235 KTSLNFRIQGHTMKLVEMEGS------------HVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 235 ~~~~~~~i~gh~~~via~DG~------------~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
...|.||+|||.|+|++.+.+ +..|...|++.+.||+.+.+.++++ +||.|.++++..
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 257899999999999998432 2347889999999999999999998 899999999854
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4.3e-10 Score=94.32 Aligned_cols=83 Identities=14% Similarity=0.243 Sum_probs=62.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCC-----CccCCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGV-----LGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv-----~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
.+.|++++||+|++ .|.....+++|.|+.... ..+|. ......+.||++++|.|+.++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 47999999999755 588767788888875332 12332 0012458999999999974368999999999
Q ss_pred hhhccCceeEEEEec
Q 046746 133 FHRAAGGFGGLCIHS 147 (561)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (561)
.+...||.|.|+|++
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 567789999999963
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.8e-09 Score=107.35 Aligned_cols=100 Identities=16% Similarity=0.251 Sum_probs=80.2
Q ss_pred EEECCcC--CCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc--------CCccCCCCeEEEEEEe-
Q 046746 50 ILINGQF--PGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT--------NCPIPPGKNYTYYLQV- 118 (561)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~--------q~~i~PG~~~~Y~f~~- 118 (561)
|++||.. ..|.|.++.||+|++++.|.-.....+|+||..... ...||..+. ...|.||+++++.+..
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v-~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWAD-NRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEES-STTSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEE-EEECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 5667753 368899999999999999998888999999976532 234443221 3458999999999974
Q ss_pred -cCceeeeeEecCchhhhccCceeEEEEecCCC
Q 046746 119 -KDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 119 -~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (561)
++.+|+|.||||...+...||.|.+.|++++.
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 23589999999999999999999999998764
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=98.93 E-value=4e-08 Score=108.32 Aligned_cols=91 Identities=9% Similarity=0.039 Sum_probs=74.2
Q ss_pred CeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc--------------
Q 046746 192 DGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV-------------- 257 (561)
Q Consensus 192 ~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-------------- 257 (561)
..+.+||+.+ .+...+.++.|++++|.|+|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~----------~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~ 527 (612)
T 3gyr_A 459 KTYRRTARTF----------NDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPV 527 (612)
T ss_dssp EEEEEEECST----------TSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCE
T ss_pred ccccccCccC----------CCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCcccccccccccccc
Confidence 4577888876 134678999999999999999874 569999999999998766421
Q ss_pred -------------ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 258 -------------VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 258 -------------~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
++...|+|.+.+|+.+.|.+++.+.+|.|.++|+..
T Consensus 528 ~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 528 RLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 122479999999999999999766899999999865
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.92 E-value=5.3e-09 Score=92.23 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=66.3
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCCC-CeeeeeCCccCC------------C---CCCCCCCCc-c--CCccCCCCeEEEE
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLDE-PFLLTWPGIQHK------------K---NSWQDGVLG-T--NCPIPPGKNYTYY 115 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~~-~~~iH~HG~~~~------------~---~~~~DGv~~-~--q~~i~PG~~~~Y~ 115 (561)
.|--+.|+|++||+|+++++|.-.. .++++.|+.... + ...-++.+. . ...|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4545789999999999999998766 788888764210 0 000001010 0 2348999999999
Q ss_pred EEecCceeeeeEecCchhhhccCceeEEEEe
Q 046746 116 LQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
|++ +++|+|+||||...+.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 995 57999999999888888 999999984
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.1e-09 Score=105.26 Aligned_cols=100 Identities=13% Similarity=0.172 Sum_probs=77.9
Q ss_pred EEECCcCC--CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc-------c-CCccCCCCeEEEEEEe-
Q 046746 50 ILINGQFP--GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG-------T-NCPIPPGKNYTYYLQV- 118 (561)
Q Consensus 50 ~~~Ng~~p--gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-------~-q~~i~PG~~~~Y~f~~- 118 (561)
|.+||+.- -|.|.++.||+|+++|.|.......+|+||...... ..++... . ...|.||+++++.+..
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~-~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDN-RTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEESS-SSSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEEE-ecccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 45577643 588999999999999999998889999999765321 1222211 1 2348999999999874
Q ss_pred -cCceeeeeEecCchhhhccCceeEEEEecCCC
Q 046746 119 -KDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 119 -~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (561)
++.+|+|+||||...+...||.|.+.|++.+.
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 24589999999999999999999999998754
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.87 E-value=2e-08 Score=88.53 Aligned_cols=92 Identities=15% Similarity=0.132 Sum_probs=66.1
Q ss_pred cCCCCeEEecCCCEEEEEEEe--CCCCCeeeeeCCcc------------CC----CCCCCCCCCcc--CCccCCCCeEEE
Q 046746 55 QFPGPNINSTTNDNLVINVFN--KLDEPFLLTWPGIQ------------HK----KNSWQDGVLGT--NCPIPPGKNYTY 114 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N--~l~~~~~iH~HG~~------------~~----~~~~~DGv~~~--q~~i~PG~~~~Y 114 (561)
+|-.+.|+|++||+|+++++| .....++++.+... .. .-+..|..... ...|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 344579999999999999999 66667777776310 00 00000111000 245899999999
Q ss_pred EEEecCceeeeeEecCchhhhccCceeEEEEec
Q 046746 115 YLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 115 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
.|++ +++|+|||||+...+...||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9996 6799999999998888899999999974
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.85 E-value=7.1e-09 Score=90.38 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=56.8
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCceeeeeEecCc
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPST 131 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (561)
+..|-.+.|++++||+|++ .|....++++++... .+|.... ...+.||++++|.|. ++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF~---~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITFN---EAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEEC---SCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEcC---CCEEEEEEeCC
Confidence 4455557999999999765 588766677766432 1122112 345889999999983 69999999987
Q ss_pred hhhhccCceeEEEEe
Q 046746 132 GFHRAAGGFGGLCIH 146 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (561)
|. ||.|.|+|+
T Consensus 122 H~----gM~G~I~V~ 132 (132)
T 3c75_A 122 HP----FMRGKVIVE 132 (132)
T ss_dssp CT----TCEEEEEEC
T ss_pred Cc----CCEEEEEEC
Confidence 54 999999985
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.83 E-value=6.4e-09 Score=87.05 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=63.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe-CCcce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM-DNAGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a-dnpG~ 505 (561)
.+.++.|++|.|+ |.+...|.||+|+..+.. ..|. + . ....+|++.+.||+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~---~~g~-~---~------~~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA---KSAD-L---A------KSLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT---CCHH-H---H------HHHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc---cccc-c---c------hhccccceeeCCCCEEEEEEecCCCCce
Confidence 4678999998884 877788999999865421 0010 0 0 0011467788899999999988 89999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||| .|.+.||+..+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 79999999999885
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.81 E-value=1.3e-08 Score=84.15 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=63.0
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
|..|-...|++++||+|++.++|.....+++...+... ...+.||++.+|.|+ ++++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t-~~~~G~Y~y~C~~- 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVK-PKSAGTYELICRY- 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEEC-CCSCEEEEEECTT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEe-cccCceEEEECcc-
Confidence 34454568999999999999999976666666655422 135789999999999 5789999999975
Q ss_pred hhhccCceeEEEEe
Q 046746 133 FHRAAGGFGGLCIH 146 (561)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (561)
+...||.|.|+|+
T Consensus 88 -H~~~gM~G~i~Ve 100 (100)
T 4hci_A 88 -HLLKGMEGKVIVK 100 (100)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -ccCCCCEEEEEEC
Confidence 4557899999996
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=9.9e-09 Score=84.58 Aligned_cols=80 Identities=16% Similarity=0.253 Sum_probs=58.5
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCC--CCccCCccCCCCeEEEEEEecCceeeeeEecCchhhh
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDG--VLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR 135 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG--v~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (561)
.+.|++++||+|+ ++|.....+++|+|+..... ..|. .+.....+.||++++++|+ ++|+|+|||+ .+.
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~ 87 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQ 87 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Ccc
Confidence 4789999999865 58887778999999853211 1110 0000235789999999885 6999999999 456
Q ss_pred ccCceeEEEEe
Q 046746 136 AAGGFGGLCIH 146 (561)
Q Consensus 136 ~~Gl~G~liV~ 146 (561)
..||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 2plt_A 88 GAGMVGKIIVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 67999999984
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.69 E-value=1.2e-08 Score=84.17 Aligned_cols=81 Identities=15% Similarity=0.221 Sum_probs=57.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|++++||+|++ .|.-...+++|.++....+ ...++.......+.||+++++.| +++|+|+|||+ .+...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg-~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPA-DTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCH-HHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCc-cccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 46899999999765 5876677888888753210 00000000024589999999988 36999999999 45668
Q ss_pred CceeEEEEe
Q 046746 138 GGFGGLCIH 146 (561)
Q Consensus 138 Gl~G~liV~ 146 (561)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.67 E-value=4e-08 Score=86.63 Aligned_cols=96 Identities=10% Similarity=0.098 Sum_probs=70.8
Q ss_pred EEecCCCcEEEEEEEc--CCCCCCceeecCC--ceEEEee-c--CC---CCCcCCCCCCCCCCCCceeEEEeCCCcEEEE
Q 046746 427 VMDATYKAFMEIVLEN--RQNTMQSWILDGY--AFFAVGM-E--PG---TWNPDKRKSYNLIDAVSRYTIQVFPNCWAAI 496 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N--~~~~~HP~HlHG~--~F~Vl~~-~--~g---~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~i 496 (561)
.+.++.|++|.|++.| .+...|.||++.. .+.-+.. + .+ .+-+.. + ....+++|..|.+|....+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP----D-TPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT----T-CTTEEEECCCBCTTEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc----c-cccccccceeeCCCceeEE
Confidence 3678999999999999 6678999999853 2211000 0 00 010000 0 0124689999999999999
Q ss_pred EEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 497 LVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 497 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|.++.||.|.|||++..|...||...+.|.
T Consensus 109 ~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 109 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999885
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.64 E-value=8.8e-08 Score=77.57 Aligned_cols=76 Identities=21% Similarity=0.381 Sum_probs=56.0
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhh
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR 135 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (561)
|-.+.|++++||+|++ .|.....++++.++.. +.. .....+.||+++++.| +++|+|||||+. +.
T Consensus 16 f~P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~--H~ 80 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCEP--HR 80 (91)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECTT--TG
T ss_pred EeCCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeCC--Cc
Confidence 3357899999999765 5876677888888721 000 0124588999998887 469999999994 44
Q ss_pred ccCceeEEEEe
Q 046746 136 AAGGFGGLCIH 146 (561)
Q Consensus 136 ~~Gl~G~liV~ 146 (561)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 56999999984
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1e-07 Score=78.46 Aligned_cols=79 Identities=9% Similarity=0.005 Sum_probs=60.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|+ |.+...|.+|+|+..+- +.... ....|+..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~~~--------------~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADTAA--------------KLSHKGLLFAAGESFTSTF--TEPGTY 79 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHHHH--------------HHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccccc--------------cccccccccCCCCEEEEEc--CCCeEE
Confidence 4678999998885 77778899999875431 00000 0115788999999988876 899999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||| .|...||+..+.|.
T Consensus 80 ~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 80 TYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEECG--GGTTTTCEEEEEEC
T ss_pred EEEcC--CccccCCeEEEEEC
Confidence 99999 69999999999873
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.60 E-value=1.1e-07 Score=78.14 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=61.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|+| .|.+...|.+|+|+..+. .+ ++. ...++|+..+.||+...++| +.||.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p-----~~-~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAIP-----SG-VNA---------DAISRDDYLNAPGETYSVKL--TAAGEY 79 (98)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEECGGGSC-----TT-CCH---------HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCC-----Cc-ccc---------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 477899999887 788778999999874320 00 110 01246899999999988866 589999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||| .|.+.||+..+.|.
T Consensus 80 ~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 80 GYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECG--GGGGGTCEEEEEEC
T ss_pred EEEcC--CccccCCeEEEEEC
Confidence 99999 69999999999873
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.4e-07 Score=77.43 Aligned_cols=77 Identities=19% Similarity=0.339 Sum_probs=55.3
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc---cCCccCCCCeEEEEEEecCceeeeeEecCchhh
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG---TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFH 134 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 134 (561)
.+.|++++||+| ++.|.-...++++.++... .+|... ....+.||+++++.| +++|+|+|||+ .+
T Consensus 18 P~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Ch
Confidence 468999999995 5568765667777776422 112100 124588999999988 47999999999 45
Q ss_pred hccCceeEEEEe
Q 046746 135 RAAGGFGGLCIH 146 (561)
Q Consensus 135 ~~~Gl~G~liV~ 146 (561)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 567999999984
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.58 E-value=1.5e-07 Score=80.60 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=53.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
...|+|++||+|++.+.|. ++++..+.- ..-+|.- ...+.||++++|+|+ ++|+|||+|. .+...
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~--~f~~~pg~t~s~TF~---~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE--SFKSKINESYTLTVT---EPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SSEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--CCCcC
Confidence 3689999999988777762 333333211 1123321 133579999999994 6999999998 45668
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.+.
T Consensus 85 GM~G~I~V~~~ 95 (123)
T 3erx_A 85 GMVGLVQVGDA 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 99999999873
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-07 Score=78.28 Aligned_cols=79 Identities=9% Similarity=0.054 Sum_probs=55.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCC--------CCCCCccCCccCCCCeEEEEEEecCceeeeeEec
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSW--------QDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHP 129 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~--------~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~ 129 (561)
.+.|++++||+|+ +.|.-...++++.+.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 4789999999976 5587666677776631 0000 001000123589999999988 4699999999
Q ss_pred CchhhhccCceeEEEEe
Q 046746 130 STGFHRAAGGFGGLCIH 146 (561)
Q Consensus 130 H~~~q~~~Gl~G~liV~ 146 (561)
+ .+...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 56778999999985
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.53 E-value=2.2e-07 Score=75.21 Aligned_cols=72 Identities=10% Similarity=0.104 Sum_probs=58.0
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|.| .|.+...|.+|+|+.. +...++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~-----------------------~~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQW--VNNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCcEEEEeCCC-----------------------ccCcccceeCCCCEEEEEe--CCCEEE
Confidence 467899999887 4777788999998721 0124788899999888876 899999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||| .|...||...+.|.
T Consensus 73 ~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEEeC--CCccCCCEEEEEEC
Confidence 99999 69999999998873
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.52 E-value=1.5e-07 Score=80.96 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=52.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|+|++||+|++.+.|. ++++..+.- ..-||.- ..-+.||++++|.|+ ++|+|||||.. +...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~~--~f~s~pGet~s~TF~---~pG~y~y~C~~--H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGAE--TWKGKINEEITVTLS---KPGVYMYQCAP--HVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTCC--CCBCCTTCCCEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--CCcC
Confidence 4799999999977666553 333332211 1112221 134579999998884 69999999985 4568
Q ss_pred CceeEEEEecCC
Q 046746 138 GGFGGLCIHSRS 149 (561)
Q Consensus 138 Gl~G~liV~~~~ 149 (561)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999853
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.50 E-value=4.6e-07 Score=74.59 Aligned_cols=77 Identities=18% Similarity=0.293 Sum_probs=56.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------ccCCccCCCCeEEEEEEecCceeeeeEecC
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------GTNCPIPPGKNYTYYLQVKDQIGSYIYHPS 130 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 130 (561)
.+.|++++||+| +++|.-...+++|.++... .+|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC
Confidence 468999999985 5578877778888886422 12221 00135789999999885 6999999999
Q ss_pred chhhhccCceeEEEEe
Q 046746 131 TGFHRAAGGFGGLCIH 146 (561)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (561)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 45667999999984
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.49 E-value=3.9e-07 Score=75.02 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=56.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------ccCCccCCCCeEEEEEEecCceeeeeEecC
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------GTNCPIPPGKNYTYYLQVKDQIGSYIYHPS 130 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 130 (561)
.+.|++++||+|+ ++|.-...++++.++... -+|.- .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 4689999999865 578876677777776322 12210 00135789999999885 6999999999
Q ss_pred chhhhccCceeEEEEe
Q 046746 131 TGFHRAAGGFGGLCIH 146 (561)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (561)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 45667999999984
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.44 E-value=8.1e-07 Score=75.89 Aligned_cols=76 Identities=12% Similarity=0.065 Sum_probs=52.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
...|+|++||+|++. |.- .++++..+... .-+|.. ...+.||++++|+|+ .+|+|||||- .+...
T Consensus 21 P~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~-----~p~g~~--~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD-KSHNAESVREV-----WPEGVA--PVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS-SSCCCEECTTT-----SCTTSC--CCBCCTTCCEEEECC---SSEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEE--ECC-CCccEEEeCCc-----CCCCcc--ccccCCCCEEEEEeC---CCeEEEEEcC--CCCcC
Confidence 368999999996554 543 45555544211 112321 134679999999994 6999999997 45667
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.++
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999874
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.6e-07 Score=75.80 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=58.9
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|+ |.+...|.+++++..+. .+. . ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~~------~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ESA------P------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SCH------H------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----ccc------c------cccccceecCCCCEEEEEe--CCCeEE
Confidence 4678999998774 77778899999876551 000 0 0114667788888888876 899999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||+ .|.+.||...+.|.
T Consensus 79 ~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEECS--STTTTTCEEEEEEC
T ss_pred EEEcc--ChhhcCCEEEEEEC
Confidence 99999 69999999998873
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.42 E-value=7.6e-07 Score=75.11 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=58.3
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|+|.+.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46789999999999999866555544321 125678999999999999999999
Q ss_pred eeecccchhhhccceEEEEEec
Q 046746 507 NLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~ 528 (561)
.||||+..|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999766544 888888753
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.2e-06 Score=72.02 Aligned_cols=83 Identities=10% Similarity=0.071 Sum_probs=60.3
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.| .|.+...|.+|+++..|. .+ .+... . ...+|++.+.+|+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~~---~----~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVTK---I----SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHHH---H----SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccccc---c----cccccceeeCCCCEEEEEe--CCCcE
Confidence 3567899999877 788878999999986541 01 11000 0 0124667788999888866 58999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||+ .|.+.||...+.|.
T Consensus 80 y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCEEEEEEC
Confidence 999999 69999999999873
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=98.32 E-value=7.2e-07 Score=80.16 Aligned_cols=92 Identities=14% Similarity=0.059 Sum_probs=60.5
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCC-------CeeeeeCCccC------CCCCCCC----CCCc-c--CCccCCCCeEE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDE-------PFLLTWPGIQH------KKNSWQD----GVLG-T--NCPIPPGKNYT 113 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~-------~~~iH~HG~~~------~~~~~~D----Gv~~-~--q~~i~PG~~~~ 113 (561)
+|--..|.| +.||+|+|+|+|.... +..|--+|... .....++ +-+. . ...|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454458999 9999999999998643 22332233100 0000001 0011 1 23589999999
Q ss_pred EEEEec-CceeeeeEecCchhhhccCceeEEEEec
Q 046746 114 YYLQVK-DQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 114 Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+.|+++ -++|+|||+|-...+.. ||.|.|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999864 26999999998766666 8999999974
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=98.31 E-value=1.1e-06 Score=72.15 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=54.8
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc--c---CCccCCCCeEEEEEEecCceeeeeEecC
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG--T---NCPIPPGKNYTYYLQVKDQIGSYIYHPS 130 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~---q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 130 (561)
|-.+.|++++||+|++ .|.-...+++....-. .-+|.-. . ...+.||+++++.| +++|+|+|+|.
T Consensus 15 F~P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEch
Confidence 3357899999999654 5876667777665421 1122210 0 12478999999988 36999999998
Q ss_pred chhhhccCceeEEEEe
Q 046746 131 TGFHRAAGGFGGLCIH 146 (561)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (561)
. +...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 6 4456999999984
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-06 Score=72.70 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=50.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|++++||+|++ .|.-. ++++..+- ...-||... ....||++++|.|+ ++|+|+|+|.. +...
T Consensus 20 P~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~~--~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAEK--FKSKINENYVLTVT---QPGAYLVKCTP--HYAM 84 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCCC--CBCCTTCCEEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCccc--eecCCCCEEEEEeC---CCEEEEEEeCC--cccC
Confidence 47899999999765 45432 33333321 111122211 23468999888884 69999999974 5557
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999873
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=98.25 E-value=2.2e-06 Score=73.96 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=61.0
Q ss_pred cCCCCeEEecCC-CEEEEEEEeCCCC-------CeeeeeCCccC-------CCCCCCC----CCCcc---CCccCCCCeE
Q 046746 55 QFPGPNINSTTN-DNLVINVFNKLDE-------PFLLTWPGIQH-------KKNSWQD----GVLGT---NCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v~~G-d~v~v~v~N~l~~-------~~~iH~HG~~~-------~~~~~~D----Gv~~~---q~~i~PG~~~ 112 (561)
+|--..|.|++| |+|+|+|+|.-.. +..|--+|..+ .....++ +-+.+ ...|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 444458999999 9999999998643 33333333110 0000011 01111 2358999999
Q ss_pred EEEEEec--CceeeeeEecCchhhhccCceeEEEEec
Q 046746 113 TYYLQVK--DQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 113 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
++.|+++ .++|+|||.|-...+.. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999964 37999999998776666 8999999964
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.21 E-value=4e-06 Score=69.08 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=59.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|.|++.|.+...|.|.+.+..+ ...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 4678999999999999988778776644322 2356788999999999999999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|+|. .|...||...+.|+
T Consensus 82 ~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEECc--cccCCCCEEEEEEC
Confidence 99997 49999999988874
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.20 E-value=3.1e-06 Score=72.40 Aligned_cols=76 Identities=11% Similarity=0.077 Sum_probs=50.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|++++||+|+ +.|.-. ++++..+. ...-||.. ...+.||++++|.|+ ++|+|+|+|.. +...
T Consensus 20 P~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKFD---KEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEECC---SCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--cccc
Confidence 4689999999965 455532 33333321 11122221 123579999888884 69999999985 5557
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999874
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.20 E-value=9.4e-06 Score=67.59 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=52.7
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCceeeeeEecCchh
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGF 133 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 133 (561)
.|--..|++++||+|++ .|.-...+++...... .|.... ...+.||+++++.| +++|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 44457999999999765 5876555555544321 111111 23578999999988 36999999998754
Q ss_pred hhccCceeEEEEe
Q 046746 134 HRAAGGFGGLCIH 146 (561)
Q Consensus 134 q~~~Gl~G~liV~ 146 (561)
||.|.|+|+
T Consensus 98 ----~M~G~I~V~ 106 (106)
T 1id2_A 98 ----FMRGKVIVE 106 (106)
T ss_dssp ----TCEEEEEEC
T ss_pred ----CCEEEEEEC
Confidence 999999984
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.18 E-value=2e-06 Score=71.15 Aligned_cols=84 Identities=14% Similarity=0.046 Sum_probs=58.0
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCc-eeEEEeCCCcEEEEEEEeCCcce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVS-RYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~-rDTv~vp~~g~~~irf~adnpG~ 505 (561)
.+.++.|++|+|+ |.+...|.++++.-... .+.+.... ..+.+ .+++.+.||+...+.| +.||.
T Consensus 18 ~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL------KAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp EEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH------HHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh------hcccccccceecCCCCEEEEEe--CCCeE
Confidence 5778999998874 77778899998731110 00000000 00112 3667788998888876 89999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|||+ .|...||...+.|.
T Consensus 83 y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 83 YTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CCcccCCeEEEEEC
Confidence 999999 79999999999873
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=98.06 E-value=8.1e-06 Score=85.95 Aligned_cols=96 Identities=14% Similarity=0.061 Sum_probs=65.1
Q ss_pred CCCeee--eEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEec
Q 046746 42 PLGIPQ--QGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVK 119 (561)
Q Consensus 42 ~dG~~~--~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~ 119 (561)
++|.+. .|...+-.|-.+.|+|++||+|++.++|.....-.+ ||..... -| +..-+.||++.++.|+ +
T Consensus 539 RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lG---IK~DaiPGrtnsvtFt-a 608 (638)
T 3sbq_A 539 RDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HG---VSMEISPQQTSSITFV-A 608 (638)
T ss_dssp EETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TT---EEEEECTTCEEEEEEE-C
T ss_pred cCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CC---ceeeeCCCCeEEEEEE-c
Confidence 345443 344556667677999999999999999963211122 2222111 01 1245889999999999 4
Q ss_pred CceeeeeEecCch-hhhccCceeEEEEec
Q 046746 120 DQIGSYIYHPSTG-FHRAAGGFGGLCIHS 147 (561)
Q Consensus 120 ~~~Gt~wYH~H~~-~q~~~Gl~G~liV~~ 147 (561)
+++|+|||+|+.. .....+|.|.|+|++
T Consensus 609 dkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 609 DKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 7899999999853 223357999999987
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=98.03 E-value=1e-05 Score=69.05 Aligned_cols=74 Identities=11% Similarity=0.042 Sum_probs=49.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.+.|+|++||+|++ .|.-. .++++... ...-+|.. ...+.||++++|.|+ ++|+|||+|..|..
T Consensus 20 P~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~--~~~~~~g~t~~~tF~---~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE--AFKSKINENYKVTFT---APGVYGVKCTPHPF--- 83 (122)
T ss_dssp SSEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEEETTEEE---
T ss_pred CCEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc--eeecCCCCEEEEEeC---CCEEEEEEeCCCcc---
Confidence 46899999998655 56533 33333332 11112211 134578999999984 69999999987543
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
|.|.|+|.+.
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999874
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.6e-05 Score=65.19 Aligned_cols=82 Identities=10% Similarity=0.071 Sum_probs=58.5
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.| .|.+...|.++++...+. . + .+. ... ...++.+.+.+|+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p---~--~-~~~-----~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP---S--G-VDA-----SKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC---T--T-CCH-----HHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc---c--c-ccc-----ccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 3577899998877 788778999999875430 0 0 000 000 0113556778898887766 69999
Q ss_pred eeeecccchhhhccceEEEEE
Q 046746 506 WNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V 526 (561)
|.|||+ .|...||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CCcccCCEEEEEE
Confidence 999999 6999999999887
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.1e-05 Score=69.57 Aligned_cols=92 Identities=18% Similarity=0.083 Sum_probs=58.7
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCC-------CeeeeeCCccC-------CCC------CCCCCCCc-cCCccCCCCeE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDE-------PFLLTWPGIQH-------KKN------SWQDGVLG-TNCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~-------~~~iH~HG~~~-------~~~------~~~DGv~~-~q~~i~PG~~~ 112 (561)
+|--..|.| ++||+|+|+|+|.-.. +..|--+|..+ ... +..|.--. ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 443458999 9999999999998643 23332232100 000 00111000 02358999999
Q ss_pred EEEEEec-Cceee-eeEecCchhhhccCceeEEEEec
Q 046746 113 TYYLQVK-DQIGS-YIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 113 ~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+..|+++ -++|+ |||.|-...+.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 9999963 04655 999998766666 8999999963
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=97.92 E-value=2.1e-05 Score=65.29 Aligned_cols=71 Identities=10% Similarity=-0.038 Sum_probs=50.9
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|+| .|.+...|.+|+|... .|. +. -++-.+.+|+...+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~--~N~d~~~H~v~~~~~~-------~g~-------------~~-~~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTW--INREAMPHNVHFVAGV-------LGE-------------AA-LKGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTTT-------SSS-------------SC-EECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCEEEEEcCCC-------CCc-------------cc-ccccccCCCCEEEEEe--CCCEEE
Confidence 467899999888 5887788999988522 111 00 1222367888776665 899999
Q ss_pred eeecccchhhhccceEEEEE
Q 046746 507 NLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V 526 (561)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 54 99888877
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=97.85 E-value=9.3e-05 Score=63.53 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=58.6
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCCC-----e--eeeeCCccC-------CCCCCCCCC----Cc-c--CCccCCCCeE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDEP-----F--LLTWPGIQH-------KKNSWQDGV----LG-T--NCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~--~iH~HG~~~-------~~~~~~DGv----~~-~--q~~i~PG~~~ 112 (561)
+|--..|.| ++||+|+|+|+|.-..+ + .|--.|..+ .....+|=+ +. . ...|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454458999 99999999999986432 3 332222110 000011100 10 1 2348999999
Q ss_pred EEEEEecC-ceee-eeEecCchhhhccCceeEEEEe
Q 046746 113 TYYLQVKD-QIGS-YIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 113 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
++.|+++. ++|+ |||.|....+.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999631 4776 999998776777 899999984
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=97.83 E-value=4.6e-05 Score=65.44 Aligned_cols=92 Identities=18% Similarity=0.104 Sum_probs=59.0
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCCC-----eeee--eCC---------ccC----CCCCCCCCCCcc-CCccCCCCeE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDEP-----FLLT--WPG---------IQH----KKNSWQDGVLGT-NCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~~iH--~HG---------~~~----~~~~~~DGv~~~-q~~i~PG~~~ 112 (561)
+|--..|.| +.||+|+|+++|.-..+ +++- -.+ +.. .--+..|.--.. ...|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454458999 99999999999986443 3322 111 000 000001110000 2347999999
Q ss_pred EEEEEec-Cceee-eeEecCchhhhccCceeEEEEec
Q 046746 113 TYYLQVK-DQIGS-YIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 113 ~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
++.|+++ -++|+ |+|.|....+.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 9999963 15885 999998776766 8999999963
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.79 E-value=5.4e-05 Score=81.38 Aligned_cols=75 Identities=8% Similarity=0.120 Sum_probs=60.3
Q ss_pred EEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc
Q 046746 427 VMDATYKAFMEIVLENRQ---NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA 503 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp 503 (561)
.+.++.|+.|+|.+.|.+ +..|.|+++++.+. ..+.||....++|.++.|
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~p 566 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAANP 566 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSC
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCCC
Confidence 467899999999999964 34799988775321 457889999999999999
Q ss_pred ceeeeeccc---chhhhccceEEEEEecCC
Q 046746 504 GMWNLRSNI---WERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 504 G~w~~HCHi---l~H~d~GMm~~~~V~~~~ 530 (561)
|.|.||||. ..|. ||...+.|.+++
T Consensus 567 GtY~yhC~e~Cg~~H~--gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHM--EMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTCT--TCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCcc--CCEEEEEEEcCC
Confidence 999999993 3564 999999997653
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=97.77 E-value=9.9e-05 Score=65.67 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=59.8
Q ss_pred eEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeE-------EEeCCCc--EEE
Q 046746 426 NVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYT-------IQVFPNC--WAA 495 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDT-------v~vp~~g--~~~ 495 (561)
..+.++.|+.|.+++.|.+ ...|-|-++.. +. .+.. . |...+. ..|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~~-~~~~-----~----~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKK-------GP-PYAV-----M----PVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESC-------CS-CCCS-----S----CCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------Cc-chhc-----c----ccccccccccccccccCCCCceEEE
Confidence 3578999999999999974 55666655522 11 0100 0 000111 1567888 899
Q ss_pred EEEEeCCcceeeeecccchhhhccceEEEEE
Q 046746 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 496 irf~adnpG~w~~HCHil~H~d~GMm~~~~V 526 (561)
++|.+ .||.+.||||+--|...||-..+.|
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999 9999999999999999999999887
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00079 Score=57.26 Aligned_cols=75 Identities=8% Similarity=0.027 Sum_probs=51.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|+|+ |.+ ..|-+..+.. .+.. . .+.+.+.+|....+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~--n~~-~~Hnv~~~~~----------~~p~-g-----------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFV--PTD-KSHNAESVRE----------VWPE-G-----------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEE--CSS-SSCCCEECTT----------TSCT-T-----------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEE--ECC-CCccEEEeCC----------cCCC-C-----------ccccccCCCCEEEEEe--CCCeEE
Confidence 5778999999985 444 5676665421 1110 0 0122244677766665 899999
Q ss_pred eeecccchhhhccceEEEEEecCC
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
.|||- .|...||...+.|.++.
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEcC--CCCcCCCEEEEEECCCC
Confidence 99996 69999999999998753
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00093 Score=55.30 Aligned_cols=71 Identities=11% Similarity=-0.066 Sum_probs=49.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|.|+ |.+...|.+++....- |. ...++-.+.+|....+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-------~~--------------~~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE--------------DAFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS--------------SCEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCCC-------Cc--------------ccccccccCCCCEEEEEe--CCCEEE
Confidence 4678999999885 7777778776653210 00 001233466788777766 899999
Q ss_pred eeecccchhhhccceEEEEE
Q 046746 507 NLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V 526 (561)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999987 65 99988877
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0016 Score=53.01 Aligned_cols=80 Identities=13% Similarity=0.105 Sum_probs=55.2
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|+.|+| .|.+...|-+.++...+ . . .++. .....+...+.+|....+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~----------p-~---g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV----------P-A---GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS----------C-T---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC----------c-c---cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 3578899999888 47766778776654111 0 0 0000 00113456788999888776 89999
Q ss_pred eeeecccchhhhccceEEEEE
Q 046746 506 WNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V 526 (561)
|.|+|-+ |...||-..+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999986 988899998877
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00065 Score=58.13 Aligned_cols=75 Identities=13% Similarity=0.017 Sum_probs=49.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|++.|. .|-+..+.. .+ |... ..+.+.||+...+.| +.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~TF--~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVTL--SKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 57789999999966552 455444321 01 1100 111224677655555 899999
Q ss_pred eeecccchhhhccceEEEEEecCC
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
.|||- .|...||...+.|.++.
T Consensus 77 ~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 77 MYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEeC--CCCcCCcEEEEEECcCC
Confidence 99999 59999999999998754
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0035 Score=52.94 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=55.1
Q ss_pred cCCCCeEEecC-CCEEEEEEEeCCCC-------Ceeeee---------CCccCCCCCCCCCC----Ccc---CCccCCCC
Q 046746 55 QFPGPNINSTT-NDNLVINVFNKLDE-------PFLLTW---------PGIQHKKNSWQDGV----LGT---NCPIPPGK 110 (561)
Q Consensus 55 ~~pgP~i~v~~-Gd~v~v~v~N~l~~-------~~~iH~---------HG~~~~~~~~~DGv----~~~---q~~i~PG~ 110 (561)
+|--..|.|+. |++|+|+|+|.... +..|-- -|+.. .+.+|=+ +-+ ...|.||+
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~--~~~~~y~~~~d~~via~t~~l~pGe 91 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMAS--GLDKDYLKPDDSRVIAHTKLIGSGE 91 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHH--CGGGTTSCTTCTTCCEECCCBCTTC
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhc--ChhhccCCCCCccceeccceeCCCc
Confidence 45557899976 99999999999743 332221 11110 0011111 111 33489999
Q ss_pred eEEEEEEec--CceeeeeEecCchhhhccCceeEEEEe
Q 046746 111 NYTYYLQVK--DQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 111 ~~~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
+++..|+.+ .++|+|.|.|. .+. ||.|.++|.
T Consensus 92 s~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 92 KDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999999975 26999999999 344 899999984
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0016 Score=55.38 Aligned_cols=74 Identities=11% Similarity=0.059 Sum_probs=50.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|++.|. .|-+..+.. .+ +... +.+.+.||+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 57789999999977762 355544321 11 1100 111234677666666 899999
Q ss_pred eeecccchhhhccceEEEEEecC
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
.|+|- .|...||-..+.|.++
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESSS
T ss_pred EEEeC--CCCcCCcEEEEEECCC
Confidence 99999 6999999999999863
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0016 Score=56.24 Aligned_cols=72 Identities=11% Similarity=-0.063 Sum_probs=50.6
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|+|+ |.+...|-+++....- |. ...++-.+.+|+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~~-------g~--------------~~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE--------------DAFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS--------------SCEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCCC-------Cc--------------ccccccccCCCCEEEEEc--CCCEEE
Confidence 4678999999884 8777778877643210 00 001333467888877776 799999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|||-+ |. ||...+.|+
T Consensus 116 ~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--Cc--CCEEEEEEC
Confidence 999987 66 999988773
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0081 Score=51.85 Aligned_cols=75 Identities=16% Similarity=0.192 Sum_probs=52.2
Q ss_pred CeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch-hhhcc
Q 046746 59 PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG-FHRAA 137 (561)
Q Consensus 59 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~ 137 (561)
..|.+..|++|++.++|. +.. |+..... -| +..-+.||+.-++.|+. +++|+|+|+|..- .....
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~-----Hsf~ip~----~~---~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~ 125 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEG----TN---INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 125 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSC-----EEEEETT----SS---CEEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTST
T ss_pred CEEEEcCCCEEEEEEEeC-Ccc-----ceEEecC----CC---ceeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcC
Confidence 489999999999999997 222 3332211 11 12346899988899984 7899999999541 11224
Q ss_pred CceeEEEEec
Q 046746 138 GGFGGLCIHS 147 (561)
Q Consensus 138 Gl~G~liV~~ 147 (561)
+|.|.++|.+
T Consensus 126 ~M~g~v~V~~ 135 (135)
T 2cua_A 126 NMFGTIVVKE 135 (135)
T ss_dssp TCEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 8999998864
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=96.33 E-value=0.019 Score=51.32 Aligned_cols=81 Identities=15% Similarity=0.136 Sum_probs=56.9
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCc-
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPST- 131 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~- 131 (561)
+-.|--..|.+..|++|++.++|. +.-++...-++ +++.-+.||+..++.|+ ++++|+|++.|..
T Consensus 87 ~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~l------------gik~da~PG~~n~~~~~-~~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 87 AFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGT------------NINVEVLPGEVSTVRYT-FKRPGEYRIICNQY 152 (168)
T ss_dssp TTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTS------------SCEEEECTTBCEEEEEE-CCSCEEEEEECCSC
T ss_pred eceEecCEEEEeCCCeEEEEEecC-CceEEEEECCC------------CeEEEecCCceeEEEEE-eCCCEEEEEECCcC
Confidence 334434589999999999999997 33333322222 11234679999999998 4789999999984
Q ss_pred hhhhccCceeEEEEec
Q 046746 132 GFHRAAGGFGGLCIHS 147 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~~ 147 (561)
-.....+|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 2444567999999874
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.012 Score=49.84 Aligned_cols=37 Identities=11% Similarity=0.086 Sum_probs=29.9
Q ss_pred CCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecC
Q 046746 489 FPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 489 p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
.+|....+. ++.||.|.|+|- .|...||...+.|.++
T Consensus 59 ~pG~t~~~t--F~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 59 KINENYVLT--VTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CTTCCEEEE--CCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCCCEEEEE--eCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 467765544 488999999997 4999999999999763
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.024 Score=59.89 Aligned_cols=76 Identities=8% Similarity=0.111 Sum_probs=59.3
Q ss_pred eEEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC
Q 046746 426 NVMDATYKAFMEIVLENRQ---NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN 502 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn 502 (561)
..+.++.|+.|+|++.|.+ +..|.|-+.+... -+.+.||....+.|.++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 3567999999999999974 5677776655322 125677899999999999
Q ss_pred cceeeeecccchhh-hccceEEEEEec
Q 046746 503 AGMWNLRSNIWERN-YLGQQLYLSVRL 528 (561)
Q Consensus 503 pG~w~~HCHil~H~-d~GMm~~~~V~~ 528 (561)
||.|.+||...-|. |.+|...+.|++
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999976554 568888888753
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.012 Score=49.92 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=30.1
Q ss_pred CCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEecC
Q 046746 489 FPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 489 p~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 529 (561)
.+|....+.| +.||.|.|+|- .|...||...+.|.++
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 59 TVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred CCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 4677655554 88999999998 4999999999999764
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.067 Score=46.03 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=50.7
Q ss_pred EecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceee
Q 046746 428 MDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~ 507 (561)
+.++.|+.|+|++.|.+ ..|. |+|-+ ++ --+.+.||....+.|.++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~-------------~~-------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEG-------------TN-------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETT-------------SS-------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecC-------------CC-------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 56899999999999874 4443 43311 11 113456788888999999999999
Q ss_pred eecccch-hhhccceEEEEEe
Q 046746 508 LRSNIWE-RNYLGQQLYLSVR 527 (561)
Q Consensus 508 ~HCHil~-H~d~GMm~~~~V~ 527 (561)
++|...- .-|.+|-..+.|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9997621 1335888888875
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.044 Score=48.89 Aligned_cols=91 Identities=9% Similarity=-0.017 Sum_probs=60.0
Q ss_pred EEec-CCCcEEEEEEEcCCCC-----CCceeecCCceEEEeecCCCCCcC-------CCCCCC-CCC-CCceeEEEeCCC
Q 046746 427 VMDA-TYKAFMEIVLENRQNT-----MQSWILDGYAFFAVGMEPGTWNPD-------KRKSYN-LID-AVSRYTIQVFPN 491 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~~-------~~~~~n-~~~-P~~rDTv~vp~~ 491 (561)
-+.+ +.|+.|.|+|.|.+.. .|-|-| ...+. +... ....|- ..+ -....|..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi-------~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVI-------AKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEE-------EEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEe-------ccCcc--hhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 3678 8999999999998754 254433 22210 0000 000000 001 123456678999
Q ss_pred cEEEEEEEeC--CcceeeeecccchhhhccceEEEEEe
Q 046746 492 CWAAILVSMD--NAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 492 g~~~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+...|.|.++ .||.|-|+|-+--|.. ||-..+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999987 8999999999888888 898888885
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=95.13 E-value=0.037 Score=46.77 Aligned_cols=71 Identities=6% Similarity=-0.012 Sum_probs=45.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.|+ |.+. .|-++++. +.+.. ... .+.+.+|....+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~----------~~~p~-~~~-----------~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-GHNVETIK----------GMIPD-GAE-----------AFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-SCCCEECT----------TCSCT-TCC-----------CCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCC-CcEEEEcc----------cccCC-Ccc-----------eeecCCCCEEEEEe--CCCEEE
Confidence 5678999998885 4443 56666543 11111 000 11224677666665 899999
Q ss_pred eeecccchhhhccceEEEEEec
Q 046746 507 NLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~ 528 (561)
.|+|-+ |.. |...+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999987 655 988998876
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=94.46 E-value=0.14 Score=43.63 Aligned_cols=91 Identities=8% Similarity=0.027 Sum_probs=60.0
Q ss_pred EEecCCC-cEEEEEEEcCCCC-----CCceeecCCceEEEeecCCCCCc-------CCC-CCCCC-CCC-CceeEEEeCC
Q 046746 427 VMDATYK-AFMEIVLENRQNT-----MQSWILDGYAFFAVGMEPGTWNP-------DKR-KSYNL-IDA-VSRYTIQVFP 490 (561)
Q Consensus 427 ~~~~~~g-~~ve~vl~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~-------~~~-~~~n~-~~P-~~rDTv~vp~ 490 (561)
-+.++.| +.|.+++.|.+.. .|-|- +...+. ... ... ..+-. .++ ....|..|.|
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~v-------i~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHNWV-------LAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBCCE-------EEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccceE-------EecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 4778999 9999999998754 35443 332210 000 000 00000 011 1235667889
Q ss_pred CcEEEEEEEeC---CcceeeeecccchhhhccceEEEEEe
Q 046746 491 NCWAAILVSMD---NAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 491 ~g~~~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|++..+.|.++ .||.|-|.|-+--|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 99999999997 8999999999888888 898888885
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=93.81 E-value=0.25 Score=44.00 Aligned_cols=72 Identities=10% Similarity=0.191 Sum_probs=54.1
Q ss_pred EecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceee
Q 046746 428 MDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~ 507 (561)
+.++.|+.|++.+.|. +..|.|-+=... =-+.+.||..-.+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------------------------ik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSS---------------------------CEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCC---------------------------eEEEecCCceeEEEEEeCCCEEEE
Confidence 5689999999999997 555655442211 113355788888999999999999
Q ss_pred eeccc-chhhhccceEEEEEe
Q 046746 508 LRSNI-WERNYLGQQLYLSVR 527 (561)
Q Consensus 508 ~HCHi-l~H~d~GMm~~~~V~ 527 (561)
+.|.. --+.|.+|...+.|+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99985 346678999998885
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=93.33 E-value=0.22 Score=42.27 Aligned_cols=91 Identities=8% Similarity=-0.073 Sum_probs=59.2
Q ss_pred EEec-CCCcEEEEEEEcCCCCC-----CceeecCCceEEEeecCCCCCcC-------CC-CCCC-CCCC-CceeEEEeCC
Q 046746 427 VMDA-TYKAFMEIVLENRQNTM-----QSWILDGYAFFAVGMEPGTWNPD-------KR-KSYN-LIDA-VSRYTIQVFP 490 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~~-----HP~HlHG~~F~Vl~~~~g~~~~~-------~~-~~~n-~~~P-~~rDTv~vp~ 490 (561)
-+.+ +.|+.|.+++.|.+... |-|-| ...+ ..... .. ..|- -.++ ....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE-------cccc--chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 4677 77999999999987553 65433 2211 00000 00 0010 0111 2335667899
Q ss_pred CcEEEEEEEeC--Ccce-eeeecccchhhhccceEEEEEe
Q 046746 491 NCWAAILVSMD--NAGM-WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 491 ~g~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|++..+.|.+. .||. |-|.|-+--|.. ||-..+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999888888 899988884
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=92.26 E-value=0.42 Score=40.62 Aligned_cols=91 Identities=10% Similarity=-0.065 Sum_probs=58.8
Q ss_pred EEec-CCCcEEEEEEEcCCCC-----CCceeecCCceEEEeecCCCCCcC-------CC-CCCCC-CCC-CceeEEEeCC
Q 046746 427 VMDA-TYKAFMEIVLENRQNT-----MQSWILDGYAFFAVGMEPGTWNPD-------KR-KSYNL-IDA-VSRYTIQVFP 490 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~-----~HP~HlHG~~F~Vl~~~~g~~~~~-------~~-~~~n~-~~P-~~rDTv~vp~ 490 (561)
-+.+ +.|+.|.+++.|.+.. .|-|-| ...+ ..... .+ ..|-. .++ ....|..|.|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVL-------TKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCEE-------EEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEEE-------cCcc--chhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 4678 7799999999998755 354433 2221 00000 00 00100 011 1234567899
Q ss_pred CcEEEEEEEeC--Ccce-eeeecccchhhhccceEEEEEe
Q 046746 491 NCWAAILVSMD--NAGM-WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 491 ~g~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|++..+.|.++ .||. |-|.|-+--|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7866 999999888888 899888884
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=92.22 E-value=0.45 Score=40.33 Aligned_cols=92 Identities=10% Similarity=-0.020 Sum_probs=58.5
Q ss_pred EEec-CCCcEEEEEEEcCCCC-----CCceeecCCceEEEeecCC------CCCcCCCCCC-CCCCC-CceeEEEeCCCc
Q 046746 427 VMDA-TYKAFMEIVLENRQNT-----MQSWILDGYAFFAVGMEPG------TWNPDKRKSY-NLIDA-VSRYTIQVFPNC 492 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~-----~HP~HlHG~~F~Vl~~~~g------~~~~~~~~~~-n~~~P-~~rDTv~vp~~g 492 (561)
-+.+ +.|+.|.+++.|.+.. .|-|-| ...+.- .........| .-.++ ....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 4678 7999999999998755 365443 221100 0000000001 00111 223455689999
Q ss_pred EEEEEEEeC--Ccce-eeeecccchhhhccceEEEEE
Q 046746 493 WAAILVSMD--NAGM-WNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 493 ~~~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V 526 (561)
+..+.|.+. .||. |-|.|-+--|.. ||-..+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7876 999999888888 88888877
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=87.04 E-value=0.77 Score=38.57 Aligned_cols=93 Identities=10% Similarity=0.023 Sum_probs=57.1
Q ss_pred eEEecCC-CcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCc-------CCC-CCC-CC-CCCCceeEEEeCCCcEE
Q 046746 426 NVMDATY-KAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNP-------DKR-KSY-NL-IDAVSRYTIQVFPNCWA 494 (561)
Q Consensus 426 ~~~~~~~-g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~-------~~~-~~~-n~-~~P~~rDTv~vp~~g~~ 494 (561)
.-+.++. |+.|.++|.|.+..+ --.=||.| ||+... .... ..+ ..| .. .......|..|.||+..
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred CEEEEecCCCEEEEEEEECCccc--ccccCceE-EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 3467876 999999999987542 00002333 333311 0000 000 011 00 12245577789999999
Q ss_pred EEEEEeC---CcceeeeecccchhhhccceEEEEE
Q 046746 495 AILVSMD---NAGMWNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 495 ~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V 526 (561)
.|.|.+. .+|.|-|-|- -|. ||-..+.|
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9999987 8999999999 688 89888877
|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=85.13 E-value=6.4 Score=32.67 Aligned_cols=71 Identities=14% Similarity=0.330 Sum_probs=49.9
Q ss_pred cCCE--EEEEEEEcCCCceEEEEEe-CcccEEEe--ecCcccc--------eeeeeeEEEcccceEEEEEEeCC--CCCc
Q 046746 221 AGKV--YKYRICNVGVKTSLNFRIQ-GHTMKLVE--MEGSHVV--------QNEYESLDVHVGQCFTVLVTANQ--DPKD 285 (561)
Q Consensus 221 ~G~~--~rlRliN~~~~~~~~~~i~-gh~~~via--~DG~~~~--------p~~~~~v~l~pgeR~dv~v~~~~--~~g~ 285 (561)
.|+. ..|.+.|.+.. ...+.+. |+.+.++- .+|..+- .+......|.|||...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 4444 45778898884 4477775 66544444 4576552 23567899999999999999884 5799
Q ss_pred eEEEEEe
Q 046746 286 YYLIAST 292 (561)
Q Consensus 286 y~i~~~~ 292 (561)
|.+.+.-
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 561 | ||||
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 9e-37 | |
| d1aoza3 | 214 | b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C | 6e-34 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 6e-32 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 9e-32 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 6e-31 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 1e-28 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 2e-27 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 3e-27 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 1e-26 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 3e-26 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 2e-24 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 2e-17 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 5e-16 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 1e-14 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 2e-13 | |
| d2bw4a1 | 157 | b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige | 6e-13 | |
| d1gska1 | 181 | b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci | 1e-12 | |
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 3e-12 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 1e-11 | |
| d1sdda1 | 180 | b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t | 1e-11 | |
| d2q9oa3 | 216 | b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce | 5e-11 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 4e-10 | |
| d2j5wa3 | 207 | b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap | 8e-10 | |
| d1mzya1 | 153 | b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba | 1e-09 | |
| d2j5wa4 | 179 | b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap | 1e-08 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 7e-07 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 3e-06 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 4e-06 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 1e-05 | |
| d1v10a3 | 190 | b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus | 8e-05 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 1e-04 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 0.002 | |
| d1sdda2 | 116 | b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos | 0.002 |
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 133 bits (336), Expect = 9e-37
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 154 PYNRFVEDDFTLLIGDWYTRSHVELGKQLDSG--KLLGKPDGVLINGKSGRLDYDSDGKG 211
P++ + + LL+ DW+ +S + L S + +G+P +L+NG+ +
Sbjct: 1 PFH--YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYD 58
Query: 212 DN-------------EPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV 258
N +F + K Y+ RI + +LNF I H + +VE +G++V
Sbjct: 59 SNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQ 118
Query: 259 QNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT--VITTTAIVRYSDSKGLASP 316
+D++ G+ ++VL+T +Q+P + Y ++ R ++ Y + P
Sbjct: 119 PFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLP 178
Query: 317 DLPKAPVGWDW-SLNQFRSFRWNLTASAARP 346
P P W ++ ++F + +TA+ P
Sbjct: 179 TSPP-PQTPAWDDFDRSKNFTYRITAAMGSP 208
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 126 bits (316), Expect = 6e-34
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 20/213 (9%)
Query: 359 INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGI--------PEEVFKYNVI 410
NR I L NT +++NG V++A+N VS TP A Y + P EVF +
Sbjct: 5 FNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYD 64
Query: 411 SDKPADEIENVTLQPNVMDATYKAFMEIVLENR------QNTMQSWILDGYAFFAVGMEP 464
D P E + V ++++L+N + W L G+ F+ +G
Sbjct: 65 IDTPPTN-EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 123
Query: 465 GTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYL 524
G ++ ++ S NL + R T+ +FP W AI DN G+W +I ++G +
Sbjct: 124 GKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 183
Query: 525 SVRLHKRSLRDEYNMPDNALLCGIVANMSKPTP 557
+ + +P AL CG A P
Sbjct: 184 AE-----GVEKVGRIPTKALACGGTAKSLINNP 211
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 119 bits (298), Expect = 6e-32
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 160 EDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTM 219
+ + I DWY L K PD LING ++ + ++
Sbjct: 5 DASTVITIADWYHSLSTVLFPNP--NKAPPAPDTTLINGLGR---NSANPSAGQLAVVSV 59
Query: 220 KAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTA 279
++GK Y++RI + + F I GH M ++E++G +SL + GQ ++V+V A
Sbjct: 60 QSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEA 119
Query: 280 NQDPKDYYLIASTRFTRTVI---TTTAIVRYSDS 310
NQ +Y++ A+ R +AI RY +
Sbjct: 120 NQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGA 153
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 117 bits (293), Expect = 9e-32
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFL-----LTW 85
+ V +SP G + I++NG FP P I D +NV + L + + W
Sbjct: 6 ASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHW 65
Query: 86 PGIQHKKNSWQDGVLGTN-CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLC 144
G +W DG N CPI G ++ Y V DQ G++ YH G G
Sbjct: 66 HGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFV 125
Query: 145 IH 146
++
Sbjct: 126 VY 127
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 114 bits (287), Expect = 6e-31
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 32 TWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLT-----WP 86
T +T +SP G + GIL+NG GP I NDN +NV N LD P +L W
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 87 GIQHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCI 145
G+ + +W DG G CPI PG + Y G++ YH G G G + I
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
Query: 146 H 146
+
Sbjct: 127 Y 127
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 110 bits (275), Expect = 1e-28
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 10/169 (5%)
Query: 160 EDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTM 219
D I D+Y R+ +L + D VLING + + G+G T+
Sbjct: 3 IDLGVFPITDYYYRAADDLVHFTQNNAP-PFSDNVLINGTAV---NPNTGEGQYAN-VTL 57
Query: 220 KAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTA 279
GK ++ RI N + + HTM ++ + V +SL + VGQ + V++ A
Sbjct: 58 TPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDA 117
Query: 280 NQDPKDYYLIASTRFTRTV-----ITTTAIVRYSDSKGLASPDLPKAPV 323
++ P +Y+ + AI Y+ + G D PV
Sbjct: 118 SRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPV 166
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 105 bits (263), Expect = 2e-27
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 7/123 (5%)
Query: 31 FTWNVTYGTISPLGI-PQQGILINGQFPGPNINSTTNDNLVINVFNK-----LDEPFLLT 84
++ + P G + + G P I +D INV ++ + +
Sbjct: 5 LDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIH 64
Query: 85 WPGIQHKKNSWQDGVLGTN-CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGL 143
W G + DG N CPI P +++ Y V Q G+Y YH G G
Sbjct: 65 WHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAF 124
Query: 144 CIH 146
++
Sbjct: 125 VVY 127
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 105 bits (264), Expect = 3e-27
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 161 DDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMK 220
++ + + DWY + +PD LINGK GR + + ++
Sbjct: 11 ENTIITLADWYHIPAPSIQGAA-------QPDATLINGK-GRYVGGPAAEL---SIVNVE 59
Query: 221 AGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTAN 280
GK Y+ R+ ++ + F I GH + ++E++G + + L + GQ ++ ++ AN
Sbjct: 60 QGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDAN 119
Query: 281 QDPKDYYLIASTRFTRTVI-------TTTAIVRYSDSKGLASPDLPKAP 322
Q +Y++ A R + +AI+RY+ + A P P
Sbjct: 120 QPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAAN-ADPTTSANP 167
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 102 bits (256), Expect = 1e-26
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 30 FFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNK-LDEPFLLTWPGI 88
+ W V Y +P + INGQFPGP I + D++V+ + NK E ++ W GI
Sbjct: 5 HYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGI 64
Query: 89 QHKKNSWQDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146
+ W DG + C I PG+ + Y V D G++ YH G R+AG +G L +
Sbjct: 65 LQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 103 bits (257), Expect = 3e-26
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 160 EDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTM 219
+ + + DWY + LG + G D LING S +
Sbjct: 11 NESTVITLTDWYHTAA-RLGPRFPLG-----ADATLINGLG---RSASTPTAALAV-INV 60
Query: 220 KAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTA 279
+ GK Y++R+ ++ + F I GH + ++E++G + +S+ + Q ++ ++ A
Sbjct: 61 QHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNA 120
Query: 280 NQDPKDYYLIASTRFTRTVI---TTTAIVRYSDS 310
NQ +Y++ A+ F +AI+RY +
Sbjct: 121 NQTVGNYWIRANPNFGTVGFAGGINSAILRYQGA 154
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 97.9 bits (243), Expect = 2e-24
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Query: 28 TFFFTWNVTYGTISPLGIP-QQGILINGQFPGPNINSTTNDNLVINVFNKLDE-PFLLTW 85
++ F + P G+ ++ +LING GPNI + D + + V N L + W
Sbjct: 35 SYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHW 94
Query: 86 PGIQHKKNSWQDGVLGTN-CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLC 144
GI K + DG G CPIPP Y Q G+ YH G G +
Sbjct: 95 HGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQ 154
Query: 145 IHSRSVVP 152
I+ + +P
Sbjct: 155 INGPASLP 162
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 77.1 bits (189), Expect = 2e-17
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 31 FTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQH 90
+ G + G NG GP + + ++++N+L E L W G++
Sbjct: 18 IQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV 77
Query: 91 KKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHP----STGFHRAAGGFGGLCIH 146
DG IPPG + L V + +HP TG A G G + I
Sbjct: 78 --PGEVDGG--PQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIE 133
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 73.2 bits (179), Expect = 5e-16
Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 11/138 (7%)
Query: 23 EAGSPTFFFTWNVTYG--TISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEP 80
++G FT + I G Q + NG PGP + D + + + N
Sbjct: 27 KSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATN- 85
Query: 81 FLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYH----PSTGFHRA 136
++ + G + PG+ T + D+ G+++YH +H
Sbjct: 86 --AMPHNVEFHGATGALGG-AKLTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVV 141
Query: 137 AGGFGGLCIHSRSVVPVP 154
+G G L + R + P
Sbjct: 142 SGMSGTLMVLPRDGLKDP 159
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 69.3 bits (169), Expect = 1e-14
Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 8/112 (7%)
Query: 44 GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103
G+ + +G PG I D + + N + + Q G
Sbjct: 43 GVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSS---TVPHNVDFHAATGQGGG-AAA 98
Query: 104 CPIPPGKNYTYYLQVKDQIGSYIYHP---STGFHRAAGGFGGLCIHSRSVVP 152
PG+ T+ + Q G YIYH G H A G +G + + + +P
Sbjct: 99 TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP 149
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 66.2 bits (161), Expect = 2e-13
Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 25/178 (14%)
Query: 150 VVPVPYNRFVEDDFTLLIGDWYTRSHVEL--GKQLDSGKLLGKPDGVLINGKSGRLDYDS 207
++P + DD +++ D + ++ + + + D +L NG
Sbjct: 1 MLPKQWG---IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP----- 52
Query: 208 DGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFR-IQGHTMKLVEMEGSHVVQ-NEYESL 265
+ R+ N SLNF + ++ +G + + + L
Sbjct: 53 ---------QHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSEL 103
Query: 266 DVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVIT----TTAIVRYSDSKGLASPDLP 319
V +G+ F VLV N + + I ++R AS LP
Sbjct: 104 PVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALP 161
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 64.3 bits (156), Expect = 6e-13
Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 11/141 (7%)
Query: 14 LAAATSGLVEAGSPTFFFTWNVTYG--TISPLGIPQQGILINGQFPGPNINSTTNDNLVI 71
A + + G FT + I G + NG PGP + ND + +
Sbjct: 17 FVHAHDQVAKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVEL 76
Query: 72 NVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYH--- 128
+ N T + G + PG+ T + + G ++YH
Sbjct: 77 RLINPDTN----TLLHNIDFHAATGALGGGALTQVNPGEETTLRFKA-TKPGVFVYHCAP 131
Query: 129 -PSTGFHRAAGGFGGLCIHSR 148
+H +G G + + R
Sbjct: 132 EGMVPWHVTSGMNGAIMVLPR 152
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 64.1 bits (155), Expect = 1e-12
Identities = 27/155 (17%), Positives = 39/155 (25%), Gaps = 30/155 (19%)
Query: 22 VEAGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPF 81
+ T + P + NG FPGP I N+N+ + N L
Sbjct: 20 QSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTH 79
Query: 82 LLTWPGIQHKKN----------------------SWQDGVLG-TNCPIPPG---KNYTYY 115
L H + S + G K Y+
Sbjct: 80 FLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYH 139
Query: 116 LQVKDQIGSYIYHP----STGFHRAAGGFGGLCIH 146
+ + YH T + AG G IH
Sbjct: 140 YPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIH 174
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 62.8 bits (152), Expect = 3e-12
Identities = 25/170 (14%), Positives = 59/170 (34%), Gaps = 10/170 (5%)
Query: 159 VEDDFTLLIGDWYTRSHVEL-GKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLF 217
E D LLI D L P+ ++ G +GK +
Sbjct: 5 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGET-ILVNGKVWP---Y 60
Query: 218 TMKAGKVYKYRICNVGVKTSLNFRIQG-HTMKLVEMEGSHVVQN-EYESLDVHVGQCFTV 275
+ Y++R+ N + N + + +G + ++ + S + + + +
Sbjct: 61 LEVEPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDI 120
Query: 276 LVTANQDPKDYYLIASTRFTRTVI---TTTAIVRYSDSKGLASPDLPKAP 322
++ + ++A++ + T I+++ +K LA D + P
Sbjct: 121 IIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKP 170
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.7 bits (149), Expect = 1e-11
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 18/111 (16%)
Query: 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQD-------GVLGTNCPIPP 108
F GP I + T D + +++ N P+ GI + K + + P
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYP 132
Query: 109 GKNYTYYLQVKDQI---------GSYIYHP--STGFHRAAGGFGGLCIHSR 148
G+ YTY L ++ + IYH A+G G L I +
Sbjct: 133 GEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKK 183
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.2 bits (148), Expect = 1e-11
Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 18/111 (16%)
Query: 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKN-------SWQDGVLGTNCPIPP 108
GP + + D + ++ NK +P + GI++ K + + + P
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 109 GKNYTYYLQVKDQI---------GSYIYHPSTGF--HRAAGGFGGLCIHSR 148
G+ YTY + + ++IY+ +G G L I +
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 60.3 bits (145), Expect = 5e-11
Identities = 30/196 (15%), Positives = 50/196 (25%), Gaps = 26/196 (13%)
Query: 373 NGKVRFAVNGVSY-VNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDAT 431
+ VNG V+ P+ G N++ D+ +
Sbjct: 25 TPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLI-------- 76
Query: 432 YKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRK----------SYNLIDAV 481
E E + L G+ F +G P +++ N +
Sbjct: 77 -----ENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPP 131
Query: 482 SRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPD 541
R T + W + DN G W +I G + R LR + D
Sbjct: 132 RRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLER--PADLRQRISQED 189
Query: 542 NALLCGIVANMSKPTP 557
+ P
Sbjct: 190 EDDFNRVCDEWRAYWP 205
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 56.4 bits (135), Expect = 4e-10
Identities = 21/139 (15%), Positives = 39/139 (28%), Gaps = 9/139 (6%)
Query: 15 AAATSGLVEAGSPTFFFTWNVTYGTISPL--GIPQQGILINGQFPGPNINSTTNDNLVIN 72
A + T ++ + + + G P ++ + P + + +
Sbjct: 15 AMLEKDTGKVSGDTVTYSGKTVHVVAAAVLPGFPFPSFEVHDK-KNPTLEIPAGATVDVT 73
Query: 73 VFNKLD---EPFLLTWPGIQHKKNSWQD---GVLGTNCPIPPGKNYTYYLQVKDQIGSYI 126
N F +T G + D G + GK G+Y
Sbjct: 74 FINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNFTWHPTAGTYY 133
Query: 127 YHPSTGFHRAAGGFGGLCI 145
Y H A G FG + +
Sbjct: 134 YVCQIPGHAATGQFGKIVV 152
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.6 bits (136), Expect = 8e-10
Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 22/118 (18%)
Query: 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNS-----------WQDGVLG 101
+ GP I + D + + NK P + G++ KN+ V
Sbjct: 80 HLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPP 139
Query: 102 TNCPIPPGKNYTYYLQVKDQIGS---------YIYHPSTGFHR--AAGGFGGLCIHSR 148
+ + P + +TY V ++G +Y+ + + G G + I +
Sbjct: 140 SASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKK 197
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 54.8 bits (131), Expect = 1e-09
Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 11/141 (7%)
Query: 14 LAAATSGLVEAGSPTFFFTWNVTYGTISPL-GIPQQGILINGQFPGPNINSTTNDNLVIN 72
A A + +G F + + Q + +G PGP + D + +
Sbjct: 16 FAHAHEQVAASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELT 75
Query: 73 VFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132
+ N + T P + G I PG+ + + G+++YH + G
Sbjct: 76 LINPPEN----TMPHNIDFHAATGALGGGGLTLINPGEKVVLRFKA-TRAGAFVYHCAPG 130
Query: 133 -----FHRAAGGFGGLCIHSR 148
+H +G G + + R
Sbjct: 131 GPMIPWHVVSGMAGCIMVLPR 151
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.7 bits (126), Expect = 1e-08
Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 19/104 (18%)
Query: 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYY 115
GP +++ D + I N P+ + G+Q + ++ P PG+ TY
Sbjct: 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESSTV--------TPTLPGETLTYV 134
Query: 116 LQVKDQIGS---------YIYHPSTGFHR--AAGGFGGLCIHSR 148
++ ++ G+ + Y+ + + +G G L + R
Sbjct: 135 WKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRR 178
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (110), Expect = 7e-07
Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 4/90 (4%)
Query: 52 INGQFPG--PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN-CPIPP 108
ING+ G + D + + +E L T H GV ++ I P
Sbjct: 51 INGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDIFP 110
Query: 109 GKNYTYYLQVKDQIGSYIYHPSTGFHRAAG 138
G T + G ++ H H AG
Sbjct: 111 GTYQTLEMFP-RTPGIWLLHCHVTDHIHAG 139
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.8 bits (105), Expect = 3e-06
Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 8/117 (6%)
Query: 28 TFFFTWNVTYGTISPLGIPQQ---GILINGQ-FPGPNINSTTNDNLVINVFN--KLDEPF 81
++++ T + ING + P + + + +++ N +
Sbjct: 17 SWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIH 76
Query: 82 LLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAG 138
++ + G +N Q LG P+ PG T ++ + G ++ G + AG
Sbjct: 77 VVHFHGQTLLENGTQQHQLGV-WPLLPGSFKTLEMK-ASKPGWWLLDTEVGEIQRAG 131
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (104), Expect = 4e-06
Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 18/122 (14%)
Query: 30 FFTWNVTYGTISPLGIPQQG---------ILINGQFPG--PNINSTTNDNLVINVFN--K 76
N+ T +P + ++ +NG G P + D++V +F+
Sbjct: 19 LLEDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGN 78
Query: 77 LDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRA 136
+ + + G + + + P + T ++ D G++ T H
Sbjct: 79 EADVHGIYFSGNTYLWRGERRDT----ANLFPQTSLTLHMW-PDTEGTFNVECLTTDHYT 133
Query: 137 AG 138
G
Sbjct: 134 GG 135
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 44.0 bits (103), Expect = 1e-05
Identities = 33/174 (18%), Positives = 50/174 (28%), Gaps = 25/174 (14%)
Query: 377 RFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFM 436
RF +NG +Y + P G S +V P +
Sbjct: 36 RFTINGTAYESPSVPTLLQIMSGAQ---------SANDLLPAGSVYELPR-----NQVVE 81
Query: 437 EIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPN-CWAA 495
+V + L G+AF V + YN ++ V R + +
Sbjct: 82 LVVPAGVLGGPHPFHLHGHAFSVVRSAGSST-------YNFVNPVKRDVVSLGVTGDEVT 134
Query: 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNAL-LCGI 548
I DN G W +I G + + + D N P LC I
Sbjct: 135 IRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLCEI 186
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 41.4 bits (96), Expect = 8e-05
Identities = 24/171 (14%), Positives = 45/171 (26%), Gaps = 27/171 (15%)
Query: 358 PINRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADE 417
+ + L + F +NG ++ P+ G
Sbjct: 21 GADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSG---------------VTN 63
Query: 418 IENVTLQPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNL 477
++ V+ +EI + N G+ F V + YN
Sbjct: 64 PNDLLPGGAVISLPANQVIEISIPGGGNHPFHL--HGHNFDVVRTPGSSV-------YNY 114
Query: 478 IDAVSRYTIQVFPN-CWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527
++ V R + + DN G W L +I G + +
Sbjct: 115 VNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAED 165
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (93), Expect = 1e-04
Identities = 16/124 (12%), Positives = 34/124 (27%), Gaps = 14/124 (11%)
Query: 29 FFFTWNVTYGTISPLGIPQQ---------GILINGQFPG--PNINSTTNDNLVINVFNKL 77
++ N+ P + + +NG G P ++ D + +F
Sbjct: 19 WYLEDNIKTYCSEPEKVDKDNEDFQESNRMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMG 78
Query: 78 DEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137
+E + H + + P + Y+ G ++ H A
Sbjct: 79 NEVDVHAA--FFHGQALTNKNYRIDTINLFPATLFDAYMV-AQNPGEWMLSCQNLNHLKA 135
Query: 138 GGFG 141
G
Sbjct: 136 GLQA 139
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 37.5 bits (86), Expect = 0.002
Identities = 26/136 (19%), Positives = 38/136 (27%), Gaps = 28/136 (20%)
Query: 377 RFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFM 436
F +N S+ P+ G A +++ +V + +
Sbjct: 36 NFFINNASFTPPTVPVLLQILSG---------------AQTAQDLLPAGSVYPLPAHSTI 80
Query: 437 EIVLENRQNTMQ---SWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSR---YTIQVFP 490
EI L + L G+AF V T YN D + R T
Sbjct: 81 EITLPATALAPGAPHPFHLHGHAFAVVRSAGSTT-------YNYNDPIFRDVVSTGTPAA 133
Query: 491 NCWAAILVSMDNAGMW 506
I DN G W
Sbjct: 134 GDNVTIRFQTDNPGPW 149
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 35.8 bits (82), Expect = 0.002
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 52 INGQFPG--PNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPG 109
+NG G P+I +D++ ++ P L + + + Q+ + +
Sbjct: 26 VNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSI--HFNGQVLEQNHHKISAITLVSA 83
Query: 110 KNYTYYLQVKDQIGSYIYHPSTGFHRAAG 138
+ T + G + H AG
Sbjct: 84 TSTTANMT-VSPEGRWTIASLIPRHFQAG 111
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 561 | |||
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 100.0 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.98 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.97 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.96 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.96 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.96 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.96 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.96 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.95 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.94 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.92 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.87 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.86 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.86 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.85 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.85 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.84 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.83 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.81 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.68 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.66 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.65 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.65 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.65 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.64 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.61 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.59 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.56 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.54 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.46 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.4 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.34 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.19 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.19 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 99.19 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.15 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.14 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.12 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.11 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.1 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.96 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.95 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.94 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.9 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.9 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.87 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.81 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.78 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.74 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.65 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.6 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.57 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 98.52 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.48 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.46 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.45 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.39 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.35 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.35 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 98.32 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.31 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 98.28 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 98.27 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 98.22 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.22 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 98.17 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 98.16 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 98.12 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 98.06 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.06 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 98.05 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 98.0 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.95 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.91 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 97.91 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.9 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 97.89 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 97.88 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 97.88 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 97.84 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.72 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.7 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.62 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.61 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.61 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.59 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.52 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 97.5 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.09 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.06 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 96.94 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.83 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.81 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 96.75 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 96.67 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 96.58 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 96.33 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 95.71 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 95.64 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 95.6 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 95.6 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 95.48 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 95.47 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 95.46 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 94.89 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 94.42 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 94.39 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 94.35 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 94.34 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 94.29 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 94.12 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 93.87 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 91.83 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 88.56 | |
| d1w8oa1 | 103 | Sialidase, "linker" domain {Micromonospora viridif | 80.84 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=3.3e-40 Score=310.28 Aligned_cols=185 Identities=27% Similarity=0.473 Sum_probs=153.2
Q ss_pred cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCC--------CCCcccccccccceEEec
Q 046746 359 INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISD--------KPADEIENVTLQPNVMDA 430 (561)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~--------~p~~~~~~~~~~~~~~~~ 430 (561)
.++++.+..+....+|..+|+|||++|..|..|+|++.++.. .+.++.+.... .....+...+.+++++.+
T Consensus 5 ~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~~ 83 (214)
T d1aoza3 5 FNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNL-LHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQF 83 (214)
T ss_dssp CSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTC-TTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEE
T ss_pred CCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhcc-ccccccCCCcccccccccccCCCCCcccccCceeEEe
Confidence 578888866666678999999999999999999988776654 33333222110 001123556788999999
Q ss_pred CCCcEEEEEEEcCC------CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 431 TYKAFMEIVLENRQ------NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 431 ~~g~~ve~vl~N~~------~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
+.|++|||+|+|.+ ...||||||||+||||+++.|.+++.....+++.+|.+|||+.|++++|++|||++||||
T Consensus 84 ~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnpG 163 (214)
T d1aoza3 84 KIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPG 163 (214)
T ss_dssp CTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCE
T ss_pred cCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCCe
Confidence 99999999999965 346999999999999999999998877778999999999999999999999999999999
Q ss_pred eeeeecccchhhhccceEEEEEecCCcccccccCCCCccccccCc
Q 046746 505 MWNLRSNIWERNYLGQQLYLSVRLHKRSLRDEYNMPDNALLCGIV 549 (561)
Q Consensus 505 ~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~ 549 (561)
.|+||||+++|++.|||++|.|... +..++|++++.||..
T Consensus 164 ~w~~HCH~~~H~~~GM~~~~~v~~~-----~~~~~P~~~~~cg~~ 203 (214)
T d1aoza3 164 VWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGT 203 (214)
T ss_dssp EEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHH
T ss_pred eEEEEECcHHHHhCcCcEEEEEccc-----cccCCCccccccccc
Confidence 9999999999999999999988632 366789999999854
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=2.5e-39 Score=281.63 Aligned_cols=124 Identities=23% Similarity=0.419 Sum_probs=116.9
Q ss_pred CeEEEEEEEEEEEecCCCe-eeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-----CCeeeeeCCccCCCCCCCCCCC
Q 046746 27 PTFFFTWNVTYGTISPLGI-PQQGILINGQFPGPNINSTTNDNLVINVFNKLD-----EPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 27 ~~~~~~l~~~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
.|++|+|++++..+++||. .+.+++|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++++||++
T Consensus 1 a~v~~~l~~~~~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~ 80 (136)
T d1v10a1 1 ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 80 (136)
T ss_dssp CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB
T ss_pred CEEEEEEEEEEEEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCC
Confidence 3689999999999999985 678999999999999999999999999999975 7899999999999999999999
Q ss_pred cc-CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCC
Q 046746 101 GT-NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 101 ~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (561)
++ ||+|.||++|+|+|++++++||||||||.+.|+.+||+|+|||+++++
T Consensus 81 ~~t~~~I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d 131 (136)
T d1v10a1 81 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND 131 (136)
T ss_dssp TTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred ccccceECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCcc
Confidence 87 999999999999999887899999999999999999999999998654
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=3.2e-37 Score=267.92 Aligned_cols=125 Identities=34% Similarity=0.688 Sum_probs=118.3
Q ss_pred CCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 26 SPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
+.+|+|+|+++++...|||.++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++++|||||+++...+++||++++ |
T Consensus 1 ~~~~~~~~~v~~~~~~pdg~~~~~~~~NG~~PGP~i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~~~~ 80 (129)
T d1aoza1 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (129)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CcEEEEEEEEEEEEECCCCeEEEEEEECCCcCCCeEEEECCcEEEEEEEeCCCCCCeeeeeccceeeccCcccccccccc
Confidence 46899999999999999999999999999999999999999999999999984 799999999999999999999887 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCCC
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSVV 151 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~ 151 (561)
|+|.||++++|+|++ +++||||||||...|+.+||+|+|||++++++
T Consensus 81 ~~I~PG~s~~y~f~a-~~~Gt~~YH~H~~~h~~~Gm~G~~iV~~~~~~ 127 (129)
T d1aoza1 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGK 127 (129)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTC
T ss_pred ceECCCCEEEEEEEC-CCCCceEEecCCHHHHhCCCEEEEEEcCCCCC
Confidence 999999999999996 67999999999999999999999999997653
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=2.9e-37 Score=267.07 Aligned_cols=120 Identities=34% Similarity=0.661 Sum_probs=113.4
Q ss_pred EEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-----CCeeeeeCCccCCCCCCCCCCCcc-
Q 046746 29 FFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-----EPFLLTWPGIQHKKNSWQDGVLGT- 102 (561)
Q Consensus 29 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~- 102 (561)
..++|+++.+.+++||+.+.+++||| +|||+|++++||+|+|+|+|+|+ ++++|||||+++...+++||++++
T Consensus 5 ~~~tlti~~~~i~pdG~~~~~~~~nG-~pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g~~ 83 (131)
T d1hfua1 5 SVDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (131)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETT-BSSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ccEEEEEEeEEEcCCCeEeeEEEECC-cCCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCcccc
Confidence 46789999999999999999999999 79999999999999999999996 468999999999999999999988
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCC
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 149 (561)
||+|.||++|+|+|++++++||||||||...|+.+||+|+|||++++
T Consensus 84 ~~~I~PG~~~~y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred cceECCCCeEEEEEeCCCCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 99999999999999988889999999999999999999999999964
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=5.4e-37 Score=265.49 Aligned_cols=119 Identities=28% Similarity=0.554 Sum_probs=114.0
Q ss_pred EEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-----CCeeeeeCCccCCCCCCCCCCCcc-C
Q 046746 30 FFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLD-----EPFLLTWPGIQHKKNSWQDGVLGT-N 103 (561)
Q Consensus 30 ~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (561)
.|+|+++++++++||..+.+|+|||++|||+|++++||+|+|+|+|.++ +++++||||+++.+++++||+++. |
T Consensus 5 ~~~l~v~~~~i~p~G~~~~~~~~ng~~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~~~s~ 84 (130)
T d1gyca1 5 AASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQ 84 (130)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCEEEEEEEECCcccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCcccccc
Confidence 6899999999999999999999999999999999999999999999975 678999999999999999999987 9
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecC
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSR 148 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 148 (561)
|+|.||++|+|+|++++++||||||||...|+.+||+|+|||+++
T Consensus 85 ~~i~PG~s~~Y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p 129 (130)
T d1gyca1 85 CPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129 (130)
T ss_dssp CCBCTTEEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CCCCCCCeEEEEEECCCCCceeEEecCCHHHHhCCCEEEEEEeCC
Confidence 999999999999998788999999999999999999999999985
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.2e-35 Score=255.16 Aligned_cols=122 Identities=21% Similarity=0.317 Sum_probs=112.5
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccC
Q 046746 24 AGSPTFFFTWNVTYGTISPLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (561)
+.+..++|+|+++++...++|....+|+|||++|||+|++++||+|+|+++|+|+++++|||||+++. +.+||++ +
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~--~ 86 (140)
T d1kv7a1 11 TTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--Q 86 (140)
T ss_dssp CCCTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--T
T ss_pred cCCCceEEEEEEEEEEEecCCEEEEEEEECCccCCceEEEECCCEEEEEEEeCccccccEeeeeeecC--CccCCCc--c
Confidence 34567899999999999999999999999999999999999999999999999999999999999874 5799987 7
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCC
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~ 149 (561)
++|.||++++|+|++++++||||||||.+ .|+++||+|+|||++++
T Consensus 87 ~~i~pg~~~~y~~~~~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 87 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp CCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred ceEccCCceeEEEEEecCCeeEEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 99999999999999876789999999974 78999999999999854
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=1.8e-34 Score=268.95 Aligned_cols=172 Identities=20% Similarity=0.292 Sum_probs=131.6
Q ss_pred cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEE
Q 046746 359 INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEI 438 (561)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~ 438 (561)
++.++.|...+ .+ .+|+|||++|..+..|.|.....+. ... ...+.+..++.++.+++++|
T Consensus 22 aD~~~~~~~~~---~~-~~wtINg~s~~~~~~p~l~~~~~~~----~~~-----------~~~~~~~~v~~~~~~~~~~~ 82 (200)
T d1hfua3 22 ADVNLRFQLGF---SG-GRFTINGTAYESPSVPTLLQIMSGA----QSA-----------NDLLPAGSVYELPRNQVVEL 82 (200)
T ss_dssp SSEEEECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHTTC----CSG-----------GGSSSTTSEEEECSSCEEEE
T ss_pred CcEEEEEeEee---cc-cEEEECCEeccCCCCChhhhhhcCC----cCc-----------ccccccCceEEecCCcceEE
Confidence 45555554432 12 2599999999988888776544321 110 12345678899999999999
Q ss_pred EEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCC-CcEEEEEEEeCCcceeeeecccchhh
Q 046746 439 VLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFP-NCWAAILVSMDNAGMWNLRSNIWERN 516 (561)
Q Consensus 439 vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~-~g~~~irf~adnpG~w~~HCHil~H~ 516 (561)
++.|.. .+.||||||||+|+||+++.+. .+++.+|.||||+.|++ |+|++|||++||||.|+|||||++|+
T Consensus 83 v~~~~~~~~~Hp~HlHg~~F~vl~~~g~~-------~~~~~~~~~rDtv~v~~~G~~~~ir~~adnpG~w~~HCHi~~H~ 155 (200)
T d1hfua3 83 VVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHL 155 (200)
T ss_dssp EEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHH
T ss_pred EEeeccccccCceeecCCcEEEEeccCCC-------CCccccCcccceEEeCCCCEEEEEEEECCCCeeeEEEeCCChHH
Confidence 998876 5789999999999999997543 26778899999999975 67999999999999999999999999
Q ss_pred hccceEEEEEecCCcccccccCCCCc-cccccCccCCCCCCCC
Q 046746 517 YLGQQLYLSVRLHKRSLRDEYNMPDN-ALLCGIVANMSKPTPY 558 (561)
Q Consensus 517 d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~~~~~~~~~ 558 (561)
+.|||++|.+..++. .+...+|.+ .+.|+.+..+++-++|
T Consensus 156 ~~GM~~~~~~~~~~~--~~~~~~p~~~~~~C~~~~~~~~~~~~ 196 (200)
T d1hfua3 156 MNGLAIVFAEDMANT--VDANNPPVEWAQLCEIYDDLPPEATS 196 (200)
T ss_dssp HTTCEEEEEECHHHH--HHHCCCCHHHHHHHHHHHTCCHHHHC
T ss_pred hCCCcEEEEEcCCCc--ccccCCChhhhcccccccccCCCCce
Confidence 999999998765532 234556666 5689999888654444
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=2.6e-33 Score=252.39 Aligned_cols=125 Identities=30% Similarity=0.523 Sum_probs=112.7
Q ss_pred CCCeEEEEEEEEEEE--ecCCCee-eeEEEECCcCCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCC
Q 046746 25 GSPTFFFTWNVTYGT--ISPLGIP-QQGILINGQFPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVL 100 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~--~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~ 100 (561)
.+.+|+|+|++++.. +++||.. +.+|+|||++|||+|++++||+|+|+|+|+++ ..++|||||+++.+.+++||++
T Consensus 30 tg~~~~y~l~~~~~~~~~~pdG~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~~ 109 (162)
T d2q9oa1 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGAN 109 (162)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEEEeeECCCCCcceeEEEECCcccCCeEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCCc
Confidence 346899999999865 5789855 57999999999999999999999999999995 7899999999999999999998
Q ss_pred cc-CCcc-CCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEecCCC
Q 046746 101 GT-NCPI-PPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 101 ~~-q~~i-~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (561)
+. ||+| +||++++|+|.+ +++||||||||.+.|+.+||+|+|||++++.
T Consensus 110 ~~~~~~i~~pg~~~~y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~~iV~~p~~ 160 (162)
T d2q9oa1 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS 160 (162)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred ccccceecCCCCEEEeeecC-CCCEEEEeecCCHHHHhCCCEEEEEECCCCC
Confidence 87 8887 568999999985 7899999999999999999999999998753
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=2e-33 Score=261.87 Aligned_cols=167 Identities=22% Similarity=0.311 Sum_probs=127.5
Q ss_pred cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEE
Q 046746 359 INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEI 438 (561)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~ 438 (561)
.+.++.+..++ ++ .+|+|||++|..+..|+|+....+. ... ...+.+.+++.++.++++++
T Consensus 22 ~d~~~~l~~~~---~~-~~~~iNg~sf~~p~~p~l~~~~~~~-~~~--------------~~~~~~~~v~~~~~~~~~ei 82 (199)
T d1gyca3 22 VDKALNLAFNF---NG-TNFFINNASFTPPTVPVLLQILSGA-QTA--------------QDLLPAGSVYPLPAHSTIEI 82 (199)
T ss_dssp SSEEEECCEEE---CS-SCEEETTBCCCCCSSCHHHHHHTTC-CST--------------TTSSSTTSEEEECTTCEEEE
T ss_pred ccEEEEEEEec---cc-ceEEECCEecCCCCcchHHHHhcCC-CCc--------------ccccccCceEEeccCceeEE
Confidence 45555555432 22 3599999999999888876543321 000 12346678899999999999
Q ss_pred EEEcCC---CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEe---CCCcEEEEEEEeCCcceeeeeccc
Q 046746 439 VLENRQ---NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQV---FPNCWAAILVSMDNAGMWNLRSNI 512 (561)
Q Consensus 439 vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~v---p~~g~~~irf~adnpG~w~~HCHi 512 (561)
++.|.. ...||||||||+|+||+++.+. .+++.+|.+|||+.+ ++++|++|||+|||||.|+|||||
T Consensus 83 v~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~-------~~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~w~~HCHi 155 (199)
T d1gyca3 83 TLPATALAPGAPHPFHLHGHAFAVVRSAGST-------TYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHI 155 (199)
T ss_dssp EEECCTTSCSCSCEEEETTCCEEEEECTTCC-------CCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESS
T ss_pred EeecccccCCCceeeeecCCcEEEEeecCCC-------ccCccCcccccceeeeccCCCcEEEEEEECCCCeeEEEEcCc
Confidence 999754 5679999999999999997653 257788999999887 799999999999999999999999
Q ss_pred chhhhccceEEEEEecCCcccccccCCCCccc-cccCccCCC
Q 046746 513 WERNYLGQQLYLSVRLHKRSLRDEYNMPDNAL-LCGIVANMS 553 (561)
Q Consensus 513 l~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~-~c~~~~~~~ 553 (561)
++|++.|||++|.+... + ..+..++|+.+. .|+.+...+
T Consensus 156 ~~H~~~GM~~~~~~~~~-~-~~~~~~~p~~~~~~C~~~~~~~ 195 (199)
T d1gyca3 156 DFHLEAGFAIVFAEDVA-D-VKAANPVPKAWSDLCPIYDGLS 195 (199)
T ss_dssp HHHHHTTCEEEEEETHH-H-HHHHCCCCHHHHHHHHHHHTCC
T ss_pred hhhHhccCcEEEEEcCC-c-ccccCCCCHHHHhhhhhhcccC
Confidence 99999999999855433 2 334566777766 798886543
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.98 E-value=7.7e-33 Score=257.09 Aligned_cols=163 Identities=17% Similarity=0.253 Sum_probs=121.5
Q ss_pred cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEE
Q 046746 359 INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEI 438 (561)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~ 438 (561)
++.++.+.... ..+...|+|||++|.+++.|+|...+.+. .. +. .....+.++.+..++++++
T Consensus 22 ~d~~~~~~~~~--~~~~~~~~iNg~~f~~~~~p~l~~~~~g~----~~-------~~----~~~~~~~~~~~~~~~~~~i 84 (190)
T d1v10a3 22 ADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQILSGV----TN-------PN----DLLPGGAVISLPANQVIEI 84 (190)
T ss_dssp SSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHHTC----CC-------GG----GSSSTTTEEEECTTCEEEE
T ss_pred CCEEEEEEEEe--cCCEeEEEECCEecCCCCCchHHHhhcCC----cc-------cc----cccccceeEEccCccEEEE
Confidence 55666555432 12345699999999988899876554321 00 00 1224566788999999998
Q ss_pred EEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCc-EEEEEEEeCCcceeeeecccchhhh
Q 046746 439 VLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNC-WAAILVSMDNAGMWNLRSNIWERNY 517 (561)
Q Consensus 439 vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g-~~~irf~adnpG~w~~HCHil~H~d 517 (561)
++.| ...||||||||+|+||+++.+. .+++.+|.||||+.|+++| |++|||++||||.|+|||||++|++
T Consensus 85 ~~~~--~~~HP~HlHG~~F~Vl~~~~~~-------~~~~~~~~~rDTv~v~~~g~~~~irf~adnpG~w~~HCHi~~H~~ 155 (190)
T d1v10a3 85 SIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLE 155 (190)
T ss_dssp EEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHT
T ss_pred Eecc--CccccccccCceEEEEEcCCCc-------ccccccCcccCEEEeCCCeEEEEEEEEcCCCeeEEEecCchhhhh
Confidence 7777 5789999999999999986432 2567889999999999875 8889999999999999999999999
Q ss_pred ccceEEEEEecCCcccccccCC-CCccccccCc
Q 046746 518 LGQQLYLSVRLHKRSLRDEYNM-PDNALLCGIV 549 (561)
Q Consensus 518 ~GMm~~~~V~~~~~~~~~~~~~-p~~~~~c~~~ 549 (561)
.|||++|.+..++ ..+.+.+ |+....|...
T Consensus 156 ~GM~~~~~~~~~~--~~~~~~~~~~~~~~c~~~ 186 (190)
T d1v10a3 156 AGLAVVFAEDIPN--IPIANAISPAWDDLCPKY 186 (190)
T ss_dssp TTCEEEEEESGGG--HHHHSCCCHHHHTHHHHH
T ss_pred CCCcEEEEECCCC--CCccCCCCHHHHhhhhhc
Confidence 9999999886543 2223443 4445678654
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=5.8e-32 Score=241.58 Aligned_cols=132 Identities=14% Similarity=0.026 Sum_probs=102.9
Q ss_pred cceEEEEccceeccCCeEEEEEcCeeccCCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCcEEEE
Q 046746 359 INRTIRLANTAHLVNGKVRFAVNGVSYVNSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKAFMEI 438 (561)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~ve~ 438 (561)
..|++.+...+ ...|...|.|||++|.++ .. ..++.|++++|
T Consensus 12 ~~r~~~l~~~~-~~~g~~~~~ing~~~~~~---~~----------------------------------~~~~~G~~e~W 53 (154)
T d1gska3 12 NIRTLKLAGTQ-DEYGRPVLLLNNKRWHDP---VT----------------------------------ETPKVGTTEIW 53 (154)
T ss_dssp EEEEEEEEEEE-CTTSCEEEEETTBCTTSC---CC----------------------------------BCCBTTCEEEE
T ss_pred eEEEEEEcccc-cccCCceEEECCcCcCCC---cc----------------------------------cccCCCCEEEE
Confidence 44566665433 234555699999998533 10 12578999999
Q ss_pred EEEcCCCCCCceeecCCceEEEeecCCCCCcC----------CCCCCCCCCCCceeEEEeCCCcEEEEEEE-eCCcceee
Q 046746 439 VLENRQNTMQSWILDGYAFFAVGMEPGTWNPD----------KRKSYNLIDAVSRYTIQVFPNCWAAILVS-MDNAGMWN 507 (561)
Q Consensus 439 vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~----------~~~~~n~~~P~~rDTv~vp~~g~~~irf~-adnpG~w~ 507 (561)
.|.|.+.+.|||||||++||||+++.+.+... ........++.||||+.|+|+++++|||+ +||||.|+
T Consensus 54 ~i~N~~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~ 133 (154)
T d1gska3 54 SIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYV 133 (154)
T ss_dssp EEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEE
T ss_pred EEEeCCCCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceE
Confidence 99999999999999999999999975432110 01123455678999999999999999998 69999999
Q ss_pred eecccchhhhccceEEEEEec
Q 046746 508 LRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 508 ~HCHil~H~d~GMm~~~~V~~ 528 (561)
|||||++|||.|||+.++|.+
T Consensus 134 ~HCHil~Hed~GMM~~~~V~e 154 (154)
T d1gska3 134 WHCHILEHEDYDMMRPMDITD 154 (154)
T ss_dssp EEESCHHHHTTTCEEEEEEBC
T ss_pred EecCcchHhhCcCceEEEEeC
Confidence 999999999999999999964
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=3.7e-32 Score=256.47 Aligned_cols=158 Identities=17% Similarity=0.187 Sum_probs=112.9
Q ss_pred eEEEEEcCeecc-CCCCchhhhhhcCCCCcccccCCCCCCCCcccccccccceEEecCCCc-EEEEEEEc----CCCCCC
Q 046746 375 KVRFAVNGVSYV-NSETPLKFAEYYGIPEEVFKYNVISDKPADEIENVTLQPNVMDATYKA-FMEIVLEN----RQNTMQ 448 (561)
Q Consensus 375 ~~~~~iNg~~f~-~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~-~ve~vl~N----~~~~~H 448 (561)
..+|+|||++|. ++..|+|...+.+. .. .....+++.++... +..+++++ .....|
T Consensus 27 ~~~w~iNg~s~~~d~~~P~L~~~~~~~----------~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~n~~~~~H 88 (216)
T d2q9oa3 27 LFVWKVNGSDINVDWGKPIIDYILTGN----------TS--------YPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPH 88 (216)
T ss_dssp SCEEEETTBCCCCCTTSCHHHHHHHTC----------CC--------CCGGGCEEEECCSSCEEEEEEEECTTSSCCCCE
T ss_pred EEEEEECCEecccCCCCCChhhhhcCC----------cc--------cccccceeeccccccceeEEEEeccCCcccccc
Confidence 367999999985 56788775443211 00 11223345555543 43344443 336689
Q ss_pred ceeecCCceEEEeecCCCCCcCC----------CCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceeeeecccchhhhc
Q 046746 449 SWILDGYAFFAVGMEPGTWNPDK----------RKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWNLRSNIWERNYL 518 (561)
Q Consensus 449 P~HlHG~~F~Vl~~~~g~~~~~~----------~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~ 518 (561)
|||||||+||||+++.+.+.... ...+|+.+|.||||+.|+++||++|||++||||.|+|||||++|++.
T Consensus 89 P~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~adnpG~Wl~HCHi~~H~~~ 168 (216)
T d2q9oa3 89 PMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSG 168 (216)
T ss_dssp EEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHT
T ss_pred ceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEECCCCeEEEEEccCCccccc
Confidence 99999999999999987665432 23578999999999999999999999999999999999999999999
Q ss_pred cceEEEEEecCCcccccc--cCCC-CccccccCccCC
Q 046746 519 GQQLYLSVRLHKRSLRDE--YNMP-DNALLCGIVANM 552 (561)
Q Consensus 519 GMm~~~~V~~~~~~~~~~--~~~p-~~~~~c~~~~~~ 552 (561)
|||++| |+.+++ +.+. ..+| +..+.|+.++.-
T Consensus 169 GM~~~~-~~~p~~-~~~~~~~~~~~~~~~~C~~w~~~ 203 (216)
T d2q9oa3 169 GLSVDF-LERPAD-LRQRISQEDEDDFNRVCDEWRAY 203 (216)
T ss_dssp TCEEEE-EECHHH-HGGGCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEE-EEcchh-hhhcccCCCchhhhccChhhccc
Confidence 999999 555543 2222 1234 346899876654
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=1.3e-30 Score=234.94 Aligned_cols=148 Identities=27% Similarity=0.453 Sum_probs=122.9
Q ss_pred CCCceEEEecceeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceE
Q 046746 159 VEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSL 238 (561)
Q Consensus 159 ~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~ 238 (561)
+|.|.+|+|+||+++....+.. +.+...+.+++++|||++. +.|.......+.++|++|++|||||||+|+...+
T Consensus 4 Dd~e~vi~lsDW~h~~~~~l~~--~~~~~~~~pd~~liNGkg~---~~~~~~~~~~~~~~v~~g~~~rlRlina~~~~~~ 78 (168)
T d1v10a2 4 DDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGR---NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNY 78 (168)
T ss_dssp CSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCC---CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred CCCccEEEEEECCCCCHHHHHh--ccCCCCCCCceeeecCCCC---cCCCCcCCCceEEEECCCCEEEEEEEecccCceE
Confidence 4678999999999987665532 2344567899999999997 4444344456899999999999999999999999
Q ss_pred EEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC---cceeEEEEEecCCC
Q 046746 239 NFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT---VITTTAIVRYSDSK 311 (561)
Q Consensus 239 ~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~ 311 (561)
.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|++++++|+||||+.+....+ .....|||+|.|+.
T Consensus 79 ~~~id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~aiL~Y~g~~ 154 (168)
T d1v10a2 79 AFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAA 154 (168)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCC
T ss_pred EEEECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCCCCCcEEEEEEeccCCCcCCCCceEEEEEECCCC
Confidence 99999999999999999999999999999999999999999988999999998765433 34468999998864
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=9.5e-31 Score=234.33 Aligned_cols=120 Identities=20% Similarity=0.344 Sum_probs=100.2
Q ss_pred CCeEEEEEEEEEEEecCC--CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-
Q 046746 26 SPTFFFTWNVTYGTISPL--GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT- 102 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~~d--G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~- 102 (561)
...++|+|++++..+.++ |+...+|+|||++|||+|++++||+|+|+|+|.++ ++||||+++.+. ++++.+.
T Consensus 30 ~~~~~~~lt~~~~~~~~~~~g~~~~~~t~NG~~PGPtI~v~~Gd~v~v~~~N~~~---~~h~h~ih~hg~--~~~~~g~~ 104 (159)
T d1oe2a1 30 PKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVEFHGA--TGALGGAK 104 (159)
T ss_dssp CCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTS--CSGGGGGG
T ss_pred CeEEEEEEEEEEEEEEECCCCcEEEEEEECCcCCCCeEEEECCcEEEEEEECCCc---cccccceeeccc--cCCCCCcc
Confidence 357899999999998876 88999999999999999999999999999999985 344444444332 4555444
Q ss_pred CCccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCCCC
Q 046746 103 NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRSVV 151 (561)
Q Consensus 103 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~ 151 (561)
+++|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||+++++.
T Consensus 105 ~~~I~PG~t~ty~f~a-~~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~e~~ 156 (159)
T d1oe2a1 105 LTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGL 156 (159)
T ss_dssp GCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCC
T ss_pred cccCCCCCeEEEEEEc-CCCceEEEEeCCCCCchhHHhCCCEEEEEEECCCCC
Confidence 7899999999999996 6799999999954 6899999999999987653
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=1.6e-29 Score=230.24 Aligned_cols=147 Identities=24% Similarity=0.332 Sum_probs=123.0
Q ss_pred CCce-EEEecceeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceE
Q 046746 160 EDDF-TLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSL 238 (561)
Q Consensus 160 ~~e~-~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~ 238 (561)
|.|. +|+|+||+|+....+......+ ..+.++++||||++. +.|++ .+....+++++|++|||||||+|..+.+
T Consensus 2 D~D~~vi~lsDW~h~~~~~~~~~~~~~-~~p~~d~~LINGkg~---~~~~~-~~~~~~~~v~~g~~~rlR~iN~~~~~~~ 76 (181)
T d2q9oa2 2 DIDLGVFPITDYYYRAADDLVHFTQNN-APPFSDNVLINGTAV---NPNTG-EGQYANVTLTPGKRHRLRILNTSTENHF 76 (181)
T ss_dssp SEEEEEEEEEEECSSCHHHHHHHHTTS-CCCCBSEEEETTBCB---CTTTC-CBCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred CccCeeEEEEecCCCCHHHHHhhcccC-CCCCcceEEECCcCC---CCCCC-CCcceEEEECCCCEEEEEEecccCCccE
Confidence 5556 8999999998877665444333 345689999999996 44432 2345789999999999999999999999
Q ss_pred EEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccC-----CcceeEEEEEecCCC
Q 046746 239 NFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTR-----TVITTTAIVRYSDSK 311 (561)
Q Consensus 239 ~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~~~ 311 (561)
.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++++++|+||||+...... ......|||+|.++.
T Consensus 77 ~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~~Y~ir~~~~~~~~~~~~~~~~~~ail~Y~ga~ 154 (181)
T d2q9oa2 77 QVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP 154 (181)
T ss_dssp EEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC
T ss_pred EEEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCccEEEEEeccccccccCCCCCceEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999865322 245688999998865
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.96 E-value=3.8e-30 Score=230.07 Aligned_cols=119 Identities=20% Similarity=0.350 Sum_probs=102.9
Q ss_pred CCCeEEEEEEEEEEEec--CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc
Q 046746 25 GSPTFFFTWNVTYGTIS--PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT 102 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (561)
.+..++|+|++++.+.. .+|++..+|+|||++|||+|+|++||+|+|+|+|+ ..++||||+++.+. +|+.++.
T Consensus 28 ~~~~~~~~l~~~~~~~~i~~~G~~~~~~~~NG~~PGP~I~v~~GD~V~i~l~N~---~~~~~~Hg~~~h~~--~~~~~~~ 102 (157)
T d2bw4a1 28 GPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP---DTNTLLHNIDFHAA--TGALGGG 102 (157)
T ss_dssp SCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTS--CSGGGGG
T ss_pred CCeEEEEEEEEEEEEEEECCCCeEEEEEEECCccCCceEEEECCcEEEEEEEeC---CCCcceEeeeeccc--CCCcCCc
Confidence 34679999999988876 46999999999999999999999999999999996 55789999988765 4444443
Q ss_pred -CCccCCCCeEEEEEEecCceeeeeEecCc----hhhhccCceeEEEEecCC
Q 046746 103 -NCPIPPGKNYTYYLQVKDQIGSYIYHPST----GFHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 103 -q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~ 149 (561)
.++|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++
T Consensus 103 ~~~~i~PGet~ty~f~a-~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e 153 (157)
T d2bw4a1 103 ALTQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRD 153 (157)
T ss_dssp GGCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTB
T ss_pred ceeeECcCCEEeEEEEC-CCCccceEEECCCCchHHHHhCCCEEEEEEeCCC
Confidence 6789999999999996 789999999995 478999999999999864
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.96 E-value=2.5e-29 Score=227.57 Aligned_cols=146 Identities=25% Similarity=0.523 Sum_probs=122.2
Q ss_pred CCCCCCCCceEEEecceeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcC
Q 046746 154 PYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVG 233 (561)
Q Consensus 154 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~ 233 (561)
.|+. +|+|++|+|+||+++....+. ..+.++..+|||++. +.| +..+..+.++|++|++|||||||+|
T Consensus 5 ~YD~-dD~e~vl~l~DW~h~~~~~~~-------~~~~pd~~liNG~g~---~~~-~~~~~~~~~~v~~g~~~rlR~iN~~ 72 (172)
T d1hfua2 5 LYDE-DDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGR---YVG-GPAAELSIVNVEQGKKYRMRLISLS 72 (172)
T ss_dssp GCSB-CSTTSEEEEEEECSSCGGGCC----------CCSEEEETTBCC---BTT-CCCCCCCEEEECTTCEEEEEEEECC
T ss_pred cCCC-CCCeEEEEEEECCCCChHHhh-------ccCCCCcEEECccCc---cCC-CCCCCceEEEECCCCEEEEEEeeec
Confidence 4665 578999999999998765542 134679999999996 333 1224568999999999999999999
Q ss_pred CCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC-------cceeEEEEE
Q 046746 234 VKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT-------VITTTAIVR 306 (561)
Q Consensus 234 ~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-------~~~~~ail~ 306 (561)
+...+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|++++++|+|||++....... .....|+|+
T Consensus 73 ~~~~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~~~~~Y~ira~~~~~~~~~~~~~~~~~~~aiL~ 152 (172)
T d1hfua2 73 CDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILR 152 (172)
T ss_dssp SSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEE
T ss_pred CCceEEEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCCCCCcEEEEEEeccCcccccCcCCCceEEEEEE
Confidence 9999999999999999999999999999999999999999999999988999999998654322 345789999
Q ss_pred ecCCC
Q 046746 307 YSDSK 311 (561)
Q Consensus 307 y~~~~ 311 (561)
|.++.
T Consensus 153 Y~g~~ 157 (172)
T d1hfua2 153 YAGAA 157 (172)
T ss_dssp ETTSC
T ss_pred ECCCC
Confidence 99865
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=3.9e-30 Score=236.30 Aligned_cols=125 Identities=21% Similarity=0.203 Sum_probs=106.8
Q ss_pred cCCCeEEEEEEEEEEEec--CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCC----------------------
Q 046746 24 AGSPTFFFTWNVTYGTIS--PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDE---------------------- 79 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~---------------------- 79 (561)
..++.+.|+|++++...+ +++..+.+|+|||++|||+|+|++||+|+|+++|+|++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ynG~~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~ 99 (181)
T d1gska1 20 QSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEV 99 (181)
T ss_dssp ECSSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSC
T ss_pred cCCCceEEEEEEEEeEEEecCCCcceeEEEECCccCCCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCC
Confidence 355778999999988765 57888999999999999999999999999999999853
Q ss_pred CeeeeeCCccCCCCCCCCCCCcc------CCccCCCCeEEEEEEecCceeeeeEecCch----hhhccCceeEEEEecCC
Q 046746 80 PFLLTWPGIQHKKNSWQDGVLGT------NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG----FHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 80 ~~~iH~HG~~~~~~~~~DGv~~~------q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~ 149 (561)
.++|||||+++. +.+||.+.. .+++.+|++++|+|.+.+++||||||||.+ .|+++||+|+|||++++
T Consensus 100 ~t~iH~HG~~~~--~~~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~ 177 (181)
T d1gska1 100 KTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPK 177 (181)
T ss_dssp CBCEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGG
T ss_pred cceeeeeccccC--CccCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCcc
Confidence 589999999764 679998642 455667788899999766789999999975 79999999999999865
Q ss_pred C
Q 046746 150 V 150 (561)
Q Consensus 150 ~ 150 (561)
+
T Consensus 178 ~ 178 (181)
T d1gska1 178 E 178 (181)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.96 E-value=1.8e-28 Score=221.20 Aligned_cols=147 Identities=22% Similarity=0.435 Sum_probs=121.1
Q ss_pred CCCCCCCCceEEEecceeecchHHhhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcC
Q 046746 154 PYNRFVEDDFTLLIGDWYTRSHVELGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVG 233 (561)
Q Consensus 154 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~ 233 (561)
.|+. ++.|.+|+|+||+|+.... .......++..+|||++. +.|. ..+..+.++|++|++|||||||+|
T Consensus 6 ~YD~-D~ee~vi~lsDWyh~~~~~------~~~~~~~~d~~liNG~g~---~~~~-~~~~~~~~~v~~g~~~rlRlIN~~ 74 (170)
T d1gyca2 6 RYDV-DNESTVITLTDWYHTAARL------GPRFPLGADATLINGLGR---SAST-PTAALAVINVQHGKRYRFRLVSIS 74 (170)
T ss_dssp GCSB-CSGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCC---BTTC-TTSCCCEEEECTTCEEEEEEEECC
T ss_pred cCCC-CCCceEEEEeecCCChhhh------cccCCCcCCcccccCccc---cCCC-CCCCceEEEECCCCEEEEEEeecC
Confidence 4555 3467899999999975432 222345678999999986 3332 223468999999999999999999
Q ss_pred CCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCC---cceeEEEEEecCC
Q 046746 234 VKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRT---VITTTAIVRYSDS 310 (561)
Q Consensus 234 ~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~ 310 (561)
+.+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++++|+||||+.....+. .....|+|+|.++
T Consensus 75 ~~~~~~~~id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~aiL~Y~~a 154 (170)
T d1gyca2 75 CDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSAILRYQGA 154 (170)
T ss_dssp SSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTS
T ss_pred CCceeeEEeCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCCCCCcEEEEEeccccccccCCCeeEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999988999999998754432 3456899999876
Q ss_pred C
Q 046746 311 K 311 (561)
Q Consensus 311 ~ 311 (561)
.
T Consensus 155 ~ 155 (170)
T d1gyca2 155 P 155 (170)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.96 E-value=2.4e-29 Score=224.02 Aligned_cols=120 Identities=18% Similarity=0.292 Sum_probs=99.6
Q ss_pred CCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccC
Q 046746 25 GSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (561)
...+++|+|++++..+++ +|....+|+|||++|||+|++++||+|+|+|+|++. .+..||||++ +...+||... +
T Consensus 27 ~~~~~~~~l~~~~~~~~~~~g~~~~~~t~NG~~PGPti~v~~Gd~v~i~~~N~~~-~~~~H~~~~h--~~~~~~~~~~-~ 102 (153)
T d1mzya1 27 GPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPE-NTMPHNIDFH--AATGALGGGG-L 102 (153)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECTT-CCSCBCCEET--TSCSGGGGGG-G
T ss_pred CCeEEEEEEEEEEEEEEeCCCcEEEEEEECCCcCCCcEEEeCCCEEEEEEEcCCC-CceEccCccc--cCCcCCCCCc-c
Confidence 335789999999999986 588899999999999999999999999999999854 3445555553 3344555443 4
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCch-----hhhccCceeEEEEecCC
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTG-----FHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~ 149 (561)
.+|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++
T Consensus 103 ~~i~PG~t~ty~f~a-~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 103 TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp CCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred ccccCCCEEEEEEEc-CCCceEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 689999999999995 7899999999954 58899999999999875
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.96 E-value=4.9e-28 Score=228.69 Aligned_cols=150 Identities=25% Similarity=0.514 Sum_probs=124.4
Q ss_pred CCceEEEecceeecchHHhhhhhcCC--CCCCCCCeEEEcCccCCCCCCCC----------------CCCCCCceEEEEc
Q 046746 160 EDDFTLLIGDWYTRSHVELGKQLDSG--KLLGKPDGVLINGKSGRLDYDSD----------------GKGDNEPLFTMKA 221 (561)
Q Consensus 160 ~~e~~l~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~liNG~~~~~~~~~~----------------~~~~~~p~~~v~~ 221 (561)
|+|++|+|+||||....++...+..+ ....+++.++|||++. ++|+ ......+.++|++
T Consensus 5 D~e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (209)
T d1aoza2 5 DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQ---FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSP 81 (209)
T ss_dssp SEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCC---SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECT
T ss_pred CceEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCC---cCCCcccccccccccccccCCCCCCceEEEEcC
Confidence 89999999999998766654433332 2345789999999997 3331 1123467899999
Q ss_pred CCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCCCC-CceEEEEEeecc-CCcc
Q 046746 222 GKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQDP-KDYYLIASTRFT-RTVI 299 (561)
Q Consensus 222 G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~-g~y~i~~~~~~~-~~~~ 299 (561)
|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++.|.|+|||||||+|++++++ ++||+++..... .+..
T Consensus 82 g~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~~~~~~~ 161 (209)
T d1aoza2 82 KKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTP 161 (209)
T ss_dssp TCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSC
T ss_pred CCEEEEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999765 479999987654 3566
Q ss_pred eeEEEEEecCCCC
Q 046746 300 TTTAIVRYSDSKG 312 (561)
Q Consensus 300 ~~~ail~y~~~~~ 312 (561)
..+|+++|.+...
T Consensus 162 ~~~ail~y~~~~~ 174 (209)
T d1aoza2 162 PGLTLLNYLPNSV 174 (209)
T ss_dssp CEEEEEEETTSCT
T ss_pred ceeEEEEeCCCCc
Confidence 7899999987654
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.95 E-value=1.8e-28 Score=218.33 Aligned_cols=121 Identities=19% Similarity=0.240 Sum_probs=102.2
Q ss_pred CCCeEEEEEEEEEEEecC-CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccC
Q 046746 25 GSPTFFFTWNVTYGTISP-LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTN 103 (561)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (561)
.+++.+++|++.+..... +|..+.+|+|||++|||+|++++||+|+|+|+|++ .++||||+++.+....||.. .+
T Consensus 23 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~~---~~~~~H~~~~h~~~~~~~~~-~~ 98 (151)
T d1kbva1 23 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNP---SSTVPHNVDFHAATGQGGGA-AA 98 (151)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECT---TCSSCBCCEETTCCSGGGGT-TT
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEcCC---CCceeeeccccccccCCCCc-ce
Confidence 345778999999888775 59999999999999999999999999999999974 35677777776665566542 27
Q ss_pred CccCCCCeEEEEEEecCceeeeeEecCch---hhhccCceeEEEEecCCC
Q 046746 104 CPIPPGKNYTYYLQVKDQIGSYIYHPSTG---FHRAAGGFGGLCIHSRSV 150 (561)
Q Consensus 104 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~ 150 (561)
+.|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++.
T Consensus 99 ~~i~PG~t~~y~f~a-~~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~~~ 147 (151)
T d1kbva1 99 TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG 147 (151)
T ss_dssp TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC
T ss_pred eeeCCCCEEEEEEeC-CCCeEEEEECCCCChHHHHhCCCEEEEEEECCCC
Confidence 889999999999995 6899999999954 689999999999998654
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.7e-27 Score=216.56 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=77.4
Q ss_pred EecCCCcEEEEEEEcCCC-CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcE-EEEEEEeC--Cc
Q 046746 428 MDATYKAFMEIVLENRQN-TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCW-AAILVSMD--NA 503 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~-~~irf~ad--np 503 (561)
+.++.|++|+|+|.|.+. +.|||||||++|+|++++.+... ..++.|||||.|+++++ ++|+|.++ ++
T Consensus 87 ~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~--------~~~~~~kDTv~v~~~~~~v~v~f~~~~~~~ 158 (181)
T d1kv7a3 87 FAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVEGNVSEVLVKFNHDAPKE 158 (181)
T ss_dssp EECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEESSSEEEEEECCCSCCCGG
T ss_pred eEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCcc--------ccCCcceeEEEeCCCceEEEEEEEeeCCCC
Confidence 567899999999999875 68999999999999999755432 23568999999998765 56888765 46
Q ss_pred ceeeeecccchhhhccceEEEEE
Q 046746 504 GMWNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 504 G~w~~HCHil~H~d~GMm~~~~V 526 (561)
|.|+|||||++|+|.|||..|+|
T Consensus 159 G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 159 HAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp GCEEEEESSHHHHHTTCEEEEEC
T ss_pred CeEEEeCChHHHHhCCCCEEEEC
Confidence 99999999999999999999986
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=2.6e-25 Score=202.03 Aligned_cols=125 Identities=20% Similarity=0.242 Sum_probs=98.3
Q ss_pred CCeEEEEEEEEEEEec--CCCe------------eeeEEEECCc------------CCCCeEEecCCCEEEEEEEeCCCC
Q 046746 26 SPTFFFTWNVTYGTIS--PLGI------------PQQGILINGQ------------FPGPNINSTTNDNLVINVFNKLDE 79 (561)
Q Consensus 26 ~~~~~~~l~~~~~~~~--~dG~------------~~~~~~~Ng~------------~pgP~i~v~~Gd~v~v~v~N~l~~ 79 (561)
+++|+|.+.|.+..+. |.+. +.....|+++ +|||+||+++||+|+|+|+|.+++
T Consensus 1 ~~~r~y~iaa~e~~WdY~P~~~~~~~~~~g~~ykK~~y~eyd~tf~~~~~~~~~~g~~GP~Ira~~GD~i~V~f~N~~~~ 80 (180)
T d1sdda1 1 AKLRQFYVAAQSIRWNYRPESTHLSSKPFETSFKKIVYREYEAYFQKEKPQSRTSGLLGPTLYAEVGDIMKVHFKNKAHK 80 (180)
T ss_dssp CCCCEECCEEEEEEEC--------------CCEEEEEEECCCTTTCCCCCCCSSCCSCCCCEEEETTCEEEEEEEECSSS
T ss_pred CceEEEEEEEEEEeeccCCCcccccCccCCceEEEEEEEEeccceeeccCCCcccCCcCCeEEEECCcEEeeEEEeCCCC
Confidence 4678898888888653 3221 1122455665 699999999999999999999999
Q ss_pred CeeeeeCCccCCC----CCCCCCCCcc---CCccCCCCeEEEEEEecCc---------eeeeeEecCch--hhhccCcee
Q 046746 80 PFLLTWPGIQHKK----NSWQDGVLGT---NCPIPPGKNYTYYLQVKDQ---------IGSYIYHPSTG--FHRAAGGFG 141 (561)
Q Consensus 80 ~~~iH~HG~~~~~----~~~~DGv~~~---q~~i~PG~~~~Y~f~~~~~---------~Gt~wYH~H~~--~q~~~Gl~G 141 (561)
+++|||||+.+.. ..+.||++.. +++|.||++|+|+|.++++ +||||||||.+ .|+.+||+|
T Consensus 81 ~~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~gp~~~d~~~gt~~YHshv~~~~~~~~GL~G 160 (180)
T d1sdda1 81 PLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG 160 (180)
T ss_dssp CBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE
T ss_pred CccccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCcccCccCCCCCEEEEEecCCCcHHHhhCCceE
Confidence 9999999997643 3456666554 5689999999999998643 58999999987 588999999
Q ss_pred EEEEecCCC
Q 046746 142 GLCIHSRSV 150 (561)
Q Consensus 142 ~liV~~~~~ 150 (561)
+|||+++..
T Consensus 161 ~lIV~~~g~ 169 (180)
T d1sdda1 161 PLLICKKGT 169 (180)
T ss_dssp EEEEECTTC
T ss_pred EEEEccCCC
Confidence 999999743
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=4.7e-23 Score=189.78 Aligned_cols=94 Identities=28% Similarity=0.439 Sum_probs=81.5
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCC----CCCCCCCCcc---CCccCCCCeEEEEEEecC--------
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKK----NSWQDGVLGT---NCPIPPGKNYTYYLQVKD-------- 120 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~----~~~~DGv~~~---q~~i~PG~~~~Y~f~~~~-------- 120 (561)
+|||+|+|++||+|+|+|+|+++++++|||||+++.. ....||+... +++|+||++++|+|++++
T Consensus 73 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p~~~d 152 (192)
T d2j5wa1 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 152 (192)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTS
T ss_pred CcCCeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCccccccCC
Confidence 7999999999999999999999999999999998743 3345555433 789999999999999864
Q ss_pred -ceeeeeEecCch--hhhccCceeEEEEecCC
Q 046746 121 -QIGSYIYHPSTG--FHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 121 -~~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~ 149 (561)
++||||||||.+ .|+.+||+|+|||+++.
T Consensus 153 ~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g 184 (192)
T d2j5wa1 153 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKD 184 (192)
T ss_dssp CSEEEEEEECCSSHHHHHHHTCEEEEEEECTT
T ss_pred CCCceEEEeCCCCcHHHHhCCCeEEEEEccCC
Confidence 368999999987 58999999999999965
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=8.8e-24 Score=195.77 Aligned_cols=92 Identities=20% Similarity=0.347 Sum_probs=79.3
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-------------ccCCccCCCCeEEEEEEecCce
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-------------GTNCPIPPGKNYTYYLQVKDQI 122 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------------~~q~~i~PG~~~~Y~f~~~~~~ 122 (561)
++||+|++++||+|+|+|+|.++++++|||||+... ..+||.+ ..+|+|.||++|+|+|+++++.
T Consensus 83 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~--~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~~~ 160 (207)
T d2j5wa3 83 ILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFN--KNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEV 160 (207)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCC--GGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCGGG
T ss_pred CcCceEEEECCCEEEEEEEECCCCCccccccccccC--cccccccccCCCCcccCCcCcccceecCCCEEEEEEEecCCC
Confidence 789999999999999999999999999999999753 2344432 1289999999999999997766
Q ss_pred e---------eeeEecCch--hhhccCceeEEEEecCC
Q 046746 123 G---------SYIYHPSTG--FHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 123 G---------t~wYH~H~~--~q~~~Gl~G~liV~~~~ 149 (561)
| |||||||.+ .|+.+||+|+|||+++.
T Consensus 161 gP~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g 198 (207)
T d2j5wa3 161 GPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKG 198 (207)
T ss_dssp SCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTT
T ss_pred CCccCCCCceeEEEccCCChhHhhccCceEEEEEccCC
Confidence 6 999999987 56799999999999874
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.2e-23 Score=186.79 Aligned_cols=85 Identities=13% Similarity=0.176 Sum_probs=75.9
Q ss_pred EecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 428 MDATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
+.++.|++|+|.|.|.+ .+.||||+||+.|++...+ +.+|||+.|+||++++++|++|+||.
T Consensus 62 l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~~~g----------------~~~~dtv~i~pg~~~~~~~~a~~pG~ 125 (149)
T d2j5wa5 62 LTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGI 125 (149)
T ss_dssp CEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEE
T ss_pred eEEEcCCcEEEEEEecCCCCCccceEEEeeEeeeeccC----------------CCCcceEEECCCceEEEEEeCCCCee
Confidence 34678999999999976 4579999999999885432 45899999999999999999999999
Q ss_pred eeeecccchhhhccceEEEEEec
Q 046746 506 WNLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~~ 528 (561)
|+||||++.|++.|||+.|.|.+
T Consensus 126 w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 126 WLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp EEEEECCHHHHHTTCEEEEEEEC
T ss_pred EEEEcCCHHHHhccCceEEEEec
Confidence 99999999999999999999975
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=7.5e-23 Score=183.47 Aligned_cols=85 Identities=22% Similarity=0.409 Sum_probs=75.4
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCcee---------eee
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG---------SYI 126 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~G---------t~w 126 (561)
++||+|++++||+|+|+|+|.++++++|||||+.... .+| ++|.||++++|+|+++++.| |||
T Consensus 83 ~lGP~IraevGD~i~V~f~N~a~~p~SiH~HGv~~~~--~~~------~~v~PGet~tY~w~v~~~~gp~~~d~~c~t~~ 154 (179)
T d2j5wa4 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTES--STV------TPTLPGETLTYVWKIPERSGAGTEDSACIPWA 154 (179)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSSCBCCEESSCBCSC--SCC------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEE
T ss_pred ccCCeEEEECCCEEEEEEEeCCCCCEeEeeccccCCC--CCC------CcccCCccEEEEEEecCccCCccCCCCceeEE
Confidence 6799999999999999999999999999999997643 344 57899999999999866555 999
Q ss_pred EecCch--hhhccCceeEEEEecC
Q 046746 127 YHPSTG--FHRAAGGFGGLCIHSR 148 (561)
Q Consensus 127 YH~H~~--~q~~~Gl~G~liV~~~ 148 (561)
||||++ .|..+||+|+|||+.+
T Consensus 155 YHShv~~~~d~~sGL~GplIVc~k 178 (179)
T d2j5wa4 155 YYSTVDQVKDLYSGLIGPLIVCRR 178 (179)
T ss_dssp EECCTTHHHHHHTTCEEEEEEECC
T ss_pred EecCCCcHHHhhCCCeEEEEEEeC
Confidence 999997 5789999999999975
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=5.8e-22 Score=177.87 Aligned_cols=117 Identities=23% Similarity=0.269 Sum_probs=95.1
Q ss_pred CCCceEEEecceeecchHHhhhhh--cCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCc
Q 046746 159 VEDDFTLLIGDWYTRSHVELGKQL--DSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKT 236 (561)
Q Consensus 159 ~~~e~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~ 236 (561)
+.+|++|+|+||+++.++++.... ........++.++|||+.. |.+.++ |+++||||||+|..+
T Consensus 7 g~ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~-------------p~~~~~-~~~~RlR~iNa~~~~ 72 (165)
T d1kv7a2 7 GIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY-------------PQHAAP-RGWLRLRLLNGCNAR 72 (165)
T ss_dssp TTTEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBSS-------------CEEEEE-EEEEEEEEEECCSSC
T ss_pred CCCcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCccc-------------ceEecc-CcEEEEEEEEcccCc
Confidence 467999999999988765543110 0011123568999999998 888886 679999999999999
Q ss_pred eEEEEE-eCcccEEEeecCccc-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEE
Q 046746 237 SLNFRI-QGHTMKLVEMEGSHV-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIA 290 (561)
Q Consensus 237 ~~~~~i-~gh~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~ 290 (561)
.++|++ +||+|+|||.||+++ +|..++++.|+|||||||+|++++ .+.+.+..
T Consensus 73 ~~~~~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~~~~ 127 (165)
T d1kv7a2 73 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVT 127 (165)
T ss_dssp CEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEE
T ss_pred eeeEEecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEECCC-CCcEEEEE
Confidence 999998 699999999999998 799999999999999999999984 55555554
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=2.4e-21 Score=175.37 Aligned_cols=120 Identities=18% Similarity=0.257 Sum_probs=98.7
Q ss_pred CCCceEEEecceeecchHHhhhhhc-----------CCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEE
Q 046746 159 VEDDFTLLIGDWYTRSHVELGKQLD-----------SGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKY 227 (561)
Q Consensus 159 ~~~e~~l~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rl 227 (561)
.+.|++|+|+||+++.+.++..... .......++.++|||+.+ |.+++++ ++|||
T Consensus 5 gd~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~~-------------p~~~v~~-~~~Rl 70 (174)
T d1gska2 5 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW-------------PYLEVEP-RKYRF 70 (174)
T ss_dssp GGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES-------------CEEECCS-SEEEE
T ss_pred CCCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCccc-------------eEEEecC-ceEEE
Confidence 4789999999999987766532110 001123468999999998 9999875 67999
Q ss_pred EEEEcCCCceEEEEEe-CcccEEEeecCccc-ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEe
Q 046746 228 RICNVGVKTSLNFRIQ-GHTMKLVEMEGSHV-VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIAST 292 (561)
Q Consensus 228 RliN~~~~~~~~~~i~-gh~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~ 292 (561)
||||+|..+.+.|+++ ||+|+|||.||+++ +|+.++++.|+|||||||+|++++.+|.+++..+.
T Consensus 71 RliNa~~~~~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~ 137 (174)
T d1gska2 71 RVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANS 137 (174)
T ss_dssp EEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEEC
T ss_pred EEEecccCceeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCCCCceEEEEcc
Confidence 9999999999999995 78999999999998 59999999999999999999998777877666553
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.85 E-value=1.7e-21 Score=173.89 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=93.3
Q ss_pred ccCCCeEEEE-EEEEEEEec-CCCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCC---CCCeeeeeCCccCCCC--CC
Q 046746 23 EAGSPTFFFT-WNVTYGTIS-PLGIPQQGILINGQFPGPNINSTTNDNLVINVFNKL---DEPFLLTWPGIQHKKN--SW 95 (561)
Q Consensus 23 ~a~~~~~~~~-l~~~~~~~~-~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~~--~~ 95 (561)
.+...++.|. .++...... ..|.....+.+||+ +||+|+|++||+|+|+|+|.. +.++.||+||...... ..
T Consensus 23 ~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~ 101 (153)
T d1e30a_ 23 KVSGDTVTYSGKTVHVVAAAVLPGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVID 101 (153)
T ss_dssp EEETTEEECCSSEEEEEEEESCTTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCC
T ss_pred cccCceEEEEcceeEEeeeecccccccceeecCCC-cCCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCcccccccc
Confidence 3344455554 333332222 34888889999997 799999999999999999974 4677888888755321 11
Q ss_pred CCCCCc-cCCccCCCCeEEEEEEecCceeeeeEecCchhhhccCceeEEEEe
Q 046746 96 QDGVLG-TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 96 ~DGv~~-~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
.++.+. .++.+.||++++|.|++++++||||||||.+.|+..||+|.|||+
T Consensus 102 ~~~~~~~~~~~v~pg~~~~~~f~~~~~pGty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 102 PIVAGTGFSPVPKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp SEEEEBCCCCCCBTTEEEEEEEEECCCSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred ccCCCccceeeecCCCEEEEEEEeCCCCeEEEEeCCchhHHHCCCEEEEEEC
Confidence 222222 278899999999999988889999999999999999999999996
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=4.6e-22 Score=175.59 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=72.9
Q ss_pred EecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 428 MDATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
+.++.|++|+|.|.|.+ ...||||+||+.|++.+ .++||+.|+||++.+++|+||+||.
T Consensus 61 l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~~~-------------------~~~dt~~i~pg~~~t~~~~a~~pG~ 121 (145)
T d2j5wa2 61 LTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRG-------------------ERRDTANLFPQTSLTLHMWPDTEGT 121 (145)
T ss_dssp CEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETT-------------------EEESEEEECTTCEEEEEECCCSCEE
T ss_pred eEEEcCCeEEEEEEecCCCCcccceEecccEEEecc-------------------cCccceEECCCCEEEEEEEcCCCEe
Confidence 34678999999999965 45699999999998733 3689999999999999999999999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|+||||++.|++.|||..|.|.
T Consensus 122 w~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 122 FNVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp EEEEECSHHHHHTTCEEEEEEE
T ss_pred EEEEcCCHHHHhCCCeEEEEEe
Confidence 9999999999999999999995
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.85 E-value=1.1e-21 Score=171.93 Aligned_cols=82 Identities=13% Similarity=0.221 Sum_probs=73.2
Q ss_pred cCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceee
Q 046746 430 ATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507 (561)
Q Consensus 430 ~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~ 507 (561)
+..|+.|+|.|.|.+ ...||+|+||+.|++.+.+ +.++||+.|+||++.+++|++|+||.|+
T Consensus 56 v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~~~~----------------~~~~dt~~i~pg~~~t~~~~~~~pG~w~ 119 (139)
T d1sddb2 56 MYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWL 119 (139)
T ss_dssp EETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEE
T ss_pred cccCCcEEEEEEecCCCCCcccEEEcceEEEeccCC----------------CCcCCeEEECCCCEEEEEEecCCCEeEE
Confidence 456999999999976 4569999999999875542 3578999999999999999999999999
Q ss_pred eecccchhhhccceEEEEEe
Q 046746 508 LRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 508 ~HCHil~H~d~GMm~~~~V~ 527 (561)
||||+++|++.|||..|.|.
T Consensus 120 ~HcH~~~H~~~GM~~~~~V~ 139 (139)
T d1sddb2 120 LDTEVGEIQRAGMQTPFLIV 139 (139)
T ss_dssp EECCCHHHHTTTCEEEEEEE
T ss_pred EEeCCHHHHhccCcEEEEEC
Confidence 99999999999999999884
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.84 E-value=2.1e-21 Score=171.91 Aligned_cols=94 Identities=18% Similarity=0.073 Sum_probs=79.8
Q ss_pred EEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 427 VMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
.+.++.|++|+|.|.|.. ...||||+||++|+++..+.+.+ + ..++||+.|+||++.+++|++|+||.
T Consensus 52 ~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v~~~G~~~-~----------~~~~~T~~v~pg~~~~~~f~a~~PG~ 120 (151)
T d1kbva2 52 ALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL-I----------NENVQSTIVPAGGSAIVEFKVDIPGN 120 (151)
T ss_dssp CEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-E----------ECSBSEEEECTTEEEEEEEEECSCEE
T ss_pred ceEEEeCCeEEEEEEcCCccccccceeecceeeEEecCCCcC-C----------cccceeEecccCceeEEeeecCCCce
Confidence 356789999999999954 67899999999999998754322 1 13579999999999999999999999
Q ss_pred eeeecccch-hhhccceEEEEEecCCc
Q 046746 506 WNLRSNIWE-RNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 506 w~~HCHil~-H~d~GMm~~~~V~~~~~ 531 (561)
|+||||++. |+++|||..+.|..+++
T Consensus 121 y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 121 YTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp EEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 999999864 57999999999987764
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.83 E-value=1.1e-22 Score=172.32 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=54.7
Q ss_pred ecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 429 DATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 429 ~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.++.|++|+|.|.|.+ ...||||+||+.|++. +.++||+.|+|+++.+++|++|+||.|
T Consensus 38 ~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~~-------------------~~~~dtv~i~pg~~~~v~~~a~~pG~w 98 (116)
T d1sdda2 38 TVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQN-------------------HHKISAITLVSATSTTANMTVSPEGRW 98 (116)
T ss_dssp CCCCC------BBCCCSSSCEECCBCSSTTCEET-------------------TEECSCCCEETTCCBC--------CCC
T ss_pred EEeCCCEEEEEEeccccCCCceeEEEeccccccC-------------------CcccceEeecccEEEEEEEEcCCCeEE
Confidence 4678999999999965 5579999999999873 247899999999999999999999999
Q ss_pred eeecccchhhhccceEE
Q 046746 507 NLRSNIWERNYLGQQLY 523 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~ 523 (561)
+||||++.|++.|||+.
T Consensus 99 ~~HCH~~~H~~~GM~a~ 115 (116)
T d1sdda2 99 TIASLIPRHFQAGMQAY 115 (116)
T ss_dssp CCBCCSTTTGGGTCBCC
T ss_pred EEEcCCHHHHHccceec
Confidence 99999999999999975
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=2.9e-20 Score=164.42 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=72.8
Q ss_pred EecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 428 MDATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
+.++.|++|+|.|.|.+ ...||||+||+.|++ ++.++||+.|+||++.+++|++++||.
T Consensus 62 l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~-------------------~~~~~dt~~i~pg~~~~v~f~~~~pG~ 122 (146)
T d1kcwa2 62 LSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN-------------------KNYRIDTINLFPATLFDAYMVAQNPGE 122 (146)
T ss_dssp CEEETTEEEEEEEECCCSTTCCEEEEETTSCCCC-------------------SSSCCSEEEECTTCEEEEEEEECSCEE
T ss_pred ceEecCCeEEEEEEEcCCCCcccceEeeeeeeec-------------------cCCCcceEEecCCCEEEEEEEcCCCee
Confidence 45678999999999975 456999999999942 246799999999999999999999999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|+||||++.|++.|||..+.|.
T Consensus 123 w~~HCH~~~H~~~GM~~~~~V~ 144 (146)
T d1kcwa2 123 WMLSCQNLNHLKAGLQAFFQVQ 144 (146)
T ss_dssp EEEEECCHHHHHTCCEEEEEEE
T ss_pred EEEEcCCHHHHhcCCeEEEEEE
Confidence 9999999999999999999996
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.68 E-value=4e-17 Score=144.70 Aligned_cols=95 Identities=15% Similarity=0.003 Sum_probs=77.8
Q ss_pred ceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCce--eEEEeCCCcEEEEEEEeCC
Q 046746 425 PNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSR--YTIQVFPNCWAAILVSMDN 502 (561)
Q Consensus 425 ~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~r--DTv~vp~~g~~~irf~adn 502 (561)
.+.++++.|++|.++. +.....|+|||||++|.+|..+ |.+ .+|..+ +|+.|++++.+++.|++++
T Consensus 65 ~~~l~akvGErV~i~~-~~~n~~s~fHliG~hFD~V~~~-G~~----------~~~p~~~~qTv~VppG~a~~ve~~f~~ 132 (173)
T d2bw4a2 65 DHALTAAVGERVLVVH-SQANRDTRPHLIGGHGDYVWAT-GKF----------RNPPDLDQETWLIPGGTAGAAFYTFRQ 132 (173)
T ss_dssp GGCEEEETTCEEEEEE-EESSSCBCEEEETCCEEEEETT-CCT----------TSCCEEEESCCCBCTTEEEEEEEECCS
T ss_pred ccCcccccCCeEEEEe-cCCCCCccceeccceeEEECCC-Ccc----------cCCCcCCceeEEccCCccEEEEEEecC
Confidence 3457789999997654 4447789999999999999875 332 234444 4999999999999999999
Q ss_pred cceeeeecccc-hhhhccceEEEEEecCCc
Q 046746 503 AGMWNLRSNIW-ERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 503 pG~w~~HCHil-~H~d~GMm~~~~V~~~~~ 531 (561)
||.|+||||.+ +|++.|||..++|..+++
T Consensus 133 PG~y~~v~H~l~ea~~~G~~g~l~V~G~~~ 162 (173)
T d2bw4a2 133 PGVYAYVNHNLIEAFELGAAGHFKVTGEWN 162 (173)
T ss_dssp CEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred ceEEEEEechHHHHHhCCCEEEEEEcCCCC
Confidence 99999999965 789999999999976654
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.66 E-value=1.2e-16 Score=140.93 Aligned_cols=101 Identities=17% Similarity=0.200 Sum_probs=82.9
Q ss_pred eEEEECCcCCCCe----EEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCc----c-CCccCCCCeEEEEEE
Q 046746 48 QGILINGQFPGPN----INSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLG----T-NCPIPPGKNYTYYLQ 117 (561)
Q Consensus 48 ~~~~~Ng~~pgP~----i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~----~-q~~i~PG~~~~Y~f~ 117 (561)
..++|||+.++++ |++++||+|+|+|.|.. ..++++|+||.+... .+.||.+. . .+.|+||++.+++|+
T Consensus 36 ~~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~-v~~~G~~~~~~~~~T~~v~pg~~~~~~f~ 114 (151)
T d1kbva2 36 EYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDK-VYVEGGKLINENVQSTIVPAGGSAIVEFK 114 (151)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSE-EEGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred cEEEECCccCCccCccceEEEeCCeEEEEEEcCCccccccceeecceeeE-EecCCCcCCcccceeEecccCceeEEeee
Confidence 3589999988766 99999999999999965 568999999987643 35566532 2 567999999999999
Q ss_pred ecCceeeeeEecCchhh-hccCceeEEEEecCCC
Q 046746 118 VKDQIGSYIYHPSTGFH-RAAGGFGGLCIHSRSV 150 (561)
Q Consensus 118 ~~~~~Gt~wYH~H~~~q-~~~Gl~G~liV~~~~~ 150 (561)
+ +++|+||||||...+ ...||.|.|+|+++.+
T Consensus 115 a-~~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 115 V-DIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp E-CSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred c-CCCceEEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 6 679999999997544 5779999999998643
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.8e-16 Score=139.64 Aligned_cols=95 Identities=14% Similarity=0.138 Sum_probs=81.5
Q ss_pred eEEEECCcCCC--CeEEecCCCEEEEEEEeCC--CCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCcee
Q 046746 48 QGILINGQFPG--PNINSTTNDNLVINVFNKL--DEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG 123 (561)
Q Consensus 48 ~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~G 123 (561)
.++++||..+| |.|++++||+|+++|.|.. ...+++||||...... +.....++|.||++++|+|++ +++|
T Consensus 47 ~~~tiNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~~----~~~~dt~~i~pg~~~~v~f~~-~~pG 121 (146)
T d1kcwa2 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNK----NYRIDTINLFPATLFDAYMVA-QNPG 121 (146)
T ss_dssp EEEESSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCCS----SSCCSEEEECTTCEEEEEEEE-CSCE
T ss_pred ceEEECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeecc----CCCcceEEecCCCEEEEEEEc-CCCe
Confidence 47899999999 9999999999999999975 4568999999865432 111115789999999999995 7899
Q ss_pred eeeEecCchhhhccCceeEEEEec
Q 046746 124 SYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+||||||...++..||.|.++|++
T Consensus 122 ~w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 122 EWMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp EEEEEECCHHHHHTCCEEEEEEEC
T ss_pred eEEEEcCCHHHHhcCCeEEEEEEe
Confidence 999999999999999999999985
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.65 E-value=1.8e-16 Score=138.15 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=82.0
Q ss_pred eeEEEECCcC-CCCeEEecCCCEEEEEEEeCC--CCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCce
Q 046746 47 QQGILINGQF-PGPNINSTTNDNLVINVFNKL--DEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQI 122 (561)
Q Consensus 47 ~~~~~~Ng~~-pgP~i~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~~ 122 (561)
..++++||.. +.|.|++++||+|+++|.|.. +..+++||||..... ..+|.... +++|.||++++|+|+ ++++
T Consensus 39 ~~~~tiNG~~~~~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~--~~~~~~~~dt~~i~pg~~~t~~~~-~~~p 115 (139)
T d1sddb2 39 HEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLE--NGTQQHQLGVWPLLPGSFKTLEMK-ASKP 115 (139)
T ss_dssp CEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEE--CSSSCEEESSEEECTTEEEEEEEE-CCSS
T ss_pred cccceeCcEecCCCccccccCCcEEEEEEecCCCCCcccEEEcceEEEe--ccCCCCcCCeEEECCCCEEEEEEe-cCCC
Confidence 4579999974 889999999999999999975 456899999986643 24444333 678999999999999 5789
Q ss_pred eeeeEecCchhhhccCceeEEEE
Q 046746 123 GSYIYHPSTGFHRAAGGFGGLCI 145 (561)
Q Consensus 123 Gt~wYH~H~~~q~~~Gl~G~liV 145 (561)
|+||||||...+...||+|.++|
T Consensus 116 G~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 116 GWWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEE
T ss_pred EeEEEEeCCHHHHhccCcEEEEE
Confidence 99999999999999999999988
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.8e-16 Score=139.90 Aligned_cols=98 Identities=17% Similarity=0.159 Sum_probs=85.2
Q ss_pred eeEEEECCcCCC--CeEEecCCCEEEEEEEeCC--CCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCc
Q 046746 47 QQGILINGQFPG--PNINSTTNDNLVINVFNKL--DEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQ 121 (561)
Q Consensus 47 ~~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~ 121 (561)
..++++||..+| |.|++++||+|+++|.|.. ...+++|+||..... ..+|.+.. .+.|.||++.+|+|+ ++.
T Consensus 46 ~~~~~iNG~~~~~~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~--~~~g~~~~dtv~i~pg~~~~~~~~-a~~ 122 (149)
T d2j5wa5 46 NKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQY--KHRGVYSSDVFDIFPGTYQTLEMF-PRT 122 (149)
T ss_dssp TEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEE--TTTTCEEESEEEECTTCEEEEEEC-CCS
T ss_pred ccceEECCCcCCCCCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEeee--eccCCCCcceEEECCCceEEEEEe-CCC
Confidence 368999999998 8899999999999999986 457999999976532 35666544 678999999999999 588
Q ss_pred eeeeeEecCchhhhccCceeEEEEec
Q 046746 122 IGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 122 ~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+|+||||||...+...||.|.++|.+
T Consensus 123 pG~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 123 PGIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp CEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred CeeEEEEcCCHHHHhccCceEEEEec
Confidence 99999999999999999999999975
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=1.3e-16 Score=140.09 Aligned_cols=95 Identities=17% Similarity=0.161 Sum_probs=81.6
Q ss_pred eEEEECCcCCC--CeEEecCCCEEEEEEEeCC--CCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCcee
Q 046746 48 QGILINGQFPG--PNINSTTNDNLVINVFNKL--DEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG 123 (561)
Q Consensus 48 ~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~G 123 (561)
.++++||+.+| |.|++++||+|+++|.|.. ...+++|+||..... ++....++.|.||++.+|+|++ +.+|
T Consensus 46 ~~~tiNG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~----~~~~~dt~~i~pg~~~t~~~~a-~~pG 120 (145)
T d2j5wa2 46 KMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW----RGERRDTANLFPQTSLTLHMWP-DTEG 120 (145)
T ss_dssp EEEEETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE----TTEEESEEEECTTCEEEEEECC-CSCE
T ss_pred ceEEECCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEe----cccCccceEECCCCEEEEEEEc-CCCE
Confidence 68999999999 9999999999999999965 456899999986532 2222125789999999999994 7899
Q ss_pred eeeEecCchhhhccCceeEEEEec
Q 046746 124 SYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+||||||...++..||.|.+.|++
T Consensus 121 ~w~~HCH~~~H~~~GM~~~~~V~~ 144 (145)
T d2j5wa2 121 TFNVECLTTDHYTGGMKQKYTVNQ 144 (145)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eEEEEcCCHHHHhCCCeEEEEEec
Confidence 999999999999999999999974
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.61 E-value=9.1e-16 Score=135.57 Aligned_cols=95 Identities=17% Similarity=0.057 Sum_probs=79.5
Q ss_pred ceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCcee--EEEeCCCcEEEEEEEeCC
Q 046746 425 PNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRY--TIQVFPNCWAAILVSMDN 502 (561)
Q Consensus 425 ~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rD--Tv~vp~~g~~~irf~adn 502 (561)
.+.++++.|++|.|+ .+.....|+|||||.+|..|-.+ |.+ .+|..|| |+.|++++.+++.|+++.
T Consensus 65 ~~~l~akvGe~Vri~-~~~~N~~ssfHlIG~hfD~V~~~-G~~----------~n~p~~~~qT~~V~pG~~~~v~~tf~~ 132 (177)
T d1oe1a2 65 ANALTAKVGETVLLI-HSQANRDTRPHLIGGHGDWVWET-GKF----------ANPPQRDLETWFIRGGSAGAALYTFKQ 132 (177)
T ss_dssp GGCEEEETTCEEEEE-EEESSSCBCEEETTCCEEEEETT-CCT----------TSCCEEEESBCCBCTTEEEEEEEECCS
T ss_pred CCCcccccCCeEEEE-ecCCCCCccceecccccceEccC-Cee----------CCCCCcCceeEEecCCccEEEEEEecC
Confidence 345778899999874 45558999999999999998764 432 3566676 999999999999999999
Q ss_pred cceeeeecccc-hhhhccceEEEEEecCCc
Q 046746 503 AGMWNLRSNIW-ERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 503 pG~w~~HCHil-~H~d~GMm~~~~V~~~~~ 531 (561)
||.|+||||.+ +|++.|||..++|..+++
T Consensus 133 PG~Y~fV~H~L~ea~~~Ga~g~l~V~G~~~ 162 (177)
T d1oe1a2 133 PGVYAYLNHNLIEAFELGAAGHIKVEGKWN 162 (177)
T ss_dssp CEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred ceEEEEEecHHHHHHhcCCeEEEEecCCCC
Confidence 99999999975 689999999999986654
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.59 E-value=1.4e-15 Score=130.40 Aligned_cols=96 Identities=11% Similarity=-0.013 Sum_probs=80.3
Q ss_pred CCeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCce
Q 046746 43 LGIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQI 122 (561)
Q Consensus 43 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~ 122 (561)
++....+++++++|++|+|+|++||+|+++|+|.......+|+|++...+ ++..+.||++.+|+|+ ++++
T Consensus 36 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~~~~---------~~~~~~PG~~~~~~F~-a~~~ 105 (132)
T d1fwxa1 36 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYG---------VAMEIGPQMTSSVTFV-AANP 105 (132)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------EEEEECTTCEEEEEEE-CCSC
T ss_pred CceEEEEEeecCcccCCEEEEcCCCEEEEEEEcCCCCccceEeechhhhc---------cccccCCCEEEEEEEe-CCCC
Confidence 35666788999999999999999999999999998777889999985432 2356899999999999 5789
Q ss_pred eeeeEecCch-hhhccCceeEEEEecC
Q 046746 123 GSYIYHPSTG-FHRAAGGFGGLCIHSR 148 (561)
Q Consensus 123 Gt~wYH~H~~-~q~~~Gl~G~liV~~~ 148 (561)
|+||||||.- .....||.|.|||+|+
T Consensus 106 G~y~~~C~~~cg~~H~~M~G~iiVePk 132 (132)
T d1fwxa1 106 GVYWYYCQWFCHALHMEMRGRMLVEPK 132 (132)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred eEEEEECccccCcchhcCEEEEEEEcC
Confidence 9999999853 2223699999999984
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.56 E-value=1.1e-16 Score=134.80 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=64.4
Q ss_pred eEEEECCcCCC--CeEEecCCCEEEEEEEeCC--CCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCcee
Q 046746 48 QGILINGQFPG--PNINSTTNDNLVINVFNKL--DEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG 123 (561)
Q Consensus 48 ~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~G 123 (561)
.+|++||..+| |.|++++||+|+++|.|.. +..+++|+||..... +|....+++|.||++.+|+|++ +.+|
T Consensus 22 ~~~tiNG~~~~~~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~----~~~~~dtv~i~pg~~~~v~~~a-~~pG 96 (116)
T d1sdda2 22 LMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NHHKISAITLVSATSTTANMTV-SPEG 96 (116)
T ss_dssp EEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE----TTEECSCCCEETTCCBC---------C
T ss_pred cEEEECCCcCCCCCCeEEeCCCEEEEEEeccccCCCceeEEEecccccc----CCcccceEeecccEEEEEEEEc-CCCe
Confidence 57999999998 6799999999999999965 567899999987632 3332226789999999999995 7899
Q ss_pred eeeEecCchhhhccCceeEE
Q 046746 124 SYIYHPSTGFHRAAGGFGGL 143 (561)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~l 143 (561)
+||||||...+...||.|.|
T Consensus 97 ~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 97 RWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCCCBCCSTTTGGGTCBCCC
T ss_pred EEEEEcCCHHHHHccceecC
Confidence 99999999999999999864
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.54 E-value=1.8e-14 Score=120.20 Aligned_cols=95 Identities=14% Similarity=0.033 Sum_probs=76.5
Q ss_pred EecCCCee-eeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEE
Q 046746 39 TISPLGIP-QQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQ 117 (561)
Q Consensus 39 ~~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~ 117 (561)
+...+|.. +.++.+|+.++.++|+|++||+|+++++|.....+++++|+... +..+.||++.+|+|+
T Consensus 17 ~~~~~g~~~~~~~~~~~~~~P~~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~------------~~~~~pG~t~~~~f~ 84 (112)
T d1ibya_ 17 ELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAFGV------------QEVIKAGETKTISFT 84 (112)
T ss_dssp EEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEEE
T ss_pred eeccCCeEEEEEEeecCCCCCCEEEEeCCCEEEEEEEeCCCCceeeeeccccc------------ccccCCcceEEEEEE
Confidence 34557776 56777888877679999999999999999977677777776522 356889999999999
Q ss_pred ecCceeeeeEecCchhhhccCceeEEEEec
Q 046746 118 VKDQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 118 ~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
++++|+||||||.+.. ..||.|.|+|.+
T Consensus 85 -~~~~G~y~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 85 -ADKAGAFTIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp -CCSCEEEEEBCSSSCT-TTBCCEEEEEEC
T ss_pred -eccceEEEEECcccCh-hhcCeEEEEEEC
Confidence 5789999999998633 467999999974
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.46 E-value=2.3e-14 Score=127.01 Aligned_cols=92 Identities=13% Similarity=-0.003 Sum_probs=75.2
Q ss_pred eEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEE-eCCc
Q 046746 426 NVMDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVS-MDNA 503 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~-adnp 503 (561)
..+.++.|++|+|.|.|.+ ...||||||++.+.+...+... ...+...++..+.||+...++|. +++|
T Consensus 60 Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~----------~~~~~~~~~~~v~pg~~~~~~f~~~~~p 129 (153)
T d1e30a_ 60 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVID----------PIVAGTGFSPVPKDGKFGYTNFTWHPTA 129 (153)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCC----------SEEEEBCCCCCCBTTEEEEEEEEECCCS
T ss_pred CeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCcccccccc----------ccCCCccceeeecCCCEEEEEEEeCCCC
Confidence 3578999999999999976 5789999999887665443211 11234568888899999999997 6899
Q ss_pred ceeeeecccchhhhccceEEEEEe
Q 046746 504 GMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 504 G~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|.||||+..|...||+..+.|+
T Consensus 130 Gty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 130 GTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEEC
T ss_pred eEEEEeCCchhHHHCCCEEEEEEC
Confidence 999999999999999999999884
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.40 E-value=6.8e-14 Score=103.48 Aligned_cols=45 Identities=27% Similarity=0.468 Sum_probs=40.5
Q ss_pred ccCCCCeEEEEEEecCcee---------eeeEecCch--hhhccCceeEEEEecCC
Q 046746 105 PIPPGKNYTYYLQVKDQIG---------SYIYHPSTG--FHRAAGGFGGLCIHSRS 149 (561)
Q Consensus 105 ~i~PG~~~~Y~f~~~~~~G---------t~wYH~H~~--~q~~~Gl~G~liV~~~~ 149 (561)
+|.||++|+|+|++++..| |||||||.+ .|+.+||+|+|||+++.
T Consensus 2 ~V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g 57 (67)
T d1sddb1 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 57 (67)
T ss_dssp CBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred cCCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCC
Confidence 5899999999999977666 999999997 58999999999999875
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.34 E-value=2.4e-12 Score=109.90 Aligned_cols=90 Identities=16% Similarity=0.085 Sum_probs=67.7
Q ss_pred EecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 428 MDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
+.++.|++|+|.+.|.. ...+-+|.||..+. ... +.. .....+...|.||++...+|.+++||.|
T Consensus 36 i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~--~~~---~~~---------~~~~~~~~~I~PG~s~~y~f~a~~~Gt~ 101 (129)
T d1aoza1 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQR--GTP---WAD---------GTASISQCAINPGETFFYNFTVDNPGTF 101 (129)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCCT--TCG---GGS---------CCBTTTBCCBCTTCEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEeCCCCCCeeeeeccceee--ccC---ccc---------cccccccceECCCCEEEEEEECCCCCce
Confidence 56788999999999974 44666777776541 111 000 0111234458899999999999999999
Q ss_pred eeecccchhhhccceEEEEEecCCc
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
+||||+..|...||...+.|++++.
T Consensus 102 ~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 102 FYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp EEEECSTTTGGGTCEEEEEEECCTT
T ss_pred EEecCCHHHHhCCCEEEEEEcCCCC
Confidence 9999999999999999999987764
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.19 E-value=1e-11 Score=109.39 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=61.8
Q ss_pred EEecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 427 VMDATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
++.++.|++|+|.+.|.. ...|.+|+||... +.+. ...-.|.||++.+++|++++||
T Consensus 65 ~I~v~~GD~V~i~l~N~~~~~~~Hg~~~h~~~~-----~~~~----------------~~~~~i~PGet~ty~f~a~~pG 123 (157)
T d2bw4a1 65 LMVVHENDYVELRLINPDTNTLLHNIDFHAATG-----ALGG----------------GALTQVNPGEETTLRFKATKPG 123 (157)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCS-----GGGG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred eEEEECCcEEEEEEEeCCCCcceEeeeecccCC-----CcCC----------------cceeeECcCCEEeEEEECCCCc
Confidence 367889999999999953 3446667766432 1110 0111378999999999999999
Q ss_pred eeeeecc----cchhhhccceEEEEEecC
Q 046746 505 MWNLRSN----IWERNYLGQQLYLSVRLH 529 (561)
Q Consensus 505 ~w~~HCH----il~H~d~GMm~~~~V~~~ 529 (561)
.|+|||| +..|...||...+.|.+.
T Consensus 124 t~~YH~H~~~~~~~h~~~Gl~G~~iV~p~ 152 (157)
T d2bw4a1 124 VFVYHCAPEGMVPWHVTSGMNGAIMVLPR 152 (157)
T ss_dssp EEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred cceEEECCCCchHHHHhCCCEEEEEEeCC
Confidence 9999999 678999999999988543
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.19 E-value=3.1e-11 Score=106.90 Aligned_cols=90 Identities=10% Similarity=-0.079 Sum_probs=70.3
Q ss_pred EecCCCcEEEEEEEcCC-CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 428 MDATYKAFMEIVLENRQ-NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
+.++.|+.|+|.+.|.. ...|.+|.||..+.......|. +.......+++|++...+|.++.+|.|
T Consensus 69 I~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~-------------~~~~~~~i~~pg~~~~y~f~~~~~Gt~ 135 (162)
T d2q9oa1 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGA-------------NGVTECPIPPKGGQRTYRWRARQYGTS 135 (162)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC-------------BTTTBCCBCTTTEEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEecCcccccccccccccccCCCcCCCC-------------cccccceecCCCCEEEeeecCCCCEEE
Confidence 56788999999999965 5778999999887432221111 111223346789999999999999999
Q ss_pred eeecccchhhhccceEEEEEecCC
Q 046746 507 NLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
+||||+..|...||...+.|.+++
T Consensus 136 wYH~H~~~q~~~Gl~G~~iV~~p~ 159 (162)
T d2q9oa1 136 WYHSHFSAQYGNGVVGTIQINGPA 159 (162)
T ss_dssp EEEECSTTGGGGTCEEEEEEECCC
T ss_pred EeecCCHHHHhCCCEEEEEECCCC
Confidence 999999999999999999998764
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.19 E-value=3.1e-11 Score=102.61 Aligned_cols=94 Identities=10% Similarity=0.029 Sum_probs=75.1
Q ss_pred CeeeeEEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCcee
Q 046746 44 GIPQQGILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIG 123 (561)
Q Consensus 44 G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~G 123 (561)
+....++.+..++..+.|+|++||+|.++++|.....-.+|..++...+ ++..+.||++.++.|+ ++++|
T Consensus 36 ~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~---------v~~~~~PG~t~~~~f~-~~~~G 105 (131)
T d1qnia1 36 KVRVYMTSVAPQYGMTDFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHG---------VSMEISPQQTASVTFT-AGKPG 105 (131)
T ss_dssp EEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------EEEEECTTCEEEEEEE-CCSSE
T ss_pred ceeEEEEEeccCCccceEEecCCCEEEEEEEccCCCCcceEEEEEeccC---------cccccCCCceEEEEEE-cCCCE
Confidence 3456688889999999999999999999999988666567766664322 2345889999999999 58899
Q ss_pred eeeEecCch-hhhccCceeEEEEec
Q 046746 124 SYIYHPSTG-FHRAAGGFGGLCIHS 147 (561)
Q Consensus 124 t~wYH~H~~-~q~~~Gl~G~liV~~ 147 (561)
+|||||+.- .....||.|.|+|++
T Consensus 106 ~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 106 VYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp EEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEECccccCcchhcCeeEEEEEe
Confidence 999999853 222358999999997
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.15 E-value=2.6e-10 Score=100.37 Aligned_cols=82 Identities=15% Similarity=0.091 Sum_probs=63.6
Q ss_pred EecCCCcEEEEEEEcCCC--CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 428 MDATYKAFMEIVLENRQN--TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
+.++.|++|+|.+.|... ..|.||+||..+.+ + |. .+ -.|.||++.+++|.++.||.
T Consensus 67 I~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~~~~~---~-g~-------~~----------~~I~PG~t~ty~f~a~~~Gt 125 (159)
T d1oe2a1 67 LVVHEGDYVQLTLVNPATNAMPHNVEFHGATGAL---G-GA-------KL----------TNVNPGEQATLRFKADRSGT 125 (159)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---G-GG-------GG----------CCBCTTEEEEEEEECCSCEE
T ss_pred EEEECCcEEEEEEECCCccccccceeeccccCCC---C-Cc-------cc----------ccCCCCCeEEEEEEcCCCce
Confidence 667899999999999754 45778888865311 1 10 01 02789999999999999999
Q ss_pred eeeecc----cchhhhccceEEEEEecCC
Q 046746 506 WNLRSN----IWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 506 w~~HCH----il~H~d~GMm~~~~V~~~~ 530 (561)
|.|||| +..|...||...+.|.+.+
T Consensus 126 ~~yH~H~~~~~~~q~~~Gl~G~liV~p~e 154 (159)
T d1oe2a1 126 FVYHCAPEGMVPWHVVSGMSGTLMVLPRD 154 (159)
T ss_dssp EEEECCCTTCHHHHHHTTCEEEEEEECTT
T ss_pred EEEEeCCCCCchhHHhCCCEEEEEEECCC
Confidence 999999 5679999999999886443
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.14 E-value=1.6e-11 Score=107.83 Aligned_cols=83 Identities=13% Similarity=0.013 Sum_probs=64.5
Q ss_pred EEecCCCcEEEEEEEcCC--CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 427 VMDATYKAFMEIVLENRQ--NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
.+.++.|++|+|.+.|.. ...|.+|+||..... +. ...-.|+||++.+++|++++||
T Consensus 63 ti~v~~Gd~v~i~~~N~~~~~~~H~~~~h~~~~~~-----~~----------------~~~~~i~PG~t~ty~f~a~~~G 121 (153)
T d1mzya1 63 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGAL-----GG----------------GGLTLINPGEKVVLRFKATRAG 121 (153)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG-----GG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred cEEEeCCCEEEEEEEcCCCCceEccCccccCCcCC-----CC----------------CccccccCCCEEEEEEEcCCCc
Confidence 367889999999999953 567889999864310 00 0112478999999999999999
Q ss_pred eeeeecc-----cchhhhccceEEEEEecCC
Q 046746 505 MWNLRSN-----IWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 505 ~w~~HCH-----il~H~d~GMm~~~~V~~~~ 530 (561)
.|+|||| +..|...||...+.|++.+
T Consensus 122 t~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 122 AFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp EEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred eEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 9999999 4568999999999886543
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.12 E-value=1.6e-10 Score=101.79 Aligned_cols=141 Identities=11% Similarity=0.110 Sum_probs=105.9
Q ss_pred CCceEEEecceeecchHH------------hhhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEE
Q 046746 160 EDDFTLLIGDWYTRSHVE------------LGKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKY 227 (561)
Q Consensus 160 ~~e~~l~~~d~~~~~~~~------------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rl 227 (561)
|+++.+.-+|+|...+.. ....++ -.....|+.+++||+... . ...-.+++++||++
T Consensus 8 D~~~y~~~~d~Y~p~d~~g~~~~~~~~~~~~~d~~~-~m~~~~Pt~vvFNG~v~a-l-------tg~~~l~akvGErV-- 76 (173)
T d2bw4a2 8 DKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVK-AMRTLTPTHIVFNGAVGA-L-------TGDHALTAAVGERV-- 76 (173)
T ss_dssp SEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHH-HHHTTCCSEEEETTSTTT-T-------SGGGCEEEETTCEE--
T ss_pred ceEEEecccEeecCCCCCCCccCcCChhhcchhHHH-HHhccCCCEEEECCCccc-c-------ccccCcccccCCeE--
Confidence 999999999999743221 111111 001236789999998641 0 11146999999976
Q ss_pred EEEEcCCCceEEEEEeCcccEEEeecCcccce--eeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEE
Q 046746 228 RICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ--NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIV 305 (561)
Q Consensus 228 RliN~~~~~~~~~~i~gh~~~via~DG~~~~p--~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail 305 (561)
||+|+++.+..+||++|+.|.++..+|.+..+ ..++++.+.||++..+.++++ .||.|.++++...+.......++|
T Consensus 77 ~i~~~~~n~~s~fHliG~hFD~V~~~G~~~~~p~~~~qTv~VppG~a~~ve~~f~-~PG~y~~v~H~l~ea~~~G~~g~l 155 (173)
T d2bw4a2 77 LVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFELGAAGHF 155 (173)
T ss_dssp EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEE
T ss_pred EEEecCCCCCccceeccceeEEECCCCcccCCCcCCceeEEccCCccEEEEEEec-CceEEEEEechHHHHHhCCCEEEE
Confidence 66788888888999999999999999998754 456799999999999999999 799999999865443334578899
Q ss_pred EecCCCC
Q 046746 306 RYSDSKG 312 (561)
Q Consensus 306 ~y~~~~~ 312 (561)
.++|...
T Consensus 156 ~V~G~~~ 162 (173)
T d2bw4a2 156 KVTGEWN 162 (173)
T ss_dssp EEESCCC
T ss_pred EEcCCCC
Confidence 9988764
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.11 E-value=7.4e-11 Score=103.36 Aligned_cols=81 Identities=9% Similarity=0.006 Sum_probs=59.3
Q ss_pred EecCCCcEEEEEEEcCCC--CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 428 MDATYKAFMEIVLENRQN--TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
+.++.|++|+|.+.|... ..|.+|+|+... +.+. ...+. |.||++.+.+|.+++||.
T Consensus 60 i~v~~Gd~v~v~~~N~~~~~~~H~~~~h~~~~-----~~~~--------------~~~~~--i~PG~t~~y~f~a~~~Gt 118 (151)
T d1kbva1 60 IRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG--------------AAATF--TAPGRTSTFSFKALQPGL 118 (151)
T ss_dssp EEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG--------------TTTTC--BCTTEEEEEEEECCSCEE
T ss_pred EEEECCCEEEEEEEcCCCCceeeecccccccc-----CCCC--------------cceee--eCCCCEEEEEEeCCCCeE
Confidence 667899999999999543 345555555332 1110 01122 678999999999999999
Q ss_pred eeeeccc---chhhhccceEEEEEecC
Q 046746 506 WNLRSNI---WERNYLGQQLYLSVRLH 529 (561)
Q Consensus 506 w~~HCHi---l~H~d~GMm~~~~V~~~ 529 (561)
|+||||. ..|...||+..+.|++.
T Consensus 119 ~~YH~H~~~~~~h~~~Gm~G~liV~p~ 145 (151)
T d1kbva1 119 YIYHCAVAPVGMHIANGMYGLILVEPK 145 (151)
T ss_dssp EEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred EEEECCCCChHHHHhCCCEEEEEEECC
Confidence 9999994 46999999999999543
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.10 E-value=4.3e-10 Score=98.82 Aligned_cols=142 Identities=15% Similarity=0.138 Sum_probs=107.5
Q ss_pred CCceEEEecceeecchHHh--hhhhcCC---------CCCCCCCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEE
Q 046746 160 EDDFTLLIGDWYTRSHVEL--GKQLDSG---------KLLGKPDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYR 228 (561)
Q Consensus 160 ~~e~~l~~~d~~~~~~~~~--~~~~~~~---------~~~~~~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlR 228 (561)
|+++.+.-+|+|...++.- ......+ .....|+.+.+||+...+ .....++++.||++|
T Consensus 8 D~~yyv~e~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~m~~~~P~~vvFNG~~gal--------t~~~~l~akvGe~Vr-- 77 (177)
T d1oe1a2 8 DRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGAL--------TGANALTAKVGETVL-- 77 (177)
T ss_dssp SEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTT--------SGGGCEEEETTCEEE--
T ss_pred ceEEEecccEeecCCCCCCCccccCChhhcchhHHHHHhccCCcEEEECCccccc--------cCCCCcccccCCeEE--
Confidence 9999999999998433211 1100000 012468899999997521 112469999999885
Q ss_pred EEEcCCCceEEEEEeCcccEEEeecCcccce--eeeeeEEEcccceEEEEEEeCCCCCceEEEEEeeccCCcceeEEEEE
Q 046746 229 ICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ--NEYESLDVHVGQCFTVLVTANQDPKDYYLIASTRFTRTVITTTAIVR 306 (561)
Q Consensus 229 liN~~~~~~~~~~i~gh~~~via~DG~~~~p--~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~ 306 (561)
|+++++.+..+||+.|+.|..|..+|.+..+ ..++++.|.||++..+.++++ .||.|.+.++...........++|.
T Consensus 78 i~~~~~N~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~-~PG~Y~fV~H~L~ea~~~Ga~g~l~ 156 (177)
T d1oe1a2 78 LIHSQANRDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFELGAAGHIK 156 (177)
T ss_dssp EEEEESSSCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEE
T ss_pred EEecCCCCCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEec-CceEEEEEecHHHHHHhcCCeEEEE
Confidence 4678888888999999999999999998764 346899999999999999998 8999999998754433456788999
Q ss_pred ecCCCC
Q 046746 307 YSDSKG 312 (561)
Q Consensus 307 y~~~~~ 312 (561)
+.|...
T Consensus 157 V~G~~~ 162 (177)
T d1oe1a2 157 VEGKWN 162 (177)
T ss_dssp EESCCC
T ss_pred ecCCCC
Confidence 988764
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.96 E-value=6.1e-10 Score=96.15 Aligned_cols=101 Identities=9% Similarity=-0.100 Sum_probs=69.3
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEe----ecCCCCCcCCCCCC-CCCCCCceeEEEeCCCcEEEEEEEeC
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVG----MEPGTWNPDKRKSY-NLIDAVSRYTIQVFPNCWAAILVSMD 501 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~----~~~g~~~~~~~~~~-n~~~P~~rDTv~vp~~g~~~irf~ad 501 (561)
.++++.|++|+|+|.|.+...||++++...+.... ...+.........+ .-..-...+|..+.+++...|+|+++
T Consensus 33 ~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i~f~~~ 112 (139)
T d1qhqa_ 33 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTP 112 (139)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEECC
T ss_pred eEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEEEEecC
Confidence 46789999999999999877666555433221100 00000000000000 01122467889999999999999999
Q ss_pred CcceeeeecccchhhhccceEEEEEe
Q 046746 502 NAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 502 npG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
.||.|.||||+..|+..||...+.|.
T Consensus 113 ~~G~y~f~Ct~pgH~~~GM~G~i~V~ 138 (139)
T d1qhqa_ 113 APGTYLYICTFPGHYLAGMKGTLTVT 138 (139)
T ss_dssp SSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred CCeEEEEEcCCcCcccccCeEEEEEc
Confidence 99999999999999999999999985
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.95 E-value=1e-09 Score=98.22 Aligned_cols=93 Identities=22% Similarity=0.295 Sum_probs=74.0
Q ss_pred CCeEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccc---eeeeeeEEE
Q 046746 191 PDGVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVV---QNEYESLDV 267 (561)
Q Consensus 191 ~~~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p~~~~~v~l 267 (561)
...++||||.+. .+.|.++++.|+++||||+|.+....+.|||+|+.|+|++.+|.... +...|++.+
T Consensus 70 ~~~~tING~~f~---------~~~p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v 140 (181)
T d1kv7a3 70 HHANKINGQAFD---------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKV 140 (181)
T ss_dssp GGCEEETTBCCC---------TTCCSEECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEE
T ss_pred ccceeECCEecC---------CCCCceEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCccccCCcceeEEEe
Confidence 357999999971 23478999999999999999998778899999999999999999864 456899999
Q ss_pred cccceEEEEEEeCC---CCCceEEEEEee
Q 046746 268 HVGQCFTVLVTANQ---DPKDYYLIASTR 293 (561)
Q Consensus 268 ~pgeR~dv~v~~~~---~~g~y~i~~~~~ 293 (561)
.|++ ..++|.+.. .+|.|.++++..
T Consensus 141 ~~~~-~~v~v~f~~~~~~~G~w~fHCHil 168 (181)
T d1kv7a3 141 EGNV-SEVLVKFNHDAPKEHAYMAHCHLL 168 (181)
T ss_dssp SSSE-EEEEECCCSCCCGGGCEEEEESSH
T ss_pred CCCc-eEEEEEEEeeCCCCCeEEEeCChH
Confidence 7664 344454432 358999998743
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.94 E-value=1.7e-09 Score=93.22 Aligned_cols=91 Identities=14% Similarity=0.124 Sum_probs=65.1
Q ss_pred CCCCeEEecCCCEEEEEEEeCC--CCCeeeeeCCccC------------------CCCCCCCCCCccCCccCCCCeEEEE
Q 046746 56 FPGPNINSTTNDNLVINVFNKL--DEPFLLTWPGIQH------------------KKNSWQDGVLGTNCPIPPGKNYTYY 115 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~------------------~~~~~~DGv~~~q~~i~PG~~~~Y~ 115 (561)
|--.+|+|++||+|++.+.|.- ..+++++...... ...+.++.+-.....+.||++.++.
T Consensus 29 F~p~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i~ 108 (139)
T d1qhqa_ 29 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 108 (139)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EcCCeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEEE
Confidence 4456999999999999999975 4455555432210 0001111110013458999999999
Q ss_pred EEecCceeeeeEecCchhhhccCceeEEEEec
Q 046746 116 LQVKDQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
|+. .++|+||||||...+...||.|.|+|.|
T Consensus 109 f~~-~~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 109 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred Eec-CCCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 996 4799999999998999999999999975
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.90 E-value=1.6e-09 Score=91.87 Aligned_cols=90 Identities=11% Similarity=0.044 Sum_probs=67.2
Q ss_pred EEecCCCcEEEEEEEcCCC-----CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEE-e
Q 046746 427 VMDATYKAFMEIVLENRQN-----TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVS-M 500 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~-----~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~-a 500 (561)
++.++.|+.++|.+.|... ..|.||+||-.+.. ..+... . ..--...|+||+..+.+|. +
T Consensus 35 ~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~-----~~~~dg-v--------~g~~~~~I~PG~~~~y~~~~~ 100 (131)
T d1hfua1 35 LIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRG-----TNWADG-A--------DGVNQCPISPGHAFLYKFTPA 100 (131)
T ss_dssp EEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTT-----CGGGSC-C--------BTTTBCCBCTTCEEEEEECCT
T ss_pred eEEEECCCEEEEEEEECCCCccccccceEEeCCcccCC-----CCCCCC-C--------cccccceECCCCeEEEEEeCC
Confidence 4678899999999999653 46899999965411 111000 0 0011235789999999998 6
Q ss_pred CCcceeeeecccchhhhccceEEEEEecCC
Q 046746 501 DNAGMWNLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 501 dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
+.+|.|.||||...|...||...+.|++++
T Consensus 101 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 101 GHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp TCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 889999999999999999999999998764
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.90 E-value=1.8e-09 Score=89.22 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=62.5
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|+|+|.|.+...|+||+|++.. +..+.||+...++|.++.||.|
T Consensus 39 ~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~---------------------------~~~~~pG~t~~~~f~~~~~G~y 91 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFGV---------------------------QEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEeCCCCceeeeeccccc---------------------------ccccCCcceEEEEEEeccceEE
Confidence 4778999999999999988899999998643 2346778999999999999999
Q ss_pred eeecccchhhhccceEEEEEec
Q 046746 507 NLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~~ 528 (561)
.||||+-.| ..||...+.|.+
T Consensus 92 ~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 92 TIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCT-TTBCCEEEEEEC
T ss_pred EEECcccCh-hhcCeEEEEEEC
Confidence 999998544 367999998864
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.87 E-value=3e-09 Score=90.09 Aligned_cols=89 Identities=12% Similarity=0.069 Sum_probs=66.8
Q ss_pred EecCCCcEEEEEEEcCCC-----CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe-C
Q 046746 428 MDATYKAFMEIVLENRQN-----TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM-D 501 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~-----~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a-d 501 (561)
+.++.|+.|++.+.|... ..|.+|+||...- .. .+.. .+..-....|+||++...+|.+ +
T Consensus 36 I~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~--~~---~~~d---------~~~~~s~~~i~PG~s~~Y~~~~~~ 101 (130)
T d1gyca1 36 ITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQA--GT---NWAD---------GPAFVNQCPIASGHSFLYDFHVPD 101 (130)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT--TC---GGGS---------CCBTTTBCCBCTTEEEEEEEECSS
T ss_pred EEEECCeEEEEEEEecCCCcccCCceeEEecccccc--cc---CCCC---------CccccccCCCCCCCeEEEEEECCC
Confidence 667899999999999753 5678899996551 00 0000 0011112248999999999997 6
Q ss_pred CcceeeeecccchhhhccceEEEEEecCC
Q 046746 502 NAGMWNLRSNIWERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 502 npG~w~~HCHil~H~d~GMm~~~~V~~~~ 530 (561)
.+|.|+||||...|...||...+.|++||
T Consensus 102 ~~Gt~wYH~H~~~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCceeEEecCCHHHHhCCCEEEEEEeCCC
Confidence 79999999999999999999999998875
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.81 E-value=1.9e-08 Score=87.23 Aligned_cols=150 Identities=17% Similarity=0.122 Sum_probs=113.3
Q ss_pred cCCCCCCCCCCCCCCceEEEecceeecchHHh------------hhhhcCCCCCCCCCeEEEcCccCCCCCCCCCCCCCC
Q 046746 147 SRSVVPVPYNRFVEDDFTLLIGDWYTRSHVEL------------GKQLDSGKLLGKPDGVLINGKSGRLDYDSDGKGDNE 214 (561)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~------------~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~ 214 (561)
+.++.++.| |+++.++-+|+|...++.- ...++ -.....|+.+.+||+...+ ...
T Consensus 3 d~~g~~l~y----Dr~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~e-~m~~l~PthVVFNG~vgal--------tg~ 69 (178)
T d1mzya2 3 DHEGKPVRY----DTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVA-VMDTLIPSHIVFNGAVGAL--------TGE 69 (178)
T ss_dssp CTTSCBCCC----SEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHH-HHTTTCCSEEEETTSTTTT--------SGG
T ss_pred CCCCCcccc----CeEEEEecceeecCCCCCCCccccCChhhcchhHHH-HHHccCCCEEEECCccCcc--------cCC
Confidence 444555555 9999999999997332211 01000 0112358999999997521 112
Q ss_pred ceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCcccce--eeeeeEEEcccceEEEEEEeCCCCCceEEEEEe
Q 046746 215 PLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHVVQ--NEYESLDVHVGQCFTVLVTANQDPKDYYLIAST 292 (561)
Q Consensus 215 p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p--~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~ 292 (561)
-.+++++||+| +|+|+++.+.-+||+-|..|..+-.+|.+..+ ..++++.|.+|+..-+.+++. .||.|.+..+.
T Consensus 70 ~aL~AkvGEtV--~~~~~gpN~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~-~PG~Y~~VdH~ 146 (178)
T d1mzya2 70 GALKAKVGDNV--LFVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHN 146 (178)
T ss_dssp GCEEEETTCEE--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESS
T ss_pred CCcccccCCeE--EEecccCCCCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeC-CCeEEEEEccH
Confidence 46999999987 57999999999999999999988899998764 468899999999999999999 79999999987
Q ss_pred eccCCcceeEEEEEecCCCC
Q 046746 293 RFTRTVITTTAIVRYSDSKG 312 (561)
Q Consensus 293 ~~~~~~~~~~ail~y~~~~~ 312 (561)
..+.-...+.|+|.++|...
T Consensus 147 l~~A~~kGA~g~l~V~G~~~ 166 (178)
T d1mzya2 147 LIEAVHKGATAHVLVEGEWD 166 (178)
T ss_dssp HHHHHTTCCEEEEEEESCCC
T ss_pred HHHHHhCCCeEEEEeCCCCC
Confidence 65543456889999988764
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.78 E-value=2.5e-09 Score=96.95 Aligned_cols=97 Identities=11% Similarity=0.013 Sum_probs=72.9
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC---
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN--- 502 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn--- 502 (561)
.++.+..|++|.|+|.|.....|.||.||..+.....+....+. .......+..|+||+..+.+|.+..
T Consensus 76 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~dg--------~~~~~~~~~~v~PG~t~tY~~~~~~~~~ 147 (192)
T d2j5wa1 76 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDN--------TTDFQRADDKVYPGEQYTYMLLATEEQS 147 (192)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCC--------CCGGGTGGGCBCTTCEEEEEEECCSTTS
T ss_pred CeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCCC--------CCCCCcccCcccCCCEEEEEEEccCccc
Confidence 45788999999999999999999999999988543332111111 1112334556899999999998753
Q ss_pred -------cceeeeecccc--hhhhccceEEEEEecCC
Q 046746 503 -------AGMWNLRSNIW--ERNYLGQQLYLSVRLHK 530 (561)
Q Consensus 503 -------pG~w~~HCHil--~H~d~GMm~~~~V~~~~ 530 (561)
+|.|+||||+. .|...||+..+.|.++.
T Consensus 148 p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g 184 (192)
T d2j5wa1 148 PGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKD 184 (192)
T ss_dssp CCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTT
T ss_pred cccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEccCC
Confidence 57999999985 48889999999997653
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.74 E-value=6.5e-09 Score=89.08 Aligned_cols=86 Identities=8% Similarity=0.042 Sum_probs=67.9
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc-ce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA-GM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp-G~ 505 (561)
++.++.|+.|++.+.|.....|.||+||.+. -....|. |. ..++||+..+.+|.++.| |.
T Consensus 47 ~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~--~~~~dG~-------------~~----~~i~pg~~~~y~~~~~~~aGt 107 (140)
T d1kv7a1 47 AVKLQRGKAVTVDIYNQLTEETTLHWHGLEV--PGEVDGG-------------PQ----GIIPPGGKRSVTLNVDQPAAT 107 (140)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCC-------------TT----CCBCTTCEEEEEEECCSCSEE
T ss_pred eEEEECCCEEEEEEEeCccccccEeeeeeec--CCccCCC-------------cc----ceEccCCceeEEEEEecCCee
Confidence 5778899999999999999999999999754 1111110 10 127899999999999886 99
Q ss_pred eeeeccc----chhhhccceEEEEEecCCc
Q 046746 506 WNLRSNI----WERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 506 w~~HCHi----l~H~d~GMm~~~~V~~~~~ 531 (561)
|.||||. ..|...||+..+.|+++|.
T Consensus 108 ~wyH~H~~~~~~~~~~~Gl~G~liV~~~e~ 137 (140)
T d1kv7a1 108 CWFHPHQHGKTGRQVAMGLAGLVVIEDDEI 137 (140)
T ss_dssp EEEECCCTTTHHHHHHTTCCEEEEEECHHH
T ss_pred EEEEECCCCChHHHHhCCCeEEEEECCccc
Confidence 9999996 3688899999999987653
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.65 E-value=3.8e-08 Score=85.91 Aligned_cols=90 Identities=13% Similarity=0.147 Sum_probs=73.4
Q ss_pred eEEEcCccCCCCCCCCCCCCCCceEEEEcCCEEEEEEEEcCCCceEEEEEeCcccEEEeecCccc---------------
Q 046746 193 GVLINGKSGRLDYDSDGKGDNEPLFTMKAGKVYKYRICNVGVKTSLNFRIQGHTMKLVEMEGSHV--------------- 257 (561)
Q Consensus 193 ~~liNG~~~~~~~~~~~~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~--------------- 257 (561)
.++|||+.+. +....+++.|++.+|+|+|.+.. .+.|||||+.|+||+.++...
T Consensus 29 ~~~ing~~~~----------~~~~~~~~~G~~e~W~i~N~~~~-~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~ 97 (154)
T d1gska3 29 VLLLNNKRWH----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPA 97 (154)
T ss_dssp EEEETTBCTT----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCC
T ss_pred eEEECCcCcC----------CCcccccCCCCEEEEEEEeCCCC-CCCEEECCceEEEEEecCCCcccccccccccccCCC
Confidence 6899999871 22456789999999999998874 579999999999998766321
Q ss_pred ------ceeeeeeEEEcccceEEEEEEeCCCCCceEEEEEee
Q 046746 258 ------VQNEYESLDVHVGQCFTVLVTANQDPKDYYLIASTR 293 (561)
Q Consensus 258 ------~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 293 (561)
++...|++.+.||+.+.|.+++.+.+|.|.++++..
T Consensus 98 ~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HCHil 139 (154)
T d1gska3 98 VPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHIL 139 (154)
T ss_dssp BCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred cCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceEEecCcc
Confidence 123579999999999999999765899999999854
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.60 E-value=7.2e-08 Score=81.86 Aligned_cols=91 Identities=13% Similarity=0.057 Sum_probs=67.2
Q ss_pred EecCCCcEEEEEEEcCCC-----CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe-C
Q 046746 428 MDATYKAFMEIVLENRQN-----TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM-D 501 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~-----~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a-d 501 (561)
+.++.|+.++|.+.|... ..+.+|.||-..- +.. + .. ....-....|+||+..+.+|.+ +
T Consensus 36 i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~--~~~---~-~d--------gv~~~t~~~I~PG~~~~Y~~~~~~ 101 (136)
T d1v10a1 36 ITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQA--GTT---E-MD--------GPAFVNQCPIIPNESFVYDFVVPG 101 (136)
T ss_dssp EEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCT--TCG---G-GS--------CCBTTTBCCBCTTEEEEEEEECTT
T ss_pred EEEECCcEEEEEEEeCCCCcccCcceeEEecccccc--ccc---c-cC--------CCCccccceECCCCeEEEEEECCC
Confidence 667889999999999643 4677999994430 110 0 00 0011112347899999999998 5
Q ss_pred CcceeeeecccchhhhccceEEEEEecCCcc
Q 046746 502 NAGMWNLRSNIWERNYLGQQLYLSVRLHKRS 532 (561)
Q Consensus 502 npG~w~~HCHil~H~d~GMm~~~~V~~~~~~ 532 (561)
.+|.|.||||...|...||...+.|++++++
T Consensus 102 ~~Gt~wYH~H~~~q~~~GL~G~liV~~~~dp 132 (136)
T d1v10a1 102 QAGTYWYHSHLSTQYCDGLRGAFVVYDPNDP 132 (136)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTTCT
T ss_pred CccceEEecCchhHHhCCCEEEEEECCCccc
Confidence 6999999999999999999999999887654
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.57 E-value=3.6e-08 Score=79.25 Aligned_cols=82 Identities=18% Similarity=0.302 Sum_probs=53.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
..+|++++||+| ++.|......+++.+..........++....+....||.++++.| +.+|+|||+|.. +...
T Consensus 17 P~~i~v~~GdtV--~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~tf---~~~G~y~y~C~~--H~~~ 89 (98)
T d2plta_ 17 PKTLTIKSGETV--NFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCEP--HQGA 89 (98)
T ss_dssp SSEEEECTTCEE--EEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGG--GGGG
T ss_pred CCEEEECCCCEE--EEEECCCCceeEEEecCCccccccCCcccccccccCCCceEEEEe---cCCceEEEEeCc--CCCC
Confidence 469999999985 567887777777766543221111111111123345666666555 469999999975 6668
Q ss_pred CceeEEEEe
Q 046746 138 GGFGGLCIH 146 (561)
Q Consensus 138 Gl~G~liV~ 146 (561)
||.|.|+|+
T Consensus 90 GM~G~I~Ve 98 (98)
T d2plta_ 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999996
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.52 E-value=1.1e-07 Score=80.31 Aligned_cols=78 Identities=6% Similarity=-0.026 Sum_probs=61.6
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|.|.|.|.+...|.+|-|+ |-+ ..-...+.||....++|+++.||.|
T Consensus 53 ~i~V~~Gd~V~~~ltN~d~~~~v~H~~~----i~~--------------------~~~~~~~~PG~~~~~~F~a~~~G~y 108 (132)
T d1fwxa1 53 SFTVKEGDEVTVIVTNLDEIDDLTHGFT----MGN--------------------YGVAMEIGPQMTSSVTFVAANPGVY 108 (132)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEE----ETT--------------------TTEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEcCCCEEEEEEEcCCCCccceEeec----hhh--------------------hccccccCCCEEEEEEEeCCCCeEE
Confidence 3678999999999999988878776542 211 1123457889999999999999999
Q ss_pred eeecccchhh-hccceEEEEEec
Q 046746 507 NLRSNIWERN-YLGQQLYLSVRL 528 (561)
Q Consensus 507 ~~HCHil~H~-d~GMm~~~~V~~ 528 (561)
.||||..-|. |.||...+.|++
T Consensus 109 ~~~C~~~cg~~H~~M~G~iiVeP 131 (132)
T d1fwxa1 109 WYYCQWFCHALHMEMRGRMLVEP 131 (132)
T ss_dssp EEECCSCCSTTCTTCEEEEEEEC
T ss_pred EEECccccCcchhcCEEEEEEEc
Confidence 9999987776 579999988753
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.48 E-value=1.9e-07 Score=84.43 Aligned_cols=88 Identities=17% Similarity=0.135 Sum_probs=65.2
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc-c-------CCccCCCC-eEEEEEEecCceeeeeEe
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG-T-------NCPIPPGK-NYTYYLQVKDQIGSYIYH 128 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-~-------q~~i~PG~-~~~Y~f~~~~~~Gt~wYH 128 (561)
+..+.+..++.++|++.|. ..+.+|.||.+...-...++... . ...|+||+ ...++|.+ +.+|.|.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~~--~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~a-dnpG~w~~H 147 (190)
T d1v10a3 71 GAVISLPANQVIEISIPGG--GNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVT-DNPGPWFLH 147 (190)
T ss_dssp TTEEEECTTCEEEEEEECC--BSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEEC-CSCEEEEEE
T ss_pred ceeEEccCccEEEEEeccC--ccccccccCceEEEEEcCCCcccccccCcccCEEEeCCCeEEEEEEEEc-CCCeeEEEe
Confidence 3468899999999988885 46789999987643221222111 1 12367764 66799984 789999999
Q ss_pred cCchhhhccCceeEEEEecC
Q 046746 129 PSTGFHRAAGGFGGLCIHSR 148 (561)
Q Consensus 129 ~H~~~q~~~Gl~G~liV~~~ 148 (561)
||...+...||...|++.+.
T Consensus 148 CHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 148 CHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp ESCHHHHTTTCEEEEEESGG
T ss_pred cCchhhhhCCCcEEEEECCC
Confidence 99999999999999998753
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.46 E-value=1e-07 Score=87.49 Aligned_cols=88 Identities=14% Similarity=-0.003 Sum_probs=68.2
Q ss_pred eEEecCCCEEEEEEEeCC------CCCeeeeeCCccCCCCCCCCCC-------------Ccc--CCccCCCCeEEEEEEe
Q 046746 60 NINSTTNDNLVINVFNKL------DEPFLLTWPGIQHKKNSWQDGV-------------LGT--NCPIPPGKNYTYYLQV 118 (561)
Q Consensus 60 ~i~v~~Gd~v~v~v~N~l------~~~~~iH~HG~~~~~~~~~DGv-------------~~~--q~~i~PG~~~~Y~f~~ 118 (561)
+++++.|++|+|.+.|.- ...+.+|.||.+...-...+|. |.. ...+.||+..+.+|++
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 589999999999999953 4568999999765221111221 111 2348899999999995
Q ss_pred cCceeeeeEecCchhhhccCceeEEEEecC
Q 046746 119 KDQIGSYIYHPSTGFHRAAGGFGGLCIHSR 148 (561)
Q Consensus 119 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 148 (561)
+.+|.|.||||...+...||...|+|.+.
T Consensus 160 -dnpG~w~~HCH~~~H~~~GM~~~~~v~~~ 188 (214)
T d1aoza3 160 -DNPGVWAFHCHIEPHLHMGMGVVFAEGVE 188 (214)
T ss_dssp -CSCEEEEEEESSHHHHHTTCEEEEEECGG
T ss_pred -CCCeeEEEEECcHHHHhCcCcEEEEEccc
Confidence 78999999999999999999999988764
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.45 E-value=7.3e-07 Score=80.95 Aligned_cols=88 Identities=16% Similarity=0.135 Sum_probs=67.1
Q ss_pred CCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCC-------cc--CCcc-CCCCeEEEEEEecCceeeee
Q 046746 58 GPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVL-------GT--NCPI-PPGKNYTYYLQVKDQIGSYI 126 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~-------~~--q~~i-~PG~~~~Y~f~~~~~~Gt~w 126 (561)
+.+|++..|+.+++.+.|... ..+.+|+||.+...-. .+|.. .. ...| .+|+....+|. ++.+|.|.
T Consensus 69 ~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl~-~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~-adnpG~w~ 146 (200)
T d1hfua3 69 GSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVR-SAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFV-TDNPGPWF 146 (200)
T ss_dssp TSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEE-CTTCCCCCCSSBCEESEEECCSTTCEEEEEEE-CCSCEEEE
T ss_pred CceEEecCCcceEEEEeeccccccCceeecCCcEEEEe-ccCCCCCccccCcccceEEeCCCCEEEEEEEE-CCCCeeeE
Confidence 457999999999999988874 6899999997653211 12211 10 1225 46778889999 47899999
Q ss_pred EecCchhhhccCceeEEEEec
Q 046746 127 YHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 127 YH~H~~~q~~~Gl~G~liV~~ 147 (561)
||||...+...||...|++.+
T Consensus 147 ~HCHi~~H~~~GM~~~~~~~~ 167 (200)
T d1hfua3 147 FHCHIEFHLMNGLAIVFAEDM 167 (200)
T ss_dssp EEESSHHHHHTTCEEEEEECH
T ss_pred EEeCCChHHhCCCcEEEEEcC
Confidence 999999999999998888775
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.39 E-value=3.3e-08 Score=80.52 Aligned_cols=87 Identities=20% Similarity=0.292 Sum_probs=59.7
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc---cCCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG---TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
|-...|++++||+|+ +.|.-..++++......... ...++... ....+.||+++.+.|..++++|+|||+|..
T Consensus 16 F~P~~l~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~C~~- 91 (105)
T d2q5ba1 16 FEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPG-ASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP- 91 (105)
T ss_dssp EESSEEEECTTEEEE--EEECSSCCEEEEECGGGSGG-GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECST-
T ss_pred EeCCEEEECCCCEEE--EEECCCCCceeEeecCcccc-cccccCCccccccccccCCceEEEEEEeccCCceEEEEeCC-
Confidence 445689999999854 67776656666555432110 00000000 034579999999999977789999999986
Q ss_pred hhhccCceeEEEEec
Q 046746 133 FHRAAGGFGGLCIHS 147 (561)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (561)
+...||.|.|+|+.
T Consensus 92 -H~~~GM~G~I~Veg 105 (105)
T d2q5ba1 92 -HRGAGMVGKITVEG 105 (105)
T ss_dssp -TGGGTCEEEEEECC
T ss_pred -CCCCCCEEEEEEcC
Confidence 66779999999973
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.35 E-value=1.6e-07 Score=75.25 Aligned_cols=80 Identities=18% Similarity=0.288 Sum_probs=53.5
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCC-cc--CCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVL-GT--NCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-~~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
|-.+.|++++||+|+ +.|.-..++++........ .|... .. ...+.+|++++|.|+ .+|+|+|+|..
T Consensus 16 F~P~~i~v~~GdtV~--~~n~~~~~H~~~~~~~~~~----~~~~~~~~~~~~~~~~g~t~~~tf~---~~G~y~Y~C~~- 85 (98)
T d1pcsa_ 16 FEPSTVTIKAGEEVK--WVNNKLSPHNIVFDADGVP----ADTAAKLSHKGLLFAAGESFTSTFT---EPGTYTYYCEP- 85 (98)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEECCSSSC----HHHHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGG-
T ss_pred EeCCEEEECCCCEEE--EeECCCCccceEEeccccC----CCccccccccccccCCCcEEEEecc---CCceEEEEecc-
Confidence 445799999999855 5576655566554432100 01000 00 234688999988885 59999999965
Q ss_pred hhhccCceeEEEEe
Q 046746 133 FHRAAGGFGGLCIH 146 (561)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (561)
+...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 86 -HRGAGMVGKVVVE 98 (98)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -CCCCCCEEEEEEC
Confidence 7777999999996
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.35 E-value=1e-06 Score=79.87 Aligned_cols=89 Identities=17% Similarity=0.133 Sum_probs=67.2
Q ss_pred CCeEEecCCCEEEEEEEeCC---CCCeeeeeCCccCCCCCCCCCCCcc-----------CCccCCCCeEEEEEEecCcee
Q 046746 58 GPNINSTTNDNLVINVFNKL---DEPFLLTWPGIQHKKNSWQDGVLGT-----------NCPIPPGKNYTYYLQVKDQIG 123 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~~~~~DGv~~~-----------q~~i~PG~~~~Y~f~~~~~~G 123 (561)
+.++.+..+++++|.+.|.- ...+.+|.||.+...-...+|.... -..++||+....+|.+ +.+|
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~a-dnpG 147 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQT-DNPG 147 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEEC-CSCE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEEC-CCCe
Confidence 44678999999999988864 4568999999875432223333211 1134799999999995 7899
Q ss_pred eeeEecCchhhhccCceeEEEEec
Q 046746 124 SYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
.|.||||...+...||...+++..
T Consensus 148 ~w~~HCHi~~H~~~GM~~~~~~~~ 171 (199)
T d1gyca3 148 PWFLHCHIDFHLEAGFAIVFAEDV 171 (199)
T ss_dssp EEEEEESSHHHHHTTCEEEEEETH
T ss_pred eEEEEcCchhhHhccCcEEEEEcC
Confidence 999999999999999999876654
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=98.32 E-value=5.3e-07 Score=72.24 Aligned_cols=81 Identities=15% Similarity=0.232 Sum_probs=51.3
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCC--CCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhh
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQD--GVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR 135 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~D--Gv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (561)
...|++++||+| +++|.....+++.+............ +.........||+++++.|. ++|+|||+|-. +.
T Consensus 16 P~~i~v~~GdtV--~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf~---~~G~y~y~C~~--H~ 88 (99)
T d1bypa_ 16 PSDLSIASGEKI--TFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP--HA 88 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG--GT
T ss_pred CCEEEECCCCEE--EEEECCCCceeEEEecCCCCCccccccCcccccccccCCCceEEEEec---CCceEEEEECc--CC
Confidence 468999999985 56787665555554432211100000 00000234567888877775 69999999975 66
Q ss_pred ccCceeEEEE
Q 046746 136 AAGGFGGLCI 145 (561)
Q Consensus 136 ~~Gl~G~liV 145 (561)
..||.|.|+|
T Consensus 89 ~~GM~G~I~V 98 (99)
T d1bypa_ 89 GAGMVGKVTV 98 (99)
T ss_dssp TTTCEEEEEE
T ss_pred CCCCEEEEEE
Confidence 7899999998
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.31 E-value=6.8e-07 Score=79.50 Aligned_cols=97 Identities=10% Similarity=-0.056 Sum_probs=68.6
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC---
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN--- 502 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn--- 502 (561)
.++.+..|++|.++|.|.....|.||.||..+.....+....+.. .+.-.-...|+||++.+.+|.++.
T Consensus 60 P~Ira~~GD~i~V~f~N~~~~~~siH~HG~~~~~~~~~~~~~d~~--------~~~~~~~~~V~PGet~tY~w~v~~~~g 131 (180)
T d1sdda1 60 PTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHT--------LPMEKMDDAVAPGQEYTYEWIISEHSG 131 (180)
T ss_dssp CCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCC--------CHHHHTTTCBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCcEEeeEEEeCCCCCccccccccccccccccccccccC--------CCCCccccccCCCCEEEEEEEeCCccc
Confidence 467899999999999999889999999998763322111000000 000000113889999999999852
Q ss_pred -------cceeeeecccch--hhhccceEEEEEecCC
Q 046746 503 -------AGMWNLRSNIWE--RNYLGQQLYLSVRLHK 530 (561)
Q Consensus 503 -------pG~w~~HCHil~--H~d~GMm~~~~V~~~~ 530 (561)
.|.|+||||+.. |...||...+.|.++.
T Consensus 132 p~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g 168 (180)
T d1sdda1 132 PTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKG 168 (180)
T ss_dssp CCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred CccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccCC
Confidence 389999999754 7788999999997764
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=98.28 E-value=5.5e-07 Score=72.03 Aligned_cols=84 Identities=14% Similarity=0.106 Sum_probs=51.8
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhh
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR 135 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (561)
|-..+|++++||+|+ +.|.-...++.....-........++.........|++++++.|. .+|+|||+|-. +.
T Consensus 15 F~P~~i~i~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~---~~G~y~y~C~~--H~ 87 (98)
T d1iuza_ 15 FVPSKISVAAGEAIE--FVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLS---TPGVYGVYCEP--HA 87 (98)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECTT--TG
T ss_pred EeCCEEEECCCCEEE--EEECCCCcccEEEeCCCcccccccccccccCcccCCCcEEEEecC---CCceEEEEeCC--Cc
Confidence 334689999999865 567655554444333211100000000000234577887777664 59999999975 66
Q ss_pred ccCceeEEEEe
Q 046746 136 AAGGFGGLCIH 146 (561)
Q Consensus 136 ~~Gl~G~liV~ 146 (561)
..||.|.|+|+
T Consensus 88 ~~GM~G~I~Ve 98 (98)
T d1iuza_ 88 GAGMKMTITVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCeEEEEEC
Confidence 78999999996
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=98.27 E-value=7.3e-07 Score=71.38 Aligned_cols=79 Identities=19% Similarity=0.285 Sum_probs=54.1
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc-------cCCccCCCCeEEEEEEecCceeeeeEe
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG-------TNCPIPPGKNYTYYLQVKDQIGSYIYH 128 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-------~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 128 (561)
|-...|++++||+|+ ++|.-..++++.+..... ..|... ......||+++++.|. ++|+|.|+
T Consensus 14 F~P~~iti~~GdtV~--f~n~~~~~Hnv~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~t~~~tF~---~~G~y~Y~ 83 (99)
T d1plca_ 14 FVPSEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFY 83 (99)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEE
T ss_pred EeCCEEEECCCCEEE--EEECCCCCccEEEccCcC-----CCccccccCcccccccccCCCceEEEecC---CCceEEEE
Confidence 334689999999864 578765566665443211 112110 0234679999888875 69999999
Q ss_pred cCchhhhccCceeEEEEe
Q 046746 129 PSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 129 ~H~~~q~~~Gl~G~liV~ 146 (561)
|- .+...||.|.|+|.
T Consensus 84 C~--pH~~~GM~G~I~V~ 99 (99)
T d1plca_ 84 CS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CG--GGTTTTCEEEEEEC
T ss_pred eC--CCcCCCcEEEEEEC
Confidence 95 47889999999983
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=98.22 E-value=2e-06 Score=69.53 Aligned_cols=76 Identities=14% Similarity=0.238 Sum_probs=54.8
Q ss_pred cCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCcc-CCccCCCCeEEEEEEecCceeeeeEecCchh
Q 046746 55 QFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGT-NCPIPPGKNYTYYLQVKDQIGSYIYHPSTGF 133 (561)
Q Consensus 55 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 133 (561)
+|-.++|.+++||+|. +.|+-..++++++..- .+|.... ...+.+|++++|.|+ ++|+|.|+|-.|
T Consensus 29 ~F~P~~i~V~~GdtV~--f~N~d~~~H~v~~~~~-------~~~~~~~~~~~~~~g~~~~~tf~---~pG~y~y~C~~H- 95 (105)
T d2ov0a1 29 KYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTFT---EAGTYDYHCTPH- 95 (105)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEEC---SCEEEEEECSSC-
T ss_pred EEeCCEEEECCCCEEE--EEECCCCceeEEEecc-------cCCcccccccccCCCceEEEEec---CCeEEEEEecCC-
Confidence 4556799999999965 6788766677665432 1111111 345789999999885 699999999765
Q ss_pred hhccCceeEEEEe
Q 046746 134 HRAAGGFGGLCIH 146 (561)
Q Consensus 134 q~~~Gl~G~liV~ 146 (561)
.||.|.|+|+
T Consensus 96 ---~~M~G~I~Ve 105 (105)
T d2ov0a1 96 ---PFMRGKVVVE 105 (105)
T ss_dssp ---TTCEEEEEEC
T ss_pred ---CCCEEEEEEC
Confidence 3799999985
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=98.22 E-value=1.1e-06 Score=68.95 Aligned_cols=76 Identities=22% Similarity=0.394 Sum_probs=54.4
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhh
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHR 135 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (561)
|-.+.|++++||+| ++.|.-...+++...+... ..+. ...+.||++++|.|+ .+|+|.|+|.. +.
T Consensus 16 F~P~~i~I~~GdtV--~f~n~d~~~h~~~~~~~~~--~~~~------~~~~~~g~~~~~tF~---~~G~y~Y~C~~--H~ 80 (91)
T d1bxua_ 16 FEPSTIEIQAGDTV--QWVNNKLAPHNVVVEGQPE--LSHK------DLAFSPGETFEATFS---EPGTYTYYCEP--HR 80 (91)
T ss_dssp EESSEEEECTTCEE--EEEECSSCCEEEEETTCGG--GCEE------EEECSTTCEEEEECC---SCEEEEEECTT--TG
T ss_pred EECCEEEECCCCEE--EEEECCcCCceEEeccccc--cccc------ccccCCCCCEEEEec---cCceEEEEeCC--CC
Confidence 33589999999985 5678876666655544311 0011 134678999988885 59999999976 56
Q ss_pred ccCceeEEEEe
Q 046746 136 AAGGFGGLCIH 146 (561)
Q Consensus 136 ~~Gl~G~liV~ 146 (561)
..||.|.|+|+
T Consensus 81 ~~gM~G~I~Ve 91 (91)
T d1bxua_ 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 67999999996
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=98.17 E-value=2.9e-07 Score=74.31 Aligned_cols=79 Identities=11% Similarity=0.105 Sum_probs=47.6
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCC--------Ccc--CCccCCCCeEEEEEEecCceeee
Q 046746 56 FPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGV--------LGT--NCPIPPGKNYTYYLQVKDQIGSY 125 (561)
Q Consensus 56 ~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv--------~~~--q~~i~PG~~~~Y~f~~~~~~Gt~ 125 (561)
|-.++|++++||+|+ ++|.-...++..+-- .. ..++. ... .....+|+++++.| +++|+|
T Consensus 14 F~P~~l~v~~GdtV~--f~n~~~~~h~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---~~~G~y 83 (102)
T d1kdja_ 14 FYPDSITVSAGEAVE--FTLVGETGHNIVFDI---PA--GAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTY 83 (102)
T ss_dssp EESSEEEECTTCCEE--EEECSSSCBCCEECC---CT--TCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEE
T ss_pred EeCCEEEECCCCEEE--EEECCCCceeEEEec---CC--CCCcccccccccCcccccccccCCccEEEEee---CCCceE
Confidence 335799999999865 567654443333211 10 01100 000 12234555555555 469999
Q ss_pred eEecCchhhhccCceeEEEEe
Q 046746 126 IYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 126 wYH~H~~~q~~~Gl~G~liV~ 146 (561)
||+|.. +...||.|.|+|+
T Consensus 84 ~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 84 TFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEECST--TGGGTCEEEEEEC
T ss_pred EEEecC--CcccCCeEEEEEC
Confidence 999986 6789999999996
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=98.16 E-value=1.6e-06 Score=72.16 Aligned_cols=77 Identities=13% Similarity=0.124 Sum_probs=50.9
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
.++|++++||+|+. .|.-...++.-.++ ...++.. .....+|++++|.|. .+|+|.|+|.. +...
T Consensus 20 P~~ltV~~GDTV~f--~n~d~~~h~~~~~~------~~~~~~~--~~~~~~~~~~~~tF~---~~G~Y~Y~C~p--H~~~ 84 (123)
T d1pmya_ 20 PALVRLKPGDSIKF--LPTDKGHNVETIKG------MAPDGAD--YVKTTVGQEAVVKFD---KEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEEE--ECSSSSCCCEECTT------SSCTTCC--CCBCCTTSCEEEECC---SCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEEE--eeCCCCcccccccc------cCccccc--ccccccccccccccC---CCceEEEEecc--CCCC
Confidence 48999999999654 55532222211122 1122221 234567888888775 59999999976 6779
Q ss_pred CceeEEEEecCC
Q 046746 138 GGFGGLCIHSRS 149 (561)
Q Consensus 138 Gl~G~liV~~~~ 149 (561)
||.|.|+|.++.
T Consensus 85 GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 85 GMVALVVVGDKR 96 (123)
T ss_dssp TCEEEEEESSCC
T ss_pred CCEEEEEECCCC
Confidence 999999998753
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=98.12 E-value=1.1e-06 Score=71.13 Aligned_cols=80 Identities=15% Similarity=0.260 Sum_probs=56.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc------c-CCccCCCCeEEEEEEecCceeeeeEecC
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG------T-NCPIPPGKNYTYYLQVKDQIGSYIYHPS 130 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~------~-q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H 130 (561)
-.+|++++||+|+ +.|.-...++....... ..++... . .....|++++++.|..+.++|+|||+|-
T Consensus 18 P~~i~v~~GdtV~--f~n~~~~~h~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T d2cj3a1 18 PAKLTIKPGDTVE--FLNNKVPPHNVVFDAAL-----NPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE 90 (105)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECSSS-----STTCCHHHHHHHCEEEEECSTTCEEEEECCTTCCSEEEEEECT
T ss_pred CCEEEECCCCEEE--EEECCCCceeeEeccCC-----CCccccccCCcccccccccCCCcceEEEEEeccCCceEEEEeC
Confidence 3599999999855 67776555544433211 1111100 0 2347899999999987778999999997
Q ss_pred chhhhccCceeEEEEe
Q 046746 131 TGFHRAAGGFGGLCIH 146 (561)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (561)
. +...||.|.|+|+
T Consensus 91 ~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 91 P--HRGAGMVGKITVA 104 (105)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred C--CcCCCcEEEEEEe
Confidence 5 7788999999996
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.06 E-value=8.7e-06 Score=68.23 Aligned_cols=75 Identities=8% Similarity=0.092 Sum_probs=58.0
Q ss_pred EEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCc
Q 046746 427 VMDATYKAFMEIVLENRQ---NTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNA 503 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnp 503 (561)
.+.++.|+.|.+.+.|.. +..|.|++.+..+. ..+.||....+.|.+++|
T Consensus 52 ~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v~---------------------------~~~~PG~t~~~~f~~~~~ 104 (131)
T d1qnia1 52 DFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGVS---------------------------MEISPQQTASVTFTAGKP 104 (131)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSS
T ss_pred eEEecCCCEEEEEEEccCCCCcceEEEEEeccCcc---------------------------cccCCCceEEEEEEcCCC
Confidence 367899999999999965 34466666543321 236688999999999999
Q ss_pred ceeeeecccchhh-hccceEEEEEec
Q 046746 504 GMWNLRSNIWERN-YLGQQLYLSVRL 528 (561)
Q Consensus 504 G~w~~HCHil~H~-d~GMm~~~~V~~ 528 (561)
|.|.+||+..-|. |.+|...+.|++
T Consensus 105 G~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 105 GVYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEEECccccCcchhcCeeEEEEEe
Confidence 9999999987665 578999988864
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=2.3e-06 Score=77.66 Aligned_cols=101 Identities=13% Similarity=-0.014 Sum_probs=68.0
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc-
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG- 504 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG- 504 (561)
.++.+..|++|+|+|.|.....+.||.||..+.--.. |..-..... . ...+...-.-.|.||++.+.+|.....+
T Consensus 86 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~d--g~~~~~~~~-~-~~~~~~~~~~~V~PGet~tY~w~v~~~~g 161 (207)
T d2j5wa3 86 PVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNE--GTYYSPNYN-P-QSRSVPPSASHVAPTETFTYEWTVPKEVG 161 (207)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGC--SBCCBCC---------CCCCSSCBCTTCEEEEEEECCGGGS
T ss_pred ceEEEECCCEEEEEEEECCCCCccccccccccCcccc--cccccCCCC-c-ccCCcCcccceecCCCEEEEEEEecCCCC
Confidence 4578899999999999999999999999988732111 111000000 0 0001111123478999999999875443
Q ss_pred ---------eeeeecccchhh--hccceEEEEEecCC
Q 046746 505 ---------MWNLRSNIWERN--YLGQQLYLSVRLHK 530 (561)
Q Consensus 505 ---------~w~~HCHil~H~--d~GMm~~~~V~~~~ 530 (561)
.|+||||..... ..||...+.|..+.
T Consensus 162 P~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g 198 (207)
T d2j5wa3 162 PTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKG 198 (207)
T ss_dssp CCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTT
T ss_pred CccCCCCceeEEEccCCChhHhhccCceEEEEEccCC
Confidence 799999986544 67999999997664
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=98.05 E-value=8.3e-06 Score=74.72 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=76.1
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeeEEEECCcCC-----CC-----------------eEEecCCCEEEEEEEeC-C---
Q 046746 24 AGSPTFFFTWNVTYGTISPLGIPQQGILINGQFP-----GP-----------------NINSTTNDNLVINVFNK-L--- 77 (561)
Q Consensus 24 a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~p-----gP-----------------~i~v~~Gd~v~v~v~N~-l--- 77 (561)
+..+++.+++.+. ..|.....|.+||+.- -| .+++...+..++.+.+. .
T Consensus 9 ~~~~d~t~~~~~~-----~~g~~~~~w~iNg~s~~~d~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~n~ 83 (216)
T d2q9oa3 9 VKRPDNTLPVALD-----LTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGP 83 (216)
T ss_dssp CCCGGGEEEEEEE-----CSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSS
T ss_pred CCCCCccEEEEEE-----eCCCcEEEEEECCEecccCCCCCChhhhhcCCcccccccceeeccccccceeEEEEeccCCc
Confidence 3334455555554 2234445688888631 22 45666666665555443 2
Q ss_pred -CCCeeeeeCCccCCCCCCCCCC-----------------------Ccc--CCccCCCCeEEEEEEecCceeeeeEecCc
Q 046746 78 -DEPFLLTWPGIQHKKNSWQDGV-----------------------LGT--NCPIPPGKNYTYYLQVKDQIGSYIYHPST 131 (561)
Q Consensus 78 -~~~~~iH~HG~~~~~~~~~DGv-----------------------~~~--q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (561)
...+-+|+||.+...-....|. |.. ...++||+..+.+|.+ +.+|.|.||||.
T Consensus 84 ~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~a-dnpG~Wl~HCHi 162 (216)
T d2q9oa3 84 FSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRT-DNPGAWLFHCHI 162 (216)
T ss_dssp CCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEEC-CSCEEEEEEECC
T ss_pred cccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEEC-CCCeEEEEEccC
Confidence 3468999999875321111111 100 1248899999999995 789999999999
Q ss_pred hhhhccCceeEEEEec
Q 046746 132 GFHRAAGGFGGLCIHS 147 (561)
Q Consensus 132 ~~q~~~Gl~G~liV~~ 147 (561)
..+...||...++.++
T Consensus 163 ~~H~~~GM~~~~~~~p 178 (216)
T d2q9oa3 163 AWHVSGGLSVDFLERP 178 (216)
T ss_dssp HHHHHTTCEEEEEECH
T ss_pred CcccccCCeEEEEEcc
Confidence 9999999998886655
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=98.00 E-value=1.2e-05 Score=66.81 Aligned_cols=77 Identities=12% Similarity=0.036 Sum_probs=50.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
...|++++||+|+. .|.-...+..-.++. ...+.. .....++++|+|.|. .+|+|.|+|-. +...
T Consensus 20 P~~itI~~GdtV~f--~n~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~tF~---~~G~Y~Y~C~p--H~~~ 84 (123)
T d1adwa_ 20 PAFVRAEPGDVINF--VPTDKSHNVEAIKEI-----LPEGVE---SFKSKINESYTLTVT---EPGLYGVKCTP--HFGM 84 (123)
T ss_dssp SSEEEECTTEEEEE--EESSSSCCCEECTTS-----CCTTCC---CCBCCTTCCEEEEEC---SCEEEEEECGG--GGGG
T ss_pred CCEEEECCCCEEEE--EeCCCCcceecccCc-----cccccc---cccccCCcceEEecc---CCCeEEEEEcc--CCCC
Confidence 47999999999665 555432222221221 111111 244677888888885 59999999976 5678
Q ss_pred CceeEEEEecCC
Q 046746 138 GGFGGLCIHSRS 149 (561)
Q Consensus 138 Gl~G~liV~~~~ 149 (561)
||.|.++|.++.
T Consensus 85 GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 85 GMVGLVQVGDAP 96 (123)
T ss_dssp TCEEEEEESSSC
T ss_pred CCEEEEEECCCC
Confidence 999999997743
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.95 E-value=1.1e-05 Score=65.05 Aligned_cols=79 Identities=13% Similarity=0.160 Sum_probs=53.3
Q ss_pred CCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCch
Q 046746 53 NGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (561)
+-.|-.+.|.+++||+| ++.|.-..++++....... + .++. ....+.+|++|+|.|+ ++|+|.|+|-.|
T Consensus 28 ~~~F~P~~i~V~~GdtV--~f~N~d~~~H~v~~~~~~~-~---~~~f--~s~~~~~~~~~~~tf~---~~G~y~y~C~~H 96 (106)
T d1id2a_ 28 KMKYLTPEVTIKAGETV--YWVNGEVMPHNVAFKKGIV-G---EDAF--RGEMMTKDQAYAITFN---EAGSYDYFCTPH 96 (106)
T ss_dssp TTEESSSEEEECTTCEE--EEEECSSSCBCCEECTTTS-S---SSCE--ECCCBCTTEEEEEEEC---SCEEEEEECSSC
T ss_pred cCEEeCCEEEECCCCEE--EEEECCCCceeEEeccccC-C---cccc--cccccCCCceEEEecC---CCeEEEEEccCC
Confidence 33565679999999985 5678765555554332211 0 1110 0234678998888885 699999999775
Q ss_pred hhhccCceeEEEEe
Q 046746 133 FHRAAGGFGGLCIH 146 (561)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (561)
.||.|.|+|+
T Consensus 97 ----~~M~G~I~Ve 106 (106)
T d1id2a_ 97 ----PFMRGKVIVE 106 (106)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCCEEEEEEC
Confidence 3899999985
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=97.91 E-value=1e-05 Score=67.58 Aligned_cols=92 Identities=15% Similarity=0.070 Sum_probs=62.8
Q ss_pred cCCCCeEEecCC-CEEEEEEEeCCCCCeeeeeCCccC--CC-------------------CCCCCCCCccCCccCCCCeE
Q 046746 55 QFPGPNINSTTN-DNLVINVFNKLDEPFLLTWPGIQH--KK-------------------NSWQDGVLGTNCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v~~G-d~v~v~v~N~l~~~~~iH~HG~~~--~~-------------------~~~~DGv~~~q~~i~PG~~~ 112 (561)
+|---.|.|+.| ++|+|+|+|....+.++=-|-+-. .. .+.++.+-.....|.||++.
T Consensus 14 ~fd~~~i~V~aG~e~v~i~~~N~g~lph~~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~ 93 (129)
T d1cuoa_ 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred cCcccEEEEeCCCEEEEEEEEeCCcCCceeEEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCccccc
Confidence 455578999999 799999999976553221122110 00 01111111014569999999
Q ss_pred EEEEEec--CceeeeeEecCchhhhccCceeEEEEec
Q 046746 113 TYYLQVK--DQIGSYIYHPSTGFHRAAGGFGGLCIHS 147 (561)
Q Consensus 113 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (561)
+..|+++ .++|+|-|-|-...+. .||.|.|+|++
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 94 SVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred eEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 9999986 3599999999887775 79999999974
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=97.91 E-value=4e-06 Score=66.65 Aligned_cols=77 Identities=21% Similarity=0.330 Sum_probs=46.2
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCc---cCCccCCCCeEEEEEEecCceeeeeEecCchhh
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLG---TNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFH 134 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 134 (561)
..+|++++||+|+. .|.-.......+ .... ...+.+. ......+++++++.|+ .+|+|+|+|-. +
T Consensus 18 P~~i~V~~GdtV~f--~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~tf~---~~G~y~Y~C~~--H 85 (97)
T d2jxma1 18 PKALSISAGDTVEF--VMNKVGPHNVIF----DKVP-AGESAPALSNTKLAIAPGSFYSVTLG---TPGTYSFYCTP--H 85 (97)
T ss_dssp SSEEEECTTCEEEE--EECSSCCCCBEE----EECC-TTSCHHHHCBCCCCCSCSCCEEEECC---SCSEEEEECSS--T
T ss_pred CCEEEECCCCEEEE--EECCCcceeEEE----ecCC-CccccccccccccccCcceEEEEecC---CCeEEEEEEcc--C
Confidence 36899999999765 454332221111 1100 0111100 0234566777776664 69999999965 5
Q ss_pred hccCceeEEEEe
Q 046746 135 RAAGGFGGLCIH 146 (561)
Q Consensus 135 ~~~Gl~G~liV~ 146 (561)
...||.|.|+|+
T Consensus 86 ~~~GM~G~I~Ve 97 (97)
T d2jxma1 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 668999999996
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.90 E-value=2.2e-05 Score=64.52 Aligned_cols=76 Identities=14% Similarity=0.140 Sum_probs=50.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
...|++++||+| ++.|.-. .++++.-.- ...+|.. .....+++++++.|+ .+|+|.|+|.. +...
T Consensus 20 P~~itI~~GDTV--~f~n~~~-~Hnv~~~~~-----~~~~~~~--~~~~~~~~~~s~tF~---~~G~y~Y~Ctp--H~~~ 84 (120)
T d1paza_ 20 PAYIKANPGDTV--TFIPVDK-GHNVESIKD-----MIPEGAE--KFKSKINENYVLTVT---QPGAYLVKCTP--HYAM 84 (120)
T ss_dssp SSEEEECTTCEE--EEEESSS-SCCCEECTT-----CSCTTCC--CCBCCTTCCEEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEE--EEeeCCC-cceEeeccc-----cCccccc--ccccccCceEEEEec---CCCeEEEEEee--CCCC
Confidence 478999999996 4556532 334433221 1122221 123456778777775 58999999976 6668
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.++|.++
T Consensus 85 GM~G~I~Vg~~ 95 (120)
T d1paza_ 85 GMIALIAVGDS 95 (120)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEECCC
Confidence 99999999874
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.89 E-value=2.1e-05 Score=65.54 Aligned_cols=91 Identities=15% Similarity=0.109 Sum_probs=63.7
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCCCeeeeeCCc--cC-------------------CCCCCCCCCCccCCccCCCCeE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDEPFLLTWPGI--QH-------------------KKNSWQDGVLGTNCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~~~iH~HG~--~~-------------------~~~~~~DGv~~~q~~i~PG~~~ 112 (561)
+|--..|.| +.|++|+|+|+|....++++=.|-. .. ...+.++.+......|.||++.
T Consensus 14 ~Fd~~~i~V~k~Ge~v~l~~~N~g~~pH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~ 93 (128)
T d1jzga_ 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred cCccceEEEecCCCEEEEEEEeCCccchheeecCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceE
Confidence 344578999 5899999999999765543322221 00 0011222221114569999999
Q ss_pred EEEEEec--CceeeeeEecCchhhhccCceeEEEEe
Q 046746 113 TYYLQVK--DQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 113 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
+..|+++ .++|+|-|-|-...+. .||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 94 SVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 9999986 5799999999887777 7999999995
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=97.88 E-value=1.2e-05 Score=66.71 Aligned_cols=76 Identities=13% Similarity=0.087 Sum_probs=49.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEecCchhhhcc
Q 046746 58 GPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYHPSTGFHRAA 137 (561)
Q Consensus 58 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (561)
...|++++||+| ++.|.-. .+..|.... ...+|.. .....++++|+|.|+ .+|+|.|+|.. +...
T Consensus 20 P~~itI~~GdTV--~w~n~~~-~~~~~~~~~-----~~p~~~~--~~~~~~~~~~s~Tf~---~~G~Y~Y~C~p--H~~~ 84 (124)
T d1bqka_ 20 PASLKVAPGDTV--TFIPTDK-GHNVETIKG-----MIPDGAE--AFKSKINENYKVTFT---APGVYGVKCTP--HYGM 84 (124)
T ss_dssp SSEEEECTTCEE--EEECSSS-SCCCEECTT-----CSCTTCC--CCBCCTTCCEEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCeE--EEEECCC-Ccccccccc-----cCCCccc--cccccCCccEEEecC---CCceEEEEecc--CcCC
Confidence 468999999995 5556532 222222111 1112211 244677888888775 58999999976 5667
Q ss_pred CceeEEEEecC
Q 046746 138 GGFGGLCIHSR 148 (561)
Q Consensus 138 Gl~G~liV~~~ 148 (561)
||.|.|+|.+.
T Consensus 85 GM~G~IvVgd~ 95 (124)
T d1bqka_ 85 GMVGVVQVGDA 95 (124)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEECCC
Confidence 99999999763
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=97.88 E-value=2.1e-05 Score=65.62 Aligned_cols=91 Identities=14% Similarity=0.040 Sum_probs=61.6
Q ss_pred cCCCCeEEe-cCCCEEEEEEEeCCCCCeeeeeCCccC--------------------C-CCCCCCCCCccCCccCCCCeE
Q 046746 55 QFPGPNINS-TTNDNLVINVFNKLDEPFLLTWPGIQH--------------------K-KNSWQDGVLGTNCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~~~iH~HG~~~--------------------~-~~~~~DGv~~~q~~i~PG~~~ 112 (561)
+|---+|.| +.|++|+|+|+|.-..+..+=.|.+.. . ..+..+.+-.....|.||++.
T Consensus 14 kf~~~~i~V~k~G~~V~l~~~N~g~l~h~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~ 93 (129)
T d2ccwa1 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cCccceEEEecCCCEEEEEEEcCCcCchheeeccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCceE
Confidence 355568998 799999999999975442222222211 0 000111111014568999999
Q ss_pred EEEEEec--CceeeeeEecCchhhhccCceeEEEEe
Q 046746 113 TYYLQVK--DQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 113 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
+..|+++ .++|+|+|-|-...+. .||.|.|.|.
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 94 SVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 9999986 4799999999887775 7999999984
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.84 E-value=2.7e-05 Score=68.26 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=63.3
Q ss_pred ceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcc
Q 046746 425 PNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAG 504 (561)
Q Consensus 425 ~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG 504 (561)
..++.+..|++|.++|.|.....+.||.||... . .. ... .|.||+..+-+|.+...+
T Consensus 85 GP~IraevGD~i~V~f~N~a~~p~SiH~HGv~~-----~-~~----------~~~-------~v~PGet~tY~w~v~~~~ 141 (179)
T d2j5wa4 85 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQT-----E-SS----------TVT-------PTLPGETLTYVWKIPERS 141 (179)
T ss_dssp CCCEEEETTEEEEEEEEECSSSCBCCEESSCBC-----S-CS----------CCC-------CBCTTCEEEEEEECCGGG
T ss_pred CCeEEEECCCEEEEEEEeCCCCCEeEeeccccC-----C-CC----------CCC-------cccCCccEEEEEEecCcc
Confidence 346788999999999999999999999999753 0 00 001 277999999999874432
Q ss_pred ----------eeeeecccch--hhhccceEEEEEec
Q 046746 505 ----------MWNLRSNIWE--RNYLGQQLYLSVRL 528 (561)
Q Consensus 505 ----------~w~~HCHil~--H~d~GMm~~~~V~~ 528 (561)
.|+||||+.. |...||...+.|..
T Consensus 142 gp~~~d~~c~t~~YHShv~~~~d~~sGL~GplIVc~ 177 (179)
T d2j5wa4 142 GAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCR 177 (179)
T ss_dssp SCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEEC
T ss_pred CCccCCCCceeEEEecCCCcHHHhhCCCeEEEEEEe
Confidence 8999999964 66789999998863
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.72 E-value=0.0001 Score=60.65 Aligned_cols=85 Identities=13% Similarity=0.143 Sum_probs=58.4
Q ss_pred EEEECCcCCCCeEEecCCCEEEEEEEeCCCCCeeeeeCCccCCCCCCCCCCCccCCccCCCCeEEEEEEecCceeeeeEe
Q 046746 49 GILINGQFPGPNINSTTNDNLVINVFNKLDEPFLLTWPGIQHKKNSWQDGVLGTNCPIPPGKNYTYYLQVKDQIGSYIYH 128 (561)
Q Consensus 49 ~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~PG~~~~Y~f~~~~~~Gt~wYH 128 (561)
+...+-.|-...|.++.|++|+++|+|.- .+ ||+.... . +++.-+.||++.+..|+ ++++|+|+|.
T Consensus 37 v~a~~~~f~p~~l~vp~G~~V~~~lts~D----V~--H~f~ip~---~----~v~~d~~PG~~~~~~~~-~~~~G~y~~~ 102 (122)
T d2cuaa_ 37 VLAFAFGYQPNPIEVPQGAEIVFKITSPD----VI--HGFHVEG---T----NINVEVLPGEVSTVRYT-FKRPGEYRII 102 (122)
T ss_dssp EEEETTEEESSSEEEETTSEEEEEEEBSS----SC--EEEEETT---S----SCEEEECBTBCEEEEEE-CCSCEEEEEE
T ss_pred EEEEeccccCCEEEEeCCCEEEEEEEcCC----cc--ceeEecC---C----CeeEEEecCceEEEEEE-eccceeEEEE
Confidence 33333333345899999999999999973 22 4443211 1 12345779999999998 5789999999
Q ss_pred cCch-hhhccCceeEEEEec
Q 046746 129 PSTG-FHRAAGGFGGLCIHS 147 (561)
Q Consensus 129 ~H~~-~q~~~Gl~G~liV~~ 147 (561)
|+.- .-...+|.|.|+|++
T Consensus 103 C~~~CG~~H~~M~g~i~V~e 122 (122)
T d2cuaa_ 103 CNQYCGLGHQNMFGTIVVKE 122 (122)
T ss_dssp CCSCCSTTSTTCEEEEEEEC
T ss_pred ehhccCCCcccCeEEEEEEC
Confidence 9852 112247999999975
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.70 E-value=5.3e-05 Score=66.16 Aligned_cols=82 Identities=16% Similarity=0.232 Sum_probs=66.2
Q ss_pred eEEEECCc---------CCCCeEEecCCCEEEEEEEeCCC-CCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeE
Q 046746 48 QGILINGQ---------FPGPNINSTTNDNLVINVFNKLD-EPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNY 112 (561)
Q Consensus 48 ~~~~~Ng~---------~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~ 112 (561)
...++||+ -+-++|.+++|+++++|+.|... ....+|.+|..+.. .+.||++.. ...|.|||++
T Consensus 35 d~~liNGkg~~~~~~~~~~~~~~~v~~g~~~rlRlina~~~~~~~~~id~H~~~V-ia~DG~~v~P~~~d~i~i~~GqR~ 113 (168)
T d1v10a2 35 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQRY 113 (168)
T ss_dssp SEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred ceeeecCCCCcCCCCcCCCceEEEECCCCEEEEEEEecccCceEEEEECCCeEEE-EEeCCeecCceEEeEEEEccCceE
Confidence 46789985 24578999999999999999984 45778888876654 469998653 5569999999
Q ss_pred EEEEEecCceeeeeEecC
Q 046746 113 TYYLQVKDQIGSYIYHPS 130 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H 130 (561)
+..+++++.+|.||-+..
T Consensus 114 dvlv~~~~~~~~y~ira~ 131 (168)
T d1v10a2 114 SVVVEANQAVGNYWIRAN 131 (168)
T ss_dssp EEEEECCSCSSEEEEEEE
T ss_pred EEEEECCCCCCcEEEEEE
Confidence 999998666899999864
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.62 E-value=8e-05 Score=65.11 Aligned_cols=82 Identities=18% Similarity=0.278 Sum_probs=65.2
Q ss_pred EEEECCc--------CCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeEEE
Q 046746 49 GILINGQ--------FPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNYTY 114 (561)
Q Consensus 49 ~~~~Ng~--------~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~~Y 114 (561)
...+||. -+.++|.|++|+++++|+.|.. .....++.+|..+.. .++||++.. ...|.|||+++.
T Consensus 38 ~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~~~id~h~~~v-ia~DG~~v~P~~~d~l~i~~gqRydv 116 (170)
T d1gyca2 38 ATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTV-IEVDGINSQPLLVDSIQIFAAQRYSF 116 (170)
T ss_dssp EEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEE
T ss_pred cccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCceeeEEeCCCeEEE-EEeCCeeccceEeeEEEecCCeEEEE
Confidence 4567765 3458999999999999999998 556788888876553 579998652 556999999999
Q ss_pred EEEecCceeeeeEecCc
Q 046746 115 YLQVKDQIGSYIYHPST 131 (561)
Q Consensus 115 ~f~~~~~~Gt~wYH~H~ 131 (561)
.+++++.+|.||-+...
T Consensus 117 lv~~~~~~~~y~ira~~ 133 (170)
T d1gyca2 117 VLNANQTVGNYWIRANP 133 (170)
T ss_dssp EEECCSCSSEEEEEEEE
T ss_pred EEeCCCCCCcEEEEEec
Confidence 99976669999998653
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=97.61 E-value=8.4e-05 Score=61.70 Aligned_cols=91 Identities=13% Similarity=0.067 Sum_probs=63.1
Q ss_pred cCCCCeEEec-CCCEEEEEEEeCCCCCeeeeeCCcc--------------------CCCCCCCCC-CCccCCccCCCCeE
Q 046746 55 QFPGPNINST-TNDNLVINVFNKLDEPFLLTWPGIQ--------------------HKKNSWQDG-VLGTNCPIPPGKNY 112 (561)
Q Consensus 55 ~~pgP~i~v~-~Gd~v~v~v~N~l~~~~~iH~HG~~--------------------~~~~~~~DG-v~~~q~~i~PG~~~ 112 (561)
+|--.+|.|+ .|++|+|+|+|.-.-++++=.|.+- ....+.+|. +-.-...|.||++.
T Consensus 14 ~fd~~~i~V~~~ge~v~i~~~N~g~~pH~~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~ 93 (128)
T d1nwpa_ 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cCcCCeEEEecCCcEEEEEEEeCCccccceeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCce
Confidence 3555789995 5999999999997655444333211 000011111 10004568999999
Q ss_pred EEEEEec--CceeeeeEecCchhhhccCceeEEEEe
Q 046746 113 TYYLQVK--DQIGSYIYHPSTGFHRAAGGFGGLCIH 146 (561)
Q Consensus 113 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (561)
+..|+++ .++|+|-|=|-...++ .||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 9999987 4689999999987787 7999999995
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.61 E-value=3.9e-05 Score=67.85 Aligned_cols=84 Identities=17% Similarity=0.224 Sum_probs=67.2
Q ss_pred eEEEECCc--------CCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeEE
Q 046746 48 QGILINGQ--------FPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNYT 113 (561)
Q Consensus 48 ~~~~~Ng~--------~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~~ 113 (561)
..+++||+ -+...|.+++|++.++||.|.. .....++.+|..+.. .+.||++.. ...|.|||+++
T Consensus 34 d~~LINGkg~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~id~h~~~v-ia~DG~~v~P~~~~~~~i~~GqRyd 112 (181)
T d2q9oa2 34 DNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRYD 112 (181)
T ss_dssp SEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEE
T ss_pred ceEEECCcCCCCCCCCCcceEEEECCCCEEEEEEecccCCccEEEEECCceEEE-EEeCCeEccceEeCEEEecCCcEEE
Confidence 45788886 2346899999999999999998 456788998887654 579998653 55699999999
Q ss_pred EEEEecCceeeeeEecCch
Q 046746 114 YYLQVKDQIGSYIYHPSTG 132 (561)
Q Consensus 114 Y~f~~~~~~Gt~wYH~H~~ 132 (561)
.-+++.+++|.||-.....
T Consensus 113 vlv~a~~~~~~Y~ir~~~~ 131 (181)
T d2q9oa2 113 VVIDASRAPDNYWFNVTFG 131 (181)
T ss_dssp EEEECCSCSSEEEEEEECC
T ss_pred EEEeCCCCCccEEEEEecc
Confidence 9999766689999887653
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.59 E-value=5.4e-05 Score=66.37 Aligned_cols=84 Identities=18% Similarity=0.277 Sum_probs=66.2
Q ss_pred eeEEEECCc--------CCCCeEEecCCCEEEEEEEeCC-CCCeeeeeCCccCCCCCCCCCCCcc-----CCccCCCCeE
Q 046746 47 QQGILINGQ--------FPGPNINSTTNDNLVINVFNKL-DEPFLLTWPGIQHKKNSWQDGVLGT-----NCPIPPGKNY 112 (561)
Q Consensus 47 ~~~~~~Ng~--------~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~-----q~~i~PG~~~ 112 (561)
-...++||+ -+.++|.+++|+++++||.|.. .....++..|..+.. .++||++.. ...|.|||++
T Consensus 34 pd~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~v-ia~DG~~v~P~~~~~l~i~~gqR~ 112 (172)
T d1hfua2 34 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRY 112 (172)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CCcEEECccCccCCCCCCCceEEEECCCCEEEEEEeeecCCceEEEEeCCCeEEE-EEeCCEEcccEEeceEeccCCeEE
Confidence 346678886 3568899999999999999987 456677777776543 568998652 5569999999
Q ss_pred EEEEEecCceeeeeEecCc
Q 046746 113 TYYLQVKDQIGSYIYHPST 131 (561)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~ 131 (561)
+.-+++....|.||..+..
T Consensus 113 dvlv~~~~~~~~Y~ira~~ 131 (172)
T d1hfua2 113 SFVLDANQPVDNYWIRAQP 131 (172)
T ss_dssp EEEEECCSCSSEEEEEEEE
T ss_pred EEEEEcCCCCCcEEEEEEe
Confidence 9999976668999998653
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.52 E-value=5.6e-05 Score=67.08 Aligned_cols=93 Identities=9% Similarity=-0.120 Sum_probs=60.3
Q ss_pred EEecCCCcEEEEEEEcCCCC----------------------CCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCcee
Q 046746 427 VMDATYKAFMEIVLENRQNT----------------------MQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRY 484 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~----------------------~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rD 484 (561)
++.++.|+.++|.+.|.-.. ...+|+||.+.- ....|.-. . ....+
T Consensus 58 tI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~~~--~--------~~~~~ 125 (181)
T d1gska1 58 TIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYPE--A--------WFSKD 125 (181)
T ss_dssp BEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCC--GGGSCCTT--S--------CBCGG
T ss_pred eEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeeccccC--CccCCCcc--c--------ccccC
Confidence 36778899999999996422 245999996531 11112100 0 00001
Q ss_pred -EEEeCCCcEEEEEEEeCCc-ceeeeecccc----hhhhccceEEEEEecCCc
Q 046746 485 -TIQVFPNCWAAILVSMDNA-GMWNLRSNIW----ERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 485 -Tv~vp~~g~~~irf~adnp-G~w~~HCHil----~H~d~GMm~~~~V~~~~~ 531 (561)
+-..+.+.+.+.+|.++.+ |.|.||||.. .|...||...+.|+++++
T Consensus 126 ~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~~ 178 (181)
T d1gska1 126 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 178 (181)
T ss_dssp GSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred cccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCccc
Confidence 1123456677889988765 8999999974 578889999999988764
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.50 E-value=0.00022 Score=61.19 Aligned_cols=96 Identities=15% Similarity=-0.024 Sum_probs=76.2
Q ss_pred cceEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCcee--EEEeCCCcEEEEEEEeC
Q 046746 424 QPNVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRY--TIQVFPNCWAAILVSMD 501 (561)
Q Consensus 424 ~~~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rD--Tv~vp~~g~~~irf~ad 501 (561)
+.+.++.+.|++|. ++.......-.||+-|-+|--|-.. |.+ .|++.++ |+.|++|+-.++.|.+.
T Consensus 68 g~~aL~AkvGEtV~-~~~~gpN~~SsfHvIGg~~D~V~~~-G~~----------~n~p~~~~qT~~v~~G~a~~~~~tf~ 135 (178)
T d1mzya2 68 GEGALKAKVGDNVL-FVHSQPNRDSRPHLIGGHGDLVWET-GKF----------HNAPERDLETWFIRGGTAGAALYKFL 135 (178)
T ss_dssp GGGCEEEETTCEEE-EEEEESSSCBCEEEETCCEEEEETT-CCT----------TSCCEEEESBCCBCTTEEEEEEEECC
T ss_pred CCCCcccccCCeEE-EecccCCCCCCcccccCccceEccC-Ccc----------CCCCCCCceEEEecCCceeEEEEEeC
Confidence 34567788999984 4555557889999999999765543 332 3455554 99999999999999999
Q ss_pred Ccceeeeecccchh-hhccceEEEEEecCCc
Q 046746 502 NAGMWNLRSNIWER-NYLGQQLYLSVRLHKR 531 (561)
Q Consensus 502 npG~w~~HCHil~H-~d~GMm~~~~V~~~~~ 531 (561)
-||.+.|--|.+.. ...|.+..++|..+++
T Consensus 136 ~PG~Y~~VdH~l~~A~~kGA~g~l~V~G~~~ 166 (178)
T d1mzya2 136 QPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 166 (178)
T ss_dssp SCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred CCeEEEEEccHHHHHHhCCCeEEEEeCCCCC
Confidence 99999999999866 5899999999986654
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.09 E-value=0.00081 Score=55.01 Aligned_cols=71 Identities=10% Similarity=0.197 Sum_probs=53.7
Q ss_pred EecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcceee
Q 046746 428 MDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMWN 507 (561)
Q Consensus 428 ~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w~ 507 (561)
+.++.|+.|.|.|.|.+ ..|.|.+-+.. =.+.+.||....+.|.++.||.|.
T Consensus 49 l~vp~G~~V~~~lts~D-V~H~f~ip~~~---------------------------v~~d~~PG~~~~~~~~~~~~G~y~ 100 (122)
T d2cuaa_ 49 IEVPQGAEIVFKITSPD-VIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 100 (122)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEEEETTSS---------------------------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCEEEEEEEcCC-ccceeEecCCC---------------------------eeEEEecCceEEEEEEeccceeEE
Confidence 56899999999999986 44655442211 123466788899999999999999
Q ss_pred eeccc---chhhhccceEEEEEec
Q 046746 508 LRSNI---WERNYLGQQLYLSVRL 528 (561)
Q Consensus 508 ~HCHi---l~H~d~GMm~~~~V~~ 528 (561)
+.|+. ..| .+|...+.|++
T Consensus 101 ~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 101 IICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EECCSCCSTTS--TTCEEEEEEEC
T ss_pred EEehhccCCCc--ccCeEEEEEEC
Confidence 99997 456 47888888863
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.06 E-value=0.00072 Score=61.09 Aligned_cols=77 Identities=9% Similarity=0.214 Sum_probs=61.7
Q ss_pred ceEEecCCCcEEEEEEEcCCC-CCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCC-
Q 046746 425 PNVMDATYKAFMEIVLENRQN-TMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDN- 502 (561)
Q Consensus 425 ~~~~~~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adn- 502 (561)
..++.++.|+++.++|+|.+. ..+.|||+||.|+||+.++. ...|...|.+.|.+|+.+.|.+.+|.
T Consensus 74 ~~~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~-----------~v~P~~v~~l~i~pGqRydvlv~~~~~ 142 (209)
T d1aoza2 74 PYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGN-----------YVQPFYTSDIDIYSGESYSVLITTDQN 142 (209)
T ss_dssp CCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTE-----------EEEEEEESCEEECTTCEEEEEEECCSC
T ss_pred ceEEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEEEecCCE-----------EcccceeeeEEEccCcEEEEEEEecCC
Confidence 446789999999999999985 47999999999999999632 12467789999999999999999965
Q ss_pred cc-eeeeeccc
Q 046746 503 AG-MWNLRSNI 512 (561)
Q Consensus 503 pG-~w~~HCHi 512 (561)
+| .|.++=..
T Consensus 143 ~~~~y~i~~~~ 153 (209)
T d1aoza2 143 PSENYWVSVGT 153 (209)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCceEEEEec
Confidence 44 45554333
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=96.94 E-value=0.00024 Score=56.75 Aligned_cols=85 Identities=14% Similarity=0.050 Sum_probs=59.3
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe-CCcc
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM-DNAG 504 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a-dnpG 504 (561)
..+.++.|++|.| .|.+...|..++....+.. +.. ........++..+.++....+.|.+ +.||
T Consensus 19 ~~l~v~~GdtV~f--~n~~~~~h~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G 83 (105)
T d2q5ba1 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPG-----ASK--------ELADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECGGGSGG-----GCH--------HHHHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEECCCCEEEE--EECCCCCceeEeecCcccc-----ccc--------ccCCccccccccccCCceEEEEEEeccCCc
Confidence 3578899999887 5666666666554333211 000 0001124577888899999999985 7899
Q ss_pred eeeeecccchhhhccceEEEEEe
Q 046746 505 MWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 505 ~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|.|+|.. |...||-..+.|+
T Consensus 84 ~y~y~C~~--H~~~GM~G~I~Ve 104 (105)
T d2q5ba1 84 TYTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECST--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--CCCCCCEEEEEEc
Confidence 99999975 9999999999885
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=96.83 E-value=0.0025 Score=49.08 Aligned_cols=73 Identities=10% Similarity=0.099 Sum_probs=50.6
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.| .|.+...|-....+. . +..-+...+.+|... ++.++.||.
T Consensus 19 ~~i~I~~GdtV~f--~n~d~~~h~~~~~~~---------~--------------~~~~~~~~~~~g~~~--~~tF~~~G~ 71 (91)
T d1bxua_ 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGETF--EATFSEPGT 71 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCEE--EEECCSCEE
T ss_pred CEEEECCCCEEEE--EECCcCCceEEeccc---------c--------------cccccccccCCCCCE--EEEeccCce
Confidence 4577999999988 677665553332111 0 112355666777754 466789999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+.|+|-. |...||-..+.|+
T Consensus 72 y~Y~C~~--H~~~gM~G~I~Ve 91 (91)
T d1bxua_ 72 YTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CCCCCCEEEEEEC
Confidence 9999975 9999999988874
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=96.81 E-value=0.00061 Score=53.56 Aligned_cols=80 Identities=9% Similarity=0.017 Sum_probs=50.0
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.|+ |.+...|.+..+.... ..... ....-+...+.+|.... +.++.||.
T Consensus 19 ~~i~v~~GdtV~~~--n~~~~~H~~~~~~~~~---------~~~~~-------~~~~~~~~~~~~g~t~~--~tf~~~G~ 78 (98)
T d1pcsa_ 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGV---------PADTA-------AKLSHKGLLFAAGESFT--STFTEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSS---------CHHHH-------HHHCEEEEECSTTCEEE--EECCSCEE
T ss_pred CEEEECCCCEEEEe--ECCCCccceEEecccc---------CCCcc-------ccccccccccCCCcEEE--EeccCCce
Confidence 35789999998884 6666666544332111 00000 00112445556666544 45688999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+.|||.. |...||...+.|+
T Consensus 79 y~Y~C~~--H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 79 YTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEecc--CCCCCCEEEEEEC
Confidence 9999965 9999999999884
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=96.75 E-value=0.0012 Score=51.68 Aligned_cols=81 Identities=16% Similarity=0.070 Sum_probs=51.7
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.| .|.+...|.++.+.... .... ..+....+.....++.. +.+.++.||.
T Consensus 18 ~~i~v~~GdtV~f--~n~~~~~h~~~~~~~~~---------~~~~------~~~~~~~~~~~~~~~~t--~~~tf~~~G~ 78 (98)
T d2plta_ 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI---------PSGV------NADAISRDDYLNAPGET--YSVKLTAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS---------CTTC------CHHHHCEEEEECSTTCE--EEEECCSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceeEEEecCCc---------cccc------cCCcccccccccCCCce--EEEEecCCce
Confidence 3578999999888 56666666665543221 0000 00011234444445554 5667789999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|+|.. |...||-..+.|+
T Consensus 79 y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d2plta_ 79 YGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECGG--GGGGTCEEEEEEC
T ss_pred EEEEeCc--CCCCCCEEEEEEC
Confidence 9999974 9999999998874
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=96.67 E-value=0.0013 Score=56.87 Aligned_cols=80 Identities=16% Similarity=0.158 Sum_probs=59.2
Q ss_pred eeeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeee-CCccCCCCCCCCCCCcc------CCccCCCCeEEEEEE
Q 046746 46 PQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTW-PGIQHKKNSWQDGVLGT------NCPIPPGKNYTYYLQ 117 (561)
Q Consensus 46 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~-HG~~~~~~~~~DGv~~~------q~~i~PG~~~~Y~f~ 117 (561)
....+++||+. .|++.++ |.++++|+.|.. .....+++ +|..... ...||.+.. ...|.|||+++.-++
T Consensus 40 ~gd~~lvNG~~-~p~~~~~-~~~~RlR~iNa~~~~~~~~~~~~g~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 116 (165)
T d1kv7a2 40 FGDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNFATSDNRPLYV-IASDGGLLPEPVKVSELPVLMGERFEVLVE 116 (165)
T ss_dssp CCSEEEETTBS-SCEEEEE-EEEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred cCCEEEEcCcc-cceEecc-CcEEEEEEEEcccCceeeEEecCCCeEEE-EEeCCccccCceEeCeEEECCCCEEEEEEE
Confidence 34579999996 7999986 779999999987 45667776 6754332 468997642 456999999999999
Q ss_pred ecCceeeeeEe
Q 046746 118 VKDQIGSYIYH 128 (561)
Q Consensus 118 ~~~~~Gt~wYH 128 (561)
..+..+..|++
T Consensus 117 ~~~~~~~~~~~ 127 (165)
T d1kv7a2 117 VNDNKPFDLVT 127 (165)
T ss_dssp ECTTCCEEEEE
T ss_pred CCCCCcEEEEE
Confidence 75434445554
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=96.58 E-value=0.001 Score=58.03 Aligned_cols=82 Identities=20% Similarity=0.271 Sum_probs=61.6
Q ss_pred eeeeEEEECCcCCCCeEEecCCCEEEEEEEeCC-CCCeeeee-CCccCCCCCCCCCCCcc------CCccCCCCeEEEEE
Q 046746 45 IPQQGILINGQFPGPNINSTTNDNLVINVFNKL-DEPFLLTW-PGIQHKKNSWQDGVLGT------NCPIPPGKNYTYYL 116 (561)
Q Consensus 45 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~-HG~~~~~~~~~DGv~~~------q~~i~PG~~~~Y~f 116 (561)
.....+++||+. .|++.++ |.++++|+.|.. .....+++ +|..+.. ...||.+.. ...|.|||+++.-+
T Consensus 46 ~~Gd~~lvNG~~-~p~~~v~-~~~~RlRliNa~~~~~~~l~~~~g~~~~v-Ia~DG~~l~~P~~~~~l~l~pgeR~dvlv 122 (174)
T d1gska2 46 FCGETILVNGKV-WPYLEVE-PRKYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIII 122 (174)
T ss_dssp CCCSEEEETTEE-SCEEECC-SSEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred ccCCeEEecCcc-ceEEEec-CceEEEEEEecccCceeeEeecCCCcEEE-EEECCCcccCceEeCEEEEcCCcEEEEEE
Confidence 334578999996 7999986 567999999998 45678888 5753322 458997542 44599999999999
Q ss_pred EecCceeeeeEec
Q 046746 117 QVKDQIGSYIYHP 129 (561)
Q Consensus 117 ~~~~~~Gt~wYH~ 129 (561)
+++..+|++|+--
T Consensus 123 ~~~~~~g~~~~l~ 135 (174)
T d1gska2 123 DFTAYEGESIILA 135 (174)
T ss_dssp ECGGGTTCEEEEE
T ss_pred ECCCCCCceEEEE
Confidence 9866678777643
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=96.33 E-value=0.0018 Score=53.08 Aligned_cols=34 Identities=15% Similarity=0.326 Sum_probs=29.4
Q ss_pred EEEEeCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 496 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
+.+.++.||.|.|+|.+ |...||...+.|.++..
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~~~ 97 (123)
T d1pmya_ 64 AVVKFDKEGVYGFKCAP--HYMMGMVALVVVGDKRD 97 (123)
T ss_dssp EEEECCSCEEEEEECST--TTTTTCEEEEEESSCCT
T ss_pred cccccCCCceEEEEecc--CCCCCCEEEEEECCCCC
Confidence 45678999999999976 99999999999987643
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.71 E-value=0.0068 Score=43.43 Aligned_cols=43 Identities=14% Similarity=0.022 Sum_probs=35.8
Q ss_pred eCCCcEEEEEEEeCCcc----------eeeeecccch--hhhccceEEEEEecCC
Q 046746 488 VFPNCWAAILVSMDNAG----------MWNLRSNIWE--RNYLGQQLYLSVRLHK 530 (561)
Q Consensus 488 vp~~g~~~irf~adnpG----------~w~~HCHil~--H~d~GMm~~~~V~~~~ 530 (561)
|.||++.+-+|.....| .|+||||+.. +...||...+.|..+.
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g 57 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 57 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCC
Confidence 67899999999986544 8999999965 6677999999997664
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=95.64 E-value=0.008 Score=46.90 Aligned_cols=82 Identities=12% Similarity=0.099 Sum_probs=49.2
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.| .|.+...|.+......+- .+. .... ... ..+.....+|.+..+ .++.||.
T Consensus 17 ~~iti~~GdtV~f--~n~~~~~Hnv~~~~~~~~-----~~~-~~~~-~~~------~~~~~~~~~g~t~~~--tF~~~G~ 79 (99)
T d1plca_ 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SGV-DASK-ISM------SEEDLLNAKGETFEV--ALSNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TTC-CHHH-HCC------CTTCCBCSTTCEEEE--ECCSCEE
T ss_pred CEEEECCCCEEEE--EECCCCCccEEEccCcCC-----Ccc-cccc-Ccc------cccccccCCCceEEE--ecCCCce
Confidence 3578999999988 576666787654322210 000 0000 000 011122345665544 5578999
Q ss_pred eeeecccchhhhccceEEEEE
Q 046746 506 WNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V 526 (561)
+-|+|- .|...||-..+.|
T Consensus 80 y~Y~C~--pH~~~GM~G~I~V 98 (99)
T d1plca_ 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEeC--CCcCCCcEEEEEE
Confidence 999994 6999999998877
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=95.60 E-value=0.0071 Score=48.99 Aligned_cols=34 Identities=9% Similarity=0.195 Sum_probs=29.0
Q ss_pred EEEEeCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 496 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
..+.++.||.|.|+|-. |...||...+.|.++..
T Consensus 64 ~s~tF~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~~~~ 97 (120)
T d1paza_ 64 YVLTVTQPGAYLVKCTP--HYAMGMIALIAVGDSPA 97 (120)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSSCT
T ss_pred EEEEecCCCeEEEEEee--CCCCCCEEEEEECCCCC
Confidence 35667899999999975 99999999999987654
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=95.60 E-value=0.015 Score=45.77 Aligned_cols=72 Identities=7% Similarity=-0.051 Sum_probs=46.2
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|+.|.| .|.+...|.++.....+ .. ...+.-.+.+++. .++.++.||.+
T Consensus 34 ~i~V~~GdtV~f--~N~d~~~H~v~~~~~~~----------~~-----------~~~~~~~~~~g~~--~~~tf~~pG~y 88 (105)
T d2ov0a1 34 ELHVKVGDTVTW--INREAMPHNVHFVAGVL----------GE-----------AALKGPMMKKEQA--YSLTFTEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTTTS----------SS-----------SCEECCCBCTTEE--EEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEEecccC----------Cc-----------ccccccccCCCce--EEEEecCCeEE
Confidence 467889999888 67777888765332111 00 0112222344554 45566899999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|+|-+ | .||...+.|+
T Consensus 89 ~y~C~~--H--~~M~G~I~Ve 105 (105)
T d2ov0a1 89 DYHCTP--H--PFMRGKVVVE 105 (105)
T ss_dssp EEECSS--C--TTCEEEEEEC
T ss_pred EEEecC--C--CCCEEEEEEC
Confidence 999976 5 5898888874
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.48 E-value=0.033 Score=45.39 Aligned_cols=98 Identities=8% Similarity=-0.022 Sum_probs=67.0
Q ss_pred eEEec-CCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCC------cCC-CCCCC-C-CCCCceeEEEeCCCcEEE
Q 046746 426 NVMDA-TYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWN------PDK-RKSYN-L-IDAVSRYTIQVFPNCWAA 495 (561)
Q Consensus 426 ~~~~~-~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~------~~~-~~~~n-~-~~P~~rDTv~vp~~g~~~ 495 (561)
.-+++ +.|+.|+++|.|.+...|-+=+|- .-++..+. ... ... ...+- . ..-...-|..|.||+...
T Consensus 18 ~~i~V~k~Ge~v~l~~~N~g~~pH~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~~ 94 (128)
T d1jzga_ 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHN--WVLSTAAD-MQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (128)
T ss_dssp SEEEECTTCSEEEEEEECCSSSCHHHHCBC--CEEEEGGG-HHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred ceEEEecCCCEEEEEEEeCCccchheeecC--cccccchh-HHHHHHHHHhhhhccccCCCCccchhhcccccCCCceEE
Confidence 34677 579999999999999999875543 33333221 000 000 00010 0 111334588899999999
Q ss_pred EEEEe---CCcceeeeecccchhhhccceEEEEEe
Q 046746 496 ILVSM---DNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 496 irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|.+ +.||.|.|=|=+--|+ .||-..+.|+
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 95 VTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 99987 5799999999999999 8999999884
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=95.47 E-value=0.0096 Score=46.16 Aligned_cols=31 Identities=13% Similarity=0.156 Sum_probs=26.6
Q ss_pred EEEEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 495 AILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 495 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
.+.+.++.||.|.|+|-. |...||-..+.|+
T Consensus 67 ~~~~tf~~~G~y~Y~C~~--H~~~GM~G~I~Ve 97 (97)
T d2jxma1 67 FYSVTLGTPGTYSFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp CEEEECCSCSEEEEECSS--TTTTTCEEEEEEC
T ss_pred EEEEecCCCeEEEEEEcc--CCCCCCEEEEEEC
Confidence 567778999999999954 9999999998884
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=95.46 E-value=0.026 Score=46.15 Aligned_cols=97 Identities=6% Similarity=-0.068 Sum_probs=66.7
Q ss_pred EEecCCC-cEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCc--------C-CCCCCCCC-CCCceeEEEeCCCcEEE
Q 046746 427 VMDATYK-AFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNP--------D-KRKSYNLI-DAVSRYTIQVFPNCWAA 495 (561)
Q Consensus 427 ~~~~~~g-~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~--------~-~~~~~n~~-~P~~rDTv~vp~~g~~~ 495 (561)
.+.++.| +.|.++|.|.+..+|-+ =+|.+-+...+. ... . ....+... .-..--|..|.||+...
T Consensus 19 ~i~V~aG~e~v~i~~~N~g~lph~~--~~Hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~~ 94 (129)
T d1cuoa_ 19 SISVPASCAEFTVNFEHKGHMPKTG--MGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTS 94 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHH--HCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEE
T ss_pred EEEEeCCCEEEEEEEEeCCcCCcee--EEeeeeeccccc--HHHHHHHHHhhcccccCCCCCchhhhhhccccCccccce
Confidence 4778999 89999999999888765 244554444321 100 0 00001011 11334478899999999
Q ss_pred EEEEe---CCcceeeeecccchhhhccceEEEEEec
Q 046746 496 ILVSM---DNAGMWNLRSNIWERNYLGQQLYLSVRL 528 (561)
Q Consensus 496 irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~~ 528 (561)
|.|.+ ..||.|.|=|=+--|+ .||-..+.|.+
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 95 VKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred EEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 99987 4699999999999998 79999998863
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=94.89 E-value=0.056 Score=43.94 Aligned_cols=96 Identities=6% Similarity=-0.058 Sum_probs=68.7
Q ss_pred EEecC-CCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCc-------CC-CCCCCC--CCCCceeEEEeCCCcEEE
Q 046746 427 VMDAT-YKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNP-------DK-RKSYNL--IDAVSRYTIQVFPNCWAA 495 (561)
Q Consensus 427 ~~~~~-~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~-------~~-~~~~n~--~~P~~rDTv~vp~~g~~~ 495 (561)
.+.++ .|+.|.++|.|.+..+|.+=+| .+-++..+. ... .. ...+-. ..+...-|..|.||+...
T Consensus 19 ~i~V~~~ge~v~i~~~N~g~~pH~~~~h--n~vi~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~~ 94 (128)
T d1nwpa_ 19 DIAIDKSCKTFTVELTHSGSLPKNVMGH--NLVISKEAD--MQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDS 94 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCB--CCEEEEGGG--HHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEEEecCCcEEEEEEEeCCccccceeee--cccccccch--hHHHHHHHHhhhccccCCCCCchhheeecccccCCCceE
Confidence 46674 5999999999999999998544 454444321 100 00 011111 223556788899999999
Q ss_pred EEEEe---CCcceeeeecccchhhhccceEEEEEe
Q 046746 496 ILVSM---DNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 496 irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|.|.+ +.||.|.|=|=+--|+ .||-..+.|+
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 95 VTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 99998 4789999999999999 8999998873
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=94.42 E-value=0.05 Score=44.00 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=28.5
Q ss_pred EEEEeCCcceeeeecccchhhhccceEEEEEecCCc
Q 046746 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKR 531 (561)
Q Consensus 496 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 531 (561)
+.+.++.||.|-|+|.. |...||...+.|++...
T Consensus 64 ~s~Tf~~~G~Y~Y~C~p--H~~~GM~G~IvVgd~~~ 97 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCTP--HYGMGMVGVVQVGDAPA 97 (124)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSSCT
T ss_pred EEEecCCCceEEEEecc--CcCCCCEEEEEECCCCC
Confidence 45677899999999974 99999999999976543
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=94.39 E-value=0.0044 Score=48.63 Aligned_cols=31 Identities=10% Similarity=0.178 Sum_probs=26.0
Q ss_pred EEEEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 495 AILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 495 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
...+.++.||.|.|+|.. |...||-..+.|+
T Consensus 72 ~~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 72 SFKAKVSTPGTYTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEEECCCSCEEEEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeeCCCceEEEEecC--CcccCCeEEEEEC
Confidence 445566889999999985 9999999999884
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=94.35 E-value=0.079 Score=43.09 Aligned_cols=96 Identities=6% Similarity=-0.117 Sum_probs=64.7
Q ss_pred EEec-CCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCc--------CCCCCC-CCCC-CCceeEEEeCCCcEEE
Q 046746 427 VMDA-TYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNP--------DKRKSY-NLID-AVSRYTIQVFPNCWAA 495 (561)
Q Consensus 427 ~~~~-~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~-n~~~-P~~rDTv~vp~~g~~~ 495 (561)
-+.+ +.|+.|+++|.|.+...|-+=. |.|-++..+. ... .....+ ...+ -..--|..|.||+...
T Consensus 19 ~i~V~k~G~~V~l~~~N~g~l~h~~m~--hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~~ 94 (129)
T d2ccwa1 19 EIVVDKSCKQFTMHLKHVGKMAKVAMG--HNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHC--BCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEEEecCCCEEEEEEEcCCcCchheee--ccccccCccc--HHHHHHHHHHhhhccccCCCccccccccccccCCCceEE
Confidence 4667 6899999999999987755433 3554544321 100 000001 0111 1223477889999999
Q ss_pred EEEEe---CCcceeeeecccchhhhccceEEEEEe
Q 046746 496 ILVSM---DNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 496 irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
|-|++ +.||.|.|=|=+--|+ .||-..++|.
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 95 VTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 99998 4799999999999998 7999999884
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=94.34 E-value=0.049 Score=41.93 Aligned_cols=37 Identities=8% Similarity=0.157 Sum_probs=28.6
Q ss_pred EeCCCcEEEEEEEeCCcceeeeecccchhhhccceEEEEEe
Q 046746 487 QVFPNCWAAILVSMDNAGMWNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 487 ~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 527 (561)
...++.+ +.+.++.||.+.|+|-. |...||-..+.|+
T Consensus 62 ~~~~~~~--~~~~f~~~G~y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d1iuza_ 62 LNSKGET--VVRKLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp ECSTTCE--EEEECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred ccCCCcE--EEEecCCCceEEEEeCC--CccCCCeEEEEEC
Confidence 3344444 45667899999999964 9999999999884
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=94.29 E-value=0.061 Score=43.40 Aligned_cols=35 Identities=9% Similarity=0.162 Sum_probs=29.0
Q ss_pred EEEEeCCcceeeeecccchhhhccceEEEEEecCCcc
Q 046746 496 ILVSMDNAGMWNLRSNIWERNYLGQQLYLSVRLHKRS 532 (561)
Q Consensus 496 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~ 532 (561)
+.+.++.+|.|-|+|=+ |...||...+.|+++...
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~~~~~ 98 (123)
T d1adwa_ 64 YTLTVTEPGLYGVKCTP--HFGMGMVGLVQVGDAPEN 98 (123)
T ss_dssp EEEEECSCEEEEEECGG--GGGGTCEEEEEESSSCTT
T ss_pred eEEeccCCCeEEEEEcc--CCCCCCEEEEEECCCCCC
Confidence 35667899999999965 999999999999876543
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=94.12 E-value=0.016 Score=45.40 Aligned_cols=84 Identities=12% Similarity=0.081 Sum_probs=53.7
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEe-CCcce
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSM-DNAGM 505 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~a-dnpG~ 505 (561)
.+.++.|++|.| .|.+...|-..+. ..+.. .. . .....-...+.....++....+.|.+ +.||.
T Consensus 20 ~i~v~~GdtV~f--~n~~~~~h~~~~~-------~~~~~--~~-~---~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~ 84 (105)
T d2cj3a1 20 KLTIKPGDTVEF--LNNKVPPHNVVFD-------AALNP--AK-S---ADLAKSLSHKQLLMSPGQSTSTTFPADAPAGE 84 (105)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEEC-------SSSST--TC-C---HHHHHHHCEEEEECSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEE--EECCCCceeeEec-------cCCCC--cc-c---cccCCcccccccccCCCcceEEEEEeccCCce
Confidence 477899999888 4554444433322 11100 00 0 00000123467777788888888875 67999
Q ss_pred eeeecccchhhhccceEEEEEe
Q 046746 506 WNLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V~ 527 (561)
+.|+|-. |...||-..+.|.
T Consensus 85 y~y~C~~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 85 YTFYCEP--HRGAGMVGKITVA 104 (105)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CcCCCcEEEEEEe
Confidence 9999964 9999999999885
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=93.87 E-value=0.049 Score=42.03 Aligned_cols=82 Identities=12% Similarity=0.091 Sum_probs=46.5
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCcce
Q 046746 426 NVMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGM 505 (561)
Q Consensus 426 ~~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~ 505 (561)
..+.++.|++|.| .|.+...|-+....... ..+ ...... . ...+.....++.. +.+.++.||.
T Consensus 17 ~~i~v~~GdtV~f--~n~~~~~h~~~~~~~~~-----~~~-~~~~~~-~------~~~~~~~~~~~~~--~~~tf~~~G~ 79 (99)
T d1bypa_ 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEV-----PAG-VDVTKI-S------MPEEDLLNAPGEE--YSVTLTEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSS-----CTT-CCHHHH-S------CCTTCCBCSTTCE--EEEEECSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceeEEEecCCC-----CCc-cccccC-c------ccccccccCCCce--EEEEecCCce
Confidence 3578999999888 56655555443221110 000 000000 0 0112222333444 4556689999
Q ss_pred eeeecccchhhhccceEEEEE
Q 046746 506 WNLRSNIWERNYLGQQLYLSV 526 (561)
Q Consensus 506 w~~HCHil~H~d~GMm~~~~V 526 (561)
+-|+|- .|...||-..+.|
T Consensus 80 y~y~C~--~H~~~GM~G~I~V 98 (99)
T d1bypa_ 80 YKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEEC--cCCCCCCEEEEEE
Confidence 999996 4999999998877
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=91.83 E-value=0.25 Score=38.35 Aligned_cols=72 Identities=7% Similarity=-0.076 Sum_probs=44.3
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
.+.++.|++|.| .|.+...|.+-... +.. +. ..-|.-.+.++.. ..+.++.||.+
T Consensus 35 ~i~V~~GdtV~f--~N~d~~~H~v~~~~----------~~~-~~----------~~f~s~~~~~~~~--~~~tf~~~G~y 89 (106)
T d1id2a_ 35 EVTIKAGETVYW--VNGEVMPHNVAFKK----------GIV-GE----------DAFRGEMMTKDQA--YAITFNEAGSY 89 (106)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECT----------TTS-SS----------SCEECCCBCTTEE--EEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEecc----------ccC-Cc----------ccccccccCCCce--EEEecCCCeEE
Confidence 467889999877 67776667543221 100 00 0012222333443 45677899999
Q ss_pred eeecccchhhhccceEEEEEe
Q 046746 507 NLRSNIWERNYLGQQLYLSVR 527 (561)
Q Consensus 507 ~~HCHil~H~d~GMm~~~~V~ 527 (561)
.|+|=+ | .||...+.|+
T Consensus 90 ~y~C~~--H--~~M~G~I~Ve 106 (106)
T d1id2a_ 90 DYFCTP--H--PFMRGKVIVE 106 (106)
T ss_dssp EEECSS--C--TTCEEEEEEC
T ss_pred EEEccC--C--CCCEEEEEEC
Confidence 999976 6 5999998874
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=88.56 E-value=0.28 Score=41.06 Aligned_cols=79 Identities=8% Similarity=0.057 Sum_probs=53.8
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEeecCCCCCcCCCCCCCCCCCCceeEEEeCCCcEEEEEEEeCCccee
Q 046746 427 VMDATYKAFMEIVLENRQNTMQSWILDGYAFFAVGMEPGTWNPDKRKSYNLIDAVSRYTIQVFPNCWAAILVSMDNAGMW 506 (561)
Q Consensus 427 ~~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~n~~~P~~rDTv~vp~~g~~~irf~adnpG~w 506 (561)
-+.++.|+.|++.+.+.+- .| .|+|-.. +=-..+.||....+.|.+|.||.|
T Consensus 28 ~l~lP~g~pV~~~ltS~DV-iH-------sF~vP~l--------------------~~k~daiPG~~~~~~~~~~~~G~y 79 (158)
T d1cyxa_ 28 EIAFPANTPVYFKVTSNSV-MH-------SFFIPRL--------------------GSQIYAMAGMQTRLHLIANEPGTY 79 (158)
T ss_dssp EEEEETTSCEEEEEEESSS-CE-------EEEEGGG--------------------TEEEEECTTCCEEEEECCSSSEEE
T ss_pred eEEeeCCCeEEEEEEcCCc-ch-------hhhhhhc--------------------ceeeccCCCceeeeeeeecCCCcE
Confidence 4678999999999998754 34 4555221 122345678889999999999999
Q ss_pred eeecccchhh-hccceEEEEEecCCccc
Q 046746 507 NLRSNIWERN-YLGQQLYLSVRLHKRSL 533 (561)
Q Consensus 507 ~~HCHil~H~-d~GMm~~~~V~~~~~~~ 533 (561)
...|...--. |..|...+.|...++.+
T Consensus 80 ~g~Cae~CG~gH~~M~~~v~vv~~~~~f 107 (158)
T d1cyxa_ 80 DGICAEICGPGHSGMKFKAIATPDRAAF 107 (158)
T ss_dssp EEEECSCCSTTSTTCCEEEEEESSHHHH
T ss_pred EEEchhhcCcccccCceEEEEECCHHHH
Confidence 9999987544 34555555555433334
|
| >d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: E-set domains of sugar-utilizing enzymes domain: Sialidase, "linker" domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=80.84 E-value=6.4 Score=29.71 Aligned_cols=70 Identities=16% Similarity=0.106 Sum_probs=46.5
Q ss_pred ceEEEEcCCEE--EEEEEEcCCCce--EEEEEeCcccEEEeecCcccceeeeeeEEEcccceEEEEEEeCC----CCCce
Q 046746 215 PLFTMKAGKVY--KYRICNVGVKTS--LNFRIQGHTMKLVEMEGSHVVQNEYESLDVHVGQCFTVLVTANQ----DPKDY 286 (561)
Q Consensus 215 p~~~v~~G~~~--rlRliN~~~~~~--~~~~i~gh~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~----~~g~y 286 (561)
|.+.+++|+.+ .+++-|.+.... ..+.+..=.=| .++ ...+.|.|||..++-++..- .+|.|
T Consensus 9 p~~~v~pG~~~~~~vtVtN~g~~~~~~~~~~~~~P~GW-------~v~---~~~~~L~pG~s~~~~~~Vt~p~~a~~G~Y 78 (103)
T d1w8oa1 9 PDVALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDW-------QVQ---GSVEPLMPGRQAKGQVTITVPAGTTPGRY 78 (103)
T ss_dssp CCEEECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTS-------EEE---EEECCBCTTCEEEEEEEEECCTTCCCEEE
T ss_pred cceeeCCCCeEEEEEEEEeCCCCceeeeeEEEcCCCCc-------ccc---CcceeeCCCCcEEEEEEEECCCCCCCceE
Confidence 77899999864 788999987653 24444322112 112 22345899999998887642 46999
Q ss_pred EEEEEeec
Q 046746 287 YLIASTRF 294 (561)
Q Consensus 287 ~i~~~~~~ 294 (561)
.+.+....
T Consensus 79 ~i~~~a~~ 86 (103)
T d1w8oa1 79 RVGATLRT 86 (103)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99887543
|