Citrus Sinensis ID: 046789

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
MSSDPLPPLPENRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALGARTSLPHRTDPRLASFL
cccccccccccccEEEEccccHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHcccccccEEEccccccccEEEEEccccccEEEEEcccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHcccEEEEcccccHHHcccccHHHHHHHHHHccccccEEEEEcccccEEEEEcccccccccccccHHHHHHHHHHHccccccccccccccHHHHccccEEEEEcEEEEcccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccccccc
ccccccccccccEEEEccccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHccccccEEEEEccccccEEEEEEEcccccEEEEEccccccccHHHHHHHHHHHHHccEEEEEEEcccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHccEEEEccHHHHHHcccccHHHHHHHHHHHcccccEEEEEEccccEEEEEccccccccccHccHHHHHHHHHHcccccccEcEEccccEEEEEEccccccccEEEEEcccccccccEEccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccHHHcc
mssdplpplpenrivvqgggnagnALTCAArlglnpriiskiaddpqgkgireefeadgvdtSFLVVskegnspftYVIVDNqmktrtcihtpgdppmipddlsestIFSALDGARILyldgrlpdTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCsakfpqvwteapsvpSALVSMLLRLPNLRFAIVTLGEDGCIMLErsvnespeleeiDVDSLLEQLKQrkddraavpTCISSLETRLRaegigtvsgrlyigtaekippselvdttgagDAFIGAVLYALCanmspekmlPFAAQVAAAGCRAlgartslphrtdprlasfl
mssdplpplpENRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLvvskegnspFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAqeaarknipilidterQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLERsvnespeleEIDVDSLLEQLkqrkddraavptcissletrlraegigtvsgrlyiGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALGartslphrtdprlasfl
MSSDPLPPLPENRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALGARTSLPHRTDPRLASFL
*************IVVQGGGNAGNALTCAARLGLNPRIISKIAD******IREEFEADGVDTSFLVVSKEGNSPFTYVIVDNQMKTRTCIHTP*********LSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLER****************************AVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALG*****************
***DPLPPLPENRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALGARTSLPHRTDPRLASFL
MSSDPLPPLPENRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALGARTSLPHRTDPRLASFL
*****LPPLPENRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALGARTSLPHRTDPRL**FL
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MSSDPLPPLPENRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALGARTSLPHRTDPRLASFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query336 2.2.26 [Sep-21-2011]
Q9H477322 Ribokinase OS=Homo sapien yes no 0.803 0.838 0.228 6e-11
Q8R1Q9323 Ribokinase OS=Mus musculu yes no 0.773 0.804 0.240 1e-10
P32143298 Uncharacterized sugar kin N/A no 0.764 0.862 0.262 6e-09
P97328298 Ketohexokinase OS=Mus mus no no 0.720 0.812 0.229 8e-08
P26984307 Fructokinase OS=Salmonell N/A no 0.824 0.902 0.244 2e-07
O34768320 Uncharacterized sugar kin yes no 0.773 0.812 0.218 2e-07
Q9KAG8331 5-dehydro-2-deoxygluconok yes no 0.741 0.752 0.221 3e-06
O29891250 Uncharacterized sugar kin yes no 0.735 0.988 0.243 8e-06
Q5KYR3335 5-dehydro-2-deoxygluconok yes no 0.744 0.746 0.214 9e-06
P36945293 Ribokinase OS=Bacillus su no no 0.717 0.822 0.253 1e-05
>sp|Q9H477|RBSK_HUMAN Ribokinase OS=Homo sapiens GN=RBKS PE=1 SV=1 Back     alignment and function desciption
 Score = 68.6 bits (166), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 138/332 (41%), Gaps = 62/332 (18%)

Query: 12  NRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEG 71
           ++  +  GG   N    AARLG    ++ K+  D  G    E  + + + T F   +K+ 
Sbjct: 45  HKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDA 104

Query: 72  NSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRL-PDTAII 130
            +    +IV+N+ +    I    +  +  +DL  +   + +  A+++     + P T++ 
Sbjct: 105 ATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAA--NVISRAKVMVCQLEITPATSLE 162

Query: 131 VAQEAARKNIPILIDTERQRERID-EFLKLASYAVCSAKFPQVWTEAPSVPSAL----VS 185
               A R  +  L +       +D +F  L+    C+    ++ T   +V SA      +
Sbjct: 163 ALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILT-GLTVGSAADAGEAA 221

Query: 186 MLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCIS 245
           ++L     +  I+TLG +GC++L ++    PE + I                   PT   
Sbjct: 222 LVLLKRGCQVVIITLGAEGCVVLSQT---EPEPKHI-------------------PT--- 256

Query: 246 SLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCA--NMSPEKM 303
                                  EK+   + VDTTGAGD+F+GA+ + L    N+S E M
Sbjct: 257 -----------------------EKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLEDM 290

Query: 304 LPFAAQVAAAGCRALGARTSLPHRTDPRLASF 335
           L  +  +AA   +A G ++S P++ D  L  F
Sbjct: 291 LNRSNFIAAVSVQAAGTQSSYPYKKDLPLTLF 322

Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5
>sp|Q8R1Q9|RBSK_MOUSE Ribokinase OS=Mus musculus GN=Rbks PE=1 SV=1 Back     alignment and function description
>sp|P32143|YIHV_ECOLI Uncharacterized sugar kinase YihV OS=Escherichia coli (strain K12) GN=yihV PE=3 SV=2 Back     alignment and function description
>sp|P97328|KHK_MOUSE Ketohexokinase OS=Mus musculus GN=Khk PE=1 SV=1 Back     alignment and function description
>sp|P26984|SCRK_SALTM Fructokinase OS=Salmonella typhimurium GN=scrK PE=3 SV=1 Back     alignment and function description
>sp|O34768|YDJE_BACSU Uncharacterized sugar kinase YdjE OS=Bacillus subtilis (strain 168) GN=ydjE PE=3 SV=1 Back     alignment and function description
>sp|Q9KAG8|IOLC_BACHD 5-dehydro-2-deoxygluconokinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=iolC PE=1 SV=1 Back     alignment and function description
>sp|O29891|Y356_ARCFU Uncharacterized sugar kinase AF_0356 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0356 PE=3 SV=1 Back     alignment and function description
>sp|Q5KYR3|IOLC_GEOKA 5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus (strain HTA426) GN=iolC PE=3 SV=1 Back     alignment and function description
>sp|P36945|RBSK_BACSU Ribokinase OS=Bacillus subtilis (strain 168) GN=rbsK PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query336
255585902370 kinase, putative [Ricinus communis] gi|2 1.0 0.908 0.721 1e-144
224070011351 predicted protein [Populus trichocarpa] 0.979 0.937 0.751 1e-141
225437922367 PREDICTED: ribokinase [Vitis vinifera] g 1.0 0.915 0.691 1e-139
357510321 505 5-dehydro-2-deoxygluconokinase [Medicago 0.979 0.651 0.706 1e-137
297803194403 pfkB-type carbohydrate kinase family pro 0.979 0.816 0.689 1e-135
357510323409 Sugar kinase, putative [Medicago truncat 1.0 0.821 0.639 1e-134
356503652400 PREDICTED: LOW QUALITY PROTEIN: 5-dehydr 0.997 0.837 0.657 1e-134
18417250401 pfkB-like carbohydrate kinase family pro 0.955 0.800 0.694 1e-132
42573071403 pfkB-like carbohydrate kinase family pro 0.955 0.796 0.694 1e-132
356537230409 PREDICTED: ketohexokinase-like [Glycine 0.976 0.801 0.706 1e-132
>gi|255585902|ref|XP_002533624.1| kinase, putative [Ricinus communis] gi|223526482|gb|EEF28753.1| kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/366 (72%), Positives = 299/366 (81%), Gaps = 30/366 (8%)

Query: 1   MSSDPLPPLPENRIV------------------------------VQGGGNAGNALTCAA 30
           MS D LPP P+N +V                              VQGGGNAGNA+TCAA
Sbjct: 4   MSLDSLPPPPDNGVVLGIGGASVDFLAAVAAYPKPDDKIRSTSLKVQGGGNAGNAMTCAA 63

Query: 31  RLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTYVIVDNQMKTRTCI 90
           RLGL+PRIISKIADD QG+ + EEFE+DGVDTSFLVVSK GNSPFTYVIVD+Q KTRTCI
Sbjct: 64  RLGLSPRIISKIADDSQGRSVLEEFESDGVDTSFLVVSKGGNSPFTYVIVDSQTKTRTCI 123

Query: 91  HTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQR 150
           HTPG+PPM PDDLS+S++ SALDGA ++Y DGRLP++A++VAQEA R NIPILID ER+R
Sbjct: 124 HTPGEPPMTPDDLSQSSLLSALDGASVVYSDGRLPESALLVAQEATRSNIPILIDAERKR 183

Query: 151 ERIDEFLKLASYAVCSAKFPQVWTEAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLER 210
           E +D+ LKLASYAVCSAKFPQ WTEAPSVP ALVSMLLRLPN++F IVTLGEDGCIMLER
Sbjct: 184 EGLDDLLKLASYAVCSAKFPQAWTEAPSVPHALVSMLLRLPNIKFVIVTLGEDGCIMLER 243

Query: 211 SVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEK 270
           S+NESP  EEID+D+LLE LKQRKDD   +PTC SS   +LRA GIGTV+GRL++GTAEK
Sbjct: 244 SINESPASEEIDIDNLLELLKQRKDDSVVMPTCFSSSLAKLRANGIGTVNGRLFVGTAEK 303

Query: 271 IPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAAAGCRALGARTSLPHRTDP 330
           IPP+EL+DTTGAGDAFIGAVLYA+CA+M PEKMLPFAAQVAAA CRALGART LPHR DP
Sbjct: 304 IPPAELIDTTGAGDAFIGAVLYAICASMPPEKMLPFAAQVAAASCRALGARTGLPHRADP 363

Query: 331 RLASFL 336
           RLA FL
Sbjct: 364 RLAPFL 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224070011|ref|XP_002303101.1| predicted protein [Populus trichocarpa] gi|222844827|gb|EEE82374.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225437922|ref|XP_002268232.1| PREDICTED: ribokinase [Vitis vinifera] gi|297744253|emb|CBI37223.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357510321|ref|XP_003625449.1| 5-dehydro-2-deoxygluconokinase [Medicago truncatula] gi|355500464|gb|AES81667.1| 5-dehydro-2-deoxygluconokinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297803194|ref|XP_002869481.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315317|gb|EFH45740.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357510323|ref|XP_003625450.1| Sugar kinase, putative [Medicago truncatula] gi|355500465|gb|AES81668.1| Sugar kinase, putative [Medicago truncatula] Back     alignment and taxonomy information
>gi|356503652|ref|XP_003520620.1| PREDICTED: LOW QUALITY PROTEIN: 5-dehydro-2-deoxygluconokinase-like [Glycine max] Back     alignment and taxonomy information
>gi|18417250|ref|NP_567816.1| pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] gi|16226361|gb|AAL16146.1|AF428378_1 unknown protein [Arabidopsis thaliana] gi|21928053|gb|AAM78055.1| At4g29227 [Arabidopsis thaliana] gi|332660129|gb|AEE85529.1| pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42573071|ref|NP_974632.1| pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] gi|332660130|gb|AEE85530.1| pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356537230|ref|XP_003537132.1| PREDICTED: ketohexokinase-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query336
TAIR|locus:2149534365 AT5G43910 [Arabidopsis thalian 0.967 0.890 0.594 2.7e-100
TIGR_CMR|GSU_0692304 GSU_0692 "carbohydrate kinase, 0.449 0.496 0.326 1.1e-22
MGI|MGI:1918586323 Rbks "ribokinase" [Mus musculu 0.568 0.591 0.227 5.6e-17
UNIPROTKB|P32143298 yihV "predicted sugar kinase" 0.592 0.667 0.280 1.6e-15
RGD|1310064323 Rbks "ribokinase" [Rattus norv 0.226 0.235 0.392 6.2e-14
ZFIN|ZDB-GENE-040625-112311 rbks "ribokinase" [Danio rerio 0.622 0.672 0.224 1.4e-13
UNIPROTKB|Q9H477322 RBKS "Ribokinase" [Homo sapien 0.601 0.627 0.214 3.3e-13
UNIPROTKB|Q9KN34306 VC_A0131 "Ribokinase" [Vibrio 0.565 0.620 0.238 2.2e-12
TIGR_CMR|VC_A0131306 VC_A0131 "ribokinase" [Vibrio 0.565 0.620 0.238 2.2e-12
UNIPROTKB|F1PB12322 RBKS "Uncharacterized protein" 0.568 0.593 0.207 2.3e-12
TAIR|locus:2149534 AT5G43910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
 Identities = 199/335 (59%), Positives = 248/335 (74%)

Query:     8 PLPENRI-----VVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDT 62
             P+P+ +I      VQGGGN GNALTC ARLGL  RI++K+ADD  G+ + EE E+ GVDT
Sbjct:    33 PIPDQKIRGTSFKVQGGGNTGNALTCVARLGLPCRILAKVADDSHGRYMVEELESSGVDT 92

Query:    63 SFLVVSKEGNSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDG 122
             SF + +K+G S F YVIVDNQ  TRTCI+TPG PP++PDDL+ES +   LDG R+LY++G
Sbjct:    93 SFCMSAKDGASHFNYVIVDNQTNTRTCIYTPGYPPLLPDDLTESLLLDVLDGVRVLYVNG 152

Query:   123 RLPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSA 182
             R  +  +++AQ+A  KNIPILI+ E++R  +DE + LA YA+CS  FPQ WT APS PSA
Sbjct:   153 RSREAELLLAQKAHSKNIPILINAEKKRTGLDELIDLADYAICSTNFPQEWTGAPSSPSA 212

Query:   183 LVSMLLRLPNLRFAIVTLGEDGCIMLERSVNE-SPELEEIDVDSLLEQLKQRKDDRAAVP 241
             L+SML+RLP L+F I+TLGE GC+MLER  +E S   EE D+D L E LKQ  D  + +P
Sbjct:   213 LLSMLIRLPKLKFVIMTLGEHGCVMLERCSSEVSGSEEETDIDELHESLKQSTDFTSVLP 272

Query:   242 TCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPE 301
              C SSL TRL     G V+GRL I TAEKIP SEL+DTTGAGDAF GA+LY LC  M+ E
Sbjct:   273 VCNSSLVTRLT----GNVTGRLVIVTAEKIPSSELIDTTGAGDAFTGALLYGLCTGMALE 328

Query:   302 KMLPFAAQVAAAGCRALGARTSLPHRTDPRLASFL 336
             +ML FA++VAA  CR LGARTSLP+RTDP LA+FL
Sbjct:   329 EMLTFASRVAACCCRGLGARTSLPYRTDPNLATFL 363
GO:0004747 "ribokinase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006014 "D-ribose metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
TIGR_CMR|GSU_0692 GSU_0692 "carbohydrate kinase, PfkB family" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
MGI|MGI:1918586 Rbks "ribokinase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P32143 yihV "predicted sugar kinase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
RGD|1310064 Rbks "ribokinase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040625-112 rbks "ribokinase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H477 RBKS "Ribokinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KN34 VC_A0131 "Ribokinase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A0131 VC_A0131 "ribokinase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|F1PB12 RBKS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query336
cd01945284 cd01945, ribokinase_group_B, Ribokinase-like subgr 3e-85
pfam00294298 pfam00294, PfkB, pfkB family carbohydrate kinase 2e-35
COG0524311 COG0524, RbsK, Sugar kinases, ribokinase family [C 5e-35
cd01174292 cd01174, ribokinase, Ribokinase catalyses the phos 7e-24
cd01167295 cd01167, bac_FRK, Fructokinases (FRKs) mainly from 6e-22
cd01942279 cd01942, ribokinase_group_A, Ribokinase-like subgr 5e-21
cd01168312 cd01168, adenosine_kinase, Adenosine kinase (AK) c 5e-21
cd01166294 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg 1e-20
TIGR02152293 TIGR02152, D_ribokin_bact, ribokinase 2e-20
PTZ00292326 PTZ00292, PTZ00292, ribokinase; Provisional 3e-15
cd01941288 cd01941, YeiC_kinase_like, YeiC-like sugar kinase 6e-12
cd01172304 cd01172, RfaE_like, RfaE encodes a bifunctional AD 2e-08
cd01939290 cd01939, Ketohexokinase, Ketohexokinase (fructokin 2e-08
cd01164289 cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr 2e-07
COG1105310 COG1105, FruK, Fructose-1-phosphate kinase and rel 2e-07
PRK09434304 PRK09434, PRK09434, aminoimidazole riboside kinase 3e-07
cd01947265 cd01947, Guanosine_kinase_like, Guanosine kinase-l 4e-07
PRK09813260 PRK09813, PRK09813, fructoselysine 6-kinase; Provi 1e-06
TIGR03168303 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki 2e-06
cd01940264 cd01940, Fructoselysine_kinase_like, Fructoselysin 2e-06
cd00287196 cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup 7e-06
PLN02813426 PLN02813, PLN02813, pfkB-type carbohydrate kinase 3e-05
PRK11142306 PRK11142, PRK11142, ribokinase; Provisional 3e-05
TIGR02198315 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, 9e-05
PRK09513312 PRK09513, fruK, 1-phosphofructokinase; Provisional 2e-04
TIGR03828304 TIGR03828, pfkB, 1-phosphofructokinase 2e-04
cd01940264 cd01940, Fructoselysine_kinase_like, Fructoselysin 5e-04
PLN02323330 PLN02323, PLN02323, probable fructokinase 6e-04
cd01937254 cd01937, ribokinase_group_D, Ribokinase-like subgr 0.002
>gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B Back     alignment and domain information 
 Score =  258 bits (661), Expect = 3e-85
 Identities = 110/328 (33%), Positives = 144/328 (43%), Gaps = 72/328 (21%)

Query: 8   PLPENRIV-----VQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDT 62
           P  + +IV     V GGGNA NA    ARLG   R+I  + DD  G+ I  E  A+GVDT
Sbjct: 20  PGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGVVGDDAIGRLILAELAAEGVDT 79

Query: 63  SFLVVSKEGNSPFTYVI---VDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILY 119
           SF+VV+    SP + +     D    + T I T   P  +PD +        L GA  + 
Sbjct: 80  SFIVVAPGARSPISSITDITGDRATISITAIDTQAAPDSLPDAI--------LGGADAVL 131

Query: 120 LDGRLPDTAIIVAQEAARKNIPILIDTERQRER-IDEFLKLASYAVCSAKFPQVWTEAPS 178
           +DGR P+ A+ +AQEA  + IPI +D +    R ++E L LA +A+CS  F +  T +  
Sbjct: 132 VDGRQPEAALHLAQEARARGIPIPLDLDGGGLRVLEELLPLADHAICSENFLRPNTGSAD 191

Query: 179 VPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRA 238
                   LL    + F  VTLGE GC+ LER                            
Sbjct: 192 D---EALELLASLGIPFVAVTLGEAGCLWLER---------------------------- 220

Query: 239 AVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANM 298
                                 G L+   A    P E+VDTTGAGD F GA  +AL   M
Sbjct: 221 ---------------------DGELFHVPA---FPVEVVDTTGAGDVFHGAFAHALAEGM 256

Query: 299 SPEKMLPFAAQVAAAGCRALGARTSLPH 326
              + L FA+  AA  CR LG R  LP 
Sbjct: 257 PLREALRFASAAAALKCRGLGGRAGLPT 284

Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284
>gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase Back     alignment and domain information
>gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A Back     alignment and domain information
>gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase Back     alignment and domain information
>gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase Back     alignment and domain information
>gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>gnl|CDD|238914 cd01939, Ketohexokinase, Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases Back     alignment and domain information
>gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional Back     alignment and domain information
>gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like Back     alignment and domain information
>gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|233776 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, domain I Back     alignment and domain information
>gnl|CDD|181923 PRK09513, fruK, 1-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase Back     alignment and domain information
>gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like Back     alignment and domain information
>gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase Back     alignment and domain information
>gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 336
PRK11142306 ribokinase; Provisional 100.0
PTZ00292326 ribokinase; Provisional 100.0
cd01174292 ribokinase Ribokinase catalyses the phosphorylatio 100.0
PLN02967581 kinase 100.0
cd01945284 ribokinase_group_B Ribokinase-like subgroup B. Fou 100.0
TIGR02152293 D_ribokin_bact ribokinase. This model describes ri 100.0
PLN02341470 pfkB-type carbohydrate kinase family protein 100.0
cd01939290 Ketohexokinase Ketohexokinase (fructokinase, KHK) 100.0
PLN02323330 probable fructokinase 100.0
PRK09434304 aminoimidazole riboside kinase; Provisional 100.0
PLN02543496 pfkB-type carbohydrate kinase family protein 100.0
PLN02813426 pfkB-type carbohydrate kinase family protein 100.0
PRK09850313 pseudouridine kinase; Provisional 100.0
cd01168312 adenosine_kinase Adenosine kinase (AK) catalyzes t 100.0
COG0524311 RbsK Sugar kinases, ribokinase family [Carbohydrat 100.0
PRK15074434 inosine/guanosine kinase; Provisional 100.0
PTZ00247345 adenosine kinase; Provisional 100.0
TIGR03828304 pfkB 1-phosphofructokinase. This enzyme acts in co 100.0
KOG2855330 consensus Ribokinase [Carbohydrate transport and m 100.0
cd01942279 ribokinase_group_A Ribokinase-like subgroup A. Fou 100.0
cd01166294 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho 100.0
cd01944289 YegV_kinase_like YegV-like sugar kinase. Found onl 100.0
PLN02379367 pfkB-type carbohydrate kinase family protein 100.0
cd01167295 bac_FRK Fructokinases (FRKs) mainly from bacteria 100.0
PRK09954362 putative kinase; Provisional 100.0
cd01940264 Fructoselysine_kinase_like Fructoselysine kinase-l 100.0
PLN02548332 adenosine kinase 100.0
TIGR02198315 rfaE_dom_I rfaE bifunctional protein, domain I. Rf 100.0
PRK10294309 6-phosphofructokinase 2; Provisional 100.0
PF00294301 PfkB: pfkB family carbohydrate kinase; InterPro: I 100.0
TIGR03168303 1-PFK hexose kinase, 1-phosphofructokinase family. 100.0
cd01943328 MAK32 MAK32 kinase. MAK32 is a protein found prima 100.0
cd01172304 RfaE_like RfaE encodes a bifunctional ADP-heptose 100.0
cd01164289 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 100.0
PRK13508309 tagatose-6-phosphate kinase; Provisional 100.0
cd01947265 Guanosine_kinase_like Guanosine kinase-like sugar 100.0
cd01941288 YeiC_kinase_like YeiC-like sugar kinase. Found in 100.0
PRK09513312 fruK 1-phosphofructokinase; Provisional 100.0
COG1105310 FruK Fructose-1-phosphate kinase and related fruct 100.0
TIGR01231309 lacC tagatose-6-phosphate kinase. This enzyme is p 100.0
PRK09813260 fructoselysine 6-kinase; Provisional 100.0
PRK11316 473 bifunctional heptose 7-phosphate kinase/heptose 1- 100.0
cd01946277 ribokinase_group_C Ribokinase-like subgroup C. Fou 100.0
KOG2854343 consensus Possible pfkB family carbohydrate kinase 99.97
cd01937254 ribokinase_group_D Ribokinase-like subgroup D. Fou 99.97
PLN02630335 pfkB-type carbohydrate kinase family protein 99.97
KOG2947308 consensus Carbohydrate kinase [Carbohydrate transp 99.97
COG2870 467 RfaE ADP-heptose synthase, bifunctional sugar kina 99.95
cd00287196 ribokinase_pfkB_like ribokinase/pfkB superfamily: 99.89
cd01173254 pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla 99.65
PRK12413253 phosphomethylpyrimidine kinase; Provisional 99.61
PRK05756286 pyridoxamine kinase; Validated 99.57
PRK12412268 pyridoxal kinase; Reviewed 99.57
TIGR00687286 pyridox_kin pyridoxal kinase. ThiD and related pro 99.56
PRK07105284 pyridoxamine kinase; Validated 99.56
cd01169242 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim 99.56
TIGR00097254 HMP-P_kinase phosphomethylpyrimidine kinase. This 99.55
PRK08573 448 phosphomethylpyrimidine kinase; Provisional 99.54
PRK06427266 bifunctional hydroxy-methylpyrimidine kinase/ hydr 99.51
PRK08176281 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy 99.51
PRK12616270 pyridoxal kinase; Reviewed 99.42
PTZ00344296 pyridoxal kinase; Provisional 99.39
KOG3009614 consensus Predicted carbohydrate kinase, contains 99.36
cd01171254 YXKO-related B.subtilis YXKO protein of unknown fu 99.25
PTZ00347504 phosphomethylpyrimidine kinase; Provisional 99.24
PLN02898 502 HMP-P kinase/thiamin-monophosphate pyrophosphoryla 99.22
TIGR00196272 yjeF_cterm yjeF C-terminal region, hydroxyethylthi 99.08
PRK09517 755 multifunctional thiamine-phosphate pyrophosphoryla 99.04
PRK14713 530 multifunctional hydroxymethylpyrimidine phosphokin 99.02
PLN02978308 pyridoxal kinase 99.01
PF08543246 Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte 98.99
COG0351263 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi 98.92
cd01170242 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T 98.92
COG2240281 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe 98.88
PRK09355263 hydroxyethylthiazole kinase; Validated 98.59
PTZ00493321 phosphomethylpyrimidine kinase; Provisional 98.5
TIGR00694249 thiM hydroxyethylthiazole kinase. This model repre 98.39
PRK14039453 ADP-dependent glucokinase; Provisional 97.53
TIGR02045446 P_fruct_ADP ADP-specific phosphofructokinase. Phos 97.24
PRK03979463 ADP-specific phosphofructokinase; Provisional 97.1
KOG2598 523 consensus Phosphomethylpyrimidine kinase [Coenzyme 97.04
KOG2599308 consensus Pyridoxal/pyridoxine/pyridoxamine kinase 97.03
PRK10565508 putative carbohydrate kinase; Provisional 96.54
PF02110246 HK: Hydroxyethylthiazole kinase family; InterPro: 96.5
PF01256242 Carb_kinase: Carbohydrate kinase; InterPro: IPR000 96.42
COG2145265 ThiM Hydroxyethylthiazole kinase, sugar kinase fam 96.31
PF04587444 ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco 95.91
PRK14038453 ADP-dependent glucokinase; Provisional 94.67
cd01938445 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and 91.65
KOG3974306 consensus Predicted sugar kinase [Carbohydrate tra 90.36
COG0063284 Predicted sugar kinase [Carbohydrate transport and 88.59
>PRK11142 ribokinase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.1e-41  Score=308.74  Aligned_cols=273  Identities=24%  Similarity=0.343  Sum_probs=224.0

Q ss_pred             CCCCCCCCCCceE-----EecCCchHHHHHHHHHcCCCceEEEeecCChhhHHHHHHHHHcCCcccceEEeCCCCccEEE
Q 046789            3 SDPLPPLPENRIV-----VQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTY   77 (336)
Q Consensus         3 ~~~~~p~~~~~~~-----~~~GG~a~n~a~~l~~LG~~v~~i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~   77 (336)
                      .++.+|.+++.++     ..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++...++.+|+.++
T Consensus        18 ~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~   97 (306)
T PRK11142         18 NLESFPRPGETLTGRHYQVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVAL   97 (306)
T ss_pred             EeCCCCCCCCeeEeccceecCCCcHHHHHHHHHhcCCcEEEEEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEE
Confidence            4677788887764     78999999999999999999999999999999999999999999999999877888899999


Q ss_pred             EEEcCCCCeeEEEecCCC-CCCCCcccchhhHhhhccCCcEEEEcCCcH-HHHHHHHHHHHhCCCcEEEeCCcchHhHHH
Q 046789           78 VIVDNQMKTRTCIHTPGD-PPMIPDDLSESTIFSALDGARILYLDGRLP-DTAIIVAQEAARKNIPILIDTERQRERIDE  155 (336)
Q Consensus        78 ~~~~~~g~~~~~~~~~~~-~~~~~e~~~~~~~~~~l~~~~~i~~~~~~~-~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~  155 (336)
                      ++++.+|.+ +.+...+. ..+++++++.  +.+.+..++++|+++..+ +....+++.++++++++++|+.........
T Consensus        98 ~~~~~~g~r-~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~  174 (306)
T PRK11142         98 IFVNDEGEN-SIGIHAGANAALTPALVEA--HRELIANADALLMQLETPLETVLAAAKIAKQHGTKVILNPAPARELPDE  174 (306)
T ss_pred             EEECCCCCE-EEEEeCCccccCCHHHHHH--HHhhhccCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEEECCCCcccCHH
Confidence            988876554 44444443 3566665543  345689999999997765 667789999999999999999643344467


Q ss_pred             hhhcCcEEecCcccchhhcCCCC----hHHHHHHHHHcCCCCcEEEEeecCCceEEEeeccCCCCchhhhhhhHHHHHHh
Q 046789          156 FLKLASYAVCSAKFPQVWTEAPS----VPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLK  231 (336)
Q Consensus       156 ~l~~~dil~~n~~e~~~l~~~~~----~~~~~~~~l~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (336)
                      +++++|++++|++|+..+++...    ....+.+.+.. .+++.+|+|+|++|++++.++...                 
T Consensus       175 ~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~-----------------  236 (306)
T PRK11142        175 LLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQ-KGIETVLITLGSRGVWLSENGEGQ-----------------  236 (306)
T ss_pred             HHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHHHHHH-hCCCeEEEEECCCcEEEEeCCcce-----------------
Confidence            88999999999999998887531    12234455544 389999999999999987655432                 


Q ss_pred             hhcCCCCCCccccchhhhhhhccCcccccceeeecccccCCCCCccccCCchhhhHHHHHHHHHhCCChhhHHHHHHHHH
Q 046789          232 QRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVA  311 (336)
Q Consensus       232 ~~~~~~~~vp~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vvd~tGAGDaF~ag~i~~l~~g~~l~~al~~a~~~A  311 (336)
                             ++|                          +   ++.+++|||||||+|.|||++++++|+++++|+++|+++|
T Consensus       237 -------~~~--------------------------~---~~v~vvDt~GAGDaF~Agfi~~l~~g~~~~~al~~a~~~A  280 (306)
T PRK11142        237 -------RVP--------------------------G---FRVQAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAA  280 (306)
T ss_pred             -------ecc--------------------------C---CCcccccCCCchhHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence                   444                          4   5678999999999999999999999999999999999999


Q ss_pred             HhhccccCCccCCCCCCCccc
Q 046789          312 AAGCRALGARTSLPHRTDPRL  332 (336)
Q Consensus       312 a~~~~~~g~~~~~p~~~e~~~  332 (336)
                      +.+|++.|+.+.+|+++++++
T Consensus       281 a~~~~~~G~~~~~~~~~~~~~  301 (306)
T PRK11142        281 AIAVTRKGAQPSIPWREEIDA  301 (306)
T ss_pred             HHHcCCCcccccCCCHHHHHH
Confidence            999999999877898888753

>PTZ00292 ribokinase; Provisional Back     alignment and domain information
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>PLN02967 kinase Back     alignment and domain information
>cd01945 ribokinase_group_B Ribokinase-like subgroup B Back     alignment and domain information
>TIGR02152 D_ribokin_bact ribokinase Back     alignment and domain information
>PLN02341 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>PLN02323 probable fructokinase Back     alignment and domain information
>PRK09434 aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>PLN02543 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PLN02813 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PRK09850 pseudouridine kinase; Provisional Back     alignment and domain information
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15074 inosine/guanosine kinase; Provisional Back     alignment and domain information
>PTZ00247 adenosine kinase; Provisional Back     alignment and domain information
>TIGR03828 pfkB 1-phosphofructokinase Back     alignment and domain information
>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01942 ribokinase_group_A Ribokinase-like subgroup A Back     alignment and domain information
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>cd01944 YegV_kinase_like YegV-like sugar kinase Back     alignment and domain information
>PLN02379 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>PRK09954 putative kinase; Provisional Back     alignment and domain information
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like Back     alignment and domain information
>PLN02548 adenosine kinase Back     alignment and domain information
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I Back     alignment and domain information
>PRK10294 6-phosphofructokinase 2; Provisional Back     alignment and domain information
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases Back     alignment and domain information
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>cd01943 MAK32 MAK32 kinase Back     alignment and domain information
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>PRK13508 tagatose-6-phosphate kinase; Provisional Back     alignment and domain information
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases Back     alignment and domain information
>cd01941 YeiC_kinase_like YeiC-like sugar kinase Back     alignment and domain information
>PRK09513 fruK 1-phosphofructokinase; Provisional Back     alignment and domain information
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01231 lacC tagatose-6-phosphate kinase Back     alignment and domain information
>PRK09813 fructoselysine 6-kinase; Provisional Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>cd01946 ribokinase_group_C Ribokinase-like subgroup C Back     alignment and domain information
>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01937 ribokinase_group_D Ribokinase-like subgroup D Back     alignment and domain information
>PLN02630 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>PRK12413 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK05756 pyridoxamine kinase; Validated Back     alignment and domain information
>PRK12412 pyridoxal kinase; Reviewed Back     alignment and domain information
>TIGR00687 pyridox_kin pyridoxal kinase Back     alignment and domain information
>PRK07105 pyridoxamine kinase; Validated Back     alignment and domain information
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 Back     alignment and domain information
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase Back     alignment and domain information
>PRK08573 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK12616 pyridoxal kinase; Reviewed Back     alignment and domain information
>PTZ00344 pyridoxal kinase; Provisional Back     alignment and domain information
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] Back     alignment and domain information
>cd01171 YXKO-related B Back     alignment and domain information
>PTZ00347 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase Back     alignment and domain information
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related Back     alignment and domain information
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional Back     alignment and domain information
>PLN02978 pyridoxal kinase Back     alignment and domain information
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 Back     alignment and domain information
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] Back     alignment and domain information
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz Back     alignment and domain information
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>PRK09355 hydroxyethylthiazole kinase; Validated Back     alignment and domain information
>PTZ00493 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>TIGR00694 thiM hydroxyethylthiazole kinase Back     alignment and domain information
>PRK14039 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase Back     alignment and domain information
>PRK03979 ADP-specific phosphofructokinase; Provisional Back     alignment and domain information
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] Back     alignment and domain information
>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK10565 putative carbohydrate kinase; Provisional Back     alignment and domain information
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] Back     alignment and domain information
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase Back     alignment and domain information
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] Back     alignment and domain information
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] Back     alignment and domain information
>PRK14038 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) Back     alignment and domain information
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query336
2fv7_A331 Crystal Structure Of Human Ribokinase Length = 331 5e-12
1tz6_A339 Crystal Structure Of Aminoimidazole Riboside Kinase 1e-08
2qcv_A332 Crystal Structure Of A Putative 5-Dehydro-2-Deoxygl 3e-07
3nbv_A313 X-Ray Structure Of Ketohexokinase In Complex With A 1e-06
3b3l_A298 Crystal Structures Of Alternatively-Spliced Isoform 2e-06
3ry7_A304 Crystal Sructure Of Sa239 Length = 304 8e-06
1tyy_A339 Crystal Structure Of Aminoimidazole Riboside Kinase 1e-05
2hqq_A298 Crystal Structure Of Human Ketohexokinase Complexed 1e-05
2hlz_A312 Crystal Structure Of Human Ketohexokinase (Casp Tar 3e-05
1vm7_A311 Crystal Structure Of Ribokinase (Tm0960) From Therm 6e-05
1lio_A363 Structure Of Apo T. Gondii Adenosine Kinase Length 1e-04
2abs_A383 Crystal Structure Of T. Gondii Adenosine Kinase Com 2e-04
1lii_A363 Structure Of T. Gondii Adenosine Kinase Bound To Ad 4e-04
1rk2_A309 E. Coli Ribokinase Complexed With Ribose And Adp, S 6e-04
1dgm_A363 Crystal Structure Of Adenosine Kinase From Toxoplas 6e-04
>pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 Back     alignment and structure 
Iteration: 1

 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 138/332 (41%), Gaps = 62/332 (18%)
Query: 12  NRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEG 71
           ++  +  GG   N    AARLG    ++ K+  D  G    E  + + + T F   +K+ 
Sbjct: 54  HKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDA 113
Query: 72  NSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRL-PDTAII 130
            +    +IV+N+ +    I    +  +  +DL  +   + +  A+++     + P T++ 
Sbjct: 114 ATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAA--NVISRAKVMVCQLEITPATSLE 171
Query: 131 VAQEAARKNIPILIDTERQRERID-EFLKLASYAVCSAKFPQVWTEAPSVPSAL----VS 185
               A R  +  L +       +D +F  L+    C+    ++ T   +V SA      +
Sbjct: 172 ALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILT-GLTVGSAADAGEAA 230
Query: 186 MLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTCIS 245
           ++L     +  I+TLG +GC++L ++    PE + I                   PT   
Sbjct: 231 LVLLKRGCQVVIITLGAEGCVVLSQT---EPEPKHI-------------------PT--- 265
Query: 246 SLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCA--NMSPEKM 303
                                  EK+   + VDTTGAGD+F+GA+ + L    N+S E M
Sbjct: 266 -----------------------EKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLEDM 299
Query: 304 LPFAAQVAAAGCRALGARTSLPHRTDPRLASF 335
           L  +  +AA   +A G ++S P++ D  L  F
Sbjct: 300 LNRSNFIAAVSVQAAGTQSSYPYKKDLPLTLF 331
>pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 Back     alignment and structure
>pdb|2QCV|A Chain A, Crystal Structure Of A Putative 5-Dehydro-2-Deoxygluconokinase (Iolc) From Bacillus Halodurans C-125 At 1.90 A Resolution Length = 332 Back     alignment and structure
>pdb|3NBV|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With Amp-Pnp And Fructose Length = 313 Back     alignment and structure
>pdb|3B3L|A Chain A, Crystal Structures Of Alternatively-Spliced Isoforms Of Human Ketohexokinase Length = 298 Back     alignment and structure
>pdb|3RY7|A Chain A, Crystal Sructure Of Sa239 Length = 304 Back     alignment and structure
>pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 Back     alignment and structure
>pdb|2HQQ|A Chain A, Crystal Structure Of Human Ketohexokinase Complexed To Different Sugar Molecules Length = 298 Back     alignment and structure
>pdb|2HLZ|A Chain A, Crystal Structure Of Human Ketohexokinase (Casp Target) Length = 312 Back     alignment and structure
>pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 Back     alignment and structure
>pdb|1LIO|A Chain A, Structure Of Apo T. Gondii Adenosine Kinase Length = 363 Back     alignment and structure
>pdb|2ABS|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed With Amp-Pcp Length = 383 Back     alignment and structure
>pdb|1LII|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Adenosine 2 And Amp-Pcp Length = 363 Back     alignment and structure
>pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 Back     alignment and structure
>pdb|1DGM|A Chain A, Crystal Structure Of Adenosine Kinase From Toxoplasma Gondii Length = 363 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query336
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 7e-54
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 3e-32
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 8e-32
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 3e-29
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 7e-29
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 5e-28
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 1e-27
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 2e-27
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 4e-27
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 5e-27
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 9e-27
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 1e-26
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 1e-25
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 9e-25
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 6e-24
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 6e-24
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 1e-23
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 2e-23
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 2e-23
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 3e-23
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 4e-23
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 2e-22
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 1e-21
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 2e-21
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 3e-21
3bf5_A306 Ribokinase related protein; 10640157, putative rib 3e-21
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 4e-21
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 1e-20
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 2e-20
4e3a_A352 Sugar kinase protein; structural genomics, protein 5e-19
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 7e-19
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 2e-18
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 5e-17
2fv7_A331 Ribokinase; structural genomics, structural genomi 3e-16
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 3e-16
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 5e-16
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 2e-14
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 8e-14
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 1e-09
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 5e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 9e-07
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 1e-06
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 1e-06
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 2e-05
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 3e-05
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 Back     alignment and structure
 Score =  178 bits (453), Expect = 7e-54
 Identities = 61/318 (19%), Positives = 103/318 (32%), Gaps = 65/318 (20%)

Query: 13  RIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGN 72
               Q GGNA N+ T  + LG     +  +A       + ++     VD  + V    G+
Sbjct: 48  SQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGS 107

Query: 73  SPFTYVIVDNQMKTRTCIHTPGD-PPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIV 131
            P   VI++    +RT ++     P +   D  +      L   + ++++GR     + +
Sbjct: 108 VPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFKWIHIEGRNASEQVKM 163

Query: 132 AQEAARKN--------IPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSAL 183
            Q     N        I + ++ E+ RE + +          S    +      S   AL
Sbjct: 164 LQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQ-SAEEAL 222

Query: 184 VSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQRKDDRAAVPTC 243
             +  R+      +    E+G   L                                   
Sbjct: 223 RGLYGRVRKGAVLVCAWAEEGADALGP--------------------------------- 249

Query: 244 ISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKM 303
                            G+L    A   PP  +VDT GAGD F  +V+++L    S ++ 
Sbjct: 250 ----------------DGKLLHSDA--FPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEA 291

Query: 304 LPFAAQVAAAGCRALGAR 321
           L F  QVA   C   G  
Sbjct: 292 LRFGCQVAGKKCGLQGFD 309
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query336
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 100.0
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 100.0
2fv7_A331 Ribokinase; structural genomics, structural genomi 100.0
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 100.0
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 100.0
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 100.0
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 100.0
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 100.0
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 100.0
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 100.0
3vas_A370 Putative adenosine kinase; ribokinase, enzyme, tra 100.0
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 100.0
3uq6_A372 Adenosine kinase, putative; ribokinase, transferas 100.0
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 100.0
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 100.0
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 100.0
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 100.0
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 100.0
4e3a_A352 Sugar kinase protein; structural genomics, protein 100.0
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 100.0
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 100.0
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 100.0
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 100.0
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 100.0
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 100.0
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 100.0
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 100.0
3umo_A309 6-phosphofructokinase isozyme 2; glycolysis, trans 100.0
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 100.0
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 100.0
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 100.0
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 100.0
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 100.0
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 100.0
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 100.0
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 100.0
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 100.0
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 100.0
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 100.0
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 100.0
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 100.0
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 100.0
4e84_A352 D-beta-D-heptose 7-phosphate kinase; LPS-heptose b 100.0
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 100.0
4gm6_A351 PFKB family carbohydrate kinase; enzyme function i 100.0
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 100.0
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 100.0
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 100.0
3bf5_A306 Ribokinase related protein; 10640157, putative rib 100.0
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 100.0
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 99.84
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 99.83
1jxh_A288 Phosphomethylpyrimidine kinase; THID, ribokinase f 99.79
1ub0_A258 THID, phosphomethylpyrimidine kinase; thiamin bios 99.76
2i5b_A271 Phosphomethylpyrimidine kinase; ADP complex, PDXK, 99.73
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 99.63
3h74_A282 Pyridoxal kinase; PSI-II, structural genomics, pro 99.6
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 99.59
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 99.5
1ekq_A272 Hydroxyethylthiazole kinase; alpha-beta, transfera 99.34
3rm5_A 550 Hydroxymethylpyrimidine/phosphomethylpyrimidine K 99.17
1v8a_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 98.84
3bgk_A311 SMU.573, putative uncharacterized protein; alpha/b 98.49
3dzv_A273 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ 98.42
2r3b_A310 YJEF-related protein; putative kinase in the ribok 98.33
3rpz_A279 ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str 98.27
3rss_A502 Putative uncharacterized protein; unknown function 98.25
3drw_A474 ADP-specific phosphofructokinase; AMP, GLYC kinase 97.97
1ua4_A455 Glucokinase, ADP-dependent glucokinase; transferas 97.73
3nl6_A540 Thiamine biosynthetic bifunctional enzyme; thiamin 97.52
1gc5_A467 ADP-dependent glucokinase; ALFA/beta sandwichs, in 97.46
3hpd_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 97.23
1l2l_A457 ADP-dependent glucokinase; ADP glucokinase APO, tr 96.99
3k5w_A475 Carbohydrate kinase; 11206B,helicobacter pylori,PS 95.04
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Back     alignment and structure
Probab=100.00  E-value=1.8e-42  Score=318.38  Aligned_cols=272  Identities=20%  Similarity=0.315  Sum_probs=229.3

Q ss_pred             CCCCCCCCCce------EEecCCchHHHHHHHHHcCCCceEEEeecCChhhHHHHHHHHHcCCcccceEEeCCCCccEEE
Q 046789            4 DPLPPLPENRI------VVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFTY   77 (336)
Q Consensus         4 ~~~~p~~~~~~------~~~~GG~a~n~a~~l~~LG~~v~~i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~   77 (336)
                      ++.+|.++++.      +..+||++.|+|.++++||.++.++|.+|+|.+|+.+++.|++.||+++++...++.+|+.++
T Consensus        19 ~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~   98 (304)
T 3ry7_A           19 VERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAF   98 (304)
T ss_dssp             CSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEE
T ss_pred             ccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEE
Confidence            67788887765      389999999999999999999999999999999999999999999999999887788899999


Q ss_pred             EEEcCCCCeeEEEecCCC-CCCCCcccchhhHhhhccCCcEEEEcCCcH-HHHHHHHHHHHhCCCcEEEeCCcchHhHHH
Q 046789           78 VIVDNQMKTRTCIHTPGD-PPMIPDDLSESTIFSALDGARILYLDGRLP-DTAIIVAQEAARKNIPILIDTERQRERIDE  155 (336)
Q Consensus        78 ~~~~~~g~~~~~~~~~~~-~~~~~e~~~~~~~~~~l~~~~~i~~~~~~~-~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~  155 (336)
                      ++++.+|.++... .+++ ..+++++++.  ..+.++.++++++++..+ +.+..+++.++++++++++|+....+....
T Consensus        99 ~~~~~~g~~~~~~-~~ga~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~~~~~  175 (304)
T 3ry7_A           99 ITVNAEGQNTIYV-YGGANMTMTPEDVIN--AKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNE  175 (304)
T ss_dssp             EEECSSCCEEEEE-ECGGGGGCCHHHHHT--THHHHHTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCSCCCCCHH
T ss_pred             EEECCCCCEEEEE-ecCchhcCCHHHHHH--HHHHhccCCEEEEcCCCCHHHHHHHHHHHHHcCCEEEEeCCccccccHH
Confidence            9998776555444 4443 3677766654  345688999999988765 677789999999999999999755456678


Q ss_pred             hhhcCcEEecCcccchhhcCCCC----hHHHHHHHHHcCCCCcEEEEeecCCceEEEeeccCCCCchhhhhhhHHHHHHh
Q 046789          156 FLKLASYAVCSAKFPQVWTEAPS----VPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLK  231 (336)
Q Consensus       156 ~l~~~dil~~n~~e~~~l~~~~~----~~~~~~~~l~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (336)
                      +++++|++++|++|+..+++...    ..+.+++.+.+. +++.+++|+|++|++++.+++..                 
T Consensus       176 ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~-g~~~vvvt~G~~G~~~~~~~~~~-----------------  237 (304)
T 3ry7_A          176 LLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSI-GIKTVLITLGKQGTYFATKNQSQ-----------------  237 (304)
T ss_dssp             HHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHT-TCCEEEEECGGGCEEEECSSCEE-----------------
T ss_pred             HHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHc-CCCEEEEEeCCCceEEEECCeeE-----------------
Confidence            89999999999999999988642    234455555553 89999999999999998755432                 


Q ss_pred             hhcCCCCCCccccchhhhhhhccCcccccceeeecccccCCCCCccccCCchhhhHHHHHHHHHhC-CChhhHHHHHHHH
Q 046789          232 QRKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCAN-MSPEKMLPFAAQV  310 (336)
Q Consensus       232 ~~~~~~~~vp~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vvd~tGAGDaF~ag~i~~l~~g-~~l~~al~~a~~~  310 (336)
                             ++|                          +   ++++++|||||||+|.|||+++|++| +++++|+++|+++
T Consensus       238 -------~~~--------------------------~---~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~  281 (304)
T 3ry7_A          238 -------HIE--------------------------A---YKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKA  281 (304)
T ss_dssp             -------EEC--------------------------C---SSCCSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHH
T ss_pred             -------Eec--------------------------C---CCcccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence                   444                          4   56789999999999999999999999 9999999999999


Q ss_pred             HHhhccccCCccCCCCCCCccc
Q 046789          311 AAAGCRALGARTSLPHRTDPRL  332 (336)
Q Consensus       311 Aa~~~~~~g~~~~~p~~~e~~~  332 (336)
                      |+.+|++.|+.+++|+++|+++
T Consensus       282 aa~~~~~~G~~~~~p~~~ev~~  303 (304)
T 3ry7_A          282 SSLTVQKHGAQASIPLLEEVNQ  303 (304)
T ss_dssp             HHTTSCCCCTGGGCCCHHHHHT
T ss_pred             HHHHhCCCCccccCCCHHHHhh
Confidence            9999999999989999999864
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Back     alignment and structure
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Back     alignment and structure
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Back     alignment and structure
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Back     alignment and structure
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Back     alignment and structure
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Back     alignment and structure
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Back     alignment and structure
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* Back     alignment and structure
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 Back     alignment and structure
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} Back     alignment and structure
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* Back     alignment and structure
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Back     alignment and structure
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* Back     alignment and structure
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Back     alignment and structure
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A Back     alignment and structure
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} Back     alignment and structure
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} Back     alignment and structure
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A Back     alignment and structure
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A Back     alignment and structure
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* Back     alignment and structure
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A Back     alignment and structure
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 Back     alignment and structure
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Back     alignment and structure
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 Back     alignment and structure
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} Back     alignment and structure
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 Back     alignment and structure
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 336
d2afba1333 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase 5e-24
d1vk4a_288 c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot 2e-20
d2absa1350 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g 3e-18
d1rkda_306 c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 2e-17
d2fv7a1308 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien 1e-16
d1bx4a_342 c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien 2e-15
d2ajra1319 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T 6e-15
d2dcna1308 c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 4e-14
d2dcna1308 c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 4e-04
d1v19a_302 c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther 4e-14
d1v19a_302 c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther 8e-05
d1vm7a_299 c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax 5e-13
d2f02a1313 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac 2e-11
d1tyya_304 c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm 2e-10
d1tyya_304 c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm 8e-06
d2abqa1306 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru 7e-10
d2abqa1306 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru 3e-06
>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermotoga maritima, TM0067 [TaxId: 2336]

 Score = 98.2 bits (243), Expect = 5e-24
 Identities = 50/327 (15%), Positives = 105/327 (32%), Gaps = 27/327 (8%)

Query: 4   DPLPPLPENRIVVQGGGNAGNALTCAARLGLNPRIISKIADDPQGKGIREEFEADGVDTS 63
           D       +   V  GG   N     A++GL+   ++K+ ++P G          GV T 
Sbjct: 20  DHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTD 79

Query: 64  FLVVSKEGNSPFTYVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGR 123
           + +          ++ +    +    ++      +      +      LDGAR  +  G 
Sbjct: 80  Y-IARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGI 138

Query: 124 LPDTAIIVAQEAARKNIPILIDTERQRERIDEFLKLASYAVCSAKFPQVWTEAPSVPSAL 183
            P                     +     +++ LK+A+    +      +          
Sbjct: 139 TPPLG------------------KELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEA 180

Query: 184 VSMLLRLPNLRFAIVTLGEDGCIMLERSVN----ESPELEEIDVDSLLEQLKQRKDDRAA 239
             +++        ++   ED   +L  SV     ++ +L       + E++ ++ + +  
Sbjct: 181 QKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTV 240

Query: 240 VPTCISSLETRLRAEGIGTVS-GRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANM 298
             T   S+   +    +     G+ +           +VD  GAGD+F GA++Y      
Sbjct: 241 GITLRESISATVNYWSVMVFENGQPHFSNR---YEIHIVDRVGAGDSFAGALIYGSLMGF 297

Query: 299 SPEKMLPFAAQVAAAGCRALGARTSLP 325
             +K   FAA  +       G    L 
Sbjct: 298 DSQKKAEFAAAASCLKHTIPGDFVVLS 324
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 Back     information, alignment and structure
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query336
d1vm7a_299 Ribokinase {Thermotoga maritima [TaxId: 2336]} 100.0
d1v19a_302 2-keto-3-deoxygluconate kinase {Thermus thermophil 100.0
d2fv7a1308 Ribokinase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1rkda_306 Ribokinase {Escherichia coli [TaxId: 562]} 100.0
d2afba1333 2-keto-3-deoxygluconate kinase {Thermotoga maritim 100.0
d1tyya_304 Aminoimidazole riboside kinase {Salmonella typhimu 100.0
d2f02a1313 Tagatose-6-phosphate kinase LacC {Enterococcus fae 100.0
d2abqa1306 Fructose 1-phosphate kinase FruB {Bacillus halodur 100.0
d2ajra1319 Putative sugar kinase TM0828 {Thermotoga maritima 100.0
d1bx4a_342 Adenosine kinase {Human (Homo sapiens) [TaxId: 960 100.0
d2dcna1308 Hypothetical fructokinase ST2478 {Sulfolobus tokod 100.0
d2absa1350 Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} 100.0
d1vk4a_288 Hypothetical protein TM0415 {Thermotoga maritima [ 99.97
d1vi9a_288 Pyridoxamine kinase {Escherichia coli [TaxId: 562] 99.34
d1ub0a_258 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 98.97
d1jxha_266 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 98.96
d1lhpa_309 Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] 98.89
d1ekqa_269 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba 98.14
d1v8aa_264 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar 97.69
d1kyha_275 Hypothetical protein YxkO {Bacillus subtilis [TaxI 97.67
d1u2xa_450 ADP-specific phosphofructokinase {Pyrococcus horik 97.57
d1gc5a_467 ADP-dependent glucokinase {Archaeon Thermococcus l 96.89
d2ax3a1278 Hypothetical protein TM0922, C-terminal domain {Th 96.15
d1ua4a_454 ADP-dependent glucokinase {Archaeon Pyrococcus fur 96.06
d1l2la_451 ADP-dependent glucokinase {Archaeon Thermococcus l 91.22
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.6e-36  Score=275.14  Aligned_cols=267  Identities=22%  Similarity=0.296  Sum_probs=216.2

Q ss_pred             CCCCCCCCCCceE-----EecCCchHHHHHHHHHcCCC-ceEEEeecCChhhHHHHHHHHHcCCcccceEEeCCCCccEE
Q 046789            3 SDPLPPLPENRIV-----VQGGGNAGNALTCAARLGLN-PRIISKIADDPQGKGIREEFEADGVDTSFLVVSKEGNSPFT   76 (336)
Q Consensus         3 ~~~~~p~~~~~~~-----~~~GG~a~n~a~~l~~LG~~-v~~i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~   76 (336)
                      .+|.+|.++++++     .++||+++|+|.+|++||.+ +.++|.+|+|+.|+.+++.|++.||++..+   .+.+|+.+
T Consensus        18 ~v~~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~~---~~~~t~~~   94 (299)
T d1vm7a_          18 KVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGITGYIR---VSLPTGRA   94 (299)
T ss_dssp             ECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTEEEEEE---CSSCCCEE
T ss_pred             EeCCCCCCCcEEeeeeEEEecCCHHHHHHHHHHHcCCCceEEEEeeeccchhHHHHHHHhhhccccccc---ccccccee
Confidence            4789999998766     79999999999999999997 789999999999999999999999997754   35668888


Q ss_pred             EEEEcCCCCeeEEEecCCCCCCCCcccchhhHhhhccCCcEEEEcCCcHHHHHHHHHHHHhCCCcEEEeCCcchHhHHHh
Q 046789           77 YVIVDNQMKTRTCIHTPGDPPMIPDDLSESTIFSALDGARILYLDGRLPDTAIIVAQEAARKNIPILIDTERQRERIDEF  156 (336)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~  156 (336)
                      .+.++.+|.++..........+++++++.    ..+...+++++++..+...  ..+...+.+.++++++.........+
T Consensus        95 ~i~~~~~g~~~~~~~~~~~~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (299)
T d1vm7a_          95 FIEVDKTGQNRIIIFPGANAELKKELIDW----NTLSESDILLLQNEIPFET--TLECAKRFNGIVIFDPAPAQGINEEI  168 (299)
T ss_dssp             EEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHTTCSEEEECSSSCHHH--HHHHHHHCCSEEEECCCSCTTCCGGG
T ss_pred             EEEecCCCCeeEeccCCcchhCCHhHhCh----hhcccccceeecccccchh--hhHhhhhcCceEEEecCcchhhhHHH
Confidence            99888776555544443334777777775    5678889999998877554  34456678888999986555555567


Q ss_pred             hhcCcEEecCcccchhhc----CCCChHHHHHHHHHcCCCCcEEEEeecCCceEEEeeccCCCCchhhhhhhHHHHHHhh
Q 046789          157 LKLASYAVCSAKFPQVWT----EAPSVPSALVSMLLRLPNLRFAIVTLGEDGCIMLERSVNESPELEEIDVDSLLEQLKQ  232 (336)
Q Consensus       157 l~~~dil~~n~~e~~~l~----~~~~~~~~~~~~l~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (336)
                      ++.+|++++|.+|+....    ......+.....+.. .+.+.+++|+|++|++++..++..                  
T Consensus       169 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vvvt~G~~g~~~~~~~~~~------------------  229 (299)
T d1vm7a_         169 FQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLE-LGVKNVIVKLGDKGVLLVNKNEKK------------------  229 (299)
T ss_dssp             GGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHH-TTCSEEEEECGGGCEEEEETTEEE------------------
T ss_pred             HhhcccccccHHHHHhhhccccccchhhhhhhhhhhc-CCCcEEEEeCCCCceEEEeccceE------------------
Confidence            899999999998876432    223334444444544 489999999999999999877653                  


Q ss_pred             hcCCCCCCccccchhhhhhhccCcccccceeeecccccCCCCCccccCCchhhhHHHHHHHHHhCCChhhHHHHHHHHHH
Q 046789          233 RKDDRAAVPTCISSLETRLRAEGIGTVSGRLYIGTAEKIPPSELVDTTGAGDAFIGAVLYALCANMSPEKMLPFAAQVAA  312 (336)
Q Consensus       233 ~~~~~~~vp~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vvd~tGAGDaF~ag~i~~l~~g~~l~~al~~a~~~Aa  312 (336)
                            ++|                          +   ++.+++|||||||+|+|||+++|++|+++++|+++|+++|+
T Consensus       230 ------~~~--------------------------~---~~~~vvDttGAGDaf~Ag~i~~l~~g~~~~~al~~a~~~aa  274 (299)
T d1vm7a_         230 ------HFP--------------------------T---FKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAA  274 (299)
T ss_dssp             ------EEC--------------------------C---CCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             ------EEe--------------------------e---eeeeeECCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence                  333                          4   67789999999999999999999999999999999999999


Q ss_pred             hhccccCCccCCCCCCCccc
Q 046789          313 AGCRALGARTSLPHRTDPRL  332 (336)
Q Consensus       313 ~~~~~~g~~~~~p~~~e~~~  332 (336)
                      ++|++.|+.+++|+++|+++
T Consensus       275 ~~~~~~G~~~~~p~~~ei~~  294 (299)
T d1vm7a_         275 ISVTRLGAQSSIPAREEVEA  294 (299)
T ss_dssp             HHTTSSSSGGGCCCHHHHHH
T ss_pred             HHhCcCCCCCCCCCHHHHHH
Confidence            99999999999999999875
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure