Citrus Sinensis ID: 046808

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650---
MATASLLSSSFFISKPPSPSSLFFHLPVKQFVSSSAQFRQRYGAVVSATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVELEGDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM
cccccccccccccccccccccccccccEEEcccccccccccccHHHHHHHcccccccccEEEEccEEEcccccccccEEEccccccHHHHHHHHcHHHHHHHHHHHHHcccccEEEcccccccEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccccHHHHHcccccccEEEEEEcccEEEcccccccccccccccccccccccccccccccEEccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHccccEEcccEEccHHHHHHccccccccccccccccccccccccccccccccEEEEccccccccccccHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccEEcccccccccccccEEEEEcccccccccccccccccccccccEEEcccccccccEEEEcccccHHHHHHHHHHHHcccccccccccccEEEEcccccHHHHHHHHHHHHHHcccEEEccccccccHHHHHHccccccEEEEEcccccccccEEEEEccccccccccHHHHHHHHHHHHHHcccc
cccHHHccccEEEEEcccccEEEcccccccccccHHHHHccccHHHHHHHHHHHHHHHHHcHcccEEccccccHcccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHccccEEEEccEEcccEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccccEEEEHHcccccccEEEEEcccEEEcccccccccccEEEEEEEEEccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccEEEEccEEEEHHHHHccccHHHHHHHcccccccccEEEEEccccHHHHHHHHcccccEHHHccEEEEEEEEEEccccHHHcEcccEccEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHHHccccEEEEccccEccEcEEEEEEEcccccEEEEEEEEEEccHHHHccccEEcccccEEccEEEEEEEEEEHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHHHccccEEEcccccccEEEEHHHcccccEEEEEccHHHHccEEEEEEccccccccccHHHHHHHHHHHHHHcccc
matasllsssffiskppspsslffhlpvkqfvssSAQFRQRYGAVVSatsvatepaetpsvtqngkveqaqmtsetekvvlptnesneQLLRIRHTCAHVMAMAVQKlypdakvtigpwiengfyydfdmepltdKDLKRIKKEMDRIIgrnlplvreevSRDEAKSRIMAIKEPYKMEILESiiedpitiYHIGEEwwdlcagphvettgkINKKAVelegdekkpMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHrrlgqdldlfsiqdeaggglvfwhpkgsIVRHIIEDFWkkshiehdydllytphvakADLWKISGHLDFYRENMYDQMNIEDelyqlrpmncpyhILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGlfrvrgftqddahIFCLEDQIKDEIRAVLDLTEEILLQFGFnkyevnlstkpekavggddiWEKATSALRDALddkgwdyqidegggafygpkidLKIEDalgrkwqcstiqvdfnlpqrfdivyvdsnsekkrpiMIHRAVLGSLERFFGVLIEHyagdfplwlspiqarvlpvtDTQLEYCNEVIKKLKTNgiraeichgerlpKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRsrfggelgtmkVDDFISRIKSatenrttm
matasllsssffisKPPSPSSLFFHLPVKQFVSSSAQFRQRYGAVVSATSvatepaetpsvtqngkveqaqmtsetekvvlptneSNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMdriigrnlplvreevsrdeaksrimaikepykmEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKkavelegdekkpMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFgfnkyevnlstkpekavggddiWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTiqvdfnlpqrFDIVYVdsnsekkrpiMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKklktngiraeichgerlpklIRNAEKQKIPLMAVvgakevdaqtvtvrsrfggelgtmkvddfisriksatenrttm
MATAsllsssffiskppspsslffhlpVKQFVSSSAQFRQRYGAVVSATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVELEGDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM
*********************LFFHLPVKQFVSSSAQFRQRYGAVV******************************************QLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVR**********RIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVE********MLQRIYGTAWENEEQLKAYLHFKE*******RRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFIS************
*************************LPVKQFVSSSAQFRQRYGAVVSATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVELEGDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGG*LGTMKVDDFISRIKSATENRT**
********SSFFISKPPSPSSLFFHLPVKQFVSSSAQFRQRYGAVV*****************************TEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVELEGDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM
******LSSSFFISKPPSPSSLFFHLPVKQFVSSSAQFRQRYGAVVSATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVELEGDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR***
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SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATASLLSSSFFISKPPSPSSLFFHLPVKQFVSSSAQFRQRYGAVVSATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVELEGDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query653 2.2.26 [Sep-21-2011]
Q3AYC6611 Threonine--tRNA ligase OS yes no 0.888 0.949 0.614 0.0
Q0I902617 Threonine--tRNA ligase OS yes no 0.874 0.925 0.627 0.0
A5GJT7610 Threonine--tRNA ligase OS yes no 0.877 0.939 0.614 0.0
Q3AKU0611 Threonine--tRNA ligase OS yes no 0.877 0.937 0.602 0.0
Q7U662611 Threonine--tRNA ligase OS yes no 0.877 0.937 0.606 0.0
Q31JY3604 Threonine--tRNA ligase OS yes no 0.886 0.958 0.540 0.0
Q5N1X6607 Threonine--tRNA ligase OS yes no 0.886 0.953 0.540 0.0
Q3JC02644 Threonine--tRNA ligase OS yes no 0.862 0.874 0.556 0.0
A0L4J6648 Threonine--tRNA ligase OS yes no 0.931 0.938 0.516 0.0
B5EN57644 Threonine--tRNA ligase OS yes no 0.879 0.891 0.541 0.0
>sp|Q3AYC6|SYT_SYNS9 Threonine--tRNA ligase OS=Synechococcus sp. (strain CC9902) GN=thrS PE=3 SV=1 Back     alignment and function desciption
 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/591 (61%), Positives = 453/591 (76%), Gaps = 11/591 (1%)

Query: 70  AQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFD 129
           A  ++    VVLP    +EQLL+IRH+ +HVMAMAVQKL+P+A+VTIGPW E GFYYDFD
Sbjct: 14  ATTSAPLAPVVLPKTSESEQLLKIRHSMSHVMAMAVQKLFPNAQVTIGPWTETGFYYDFD 73

Query: 130 M-EPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIEDP 188
             EP T+ DLK IKKEM +IIGR LPL R EVSRDEA++RI A  EPYK+EILE + ++P
Sbjct: 74  NPEPFTEDDLKAIKKEMGKIIGRKLPLERIEVSRDEAETRIKAQNEPYKLEILERL-QEP 132

Query: 189 ITIYHIGEEWWDLCAGPHVETTGKINKKAVELE--------GDEKKPMLQRIYGTAWENE 240
           IT+Y +G++WWDLCAGPHVE T +++ KA ELE        GDE K  LQRIYGTAWE  
Sbjct: 133 ITLYTLGDQWWDLCAGPHVENTKELHPKAFELESVAGAYWRGDETKAQLQRIYGTAWETP 192

Query: 241 EQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSH 300
           EQL  +   K EA RRDHRRLG+DL+LFSI+DEAG GLVFWHP+G+ +R +IEDFW+++H
Sbjct: 193 EQLAEHKRRKVEALRRDHRRLGKDLELFSIEDEAGAGLVFWHPRGARMRLLIEDFWRQAH 252

Query: 301 IEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRK 360
            E  Y+LLYTPHVA   LWK SGHLDFY E+M+  M +++  YQL+PMNCP+H+L Y  K
Sbjct: 253 FEGGYELLYTPHVADISLWKTSGHLDFYAESMFGPMQVDEREYQLKPMNCPFHVLTYASK 312

Query: 361 LQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLT 420
           L+SYR+ PIR AELGTVYRYE  G +HGL RVRGFTQDDAH+FCL DQI DEI  +LDLT
Sbjct: 313 LRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPDQISDEILRILDLT 372

Query: 421 EEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGP 480
           E IL  F FN YE+NLST+PEK++G + +WE AT  L +AL+ KGW+++IDEGGGAFYGP
Sbjct: 373 ERILSTFDFNHYEINLSTRPEKSIGSEAVWELATKGLTEALERKGWNFKIDEGGGAFYGP 432

Query: 481 KIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGV 540
           KIDLKIEDA+GR WQCSTIQ+DFNLP+RF + YV ++  K++PIMIHRA+ GSLERFFG+
Sbjct: 433 KIDLKIEDAIGRMWQCSTIQLDFNLPERFGLDYVAADGSKQQPIMIHRAIFGSLERFFGI 492

Query: 541 LIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRN 599
           + E+YAGDFP WL+P Q R+LPVTD    Y  +V+ +LKT GIRA I   G+RL K+IR 
Sbjct: 493 MTENYAGDFPFWLAPEQIRLLPVTDDVQPYAEQVLNQLKTAGIRATIDQSGDRLGKIIRT 552

Query: 600 AEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENR 650
            E+ KIP++AV+GAKE +   +++RSR  G+LG   VD  +   + A   R
Sbjct: 553 GEQMKIPVLAVIGAKEAEQNAISLRSRRDGDLGVTSVDALLKAAQRANAER 603

Synechococcus sp. (strain CC9902) (taxid: 316279)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 3
>sp|Q0I902|SYT_SYNS3 Threonine--tRNA ligase OS=Synechococcus sp. (strain CC9311) GN=thrS PE=3 SV=1 Back     alignment and function description
>sp|A5GJT7|SYT_SYNPW Threonine--tRNA ligase OS=Synechococcus sp. (strain WH7803) GN=thrS PE=3 SV=1 Back     alignment and function description
>sp|Q3AKU0|SYT_SYNSC Threonine--tRNA ligase OS=Synechococcus sp. (strain CC9605) GN=thrS PE=3 SV=1 Back     alignment and function description
>sp|Q7U662|SYT_SYNPX Threonine--tRNA ligase OS=Synechococcus sp. (strain WH8102) GN=thrS PE=3 SV=1 Back     alignment and function description
>sp|Q31JY3|SYT_SYNE7 Threonine--tRNA ligase OS=Synechococcus elongatus (strain PCC 7942) GN=thrS PE=3 SV=1 Back     alignment and function description
>sp|Q5N1X6|SYT_SYNP6 Threonine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=thrS PE=3 SV=1 Back     alignment and function description
>sp|Q3JC02|SYT_NITOC Threonine--tRNA ligase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=thrS PE=3 SV=1 Back     alignment and function description
>sp|A0L4J6|SYT_MAGSM Threonine--tRNA ligase OS=Magnetococcus sp. (strain MC-1) GN=thrS PE=3 SV=1 Back     alignment and function description
>sp|B5EN57|SYT_ACIF5 Threonine--tRNA ligase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=thrS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query653
359485807670 PREDICTED: threonyl-tRNA synthetase-like 0.984 0.959 0.814 0.0
296084987688 unnamed protein product [Vitis vinifera] 0.984 0.934 0.801 0.0
22325483650 putative threonyl-tRNA synthetase, putat 0.943 0.947 0.812 0.0
297835784650 hypothetical protein ARALYDRAFT_319286 [ 0.943 0.947 0.813 0.0
302121711721 threonyl-tRNA synthetase [Hypericum perf 0.980 0.887 0.776 0.0
356572524652 PREDICTED: threonyl-tRNA synthetase-like 0.882 0.883 0.868 0.0
357462587690 Threonyl-tRNA synthetase [Medicago trunc 0.970 0.918 0.754 0.0
449453584672 PREDICTED: threonine--tRNA ligase-like [ 0.995 0.967 0.771 0.0
326492063667 predicted protein [Hordeum vulgare subsp 0.903 0.884 0.797 0.0
115446545674 Os02g0538000 [Oryza sativa Japonica Grou 0.903 0.875 0.792 0.0
>gi|359485807|ref|XP_002270988.2| PREDICTED: threonyl-tRNA synthetase-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1117 bits (2888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/670 (81%), Positives = 584/670 (87%), Gaps = 27/670 (4%)

Query: 8   SSSFFISKPPSPSSLFFH---LPVKQFVSSSAQF-RQR----------YGAVVSATSVAT 53
           S S F S     S+   H    P+K+ VS S  F R R          +G   ++++VAT
Sbjct: 4   SHSLFASSLKLTSNQLLHHYRCPLKRIVSISGGFSRSRIRVLPLYHKAHGLSTTSSAVAT 63

Query: 54  EPAETPSVTQNGKVEQAQMTSET--EKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPD 111
           +  ++   T +  +   +   E   EK+VLPTNES+E+LLRIRHTCAHVMAMAVQKL+PD
Sbjct: 64  DSTDS---TDSAVLADDKGLGEAPPEKIVLPTNESSERLLRIRHTCAHVMAMAVQKLFPD 120

Query: 112 AKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMA 171
           AKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPL+REEVSRDEA+ RIMA
Sbjct: 121 AKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMA 180

Query: 172 IKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVELE--------GD 223
           + EPYKMEIL+SI EDPITIYHIG EWWDLCAGPHVE TG IN+KAVELE        GD
Sbjct: 181 VNEPYKMEILDSIQEDPITIYHIGGEWWDLCAGPHVEYTGNINRKAVELESVAGAYWRGD 240

Query: 224 EKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHP 283
           EKK MLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHP
Sbjct: 241 EKKQMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHP 300

Query: 284 KGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELY 343
           KG+IVR IIED WKK HIEH YDLLYTPHVA+ADLWK SGHLDFYRENMY Q+ IEDELY
Sbjct: 301 KGAIVRRIIEDSWKKIHIEHGYDLLYTPHVARADLWKTSGHLDFYRENMYSQITIEDELY 360

Query: 344 QLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIF 403
           QLRPMNCPYHIL+Y+RKL SYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIF
Sbjct: 361 QLRPMNCPYHILIYKRKLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIF 420

Query: 404 CLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDD 463
           CLEDQIKDEIR VLDLTEEILLQFGF+KYEVNLST+PEKAVG DDIWEKATSALRDALDD
Sbjct: 421 CLEDQIKDEIRGVLDLTEEILLQFGFSKYEVNLSTRPEKAVGADDIWEKATSALRDALDD 480

Query: 464 KGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRP 523
           KGW Y+IDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDI YVDSNSEK+RP
Sbjct: 481 KGWSYRIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDSNSEKQRP 540

Query: 524 IMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGI 583
           IMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEV  KLK NGI
Sbjct: 541 IMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVTNKLKANGI 600

Query: 584 RAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRI 643
           RAE+CHGERLPKLIRN+EKQ+IPLMAVVG KEV+ QTVTVRSRFGGELGTM V+DFISR 
Sbjct: 601 RAEVCHGERLPKLIRNSEKQRIPLMAVVGPKEVETQTVTVRSRFGGELGTMIVEDFISRT 660

Query: 644 KSATENRTTM 653
           KSATENRT+ 
Sbjct: 661 KSATENRTSF 670

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296084987|emb|CBI28402.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|22325483|ref|NP_671778.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gi|330250779|gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297835784|ref|XP_002885774.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp. lyrata] gi|297331614|gb|EFH62033.1| hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|302121711|gb|ADK92877.1| threonyl-tRNA synthetase [Hypericum perforatum] Back     alignment and taxonomy information
>gi|356572524|ref|XP_003554418.1| PREDICTED: threonyl-tRNA synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|357462587|ref|XP_003601575.1| Threonyl-tRNA synthetase [Medicago truncatula] gi|355490623|gb|AES71826.1| Threonyl-tRNA synthetase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449453584|ref|XP_004144536.1| PREDICTED: threonine--tRNA ligase-like [Cucumis sativus] gi|449506889|ref|XP_004162876.1| PREDICTED: threonine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|326492063|dbj|BAJ98256.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326499331|dbj|BAK06156.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|115446545|ref|NP_001047052.1| Os02g0538000 [Oryza sativa Japonica Group] gi|50251985|dbj|BAD27919.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group] gi|50252661|dbj|BAD28830.1| putative threonyl-tRNA synthetase [Oryza sativa Japonica Group] gi|113536583|dbj|BAF08966.1| Os02g0538000 [Oryza sativa Japonica Group] gi|215765092|dbj|BAG86789.1| unnamed protein product [Oryza sativa Japonica Group] gi|222623006|gb|EEE57138.1| hypothetical protein OsJ_07040 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query653
TAIR|locus:504956029650 EMB2761 "EMBRYO DEFECTIVE 2761 0.943 0.947 0.813 2.9e-284
TIGR_CMR|GSU_1515636 GSU_1515 "threonyl-tRNA synthe 0.879 0.902 0.5 8.6e-159
TIGR_CMR|DET_0753582 DET_0753 "threonyl-tRNA synthe 0.849 0.953 0.504 7.4e-153
TIGR_CMR|CHY_1579634 CHY_1579 "threonyl-tRNA synthe 0.923 0.951 0.472 2e-150
TIGR_CMR|CJE_0199602 CJE_0199 "threonyl-tRNA synthe 0.892 0.968 0.464 6.8e-143
TIGR_CMR|CPS_2909636 CPS_2909 "threonyl-tRNA synthe 0.889 0.913 0.436 1.5e-136
TIGR_CMR|BA_2388639 BA_2388 "threonyl-tRNA synthet 0.874 0.893 0.437 5.2e-136
UNIPROTKB|P67582692 thrS "Threonine--tRNA ligase" 0.670 0.632 0.460 6.7e-134
UNIPROTKB|Q9KMN7642 thrS "Threonine--tRNA ligase" 0.892 0.908 0.44 8.1e-131
TIGR_CMR|VC_A0287642 VC_A0287 "threonyl-tRNA synthe 0.892 0.908 0.44 8.1e-131
TAIR|locus:504956029 EMB2761 "EMBRYO DEFECTIVE 2761" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2731 (966.4 bits), Expect = 2.9e-284, P = 2.9e-284
 Identities = 518/637 (81%), Positives = 568/637 (89%)

Query:    28 VKQFVS-SSAQF--RQRYGAVVSATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTN 84
             +++FV   + QF  RQR+G   +  +VATEPA    ++ +G  +     +E   VVLP+N
Sbjct:    24 LRRFVYLPTRQFWPRQRHG-FSTVFAVATEPA----ISSSGPKK-----AEPSTVVLPSN 73

Query:    85 ESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKE 144
             ES+++LL+IRHTCAHVMAMAVQKL+PDAKVTIGPWI+NGFYYDFDMEPLTDKDLKRIKKE
Sbjct:    74 ESSDKLLKIRHTCAHVMAMAVQKLFPDAKVTIGPWIDNGFYYDFDMEPLTDKDLKRIKKE 133

Query:   145 MDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAG 204
             MDRII RNLPL+REEVSR+EAK RIMAI EPYKMEIL+ I E+PIT+YHIG EWWDLCAG
Sbjct:   134 MDRIISRNLPLLREEVSREEAKKRIMAINEPYKMEILDGIKEEPITVYHIGNEWWDLCAG 193

Query:   205 PHVETTGKINKKAVELE--------GDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRR 256
             PHVETTGKINKKAVELE        GDEK+ MLQRIYGTAWE+EEQLKAYLHFKEEAKRR
Sbjct:   194 PHVETTGKINKKAVELESVAGAYWRGDEKRQMLQRIYGTAWESEEQLKAYLHFKEEAKRR 253

Query:   257 DHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKA 316
             DHRR+GQDLDLFSIQDEAGGGLVFWHPKG+IVR+IIE+ WKK H+EH YDL+YTPHVAKA
Sbjct:   254 DHRRIGQDLDLFSIQDEAGGGLVFWHPKGAIVRNIIEESWKKMHVEHGYDLIYTPHVAKA 313

Query:   317 DLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGT 376
             DLWKISGHLDFYRENMYDQM IEDELYQLRPMNCPYHIL+YQRK QSYRD PIRVAELGT
Sbjct:   314 DLWKISGHLDFYRENMYDQMEIEDELYQLRPMNCPYHILLYQRKRQSYRDLPIRVAELGT 373

Query:   377 VYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNL 436
             VYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIR VLDLTEEIL +FGFNKYEVNL
Sbjct:   374 VYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILSRFGFNKYEVNL 433

Query:   437 STKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQC 496
             ST+PEK+VGGDDIWEKAT ALRDALDDKGW Y++DEGGGAFYGPKIDLKIEDALGRKWQC
Sbjct:   434 STRPEKSVGGDDIWEKATCALRDALDDKGWSYEVDEGGGAFYGPKIDLKIEDALGRKWQC 493

Query:   497 STIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPI 556
             STIQVDFNLPQRFDI YVD+NS+KKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSP+
Sbjct:   494 STIQVDFNLPQRFDITYVDTNSDKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPV 553

Query:   557 QARVLPVTDTQLEYCNEVIKKLKTNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEV 616
             Q RVLPVTD QLE+C EV KKL+  G+RAE+CHGERLPKLIRNAE QKIPLMAVVG KEV
Sbjct:   554 QVRVLPVTDNQLEFCKEVSKKLRACGVRAELCHGERLPKLIRNAETQKIPLMAVVGPKEV 613

Query:   617 DAQTVTVRSRFGGELGTMKVDDFISRIKSATENRTTM 653
             +  TVTVRSRFGGELGT+ VDD I++I  A E RT +
Sbjct:   614 ETGTVTVRSRFGGELGTIPVDDLINKINIAVETRTAL 650
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA
GO:0004829 "threonine-tRNA ligase activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA
GO:0006435 "threonyl-tRNA aminoacylation" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016876 "ligase activity, forming aminoacyl-tRNA and related compounds" evidence=IEA
GO:0043039 "tRNA aminoacylation" evidence=IEA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
TIGR_CMR|GSU_1515 GSU_1515 "threonyl-tRNA synthetase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0753 DET_0753 "threonyl-tRNA synthetase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1579 CHY_1579 "threonyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0199 CJE_0199 "threonyl-tRNA synthetase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2909 CPS_2909 "threonyl-tRNA synthetase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2388 BA_2388 "threonyl-tRNA synthetase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|P67582 thrS "Threonine--tRNA ligase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KMN7 thrS "Threonine--tRNA ligase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A0287 VC_A0287 "threonyl-tRNA synthetase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A5GJT7SYT_SYNPW6, ., 1, ., 1, ., 30.61470.87740.9393yesno
Q3JC02SYT_NITOC6, ., 1, ., 1, ., 30.55630.86210.8742yesno
B2V6M2SYT_SULSY6, ., 1, ., 1, ., 30.52920.86980.8833yesno
B8GRI1SYT_THISH6, ., 1, ., 1, ., 30.53250.89430.9082yesno
A7FY87SYT_CLOB16, ., 1, ., 1, ., 30.48420.84990.8740yesno
B8J4E4SYT_DESDA6, ., 1, ., 1, ., 30.49120.85600.8639yesno
C6BRH1SYT_DESAD6, ., 1, ., 1, ., 30.49300.85600.8707yesno
Q5N1X6SYT_SYNP66, ., 1, ., 1, ., 30.54090.88660.9538yesno
Q3AYC6SYT_SYNS96, ., 1, ., 1, ., 30.61420.88820.9492yesno
C3KTK0SYT_CLOB66, ., 1, ., 1, ., 30.48420.84990.8740yesno
A5FRB3SYT_DEHSB6, ., 1, ., 1, ., 30.51220.84830.9518yesno
A5I6L8SYT_CLOBH6, ., 1, ., 1, ., 30.48420.84990.8740yesno
Q3Z8G2SYT_DEHE16, ., 1, ., 1, ., 30.49820.84830.9518yesno
B5EBX9SYT_GEOBB6, ., 1, ., 1, ., 30.49310.87440.8977yesno
Q3ABS6SYT_CARHZ6, ., 1, ., 1, ., 30.47240.92340.9511yesno
B1L0T7SYT_CLOBM6, ., 1, ., 1, ., 30.48590.84990.8740yesno
A0L4J6SYT_MAGSM6, ., 1, ., 1, ., 30.51610.93100.9382yesno
Q3ZXB5SYT_DEHSC6, ., 1, ., 1, ., 30.51050.84830.9518yesno
B9E5W0SYT_CLOK16, ., 1, ., 1, ., 30.45630.92340.9466yesno
Q8DGW0SYT_THEEB6, ., 1, ., 1, ., 30.51680.87590.9454yesno
B5RQ59SYT_BORRA6, ., 1, ., 1, ., 30.46700.85910.9622yesno
B5EN57SYT_ACIF56, ., 1, ., 1, ., 30.54100.87900.8913yesno
Q31JY3SYT_SYNE76, ., 1, ., 1, ., 30.54090.88660.9586yesno
A1R0E4SYT_BORT96, ., 1, ., 1, ., 30.48440.85600.9588yesno
Q30Y11SYT_DESDG6, ., 1, ., 1, ., 30.50870.85910.8711yesno
A3DET1SYT_CLOTH6, ., 1, ., 1, ., 30.50080.84530.8692yesno
Q891T0SYT_CLOTE6, ., 1, ., 1, ., 30.47420.92340.9436yesno
Q728R5SYT_DESVH6, ., 1, ., 1, ., 30.51130.85140.8633yesno
A0PZN1SYT_CLONN6, ., 1, ., 1, ., 30.47160.89430.9167yesno
Q3AKU0SYT_SYNSC6, ., 1, ., 1, ., 30.60270.87740.9378yesno
B2S162SYT_BORHD6, ., 1, ., 1, ., 30.48780.85600.9588yesno
B7J7T0SYT_ACIF26, ., 1, ., 1, ., 30.54100.87900.8913yesno
A7GI05SYT_CLOBL6, ., 1, ., 1, ., 30.48940.84990.8740yesno
C4XL11SYT_DESMR6, ., 1, ., 1, ., 30.49650.86060.8686yesno
B5RMR3SYT_BORDL6, ., 1, ., 1, ., 30.47140.85750.9605yesno
B8DPN2SYT_DESVM6, ., 1, ., 1, ., 30.47780.87440.8866yesno
Q0I902SYT_SYNS36, ., 1, ., 1, ., 30.62710.87440.9254yesno
C1FKN0SYT_CLOBJ6, ., 1, ., 1, ., 30.48770.84990.8740yesno
A4J4Y7SYT_DESRM6, ., 1, ., 1, ., 30.48240.89280.9181yesno
Q3A4P3SYT_PELCD6, ., 1, ., 1, ., 30.49130.85910.8793yesno
C6DYJ5SYT_GEOSM6, ., 1, ., 1, ., 30.49310.87440.8977yesno
B1IMV3SYT_CLOBK6, ., 1, ., 1, ., 30.48070.84990.8740yesno
Q74D04SYT_GEOSL6, ., 1, ., 1, ., 30.49660.87900.9025yesno
O67583SYT_AQUAE6, ., 1, ., 1, ., 30.4750.89730.9184yesno
A1ARE5SYT_PELPD6, ., 1, ., 1, ., 30.50680.86830.8915yesno
Q55806SYT_SYNY36, ., 1, ., 1, ., 30.51820.89120.9651N/Ano
Q7U662SYT_SYNPX6, ., 1, ., 1, ., 30.60610.87740.9378yesno
Q7NCU0SYT_GLOVI6, ., 1, ., 1, ., 30.49570.86060.8963yesno
A5N258SYT_CLOK56, ., 1, ., 1, ., 30.45630.92340.9466yesno
A1VBB4SYT_DESVV6, ., 1, ., 1, ., 30.51130.85140.8633yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.1.1.30.946
3rd Layer6.1.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query653
PLN02837614 PLN02837, PLN02837, threonine-tRNA ligase 0.0
PRK12305575 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed 0.0
PRK00413638 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed 0.0
COG0441589 COG0441, ThrS, Threonyl-tRNA synthetase [Translati 0.0
TIGR00418563 TIGR00418, thrS, threonyl-tRNA synthetase 0.0
PRK12444639 PRK12444, PRK12444, threonyl-tRNA synthetase; Revi 0.0
cd00771298 cd00771, ThrRS_core, Threonyl-tRNA synthetase (Thr 0.0
PLN02908686 PLN02908, PLN02908, threonyl-tRNA synthetase 1e-177
PRK14799545 PRK14799, thrS, threonyl-tRNA synthetase; Provisio 1e-158
PRK03991613 PRK03991, PRK03991, threonyl-tRNA synthetase; Vali 4e-56
pfam00587171 pfam00587, tRNA-synt_2b, tRNA synthetase class II 2e-45
cd0086091 cd00860, ThrRS_anticodon, ThrRS Threonyl-anticodon 1e-31
cd00670235 cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro 4e-29
pfam0312993 pfam03129, HGTP_anticodon, Anticodon binding domai 1e-19
cd00768211 cd00768, class_II_aaRS-like_core, Class II tRNA am 9e-19
PRK14938387 PRK14938, PRK14938, Ser-tRNA(Thr) hydrolase; Provi 1e-12
pfam0797344 pfam07973, tRNA_SAD, Threonyl and Alanyl tRNA synt 2e-12
TIGR00408472 TIGR00408, proS_fam_I, prolyl-tRNA synthetase, fam 2e-11
cd0073894 cd00738, HGTP_anticodon, HGTP anticodon binding do 4e-11
PRK08661477 PRK08661, PRK08661, prolyl-tRNA synthetase; Provis 9e-10
COG0442500 COG0442, ProS, Prolyl-tRNA synthetase [Translation 3e-09
COG0124429 COG0124, HisS, Histidyl-tRNA synthetase [Translati 3e-08
cd0085991 cd00859, HisRS_anticodon, HisRS Histidyl-anticodon 7e-08
PRK00037412 PRK00037, hisS, histidyl-tRNA synthetase; Reviewed 1e-07
COG2872241 COG2872, COG2872, Predicted metal-dependent hydrol 2e-07
TIGR00442397 TIGR00442, hisS, histidyl-tRNA synthetase 6e-07
PRK01584594 PRK01584, PRK01584, alanyl-tRNA synthetase; Provis 9e-07
cd00772264 cd00772, ProRS_core, Prolyl-tRNA synthetase (ProRS 1e-06
smart0086343 smart00863, tRNA_SAD, Threonyl and Alanyl tRNA syn 1e-06
cd00778261 cd00778, ProRS_core_arch_euk, Prolyl-tRNA syntheta 4e-05
COG0013879 COG0013, AlaS, Alanyl-tRNA synthetase [Translation 7e-05
cd00773261 cd00773, HisRS-like_core, Class II Histidinyl-tRNA 2e-04
COG0172429 COG0172, SerS, Seryl-tRNA synthetase [Translation, 3e-04
cd00770297 cd00770, SerRS_core, Seryl-tRNA synthetase (SerRS) 3e-04
TIGR02367242 TIGR02367, PylS_Cterm, pyrrolysyl-tRNA synthetase, 3e-04
TIGR00389551 TIGR00389, glyS_dimeric, glycyl-tRNA synthetase, d 7e-04
PRK13902900 PRK13902, alaS, alanyl-tRNA synthetase; Provisiona 0.001
TIGR00344851 TIGR00344, alaS, alanine--tRNA ligase 0.001
TIGR00414418 TIGR00414, serS, seryl-tRNA synthetase 0.001
cd00779255 cd00779, ProRS_core_prok, Prolyl-tRNA synthetase ( 0.002
>gnl|CDD|215450 PLN02837, PLN02837, threonine-tRNA ligase Back     alignment and domain information 
 Score = 1197 bits (3099), Expect = 0.0
 Identities = 513/614 (83%), Positives = 555/614 (90%), Gaps = 8/614 (1%)

Query: 48  ATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQK 107
            ++ A   A   +       E+    +E E+VVLPTNES+E+LL+IRHTCAHVMAMAVQK
Sbjct: 1   VSAAAASAATEEASAAAASDEKGPGEAEPERVVLPTNESSEKLLKIRHTCAHVMAMAVQK 60

Query: 108 LYPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKS 167
           L+PDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRII RNLPLVREEVSR+EA+ 
Sbjct: 61  LFPDAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIISRNLPLVREEVSREEAQK 120

Query: 168 RIMAIKEPYKMEILESIIEDPITIYHIGEEWWDLCAGPHVETTGKINKKAVELE------ 221
           RIMAI EPYK+EILE I E+PITIYHIGEEWWDLCAGPHVE TGKINKKAVELE      
Sbjct: 121 RIMAINEPYKLEILEGIKEEPITIYHIGEEWWDLCAGPHVERTGKINKKAVELESVAGAY 180

Query: 222 --GDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLV 279
             GDEK  MLQRIYGTAWE+EEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQD+AGGGLV
Sbjct: 181 WRGDEKNQMLQRIYGTAWESEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDDAGGGLV 240

Query: 280 FWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIE 339
           FWHPKG+IVRHIIED WKK H EH YDLLYTPHVAKADLWK SGHLDFY+ENMYDQM+IE
Sbjct: 241 FWHPKGAIVRHIIEDSWKKMHFEHGYDLLYTPHVAKADLWKTSGHLDFYKENMYDQMDIE 300

Query: 340 DELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDD 399
           DELYQLRPMNCPYHILVY+RKL SYRD PIRVAELGTVYRYELSGSLHGLFRVRGFTQDD
Sbjct: 301 DELYQLRPMNCPYHILVYKRKLHSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDD 360

Query: 400 AHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRD 459
           AHIFCLEDQIKDEIR VLDLTEEIL QFGF+KYE+NLST+PEK+VG DDIWEKAT+ALRD
Sbjct: 361 AHIFCLEDQIKDEIRGVLDLTEEILKQFGFSKYEINLSTRPEKSVGSDDIWEKATTALRD 420

Query: 460 ALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSE 519
           ALDDKGW+Y++DEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLP+RFDI YVDSNSE
Sbjct: 421 ALDDKGWEYKVDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPERFDITYVDSNSE 480

Query: 520 KKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLK 579
           KKRPIMIHRA+LGSLERFFGVLIEHYAGDFPLWL+P+QARVLPVTD +LEYC EV+ KLK
Sbjct: 481 KKRPIMIHRAILGSLERFFGVLIEHYAGDFPLWLAPVQARVLPVTDNELEYCKEVVAKLK 540

Query: 580 TNGIRAEICHGERLPKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDF 639
             GIRAE+CHGERLPKLIRNAE QKIPLMAVVG KEV+ +T+TVRSR GGELGTM VDDF
Sbjct: 541 AKGIRAEVCHGERLPKLIRNAETQKIPLMAVVGPKEVETRTLTVRSRHGGELGTMPVDDF 600

Query: 640 ISRIKSATENRTTM 653
           I+RI+ A ENRT++
Sbjct: 601 INRIQLAVENRTSL 614

Length = 614
>gnl|CDD|237050 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234752 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223518 COG0441, ThrS, Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232967 TIGR00418, thrS, threonyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|183530 PRK12444, PRK12444, threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|238394 cd00771, ThrRS_core, Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain Back     alignment and domain information
>gnl|CDD|178496 PLN02908, PLN02908, threonyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|184826 PRK14799, thrS, threonyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235190 PRK03991, PRK03991, threonyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|216009 pfam00587, tRNA-synt_2b, tRNA synthetase class II core domain (G, H, P, S and T) Back     alignment and domain information
>gnl|CDD|238437 cd00860, ThrRS_anticodon, ThrRS Threonyl-anticodon binding domain Back     alignment and domain information
>gnl|CDD|238359 cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain Back     alignment and domain information
>gnl|CDD|202547 pfam03129, HGTP_anticodon, Anticodon binding domain Back     alignment and domain information
>gnl|CDD|238391 cd00768, class_II_aaRS-like_core, Class II tRNA amino-acyl synthetase-like catalytic core domain Back     alignment and domain information
>gnl|CDD|184902 PRK14938, PRK14938, Ser-tRNA(Thr) hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|219676 pfam07973, tRNA_SAD, Threonyl and Alanyl tRNA synthetase second additional domain Back     alignment and domain information
>gnl|CDD|232961 TIGR00408, proS_fam_I, prolyl-tRNA synthetase, family I Back     alignment and domain information
>gnl|CDD|238379 cd00738, HGTP_anticodon, HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) Back     alignment and domain information
>gnl|CDD|236327 PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223519 COG0442, ProS, Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|223202 COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|238436 cd00859, HisRS_anticodon, HisRS Histidyl-anticodon binding domain Back     alignment and domain information
>gnl|CDD|234586 PRK00037, hisS, histidyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|225427 COG2872, COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|213530 TIGR00442, hisS, histidyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|234962 PRK01584, PRK01584, alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|238395 cd00772, ProRS_core, Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>gnl|CDD|197931 smart00863, tRNA_SAD, Threonyl and Alanyl tRNA synthetase second additional domain Back     alignment and domain information
>gnl|CDD|238401 cd00778, ProRS_core_arch_euk, Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>gnl|CDD|223092 COG0013, AlaS, Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|238396 cd00773, HisRS-like_core, Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Back     alignment and domain information
>gnl|CDD|223250 COG0172, SerS, Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|238393 cd00770, SerRS_core, Seryl-tRNA synthetase (SerRS) class II core catalytic domain Back     alignment and domain information
>gnl|CDD|188213 TIGR02367, PylS_Cterm, pyrrolysyl-tRNA synthetase, C-terminal region Back     alignment and domain information
>gnl|CDD|232951 TIGR00389, glyS_dimeric, glycyl-tRNA synthetase, dimeric type Back     alignment and domain information
>gnl|CDD|237551 PRK13902, alaS, alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|232931 TIGR00344, alaS, alanine--tRNA ligase Back     alignment and domain information
>gnl|CDD|232965 TIGR00414, serS, seryl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|238402 cd00779, ProRS_core_prok, Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 653
PRK12444639 threonyl-tRNA synthetase; Reviewed 100.0
PLN02837614 threonine-tRNA ligase 100.0
PLN02908686 threonyl-tRNA synthetase 100.0
PRK00413638 thrS threonyl-tRNA synthetase; Reviewed 100.0
PRK12305575 thrS threonyl-tRNA synthetase; Reviewed 100.0
COG0441589 ThrS Threonyl-tRNA synthetase [Translation, riboso 100.0
TIGR00418563 thrS threonyl-tRNA synthetase. This model represen 100.0
PRK14799545 thrS threonyl-tRNA synthetase; Provisional 100.0
KOG1637560 consensus Threonyl-tRNA synthetase [Translation, r 100.0
PRK03991613 threonyl-tRNA synthetase; Validated 100.0
PRK12325439 prolyl-tRNA synthetase; Provisional 100.0
cd00771298 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class 100.0
PRK08661477 prolyl-tRNA synthetase; Provisional 100.0
TIGR00408472 proS_fam_I prolyl-tRNA synthetase, family I. Proly 100.0
PRK09194565 prolyl-tRNA synthetase; Provisional 100.0
COG0124429 HisS Histidyl-tRNA synthetase [Translation, riboso 100.0
TIGR00409568 proS_fam_II prolyl-tRNA synthetase, family II. Pro 100.0
PRK04173456 glycyl-tRNA synthetase; Provisional 100.0
CHL00201430 syh histidine-tRNA synthetase; Provisional 100.0
PLN02530487 histidine-tRNA ligase 100.0
KOG2324457 consensus Prolyl-tRNA synthetase [Translation, rib 100.0
PRK00037412 hisS histidyl-tRNA synthetase; Reviewed 100.0
PLN02972763 Histidyl-tRNA synthetase 100.0
COG0442500 ProS Prolyl-tRNA synthetase [Translation, ribosoma 100.0
PRK14894539 glycyl-tRNA synthetase; Provisional 100.0
TIGR00389551 glyS_dimeric glycyl-tRNA synthetase, dimeric type. 100.0
COG0423558 GRS1 Glycyl-tRNA synthetase (class II) [Translatio 100.0
PRK12420423 histidyl-tRNA synthetase; Provisional 100.0
TIGR00442397 hisS histidyl-tRNA synthetase. This model finds a 100.0
KOG1936518 consensus Histidyl-tRNA synthetase [Translation, r 100.0
PLN02734684 glycyl-tRNA synthetase 100.0
cd00770297 SerRS_core Seryl-tRNA synthetase (SerRS) class II 100.0
PRK05431425 seryl-tRNA synthetase; Provisional 100.0
cd00778261 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) 100.0
TIGR00414418 serS seryl-tRNA synthetase. This model represents 100.0
cd00779255 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) cla 100.0
PLN02678448 seryl-tRNA synthetase 100.0
cd00772264 ProRS_core Prolyl-tRNA synthetase (ProRS) class II 100.0
PLN02320502 seryl-tRNA synthetase 100.0
PRK12292391 hisZ ATP phosphoribosyltransferase regulatory subu 100.0
cd00670235 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t 100.0
KOG4163551 consensus Prolyl-tRNA synthetase [Translation, rib 100.0
PRK00960517 seryl-tRNA synthetase; Provisional 100.0
PRK12421392 ATP phosphoribosyltransferase regulatory subunit; 100.0
COG0172429 SerS Seryl-tRNA synthetase [Translation, ribosomal 99.98
TIGR00415520 serS_MJ seryl-tRNA synthetase, Methanococcus janna 99.97
KOG2298599 consensus Glycyl-tRNA synthetase and related class 99.97
KOG2509455 consensus Seryl-tRNA synthetase [Translation, ribo 99.96
PF00587173 tRNA-synt_2b: tRNA synthetase class II core domain 99.96
cd00773261 HisRS-like_core Class II Histidinyl-tRNA synthetas 99.95
TIGR00443314 hisZ_biosyn_reg ATP phosphoribosyltransferase, reg 99.94
cd00774254 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-lik 99.94
PRK12293281 hisZ ATP phosphoribosyltransferase regulatory subu 99.94
PF13393311 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI 99.91
PRK12295373 hisZ ATP phosphoribosyltransferase regulatory subu 99.9
COG3705390 HisZ ATP phosphoribosyltransferase involved in his 99.87
COG0013879 AlaS Alanyl-tRNA synthetase [Translation, ribosoma 99.84
TIGR00344851 alaS alanine--tRNA ligase. The model describes ala 99.84
PLN02900936 alanyl-tRNA synthetase 99.84
PRK00252865 alaS alanyl-tRNA synthetase; Reviewed 99.83
PLN02961223 alanine-tRNA ligase 99.82
PRK13902900 alaS alanyl-tRNA synthetase; Provisional 99.82
TIGR03683902 A-tRNA_syn_arch alanyl-tRNA synthetase. This famil 99.82
PRK01584594 alanyl-tRNA synthetase; Provisional 99.82
COG2872241 Predicted metal-dependent hydrolases related to al 99.77
cd00768211 class_II_aaRS-like_core Class II tRNA amino-acyl s 99.76
cd00862202 ProRS_anticodon_zinc ProRS Prolyl-anticodon bindin 99.75
cd02426128 Pol_gamma_b_Cterm C-terminal domain of mitochondri 99.73
cd00858121 GlyRS_anticodon GlyRS Glycyl-anticodon binding dom 99.73
PF0312994 HGTP_anticodon: Anticodon binding domain; InterPro 99.69
KOG0188895 consensus Alanyl-tRNA synthetase [Translation, rib 99.68
PRK14938387 Ser-tRNA(Thr) hydrolase; Provisional 99.67
PRK07080317 hypothetical protein; Validated 99.66
cd0086194 ProRS_anticodon_short ProRS Prolyl-anticodon bindi 99.65
KOG2105415 consensus Predicted metal-dependent hydrolase, con 99.58
cd0086091 ThrRS_anticodon ThrRS Threonyl-anticodon binding d 99.58
PRK12294272 hisZ ATP phosphoribosyltransferase regulatory subu 99.57
TIGR02367453 PylS pyrrolysyl-tRNA synthetase. PylS is the archa 99.54
cd0073894 HGTP_anticodon HGTP anticodon binding domain, as f 99.52
PRK09537417 pylS pyrolysyl-tRNA synthetase; Reviewed 99.48
PRK04172489 pheS phenylalanyl-tRNA synthetase subunit alpha; P 99.37
cd0085991 HisRS_anticodon HisRS Histidyl-anticodon binding d 99.26
PF0797344 tRNA_SAD: Threonyl and Alanyl tRNA synthetase seco 98.99
PTZ00326494 phenylalanyl-tRNA synthetase alpha chain; Provisio 98.99
KOG10351351 consensus eIF-2alpha kinase GCN2 [Translation, rib 98.85
PRK09350306 poxB regulator PoxA; Provisional 98.69
cd00669269 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase cl 98.52
COG0442 500 ProS Prolyl-tRNA synthetase [Translation, ribosoma 98.5
smart0086344 tRNA_SAD Threonyl and Alanyl tRNA synthetase secon 98.4
COG0173585 AspS Aspartyl-tRNA synthetase [Translation, riboso 98.32
PF01409247 tRNA-synt_2d: tRNA synthetases class II core domai 98.27
cd00777280 AspRS_core Asp tRNA synthetase (aspRS) class II co 98.25
cd00776322 AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class 98.2
PF12745 273 HGTP_anticodon2: Anticodon binding domain of tRNAs 98.16
PRK00488339 pheS phenylalanyl-tRNA synthetase subunit alpha; V 98.09
COG0016335 PheS Phenylalanyl-tRNA synthetase alpha subunit [T 98.04
cd00496218 PheRS_alpha_core Phenylalanyl-tRNA synthetase (Phe 98.02
TIGR00459583 aspS_bact aspartyl-tRNA synthetase, bacterial type 98.0
TIGR00468294 pheS phenylalanyl-tRNA synthetase, alpha subunit. 97.98
TIGR00462304 genX lysyl-tRNA synthetase-like protein GenX. Many 97.95
PRK06462335 asparagine synthetase A; Reviewed 97.91
PF00152335 tRNA-synt_2: tRNA synthetases class II (D, K and N 97.9
COG2269322 Truncated, possibly inactive, lysyl-tRNA synthetas 97.9
PLN02853492 Probable phenylalanyl-tRNA synthetase alpha chain 97.89
cd00775329 LysRS_core Lys_tRNA synthetase (LysRS) class II co 97.85
PRK00476588 aspS aspartyl-tRNA synthetase; Validated 97.83
KOG2411628 consensus Aspartyl-tRNA synthetase, mitochondrial 97.82
PLN02903652 aminoacyl-tRNA ligase 97.8
PRK00484491 lysS lysyl-tRNA synthetase; Reviewed 97.79
PRK05159437 aspC aspartyl-tRNA synthetase; Provisional 97.77
PRK12820 706 bifunctional aspartyl-tRNA synthetase/aspartyl/glu 97.76
TIGR00458428 aspS_arch aspartyl-tRNA synthetase, archaeal type. 97.75
PTZ00417585 lysine-tRNA ligase; Provisional 97.74
PRK12445505 lysyl-tRNA synthetase; Reviewed 97.72
PLN02502553 lysyl-tRNA synthetase 97.69
PRK03932450 asnC asparaginyl-tRNA synthetase; Validated 97.69
TIGR00499496 lysS_bact lysyl-tRNA synthetase, eukaryotic and no 97.67
PTZ00385659 lysyl-tRNA synthetase; Provisional 97.63
PLN02850530 aspartate-tRNA ligase 97.59
PTZ00401550 aspartyl-tRNA synthetase; Provisional 97.4
TIGR00457453 asnS asparaginyl-tRNA synthetase. In a multiple se 97.38
PRK029831094 lysS lysyl-tRNA synthetase; Provisional 97.28
PTZ00425586 asparagine-tRNA ligase; Provisional 97.23
PLN02221572 asparaginyl-tRNA synthetase 97.22
PLN02532633 asparagine-tRNA synthetase 97.18
PLN02603565 asparaginyl-tRNA synthetase 97.17
COG1190502 LysU Lysyl-tRNA synthetase (class II) [Translation 97.15
COG0017435 AsnS Aspartyl/asparaginyl-tRNA synthetases [Transl 97.11
KOG1885560 consensus Lysyl-tRNA synthetase (class II) [Transl 96.48
TIGR00470533 sepS O-phosphoseryl-tRNA(Cys) synthetase. This fam 96.33
PRK09616552 pheT phenylalanyl-tRNA synthetase subunit beta; Re 96.06
KOG0556533 consensus Aspartyl-tRNA synthetase [Translation, r 94.85
cd00769198 PheRS_beta_core Phenylalanyl-tRNA synthetase (PheR 94.75
PLN02788402 phenylalanine-tRNA synthetase 94.47
PF0282460 TGS: TGS domain; InterPro: IPR004095 The TGS domai 93.53
KOG2784483 consensus Phenylalanyl-tRNA synthetase, beta subun 93.53
KOG0554446 consensus Asparaginyl-tRNA synthetase (mitochondri 92.11
PLN02265597 probable phenylalanyl-tRNA synthetase beta chain 90.77
COG2024536 Phenylalanyl-tRNA synthetase alpha subunit (archae 90.68
TIGR00471551 pheT_arch phenylalanyl-tRNA synthetase, beta subun 90.13
PRK06253529 O-phosphoseryl-tRNA synthetase; Reviewed 85.2
KOG0555545 consensus Asparaginyl-tRNA synthetase [Translation 81.85
cd0166761 TGS_ThrRS_N TGS _ThrRS_N: ThrRS (threonyl-tRNA Syn 80.89
TIGR00469460 pheS_mito phenylalanyl-tRNA synthetase, mitochondr 80.1
>PRK12444 threonyl-tRNA synthetase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=2.7e-112  Score=970.90  Aligned_cols=593  Identities=44%  Similarity=0.835  Sum_probs=571.0

Q ss_pred             cCCCCCcccccCcccccccccCCCCeEEEeecCChHHHHHHHHHHHHHHHHHHHHHcCCCEEEecccccCeeEEEecC-C
Q 046808           53 TEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDM-E  131 (653)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~~hS~~hlL~~A~~~l~~~~~~~~~~~~~~g~~~d~~~-~  131 (653)
                      ...+.+++.+||.+||+++++..+|+|++++.++.+|.++||||++|||++|++++||+..+.++|++++|+||||+. .
T Consensus        35 ~~~~iv~a~vn~~l~dL~~~i~~d~~i~fv~~~~~~g~~iy~hS~~hlL~~A~~~~~~~~~~~i~~~~~~g~y~d~~~~~  114 (639)
T PRK12444         35 LKKKAVAGKVNDKLYDLRRNLEEDAEVEIITIDSNEGVEIARHSAAHILAQAVKRLYGDVNLGVGPVIENGFYYDMDLPS  114 (639)
T ss_pred             cchheEEEEECCEEEEcCcccCCCCeEEEecCCChHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCcCCCeEEEEEeCCC
Confidence            456678999999999999999999999999999999999999999999999999999999999999999999999997 6


Q ss_pred             CCCHHHHHHHHHHHHHHHhcCCCEEEEEecHHHHHHHHHhcCChhhHHHhhhcCC-CCEEEEEECCceeeeecccccccc
Q 046808          132 PLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEILESIIE-DPITIYHIGEEWWDLCAGPHVETT  210 (653)
Q Consensus       132 ~lt~~~l~~Ie~~m~~iI~~~~pI~~~~~~~~eA~~~~~~~~~~~k~~ll~~~~~-~~v~i~~ig~~~~d~c~G~hv~~T  210 (653)
                      ++|++++.+||++|+++|++|+||++..++++||.++|+..++++|.+|++..+. +.|++|+|| +++|+|+|||||||
T Consensus       115 ~it~edl~~Ie~~m~eiI~~~~pI~~~~v~~eeA~~~F~~~~~~~K~~ll~~~~~~~~v~iy~~~-~~~D~c~G~hv~sT  193 (639)
T PRK12444        115 SVNVEDLRKIEKEMKKIINENIKIERVEVSREEAAKLFQEMNDRLKLELLEAIPSGESITLYKQG-EFVDLCRGPHLPST  193 (639)
T ss_pred             CCCHHHHHHHHHHHHHHHhcCCCEEEEEecHHHHHHHHhhcCCchHHHHHhcCCCCCeEEEEEEC-CEEEEcCCcCCCCC
Confidence            8999999999999999999999999999999999999999999999999998775 669999999 89999999999999


Q ss_pred             ccccccceEEe--------ecCCccceeeecccccccHHHHHHhhhhhHHhhhchhHhhhcccCcccccccccCcceecC
Q 046808          211 GKINKKAVELE--------GDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWH  282 (653)
Q Consensus       211 g~i~~~~f~l~--------~~~k~~~l~Ri~g~~~~~~~~L~~~~e~~eeakk~~h~~l~~~l~l~~~~~~~~~G~~~~l  282 (653)
                      |+|  +.|+|.        |++++++++|++|++|++.+++++|++..++++++||++||++++||++++ .++|+++|+
T Consensus       194 g~i--k~f~l~~~~~g~~~g~~~~~~l~Ri~g~a~~~~~~l~~~~~~~~~~~~~dH~~l~~~~~l~~~~~-~~~G~~~~~  270 (639)
T PRK12444        194 GYL--KAFQLTHVSGAYWRGDSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAKRNHRKLGKELELFMFSE-EAPGMPFYL  270 (639)
T ss_pred             CCC--ceeEEEEEcceEEcCCCCCcceEEEEEEecCCHHHHHHHHHHHHHhccCCHHHHHHHcCCccccc-ccCcceEEe
Confidence            999  999988        788899999999999999999999999999999999999999999999954 689999999


Q ss_pred             ccccHHHHHHHHHHHHHHHhcCCeEEecCccCchhhhhhcCcccccccccceecccCCceEEeccCChHHHHHHHHhhhc
Q 046808          283 PKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQ  362 (653)
Q Consensus       283 P~g~~l~~~I~~~~~~~~~~~G~~~I~tP~le~~~l~~~sg~~~~~~~~~y~~~d~~~~~l~LrP~~~~~~~~~~~~~~~  362 (653)
                      |.|+.+++.|++++++.+.++||++|.||+|++.++|+++||++.|.++|| +.|.+++.++||||+|+++++++++++.
T Consensus       271 p~g~~~~~~i~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sG~~~~~~~emy-~~d~~~~~~~LrP~~~~~~~~~~~~~~~  349 (639)
T PRK12444        271 PKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWERSGHWDHYKDNMY-FSEVDNKSFALKPMNCPGHMLMFKNKLH  349 (639)
T ss_pred             eCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCChhhhhhhcC-eecCCCcEEEEccCCCHHHHHHHhCccc
Confidence            999999999999999999999999999999999999999999999999999 7889999999999999999999999999


Q ss_pred             ccCCCCcEEEEeeeeeecCCCCCCCCcceeceeEEcceeeeeCchhHHHHHHHHHHHHHHHHHHcCCCeEEEEecCCccc
Q 046808          363 SYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNLSTKPEK  442 (653)
Q Consensus       363 s~~~lP~rl~~~g~~fR~E~~~~~~GL~R~REF~q~d~~ifg~~~~~~d~~~e~l~~~~~il~~lGl~~~~v~l~~~~~~  442 (653)
                      ||++||+|+||+|+|||+|++|.++||+|+|||+|.|+|+||+++++.+++.++++++.++|+.||+ ++.+.++++|.+
T Consensus       350 sy~~LP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~d~~~f~~~~~~~~e~~~~~~~~~~i~~~lgl-~~~~~~~~r~~~  428 (639)
T PRK12444        350 SYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPDQIEDEIKSVMAQIDYVYKTFGF-EYEVELSTRPED  428 (639)
T ss_pred             ChhhCCceeEEeccccCCCCCcCCcCcceeeeeEEccEEEECCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEECCccc
Confidence            9999999999999999999998678999999999999999999999888888999999999999999 588999999999


Q ss_pred             ccCCchhHHHHHHHHHHHHHhcCCceEEcCCCcccccceeeEEEecccCCcccccceEEEecCCcccccEEECCCCCccc
Q 046808          443 AVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKR  522 (653)
Q Consensus       443 ~~g~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~g~~~d~~~~d~~g~~~~~~~i~~d~~~~~r~d~~~~~~~g~~~~  522 (653)
                      ++|.++.|+.+...+.++|+..|++|.+++++|+||||++|+.+.|..|+.|+|+++++|++++.|||++|.+.+|+...
T Consensus       429 ~~G~~e~~~~~~~~l~~~l~~~~~~y~~~~~~ga~Y~~~~e~~~~~~~~~~~~~~t~~~d~~~~~~f~l~~~~~~g~~~~  508 (639)
T PRK12444        429 SMGDDELWEQAEASLENVLQSLNYKYRLNEGDGAFYGPKIDFHIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEKRR  508 (639)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHcCCCceeccCCcccccceEEEEeecCCCChhcccceeeecccccccceEEECCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEecccCchHHHHHHHHHhhcCCCCCCCCCceEEEEecCh-hhHHHHHHHHHHHHhCCCeEEEeC-CCCHHHHHHHH
Q 046808          523 PIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTD-TQLEYCNEVIKKLKTNGIRAEICH-GERLPKLIRNA  600 (653)
Q Consensus       523 p~~g~~~i~GgieRli~~L~e~~~~~~P~~lap~~v~Vi~~~~-~~~~~a~~la~~Lr~~Gi~v~~d~-~~~~~kk~~~A  600 (653)
                      |+++|.+++||+||++++|+|++++.||.|++|.||+|+|+++ +..++|.++++.||++|++|++|. +.++++|+++|
T Consensus       509 P~i~~~~~~g~ieRli~~L~e~~~~~~p~~~ap~qV~Ii~~~~~~~~~~a~~la~~LR~~Gi~veid~~~~sl~kq~k~A  588 (639)
T PRK12444        509 PVVIHRAVLGSLDRFLAILIEHFGGAFPAWLAPVQVKVIPVSNAVHVQYADEVADKLAQAGIRVERDERDEKLGYKIREA  588 (639)
T ss_pred             cEEEEECCCCCHHHHHHHHHHhcCCCCCCccCCceEEEEEcccHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
Confidence            9999999889999999999999888999999999999999998 688999999999999999999999 89999999999


Q ss_pred             HHcCCCEEEEECcccccCCeEEEEECCCCceeeeeHHHHHHHHHHHHhhhc
Q 046808          601 EKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT  651 (653)
Q Consensus       601 ~~~gip~~iiiG~~e~~~~~V~vk~~~~~~q~~v~~~el~~~i~~~~~~~~  651 (653)
                      ++.|+|+++|||++|+++|+|+||+|++++|.+++++++.+.+++.+++++
T Consensus       589 ~k~g~~~~iiiG~~E~~~~~v~vr~~~t~~q~~i~l~el~~~l~~~~~~~~  639 (639)
T PRK12444        589 QMQKIPYVLVIGDKEMENGAVNVRKYGEEKSEVIELDMFVESIKEEIKNRK  639 (639)
T ss_pred             HHcCCCEEEEEcchhhhcCeEEEEECCCCceeeeeHHHHHHHHHHHhhcCC
Confidence            999999999999999999999999999999999999999999999988764

>PLN02837 threonine-tRNA ligase Back     alignment and domain information
>PLN02908 threonyl-tRNA synthetase Back     alignment and domain information
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00418 thrS threonyl-tRNA synthetase Back     alignment and domain information
>PRK14799 thrS threonyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK03991 threonyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK12325 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain Back     alignment and domain information
>PRK08661 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I Back     alignment and domain information
>PRK09194 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II Back     alignment and domain information
>PRK04173 glycyl-tRNA synthetase; Provisional Back     alignment and domain information
>CHL00201 syh histidine-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02530 histidine-tRNA ligase Back     alignment and domain information
>KOG2324 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02972 Histidyl-tRNA synthetase Back     alignment and domain information
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14894 glycyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type Back     alignment and domain information
>COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12420 histidyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00442 hisS histidyl-tRNA synthetase Back     alignment and domain information
>KOG1936 consensus Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02734 glycyl-tRNA synthetase Back     alignment and domain information
>cd00770 SerRS_core Seryl-tRNA synthetase (SerRS) class II core catalytic domain Back     alignment and domain information
>PRK05431 seryl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>TIGR00414 serS seryl-tRNA synthetase Back     alignment and domain information
>cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>PLN02678 seryl-tRNA synthetase Back     alignment and domain information
>cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>PLN02320 seryl-tRNA synthetase Back     alignment and domain information
>PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain Back     alignment and domain information
>KOG4163 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00960 seryl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>COG0172 SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00415 serS_MJ seryl-tRNA synthetase, Methanococcus jannaschii family Back     alignment and domain information
>KOG2298 consensus Glycyl-tRNA synthetase and related class II tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2509 consensus Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes Back     alignment and domain information
>cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Back     alignment and domain information
>TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit Back     alignment and domain information
>cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain Back     alignment and domain information
>PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A Back     alignment and domain information
>PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] Back     alignment and domain information
>COG0013 AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00344 alaS alanine--tRNA ligase Back     alignment and domain information
>PLN02900 alanyl-tRNA synthetase Back     alignment and domain information
>PRK00252 alaS alanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02961 alanine-tRNA ligase Back     alignment and domain information
>PRK13902 alaS alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03683 A-tRNA_syn_arch alanyl-tRNA synthetase Back     alignment and domain information
>PRK01584 alanyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only] Back     alignment and domain information
>cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain Back     alignment and domain information
>cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea Back     alignment and domain information
>cd02426 Pol_gamma_b_Cterm C-terminal domain of mitochondrial DNA polymerase gamma B subunit, which is required for processivity Back     alignment and domain information
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain Back     alignment and domain information
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis Back     alignment and domain information
>KOG0188 consensus Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14938 Ser-tRNA(Thr) hydrolase; Provisional Back     alignment and domain information
>PRK07080 hypothetical protein; Validated Back     alignment and domain information
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria Back     alignment and domain information
>KOG2105 consensus Predicted metal-dependent hydrolase, contains AlaS domain [General function prediction only] Back     alignment and domain information
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain Back     alignment and domain information
>PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>TIGR02367 PylS pyrrolysyl-tRNA synthetase Back     alignment and domain information
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) Back     alignment and domain information
>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional Back     alignment and domain information
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain Back     alignment and domain information
>PF07973 tRNA_SAD: Threonyl and Alanyl tRNA synthetase second additional domain; InterPro: IPR012947 The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer Back     alignment and domain information
>PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional Back     alignment and domain information
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK09350 poxB regulator PoxA; Provisional Back     alignment and domain information
>cd00669 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase class II core domain Back     alignment and domain information
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>smart00863 tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain Back     alignment and domain information
>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01409 tRNA-synt_2d: tRNA synthetases class II core domain (F); InterPro: IPR002319 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00777 AspRS_core Asp tRNA synthetase (aspRS) class II core domain Back     alignment and domain information
>cd00776 AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class II core domain Back     alignment and domain information
>PF12745 HGTP_anticodon2: Anticodon binding domain of tRNAs; InterPro: IPR024435 This is an anticodon binding domain, found largely on Gcn2 proteins which bind tRNA to down regulate translation in certain stress situations [] Back     alignment and domain information
>PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated Back     alignment and domain information
>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00496 PheRS_alpha_core Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain Back     alignment and domain information
>TIGR00459 aspS_bact aspartyl-tRNA synthetase, bacterial type Back     alignment and domain information
>TIGR00468 pheS phenylalanyl-tRNA synthetase, alpha subunit Back     alignment and domain information
>TIGR00462 genX lysyl-tRNA synthetase-like protein GenX Back     alignment and domain information
>PRK06462 asparagine synthetase A; Reviewed Back     alignment and domain information
>PF00152 tRNA-synt_2: tRNA synthetases class II (D, K and N) ; InterPro: IPR004364 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02853 Probable phenylalanyl-tRNA synthetase alpha chain Back     alignment and domain information
>cd00775 LysRS_core Lys_tRNA synthetase (LysRS) class II core domain Back     alignment and domain information
>PRK00476 aspS aspartyl-tRNA synthetase; Validated Back     alignment and domain information
>KOG2411 consensus Aspartyl-tRNA synthetase, mitochondrial [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02903 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK00484 lysS lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK05159 aspC aspartyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12820 bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional Back     alignment and domain information
>TIGR00458 aspS_arch aspartyl-tRNA synthetase, archaeal type Back     alignment and domain information
>PTZ00417 lysine-tRNA ligase; Provisional Back     alignment and domain information
>PRK12445 lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02502 lysyl-tRNA synthetase Back     alignment and domain information
>PRK03932 asnC asparaginyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00499 lysS_bact lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial Back     alignment and domain information
>PTZ00385 lysyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02850 aspartate-tRNA ligase Back     alignment and domain information
>PTZ00401 aspartyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00457 asnS asparaginyl-tRNA synthetase Back     alignment and domain information
>PRK02983 lysS lysyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00425 asparagine-tRNA ligase; Provisional Back     alignment and domain information
>PLN02221 asparaginyl-tRNA synthetase Back     alignment and domain information
>PLN02532 asparagine-tRNA synthetase Back     alignment and domain information
>PLN02603 asparaginyl-tRNA synthetase Back     alignment and domain information
>COG1190 LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0017 AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1885 consensus Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00470 sepS O-phosphoseryl-tRNA(Cys) synthetase Back     alignment and domain information
>PRK09616 pheT phenylalanyl-tRNA synthetase subunit beta; Reviewed Back     alignment and domain information
>KOG0556 consensus Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00769 PheRS_beta_core Phenylalanyl-tRNA synthetase (PheRS) beta chain core domain Back     alignment and domain information
>PLN02788 phenylalanine-tRNA synthetase Back     alignment and domain information
>PF02824 TGS: TGS domain; InterPro: IPR004095 The TGS domain is present in a number of enzymes, for example, in threonyl-tRNA synthetase (ThrRS), GTPase, and guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (SpoT) [] Back     alignment and domain information
>KOG2784 consensus Phenylalanyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0554 consensus Asparaginyl-tRNA synthetase (mitochondrial) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02265 probable phenylalanyl-tRNA synthetase beta chain Back     alignment and domain information
>COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00471 pheT_arch phenylalanyl-tRNA synthetase, beta subunit Back     alignment and domain information
>PRK06253 O-phosphoseryl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0555 consensus Asparaginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd01667 TGS_ThrRS_N TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA Back     alignment and domain information
>TIGR00469 pheS_mito phenylalanyl-tRNA synthetase, mitochondrial Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query653
1qf6_A642 Structure Of E. Coli Threonyl-Trna Synthetase Compl 1e-140
1nyq_A645 Structure Of Staphylococcus Aureus Threonyl-Trna Sy 1e-130
1evk_A401 Crystal Structure Of A Truncated Form Of Threonyl-T 1e-103
3ugq_A460 Crystal Structure Of The Apo Form Of The Yeast Mito 1e-65
3a32_A471 Crystal Structure Of Putative Threonyl-Trna Synthet 2e-60
3a31_A471 Crystal Structure Of Putative Threonyl-Trna Synthet 7e-58
1tje_A224 Crystal Structure Of The Editing Domain Of Threonyl 1e-25
2j3l_A 572 Prolyl-Trna Synthetase From Enterococcus Faecalis C 3e-05
4hvc_A519 Crystal Structure Of Human Prolyl-trna Synthetase I 6e-05
3ial_A 518 Giardia Lamblia Prolyl-Trna Synthetase In Complex W 7e-04
>pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna Length = 642 Back     alignment and structure 
Iteration: 1

 Score =  494 bits (1272), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 251/598 (41%), Positives = 379/598 (63%), Gaps = 12/598 (2%)
Query: 64  NGK-VEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIEN 122
           NG+ V+   +     ++ + T +  E L  IRH+CAH++  A+++L+P  K+ IGP I+N
Sbjct: 41  NGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDN 100
Query: 123 GFYYDFDME-PLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEIL 181
           GFYYD D++  LT +D++ ++K M  +  +N  +++++VS  EA+       E YK+ IL
Sbjct: 101 GFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSIL 160
Query: 182 -ESIIEDPITIYHIGEEWWDLCAGPHVETTG-----KINKKA-VELEGDEKKPMLQRIYG 234
            E+I  D     +  EE+ D+C GPHV         K+ K A     GD    MLQRIYG
Sbjct: 161 DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYG 220
Query: 235 TAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIED 294
           TAW +++ L AYL   EEA +RDHR++G+ LDL+ +Q+EA G +VFWH  G  +   +E 
Sbjct: 221 TAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPG-MVFWHNDGWTIFRELEV 279
Query: 295 FWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHI 354
           F +    E+ Y  +  P +    LW+ +GH D Y++ M+   + E+  Y ++PMNCP H+
Sbjct: 280 FVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSS-ENREYCIKPMNCPGHV 338
Query: 355 LVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIR 414
            ++ + L+SYRD P+R+AE G+ +R E SGSLHGL RVRGFTQDDAHIFC E+QI+DE+ 
Sbjct: 339 QIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVN 398
Query: 415 AVLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGG 474
             + L  ++   FGF K  V LST+PEK +G D++W++A + L  AL++    ++   G 
Sbjct: 399 GCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGE 458
Query: 475 GAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSL 534
           GAFYGPKI+  + D L R WQC T+Q+DF+LP R    YV  ++E+K P+MIHRA+LGS+
Sbjct: 459 GAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSM 518
Query: 535 ERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERL 593
           ERF G+L E +AG FP WL+P+Q  ++ +TD+Q EY NE+ +KL   GIR +     E++
Sbjct: 519 ERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKI 578
Query: 594 PKLIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT 651
              IR    +++P M V G KEV++  V VR+R G +LG+M V++ I +++    +R+
Sbjct: 579 GFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRS 636
>pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate Length = 645 Back     alignment and structure
>pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine Length = 401 Back     alignment and structure
>pdb|3UGQ|A Chain A, Crystal Structure Of The Apo Form Of The Yeast Mitochondrial Threonyl- Trna Synthetase Determined At 2.1 Angstrom Resolution Length = 460 Back     alignment and structure
>pdb|3A32|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase Thrrs-1 From Aeropyrum Pernix Length = 471 Back     alignment and structure
>pdb|3A31|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase Thrrs-1 From Aeropyrum Pernix (Selenomethionine Derivative) Length = 471 Back     alignment and structure
>pdb|1TJE|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna Synthetase Length = 224 Back     alignment and structure
>pdb|2J3L|A Chain A, Prolyl-Trna Synthetase From Enterococcus Faecalis Complexed With A Prolyl-Adenylate Analogue ('5'-O-(N-(L-Prolyl)- Sulfamoyl)adenosine) Length = 572 Back     alignment and structure
>pdb|4HVC|A Chain A, Crystal Structure Of Human Prolyl-trna Synthetase In Complex With Halofuginone And Atp Analogue Length = 519 Back     alignment and structure
>pdb|3IAL|A Chain A, Giardia Lamblia Prolyl-Trna Synthetase In Complex With Prolyl- Adenylate Length = 518 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query653
1qf6_A642 THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m 0.0
1nyr_A645 Threonyl-tRNA synthetase 1; ATP, threonine, ligase 0.0
1evl_A401 Threonyl-tRNA synthetase; amino acid recognition, 0.0
3a32_A471 Probable threonyl-tRNA synthetase 1; aeropyrum per 0.0
3uh0_A460 Threonyl-tRNA synthetase, mitochondrial; threonine 0.0
3dsq_A288 Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t 9e-82
1tke_A224 Threonyl-tRNA synthetase; ligase; 1.46A {Escherich 3e-71
2cja_A522 Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE 2e-43
1nj1_A501 PROR, proline-tRNA synthetase, proline--tRNA ligas 3e-17
1hc7_A477 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 5e-16
1nj8_A459 Proline-tRNA synthetase, proline--tRNA ligase; cla 3e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
3ial_A 518 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 3e-13
3net_A465 Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas 3e-11
3kew_A241 DHHA1 domain protein; structural genomics, PSI-2, 3e-09
3lc0_A456 Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t 8e-09
1v95_A130 Nuclear receptor coactivator 5; coactivator indepe 1e-08
3mf2_A346 BLL0957 protein; aminoacyl-tRNA synthetase, seryl- 1e-07
1v4p_A157 Alanyl-tRNA synthetase; alanine-tRNA ligase, riken 5e-07
3qtc_A290 Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet 6e-07
1wu7_A434 Histidyl-tRNA synthetase; ligase, structural genom 2e-06
2ztg_A739 Alanyl-tRNA synthetase; class-II aminoacyl-tRNA sy 2e-05
2zze_A752 Alanyl-tRNA synthetase; ligase, hydrolase; HET: ML 8e-05
1g5h_A454 Mitochondrial DNA polymerase accessory subunit; in 1e-04
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Length = 642 Back     alignment and structure
 Score =  916 bits (2370), Expect = 0.0
 Identities = 245/586 (41%), Positives = 370/586 (63%), Gaps = 17/586 (2%)

Query: 78  KVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYDFDME-PLTDK 136
           ++ + T +  E L  IRH+CAH++  A+++L+P  K+ IGP I+NGFYYD D++  LT +
Sbjct: 56  QLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQE 115

Query: 137 DLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEIL-ESIIED-PITIYHI 194
           D++ ++K M  +  +N  +++++VS  EA+       E YK+ IL E+I  D    +Y  
Sbjct: 116 DVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFH 175

Query: 195 GEEWWDLCAGPHVETTGKINKKAVEL--------EGDEKKPMLQRIYGTAWENEEQLKAY 246
            E + D+C GPHV           +L         GD    MLQRIYGTAW +++ L AY
Sbjct: 176 EE-YVDMCRGPHVPNMRFC--HHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAY 232

Query: 247 LHFKEEAKRRDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYD 306
           L   EEA +RDHR++G+ LDL+ +Q+E   G+VFWH  G  +   +E F +    E+ Y 
Sbjct: 233 LQRLEEAAKRDHRKIGKQLDLYHMQEE-APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQ 291

Query: 307 LLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRD 366
            +  P +    LW+ +GH D Y++ M+   + E+  Y ++PMNCP H+ ++ + L+SYRD
Sbjct: 292 EVKGPFMMDRVLWEKTGHWDNYKDAMF-TTSSENREYCIKPMNCPGHVQIFNQGLKSYRD 350

Query: 367 FPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQ 426
            P+R+AE G+ +R E SGSLHGL RVRGFTQDDAHIFC E+QI+DE+   + L  ++   
Sbjct: 351 LPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYST 410

Query: 427 FGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKI 486
           FGF K  V LST+PEK +G D++W++A + L  AL++    ++   G GAFYGPKI+  +
Sbjct: 411 FGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTL 470

Query: 487 EDALGRKWQCSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYA 546
            D L R WQC T+Q+DF+LP R    YV  ++E+K P+MIHRA+LGS+ERF G+L E +A
Sbjct: 471 YDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFA 530

Query: 547 GDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEI-CHGERLPKLIRNAEKQKI 605
           G FP WL+P+Q  ++ +TD+Q EY NE+ +KL   GIR +     E++   IR    +++
Sbjct: 531 GFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRV 590

Query: 606 PLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT 651
           P M V G KEV++  V VR+R G +LG+M V++ I +++    +R+
Sbjct: 591 PYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRS 636
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Length = 645 Back     alignment and structure
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* Length = 401 Back     alignment and structure
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A Length = 471 Back     alignment and structure
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* Length = 460 Back     alignment and structure
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Length = 288 Back     alignment and structure
>1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A* Length = 224 Back     alignment and structure
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A Length = 522 Back     alignment and structure
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* Length = 501 Back     alignment and structure
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A Length = 477 Back     alignment and structure
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 Length = 459 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} Length = 518 Back     alignment and structure
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Length = 465 Back     alignment and structure
>3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase, protein structure initiative; 2.00A {Clostridium perfringens} Length = 241 Back     alignment and structure
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Length = 456 Back     alignment and structure
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 Length = 130 Back     alignment and structure
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* Length = 346 Back     alignment and structure
>1v4p_A Alanyl-tRNA synthetase; alanine-tRNA ligase, riken structural genomics/proteomics initiative RSGI, structural genomics; 1.45A {Pyrococcus horikoshii} SCOP: d.67.1.2 PDB: 1wxo_A 1v7o_A 1wnu_A 3rhu_A 3rfn_A Length = 157 Back     alignment and structure
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* Length = 290 Back     alignment and structure
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Length = 434 Back     alignment and structure
>2ztg_A Alanyl-tRNA synthetase; class-II aminoacyl-tRNA synthetase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: A5A; 2.20A {Archaeoglobus fulgidus} Length = 739 Back     alignment and structure
>2zze_A Alanyl-tRNA synthetase; ligase, hydrolase; HET: MLY; 2.16A {Pyrococcus horikoshii} PDB: 2zzf_A 2zzg_A* Length = 752 Back     alignment and structure
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* Length = 454 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query653
1qf6_A642 THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m 100.0
1nyr_A645 Threonyl-tRNA synthetase 1; ATP, threonine, ligase 100.0
3uh0_A460 Threonyl-tRNA synthetase, mitochondrial; threonine 100.0
1evl_A401 Threonyl-tRNA synthetase; amino acid recognition, 100.0
3a32_A471 Probable threonyl-tRNA synthetase 1; aeropyrum per 100.0
3ial_A 518 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 100.0
4hvc_A 519 Bifunctional glutamate/proline--tRNA ligase; ligas 100.0
1hc7_A477 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 100.0
2j3l_A572 Prolyl-tRNA synthetase; class II aminoacyl- T synt 100.0
1nj1_A501 PROR, proline-tRNA synthetase, proline--tRNA ligas 100.0
1nj8_A459 Proline-tRNA synthetase, proline--tRNA ligase; cla 100.0
2i4l_A458 Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud 100.0
4e51_A467 Histidine--tRNA ligase; seattle structural genomic 100.0
1qe0_A420 Histidyl-tRNA synthetase; class II tRNA synthetase 100.0
1ati_A505 Glycyl-tRNA synthetase; protein biosynthesis, liga 100.0
2zt5_A693 Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP 100.0
1h4v_B421 Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA 100.0
1htt_A423 Histidyl-tRNA synthetase; complex (tRNA synthetase 100.0
4g85_A517 Histidine-tRNA ligase, cytoplasmic; synthetase; 3. 100.0
1wu7_A434 Histidyl-tRNA synthetase; ligase, structural genom 100.0
3net_A465 Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas 100.0
1g5h_A454 Mitochondrial DNA polymerase accessory subunit; in 100.0
4g84_A464 Histidine--tRNA ligase, cytoplasmic; synthetase; 2 100.0
3ikl_A459 DNA polymerase subunit gamma-2, mitochondrial; tra 100.0
3lc0_A456 Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t 100.0
2dq3_A425 Seryl-tRNA synthetase; coiled-coil, homodimer, str 100.0
2dq0_A455 Seryl-tRNA synthetase; coiled-coil, homodimer, str 100.0
3vbb_A522 Seryl-tRNA synthetase, cytoplasmic; coiled-coil, l 100.0
1wle_A501 Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bo 100.0
1ses_A421 Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A 100.0
3lss_A484 Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, 100.0
1tke_A224 Threonyl-tRNA synthetase; ligase; 1.46A {Escherich 100.0
3err_A536 Fusion protein of microtubule binding domain from 100.0
3qne_A485 Seryl-tRNA synthetase, cytoplasmic; amino acid bio 100.0
3od1_A400 ATP phosphoribosyltransferase regulatory subunit; 100.0
2cja_A522 Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE 100.0
1z7m_A344 ATP phosphoribosyltransferase regulatory subunit; 100.0
3rac_A373 Histidine-tRNA ligase; structural genomics, PSI-bi 99.98
3mf2_A346 BLL0957 protein; aminoacyl-tRNA synthetase, seryl- 99.97
1v4p_A157 Alanyl-tRNA synthetase; alanine-tRNA ligase, riken 99.93
3kew_A241 DHHA1 domain protein; structural genomics, PSI-2, 99.92
2ztg_A739 Alanyl-tRNA synthetase; class-II aminoacyl-tRNA sy 99.89
2zze_A752 Alanyl-tRNA synthetase; ligase, hydrolase; HET: ML 99.88
2e1b_A216 PH0108, 216AA long hypothetical alanyl-tRNA synthe 99.88
1usy_A275 ATP phosphoribosyltransferase regulatory subunit; 99.88
3dsq_A288 Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t 99.74
1v95_A130 Nuclear receptor coactivator 5; coactivator indepe 99.65
3qtc_A290 Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet 99.44
1nnh_A294 Asparaginyl-tRNA synthetase-related peptide; struc 99.18
1wyd_A429 Hypothetical aspartyl-tRNA synthetase; archaea, LI 98.85
1x54_A434 Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe 98.83
1n9w_A422 Aspartyl-tRNA synthetase 2; biosynthetic protein; 98.75
1eov_A487 ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy 98.74
3a74_A493 Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, 98.7
1e1o_A504 Lysyl-tRNA synthetase, heat inducible; ligase, ami 98.56
3a5y_A345 GENX, putative lysyl-tRNA synthetase; aminoacyl-tR 98.43
3l4g_A508 Phenylalanyl-tRNA synthetase alpha chain; aminoacy 98.27
2xgt_A435 Asparaginyl-tRNA synthetase, cytoplasmic; ligase, 98.2
2du3_A534 O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l 98.19
3nem_A438 Aspartyl-tRNA synthetase; rossmann fold, OB fold, 98.17
3bju_A521 Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, 98.02
4ex5_A529 Lysine--tRNA ligase; structural genomics, niaid, n 98.0
1c0a_A585 Aspartyl tRNA synthetase; protein-RNA complex, lig 97.97
1l0w_A580 Aspartyl-tRNA synthetase; space-grown crystal, dim 97.96
4ah6_A 617 Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo 97.92
1b7y_A350 Phers, protein (phenylalanyl-tRNA synthetase); enz 97.88
2rhq_A294 Phenylalanyl-tRNA synthetase alpha chain; heterote 97.87
3m4p_A456 Ehasnrs, asparaginyl-tRNA synthetase, putative; am 97.84
3i7f_A548 Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-bi 97.78
1wwt_A88 Threonyl-tRNA synthetase, cytoplasmic; TGS domain, 97.65
2du7_A549 O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l 97.63
3ig2_A213 Phenylalanyl-tRNA synthetase beta chain; phers, MC 97.33
2odr_B 648 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 97.3
2odr_A 665 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 97.29
2odr_D 685 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 97.28
3ica_A213 Phenylalanyl-tRNA synthetase beta chain; APC61692. 97.27
2odr_C 701 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 97.27
3l4g_B589 Phenylalanyl-tRNA synthetase beta chain; aminoacyl 97.01
3pco_A327 Phenylalanyl-tRNA synthetase, alpha subunit; amino 96.77
2rhq_B795 Phenylalanyl-tRNA synthetase beta chain; heterotet 96.38
1b7y_B785 Phers, protein (phenylalanyl-tRNA synthetase); enz 95.42
3cmq_A415 Phenylalanyl-tRNA synthetase, mitochondrial; class 94.09
2kmm_A73 Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohy 91.44
3pco_B795 Phenylalanyl-tRNA synthetase, beta chain; aminoacy 90.53
3hvz_A78 Uncharacterized protein; alpha-beta protein, struc 86.54
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Back     alignment and structure
Probab=100.00  E-value=3.7e-118  Score=1015.93  Aligned_cols=599  Identities=41%  Similarity=0.781  Sum_probs=575.2

Q ss_pred             ccccccCCCCCcccccCcccccccccCCCCeEEEeecCChHHHHHHHHHHHHHHHHHHHHHcCCCEEEecccccCeeEEE
Q 046808           48 ATSVATEPAETPSVTQNGKVEQAQMTSETEKVVLPTNESNEQLLRIRHTCAHVMAMAVQKLYPDAKVTIGPWIENGFYYD  127 (653)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~~hS~~hlL~~A~~~l~~~~~~~~~~~~~~g~~~d  127 (653)
                      .+|..+|.+++++.+||++||+++|++.||+|++++..+.+|+.++|||++|||++|++++||++++++|+++++|||||
T Consensus        26 ~i~~~~~~~~~~~~vng~~~dl~~~l~~d~~~~~~~~~~~~~~~~~~HSa~HlL~~Al~~~~~~~~~~~G~~i~~gfy~D  105 (642)
T 1qf6_A           26 DIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYD  105 (642)
T ss_dssp             HHCHHHHHHCSEEEETTEEEETTSCBCSCEECCEECTTSHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCEETTEEEEE
T ss_pred             HhchhhhhheEEEEECCEEeccccccCCCceEEEeecCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCccCCeeEEE
Confidence            35556777888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecC-CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecHHHHHHHHHhcCChhhHHHh-hhcCC-CCEEEEEECCceeeeecc
Q 046808          128 FDM-EPLTDKDLKRIKKEMDRIIGRNLPLVREEVSRDEAKSRIMAIKEPYKMEIL-ESIIE-DPITIYHIGEEWWDLCAG  204 (653)
Q Consensus       128 ~~~-~~lt~~~l~~Ie~~m~~iI~~~~pI~~~~~~~~eA~~~~~~~~~~~k~~ll-~~~~~-~~v~i~~ig~~~~d~c~G  204 (653)
                      |+. .++|++|+++||++||++|++|+||++.+++++||+++|+..+++||++|+ +..++ +.|++|+|| +|.|+|+|
T Consensus       106 f~~~~~~t~edl~~IE~~m~~iI~~~~~v~~~~~~~~eA~~~~~~~~e~yk~~li~~~~~~~~~v~vy~~g-~~~dlC~G  184 (642)
T 1qf6_A          106 VDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHE-EYVDMCRG  184 (642)
T ss_dssp             EECSSCCCHHHHHHHHHHHHHHHHHTCBEEEEECCHHHHHHHHHHHTCHHHHHHHHHHSCTTCCCEEEEET-TEEECCSS
T ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEecHHHHHHHhhhhCCcchhhhhhcccCCCCceEEEEEC-CEEEecCC
Confidence            997 789999999999999999999999999999999999999999999999999 77775 589999999 89999999


Q ss_pred             ccccccccccccceEEe--------ecCCccceeeecccccccHHHHHHhhhhhHHhhhchhHhhhcccCcccccccccC
Q 046808          205 PHVETTGKINKKAVELE--------GDEKKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDEAGG  276 (653)
Q Consensus       205 ~hv~~Tg~i~~~~f~l~--------~~~k~~~l~Ri~g~~~~~~~~L~~~~e~~eeakk~~h~~l~~~l~l~~~~~~~~~  276 (653)
                      |||+|||+|  +.|+|.        |++++.+++|+||++|++++++++|++..++++++||++||++|++|+|+ ..++
T Consensus       185 pHv~~Tg~I--~~fkl~~~~~~yw~g~~~~~~l~r~~g~~~~~~~~l~~~~~~~eea~~rdH~~lg~~l~l~~~~-~~~~  261 (642)
T 1qf6_A          185 PHVPNMRFC--HHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQ-EEAP  261 (642)
T ss_dssp             CCCSBGGGC--CSEEEEEEEEEEGGGCTTSCEEEEEEEEECSSHHHHHHHHHHHHHHHTTCHHHHHHHTTCEECC-TTST
T ss_pred             CccCCCCcc--eeEEEeeeccccccCccCCceeEeeeccccCchhHHhhhhhhhhccccCCHHHHHHhcCccccc-cCCC
Confidence            999999999  999998        67788999999999999999999999999999999999999999999995 5799


Q ss_pred             cceecCccccHHHHHHHHHHHHHHHhcCCeEEecCccCchhhhhhcCcccccccccceecccCCceEEeccCChHHHHHH
Q 046808          277 GLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILV  356 (653)
Q Consensus       277 G~~~~lP~g~~l~~~I~~~~~~~~~~~G~~~I~tP~le~~~l~~~sg~~~~~~~~~y~~~d~~~~~l~LrP~~~~~~~~~  356 (653)
                      |+++|+|.|+.++++|+++|++.+.++||++|.||+|++.++|++||||+.|.++||. .|+++++++||||+|++++++
T Consensus       262 G~~~~lP~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~my~-~d~~~~~~~LrP~~~~~~~~~  340 (642)
T 1qf6_A          262 GMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPGHVQI  340 (642)
T ss_dssp             TCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEE-EEETTEEEEECSSSHHHHHHH
T ss_pred             CcEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCcccccccccee-eecCCceEEecCCCCHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999 899999999999999999999


Q ss_pred             HHhhhcccCCCCcEEEEeeeeeecCCCCCCCCcceeceeEEcceeeeeCchhHHHHHHHHHHHHHHHHHHcCCCeEEEEe
Q 046808          357 YQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVNL  436 (653)
Q Consensus       357 ~~~~~~s~~~lP~rl~~~g~~fR~E~~~~~~GL~R~REF~q~d~~ifg~~~~~~d~~~e~l~~~~~il~~lGl~~~~v~l  436 (653)
                      |+++++||++||+|+||+|+|||+|.+++++||+|+|||+|.|+|+||+++++.+++.+++.++.++|+.|||+++.+.+
T Consensus       341 ~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~~~~~~e~~~~i~~~~~i~~~lGl~~~~v~l  420 (642)
T 1qf6_A          341 FNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKL  420 (642)
T ss_dssp             HTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHGGGTCCCCEEEE
T ss_pred             HHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEE
Confidence            99999999999999999999999999955699999999999999999999998888889999999999999997799999


Q ss_pred             cCCcccccCCchhHHHHHHHHHHHHHhcCCceEEcCCCcccccceeeEEEecccCCcccccceEEEecCCcccccEEECC
Q 046808          437 STKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDIVYVDS  516 (653)
Q Consensus       437 ~~~~~~~~g~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~g~~~d~~~~d~~g~~~~~~~i~~d~~~~~r~d~~~~~~  516 (653)
                      ++++.++.|+++.|+.+...++++|+..|++|.+++++++||||++|+.+.|++|+.|+|+|+++||++++|||++|.+.
T Consensus       421 ~~~~e~~~g~~e~w~~a~~~l~~~l~~~g~~~~~~~g~~afygpk~d~~~~d~~G~~~~~gti~~df~l~~r~~~~y~~~  500 (642)
T 1qf6_A          421 STRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGE  500 (642)
T ss_dssp             ECCCSSCCSCHHHHHHHHHHHHHHHHTTTCCCEEETTCSCTTCCEEEEEEECTTCCEEEEEEEEEESSHHHHTTCCEECT
T ss_pred             ecCcccccCCHHHHHHHHHHHHHHHHHcCCCcEEcCCCcccccCcccEEEEccCCceEEeeeEEEeccCCccCCCEEEec
Confidence            99998889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCEEEEecccCchHHHHHHHHHhhcCCCCCCCCCceEEEEecChhhHHHHHHHHHHHHhCCCeEEEeC-CCCHHH
Q 046808          517 NSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARVLPVTDTQLEYCNEVIKKLKTNGIRAEICH-GERLPK  595 (653)
Q Consensus       517 ~g~~~~p~~g~~~i~GgieRli~~L~e~~~~~~P~~lap~~v~Vi~~~~~~~~~a~~la~~Lr~~Gi~v~~d~-~~~~~k  595 (653)
                      +|+++.|+|+|+|++||++|++++|+|++++.||.|++|+||+|+|++++..++|.+|+++||++|++|++|+ ++++|+
T Consensus       501 ~g~~~~P~~~hrai~G~ieR~i~~liE~~~~~~P~~laP~qv~vipi~~~~~~~a~~v~~~L~~~Gi~v~~D~~~~~~g~  580 (642)
T 1qf6_A          501 DNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGF  580 (642)
T ss_dssp             TSCEECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESSHHHHHHHHHHHHHHHTTTCCEEEECCSSCHHH
T ss_pred             CCCCcCcEEEEeccCCCHHHHHHHHHHHhcCCCCcccCCceEEEEEeCHHHHHHHHHHHHHHHhCCCEEEEECCCCCHHH
Confidence            9988999999988889999999999999999999999999999999999999999999999999999999999 899999


Q ss_pred             HHHHHHHcCCCEEEEECcccccCCeEEEEECCCCceeeeeHHHHHHHHHHHHhhhc
Q 046808          596 LIRNAEKQKIPLMAVVGAKEVDAQTVTVRSRFGGELGTMKVDDFISRIKSATENRT  651 (653)
Q Consensus       596 k~~~A~~~gip~~iiiG~~e~~~~~V~vk~~~~~~q~~v~~~el~~~i~~~~~~~~  651 (653)
                      |+++|++.|+||+||||++|+++|+|+||+|++++|..++++++++.|++.++++.
T Consensus       581 kir~a~~~g~p~~ivvG~~E~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~~~  636 (642)
T 1qf6_A          581 KIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRS  636 (642)
T ss_dssp             HHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSCEEEEECHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999888763
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Back     alignment and structure
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* Back     alignment and structure
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* Back     alignment and structure
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A Back     alignment and structure
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} Back     alignment and structure
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} Back     alignment and structure
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A Back     alignment and structure
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* Back     alignment and structure
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* Back     alignment and structure
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 Back     alignment and structure
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* Back     alignment and structure
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} Back     alignment and structure
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 Back     alignment and structure
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* Back     alignment and structure
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A Back     alignment and structure
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A Back     alignment and structure
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* Back     alignment and structure
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens} Back     alignment and structure
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Back     alignment and structure
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Back     alignment and structure
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* Back     alignment and structure
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens} Back     alignment and structure
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens} Back     alignment and structure
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Back     alignment and structure
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus} Back     alignment and structure
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A Back     alignment and structure
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens} Back     alignment and structure
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} Back     alignment and structure
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A Back     alignment and structure
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A* Back     alignment and structure
>1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A* Back     alignment and structure
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A Back     alignment and structure
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A Back     alignment and structure
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} Back     alignment and structure
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A Back     alignment and structure
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* Back     alignment and structure
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* Back     alignment and structure
>1v4p_A Alanyl-tRNA synthetase; alanine-tRNA ligase, riken structural genomics/proteomics initiative RSGI, structural genomics; 1.45A {Pyrococcus horikoshii} SCOP: d.67.1.2 PDB: 1wxo_A 1v7o_A 1wnu_A 3rhu_A 3rfn_A Back     alignment and structure
>3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase, protein structure initiative; 2.00A {Clostridium perfringens} Back     alignment and structure
>2ztg_A Alanyl-tRNA synthetase; class-II aminoacyl-tRNA synthetase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: A5A; 2.20A {Archaeoglobus fulgidus} Back     alignment and structure
>2zze_A Alanyl-tRNA synthetase; ligase, hydrolase; HET: MLY; 2.16A {Pyrococcus horikoshii} PDB: 2zzf_A 2zzg_A* Back     alignment and structure
>2e1b_A PH0108, 216AA long hypothetical alanyl-tRNA synthetase; zinc-binding motif, trans-editing enzyme, structural genomics, NPPSFA; 2.70A {Pyrococcus horikoshii} SCOP: b.43.3.6 d.67.1.2 Back     alignment and structure
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* Back     alignment and structure
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Back     alignment and structure
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 Back     alignment and structure
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* Back     alignment and structure
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* Back     alignment and structure
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} Back     alignment and structure
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A Back     alignment and structure
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* Back     alignment and structure
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* Back     alignment and structure
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* Back     alignment and structure
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A Back     alignment and structure
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* Back     alignment and structure
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} Back     alignment and structure
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* Back     alignment and structure
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* Back     alignment and structure
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* Back     alignment and structure
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} Back     alignment and structure
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} Back     alignment and structure
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* Back     alignment and structure
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A Back     alignment and structure
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens} Back     alignment and structure
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A* Back     alignment and structure
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A* Back     alignment and structure
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A Back     alignment and structure
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} Back     alignment and structure
>1wwt_A Threonyl-tRNA synthetase, cytoplasmic; TGS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ligase; NMR {Homo sapiens} Back     alignment and structure
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii} Back     alignment and structure
>3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis} Back     alignment and structure
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis} Back     alignment and structure
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} Back     alignment and structure
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} Back     alignment and structure
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B* Back     alignment and structure
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B* Back     alignment and structure
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A Back     alignment and structure
>2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis} Back     alignment and structure
>3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} Back     alignment and structure
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 653
d1qf6a4291 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (Th 1e-105
d1nyra4291 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (Th 3e-89
d1g5ha2290 d.104.1.1 (A:41-330) The aaRS-like accessory subun 6e-44
d1nyra3179 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrR 5e-43
d1b76a2331 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) 1e-41
d1nj8a3268 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) 8e-34
d1tkea2162 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrR 2e-33
d1hc7a2272 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) 7e-33
d1nj1a3265 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS 8e-31
d1nyra1113 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (Thr 3e-21
d1qf6a1110 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (Thr 5e-21
d1seta2311 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS 3e-16
d1v4pa_151 d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeo 9e-15
d1qe0a195 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (His 2e-14
d1g5ha1127 c.51.1.1 (A:343-469) The aaRS-like accessory subun 3e-14
d1h4vb196 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (His 5e-14
d1nj8a1126 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS 5e-13
d1wu7a197 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (His 5e-13
d1kmma199 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (His 1e-12
d1nj1a1127 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS 4e-12
d1atia1111 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS 2e-11
d1hc7a1127 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS 4e-09
d1z7ma1318 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase 7e-06
d1atia2394 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) 2e-04
d1qe0a2325 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisR 0.002
>d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} Length = 291 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Threonyl-tRNA synthetase (ThrRS)
species: Escherichia coli [TaxId: 562]

 Score =  320 bits (820), Expect = e-105
 Identities = 136/292 (46%), Positives = 197/292 (67%), Gaps = 2/292 (0%)

Query: 256 RDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAK 315
           RDHR++G+ LDL+ +Q+E   G+VFWH  G  +   +E F +    E+ Y  +  P +  
Sbjct: 1   RDHRKIGKQLDLYHMQEE-APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMD 59

Query: 316 ADLWKISGHLDFYRENMYDQMNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELG 375
             LW+ +GH D Y++ M+   + E+  Y ++PMNCP H+ ++ + L+SYRD P+R+AE G
Sbjct: 60  RVLWEKTGHWDNYKDAMF-TTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFG 118

Query: 376 TVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRAVLDLTEEILLQFGFNKYEVN 435
           + +R E SGSLHGL RVRGFTQDDAHIFC E+QI+DE+   + L  ++   FGF K  V 
Sbjct: 119 SCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVK 178

Query: 436 LSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQ 495
           LST+PEK +G D++W++A + L  AL++    ++   G GAFYGPKI+  + D L R WQ
Sbjct: 179 LSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQ 238

Query: 496 CSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAG 547
           C T+Q+DF+LP R    YV  ++E+K P+MIHRA+LGS+ERF G+L E +AG
Sbjct: 239 CGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAG 290
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} Length = 291 Back     information, alignment and structure
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 290 Back     information, alignment and structure
>d1nyra3 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Length = 179 Back     information, alignment and structure
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Length = 331 Back     information, alignment and structure
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Length = 268 Back     information, alignment and structure
>d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} Length = 162 Back     information, alignment and structure
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} Length = 272 Back     information, alignment and structure
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Length = 265 Back     information, alignment and structure
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 113 Back     information, alignment and structure
>d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} Length = 311 Back     information, alignment and structure
>d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 151 Back     information, alignment and structure
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 95 Back     information, alignment and structure
>d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 Back     information, alignment and structure
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 96 Back     information, alignment and structure
>d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Length = 126 Back     information, alignment and structure
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 97 Back     information, alignment and structure
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 99 Back     information, alignment and structure
>d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Length = 127 Back     information, alignment and structure
>d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 111 Back     information, alignment and structure
>d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} Length = 127 Back     information, alignment and structure
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} Length = 318 Back     information, alignment and structure
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Length = 394 Back     information, alignment and structure
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} Length = 325 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query653
d1qf6a4291 Threonyl-tRNA synthetase (ThrRS) {Escherichia coli 100.0
d1nyra4291 Threonyl-tRNA synthetase (ThrRS) {Staphylococcus a 100.0
d1nj8a3268 Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanoc 100.0
d1nj1a3265 Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanoth 100.0
d1b76a2331 Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil 100.0
d1seta2311 Seryl-tRNA synthetase (SerRS) {Thermus thermophilu 100.0
d1nyra3179 Threonyl-tRNA synthetase (ThrRS), second 'addition 100.0
d1hc7a2272 Prolyl-tRNA synthetase (ProRS) {Thermus thermophil 100.0
d1tkea2162 Threonyl-tRNA synthetase (ThrRS), second 'addition 100.0
d1g5ha2290 The aaRS-like accessory subunit of mitochondrial p 99.95
d1h4vb2324 Histidyl-tRNA synthetase (HisRS) {Thermus thermoph 99.95
d1wu7a2327 Histidyl-tRNA synthetase (HisRS) {Archaeon Thermop 99.95
d1qe0a2325 Histidyl-tRNA synthetase (HisRS) {Staphylococcus a 99.94
d1z7ma1318 ATP phosphoribosyltransferase regulatory subunit H 99.94
d1kmma2322 Histidyl-tRNA synthetase (HisRS) {Escherichia coli 99.93
d1atia2394 Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil 99.92
d1nyra1113 Threonyl-tRNA synthetase (ThrRS), C-terminal domai 99.9
d1qf6a1110 Threonyl-tRNA synthetase (ThrRS), C-terminal domai 99.89
d1v4pa_151 Hypothetical protein PH0574 {Archaeon Pyrococcus h 99.86
d1nj1a1127 Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Me 99.84
d1nj8a1126 Prolyl-tRNA synthetase (ProRS) domain {Archaeon (M 99.81
d1g5ha1127 The aaRS-like accessory subunit of mitochondrial p 99.8
d1hc7a1127 Prolyl-tRNA synthetase (ProRS) domain {Thermus the 99.78
d2e1ba2129 AlaX-M trans-editing enzyme, C-terminal domain {Py 99.78
d1atia1111 Glycyl-tRNA synthetase (GlyRS), C-terminal domain 99.76
d1kmma199 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.74
d1wu7a197 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.72
d1qe0a195 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.71
d1h4vb196 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.7
d1usya_275 ATP phosphoribosyltransferase regulatory subunit H 99.7
d1c0aa3346 Aspartyl-tRNA synthetase (AspRS) {Escherichia coli 98.15
d1nnha_293 Hypothetical protein PF1951 {Archaeon Pyrococcus f 98.01
d1v95a_130 Nuclear receptor coactivator 5 (KIAA1637) {Human ( 97.96
d1eova2353 Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (S 97.94
d1b8aa2335 Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococ 97.93
d1e1oa2342 Lysyl-tRNA synthetase (LysRS) {Escherichia coli, g 97.91
d1l0wa3356 Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph 97.87
d1jjca_266 Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS 97.77
d1n9wa2304 Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph 97.35
d1tkea162 Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi 95.52
d1nyra259 Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi 95.27
d1jjcb5207 Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, 94.83
>d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Threonyl-tRNA synthetase (ThrRS)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-57  Score=464.85  Aligned_cols=290  Identities=47%  Similarity=0.918  Sum_probs=278.5

Q ss_pred             chhHhhhcccCcccccccccCcceecCccccHHHHHHHHHHHHHHHhcCCeEEecCccCchhhhhhcCccccccccccee
Q 046808          256 RDHRRLGQDLDLFSIQDEAGGGLVFWHPKGSIVRHIIEDFWKKSHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMYDQ  335 (653)
Q Consensus       256 ~~h~~l~~~l~l~~~~~~~~~G~~~~lP~g~~l~~~I~~~~~~~~~~~G~~~I~tP~le~~~l~~~sg~~~~~~~~~y~~  335 (653)
                      |||++||++||||+| +..++|++.|+|.|++++++|++++++.+.+.||++|.||.|.+.++|++||||+.|.++||..
T Consensus         1 rDH~~lg~~l~lf~~-~~~~~G~~~~lP~G~~l~~~L~~~i~e~~~~~G~~eV~~P~L~~~~l~~~sG~~~~~~~~~~~~   79 (291)
T d1qf6a4           1 RDHRKIGKQLDLYHM-QEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTT   79 (291)
T ss_dssp             TCHHHHHHHTTCEEC-CTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEEE
T ss_pred             CChHHHHHhCCCccc-cCCCCcceEEccCHHHHHHHHHHHHHHHHHHcCCEEEEcccccchhHHhhhchhhhccchhccc
Confidence            699999999999999 4578999999999999999999999999999999999999999999999999999999999986


Q ss_pred             cccCCceEEeccCChHHHHHHHHhhhcccCCCCcEEEEeeeeeecCCCCCCCCcceeceeEEcceeeeeCchhHHHHHHH
Q 046808          336 MNIEDELYQLRPMNCPYHILVYQRKLQSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRA  415 (653)
Q Consensus       336 ~d~~~~~l~LrP~~~~~~~~~~~~~~~s~~~lP~rl~~~g~~fR~E~~~~~~GL~R~REF~q~d~~ifg~~~~~~d~~~e  415 (653)
                      . .++++++|+||+|+.++.+++++++||++||+|+||+++|||+|.++..+||+|+|||+|.|+|+||.+++..+++.+
T Consensus        80 ~-~~~~~~~L~Pt~e~~~~~~~~~~~~sy~~LPl~~~q~~~~fR~E~~~~~~Gl~R~reF~~~d~h~f~~~e~~~~e~~~  158 (291)
T d1qf6a4          80 S-SENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNG  158 (291)
T ss_dssp             E-ETTEEEEECSSSHHHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECGGGHHHHHHH
T ss_pred             c-ccchhhcccccCcHHHHHHHHccccchhhcCeeEeecceeeecccccccccccccccceeccceeEecchhhHHHHHH
Confidence            5 456889999999999999999999999999999999999999998876689999999999999999999999998899


Q ss_pred             HHHHHHHHHHHcCCCeEEEEecCCcccccCCchhHHHHHHHHHHHHHhcCCceEEcCCCcccccceeeEEEecccCCccc
Q 046808          416 VLDLTEEILLQFGFNKYEVNLSTKPEKAVGGDDIWEKATSALRDALDDKGWDYQIDEGGGAFYGPKIDLKIEDALGRKWQ  495 (653)
Q Consensus       416 ~l~~~~~il~~lGl~~~~v~l~~~~~~~~g~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~g~~~d~~~~d~~g~~~~  495 (653)
                      +++++.++++.|||+.+.+.++++++++.|+++.|+.+...+.+.+.+.|+++..+.+.+++|+|++++.+.|..|+.|+
T Consensus       159 ~~~~~~~i~~~lGl~~~~v~~s~~~~~~~~~~e~w~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~k~~~~~~~~~gr~~~  238 (291)
T d1qf6a4         159 CIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQ  238 (291)
T ss_dssp             HHHHHHHHHGGGTCCCCEEEEECCCSSCCSCHHHHHHHHHHHHHHHHTTTCCCEEETTCSCTTCCEEEEEEECTTCCEEE
T ss_pred             HHHHHHHHHHHcCCceEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHcCCCceecccccccccccccccccccCCCeEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceEEEecCCcccccEEECCCCCcccCEEEEecccCchHHHHHHHHHhhcC
Q 046808          496 CSTIQVDFNLPQRFDIVYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAG  547 (653)
Q Consensus       496 ~~~i~~d~~~~~r~d~~~~~~~g~~~~p~~g~~~i~GgieRli~~L~e~~~~  547 (653)
                      ++|+|+||++++|||++|.+++|+++.|.|+|+|++|++||++++|+|+++|
T Consensus       239 ~~tiqld~~~~~rf~~~y~~~dg~~~~pvmiHra~~GsieR~ia~LiE~~~g  290 (291)
T d1qf6a4         239 CGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAG  290 (291)
T ss_dssp             EEEEEEESSHHHHTTCCEECTTSCEECCEEEEEEEEEEHHHHHHHHHHHHTT
T ss_pred             eceeEEeccchhhhCCEEECCCCCCcCCEEEEcCCCCcHHHHHHHHHHhhCC
Confidence            9999999999999999999999999999999999999999999999999876
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Back     information, alignment and structure
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Back     information, alignment and structure
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} Back     information, alignment and structure
>d1nyra3 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Back     information, alignment and structure
>d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Back     information, alignment and structure
>d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1v95a_ c.51.1.1 (A:) Nuclear receptor coactivator 5 (KIAA1637) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure
>d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} Back     information, alignment and structure
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} Back     information, alignment and structure
>d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} Back     information, alignment and structure
>d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nyra2 d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1jjcb5 d.104.1.1 (B:475-681) Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure