Citrus Sinensis ID: 046768
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 314 | ||||||
| 79343989 | 813 | phosphate transporter PHO1-3 [Arabidopsi | 0.738 | 0.285 | 0.580 | 1e-89 | |
| 41079256 | 813 | PHO1-like protein [Arabidopsis thaliana] | 0.738 | 0.285 | 0.580 | 1e-89 | |
| 8778399 | 841 | F16A14.26 [Arabidopsis thaliana] | 0.738 | 0.275 | 0.580 | 1e-89 | |
| 359497531 | 797 | PREDICTED: phosphate transporter PHO1 ho | 0.710 | 0.279 | 0.589 | 2e-88 | |
| 296084762 | 737 | unnamed protein product [Vitis vinifera] | 0.710 | 0.302 | 0.589 | 8e-88 | |
| 240254432 | 823 | phosphate transporter PHO1-5 [Arabidopsi | 0.742 | 0.283 | 0.564 | 1e-87 | |
| 224101393 | 795 | pho1-like protein [Populus trichocarpa] | 0.710 | 0.280 | 0.586 | 3e-87 | |
| 3548806 | 776 | unknown protein [Arabidopsis thaliana] | 0.742 | 0.300 | 0.561 | 5e-87 | |
| 356577322 | 795 | PREDICTED: phosphate transporter PHO1 ho | 0.713 | 0.281 | 0.584 | 6e-87 | |
| 41079269 | 823 | PHO1-like protein [Arabidopsis thaliana] | 0.742 | 0.283 | 0.561 | 7e-87 |
| >gi|79343989|ref|NP_172857.2| phosphate transporter PHO1-3 [Arabidopsis thaliana] gi|306756302|sp|Q6R8G7.2|PHO13_ARATH RecName: Full=Phosphate transporter PHO1 homolog 3; AltName: Full=Protein PHO1 homolog 3; Short=AtPHO1;H3 gi|332190980|gb|AEE29101.1| phosphate transporter PHO1-3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/303 (58%), Positives = 197/303 (65%), Gaps = 71/303 (23%)
Query: 48 LFAMLFLPFNILYRSSRFFFLTCLFHCIAVPLYKVTIPDFFLADQFTSQT---------- 97
+F +L LPFN YRSSRFFFLTCLFHC+A PLYKVT+PDFFL DQ TSQ
Sbjct: 543 MFIVLVLPFNYFYRSSRFFFLTCLFHCLAAPLYKVTLPDFFLGDQLTSQVQAIRSIEFYI 602
Query: 98 -----------------SSVYQTFNFIVAVIPHKSRLLQCLRLLFEEKYPMQGYNGLKYF 140
S VY TF FIVAVIP+ SRLLQCLR LFEEK P QGYNGLKYF
Sbjct: 603 CYYGWGDFRHRKSTCKESDVYNTFFFIVAVIPYVSRLLQCLRRLFEEKNPEQGYNGLKYF 662
Query: 141 LTIVAVCMRTALSLNGVGGLGWKIIAWIFS----------DIVFDWGLLNWHSKNCWLRD 190
LTIVAVC+RTA S+ G + W+++A +FS D V DWGLLN SKN WLRD
Sbjct: 663 LTIVAVCLRTAYSIQK-GQVAWRVLAAVFSFIAAIFCTYWDFVHDWGLLNRTSKNRWLRD 721
Query: 191 KLLVPHKSVYFIGMVSNNKTYMKSPSRLRVSKAVVVISDNSLIVKLQDLNALLRFAWLQN 250
KLLVP K VYFI MV LN LLRFAW+Q
Sbjct: 722 KLLVPQKKVYFIAMV---------------------------------LNVLLRFAWIQT 748
Query: 251 VLNFNFTFLHRNTMITIVASLEIIRRSIWNFFRLENEHLSNVGKYRAFKSVPLPFNDDED 310
VL+FNF+F+HR TM+ IVASLEIIRR IWNFFRLENEHL+NVGKYRAFKSVPLPFN DED
Sbjct: 749 VLDFNFSFMHRQTMVAIVASLEIIRRGIWNFFRLENEHLNNVGKYRAFKSVPLPFNYDED 808
Query: 311 EEE 313
+++
Sbjct: 809 DDK 811
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|41079256|gb|AAR99485.1| PHO1-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|8778399|gb|AAF79407.1|AC068197_17 F16A14.26 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|359497531|ref|XP_003635556.1| PREDICTED: phosphate transporter PHO1 homolog 3-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296084762|emb|CBI25905.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|240254432|ref|NP_178423.5| phosphate transporter PHO1-5 [Arabidopsis thaliana] gi|306756300|sp|Q6R8G5.2|PHO15_ARATH RecName: Full=Phosphate transporter PHO1 homolog 5; AltName: Full=Protein PHO1 homolog 5; Short=AtPHO1;H5 gi|330250584|gb|AEC05678.1| phosphate transporter PHO1-5 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224101393|ref|XP_002312260.1| pho1-like protein [Populus trichocarpa] gi|222852080|gb|EEE89627.1| pho1-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|3548806|gb|AAC34478.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356577322|ref|XP_003556776.1| PREDICTED: phosphate transporter PHO1 homolog 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|41079269|gb|AAR99487.1| PHO1-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 314 | ||||||
| TAIR|locus:2014779 | 813 | AT1G14040 [Arabidopsis thalian | 0.359 | 0.138 | 0.645 | 1.1e-92 | |
| TAIR|locus:2056941 | 823 | AT2G03240 [Arabidopsis thalian | 0.363 | 0.138 | 0.620 | 2.7e-91 | |
| TAIR|locus:2138038 | 745 | SHB1 "AT4G25350" [Arabidopsis | 0.347 | 0.146 | 0.532 | 6e-75 | |
| TAIR|locus:2206742 | 751 | AT1G35350 [Arabidopsis thalian | 0.372 | 0.155 | 0.592 | 1.1e-68 | |
| TAIR|locus:2200575 | 750 | AT1G26730 [Arabidopsis thalian | 0.359 | 0.150 | 0.579 | 6.5e-66 | |
| TAIR|locus:2007156 | 777 | AT1G69480 "AT1G69480" [Arabido | 0.375 | 0.151 | 0.530 | 1.7e-57 | |
| TAIR|locus:2056911 | 807 | AT2G03260 [Arabidopsis thalian | 0.799 | 0.311 | 0.416 | 2.3e-50 | |
| TAIR|locus:2056926 | 756 | AT2G03250 [Arabidopsis thalian | 0.334 | 0.138 | 0.544 | 6.6e-47 | |
| TAIR|locus:2092783 | 800 | AT3G29060 [Arabidopsis thalian | 0.312 | 0.122 | 0.528 | 4.4e-42 | |
| TAIR|locus:2012458 | 784 | PHO1;H1 "AT1G68740" [Arabidops | 0.235 | 0.094 | 0.527 | 2.6e-36 |
| TAIR|locus:2014779 AT1G14040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 374 (136.7 bits), Expect = 1.1e-92, Sum P(4) = 1.1e-92
Identities = 80/124 (64%), Positives = 89/124 (71%)
Query: 94 TSQTSSVYQTFNFIVAVIPHKSRLLQCLRLLFEEKYPMQGYNGLKYFLTIVAVCMRTALS 153
T + S VY TF FIVAVIP+ SRLLQCLR LFEEK P QGYNGLKYFLTIVAVC+RTA S
Sbjct: 616 TCKESDVYNTFFFIVAVIPYVSRLLQCLRRLFEEKNPEQGYNGLKYFLTIVAVCLRTAYS 675
Query: 154 LNGVGGLGWKIIAWIFS----------DIVFDWGLLNWHSKNCWLRDKLLVPHKSVYFIG 203
+ G + W+++A +FS D V DWGLLN SKN WLRDKLLVP K VYFI
Sbjct: 676 IQK-GQVAWRVLAAVFSFIAAIFCTYWDFVHDWGLLNRTSKNRWLRDKLLVPQKKVYFIA 734
Query: 204 MVSN 207
MV N
Sbjct: 735 MVLN 738
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| TAIR|locus:2056941 AT2G03240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2138038 SHB1 "AT4G25350" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2206742 AT1G35350 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2200575 AT1G26730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2007156 AT1G69480 "AT1G69480" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2056911 AT2G03260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2056926 AT2G03250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2092783 AT3G29060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2012458 PHO1;H1 "AT1G68740" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 314 | |||
| pfam03124 | 337 | pfam03124, EXS, EXS family | 2e-52 | |
| COG5409 | 384 | COG5409, COG5409, EXS domain-containing protein [S | 7e-13 |
| >gnl|CDD|217378 pfam03124, EXS, EXS family | Back alignment and domain information |
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Score = 175 bits (445), Expect = 2e-52
Identities = 94/280 (33%), Positives = 120/280 (42%), Gaps = 70/280 (25%)
Query: 47 LLFAMLFLPFNILYRSSRFFFLTCLFHCIAVPLYKVTIPDFFLADQFTSQT--------- 97
++ +LFLPFNI YRS RF+ L LF + P Y V DFFLADQ TS
Sbjct: 92 IVLLILFLPFNIFYRSGRFWLLRTLFRILLAPFYPVKFRDFFLADQLTSLVKVLADLEYT 151
Query: 98 ---------------SSVYQTFNFIVAVIPHKSRLLQCLRLLFEEKY-PMQGYNGLKYFL 141
S IVA +P+ R LQCLR + N LKY
Sbjct: 152 VCYYFNNGDSSDNTCGSSKVYVLPIVACLPYWIRFLQCLRRYRDTGDAFPHLANALKYST 211
Query: 142 TIVAVCMRTALSLNGVGGLGWKIIAWIFS----------DIVFDWGLLN-WHSKNCWLRD 190
I V + T L ++I+ +FS D+ DWGL SKN +LRD
Sbjct: 212 AIPVVVLST-LYRKYNTSDAYRILWIVFSIINSIYSFYWDVKMDWGLFQKNSSKNRFLRD 270
Query: 191 KLLVPHKSVYFIGMVSNNKTYMKSPSRLRVSKAVVVISDNSLIVKLQDLNALLRFAWLQN 250
KLL P K VY+ +V L+ +LRFAWL
Sbjct: 271 KLLYPRKWVYYFAIV---------------------------------LDLILRFAWLLT 297
Query: 251 VLNFNFTFLHRNTMITIVASLEIIRRSIWNFFRLENEHLS 290
V + H + ++A LEIIRR IWNFFR+ENEH++
Sbjct: 298 VSPLQHSIQHSELGVFLLALLEIIRRFIWNFFRVENEHVN 337
|
We have named this region the EXS family after (ERD1, XPR1, and SYG1). This family includes C-terminus portions from the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be murine leukaemia virus (MLV) receptors (XPR1). N-terminus portions from these proteins are aligned in the SPX pfam03105 family. The previously noted similarity between SYG1 and MLV receptors over their whole sequences is thus borne out in pfam03105 and this family. While the N-termini aligned in pfam03105 are thought to be involved in signal transduction, the role of the C-terminus sequences aligned in this family is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) yeast proteins. ERD1 proteins are involved in the localisation of endogenous endoplasmic reticulum (ER) proteins. erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localisation label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles. Length = 337 |
| >gnl|CDD|227696 COG5409, COG5409, EXS domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 314 | |||
| KOG1162 | 617 | consensus Predicted small molecule transporter [In | 100.0 | |
| PF03124 | 345 | EXS: EXS family; InterPro: IPR004342 The EXS domai | 100.0 | |
| COG5409 | 384 | EXS domain-containing protein [Signal transduction | 100.0 | |
| KOG1161 | 310 | consensus Protein involved in vacuolar polyphospha | 82.25 |
| >KOG1162 consensus Predicted small molecule transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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Probab=100.00 E-value=1.9e-71 Score=565.60 Aligned_cols=229 Identities=49% Similarity=0.781 Sum_probs=205.5
Q ss_pred HHHhhcccccchhhHHHHHHHhhHhhccCceeeecchhhhhhcccccccch--------------------------hhh
Q 046768 50 AMLFLPFNILYRSSRFFFLTCLFHCIAVPLYKVTIPDFFLADQFTSQTSSV--------------------------YQT 103 (314)
Q Consensus 50 ~~l~~P~~i~~~~~R~~~l~~l~r~l~~p~~~V~F~DfflaD~ltSls~~~--------------------------~~~ 103 (314)
+++++|++++|+++|+|+++++.||+++|+++|.|.|||+|||+||++.++ +..
T Consensus 351 ~~L~~Pf~~fY~sSRf~ll~~l~rvi~spl~~V~~~DFfl~Dql~S~v~a~~~l~~~~C~y~~~~~~~~~~~~~~~~~~~ 430 (617)
T KOG1162|consen 351 FLLVCPFNTFYRSSRFWLLKRLFRVLSSPLYKVLFVDFFLADQLTSLVLALRDLEFFICYYGTGDFQARRTCYCKDDYIE 430 (617)
T ss_pred heeeccchhhhHhhHHHHHHHHHHHHhccceeeccccccHHHHHHHHHHHHHhHHHhheeecccccccccccccccchHH
Confidence 457889999999999999999999999999999999999999999995421 345
Q ss_pred HhHHHhHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHHHHHHHHHHHHhhcCCC---Cchhhhhhhhhh------hhhh
Q 046768 104 FNFIVAVIPHKSRLLQCLRLLFEEKYPMQGYNGLKYFLTIVAVCMRTALSLNGVG---GLGWKIIAWIFS------DIVF 174 (314)
Q Consensus 104 ~~~ii~~lP~~iR~~QCLrry~dt~~~~hL~Na~KY~sa~~~v~~~~~~~~~~~~---~~~W~~~~~i~S------Dv~m 174 (314)
+.++++++|+++|++||+|||.|++..+||+||+||++++++++++++|+.+..+ ...|++++.++| |++|
T Consensus 431 ~~~iva~lP~~~RfLQClRR~~d~~~~~hL~NAlKY~~~i~~v~~~~~y~~~~~~~~~~~l~~~~s~vaS~y~~~WDvv~ 510 (617)
T KOG1162|consen 431 FQSIVAVLPYWFRFLQCLRRYRDEKAFPHLLNALKYSTTILAVMLTTLYRILPGSSLWFALWILSSKVASLYTTYWDVVM 510 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHhe
Confidence 7889999999999999999999998899999999999999999999999887643 246777777777 9999
Q ss_pred hccCccCCCCCccCCcccccCCCceEEEEEEEcCCCCCCCcccccccceeEEeccchhhhhhcccceeeehhhhhhhhcc
Q 046768 175 DWGLLNWHSKNCWLRDKLLVPHKSVYFIGMVSNNKTYMKSPSRLRVSKAVVVISDNSLIVKLQDLNALLRFAWLQNVLNF 254 (314)
Q Consensus 175 DWgLl~~~s~~~~LR~~l~y~~~~~Yy~aiv~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~NliLRf~W~~~l~~~ 254 (314)
||||++++++ +|||++++||++++||+||+. |++||++|++.++..
T Consensus 511 DWgLl~~~~~-~~lRd~l~~p~k~vYy~aiv~---------------------------------N~vLR~aW~~~~i~~ 556 (617)
T KOG1162|consen 511 DWGLLNRKSK-PWLRDNLLYPQKWVYYSAIVL---------------------------------NFVLRFAWFFKTILV 556 (617)
T ss_pred ecccccccCc-hhhHHHhcccchheehhHHHH---------------------------------HHHHHHHHHHHHHHH
Confidence 9999999998 999999999999999999999 999999998887754
Q ss_pred ccccccchhHHHHHHHHHHHhhhceeeeeehhhhhhccCCceecccccCCCCCCCCcc
Q 046768 255 NFTFLHRNTMITIVASLEIIRRSIWNFFRLENEHLSNVGKYRAFKSVPLPFNDDEDEE 312 (314)
Q Consensus 255 ~~~~~~~~~~~~il~~lEI~RR~iWnffRvEnEhi~N~~~~ra~~~iplp~~~~~d~~ 312 (314)
.+....++.++++++.+||+||++||||||||||+||||+|||+++||+|++.++++|
T Consensus 557 ~~~~~~~~~~~~i~a~LEIiRRfiWnfFRLEnEhlnN~g~fRa~~~v~l~~~~~~~~d 614 (617)
T KOG1162|consen 557 FHEEFLSDSMVFIMALLEIIRRFIWNFFRLENEHLNNVGKFRAFRDVPLPFSYMDESD 614 (617)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhccccccCCchhhhccccc
Confidence 4322227889999999999999999999999999999999999999999988777665
|
|
| >PF03124 EXS: EXS family; InterPro: IPR004342 The EXS domain is named after ERD1/XPR1/SYG1 and proteins containing this motif include the C-terminal of the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be Murine leukemia virus (MLV) receptors (XPR1 | Back alignment and domain information |
|---|
| >COG5409 EXS domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1161 consensus Protein involved in vacuolar polyphosphate accumulation, contains SPX domain [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 314 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-06
Identities = 40/260 (15%), Positives = 84/260 (32%), Gaps = 53/260 (20%)
Query: 87 FFLADQFTSQTSSVYQTF---------NFIVAVIPHKSRLLQCLRLLFEEKY-PMQGYNG 136
L S+ + Q F F+++ I + R + ++ E+ + N
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 137 L--KYFLTIV--AVCMRTALS---------LNGVGGLGWKIIAWIFSDIVFDWGLLN--- 180
+ KY ++ + + +R AL ++GV G G K W+ D+ + +
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG-K--TWVALDVCLSYKVQCKMD 181
Query: 181 ----W-HSKNCWLRDKLLVPHKSVYFIGMVSNNKTYMKSPSRLRVSKAVVVISDNSLIVK 235
W + KNC + +L + + + + N + S +++ + L+
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQ-IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 236 LQDLNAL--LRFAWLQNVLN-FNFTFLHRNTMITIVASLEIIRRSIWNFFRLENEHLSNV 292
N L L N FN ++T R L +++
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNL---SCKILLTT--------RFKQVTDFLSAATTTHI 289
Query: 293 GKYRAFKSVPLPFNDDEDEE 312
+ + DE +
Sbjct: 290 ----SLDHHSMTLTPDEVKS 305
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00