Citrus Sinensis ID: 046816

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90------
Protein Sequence
MAAAAAAATLTHSASAPPQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCARLVREQRARFYIMRRCVTMLICWRDYNDS
Secondary Structure (PSIPRED)
cHHHHHHHHHcccccccccccHHHHHccccccccccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHccccccccccEccccHEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MAAAAAAATlthsasappqfyldekwklskkegssrsrssssstTTAFIKSASTSARRRCSFSRKCARLVREQRARFYIMRRCVTMLICWRDYNDS
Flexible Loop (DISEMBL)
MAAAAAaatlthsasappqfyLDEKWKLSKkegssrsrssssstttafiksastsarrrcsfsrkcarlvreqrarfyimRRCVTMLICWRDYNDS
Low Complexity Region (SEG)
MaaaaaaatlthsasaPPQFYLDEKWKLskkegssrsrssssstttafiksastsaRRRCSFSRKCARLVREQRARFYIMRRCVTMLICWRDYNDS
Disordered region (IsUnstruct)
***********************************************************CSFSRKCARLVREQRARFYIMRRCVTMLICWRDY***
Disordered Region (DISOPRED)
***********************************************************************EQRARFYIMRRCVTMLICWRD****
Disordered Region (DISEMBL)
*************ASAPPQFYLDEKWK***********************************SRKCARLVREQRARFYIMRRCVTMLICWRDYNDS
Disordered Region (DISPRO)
*****************PQFY*DE*WKL*******************************CSFSRKCARLVREQRARFYIMRRCVTMLICWRDY***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAAAAAAATLTHSASAPPQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCARLVREQRARFYIMRRCVTMLICWRDYNDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
255581537	88	conserved hypothetical protein [Ricinus	0.906	0.988	0.744	5e-28
224112731	84	predicted protein [Populus trichocarpa]	0.864	0.988	0.755	2e-26
224098445	84	predicted protein [Populus trichocarpa]	0.843	0.964	0.75	4e-26
388491838	86	unknown [Lotus japonicus]	0.864	0.965	0.686	3e-23
225449460	83	PREDICTED: uncharacterized protein LOC10	0.739	0.855	0.721	8e-23
147798371	82	hypothetical protein VITISV_024942 [Viti	0.739	0.865	0.721	8e-23
356501073	84	PREDICTED: uncharacterized protein LOC10	0.875	1.0	0.701	6e-22
357492293	89	hypothetical protein MTR_5g080260 [Medic	0.770	0.831	0.696	7e-22
356551701	81	PREDICTED: uncharacterized protein LOC10	0.843	1.0	0.655	1e-21
351723583	110	uncharacterized protein LOC100526995 [Gl	0.979	0.854	0.561	1e-17

>gi|255581537|ref|XP_002531574.1| conserved hypothetical protein [Ricinus communis] gi|223528804|gb|EEF30810.1| conserved hypothetical protein [Ricinus communis]

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/90 (74%), Positives = 81/90 (90%), Gaps = 3/90 (3%)

Query: 7  AATLTHSASAPPQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKC 66
          A++LTHSASAPPQFY DEKWKLSKKEGSS    S  S+T+  +K++S+S++RRCSF+RKC
Sbjct: 2  ASSLTHSASAPPQFYFDEKWKLSKKEGSS---RSVRSSTSPLMKNSSSSSQRRCSFTRKC 58

Query: 67 ARLVREQRARFYIMRRCVTMLICWRDYNDS 96
          ARLV+EQRARFYI+RRCVTMLICWRDY+DS
Sbjct: 59 ARLVKEQRARFYIVRRCVTMLICWRDYSDS 88

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112731|ref|XP_002316275.1| predicted protein [Populus trichocarpa] gi|222865315|gb|EEF02446.1| predicted protein [Populus trichocarpa]

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/90 (75%), Positives = 76/90 (84%), Gaps = 7/90 (7%)

Query: 7  AATLTHSASAPPQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKC 66
          A TLTHSAS PPQFY DEKWKLSKKEGSSRSRSS+SS           S++RRCSF+RKC
Sbjct: 2  AITLTHSASEPPQFYFDEKWKLSKKEGSSRSRSSTSSLM-------KDSSQRRCSFTRKC 54

Query: 67 ARLVREQRARFYIMRRCVTMLICWRDYNDS 96
          ARLV+EQRARFYI+RRCVTMLICWRDY+D+
Sbjct: 55 ARLVKEQRARFYIVRRCVTMLICWRDYSDA 84

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098445|ref|XP_002311177.1| predicted protein [Populus trichocarpa] gi|222850997|gb|EEE88544.1| predicted protein [Populus trichocarpa]

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/88 (75%), Positives = 73/88 (82%), Gaps = 7/88 (7%)

Query: 9  TLTHSASAPPQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCAR 68
          TL HSASAPPQ Y DEKWKL+KKEGSSRSRSS+SS           S++RRCSF+RKCAR
Sbjct: 4  TLAHSASAPPQLYFDEKWKLTKKEGSSRSRSSTSSLM-------KNSSQRRCSFTRKCAR 56

Query: 69 LVREQRARFYIMRRCVTMLICWRDYNDS 96
          LV+EQRARFYIMRRCV MLICWRDYND+
Sbjct: 57 LVKEQRARFYIMRRCVAMLICWRDYNDA 84

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491838|gb|AFK33985.1| unknown [Lotus japonicus]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/86 (68%), Positives = 69/86 (80%), Gaps = 3/86 (3%)

Query: 11 THSASAPPQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCARLV 70
          T  ++APP  Y DEKWKLSKKEGS     SSSST   F+K  S+  +R+C+F+RKCARLV
Sbjct: 4  TEGSAAPPPLYFDEKWKLSKKEGSFTRSRSSSSTN--FMKK-SSQEQRKCAFARKCARLV 60

Query: 71 REQRARFYIMRRCVTMLICWRDYNDS 96
          +EQRARFYIMRRCVTMLICWRDY+DS
Sbjct: 61 KEQRARFYIMRRCVTMLICWRDYSDS 86

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449460|ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263265 [Vitis vinifera]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 8/79 (10%)

Query: 18 PQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCARLVREQRARF 77
          PQFYLDEKWKLSKKEGS RSRSS+S            S++RRCSF+RKCA LV+EQRARF
Sbjct: 13 PQFYLDEKWKLSKKEGS-RSRSSTSPLMR-------NSSQRRCSFTRKCASLVKEQRARF 64

Query: 78 YIMRRCVTMLICWRDYNDS 96
          YI+RRCVTMLICWR+Y+DS
Sbjct: 65 YIVRRCVTMLICWREYSDS 83

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147798371|emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 8/79 (10%)

Query: 18 PQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCARLVREQRARF 77
          PQFYLDEKWKLSKKEGS RSRSS+S            S++RRCSF+RKCA LV+EQRARF
Sbjct: 12 PQFYLDEKWKLSKKEGS-RSRSSTSPLMR-------NSSQRRCSFTRKCASLVKEQRARF 63

Query: 78 YIMRRCVTMLICWRDYNDS 96
          YI+RRCVTMLICWR+Y+DS
Sbjct: 64 YIVRRCVTMLICWREYSDS 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501073|ref|XP_003519353.1| PREDICTED: uncharacterized protein LOC100805174 [Glycine max]

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/87 (70%), Positives = 73/87 (83%), Gaps = 3/87 (3%)

Query: 10 LTHSASAPPQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCARL 69
          +  S S  P  Y DEKWKLSKKEGS+RS   SSST+T FIK++S+S +RRC+F+ KCA+L
Sbjct: 1  MASSVSTTPPMYFDEKWKLSKKEGSTRS--RSSSTSTPFIKNSSSS-QRRCAFASKCAKL 57

Query: 70 VREQRARFYIMRRCVTMLICWRDYNDS 96
          V+EQRARFYIMRRCVTMLICWRDY+DS
Sbjct: 58 VKEQRARFYIMRRCVTMLICWRDYSDS 84

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492293|ref|XP_003616435.1| hypothetical protein MTR_5g080260 [Medicago truncatula] gi|355517770|gb|AES99393.1| hypothetical protein MTR_5g080260 [Medicago truncatula]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/79 (69%), Positives = 68/79 (86%), Gaps = 5/79 (6%)

Query: 18 PQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCARLVREQRARF 77
          P  Y DEKWKLSKKEGS+     S S++++FIK+ ST+ +R+C+F+RKCARLV+EQRARF
Sbjct: 16 PPLYFDEKWKLSKKEGST----RSKSSSSSFIKNTSTT-QRKCAFARKCARLVKEQRARF 70

Query: 78 YIMRRCVTMLICWRDYNDS 96
          YIMRRCVTMLICWRDY+DS
Sbjct: 71 YIMRRCVTMLICWRDYSDS 89

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551701|ref|XP_003544212.1| PREDICTED: uncharacterized protein LOC100803152 [Glycine max] gi|255645311|gb|ACU23152.1| unknown [Glycine max]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/87 (65%), Positives = 69/87 (79%), Gaps = 6/87 (6%)

Query: 10 LTHSASAPPQFYLDEKWKLSKKEGSSRSRSSSSSTTTAFIKSASTSARRRCSFSRKCARL 69
          +  S S  P  Y DEKWKLSKKEGS+     S S++T FIK++S+  +RRC+F+ KCARL
Sbjct: 1  MASSVSTTPPLYFDEKWKLSKKEGST----RSRSSSTPFIKNSSS--QRRCAFASKCARL 54

Query: 70 VREQRARFYIMRRCVTMLICWRDYNDS 96
          V+EQRARFYIMRRCVTMLICWRDY+DS
Sbjct: 55 VKEQRARFYIMRRCVTMLICWRDYSDS 81

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723583|ref|NP_001237028.1| uncharacterized protein LOC100526995 [Glycine max] gi|255631328|gb|ACU16031.1| unknown [Glycine max]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 4/98 (4%)

Query: 2   AAAAAAATLTHSASAPPQFYLD--EKW-KLSKKEGSSRSRSSSSSTTTAFIKSASTSARR 58
              A     T  ++ PP  YL   EKW KLSKKEG S + SSSS    +   S+S++ +R
Sbjct: 14  GTTAGINNNTDQSTVPPIMYLSNSEKWNKLSKKEGRSSTTSSSSLMKNSSSSSSSST-QR 72

Query: 59  RCSFSRKCARLVREQRARFYIMRRCVTMLICWRDYNDS 96
           +C+F+RKCARLV+EQRARFYIMRRCV MLICW +YNDS
Sbjct: 73  KCAFARKCARLVKEQRARFYIMRRCVIMLICWHEYNDS 110

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
TAIR|locus:505006308	87	RTFL8 "AT2G39705" [Arabidopsis	0.760	0.839	0.519	1.3e-15
TAIR|locus:4010713835	79	RTFL7 "AT3G55515" [Arabidopsis	0.364	0.443	0.771	1.3e-11
TAIR|locus:504955897	115	RTFL2 "AT2G29125" [Arabidopsis	0.375	0.313	0.583	2.6e-10
TAIR|locus:2024967	107	RTFL3 "AT1G07490" [Arabidopsis	0.395	0.355	0.473	3.6e-09
TAIR|locus:1006230132	53	ROT4 "AT2G36985" [Arabidopsis	0.354	0.641	0.558	9.7e-09
TAIR|locus:4010713749	48	RTFL10 "AT3G14362" [Arabidopsi	0.364	0.729	0.6	8.7e-08
TAIR|locus:4010713883	55	RTFL12 "AT4G13395" [Arabidopsi	0.406	0.709	0.461	3.8e-07
TAIR|locus:1005716552	40	RTFL16 "AT3G25717" [Arabidopsi	0.375	0.9	0.555	4.8e-07
TAIR|locus:2148388	144	RTFL5 "AT5G59510" [Arabidopsis	0.385	0.256	0.459	6.1e-07
TAIR|locus:4010713928	62	RTFL6 "AT4G35783" [Arabidopsis	0.354	0.548	0.5	1.6e-06

TAIR|locus:505006308 RTFL8 "AT2G39705" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query:    21 YLDEKWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRCSFSRKCARLVREQRARFYIM 80
             +LDEKWKL                            + RC+F+RKCARLV+EQRARFYIM
Sbjct:    14 HLDEKWKLSKKDGGASRITRSSSTSSSSFNGKK---QGRCAFTRKCARLVKEQRARFYIM 70

Query:    81 RRCVTMLICWRD-YNDS 96
             RRCV MLICWRD Y+DS
Sbjct:    71 RRCVIMLICWRDNYSDS 87

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0048367 "shoot system development" evidence=ISS

GO:0009062 "fatty acid catabolic process" evidence=RCA

GO:0016925 "protein sumoylation" evidence=RCA

TAIR|locus:4010713835 RTFL7 "AT3G55515" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 27/35 (77%), Positives = 32/35 (91%)

Query:    62 FSRKCARLVREQRARFYIMRRCVTMLICWRDYNDS 96
             F+RKC RLV+EQRARFYIMRRCV MLICW D+N++
Sbjct:    40 FTRKCGRLVKEQRARFYIMRRCVVMLICWTDHNNN 74

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0048367 "shoot system development" evidence=ISS

TAIR|locus:504955897 RTFL2 "AT2G29125" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query:    61 SFSRKCARLVREQRARFYIMRRCVTMLICWRDYNDS 96
             S ++K + L +EQ+ARFYIMRRCV ML+CW  + DS
Sbjct:    80 SITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGDS 115

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0048367 "shoot system development" evidence=ISS

TAIR|locus:2024967 RTFL3 "AT1G07490" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
 Identities = 18/38 (47%), Positives = 28/38 (73%)

Query:    57 RRRCSFSRKCARLVREQRARFYIMRRCVTMLICWRDYN 94
             + + S ++K + L +EQ+ RFYIMRRCV ML+CW  ++
Sbjct:    69 KEKGSITQKYSSLAKEQKGRFYIMRRCVAMLVCWHKHD 106

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0048367 "shoot system development" evidence=ISS

TAIR|locus:1006230132 ROT4 "AT2G36985" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 19/34 (55%), Positives = 29/34 (85%)

Query:    61 SFSRKCARLVREQRARFYIMRRCVTMLICWRDYN 94
             +F +KC+ +V++QRA+FYI+RRC+ ML+CW D N
Sbjct:    14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWHDQN 47

GO:0003674 "molecular_function" evidence=ND

GO:0048367 "shoot system development" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0042127 "regulation of cell proliferation" evidence=IMP

TAIR|locus:4010713749 RTFL10 "AT3G14362" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 21/35 (60%), Positives = 26/35 (74%)

Query:    61 SFSRKCARLVREQRARFYIMRRCVTMLICWRDYND 95
             +F+ KC  LV+EQRAR YI+RRC TML CW  + D
Sbjct:    13 AFTSKCVSLVKEQRARLYILRRCATMLCCWYIHGD 47

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0048367 "shoot system development" evidence=ISS

TAIR|locus:4010713883 RTFL12 "AT4G13395" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 18/39 (46%), Positives = 28/39 (71%)

Query:    58 RRCSFSRKCARLVREQRARFYIMRRCVTMLICWRDYNDS 96
             R+  F  +C  + ++QR R YI+RRCV+ML+CW D++ S
Sbjct:    16 RKTRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSIS 54

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0048367 "shoot system development" evidence=ISS

TAIR|locus:1005716552 RTFL16 "AT3G25717" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query:    57 RRRCSFSRKCARLVREQRARFYIMRRCVTMLICWRD 92
             +RR S SR    ++REQRA+ YI++RCV ML+CW+D
Sbjct:     5 KRRVSSSRGLGGVLREQRAKLYIIKRCVVMLLCWQD 40

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0048367 "shoot system development" evidence=ISS

TAIR|locus:2148388 RTFL5 "AT5G59510" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query:    57 RRRCSFSRKCARLVREQRARFYIMRRCVTMLICWRDY 93
             ++  S +RKC  + +E ++RFYIM+RCV ML+CW  +
Sbjct:   104 QKGASVTRKCRNMAKEHKSRFYIMKRCVLMLVCWHKH 140

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0048367 "shoot system development" evidence=ISS

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:4010713928 RTFL6 "AT4G35783" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 17/34 (50%), Positives = 26/34 (76%)

Query:    63 SRKCARLVREQRARFYIMRRCVTMLICWRDYNDS 96
             ++ C  +V+E+R+RFYI RRC+ ML+CW  Y +S
Sbjct:    29 NKGCLAMVKERRSRFYIARRCILMLLCWHKYANS 62

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0048367 "shoot system development" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	96
pfam08137	19	pfam08137, DVL, DVL family	5e-07

>gnl|CDD|191945 pfam08137, DVL, DVL family

 Score = 41.8 bits (99), Expect = 5e-07
 Identities = 14/19 (73%), Positives = 17/19 (89%)

Query: 71 REQRARFYIMRRCVTMLIC 89
          +EQRAR YI+RRCV ML+C
Sbjct: 1  KEQRARLYIIRRCVVMLLC 19

This family consists of the DVL family of proteins. In a gain-of-function genetic screen for genes that influence fruit development in Arabidopsis, DEVIL (DVL) gene was identified. DVL is a small protein and overexpression of the protein results in pleiotropic phenotypes featured by shortened stature, rounder rosette leaves, clustered inflorescences, shortened pedicles, and siliques with pronged tips. DVL family is a novel class of small polypeptides and the overexpression phenotypes suggest that these polypeptides may have a role in plant development. Length = 19

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	96
PF08137	19	DVL: DVL family; InterPro: IPR012552 This family c	99.53

>PF08137 DVL: DVL family; InterPro: IPR012552 This family consists of the DVL family of proteins

Probab=99.53  E-value=7.4e-16  Score=81.90  Aligned_cols=19  Identities=74%  Similarity=1.471  Sum_probs=18.5

Q ss_pred             HhhhhhhHHHHHHHHHHHh
Q 046816           71 REQRARFYIMRRCVTMLIC   89 (96)
Q Consensus        71 KEQRaRlYIiRRCv~MLLC   89 (96)
                      ||||+|||||||||+||||
T Consensus         1 keqr~r~YIirrCv~mLlc   19 (19)
T PF08137_consen    1 KEQRARLYIIRRCVVMLLC   19 (19)
T ss_pred             CCcceEEEeHHHhHHHhcC
Confidence            7999999999999999998

In a gain-of-function genetic screen for genes that influence fruit development in Arabidopsis, DEVIL (DVL) gene was identified. DVL is a small protein and over expression of the protein results in pleiotropic phenotypes featured by shortened stature, rounder rosette leaves, clustered inflorescences, shortened pedicles, and siliques with pronged tips. DVL family is a novel class of small polypeptides and the over expression phenotypes suggest that these polypeptides may have a role in plant development [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00