Citrus Sinensis ID: 046982

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
MVKFLPIFATQIIFLLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGKMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHccEEccccccccccccccEEEEEEEEEEEccccccccEEEEccccccccccccEEEEEEcccccccccccccEEEEEEEEEEEcccccEEEEEEEEEEEccEEcccccEEEcccEEEEEEEEEEEEEEEEccccccEEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEEcccccccEEEEEccccccccccccEEEEEcccccccccccccccccccEEEEEccccccEEEEEEEEEEEcccccccEEEEccccHEEEEEEEEEEEEEEEccccccEEEEEEEEEEEc
Coil and Loop (DISEMBL)
MVKFLPIFATQIIFLLFLLSSFTKIQVHGYAKTMNKNlmglkkekltHFQIHwhdiqsgqnptpisvvrpptntstngfgiinmidnpltagpemsskmVGRAQGFYALASQEEVGLLMAMNFAFIegkyngkmpviegngLFRFARGYVQarthnfdpktgdatvQYNVYVMHY
Flexible Loop (DISEMBL)
MVKFLPIFATQIIFLLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGKMPVIEGNGLFRFARGYVQArthnfdpktgdatvqYNVYVMHY
Low Complexity Region (SEG)
MVKFLPIFATQIIfllfllssfTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGKMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY
Disordered region (IsUnstruct)
**KFLPIFATQIIFLLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQS*****************TNGFGIINMIDNPL**********VGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGKMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVM**
Disordered Region (DISOPRED)
******IFATQIIFLLFLLSSFTKIQVHGY***************LTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGKMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY
Disordered Region (DISEMBL)
MVKFLPIFATQIIFLLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGKMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY
Disordered Region (DISPRO)
*VKFLPIFATQIIFLLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGKMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVKFLPIFATQIIFLLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGKMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
P13240	184	Disease resistance respon	N/A	no	0.674	0.641	0.268	0.0005

>sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2

 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 27/145 (18%)

Query: 52  HWHDI----QSGQNPTPISVVRPPTNTST-----NGFGIINMIDNPLTAGPEMSSKMVGR 102
           ++HDI    ++  N T   V  P   + T     + FG I + D+P+T    +SSK VGR
Sbjct: 37  YFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQVGR 96

Query: 103 AQGFYALASQEEVGLLMAMNFAFIEGKYNGKM------PVIE---------GNGLFRFAR 147
           AQGFY   ++      ++  F      + G +      P++          G G F   R
Sbjct: 97  AQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAGADPIVAKTRDISVTGGTGDFFMHR 156

Query: 148 GYVQARTHNFDPKTGDATVQYNVYV 172
           G     T  F+   G+A  +  VY+
Sbjct: 157 GIATITTDAFE---GEAYFRLGVYI 178

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
224052982	195	predicted protein [Populus trichocarpa]	0.994	0.892	0.602	2e-56
256010124	190	dirigent-like protein 1 [Gossypium hirsu	0.948	0.873	0.581	1e-55
256010126	197	dirigent-like protein 2 [Gossypium hirsu	0.988	0.878	0.572	1e-55
224077362	193	predicted protein [Populus trichocarpa]	0.92	0.834	0.576	2e-54
224073184	193	predicted protein [Populus trichocarpa]	0.92	0.834	0.570	1e-53
359806765	194	uncharacterized protein LOC100775617 pre	0.977	0.881	0.556	2e-53
224148724	195	predicted protein [Populus trichocarpa]	1.0	0.897	0.517	4e-53
225435678	194	PREDICTED: disease resistance response p	0.954	0.860	0.544	2e-51
388515771	196	unknown [Medicago truncatula]	0.891	0.795	0.557	9e-50
388508776	200	unknown [Lotus japonicus]	0.96	0.84	0.546	4e-49

>gi|224052982|ref|XP_002297648.1| predicted protein [Populus trichocarpa] gi|118484908|gb|ABK94320.1| unknown [Populus trichocarpa] gi|222844906|gb|EEE82453.1| predicted protein [Populus trichocarpa]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/196 (60%), Positives = 146/196 (74%), Gaps = 22/196 (11%)

Query: 1   MVKFLPIFATQIIFLLFLLSSFTKI-----QVHGYAKTMNKNLMGLKKEKLTHFQIHWHD 55
           M + +PI A++ I LL LLSSF  I     Q H + +++++ L+GLKKEKL+HF+++WHD
Sbjct: 1   MARSVPILASKFITLL-LLSSFATILVTGDQDHEFVRSLDRKLLGLKKEKLSHFKLYWHD 59

Query: 56  IQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEV 115
           I +GQNP+ + VV PP+NTS   FG++ MIDNPLT GPEMSSK+VGRAQG YA ASQ+++
Sbjct: 60  ILTGQNPSAVQVVPPPSNTSRTAFGLVRMIDNPLTLGPEMSSKLVGRAQGLYAQASQQDI 119

Query: 116 GLLMAMNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDP 159
           GLLMAMNFAFIEGKYNG                +MPVI G+GLFRFARGYVQARTH  D 
Sbjct: 120 GLLMAMNFAFIEGKYNGSTITVLGKNAVFSTVREMPVIGGSGLFRFARGYVQARTHKLDM 179

Query: 160 KTGDATVQYNVYVMHY 175
            TGDATV+YNVYV HY
Sbjct: 180 ATGDATVEYNVYVFHY 195

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|256010124|gb|ACU55135.1| dirigent-like protein 1 [Gossypium hirsutum]

 Score =  221 bits (562), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/184 (58%), Positives = 136/184 (73%), Gaps = 18/184 (9%)

Query: 8   FATQIIFLLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISV 67
            A   IF +F++S+  +     +A+TM+K ++G+KKEKL+HF+++WHDI  G+N T + V
Sbjct: 9   LAAHFIFTIFIVSALAE-NGSSFARTMDKKVLGMKKEKLSHFRLYWHDIVGGKNATAVPV 67

Query: 68  VRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIE 127
           V P  N ST  FG+I++ID+PLT  PE+SSKMVGRAQGFY+ ASQ+EVGLLMAMNFAF+E
Sbjct: 68  VFPSRN-STTAFGMISVIDDPLTMRPELSSKMVGRAQGFYSAASQQEVGLLMAMNFAFME 126

Query: 128 GKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVY 171
           GKYNG                +MPVI G+GLFRFARGYV+ARTH FDP TGDA VQY+ Y
Sbjct: 127 GKYNGSTITILGRNTVFSKAREMPVIGGSGLFRFARGYVEARTHLFDPATGDAVVQYDCY 186

Query: 172 VMHY 175
           VMHY
Sbjct: 187 VMHY 190

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|256010126|gb|ACU55136.1| dirigent-like protein 2 [Gossypium hirsutum]

 Score =  220 bits (561), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 114/199 (57%), Positives = 140/199 (70%), Gaps = 26/199 (13%)

Query: 1   MVKFLPIFATQIIFLLFLLSSFTKIQV--------HGYAKTMNKNLMGLKKEKLTHFQIH 52
           M +   + A++ IFL  +LSS   I+         HG+ +++++  MGLKKEKL+HF+I+
Sbjct: 1   MARIPLLLASKFIFL-SILSSSGVIRCTRGENNDDHGFIQSLDRESMGLKKEKLSHFRIY 59

Query: 53  WHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQ 112
           WHDI SG+N T I VVRP +N S  GFGIINMIDNPLT GP +SSK+VGRAQGFYAL+SQ
Sbjct: 60  WHDIVSGRNATSIRVVRP-SNASVTGFGIINMIDNPLTLGPNLSSKLVGRAQGFYALSSQ 118

Query: 113 EEVGLLMAMNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHN 156
           EEVGLLM+MNFAF EGKYNG                +M VI G+GLFRFARGYVQART+ 
Sbjct: 119 EEVGLLMSMNFAFTEGKYNGSTITVLGRNPVFNKVREMRVIGGSGLFRFARGYVQARTNT 178

Query: 157 FDPKTGDATVQYNVYVMHY 175
            +  TGDA V+Y  YVMHY
Sbjct: 179 LNLTTGDAIVEYTCYVMHY 197

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077362|ref|XP_002335799.1| predicted protein [Populus trichocarpa] gi|222834872|gb|EEE73321.1| predicted protein [Populus trichocarpa]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/177 (57%), Positives = 128/177 (72%), Gaps = 16/177 (9%)

Query: 15  LLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNT 74
           LL LLSSF   +   + +++++ L GLKKEKLTHF+++WHDI S  NPT + +VR P+NT
Sbjct: 17  LLTLLSSFVTGENQDFVRSLDRKLYGLKKEKLTHFRVYWHDIYSAPNPTAMPIVRAPSNT 76

Query: 75  STNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNG-- 132
           S   FG I+MID+PLT  PE+SSK++GRAQGFY  A QEE  LLMAMNF F++GKYNG  
Sbjct: 77  SATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMAMNFVFLQGKYNGST 136

Query: 133 --------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY 175
                         +MPVI G+GLFRFARGY QA TH+FD K+GDA V+YNVYV+HY
Sbjct: 137 ISILGRNHVFSKVREMPVIGGSGLFRFARGYAQASTHSFDLKSGDAVVEYNVYVLHY 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073184|ref|XP_002304013.1| predicted protein [Populus trichocarpa] gi|222841445|gb|EEE78992.1| predicted protein [Populus trichocarpa]

 Score =  214 bits (544), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 101/177 (57%), Positives = 128/177 (72%), Gaps = 16/177 (9%)

Query: 15  LLFLLSSFTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNT 74
           LL LLSSF   +   + +++++ L GLKKEKLTHF+++WHDI S  NPT + +VR P+NT
Sbjct: 17  LLTLLSSFVTGENQDFVRSLDRKLYGLKKEKLTHFRVYWHDIYSAPNPTAMPIVRAPSNT 76

Query: 75  STNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNG-- 132
           S   FG I+MID+PLT  PE+SSK++GRAQGFY  A QEE  LLMAMNF F++GKYNG  
Sbjct: 77  SATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEEAALLMAMNFVFLQGKYNGST 136

Query: 133 --------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY 175
                         +MPVI G+GLFRFARGY QA T++F+ KTGDA V+YNVYV+HY
Sbjct: 137 ISILGRNHVFSKVREMPVIGGSGLFRFARGYAQANTYSFNAKTGDAVVEYNVYVLHY 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806765|ref|NP_001241301.1| uncharacterized protein LOC100775617 precursor [Glycine max] gi|255636993|gb|ACU18829.1| unknown [Glycine max]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/194 (55%), Positives = 136/194 (70%), Gaps = 23/194 (11%)

Query: 5   LPIFATQIIFLLFLLSSFTKIQVHG-----YAKTMNKNLMGLK-KEKLTHFQIHWHDIQS 58
           +P     + F  FLL S     ++G     +   +++ L+GLK KEKL+HF+ +WHDI S
Sbjct: 1   MPTLNDVLTFSFFLLLSCYCHLLNGQEDTSFGHAIDRKLLGLKRKEKLSHFKFYWHDIVS 60

Query: 59  GQNPTPISVVRPPTN-TSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGL 117
           G+NP+ ++VV PPT   +T  FG++NMIDNPLT GPE+SSK+VG++QGFYA ASQ E+GL
Sbjct: 61  GRNPSSVAVVMPPTRMNTTTAFGLVNMIDNPLTLGPELSSKLVGKSQGFYASASQSEIGL 120

Query: 118 LMAMNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKT 161
           LMAMNFAFIEGKYNG                +MPVI G+GLFRFARGY +ARTH FD K 
Sbjct: 121 LMAMNFAFIEGKYNGSTITILGRNCVFHKVREMPVIGGSGLFRFARGYAEARTHWFDLKA 180

Query: 162 GDATVQYNVYVMHY 175
           GDA V+YNVYVMHY
Sbjct: 181 GDAIVEYNVYVMHY 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224148724|ref|XP_002336701.1| predicted protein [Populus trichocarpa] gi|222836553|gb|EEE74960.1| predicted protein [Populus trichocarpa]

 Score =  212 bits (540), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 101/195 (51%), Positives = 133/195 (68%), Gaps = 20/195 (10%)

Query: 1   MVKFLPIFATQIIFLLFLLSSFTKIQV----HGYAKTMNKNLMGLKKEKLTHFQIHWHDI 56
           M + +PI  +++I L  +LS    I       G+ +++++ L G KKEKLTHF+++WHDI
Sbjct: 1   MARIVPIIVSKLIILSTILSPLAIIHASKENQGFVRSLDRKLYGFKKEKLTHFRVYWHDI 60

Query: 57  QSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVG 116
            S  NPT I +V  P+NTS   FG ++MID+PLT  PE+SSK++GRAQGFY  A QEE  
Sbjct: 61  YSAPNPTAIPIVTSPSNTSATLFGSLSMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETA 120

Query: 117 LLMAMNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPK 160
           LLMAMNF F++GKYNG                +MPVI G+GLFRFARGY QA T++F+ K
Sbjct: 121 LLMAMNFVFLQGKYNGSTISILGRNHVFSKVREMPVIGGSGLFRFARGYAQANTYSFNAK 180

Query: 161 TGDATVQYNVYVMHY 175
           TGDA V+YNVYV+HY
Sbjct: 181 TGDAVVEYNVYVLHY 195

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435678|ref|XP_002283403.1| PREDICTED: disease resistance response protein 206 [Vitis vinifera]

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 104/191 (54%), Positives = 132/191 (69%), Gaps = 24/191 (12%)

Query: 5   LPIFATQIIFLLFLLSSFTKIQVHG----YAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQ 60
           LP + +  IFL+F   S+  I + G    Y K ++   MG++KEKL+HF+ +WHDI SG 
Sbjct: 8   LPFYLSFFIFLIF---SYAAIPILGDEYSYVKQVDPKKMGMRKEKLSHFRFYWHDIVSGP 64

Query: 61  NPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMA 120
           NP+ I VV PPTN ST  FG+INMIDNPLT GP++SSKMVG+AQG Y  ASQEE+GLLM 
Sbjct: 65  NPSSIQVVSPPTN-STTAFGLINMIDNPLTVGPKLSSKMVGKAQGLYTSASQEEIGLLMI 123

Query: 121 MNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDA 164
           MNFAFI+ KYNG                +M VI G+GLFRFA+GYVQ +T+ F+  T DA
Sbjct: 124 MNFAFIDDKYNGSTFTVLGRNTVLSKVREMSVIGGSGLFRFAKGYVQVKTYTFNSTTKDA 183

Query: 165 TVQYNVYVMHY 175
           T++YN YV+HY
Sbjct: 184 TIEYNAYVLHY 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515771|gb|AFK45947.1| unknown [Medicago truncatula]

 Score =  201 bits (511), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 97/174 (55%), Positives = 125/174 (71%), Gaps = 18/174 (10%)

Query: 20  SSFTKIQVHGYAKTMNKNLMGL-KKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNT-STN 77
           S+  K     + + +++ L+GL KKEKL+HF+++WHDI SG+NPT +++V P +   ST 
Sbjct: 23  STLEKEDTFDFVRPIDRKLLGLNKKEKLSHFKLYWHDIVSGKNPTSVAIVPPSSKVNSTT 82

Query: 78  GFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNG----- 132
            FG+++MIDNPLT GPE+SSK+VGRAQGFYA ASQEE+G LM MNFAFIEGKYNG     
Sbjct: 83  FFGLVSMIDNPLTLGPELSSKLVGRAQGFYASASQEEIGFLMTMNFAFIEGKYNGSTITI 142

Query: 133 -----------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY 175
                      +MPV+ G+GLFRFARGY +A TH  D K GDA V+YNV+V HY
Sbjct: 143 LGRNHACNKVREMPVVGGSGLFRFARGYAEATTHWIDAKAGDACVEYNVHVFHY 196

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508776|gb|AFK42454.1| unknown [Lotus japonicus]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 105/192 (54%), Positives = 129/192 (67%), Gaps = 24/192 (12%)

Query: 8   FATQIIFLLF----LLSSFTKIQVHG---YAKTMNKNLMGL-KKEKLTHFQIHWHDIQSG 59
           F T   FLL     L SS T  +  G   + + +++ L+GL KKEKL+HF+ +WHDI SG
Sbjct: 9   FLTPCFFLLLSFHALTSSATTAEQEGTSDFVRPIDRKLLGLHKKEKLSHFKFYWHDILSG 68

Query: 60  QNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLM 119
           ++PT + +V P    ST  FG I+MIDNPLT GP +SSK+VGRAQGFY  ASQ E+  LM
Sbjct: 69  RSPTSVPIVPPAYKNSTTFFGAISMIDNPLTLGPSLSSKLVGRAQGFYGSASQSELSALM 128

Query: 120 AMNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGD 163
           AMNFAFIEGKYNG                +MPVI G+GLFRFARGY +ART+ FD K+GD
Sbjct: 129 AMNFAFIEGKYNGSTITILGRNPVFSKVREMPVIGGSGLFRFARGYAEARTNWFDLKSGD 188

Query: 164 ATVQYNVYVMHY 175
           A V+YNVYV HY
Sbjct: 189 AVVEYNVYVFHY 200

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
TAIR|locus:2196282	185	AT1G58170 "AT1G58170" [Arabido	0.851	0.805	0.559	1.2e-44
TAIR|locus:2035661	187	AT1G55210 "AT1G55210" [Arabido	0.971	0.909	0.5	5.9e-41
TAIR|locus:2091521	186	AT3G13650 "AT3G13650" [Arabido	0.971	0.913	0.471	6.1e-39
TAIR|locus:2154359	191	AT5G49040 "AT5G49040" [Arabido	0.988	0.905	0.461	5.5e-38
TAIR|locus:2009769	189	AT1G65870 "AT1G65870" [Arabido	0.954	0.883	0.403	1.3e-31
TAIR|locus:2091551	173	AT3G13662 "AT3G13662" [Arabido	0.885	0.895	0.418	4.9e-30
TAIR|locus:2162361	185	AT5G42500 "AT5G42500" [Arabido	0.805	0.762	0.419	1.7e-27
TAIR|locus:2017689	193	AT1G22900 "AT1G22900" [Arabido	0.845	0.766	0.420	4.5e-27
TAIR|locus:2091536	125	AT3G13660 "AT3G13660" [Arabido	0.588	0.824	0.55	4.5e-27
TAIR|locus:2162366	182	AT5G42510 "AT5G42510" [Arabido	0.828	0.796	0.386	3.6e-25

TAIR|locus:2196282 AT1G58170 "AT1G58170" [Arabidopsis thaliana (taxid:3702)]

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 94/168 (55%), Positives = 121/168 (72%)

Query:    25 IQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTN-TSTNGFGIIN 83
             I V G  +T+  N +  KKEKLTHF+++WHDI +GQ+ + +S++ PP   T   GFG++ 
Sbjct:    20 ISVTG--ETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMR 77

Query:    84 MIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNG----------- 132
             MIDNPLT  P++SSKMVGRAQGFYA  S+EE+GLLMAMNFA ++GKYNG           
Sbjct:    78 MIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSV 137

Query:   133 -----KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY 175
                  +MPVI G+GLFRFARGYVQA TH F+ KTG+A V+YN Y++HY
Sbjct:   138 FDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2035661 AT1G55210 "AT1G55210" [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 96/192 (50%), Positives = 125/192 (65%)

Query:     1 MVKFLPIFATQIIXXXXXXXXXTKIQVHGYAKTMNKNLMGL-KKEKLTHFQIHWHDIQSG 59
             M K +   A QI+                +A+TM++ L+GL KKEKLTHF+++WHDI SG
Sbjct:     1 MAKLIFFLAVQILFLAVVSSAGDG---EDFARTMDRKLLGLHKKEKLTHFKVYWHDILSG 57

Query:    60 QNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLM 119
              NPT I +  P TN+S   FG I+MIDN LTA   M+S ++G+AQGFYA A+Q+E+G LM
Sbjct:    58 PNPTSIMIQPPVTNSSY--FGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLM 115

Query:   120 AMNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGD 163
             AMNFAF  GKYNG                +MP++ G+GLFRFARGYV+ART   + K GD
Sbjct:   116 AMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGD 175

Query:   164 ATVQYNVYVMHY 175
             ATV+Y+ YV+HY
Sbjct:   176 ATVEYSCYVLHY 187

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2091521 AT3G13650 "AT3G13650" [Arabidopsis thaliana (taxid:3702)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 90/191 (47%), Positives = 119/191 (62%)

Query:     1 MVKFLPIFATQIIXXXXXXXXXTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQ 60
             M K + I  TQI+            +   +AKT++K   GL+KEKLTHF+++WHDI SG 
Sbjct:     1 MAKLILIIVTQILLIAAVVSAR---KGENFAKTIDKKHFGLRKEKLTHFRVYWHDILSGS 57

Query:    61 NPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMA 120
             NP+ + V+ PP + S+  FG + +IDN LT    ++S +VG+AQG YA   Q +   LM 
Sbjct:    58 NPSSV-VINPPISNSSF-FGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMV 115

Query:   121 MNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDA 164
             MNFAF  GKYNG                +MPVI G+GLFRFARGYV+ART  FD K+GDA
Sbjct:   116 MNFAFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDA 175

Query:   165 TVQYNVYVMHY 175
             TV+Y+ YV+HY
Sbjct:   176 TVEYSCYVLHY 186

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

TAIR|locus:2154359 AT5G49040 "AT5G49040" [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 89/193 (46%), Positives = 121/193 (62%)

Query:     1 MVKFLPIFATQIIXXXXXXXXXTKIQVHGYAKTMNKNLMGL-KKEKLTHFQIHWHDIQSG 59
             M K + I   QI+            +   +A+T+N+  +GL KKEKLTH +++WHDI +G
Sbjct:     1 MSKLILILTAQILLLTATALAGKNGE--DFARTINRKHLGLGKKEKLTHLRVYWHDIVTG 58

Query:    60 QNPTPISVVRPPTNTSTNG-FGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLL 118
             +NP+ I +  P    S++  FG I MIDN LT    ++S +VG+AQG Y  A+Q+E+GLL
Sbjct:    59 RNPSSIRIQGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLL 118

Query:   119 MAMNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTG 162
             MAMN AF  GKYNG                +MPV+ G+G+FRFARGYV+ART  FD KTG
Sbjct:   119 MAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTG 178

Query:   163 DATVQYNVYVMHY 175
             DATV+ N Y++HY
Sbjct:   179 DATVESNCYILHY 191

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2009769 AT1G65870 "AT1G65870" [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 77/191 (40%), Positives = 110/191 (57%)

Query:     1 MVKFLPIFATQIIXXXXXXXXXTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQ 60
             ++  LP+F   I+         T  +   ++ T+     G K +KLTH   ++HDI SG 
Sbjct:     6 LLLLLPLFLALILAA-------TITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGD 58

Query:    61 NPTPISVVR-PPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLM 119
              PT + V   P TN+S  GFG++ ++D+ LT GPE++S+ VGRAQG YA A Q ++GLLM
Sbjct:    59 KPTSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLM 118

Query:   120 AMNFAFIEGKYN-------GK---------MPVIEGNGLFRFARGYVQARTHNFDPKTGD 163
             A N  F +GK++       G+         MP+I G G FRF RGY  A+T  F+  +GD
Sbjct:   119 AFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGD 178

Query:   164 ATVQYNVYVMH 174
             A V+YNVY+ H
Sbjct:   179 AVVEYNVYIWH 189

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:2091551 AT3G13662 "AT3G13662" [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 75/179 (41%), Positives = 107/179 (59%)

Query:     1 MVKFLPIFATQIIXXXXXXXXXTKIQVHGYAKTMN-KNLMGLKKEKLTHFQIHWHDIQSG 59
             M   + IFA QI+          ++      +TMN K+L   KKEKLTH +++WH+  +G
Sbjct:     1 MTNLILIFAAQILLFYAVASVGDEL-----GRTMNGKHLGPYKKEKLTHLRVYWHNSVNG 55

Query:    60 QNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLM 119
             +NP+ + + +P  N+S +G   I M+D+PLT     ++ +VG+AQG Y  A+Q E+G LM
Sbjct:    56 RNPSSVMIQQPVLNSSLSGS--ITMMDDPLTFDVPRNATVVGQAQGMYVAAAQGEIGFLM 113

Query:   120 AMNFAFIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTG 162
              MNFAF  GKYNG                +MPV+ G+G+FRFARGYV+ART +FD K G
Sbjct:   114 VMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSGIFRFARGYVEARTKSFDLKAG 172

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2162361 AT5G42500 "AT5G42500" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 68/162 (41%), Positives = 91/162 (56%)

Query:    31 AKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPP-TNTSTNGFGIINMIDNPL 89
             A +  K   G K +K TH   ++HD+ SG  PT + V     TN+S   FG+I + D+PL
Sbjct:    27 AYSTTKPCQGYKPDKFTHLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPL 86

Query:    90 TAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNG----------------K 133
             T GP+ SSK VGRAQG YAL + + +   M  N AF  G++NG                +
Sbjct:    87 TEGPDPSSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVRE 146

Query:   134 MPVIEGNGLFRFARGYVQARTHNFDPKTG-DATVQYNVYVMH 174
             MP+I G G FRFARGY QA+T+      G DA V+YNV++ H
Sbjct:   147 MPIIGGTGAFRFARGYAQAKTYKV---VGLDAVVEYNVFIWH 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2017689 AT1G22900 "AT1G22900" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 71/169 (42%), Positives = 92/169 (54%)

Query:    23 TKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPP-TNTSTNGFGI 81
             T  Q   Y+KT      G K +KLTH   ++HDI SG  PT I V   P TN+S   FG 
Sbjct:    29 TVTQSKPYSKTTP--FQGNKPDKLTHLHFYFHDIISGDKPTTIRVAEAPGTNSSATVFGA 86

Query:    82 INMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNG--------- 132
             + ++D P+T GPE+SSK VGRAQG YA    +  G  M  NF F EG++NG         
Sbjct:    87 VLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRN 146

Query:   133 -------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMH 174
                    ++P+I G G FRFARGY   +T+       DA V+YNV++ H
Sbjct:   147 PILLEERELPIIGGTGDFRFARGYALPKTYKV--VNIDAVVEYNVFIWH 193

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2091536 AT3G13660 "AT3G13660" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 66/120 (55%), Positives = 84/120 (70%)

Query:    72 TNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYN 131
             +N+ST+ FG I M DN LT+   ++S +VG++QGFYA A+Q E+G LMAMNFAF  GKYN
Sbjct:     7 SNSSTS-FGSITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYN 65

Query:   132 G----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMHY 175
             G                +M V+ G+G+FR ARGYV+ART  FDPKTGDATV+YN YV+HY
Sbjct:    66 GSTITILGRNTVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYVLHY 125

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2162366 AT5G42510 "AT5G42510" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 65/168 (38%), Positives = 90/168 (53%)

Query:    25 IQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRP-PTNTSTNGFGIIN 83
             + V  Y+ T      G K EK TH   ++HD+ SG  PT + V    PT T    FG+I 
Sbjct:    20 VSVTAYSTTTP--YQGYKPEKFTHLHFYFHDVISGDKPTAVKVAEARPTTTLNVKFGVIM 77

Query:    84 MIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNG----------- 132
             + D+PLT GP+ SSK VGRAQG YA  + +++   M  N+ F  G++NG           
Sbjct:    78 IADDPLTEGPDPSSKEVGRAQGMYASTAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDI 137

Query:   133 -----KMPVIEGNGLFRFARGYVQARTHNFDPKTG-DATVQYNVYVMH 174
                  ++P+I G G FRFARGY   +T+      G DA V+YNV++ H
Sbjct:   138 FSKVRELPIIGGTGAFRFARGYALPKTYKI---VGLDAVVEYNVFIWH 182

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00010084 SubName- Full=Putative uncharacterized protein; (195 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	175
pfam03018	144	pfam03018, Dirigent, Dirigent-like protein	4e-52

>gnl|CDD|217321 pfam03018, Dirigent, Dirigent-like protein

 Score =  162 bits (413), Expect = 4e-52
 Identities = 69/146 (47%), Positives = 88/146 (60%), Gaps = 18/146 (12%)

Query: 45  KLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQ 104
           KLTH   + HDI +G N T + V  PP   S+ GFG + +ID+PLT GP+++SK+VGRAQ
Sbjct: 1   KLTHLHFYMHDIVTGPNATAVQVASPPGTNSS-GFGTVVVIDDPLTEGPDLNSKLVGRAQ 59

Query: 105 GFYALASQEEVGLLMAMNFAFIEGKYNGK----------------MPVIEGNGLFRFARG 148
           GFY  ASQ+ + LLMA  F F  G+YNG                 + V+ G G FR ARG
Sbjct: 60  GFYVYASQDGLSLLMAFTFVFTSGEYNGSTLAVMGRNPVFEEVRELSVVGGTGKFRMARG 119

Query: 149 YVQARTHNFDPKTGDATVQYNVYVMH 174
           Y  ART+ F   +GDA V+ NVYV H
Sbjct: 120 YALARTY-FSLTSGDAIVELNVYVKH 144

This family contains a number of proteins which are induced during disease response in plants. Members of this family are involved in lignification. Length = 144

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
PF03018	144	Dirigent: Dirigent-like protein; InterPro: IPR0042	100.0
PF06351	176	Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR	96.94
PLN02343	229	allene oxide cyclase	95.55

>PF03018 Dirigent: Dirigent-like protein; InterPro: IPR004265 This family contains a number of proteins which are induced during disease response in plants

Probab=100.00  E-value=1.4e-47  Score=301.96  Aligned_cols=128  Identities=47%  Similarity=0.848  Sum_probs=120.0

Q ss_pred             CeeEEEEEeeecCCCCCCceEEEecCCCCCCCCCceeEEEEecccccCCCCCCcceEeEEEEEEEecCCcceEEEEEEEE
Q 046982           45 KLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFA  124 (175)
Q Consensus        45 ~~t~l~fY~Hd~~sg~n~t~~~v~~~~~~~~~~~FG~~~V~Dd~lt~Gp~~~Sk~VGRaQG~~~~~~~~~~~~~~~~~~v  124 (175)
                      |++||+|||||+++|||+|++.|+.++.+ ...+||+++|+|||||+||+++||+||||||+|+.+++++.+|+++++++
T Consensus         1 ~~t~l~fY~H~~~~g~n~t~~~v~~~~~~-~~~~FG~~~V~D~~lt~gp~~~S~~VGraqG~~~~~s~~~~~~~~~~~~v   79 (144)
T PF03018_consen    1 KETHLHFYMHDIVSGPNPTAVVVAEPPGP-SSSGFGTVVVFDDPLTEGPDPDSKLVGRAQGFYVSASLDGSSWFMSFTLV   79 (144)
T ss_pred             CceEEEEEeeecCCCCCCCEEEeccCCCC-CCCCCcEEEEEeeceEcCCCCCCccceEEEEEEEeecccCccEEEEEEEE
Confidence            68999999999999999999999988764 33389999999999999999999999999999999999999999999999


Q ss_pred             EccCccCC----------------eeeEEeccceeeeeEeEEEEEEEeeCCCCCCeEEEEEEEEEe
Q 046982          125 FIEGKYNG----------------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVMH  174 (175)
Q Consensus       125 F~~g~~~G----------------E~aVVGGTG~Fr~ArGya~~~t~~~~~~~~~~v~el~V~v~h  174 (175)
                      |++++|||                |||||||||+||||||||+++++ .+.+++++|+|||||++|
T Consensus        80 F~~g~~~GStl~v~G~~~~~~~~~e~~VVGGTG~Fr~ArG~~~~~~~-~~~~~~~~v~e~~v~~~h  144 (144)
T PF03018_consen   80 FEDGEYNGSTLSVMGRDPFFEPVRELAVVGGTGEFRMARGYAKLRTV-FDSSGGNAVLELNVHLFH  144 (144)
T ss_pred             EEecccCCCeEEEeCCCcccCcccEEeEecCCCeEcceEEEEEEEEE-eecCCCCEEEEEEEEEEC
Confidence            99999999                99999999999999999999999 333567899999999998

>PF06351 Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR009410 This family consists of several plant specific allene oxide cyclase proteins (5

Probab=96.94  E-value=0.02  Score=46.48  Aligned_cols=108  Identities=22%  Similarity=0.346  Sum_probs=65.1

Q ss_pred             CCCeeEEEEE-eeecCCCCCCceEEEecCCCCCCCCCceeEEEEecccccCCCCCCcceEeEEEEEEEecC----CcceE
Q 046982           43 KEKLTHFQIH-WHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQ----EEVGL  117 (175)
Q Consensus        43 ~~~~t~l~fY-~Hd~~sg~n~t~~~v~~~~~~~~~~~FG~~~V~Dd~lt~Gp~~~Sk~VGRaQG~~~~~~~----~~~~~  117 (175)
                      +.|...|++| +.+.-.|. |.-+++-+    .+....|..+=|.|+|++|.-  -+-+|--+|+-+.-..    .+..+
T Consensus         4 p~kvqel~vyeiNErdR~S-Pa~L~ls~----k~~nslGDlvpFsNklY~g~l--~~rlGitaG~Cvliq~~p~k~Gdry   76 (176)
T PF06351_consen    4 PTKVQELSVYEINERDRGS-PAYLRLSQ----KSVNSLGDLVPFSNKLYDGDL--QKRLGITAGICVLIQHVPEKKGDRY   76 (176)
T ss_dssp             ----EEEEEEEE--S-S---S--B--SS----SSSS-TT-EEEEEEEEEETTS--S-EEEEEEEEEEEEEEECCCTEEEE
T ss_pred             ccceEEEEEEEEcccccCC-CcEEEccc----ccchhcccccccccccccchh--hhhhcccceEEEEEEeccccCCceE
Confidence            4567788888 55543322 33333321    233568999999999999976  6789999999665432    33344


Q ss_pred             EEEEEEEEcc-C--ccCC--------eeeEEeccceeeeeEeEEEEEEEee
Q 046982          118 LMAMNFAFIE-G--KYNG--------KMPVIEGNGLFRFARGYVQARTHNF  157 (175)
Q Consensus       118 ~~~~~~vF~~-g--~~~G--------E~aVVGGTG~Fr~ArGya~~~t~~~  157 (175)
                      =-.+++.|-+ |  ...|        -++|.||||-|+.|+|-++++.+-+
T Consensus        77 EaiySfyfGdyGhISvqGpy~t~eDtyLAVTGGtGiF~g~~GqVkL~qivf  127 (176)
T PF06351_consen   77 EAIYSFYFGDYGHISVQGPYLTYEDTYLAVTGGTGIFEGVYGQVKLHQIVF  127 (176)
T ss_dssp             EEEEEEE-GGGEEEEEEEEEETTS-EEEEEEEEEETTTT-EEEEEEEEEET
T ss_pred             EEEEEEEecccceEEEecccccccceeEEEeccCceeecceEEEEEEEeec
Confidence            4566667744 3  2334        7999999999999999999988765

3.99.6 from EC). The allene oxide cyclase (AOC)-catalysed step in jasmonate (JA) biosynthesis is important in the wound response of tomato [].; GO: 0016853 isomerase activity, 0009507 chloroplast; PDB: 2GIN_A 2DIO_B 2BRJ_B 2Q4I_B 1Z8K_A 1ZVC_A.

>PLN02343 allene oxide cyclase

Probab=95.55  E-value=0.67  Score=39.11  Aligned_cols=111  Identities=21%  Similarity=0.342  Sum_probs=74.9

Q ss_pred             ccCCCeeEEEEE-eeecCCCCCCceEEEecCCCCCCCCCceeEEEEecccccCCCCCCcceEeEEEEEEEecC----Ccc
Q 046982           41 LKKEKLTHFQIH-WHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQ----EEV  115 (175)
Q Consensus        41 ~~~~~~t~l~fY-~Hd~~sg~n~t~~~v~~~~~~~~~~~FG~~~V~Dd~lt~Gp~~~Sk~VGRaQG~~~~~~~----~~~  115 (175)
                      .++.|...|.+| +.|.-.+. |.-.+.-+.+   .....|+.+=|.|.|++|.-  -|-+|--.|+-+.-..    .+.
T Consensus        52 ~~p~kvQel~VYEiNErDR~S-Pa~L~ls~k~---~~~sLGDlVPFsNKlY~g~L--~kRlGiTaG~Cvliq~~pek~gD  125 (229)
T PLN02343         52 PRPTKVQELSVYEINERDRGS-PAFLKLSKKS---VENALGDLVPFTNKLYTGDL--KKRLGITAGLCVLIQHVPEKKGD  125 (229)
T ss_pred             CCCceeEEEEEEEeccccCCC-cceEEcccCc---ccccccceeccccccccchh--hhhhcccceeEEEEEeccccCCc
Confidence            345677788888 44433222 2223322221   22568999999999999854  5678888888664432    344


Q ss_pred             eEEEEEEEEEcc-Cc--cCC--------eeeEEeccceeeeeEeEEEEEEEee
Q 046982          116 GLLMAMNFAFIE-GK--YNG--------KMPVIEGNGLFRFARGYVQARTHNF  157 (175)
Q Consensus       116 ~~~~~~~~vF~~-g~--~~G--------E~aVVGGTG~Fr~ArGya~~~t~~~  157 (175)
                      .+=..+++.|-| |.  -.|        -++|.||+|-|+.|+|-+++..+-+
T Consensus       126 ryEa~ySfyfGDyGHisvqGpyltyeDt~LaiTGGsGiFega~GqvkL~qivf  178 (229)
T PLN02343        126 RYEAIYSFYFGDYGHISVQGPYLTYEDTYLAITGGSGIFEGAYGQVKLHQIVF  178 (229)
T ss_pred             eeEEEEEEEecCcceeEEeccccccccceEEeecCcceeecceeEEEEeeeee
Confidence            566777788854 22  234        8999999999999999999988765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
2brj_A	188	Arabidopsis thaliana genomic DNA, chromosome 3, TA	98.36
4h6b_A	195	Allene oxide cyclase; B-barrel, oxylipins, fatty a	98.17

>2brj_A Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone\:K13N2; cyclase, jasmonate synthesis, allene oxide cyclase, beta barrel; 1.5A {Arabidopsis thaliana} SCOP: b.159.1.1 PDB: 2dio_A* 2gin_A 1z8k_A* 2q4i_A 1zvc_A

Probab=98.36  E-value=6.8e-06  Score=66.13  Aligned_cols=119  Identities=19%  Similarity=0.332  Sum_probs=82.3

Q ss_pred             CCCeeEEEEE-eeecCCCCCCceEEEecCCCCCCCCCceeEEEEecccccCCCCCCcceEeEEEEEEEec----CCcceE
Q 046982           43 KEKLTHFQIH-WHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALAS----QEEVGL  117 (175)
Q Consensus        43 ~~~~t~l~fY-~Hd~~sg~n~t~~~v~~~~~~~~~~~FG~~~V~Dd~lt~Gp~~~Sk~VGRaQG~~~~~~----~~~~~~  117 (175)
                      +.|...|.+| +.+.-.+. |.-.++-+    .+...-|..+.|+++|.+|..  -+.||.-+|.-+...    +.+..+
T Consensus        13 ~~~vq~l~vye~NE~dr~s-Pa~L~l~~----k~~~slGDlvpFsNkLydg~l--~~rvG~taG~Cv~~~~~p~~~gdry   85 (188)
T 2brj_A           13 PSKVQELSVYEINELDRHS-PKILKNAF----SLMFGLGDLVPFTNKLYTGDL--KKRVGITAGLCVVIEHVPEKKGERF   85 (188)
T ss_dssp             --CCEEEEEEEECCSCSCC-CCCBCCCS----SSSSCTTCEEEECCEEEETTS--SCEEEEEEEEEEEEEEEGGGTEEEE
T ss_pred             ccceEEEEEEEecccccCC-CceEEccc----ccCcCcccEEeeccccccccc--ceeccccceEEEEEEecCCCCCcEE
Confidence            3466778888 44433221 22222221    123458999999999997754  588999999977665    334556


Q ss_pred             EEEEEEEEcc-C--ccCC--------eeeEEeccceeeeeEeEEEEEEEeeCCCCCCeEEEEEEEEE
Q 046982          118 LMAMNFAFIE-G--KYNG--------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYVM  173 (175)
Q Consensus       118 ~~~~~~vF~~-g--~~~G--------E~aVVGGTG~Fr~ArGya~~~t~~~~~~~~~~v~el~V~v~  173 (175)
                      --.+++.|-+ |  ..+|        .++|.||||.|+.|||.++++...+.     ..++|.+|+.
T Consensus        86 E~tyS~yfgd~GhISvQGpy~t~~Dt~LAITGGTGif~gA~G~Vkl~~i~~P-----~k~~yTf~L~  147 (188)
T 2brj_A           86 EATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYP-----TKLFYTFYLK  147 (188)
T ss_dssp             EEEEEEECGGGEEEEEEEEEETTBCEEEEEEEEEETTTTCEEEEEEEEEETT-----TEEEEEEEEE
T ss_pred             EEEEEEEeCCCceEEEeccccccccceeeEecCcceEcceEEEEEEEeeccC-----ceEEEEEEEe
Confidence            6777777753 3  2344        89999999999999999999999863     2478888774

>4h6b_A Allene oxide cyclase; B-barrel, oxylipins, fatty acid, metabolites, allene-oxide C activity, isomerase; HET: 10X 10Y; 1.35A {Physcomitrella patens} PDB: 4h6c_A 4h6a_A* 4h69_A*

Probab=98.17  E-value=3.2e-05  Score=62.43  Aligned_cols=123  Identities=17%  Similarity=0.285  Sum_probs=79.8

Q ss_pred             cCCCeeEEEEE-eeecCCCCCCceEEEecCCCC---CCCCCceeEEEEecccccCCCCCCcceEeEEEEEEEec----CC
Q 046982           42 KKEKLTHFQIH-WHDIQSGQNPTPISVVRPPTN---TSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALAS----QE  113 (175)
Q Consensus        42 ~~~~~t~l~fY-~Hd~~sg~n~t~~~v~~~~~~---~~~~~FG~~~V~Dd~lt~Gp~~~Sk~VGRaQG~~~~~~----~~  113 (175)
                      ++.|...|++| +.|.-.+. |.-.++-+-...   ..-...|+.+.|+++|.+|..  -+-||-..|+-+.-.    +.
T Consensus        13 ~p~~vqel~VyEiNE~dr~s-Pa~l~l~~k~~~~~~~~~~slGDLvpFsnkLydg~l--~~RiGitaG~Cv~i~~~~~k~   89 (195)
T 4h6b_A           13 SPGHVQELFVYEINERDRGS-PVFLPFGGKKQPGTDAHVNSLGDLVPFSNKIYDGSL--KTRLGITAGLCTLISHSDQKN   89 (195)
T ss_dssp             ---CCEEEEEEEECCSCSCC-CCCBCTTCCBCTTTCCBCCCTTCEEEECCEEEETTS--CCEEEEEEEEEEEEEEETTTT
T ss_pred             CCceeEEEEEEEecccccCC-cceeecccccCccccccccccccccccccccccccc--cccccccccEEEEEeecCCCC
Confidence            35677788888 55543332 222332211111   112469999999999999986  678999999976653    23


Q ss_pred             cceEEEEEEEEEcc-Cc--cCC--------eeeEEeccceeeeeEeEEEEEEEeeCCCCCCeEEEEEEEE
Q 046982          114 EVGLLMAMNFAFIE-GK--YNG--------KMPVIEGNGLFRFARGYVQARTHNFDPKTGDATVQYNVYV  172 (175)
Q Consensus       114 ~~~~~~~~~~vF~~-g~--~~G--------E~aVVGGTG~Fr~ArGya~~~t~~~~~~~~~~v~el~V~v  172 (175)
                      +..+--.+++.|-+ |.  ..|        -++|+||||.|+.|+|-+++..+-+.     ..+-|..|+
T Consensus        90 GdryEci~Tf~fGD~GhIsvqGpy~t~eDs~lAITGGTGiF~Ga~GqVkl~qiv~p-----fklfytfyl  154 (195)
T 4h6b_A           90 GDRYEALYSFYFGDYGHISVQGPYITYEDSYLAITGGSGIFAGCYGQAKLHQIIFP-----FKLFYTFYL  154 (195)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEEEEETTBCEEEEEEEESGGGTTCEEEEEEEEEETT-----TEEEEEEEE
T ss_pred             CceEEEEEEEEecCCceEEEecceeccCceeEEEecCcceEcccEEEEEEeEeeee-----eeEEEEEEe
Confidence            34455666777765 32  233        89999999999999999999887763     234455554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d2brja1	174	Allene oxide cyclase, AOC {Thale cress (Arabidopsi	96.21

>d2brja1 b.159.1.1 (A:15-188) Allene oxide cyclase, AOC {Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]}

class: All beta proteins
fold: AOC barrel-like
superfamily: Allene oxide cyclase-like
family: Allene oxide cyclase-like
domain: Allene oxide cyclase, AOC
species: Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]

Probab=96.21  E-value=0.019  Score=43.53  Aligned_cols=91  Identities=23%  Similarity=0.377  Sum_probs=66.7

Q ss_pred             CCCCceeEEEEecccccCCCCCCcceEeEEEEEEEecC----CcceEEEEEEEEEcc-C--ccCC--------eeeEEec
Q 046982           75 STNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQ----EEVGLLMAMNFAFIE-G--KYNG--------KMPVIEG  139 (175)
Q Consensus        75 ~~~~FG~~~V~Dd~lt~Gp~~~Sk~VGRaQG~~~~~~~----~~~~~~~~~~~vF~~-g--~~~G--------E~aVVGG  139 (175)
                      .....|..+=|-|.|..|.-  .|-+|--.|+-+.-..    .+..+--.+++.|-| |  ...|        -++|+||
T Consensus        27 ~~n~lGDlVpFsNkly~g~l--~kRlGitaG~C~liq~~pek~gdryEa~ySfyfGDyGhISvqGpyltyeDtylaiTGG  104 (174)
T d2brja1          27 LMFGLGDLVPFTNKLYTGDL--KKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGG  104 (174)
T ss_dssp             SSSCTTCEEEECCEEEETTS--SCEEEEEEEEEEEEEEEGGGTEEEEEEEEEEECGGGEEEEEEEEEETTBCEEEEEEEE
T ss_pred             ccccccccccccchhcccch--hhhccceeeEEEEEEecCCcCcceeEEEEEEEecCcccEEEeccccccccceeeeecc
Confidence            34568999999999997754  5778999998665442    334566777788876 3  2344        8999999


Q ss_pred             cceeeeeEeEEEEEEEeeCCCCCCeEEEEEEEE
Q 046982          140 NGLFRFARGYVQARTHNFDPKTGDATVQYNVYV  172 (175)
Q Consensus       140 TG~Fr~ArGya~~~t~~~~~~~~~~v~el~V~v  172 (175)
                      ||-|+.|+|-+++..+-+.     ..+-|..|+
T Consensus       105 sGiFeGa~GqVkL~qivfP-----fKlfYTFyL  132 (174)
T d2brja1         105 AGIFEGAYGQVKLQQLVYP-----TKLFYTFYL  132 (174)
T ss_dssp             EETTTTCEEEEEEEEEETT-----TEEEEEEEE
T ss_pred             cceeecceeEEEEeeeeee-----eeEEEEEEE
Confidence            9999999999999887753     134455554