Citrus Sinensis ID: 046944

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
MWPRLVANKFLRKRLGSNSFVADFPSNDEETLIRIPSLDKQQSLSHDNKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRNSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLLENDQAKNGKKLRSPAWCDRIIWCGRGLKQHLYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQSFFLSERFERITSHFEMSLNDCFLCSSR
ccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHccccccccEEEEEEEEEEEccccccccccccccccccccccccEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEcccEEEEEEEcccccccccccEEEEEEccccccccccccEEEEEEEccEEEEEEEcccccccccccHHHHHHHHHHHHHccccccccccccccccccccEEEEEccccccccccHHHHHHHHHcccHHHHHHcccccccccccccccccEEEEEccccEEEEEccccccccccccEEEEEEEEEEEEEccccccHHHHHHHHHHHHHHcccccccccccccc
cccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccccEEEEEEEEEEccccccccccccHHHHccccccccEEEEEEEEHcccccccEcccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccEHEEHHHHHEEEEEEEEEcHHHHHHHHccEEEEcccccccccccccEEEEEEEEcccEEEEEEHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccEEEcccHHHHHHHHHHccHHHHHHHccccccccccccccccHEEEcccccEEEEEcccEEEccccccEEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHcccccccHHHccccc
MWPRLVANKFLrkrlgsnsfvadfpsndeetliripsldkqqslshdnketqNYKVFAStwnvggvaptedidmedwlhtpntlcdiYVLGFQEIvplrasnvlgsennkIFTKWNSLIREALnkktpyqdnklrklqsispdndvqispgfrcIICKQMVGIFISVWirsdlrpyirhpsvscvgcgimgclgnkgsvsVRFQLYETSFCFVCshlasggkegdekyrnsdvaeilsrtsfprgpllnlprnildhdrVILLGDlnyrislpeATTRLLVERSEWNVLlendqakngkklrspawcdriiwcgrglkqhlyargesklsdhrpvkaIFSVEVRVLRTLKGIQSFFLSERFERITSHFemslndcflcssr
MWPRLVANKflrkrlgsnsfvadfpsndeETLIRIPSLDKQQSLSHDNKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLrasnvlgsennKIFTKWNSLIREALnkktpyqdnklrklqsispdndvqISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLasggkegdekyRNSDVAEilsrtsfprgpllNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNvllendqakngkklrspaWCDRIIWCGRGLKQHLYARgesklsdhrpvkaIFSVEVRVLRTLKGIQSFFLSERFERITShfemslndcflcssr
MWPRLVANKFLRKRLGSNSFVADFPSNDEETLIRIPSLDKQQSLSHDNKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRNSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLLENDQAKNGKKLRSPAWCDRIIWCGRGLKQHLYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQSFFLSERFERITSHFEMSLNDCFLCSSR
*********FL*****************************************NYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNSLIREALNK*******************DVQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLAS*************VAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLLENDQAKNGKKLRSPAWCDRIIWCGRGLKQHLYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQSFFLSERFERITSHFEMSLNDCFLC***
MWPRLVANKFLRKRLG************************************NYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLG*ENN***TKWNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRNSDVAEILSRTSF**********NILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLLENDQAK*G**L***AWCDRIIWCGRGLKQHLYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQ****************M**NDCFLCS**
MWPRLVANKFLRKRLGSNSFVADFPSNDEETLIRIPSLDKQQSLSHDNKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLAS**********NSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLLENDQAKNGKKLRSPAWCDRIIWCGRGLKQHLYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQSFFLSERFERITSHFEMSLNDCFLCSSR
MWPRLVANKFLRKRLGSNSFVADFPSNDEETLIRIPSLDKQQSLSHDNKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNSLIREALNK***********************SPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRNSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLLENDQAKNGKKLRSPAWCDRIIWCGRGLKQHLYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQSFFLSERFERITSHFEMSLNDCFLCSSR
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MWPRLVANKFLRKRLGSNSFVADFPSNDEETLIRIPSLDKQQSLSHDNKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRNSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLLENDQAKNGKKLRSPAWCDRIIWCGRGLKQHLYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQSFFLSERFERITSHFEMSLNDCFLCSSR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query381 2.2.26 [Sep-21-2011]
Q9LR47617 Type I inositol 1,4,5-tri no no 0.511 0.316 0.483 7e-56
Q84MA2590 Type I inositol 1,4,5-tri no no 0.543 0.350 0.445 6e-50
Q9FUR2646 Type I inositol 1,4,5-tri no no 0.527 0.311 0.414 2e-47
D3ZGS3 902 Inositol polyphosphate 5- no no 0.695 0.293 0.338 3e-38
Q6NVF0 900 Inositol polyphosphate 5- yes no 0.695 0.294 0.335 3e-38
Q01968 901 Inositol polyphosphate 5- yes no 0.829 0.350 0.323 2e-37
Q8K337 993 Type II inositol 1,4,5-tr no no 0.745 0.286 0.301 3e-37
P32019 993 Type II inositol 1,4,5-tr no no 0.745 0.286 0.298 5e-36
O18964 1324 Synaptojanin-1 (Fragment) no no 0.671 0.193 0.291 9e-33
O43001 1076 Inositol-1,4,5-trisphosph yes no 0.713 0.252 0.313 1e-32
>sp|Q9LR47|IP5P3_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 PE=1 SV=2 Back     alignment and function desciption
 Score =  218 bits (555), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/242 (48%), Positives = 145/242 (59%), Gaps = 47/242 (19%)

Query: 154 CIIC-KQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCF 212
           C++  KQMVG+F+++W++S+LR ++++  VSCVG G+MG LGNKGS+S+   L++TSFCF
Sbjct: 350 CLVASKQMVGVFLTIWVKSELREHVKNMKVSCVGRGLMGYLGNKGSISISMLLHQTSFCF 409

Query: 213 VCSHLASGGKEGDEKYRNSDVAEILSRTSFPR---GPLLNLPRNILDHDRVILLGDLNYR 269
           VC+HL SG KEGDE  RNSDV EIL +T FPR         P NIL HDRVI LGDLNYR
Sbjct: 410 VCTHLTSGQKEGDELKRNSDVMEILKKTRFPRVKSSEEEKSPENILQHDRVIWLGDLNYR 469

Query: 270 ISLPEATTRLLVERSEWNVLLENDQAK-------------NGK----------------- 299
           I+L   + + LVE   W  LLENDQ +              GK                 
Sbjct: 470 IALSYRSAKALVEMQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFPPTYKYSRNSDRYS 529

Query: 300 --------KLRSPAWCDRIIWCGRGLKQHLYARGESKLSDHRPVKAIFSVEV-----RVL 346
                   K R+PAWCDRI+W G GL Q  Y RGES+ SDHRPV  IF  EV     R+ 
Sbjct: 530 GDDLHPKEKRRTPAWCDRILWFGEGLHQLSYVRGESRFSDHRPVYGIFCAEVESAHNRIK 589

Query: 347 RT 348
           RT
Sbjct: 590 RT 591
Required for the patterning of procambium and during the differentiation of vascular tissues. Acts before the acquisition of preprocambial identity. Seems to be also involved in the abscisic acid (ABA) signaling pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 5EC: 6
>sp|Q84MA2|IP5P1_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase 1 OS=Arabidopsis thaliana GN=IP5P1 PE=1 SV=2 Back     alignment and function description
>sp|Q9FUR2|IP5P2_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase 2 OS=Arabidopsis thaliana GN=IP5P2 PE=1 SV=2 Back     alignment and function description
>sp|D3ZGS3|OCRL_RAT Inositol polyphosphate 5-phosphatase OCRL-1 OS=Rattus norvegicus GN=Ocrl PE=1 SV=1 Back     alignment and function description
>sp|Q6NVF0|OCRL_MOUSE Inositol polyphosphate 5-phosphatase OCRL-1 OS=Mus musculus GN=Ocrl PE=2 SV=1 Back     alignment and function description
>sp|Q01968|OCRL_HUMAN Inositol polyphosphate 5-phosphatase OCRL-1 OS=Homo sapiens GN=OCRL PE=1 SV=3 Back     alignment and function description
>sp|Q8K337|I5P2_MOUSE Type II inositol 1,4,5-trisphosphate 5-phosphatase OS=Mus musculus GN=Inpp5b PE=1 SV=1 Back     alignment and function description
>sp|P32019|I5P2_HUMAN Type II inositol 1,4,5-trisphosphate 5-phosphatase OS=Homo sapiens GN=INPP5B PE=1 SV=4 Back     alignment and function description
>sp|O18964|SYNJ1_BOVIN Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 PE=1 SV=2 Back     alignment and function description
>sp|O43001|SYJ1_SCHPO Inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=syj1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
255561811426 type I inositol polyphosphate 5-phosphat 0.926 0.828 0.663 1e-146
224101943429 predicted protein [Populus trichocarpa] 0.989 0.878 0.630 1e-142
225424470439 PREDICTED: type I inositol-1,4,5-trispho 0.997 0.865 0.595 1e-139
356528190436 PREDICTED: type I inositol-1,4,5-trispho 0.997 0.871 0.594 1e-138
356512277435 PREDICTED: type I inositol-1,4,5-trispho 0.994 0.871 0.604 1e-137
356577728426 PREDICTED: type I inositol-1,4,5-trispho 1.0 0.894 0.596 1e-136
15226375417 endonuclease/exonuclease/phosphatase dom 0.937 0.856 0.613 1e-135
357438945452 Type II inositol-1,4,5-trisphosphate 5-p 0.994 0.838 0.585 1e-133
297814428424 endonuclease/exonuclease/phosphatase fam 0.968 0.870 0.593 1e-132
356575042452 PREDICTED: type I inositol-1,4,5-trispho 0.989 0.834 0.564 1e-131
>gi|255561811|ref|XP_002521915.1| type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis] gi|223538953|gb|EEF40551.1| type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/410 (66%), Positives = 304/410 (74%), Gaps = 57/410 (13%)

Query: 1   MWPRLVANKFLRKRLGSNSFVADFPSND--EETLIRIPSLDKQQSLSHDN-------KET 51
           MWPRLVA+K LRKRLGSN+FVADFP N   E +L+ IP+   Q SLS D         +T
Sbjct: 21  MWPRLVASKILRKRLGSNNFVADFPHNGTTEGSLLDIPNFG-QPSLSADTIFDHRHKVDT 79

Query: 52  QNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKI 111
            NYK+F STWNVGG+AP+ED+DMEDWL TPN  CDIYVLGFQEIVPLRASNVLGSE ++I
Sbjct: 80  HNYKIFVSTWNVGGIAPSEDLDMEDWLDTPNN-CDIYVLGFQEIVPLRASNVLGSEKSRI 138

Query: 112 FTKWNSLIREALNKK-TPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIR 170
             KWNSLIR ALNKK   Y  N  ++++      +  I PGFRC+I KQMVGI ISVW+R
Sbjct: 139 SMKWNSLIRRALNKKINHYYSNGEKEIE------NSNILPGFRCVISKQMVGILISVWVR 192

Query: 171 SDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRN 230
           S LRPYIRHPSVSCVGCGIM CLGNKGSVSVRFQL+ETSFCF+CSHLASGG+EGDEK+RN
Sbjct: 193 SHLRPYIRHPSVSCVGCGIMSCLGNKGSVSVRFQLHETSFCFICSHLASGGREGDEKHRN 252

Query: 231 SDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLL 290
           SDVAEIL RTSFPRGP L+LPR ILDHDRVILLGDLNYRISLPEATTRLLV++ EWN LL
Sbjct: 253 SDVAEILLRTSFPRGPSLDLPRKILDHDRVILLGDLNYRISLPEATTRLLVDKKEWNSLL 312

Query: 291 ENDQ---------------------------------------AKNGKKLRSPAWCDRII 311
           ENDQ                                        K G+K R+PAWCDRI+
Sbjct: 313 ENDQLRMELLSGQTFEGWHEGTIKFAPTYKYCPNSNVYFGCVEGKKGEKWRAPAWCDRIV 372

Query: 312 WCGRGLKQHLYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQSFFLSERF 361
           W G GLKQHLY RGE+  SDHRPVKAIFS EV VL+TLKG+Q FFLSER 
Sbjct: 373 WYGEGLKQHLYTRGEANFSDHRPVKAIFSAEVEVLQTLKGLQQFFLSERL 422

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224101943|ref|XP_002312484.1| predicted protein [Populus trichocarpa] gi|222852304|gb|EEE89851.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424470|ref|XP_002281659.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 [Vitis vinifera] gi|297737580|emb|CBI26781.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356528190|ref|XP_003532688.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2-like [Glycine max] Back     alignment and taxonomy information
>gi|356512277|ref|XP_003524847.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2-like [Glycine max] Back     alignment and taxonomy information
>gi|356577728|ref|XP_003556975.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2-like [Glycine max] Back     alignment and taxonomy information
>gi|15226375|ref|NP_178299.1| endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] gi|4522008|gb|AAD21781.1| putative inositol polyphosphate-5-phosphatase [Arabidopsis thaliana] gi|330250420|gb|AEC05514.1| endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357438945|ref|XP_003589749.1| Type II inositol-1,4,5-trisphosphate 5-phosphatase [Medicago truncatula] gi|355478797|gb|AES60000.1| Type II inositol-1,4,5-trisphosphate 5-phosphatase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297814428|ref|XP_002875097.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320935|gb|EFH51356.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356575042|ref|XP_003555651.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
TAIR|locus:2059708417 AT2G01900 [Arabidopsis thalian 0.797 0.729 0.656 2.3e-131
TAIR|locus:2045502594 CVL1 "CVP2 like 1" [Arabidopsi 0.385 0.247 0.562 4e-81
TAIR|locus:2049826479 AT2G37440 [Arabidopsis thalian 0.629 0.501 0.515 8.2e-81
TAIR|locus:2201016617 CVP2 "COTYLEDON VASCULAR PATTE 0.385 0.238 0.556 2.2e-80
TAIR|locus:2077314547 AT3G63240 [Arabidopsis thalian 0.412 0.287 0.527 7.3e-80
TAIR|locus:2171805529 BST1 "BRISTLED 1" [Arabidopsis 0.375 0.270 0.568 4.4e-78
TAIR|locus:2175344466 AT5G04980 [Arabidopsis thalian 0.393 0.321 0.529 8.8e-74
TAIR|locus:2009061590 IP5PI "AT1G34120" [Arabidopsis 0.380 0.245 0.523 1.8e-71
TAIR|locus:2141095646 IP5PII "AT4G18010" [Arabidopsi 0.367 0.216 0.5 3.1e-71
TAIR|locus:2013031664 AT1G71710 "AT1G71710" [Arabido 0.417 0.239 0.453 9.3e-68
TAIR|locus:2059708 AT2G01900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1067 (380.7 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
 Identities = 210/320 (65%), Positives = 250/320 (78%)

Query:     1 MWPRLVANKFLRKRLGSNSFVADFPSNDEETLIRIPSL--DKQQSLSHDNKETQ--NYKV 56
             MWPRLVANK LRK LGSN+FVADFP N ++ LI    L  ++ +S+ H+  +T   NYKV
Sbjct:     1 MWPRLVANKILRKSLGSNNFVADFPPNTDQKLIEASGLADERSKSILHNQHKTTLLNYKV 60

Query:    57 FASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWN 116
             F STWNVGG+ P + +DMED L T  T CDIYVLGFQE+VPLRASNVLGS+NNK+ TKWN
Sbjct:    61 FVSTWNVGGIVPDDGLDMEDLLETHKTPCDIYVLGFQEVVPLRASNVLGSDNNKVSTKWN 120

Query:   117 SLIREALNKKT-PYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLRP 175
             SLIR+ALNK+  P++D  L + + I+      IS  FRCII KQMVGI I+VW+R DL P
Sbjct:   121 SLIRDALNKRARPHRDEDLSESKGING-----ISQDFRCIISKQMVGILITVWVRGDLWP 175

Query:   176 YIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRNSDVAE 235
             YIR+PSVSCVGCGIMGCLGNKGSVSVRFQL+ET+FCFVCSHLASGG++ DE+ RNSDV E
Sbjct:   176 YIRYPSVSCVGCGIMGCLGNKGSVSVRFQLHETTFCFVCSHLASGGRDRDERQRNSDVNE 235

Query:   236 ILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNVLLENDQA 295
             IL+R+SFPRG  L+LP+ ILDHDRVI LGDLNYRISLPE  TRLLVE  +WN+LLENDQ 
Sbjct:   236 ILARSSFPRGSSLDLPKKILDHDRVIFLGDLNYRISLPEEKTRLLVESKKWNILLENDQL 295

Query:   296 K----NGKKLRSPAWCDRII 311
             +    NG+  R   W + I+
Sbjct:   296 RMEIMNGQIFRG--WQEGIV 313
GO:0005634 "nucleus" evidence=ISM
GO:0016787 "hydrolase activity" evidence=ISS
GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2045502 CVL1 "CVP2 like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049826 AT2G37440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201016 CVP2 "COTYLEDON VASCULAR PATTERN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077314 AT3G63240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171805 BST1 "BRISTLED 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175344 AT5G04980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009061 IP5PI "AT1G34120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141095 IP5PII "AT4G18010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013031 AT1G71710 "AT1G71710" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00030647001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (439 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
cd09093292 cd09093, INPP5c_INPP5B, Catalytic inositol polypho 2e-70
PLN03191621 PLN03191, PLN03191, Type I inositol-1,4,5-trisphos 1e-65
cd09074299 cd09074, INPP5c, Catalytic domain of inositol poly 2e-61
cd09090291 cd09090, INPP5c_ScInp51p-like, Catalytic inositol 1e-60
cd09089328 cd09089, INPP5c_Synj, Catalytic inositol polyphosp 2e-60
smart00128306 smart00128, IPPc, Inositol polyphosphate phosphata 1e-55
cd09099336 cd09099, INPP5c_Synj2, Catalytic inositol polyphos 8e-42
cd09098336 cd09098, INPP5c_Synj1, Catalytic inositol polyphos 6e-39
COG5411460 COG5411, COG5411, Phosphatidylinositol 5-phosphate 2e-38
cd09094300 cd09094, INPP5c_INPP5J-like, Catalytic inositol po 5e-38
PLN03191 621 PLN03191, PLN03191, Type I inositol-1,4,5-trisphos 1e-20
cd09100307 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol p 6e-19
cd09091307 cd09091, INPP5c_SHIP, Catalytic inositol polyphosp 3e-18
cd09101304 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol p 6e-17
cd09095298 cd09095, INPP5c_INPP5E-like, Catalytic inositol po 5e-15
cd08372241 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase 6e-04
pfam03372143 pfam03372, Exo_endo_phos, Endonuclease/Exonuclease 0.001
>gnl|CDD|197327 cd09093, INPP5c_INPP5B, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins Back     alignment and domain information 
 Score =  222 bits (567), Expect = 2e-70
 Identities = 104/322 (32%), Positives = 155/322 (48%), Gaps = 66/322 (20%)

Query: 55  KVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTK 114
           ++F  TWNV G +P E +    WL       DIY +GFQE+  L A   L +++++   +
Sbjct: 2   RIFVGTWNVNGQSPDESLR--PWLSCDEEPPDIYAIGFQEL-DLSAEAFLFNDSSRE-QE 57

Query: 115 WNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLR 174
           W   +   L+      D K +K++ I                  ++VG+ + V+++ + R
Sbjct: 58  WVKAVERGLH-----PDAKYKKVKLI------------------RLVGMMLLVFVKKEHR 94

Query: 175 PYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRNSDVA 234
            +I+  +   VG GIMG +GNKG V+VRFQ + T+FCFV SHLA+     + + RN D  
Sbjct: 95  QHIKEVAAETVGTGIMGKMGNKGGVAVRFQFHNTTFCFVNSHLAA--HMEEVERRNQDYK 152

Query: 235 EILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRIS-LPEATTRLLVERSEWNVLLEND 293
           +I +R  F        P +I DHD V  LGDLNYRI  LP    + L+E+++   LL+ D
Sbjct: 153 DICARMKFEDPD--GPPLSISDHDVVFWLGDLNYRIQELPTEEVKELIEKNDLEELLKYD 210

Query: 294 QAKN---------------------------------GKKLRSPAWCDRIIWCGRGLKQH 320
           Q                                     +K R+PAWCDRI+W G  + Q 
Sbjct: 211 QLNIQRRAGKVFEGFTEGEINFIPTYKYDPGTDNWDSSEKCRAPAWCDRILWRGTNIVQL 270

Query: 321 LYARGES-KLSDHRPVKAIFSV 341
            Y      K SDH+PV A+F +
Sbjct: 271 SYRSHMELKTSDHKPVSALFDI 292

This subfamily contains the INPP5c domain of type II inositol polyphosphate 5-phosphatase I (INPP5B), Oculocerebrorenal syndrome of Lowe 1 (OCRL-1), and related proteins. It belongs to a family of Mg2+-dependent inositol polyphosphate 5-phosphatases, which hydrolyze the 5-phosphate from the inositol ring of various 5-position phosphorylated phosphoinositides (PIs) and inositol phosphates (IPs), and to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. INPP5B and OCRL1 preferentially hydrolyze the 5-phosphate of phosphatidylinositol (4,5)- bisphosphate [PI(4,5)P2] and phosphatidylinositol (3,4,5)- trisphosphate [PI(3,4,5)P3]. INPP5B can also hydrolyze soluble inositol (1,4,5)-trisphosphate [I(1,4,5)P3] and inositol (1,3,4,5)-tetrakisphosphate [I(1,3,4,5)P4]. INPP5B participates in the endocytic pathway and in the early secretory pathway. In the latter, it may function in retrograde ERGIC (ER-to-Golgi intermediate compartment)-to-ER transport; it binds specific RAB proteins within the secretory pathway. In the endocytic pathway, it binds RAB5 and during endocytosis, may function in a RAB5-controlled cascade for converting PI(3,4,5)P3 to phosphatidylinositol 3-phosphate (PI3P). This cascade may link growth factor signaling and membrane dynamics. Mutation in OCRL1 is implicated in Lowe syndrome, an X-linked recessive multisystem disorder, which includes defects in eye, brain, and kidney function, and in Type 2 Dent's disease, a disorder with only the renal symptoms. OCRL-1 may have a role in membrane trafficking within the endocytic pathway and at the trans-Golgi network, and may participate in actin dynamics or signaling from endomembranes. OCRL1 and INPP5B have overlapping functions: deletion of both 5-phosphatases in mice is embryonic lethal, deletion of OCRL1 alone has no phenotype, and deletion of Inpp5b alone has only a mild phenotype (male sterility). Several of the proteins that interact with OCRL1 also bind INPP5B, for examples, inositol polyphosphate phosphatase interacting protein of 27kDa (IPIP27)A and B (also known as Ses1 and 2), and endocytic signaling adaptor APPL1. OCRL1, but not INPP5B, binds clathrin heavy chain, the plasma membrane AP2 adaptor subunit alpha-adaptin. In addition to this INPP5c domain, most proteins in this subfamily have a C-terminal RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain. Length = 292
>gnl|CDD|215624 PLN03191, PLN03191, Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information
>gnl|CDD|197308 cd09074, INPP5c, Catalytic domain of inositol polyphosphate 5-phosphatases Back     alignment and domain information
>gnl|CDD|197324 cd09090, INPP5c_ScInp51p-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Saccharomyces cerevisiae Inp51p, Inp52p, and Inp53p, and related proteins Back     alignment and domain information
>gnl|CDD|197323 cd09089, INPP5c_Synj, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanins Back     alignment and domain information
>gnl|CDD|214525 smart00128, IPPc, Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>gnl|CDD|197333 cd09099, INPP5c_Synj2, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 2 Back     alignment and domain information
>gnl|CDD|197332 cd09098, INPP5c_Synj1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1 Back     alignment and domain information
>gnl|CDD|227698 COG5411, COG5411, Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|197328 cd09094, INPP5c_INPP5J-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins Back     alignment and domain information
>gnl|CDD|215624 PLN03191, PLN03191, Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information
>gnl|CDD|197334 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins Back     alignment and domain information
>gnl|CDD|197325 cd09091, INPP5c_SHIP, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and -2, and related proteins Back     alignment and domain information
>gnl|CDD|197335 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol 5-phosphatase-2 and related proteins Back     alignment and domain information
>gnl|CDD|197329 cd09095, INPP5c_INPP5E-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins Back     alignment and domain information
>gnl|CDD|197306 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily Back     alignment and domain information
>gnl|CDD|217520 pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 381
PLN03191621 Type I inositol-1,4,5-trisphosphate 5-phosphatase 100.0
KOG0566 1080 consensus Inositol-1,4,5-triphosphate 5-phosphatas 100.0
smart00128310 IPPc Inositol polyphosphate phosphatase, catalytic 100.0
COG5411460 Phosphatidylinositol 5-phosphate phosphatase [Sign 100.0
KOG0565145 consensus Inositol polyphosphate 5-phosphatase and 99.94
PTZ00312356 inositol-1,4,5-triphosphate 5-phosphatase; Provisi 99.86
KOG1976391 consensus Inositol polyphosphate 5-phosphatase, ty 99.53
PRK05421263 hypothetical protein; Provisional 99.48
TIGR03395283 sphingomy sphingomyelin phosphodiesterase. Members 99.34
COG3568259 ElsH Metal-dependent hydrolase [General function p 99.27
PRK11756268 exonuclease III; Provisional 99.26
KOG2756349 consensus Predicted Mg2+-dependent phosphodiestera 99.18
PF03372249 Exo_endo_phos: Endonuclease/Exonuclease/phosphatas 99.15
TIGR00633255 xth exodeoxyribonuclease III (xth). This family is 99.1
PTZ00297 1452 pantothenate kinase; Provisional 99.06
PRK13911250 exodeoxyribonuclease III; Provisional 99.02
PLN03144606 Carbon catabolite repressor protein 4 homolog; Pro 98.96
smart00476276 DNaseIc deoxyribonuclease I. Deoxyribonuclease I c 98.92
TIGR00195254 exoDNase_III exodeoxyribonuclease III. The model b 98.9
PRK15251271 cytolethal distending toxin subunit CdtB; Provisio 98.81
COG0708261 XthA Exonuclease III [DNA replication, recombinati 98.65
KOG3873422 consensus Sphingomyelinase family protein [Signal 98.62
COG3021309 Uncharacterized protein conserved in bacteria [Fun 97.73
KOG2338495 consensus Transcriptional effector CCR4-related pr 97.45
PF14529119 Exo_endo_phos_2: Endonuclease-reverse transcriptas 97.1
COG5239378 CCR4 mRNA deadenylase, exonuclease subunit and rel 93.76
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.7e-87  Score=687.39  Aligned_cols=354  Identities=42%  Similarity=0.766  Sum_probs=296.1

Q ss_pred             CChHHHHHHHhhhccCCCCccccCCCCcc-cc---cc-cCC----------------------ccccc--------cccc
Q 046944            1 MWPRLVANKFLRKRLGSNSFVADFPSNDE-ET---LI-RIP----------------------SLDKQ--------QSLS   45 (381)
Q Consensus         1 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~-~~~----------------------~~~~~--------~~~~   45 (381)
                      +|||+||||||||+++++||+||+.+.+. .+   .+ +..                      ....+        ++.+
T Consensus        12 ~w~~~v~rkwlni~~k~~df~ad~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r   91 (621)
T PLN03191         12 FWPSIVMKKWLNIKPKVYDFSEDEYDTETESEDDACSVKDVRVNVDEDHANRRQGNQSVFGNQISDGGVSVSKGYSSKHR   91 (621)
T ss_pred             ccHHHHHHHHhCcCCcccccCcccccCCCccccchhhhhcccccccccccccccccccccccccccCccccccccchhhh
Confidence            69999999999999999999999764311 10   00 000                      00011        1222


Q ss_pred             --------CCCCCccceEEEEEEeeCCCCCCCCCCccccccCCCCCCCcEEEEEEEeeecCcccccccCCCchhhHHHHH
Q 046944           46 --------HDNKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNS  117 (381)
Q Consensus        46 --------~~~~~~~~l~V~V~TWNv~g~~p~~~~dL~~wl~~~~~~~DIyViG~QEiv~l~a~~v~~~~~~~~~~~W~~  117 (381)
                              ..|++.++++|||+||||||+.|+.+++|.+||..+ .++|||||||||+|||+|+||++++++.+.++|+.
T Consensus        92 r~~~e~~ra~y~~~~~~rv~v~TWNV~g~~p~~~l~l~~wl~~~-~p~DiyviG~QE~v~lna~nv~~~~~~~~~~~W~~  170 (621)
T PLN03191         92 RGKSETLRAQYINTKDIRVTIGTWNVAGRLPSEDLEIEDWLSTE-EPADIYIIGFQEVVPLNAGNVLGAEDSRPIPKWEA  170 (621)
T ss_pred             ccchhhhHHHhccccceEEEEEEeecCCCCCcccCCHHHhccCC-CCCCEEEEeeEEeccCcHhhhhccccCCchhhHHH
Confidence                    235788999999999999999999999999999865 78899999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCcch------hhhhc------------------------------------------------------
Q 046944          118 LIREALNKKTPYQDN------KLRKL------------------------------------------------------  137 (381)
Q Consensus       118 ~i~~~L~~~~~~~~~------~~~~~------------------------------------------------------  137 (381)
                      +|+++||+..+....      ..+|+                                                      
T Consensus       171 ~i~~tl~~~~~~~~~~k~~S~ppsp~~~~~~~~~e~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (621)
T PLN03191        171 IIRRTLNKSNKPESKHKSYSAPPSPVLRTSIVADELAEEVDSLPLEMMNNEFIDAATGCPSLEPERNKNIGWPEHSLDAT  250 (621)
T ss_pred             HHHHHHhccCCCCCccccCCCCCCcccCCcchhhhhhhhcccChhhhcccccccccccccccchhhccccCCcccccccC
Confidence            999999987653200      00000                                                      


Q ss_pred             ----------------ccCC----CC-------------------------C----------------------------
Q 046944          138 ----------------QSIS----PD-------------------------N----------------------------  144 (381)
Q Consensus       138 ----------------~~~~----~~-------------------------~----------------------------  144 (381)
                                      ++.+    ++                         +                            
T Consensus       251 ~~~~~~~~~l~r~~s~~~r~~~~~~e~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (621)
T PLN03191        251 PQVVSSNSKLRRVFSSSARLGFKWPENPSLFSPQRFALNARGLKRSHRSFGNLGLSWNEIKQRSEVPEVPEVIDSLSDVS  330 (621)
T ss_pred             cccccccccceeeeccccccccCCCCCccccCchhhcccccccchhhhccccccccccchhhcccccccccccccccccc
Confidence                            0000    00                         0                            


Q ss_pred             --------C------------------CCCCCCeEEEEEeeeecEEEEEEEecCCCCccccceeeeeecccccCCCCcce
Q 046944          145 --------D------------------VQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGS  198 (381)
Q Consensus       145 --------~------------------~~~~~~Y~~v~s~~mvGi~L~Vfvr~~l~~~I~~v~~s~v~~G~~g~~GNKG~  198 (381)
                              .                  ......|++|.|+||+||+|+||+|++++++|++|++++|+||+||++|||||
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YvkV~S~qLvGl~L~VFvk~~l~~~Is~V~~s~V~tGl~G~~GNKGA  410 (621)
T PLN03191        331 DRSSEAEDDTFKEVPSYQLPEDLIKDCRKVKQKYVRIVSKQMVGIYVSVWVRKRLRRHINNLKVSPVGVGLMGYMGNKGS  410 (621)
T ss_pred             cccCCCcccccccCChhhhhhHHHHhhccCCCCEEEEEEEeeeeEEEEEEEehhhhhhcccceeeeEeecccccccccee
Confidence                    0                  00123699999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEeCeEEEEEeeccCCCCCCCChhHHHHHHHHHHhhCCCCCCCCCCCCccccccccEEEeCccccccCCChHHHH
Q 046944          199 VSVRFQLYETSFCFVCSHLASGGKEGDEKYRNSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTR  278 (381)
Q Consensus       199 V~i~~~l~~t~i~Fvn~HL~a~~~~~~~~~Rn~d~~~I~~~~~f~~~~~~~~p~~i~~~d~vf~~GDlNyRi~~~~~~v~  278 (381)
                      |+|+|.+++++||||||||+||++++++++||+|+.+|++++.|........|..|.+||+|||||||||||++++++++
T Consensus       411 VaIr~~l~~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRIdl~~~ev~  490 (621)
T PLN03191        411 VSISMSLFQSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRLNMLDTEVR  490 (621)
T ss_pred             EEEEEEEcCcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCccccccCCHHHHH
Confidence            99999999999999999999999877788999999999999999764434567889999999999999999999999999


Q ss_pred             HHHhhhcHHHHhccccc------------------------------c--------cCCCCCCCcccCeeeeecCcceee
Q 046944          279 LLVERSEWNVLLENDQA------------------------------K--------NGKKLRSPAWCDRIIWCGRGLKQH  320 (381)
Q Consensus       279 ~li~~~~~~~Ll~~DQL------------------------------d--------t~~k~R~PSWcDRIL~~~~~~~~~  320 (381)
                      ++|.+++|..||++|||                              +        |++|+|+|||||||||++++++++
T Consensus       491 ~lI~~~~~~~LL~~DQL~~e~~~g~vF~GF~Eg~I~FpPTYKYd~gSd~Ydg~~~~Ts~KkR~PSWCDRILykg~~i~~l  570 (621)
T PLN03191        491 KLVAQKRWDELINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIKQL  570 (621)
T ss_pred             HHHhhccHHHHHHHhHHHHHHHcCCccCCcccCCccCCCCcccccCCccccccccccccCccccchhheEeecCCCceEe
Confidence            99999999999999999                              1        356899999999999999999999


Q ss_pred             eeccCCCCcCCCcCeeeeEEEEEEeccchhhhhhhh
Q 046944          321 LYARGESKLSDHRPVKAIFSVEVRVLRTLKGIQSFF  356 (381)
Q Consensus       321 ~Y~~~~~~~SDHrPV~a~f~v~v~~~~~~~~~~~~~  356 (381)
                      .|.+.++.+||||||+|.|.++|+++++. ++|+.+
T Consensus       571 ~Y~s~ei~~SDHRPV~A~F~v~V~~id~~-k~q~~~  605 (621)
T PLN03191        571 CYKRSEIRLSDHRPVSSMFLVEVEVFDHR-KLQRAL  605 (621)
T ss_pred             EeccCCcccCCchhcceEEEEEEEecCHH-HHHhhh
Confidence            99999999999999999999999999985 466554

>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional Back     alignment and domain information
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism] Back     alignment and domain information
>PRK05421 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03395 sphingomy sphingomyelin phosphodiesterase Back     alignment and domain information
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>PRK11756 exonuclease III; Provisional Back     alignment and domain information
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms] Back     alignment and domain information
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling [] Back     alignment and domain information
>TIGR00633 xth exodeoxyribonuclease III (xth) Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>PRK13911 exodeoxyribonuclease III; Provisional Back     alignment and domain information
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional Back     alignment and domain information
>smart00476 DNaseIc deoxyribonuclease I Back     alignment and domain information
>TIGR00195 exoDNase_III exodeoxyribonuclease III Back     alignment and domain information
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional Back     alignment and domain information
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms] Back     alignment and domain information
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription] Back     alignment and domain information
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B Back     alignment and domain information
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
3mtc_A313 Crystal Structure Of Inpp5b In Complex With Phospha 9e-37
3n9v_A313 Crystal Structure Of Inpp5b Length = 313 9e-37
1i9y_A347 Crystal Structure Of Inositol Polyphosphate 5-Phosp 1e-33
3nr8_B316 Crystal Structure Of Human Ship2 Length = 316 6e-15
2xsw_A357 Crystal Structure Of Human Inpp5e Length = 357 3e-09
>pdb|3MTC|A Chain A, Crystal Structure Of Inpp5b In Complex With Phosphatidylinositol 4- Phosphate Length = 313 Back     alignment and structure 
Iteration: 1

 Score =  150 bits (380), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 152/330 (46%), Gaps = 64/330 (19%)
Query: 52  QNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKI 111
           QN++ FA T+NV G +P E + +  WL       D+Y +GFQE+   + +        + 
Sbjct: 6   QNFRFFAGTYNVNGQSPKECLRL--WLSNGIQAPDVYCVGFQELDLSKEAFFFHDTPKE- 62
Query: 112 FTKWNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRS 171
             +W   + E L+    Y   KL +L                       VGI + ++++ 
Sbjct: 63  -EEWFKAVSEGLHPDAKYAKVKLIRL-----------------------VGIMLLLYVKQ 98
Query: 172 DLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYRNS 231
           +   YI       VG GIMG +GNKG V++RFQ + TS C V SHLA+  +E +   RN 
Sbjct: 99  EHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYER--RNQ 156
Query: 232 DVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRI-SLPEATTRLLVERSEWNVLL 290
           D  +I SR  F +      P  I +HD ++ LGDLNYRI  L     + L+E  ++ +L 
Sbjct: 157 DYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLY 216
Query: 291 ENDQAK---------------------------------NGKKLRSPAWCDRIIWCGRGL 317
             DQ K                                   +K R+PAWCDRI+W G+ +
Sbjct: 217 AYDQLKIQVAAKTVFEGFTEGELTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILWKGKNI 276
Query: 318 KQHLYARGES-KLSDHRPVKAIFSVEVRVL 346
            Q  Y    + K SDH+PV ++F + VRV+
Sbjct: 277 TQLSYQSHMALKTSDHKPVSSVFDIGVRVV 306
>pdb|3N9V|A Chain A, Crystal Structure Of Inpp5b Length = 313 Back     alignment and structure
>pdb|1I9Y|A Chain A, Crystal Structure Of Inositol Polyphosphate 5-Phosphatase Domain (Ipp5c) Of Spsynaptojanin Length = 347 Back     alignment and structure
>pdb|3NR8|B Chain B, Crystal Structure Of Human Ship2 Length = 316 Back     alignment and structure
>pdb|2XSW|A Chain A, Crystal Structure Of Human Inpp5e Length = 357 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
3mtc_A313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 1e-100
1i9z_A347 Synaptojanin, phosphatidylinositol phosphate phosp 5e-92
4a9c_A316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 3e-86
2xsw_A357 72 kDa inositol polyphosphate 5-phosphatase; inosi 5e-83
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 4e-75
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
1zwx_A301 SMCL, sphingomyelinase-C; dnase1-like fold, beta-h 7e-05
2ddr_A306 Sphingomyelin phosphodiesterase; DNAse I like fold 1e-04
3i41_A317 Beta-hemolysin; beta toxin, sphingomyelinase, toxi 2e-04
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Length = 313 Back     alignment and structure
 Score =  299 bits (767), Expect = e-100
 Identities = 101/331 (30%), Positives = 149/331 (45%), Gaps = 64/331 (19%)

Query: 50  ETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENN 109
             QN++ FA T+NV G +P E +    WL       D+Y +GFQE+  L        +  
Sbjct: 4   YIQNFRFFAGTYNVNGQSPKECLR--LWLSNGIQAPDVYCVGFQEL-DLSKEAFFFHDTP 60

Query: 110 KIFTKWNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWI 169
           K   +W   + E L+    Y                         +   ++VGI + +++
Sbjct: 61  KE-EEWFKAVSEGLHPDAKYA-----------------------KVKLIRLVGIMLLLYV 96

Query: 170 RSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKYR 229
           + +   YI       VG GIMG +GNKG V++RFQ + TS C V SHLA+  +E +   R
Sbjct: 97  KQEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTSICVVNSHLAAHIEEYER--R 154

Query: 230 NSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRIS-LPEATTRLLVERSEWNV 288
           N D  +I SR  F +      P  I +HD ++ LGDLNYRI  L     + L+E  ++ +
Sbjct: 155 NQDYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQM 214

Query: 289 LLENDQAKN---------------------------------GKKLRSPAWCDRIIWCGR 315
           L   DQ K                                   +K R+PAWCDRI+W G+
Sbjct: 215 LYAYDQLKIQVAAKTVFEGFTEGELTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILWKGK 274

Query: 316 GLKQHLYARGES-KLSDHRPVKAIFSVEVRV 345
            + Q  Y    + K SDH+PV ++F + VRV
Sbjct: 275 NITQLSYQSHMALKTSDHKPVSSVFDIGVRV 305
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Length = 347 Back     alignment and structure
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Length = 316 Back     alignment and structure
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Length = 357 Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Length = 282 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3 Length = 301 Back     alignment and structure
>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Length = 306 Back     alignment and structure
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Length = 317 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
3mtc_A313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 100.0
4a9c_A316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 100.0
1i9z_A347 Synaptojanin, phosphatidylinositol phosphate phosp 100.0
2xsw_A357 72 kDa inositol polyphosphate 5-phosphatase; inosi 100.0
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 100.0
4gz1_A256 Tyrosyl-DNA phosphodiesterase 2; protein-DNA compl 99.71
4fva_A256 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy 99.69
3teb_A266 Endonuclease/exonuclease/phosphatase; PSI-biology, 99.68
4gew_A362 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy 99.66
4f1h_A250 Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA com 99.64
3l1w_A257 Uncharacterized protein; APC29019.2, conserved pro 99.59
3g6s_A267 Putative endonuclease/exonuclease/phosphatase fami 99.58
3mpr_A298 Putative endonuclease/exonuclease/phosphatase FAM 99.53
1ako_A268 Exonuclease III; AP-endonuclease, DNA repair; 1.70 99.46
1zwx_A301 SMCL, sphingomyelinase-C; dnase1-like fold, beta-h 99.41
3i41_A317 Beta-hemolysin; beta toxin, sphingomyelinase, toxi 99.39
2ddr_A306 Sphingomyelin phosphodiesterase; DNAse I like fold 99.37
2jc4_A256 Exodeoxyribonuclease III; hydrolase, repair phosph 99.35
1vyb_A238 ORF2 contains A reverse transcriptase domain; endo 99.29
2jc5_A259 Exodeoxyribonuclease; hydrolase, repair phosphodie 99.23
2voa_A257 AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP 99.21
2o3h_A285 DNA-(apurinic or apyrimidinic site) lyase; APE, en 99.17
1hd7_A318 DNA-(apurinic or apyrimidinic site) lyase; DNA rep 99.16
1wdu_A245 TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA 99.16
2a40_B260 Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse 99.1
2j63_A467 AP-endonuclease; base excision repair, lyase; 2.48 99.09
1sr4_B261 CDT B, cytolethal distending toxin protein B; bact 99.02
3g91_A265 MTH0212, exodeoxyribonuclease; double-strand speci 99.02
3ngq_A398 CCR4-NOT transcription complex subunit 6-like; alp 98.91
2ei9_A240 Non-LTR retrotransposon R1BMKS ORF2 protein; four 98.88
2f1n_A262 CDT B, cytolethal distending toxin subunit B; E.co 98.82
4b8c_D727 Glucose-repressible alcohol dehydrogenase transcr 98.63
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Back     alignment and structure
Probab=100.00  E-value=1.5e-75  Score=570.83  Aligned_cols=272  Identities=36%  Similarity=0.633  Sum_probs=245.3

Q ss_pred             CCCccceEEEEEEeeCCCCCCCCCCccccccCCCCCCCcEEEEEEEeeecCcccccccCCCchhhHHHHHHHHHHHhccC
Q 046944           48 NKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNSLIREALNKKT  127 (381)
Q Consensus        48 ~~~~~~l~V~V~TWNv~g~~p~~~~dL~~wl~~~~~~~DIyViG~QEiv~l~a~~v~~~~~~~~~~~W~~~i~~~L~~~~  127 (381)
                      |+..++++|+|+||||||..|+.  +|.+||.+...+||||||||||+ ++++.+++.. +.....+|++.|+++|+.. 
T Consensus         2 yt~~~~~~i~v~TwNvng~~~~~--~l~~wL~~~~~~pDI~viGlQE~-~l~~~~~~~~-~~~~~~~W~~~i~~~L~~~-   76 (313)
T 3mtc_A            2 YTYIQNFRFFAGTYNVNGQSPKE--CLRLWLSNGIQAPDVYCVGFQEL-DLSKEAFFFH-DTPKEEEWFKAVSEGLHPD-   76 (313)
T ss_dssp             CEEEEEEEEEEEEEECTTCCCCS--CTHHHHSSSCCCCSEEEEEEECS-CCSHHHHTTC-CCHHHHHHHHHHHHHSCTT-
T ss_pred             CceeeccEEEEEEEEcCCccCch--hHHHHhcccCCCCCeEEEEEEec-ccchhhhccc-CcchHHHHHHHHHHhcCCC-
Confidence            57789999999999999999865  48899987667899999999999 7777776543 3456789999999999742 


Q ss_pred             CCcchhhhhcccCCCCCCCCCCCCeEEEEEeeeecEEEEEEEecCCCCccccceeeeeecccccCCCCcceEEEEEEEeC
Q 046944          128 PYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYE  207 (381)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~v~s~~mvGi~L~Vfvr~~l~~~I~~v~~s~v~~G~~g~~GNKG~V~i~~~l~~  207 (381)
                                            ..|.+|.+++|+||+|+||+|+++.++|++|++++|+||+||++||||||+|+|.+++
T Consensus        77 ----------------------~~Y~~v~s~~lvGl~l~Vfvr~~~~~~i~~v~~~~v~tG~~g~~GNKGaV~ir~~~~~  134 (313)
T 3mtc_A           77 ----------------------AKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHN  134 (313)
T ss_dssp             ----------------------SCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECSGGGTSTTSEEEEEEEEETT
T ss_pred             ----------------------CCEEEEEEechhhhhhhhhhhhhhhhhcceeEeeeecccccccccCCceEEEEEEECC
Confidence                                  2799999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEeeccCCCCCCCChhHHHHHHHHHHhhCCCCCCCCCCCCccccccccEEEeCccccccC-CChHHHHHHHhhhcH
Q 046944          208 TSFCFVCSHLASGGKEGDEKYRNSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRIS-LPEATTRLLVERSEW  286 (381)
Q Consensus       208 t~i~Fvn~HL~a~~~~~~~~~Rn~d~~~I~~~~~f~~~~~~~~p~~i~~~d~vf~~GDlNyRi~-~~~~~v~~li~~~~~  286 (381)
                      ++||||||||+||++  +.++||+|+.+|++++.|+.......|..|.+||+|||+|||||||+ ++.+++.++|++++|
T Consensus       135 ts~cFVnsHLaA~~~--~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~i~~~d~vfw~GDLNyRi~~~~~~~v~~~i~~~~~  212 (313)
T 3mtc_A          135 TSICVVNSHLAAHIE--EYERRNQDYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDF  212 (313)
T ss_dssp             EEEEEEEEECCCSGG--GHHHHHHHHHHHHHHCCBCCSCSSSCCBCTTSSSEEEEEEECCCCBCSSCHHHHHHHHHTTCH
T ss_pred             cEEEEEeeccCCCch--HHHHHHHHHHHHHHhcccCCCCCccCCccccCCceEEEeccccccccCCCHHHHHHHHhcCCH
Confidence            999999999999986  68899999999999999976433334667899999999999999997 888999999999999


Q ss_pred             HHHhccccc---------------------------------ccCCCCCCCcccCeeeeecCcceeeeeccC-CCCcCCC
Q 046944          287 NVLLENDQA---------------------------------KNGKKLRSPAWCDRIIWCGRGLKQHLYARG-ESKLSDH  332 (381)
Q Consensus       287 ~~Ll~~DQL---------------------------------dt~~k~R~PSWcDRIL~~~~~~~~~~Y~~~-~~~~SDH  332 (381)
                      +.|+++|||                                 |+++|+|+|||||||||++.+++++.|.+. ++.+|||
T Consensus       213 ~~Ll~~DQL~~~~~~g~~f~gf~E~~I~F~PTYKyd~~s~~ydts~k~R~PsWcDRIL~~~~~i~~~~Y~s~~~~~~SDH  292 (313)
T 3mtc_A          213 QMLYAYDQLKIQVAAKTVFEGFTEGELTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILWKGKNITQLSYQSHMALKTSDH  292 (313)
T ss_dssp             HHHHTTBHHHHHHHTTSSCTTCBCCCCCSCCCBCBCTTSSSBCCSTTCCCCBCCEEEEEEESSEEEEEEEECTTCCSSSS
T ss_pred             HHHHHhHHHHHHHHcCCccCCcccCCcCcCCCccCcCCCcccccccCEecccccceEEEecCCeEEEeeeeccCccCCCc
Confidence            999999999                                 456899999999999999999999999985 7999999


Q ss_pred             cCeeeeEEEEEEeccc
Q 046944          333 RPVKAIFSVEVRVLRT  348 (381)
Q Consensus       333 rPV~a~f~v~v~~~~~  348 (381)
                      |||+|.|.+.+.++..
T Consensus       293 rPV~a~f~~~~~~~~~  308 (313)
T 3mtc_A          293 KPVSSVFDIGVRVVAH  308 (313)
T ss_dssp             CCEEEEEEEEEEEECC
T ss_pred             cCeEEEEEEEEEEeec
Confidence            9999999999998753
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Back     alignment and structure
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Back     alignment and structure
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Back     alignment and structure
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A* Back     alignment and structure
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans} Back     alignment and structure
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b} Back     alignment and structure
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A Back     alignment and structure
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B* Back     alignment and structure
>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis} Back     alignment and structure
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1ako_A Exonuclease III; AP-endonuclease, DNA repair; 1.70A {Escherichia coli} SCOP: d.151.1.1 Back     alignment and structure
>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3 Back     alignment and structure
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Back     alignment and structure
>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Back     alignment and structure
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis} Back     alignment and structure
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A Back     alignment and structure
>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis} Back     alignment and structure
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus} Back     alignment and structure
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A Back     alignment and structure
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A Back     alignment and structure
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1 Back     alignment and structure
>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D* Back     alignment and structure
>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major} Back     alignment and structure
>1sr4_B CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: d.151.1.1 PDB: 2f2f_B Back     alignment and structure
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A Back     alignment and structure
>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A Back     alignment and structure
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori} Back     alignment and structure
>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1 Back     alignment and structure
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 381
d1i9za_345 d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission 2e-72
d2imqx1280 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug ( 4e-38
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 345 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  227 bits (580), Expect = 2e-72
 Identities = 95/330 (28%), Positives = 143/330 (43%), Gaps = 65/330 (19%)

Query: 50  ETQNYKVFASTWNVGGVAPTEDIDMEDWLHTPNT-LCDIYVLGFQEIVPLRASNVLGSEN 108
           E +N K+F +++N+ G + T  ++  +WL   NT L DIYV+GFQEIV L    V+ + +
Sbjct: 21  EHKNVKIFVASYNLNGCSATTKLE--NWLFPENTPLADIYVVGFQEIVQLTPQQVISA-D 77

Query: 109 NKIFTKWNSLIREALNKKTPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVW 168
                +W S ++  LN K                       PG+  +   Q+VG  + ++
Sbjct: 78  PAKRREWESCVKRLLNGKCTSG-------------------PGYVQLRSGQLVGTALMIF 118

Query: 169 IRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLYETSFCFVCSHLASGGKEGDEKY 228
            +    P I++   +    G+ G  GNKG+V++RF   +T  CF+ SHLA+G    +   
Sbjct: 119 CKESCLPSIKNVEGTVKKTGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAG--YTNYDE 176

Query: 229 RNSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEWNV 288
           R+ D   I S   F RG      R+I +HD V+  GD NYRISL        + + + + 
Sbjct: 177 RDHDYRTIASGLRFRRG------RSIFNHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSY 230

Query: 289 LLENDQAK---------------------------------NGKKLRSPAWCDRIIWCGR 315
           L E DQ                                      K R PAW DRI++ G 
Sbjct: 231 LFEYDQLNKQMLTGKVFPFFSELPITFPPTYKFDIGTDIYDTSDKHRVPAWTDRILYRGE 290

Query: 316 GLKQHLYARGESKLSDHRPVKAIFSVEVRV 345
            L  H Y       SDHRP+ A +   +  
Sbjct: 291 -LVPHSYQSVPLYYSDHRPIYATYEANIVK 319
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Length = 280 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
d1i9za_345 Synaptojanin, IPP5C domain {Fission yeast (Schizos 100.0
d2imqx1280 Salivary nitrophorin {Bedbug (Cimex lectularius) [ 100.0
d2ddra1299 Sphingomyelin phosphodiesterase C {Bacillus cereus 99.57
d1zwxa1293 Sphingomyelin phosphodiesterase C {Listeria ivanov 99.56
d1wdua_228 Endonuclease domain of TRAS1 retrotransposon (ORF2 99.26
d1vyba_236 Endonuclease domain of LINE-1 reverse transcriptas 99.24
d2f1na1250 Cytolethal distending toxin subunit B {Escherichia 99.04
d1sr4b_261 Cytolethal distending toxin subunit B {Haemophilus 98.94
d2a40b1260 Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913 98.92
d1hd7a_275 DNA repair endonuclease Hap1 {Human (Homo sapiens) 98.61
d1akoa_268 DNA-repair enzyme exonuclease III {Escherichia col 98.3
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.5e-66  Score=509.26  Aligned_cols=277  Identities=34%  Similarity=0.596  Sum_probs=240.1

Q ss_pred             CCCccceEEEEEEeeCCCCCCCCCCccccccCCC-CCCCcEEEEEEEeeecCcccccccCCCchhhHHHHHHHHHHHhcc
Q 046944           48 NKETQNYKVFASTWNVGGVAPTEDIDMEDWLHTP-NTLCDIYVLGFQEIVPLRASNVLGSENNKIFTKWNSLIREALNKK  126 (381)
Q Consensus        48 ~~~~~~l~V~V~TWNv~g~~p~~~~dL~~wl~~~-~~~~DIyViG~QEiv~l~a~~v~~~~~~~~~~~W~~~i~~~L~~~  126 (381)
                      ++..++++|+|+||||||..|+.  +|.+||... ..+||||||||||+++++++++++ .++....+|+..++++|+..
T Consensus        19 ~~~~~~l~I~v~TWNv~~~~~~~--~l~~~l~~~~~~~~DI~viglQEi~~~~~~~~~~-~~~~~~~~w~~~~~~~~~~~   95 (345)
T d1i9za_          19 FSEHKNVKIFVASYNLNGCSATT--KLENWLFPENTPLADIYVVGFQEIVQLTPQQVIS-ADPAKRREWESCVKRLLNGK   95 (345)
T ss_dssp             TEEEEEEEEEEEEEECTTCCCCS--CCHHHHSCSSSCCCSEEEEEEECSSCCC-----C-CCHHHHHHHHHHHHHHHHHT
T ss_pred             hcCCCceEEEEEEEcCCCccCCc--chHHhhccCCCCCCCEEEEEcccCCccchhhhcc-cCchhhHHHHHHHHHhcccc
Confidence            57889999999999999999976  478999763 356999999999999999999876 46678899999999999864


Q ss_pred             CCCcchhhhhcccCCCCCCCCCCCCeEEEEEeeeecEEEEEEEecCCCCccccceeeeeecccccCCCCcceEEEEEEEe
Q 046944          127 TPYQDNKLRKLQSISPDNDVQISPGFRCIICKQMVGIFISVWIRSDLRPYIRHPSVSCVGCGIMGCLGNKGSVSVRFQLY  206 (381)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~v~s~~mvGi~L~Vfvr~~l~~~I~~v~~s~v~~G~~g~~GNKG~V~i~~~l~  206 (381)
                      ..                   ...+|.++.+.+|+|++|+||+|+++.++|+++.++++++|++|++||||||+++|.++
T Consensus        96 ~~-------------------~~~~Y~~v~~~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~g~~g~~gnKGaV~vr~~i~  156 (345)
T d1i9za_          96 CT-------------------SGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVSGNKGAVAIRFDYE  156 (345)
T ss_dssp             CC-------------------SSCCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECCCC----CCEEEEEEEEET
T ss_pred             cc-------------------CCCCeEEEEEecccCcEEEEEEcchhccccccceeEEEecCcCCcccCCceEEEEEEEC
Confidence            32                   13489999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEEeeccCCCCCCCChhHHHHHHHHHHhhCCCCCCCCCCCCccccccccEEEeCccccccCCChHHHHHHHhhhcH
Q 046944          207 ETSFCFVCSHLASGGKEGDEKYRNSDVAEILSRTSFPRGPLLNLPRNILDHDRVILLGDLNYRISLPEATTRLLVERSEW  286 (381)
Q Consensus       207 ~t~i~Fvn~HL~a~~~~~~~~~Rn~d~~~I~~~~~f~~~~~~~~p~~i~~~d~vf~~GDlNyRi~~~~~~v~~li~~~~~  286 (381)
                      +++||||||||+||+.  +..+|++++..|++++.|..      ++.+.++|++||+||||||++++...+.+++..++|
T Consensus       157 ~t~l~fvn~HL~ag~~--~~~~R~~~~~~i~~~l~~~~------~~~~~~~d~v~~~GDlN~R~~~~~~~~~~~i~~~~~  228 (345)
T d1i9za_         157 DTGLCFITSHLAAGYT--NYDERDHDYRTIASGLRFRR------GRSIFNHDYVVWFGDFNYRISLTYEEVVPCIAQGKL  228 (345)
T ss_dssp             TEEEEEEEEECCCCSS--CHHHHHHHHHHHHHHCCCGG------GCCTTSSSEEEEEEECCCCBSSCHHHHHHHHHTTCH
T ss_pred             CEEEEEEEecccCccc--chHHHHHHHHHHHHhhcccc------ccccccCceeEEeccccccccCchhhhHhhhhccch
Confidence            9999999999999986  67889999999999988754      345778999999999999999999999999999999


Q ss_pred             HHHhccccc---------------------------------ccCCCCCCCcccCeeeeecCcceeeeeccCCCCcCCCc
Q 046944          287 NVLLENDQA---------------------------------KNGKKLRSPAWCDRIIWCGRGLKQHLYARGESKLSDHR  333 (381)
Q Consensus       287 ~~Ll~~DQL---------------------------------dt~~k~R~PSWcDRIL~~~~~~~~~~Y~~~~~~~SDHr  333 (381)
                      ..|+++|||                                 +++.++|+|||||||||++ .+.++.|.+.++.+|||+
T Consensus       229 ~~l~~~dql~~~~~~~~~~~~~~E~~I~F~PTyk~~~~~~~yd~~~k~RiPsWcDRIL~~~-~~~~~~Y~s~~~~~SDH~  307 (345)
T d1i9za_         229 SYLFEYDQLNKQMLTGKVFPFFSELPITFPPTYKFDIGTDIYDTSDKHRVPAWTDRILYRG-ELVPHSYQSVPLYYSDHR  307 (345)
T ss_dssp             HHHHTTBHHHHHHHTTSSSTTCBCCCCCSCCCBCBCTTSSCBCCSTTCCCCBCCEEEEEES-SCEEEEEEECCCCSSSBC
T ss_pred             hHHHHHHHHHhhhhccCcccCcccCCCCCCCCCeEECCCCccCCCCCeeCccccceEEeeC-ceeeeeeeccCCCCCCcc
Confidence            999999998                                 3456899999999999986 478899999999999999


Q ss_pred             CeeeeEEEEEEeccchhhhhhhh
Q 046944          334 PVKAIFSVEVRVLRTLKGIQSFF  356 (381)
Q Consensus       334 PV~a~f~v~v~~~~~~~~~~~~~  356 (381)
                      ||+|.|.++|+.+++.|+.| +|
T Consensus       308 PV~a~f~v~v~~~~~~~~~~-~~  329 (345)
T d1i9za_         308 PIYATYEANIVKVDREKKKI-LF  329 (345)
T ss_dssp             CEEEEEEEEEEEECHHHHHH-HH
T ss_pred             cEEEEEEEEEEEECHHHHHH-HH
Confidence            99999999999999876544 55
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Back     information, alignment and structure
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Back     information, alignment and structure
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]} Back     information, alignment and structure
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]} Back     information, alignment and structure
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure