Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
ID Alignment Graph Length
Definition
E-value
Query 126
pfam02458
432
pfam02458, Transferase, Transferase family
9e-25
PLN02481
436
PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul
5e-21
PLN03157
447
PLN03157, PLN03157, spermidine hydroxycinnamoyl tr
3e-09
PLN02663
431
PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate
1e-08
>gnl|CDD|217048 pfam02458, Transferase, Transferase family
Back Hide alignment and domain information
Score = 96.7 bits (241), Expect = 9e-25
Identities = 36/143 (25%), Positives = 50/143 (34%), Gaps = 27/143 (18%)
Query: 2 DDQESLRFQIPGILFYKNNPSSSPTVQKEKIP----------------LWWIA------- 38
D + FYK S EK+ L
Sbjct: 28 DQILQTPVYVKACFFYKKPSEFSDETPSEKLKTSLSETLVSYYPLAGRLRSPGGRLEIDC 87
Query: 39 -SEGILFLKAEANFKLEQLGDAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVT--RCGG 95
EG F++A A+ +L D P LE LL ++ S PLL +QVT +CGG
Sbjct: 88 NDEGADFVEARADVELSDFLDGE-DPDDSLELLLPDLAVSSEGENWPLLAVQVTKFKCGG 146
Query: 96 FILALRFNHTMCDAIGLVQFLKT 118
F + NH + D L F+ +
Sbjct: 147 FAIGCSVNHAIADGYSLSTFMNS 169
This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase. Length = 432
>gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase
Back Show alignment and domain information
Score = 86.3 bits (214), Expect = 5e-21
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 40 EGILFLKAEANFKLEQLGDAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFI 97
EG++F++AEAN +E++GD +P L +L+ +VPG++ IL P L QVTR CGGF+
Sbjct: 100 EGVVFVEAEANCSIEEIGDITKPDPETLGKLVYDVPGAKNILEIPPLTAQVTRFKCGGFV 159
Query: 98 LALRFNHTMCDAIGLVQFLKT 118
L L NH M D IG ++F+ +
Sbjct: 160 LGLCMNHCMFDGIGAMEFVNS 180
>gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional
Back Show alignment and domain information
Score = 52.9 bits (127), Expect = 3e-09
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 39 SEGILFLKAEANFKLEQLGDAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGF 96
+ G+L ++AE+ KL+ GD P P E L+ +V ++ I PLLL+Q+T+ CGG
Sbjct: 89 AMGVLLIEAESEAKLDDFGDFS--PTPEFEYLIPSVDYTKPIHELPLLLVQLTKFSCGGI 146
Query: 97 ILALRFNHTMCDAIGLVQFL 116
L L +H + D + F+
Sbjct: 147 SLGLGISHAVADGQSALHFI 166
>gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Back Show alignment and domain information
Score = 51.5 bits (123), Expect = 1e-08
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
Query: 8 RFQIPGILFYKNNPSSS---PTVQKEK-----IPLWWIA----------------SEGIL 43
RF P + FY+ +S+ P V KE +P + +A +EG+L
Sbjct: 33 RFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLRRDEDGRIEIDCNAEGVL 92
Query: 44 FLKAEANFKLEQLGDAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVT--RCGGFILALR 101
F++A+ ++ GD P L QL+ V S GI PLL++QVT +CGG L +
Sbjct: 93 FVEADTPSVIDDFGDFA--PTLELRQLIPTVDYSGGISSYPLLVLQVTHFKCGGVSLGVG 150
Query: 102 FNHTMCDAIGLVQFLKT 118
H D + F+ T
Sbjct: 151 MQHHAADGFSGLHFINT 167
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability
Query
126
PLN03157
447
spermidine hydroxycinnamoyl transferase; Provision
99.97
PLN00140
444
alcohol acetyltransferase family protein; Provisio
99.97
PLN02663
431
hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn
99.96
PF02458
432
Transferase: Transferase family; InterPro: IPR0034
99.96
PLN02481
436
Omega-hydroxypalmitate O-feruloyl transferase
99.95
PF00668
301
Condensation: Condensation domain; InterPro: IPR00
96.37
PF03007
263
WES_acyltransf: Wax ester synthase-like Acyl-CoA a
94.66
PRK09294
416
acyltransferase PapA5; Provisional
94.61
COG4908
439
Uncharacterized protein containing a NRPS condensa
94.58
TIGR02946
446
acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b
92.37
PF00198 231
2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransfe
89.35
PRK10252
1296
entF enterobactin synthase subunit F; Provisional
89.25
PRK11856 411
branched-chain alpha-keto acid dehydrogenase subun
88.62
PF07247
480
AATase: Alcohol acetyltransferase; InterPro: IPR01
88.55
PRK11857 306
dihydrolipoamide acetyltransferase; Reviewed
88.2
PF00302 206
CAT: Chloramphenicol acetyltransferase; InterPro:
88.07
TIGR01349 435
PDHac_trf_mito pyruvate dehydrogenase complex dihy
87.95
PLN02528 416
2-oxoisovalerate dehydrogenase E2 component
87.78
PTZ00144 418
dihydrolipoamide succinyltransferase; Provisional
86.79
PRK14843 347
dihydrolipoamide acetyltransferase; Provisional
86.3
PRK11855 547
dihydrolipoamide acetyltransferase; Reviewed
86.02
PRK05704 407
dihydrolipoamide succinyltransferase; Validated
85.92
TIGR01347 403
sucB 2-oxoglutarate dehydrogenase complex dihydrol
85.82
PRK13757 219
chloramphenicol acetyltransferase; Provisional
85.74
PLN02226 463
2-oxoglutarate dehydrogenase E2 component
85.35
PRK11854 633
aceF pyruvate dehydrogenase dihydrolipoyltransacet
84.66
TIGR02927 590
SucB_Actino 2-oxoglutarate dehydrogenase, E2 compo
84.33
PLN02744 539
dihydrolipoyllysine-residue acetyltransferase comp
83.78
PRK12467
3956
peptide synthase; Provisional
83.57
TIGR01348 546
PDHac_trf_long pyruvate dehydrogenase complex dihy
83.56
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Back Hide alignment and domain information
Probab=99.97 E-value=2.6e-31 Score=213.93 Aligned_cols=123 Identities=30% Similarity=0.506 Sum_probs=104.1
Q ss_pred CCccccccccccEEEEecCCCCC---C-cccccccCc-----cc----------------ccCCCCcEEEEEEecCChhh
Q 047129 1 MDDQESLRFQIPGILFYKNNPSS---S-PTVQKEKIP-----LW----------------WIASEGILFLKAEANFKLEQ 55 (126)
Q Consensus 1 lddq~~~~~~v~~i~fY~~~~~~---~-~~~Lk~sLs-----fy----------------~c~~~Gv~f~ea~~~~~l~~ 55 (126)
|| |+.+++|++.||||+++... + .++||+||| || +|||+||+|+||+++++++|
T Consensus 27 lD-~~~~~~~v~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~~g~~~i~c~~~Gv~fveA~~~~~l~~ 105 (447)
T PLN03157 27 WD-QVGTITHVPTIYFYSPPWNTSSGSIIEILKDSLSRALVPFYPLAGRLRWIGGGRLELECNAMGVLLIEAESEAKLDD 105 (447)
T ss_pred hh-hccccccCCEEEEEeCCCccccccHHHHHHHHHHHHHhhccccCEEEEEcCCCcEEEEECCCCeEEEEEEeCCcHHH
Confidence 45 55679999999999865321 2 378999999 77 99999999999999999999
Q ss_pred hcCCCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 56 LGDAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 56 l~~~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
+.+. .+.+.+++|+|..+........|++.||||+ |||++||+++||+++||.|+++||++||++|||+
T Consensus 106 ~~~~--~~~~~~~~l~P~~~~~~~~~~~Pll~vQvT~F~cGG~~lg~~~~H~v~Dg~~~~~fl~aWA~~~rg~ 176 (447)
T PLN03157 106 FGDF--SPTPEFEYLIPSVDYTKPIHELPLLLVQLTKFSCGGISLGLGISHAVADGQSALHFISEWARIARGE 176 (447)
T ss_pred hhcc--CCCHHHHhhcCCCCcccccccCceEEEEEEEecCCCEEEEEEeeccccchHhHHHHHHHHHHHhcCC
Confidence 9863 3556788899976543344567999999998 9999999999999999999999999999999984
>PLN00140 alcohol acetyltransferase family protein; Provisional
Back Show alignment and domain information
Probab=99.97 E-value=1.5e-30 Score=209.52 Aligned_cols=121 Identities=26% Similarity=0.379 Sum_probs=100.7
Q ss_pred cccccccccEEEEecCCCCC-----C-cccccccCc-----cc------------ccCCCCcEEEEEEecCChhhhcCCC
Q 047129 4 QESLRFQIPGILFYKNNPSS-----S-PTVQKEKIP-----LW------------WIASEGILFLKAEANFKLEQLGDAV 60 (126)
Q Consensus 4 q~~~~~~v~~i~fY~~~~~~-----~-~~~Lk~sLs-----fy------------~c~~~Gv~f~ea~~~~~l~~l~~~~ 60 (126)
|+.++.|++.+|||+.+... + .++||+||| || +|||+||+|+||+++++++|+..
T Consensus 31 ~~~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~~i~cn~~Gv~fveA~~~~~l~d~l~-- 108 (444)
T PLN00140 31 QLTPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLK-- 108 (444)
T ss_pred hcccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCccccCCceeEccCCCceEEEEEecCcHHHhcC--
Confidence 56789999999999975421 1 388999999 77 89999999999999999999965
Q ss_pred CCCchHHhhhhccCCCC--CCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 61 QPPYPYLEQLLCNVPGS--QGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 61 ~~~~~~~~~l~~~~~~~--~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
.+....+++|+|..+.. ......|++.||||+ |||++||+++||+++||.|+++|+++||++|||+
T Consensus 109 ~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~rg~ 178 (444)
T PLN00140 109 HPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRGH 178 (444)
T ss_pred CCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeeeceEcccHHHHHHHHHHHHHHhcCC
Confidence 23334667888864321 122457999999999 9999999999999999999999999999999984
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Back Show alignment and domain information
Probab=99.96 E-value=9.3e-30 Score=203.89 Aligned_cols=122 Identities=33% Similarity=0.556 Sum_probs=103.4
Q ss_pred ccccccccccEEEEecCCCCC---CcccccccCc-----cc----------------ccCCCCcEEEEEEecCChhhhcC
Q 047129 3 DQESLRFQIPGILFYKNNPSS---SPTVQKEKIP-----LW----------------WIASEGILFLKAEANFKLEQLGD 58 (126)
Q Consensus 3 dq~~~~~~v~~i~fY~~~~~~---~~~~Lk~sLs-----fy----------------~c~~~Gv~f~ea~~~~~l~~l~~ 58 (126)
||+.+++|++.||||+.+... +.++||+||| || +||++||.|+||+++++++++.+
T Consensus 28 D~~~~~~~~~~v~fY~~~~~~~~~~~~~Lk~sLs~~L~~~yplaGRl~~~~~g~~~i~c~~~Gv~fv~A~~~~~l~~~~~ 107 (431)
T PLN02663 28 DLVVPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLRRDEDGRIEIDCNAEGVLFVEADTPSVIDDFGD 107 (431)
T ss_pred hcccccccccEEEEEcCCCCCCccCHHHHHHHHHHHHhhccccceeeeECCCCCEEEEECCCCceEEEEecCCCHHHhhc
Confidence 366789999999999965432 2478999999 77 89999999999999999999986
Q ss_pred CCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 59 AVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 59 ~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
. .+...+++|+|..+......+.|+|.+|||+ |||++||+++||+++||.|+.+|+++||+++||+
T Consensus 108 ~--~~~~~~~~l~P~~~~~~~~~~~P~l~vQvt~F~cGG~~lg~~~~H~v~Dg~g~~~fl~awa~~~rg~ 175 (431)
T PLN02663 108 F--APTLELRQLIPTVDYSGGISSYPLLVLQVTHFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGL 175 (431)
T ss_pred c--CCCHHHHhhcCCCCCccccccCceEEEEEEEeccCCEEEEEEecccccchHHHHHHHHHHHHHhcCC
Confidence 3 2446677899875433333468999999998 9999999999999999999999999999999984
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes
Back Show alignment and domain information
Probab=99.96 E-value=4.6e-30 Score=204.23 Aligned_cols=124 Identities=35% Similarity=0.542 Sum_probs=101.0
Q ss_pred CccccccccccEEEEecCCCCCC----cccccccCc-----cc---------------ccCCCCcEEEEEEecCChhhhc
Q 047129 2 DDQESLRFQIPGILFYKNNPSSS----PTVQKEKIP-----LW---------------WIASEGILFLKAEANFKLEQLG 57 (126)
Q Consensus 2 ddq~~~~~~v~~i~fY~~~~~~~----~~~Lk~sLs-----fy---------------~c~~~Gv~f~ea~~~~~l~~l~ 57 (126)
|.|+.+++|++.||||+.+.+.. .+.||+||| || +|||+||+|+||+++.+++++.
T Consensus 28 D~~~~~~~~~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~~lAGrl~~~~~~~~i~c~d~Gv~f~~a~~~~~l~~~~ 107 (432)
T PF02458_consen 28 DLQLMPPYYVPVLLFYRPPSSSDDSDIVDNLKESLSKTLVHYYPLAGRLRDPDGRLEIDCNDDGVEFVEAEADGTLDDLL 107 (432)
T ss_dssp HHHCCGCSEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHTTSGGGGSEEESSCTTTEEEECTTTEEEEEEEESS-HHHHC
T ss_pred hcCcccccEEEEEEEecCccccccchHHHHHHHHHHHhHhhCcccCcEEcccccceEEEEecCCCEEEEEecccceeecc
Confidence 54788999999999999886542 378999999 66 8999999999999999999999
Q ss_pred CCCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 58 DAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 58 ~~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
... ++......|+|..+...+..+.|++.||||+ |||++||+++||.++||.|+.+|+++||+++||.
T Consensus 108 ~~~-~~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~ 177 (432)
T PF02458_consen 108 DLE-PPSEFLRDLVPQLPVSSEGEDAPLLAVQVTRFKCGGLALGVSFHHAVADGTGFSQFLKAWAEICRGG 177 (432)
T ss_dssp SSS-CCGGGGGGGSSS-SSSEEETTEBSEEEEEEEETTTEEEEEEEEETTT--HHHHHHHHHHHHHHHHTT
T ss_pred ccc-cchHHHHHHhhhcccCCcccccceeEeeeeeecccceeeeeeceeccCcccchhHHHHHHHhhhcCC
Confidence 843 4545566788866544444458999999998 9999999999999999999999999999999984
These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Back Show alignment and domain information
Probab=99.95 E-value=2.3e-28 Score=196.39 Aligned_cols=124 Identities=34% Similarity=0.613 Sum_probs=101.5
Q ss_pred CCccccccccccEEEEecCCCCC--C--cccccccCc-----cc----------------ccCCCCcEEEEEEecCChhh
Q 047129 1 MDDQESLRFQIPGILFYKNNPSS--S--PTVQKEKIP-----LW----------------WIASEGILFLKAEANFKLEQ 55 (126)
Q Consensus 1 lddq~~~~~~v~~i~fY~~~~~~--~--~~~Lk~sLs-----fy----------------~c~~~Gv~f~ea~~~~~l~~ 55 (126)
||.+ .+.|++.+|||+.+... . .++||+||+ || +|||+||.|+||+++.++++
T Consensus 38 lD~~--~~~~~~~~~fy~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRL~~~~~g~~~i~c~~~Gv~fvea~~d~~l~~ 115 (436)
T PLN02481 38 LDQN--IAVIVRTVYCFKSEERGSNEDPVDVIKKALSKVLVHYYPLAGRLTISSEGKLIVDCTGEGVVFVEAEANCSIEE 115 (436)
T ss_pred cccC--cceeeeEEEEECCCCcccccCHHHHHHHHHHHHhccccCCCCeeeeCCCCcEEEEEcCCCeEEEEEEecCcHHH
Confidence 4654 34799999999976432 1 488999999 66 99999999999999999999
Q ss_pred hcCCCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 56 LGDAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 56 l~~~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
+.....+..+.+++|+|..+........|++.+|||+ |||++||+++||.++||.|+.+|+++||++|||+
T Consensus 116 l~~~~~p~~~~~~~l~~~~~~~~~~~~~Pll~vQvT~F~~GG~~lg~~~~H~v~Dg~g~~~fl~~WA~~~rg~ 188 (436)
T PLN02481 116 IGDITKPDPETLGKLVYDVPGAKNILEIPPLTAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGETARGL 188 (436)
T ss_pred hccccCCCCHHHHHhCCCCCCcccccccceeeeccceEecCcEEEEEEeccccccHHHHHHHHHHHHHHhcCC
Confidence 9763223345678888765433333457999999998 9999999999999999999999999999999984
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics
Back Show alignment and domain information
Probab=96.37 E-value=0.0088 Score=44.26 Aligned_cols=45 Identities=22% Similarity=0.410 Sum_probs=36.3
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcC
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWH 125 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg 125 (126)
...|++.+.+-+ .++..|.+.+||.++||.|...|++.+.+...|
T Consensus 112 ~~~pl~~~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~y~~ 158 (301)
T PF00668_consen 112 SEGPLFRFTLIRTSDDEYFLLISFHHIICDGWSLNILLRELLQAYAG 158 (301)
T ss_dssp CTSBSEEEEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHHHHHHH
T ss_pred cccchhhccccccccccchhcccccccccccccchhhhhhhHHhhhc
Confidence 345888888877 569999999999999999999999998876543
This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins
Back Show alignment and domain information
Probab=94.66 E-value=0.051 Score=41.21 Aligned_cols=115 Identities=14% Similarity=0.278 Sum_probs=62.4
Q ss_pred ccccccEEEEecCCCC---C-CcccccccCc--------cc----cc-CCCCcEEEEEEecCChhhhcCC--CCCC--ch
Q 047129 7 LRFQIPGILFYKNNPS---S-SPTVQKEKIP--------LW----WI-ASEGILFLKAEANFKLEQLGDA--VQPP--YP 65 (126)
Q Consensus 7 ~~~~v~~i~fY~~~~~---~-~~~~Lk~sLs--------fy----~c-~~~Gv~f~ea~~~~~l~~l~~~--~~~~--~~ 65 (126)
.+.++-.+++|..+.. . +.+.|++.+. |. .- -+-|-..=+...+.+++.=... +..| ..
T Consensus 16 ~pmhv~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~~~p~W~~d~~fDl~~Hv~~~~l~~pg~~~ 95 (263)
T PF03007_consen 16 NPMHVGALAIFDPPTDGAPPLDVERLRARLEARLARHPRFRQRVVRVPFGLGRPRWVEDPDFDLDYHVRRVALPAPGDRA 95 (263)
T ss_pred CCceEEEEEEEEcCCCCCCcchHHHHHHHHHHhhccCCccccceecCCCCCCCEEEEECCCCChHHceEEecCCCCCCHH
Confidence 3567888899987721 1 2234444333 22 11 1234433344444555543321 1111 23
Q ss_pred HHhhhhccCCCCCCCCCCCeeEEeEEe---cCeEEEEecccccccchhHHHHHHHHHHH
Q 047129 66 YLEQLLCNVPGSQGILGCPLLLIQVTR---CGGFILALRFNHTMCDAIGLVQFLKTIEE 121 (126)
Q Consensus 66 ~~~~l~~~~~~~~~~~~~pll~vQvT~---cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~ 121 (126)
.+.+++-......-..+.|+=.+-+-. .|+++|-+.+||+++||.+..+++..+..
T Consensus 96 ~l~~~v~~l~~~pLd~~rPlWe~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~l~~ 154 (263)
T PF03007_consen 96 ELQALVSRLASTPLDRSRPLWEVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAALLD 154 (263)
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHHHhC
Confidence 444444332111111235665555544 67799999999999999999999987654
O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
>PRK09294 acyltransferase PapA5; Provisional
Back Show alignment and domain information
Probab=94.61 E-value=0.063 Score=42.86 Aligned_cols=41 Identities=27% Similarity=0.345 Sum_probs=35.2
Q ss_pred CeeEEeEEe-cCeEEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 84 PLLLIQVTR-CGGFILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 84 pll~vQvT~-cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
|++.+.+.. +++..|.+.+||.++||.|+..|++.+.....
T Consensus 98 ~l~~~~~~~~~~~~~l~l~~hH~i~DG~S~~~ll~el~~~Y~ 139 (416)
T PRK09294 98 SLLALDVVPDDGGARVTLYIHHSIADAHHSASLLDELWSRYT 139 (416)
T ss_pred ceEEEEEEEcCCCEEEEEEeccEeEccccHHHHHHHHHHHHH
Confidence 477777766 78899999999999999999999999987653
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Back Show alignment and domain information
Probab=94.58 E-value=0.061 Score=43.61 Aligned_cols=55 Identities=18% Similarity=0.382 Sum_probs=42.8
Q ss_pred HhhhhccCCCCCCCCCCCeeEEeEEe-cCeEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 67 LEQLLCNVPGSQGILGCPLLLIQVTR-CGGFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 67 ~~~l~~~~~~~~~~~~~pll~vQvT~-cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+.+++-..... +...|...+-+++ |-|=.|.+.+||+++||.|+.+.+...+++-
T Consensus 98 fs~Fi~~k~~~--t~~~PqI~v~~~r~~~~d~L~i~lhH~~~DgrG~leyL~ll~~~Y 153 (439)
T COG4908 98 FSRFIVRKLNI--TKESPQIKVFVVRQTVGDTLVINLHHAVCDGRGFLEYLYLLARLY 153 (439)
T ss_pred HHHHHhccccc--ccCCCeEEEeeehhccCcEEEEEechhhhcchhHHHHHHHHHHHH
Confidence 44555443321 2447888888899 9999999999999999999999998888764
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT
Back Show alignment and domain information
Probab=92.37 E-value=0.17 Score=40.61 Aligned_cols=39 Identities=18% Similarity=0.428 Sum_probs=33.4
Q ss_pred CCeeEEeEEe---cCeEEEEecccccccchhHHHHHHHHHHH
Q 047129 83 CPLLLIQVTR---CGGFILALRFNHTMCDAIGLVQFLKTIEE 121 (126)
Q Consensus 83 ~pll~vQvT~---cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~ 121 (126)
.|+..+.+.+ .|+.++-+.+||.++||.|...|++.+.+
T Consensus 107 ~Pl~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~ 148 (446)
T TIGR02946 107 RPLWEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLD 148 (446)
T ss_pred CCCeEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcC
Confidence 3888887766 57899999999999999999999987765
This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2
Back Show alignment and domain information
Probab=89.35 E-value=0.49 Score=35.44 Aligned_cols=29 Identities=31% Similarity=0.476 Sum_probs=24.6
Q ss_pred eEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 95 GFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 95 G~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-+-+++++.|.+.||.-+..|++.+.+..
T Consensus 195 ~~~lslt~DHRvidG~~aa~Fl~~l~~~l 223 (231)
T PF00198_consen 195 VMNLSLTFDHRVIDGAEAARFLKDLKELL 223 (231)
T ss_dssp EEEEEEEEETTTS-HHHHHHHHHHHHHHH
T ss_pred EEEeEEeccceEEcHHHHHHHHHHHHHHH
Confidence 35678999999999999999999998764
3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
>PRK10252 entF enterobactin synthase subunit F; Provisional
Back Show alignment and domain information
Probab=89.25 E-value=0.56 Score=42.39 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=36.7
Q ss_pred CCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 83 CPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 83 ~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
.|++++.+.+ -+...+-+++||.++||.|...+++.+++..+
T Consensus 118 ~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~ 161 (1296)
T PRK10252 118 KPLVFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYC 161 (1296)
T ss_pred CCCeEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHH
Confidence 4899999888 67889999999999999999999998877643
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Back Show alignment and domain information
Probab=88.62 E-value=0.46 Score=38.36 Aligned_cols=28 Identities=32% Similarity=0.552 Sum_probs=25.5
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.++||.-+.+|++.+.+..
T Consensus 375 m~lslt~DHRviDG~~aa~Fl~~l~~~l 402 (411)
T PRK11856 375 MPLSLSFDHRVIDGADAARFLKALKELL 402 (411)
T ss_pred EEEeEEeehhhcCcHHHHHHHHHHHHHH
Confidence 6799999999999999999999998753
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2
Back Show alignment and domain information
Probab=88.55 E-value=1.5 Score=35.60 Aligned_cols=40 Identities=20% Similarity=0.230 Sum_probs=30.3
Q ss_pred CCeeEEeEEe----cCeEEEEecccccccchhHHHHHHHHHHHH
Q 047129 83 CPLLLIQVTR----CGGFILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 83 ~pll~vQvT~----cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
.|+-.+-|-. .+..-|.+.+||+++||.|+..|.++.-+.
T Consensus 124 ~P~Wrl~vl~~~~~~~~~~i~f~~~H~i~DG~Sg~~Fh~~ll~~ 167 (480)
T PF07247_consen 124 KPLWRLIVLPNEDDESFQFIVFVFHHAIFDGMSGKIFHEDLLEA 167 (480)
T ss_pred CCCeEEEEECCCCCCcceEEEEEecccccccHHHHHHHHHHHHH
Confidence 3666655544 346788999999999999999998876543
3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Back Show alignment and domain information
Probab=88.20 E-value=0.51 Score=36.90 Aligned_cols=28 Identities=18% Similarity=0.267 Sum_probs=24.9
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|++++.|.+.||..+.+|++.|.+.-
T Consensus 270 m~lslt~DHRviDGa~aa~Fl~~lk~~L 297 (306)
T PRK11857 270 MHLTVAADHRWIDGATIGRFASRVKELL 297 (306)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHh
Confidence 3488899999999999999999998764
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2
Back Show alignment and domain information
Probab=88.07 E-value=1.1 Score=33.05 Aligned_cols=38 Identities=16% Similarity=0.360 Sum_probs=25.8
Q ss_pred CCCeeEE-eEEe-cCe--EEEEecccccccchhHHHHHHHHH
Q 047129 82 GCPLLLI-QVTR-CGG--FILALRFNHTMCDAIGLVQFLKTI 119 (126)
Q Consensus 82 ~~pll~v-QvT~-cGG--~~lg~~~~H~v~Dg~~~~~Fl~~W 119 (126)
..|.++. |.+. .|- +-|++..||+++||.=+.+|++..
T Consensus 164 ~~P~it~GK~~~~~gr~~mPvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 164 SIPRITWGKYFEENGRLLMPVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp SS-EEEEE--EEETTEEEEEEEEEEETTT--HHHHHHHHHHH
T ss_pred cccEEEeeeeEeECCEEEEEEEEEEecccccHHHHHHHHHHh
Confidence 3577665 5666 444 889999999999999999998753
3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
Back Show alignment and domain information
Probab=87.95 E-value=0.52 Score=38.58 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=25.1
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|++++.|.+.||..+.+|++.|.+.-
T Consensus 400 m~lsls~DHRviDGa~aa~Fl~~lk~~l 427 (435)
T TIGR01349 400 MSVTLSCDHRVIDGAVGAEFLKSFKKYL 427 (435)
T ss_pred EEEeEeecchhhCcHHHHHHHHHHHHHH
Confidence 4589999999999999999999998763
This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Back Show alignment and domain information
Probab=87.78 E-value=0.58 Score=38.11 Aligned_cols=28 Identities=11% Similarity=0.236 Sum_probs=24.9
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|++++.|.|.||.-+.+||+.|.+.-
T Consensus 378 m~lslt~DHRviDGa~aa~Fl~~lk~~l 405 (416)
T PLN02528 378 MTVTIGADHRVLDGATVARFCNEWKSYV 405 (416)
T ss_pred EEEeEeccchhcCcHHHHHHHHHHHHHH
Confidence 4489999999999999999999998753
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Back Show alignment and domain information
Probab=86.79 E-value=0.72 Score=37.68 Aligned_cols=27 Identities=37% Similarity=0.630 Sum_probs=24.8
Q ss_pred EEEEecccccccchhHHHHHHHHHHHH
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
+-|++++.|.+.||..+.+|++.|.+.
T Consensus 381 m~lsLs~DHRviDGa~AA~FL~~lk~~ 407 (418)
T PTZ00144 381 MYLALTYDHRLIDGRDAVTFLKKIKDL 407 (418)
T ss_pred EEEEEecchhhhChHHHHHHHHHHHHH
Confidence 568999999999999999999999875
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Back Show alignment and domain information
Probab=86.30 E-value=0.75 Score=36.61 Aligned_cols=27 Identities=26% Similarity=0.476 Sum_probs=24.3
Q ss_pred EEEecccccccchhHHHHHHHHHHHHh
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-|.+++.|.+.||..+.+|++.|.+.-
T Consensus 313 ~lsls~DHRviDGa~aa~Fl~~lk~~l 339 (347)
T PRK14843 313 SLGLTIDHRVVDGMAGAKFMKDLKELI 339 (347)
T ss_pred EEEEecchhhhCcHHHHHHHHHHHHHh
Confidence 478999999999999999999998753
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Back Show alignment and domain information
Probab=86.02 E-value=0.78 Score=38.54 Aligned_cols=28 Identities=18% Similarity=0.376 Sum_probs=25.0
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.|.+..
T Consensus 512 m~lslt~DHRviDG~~aa~Fl~~l~~~l 539 (547)
T PRK11855 512 LPLSLSYDHRVIDGATAARFTNYLKQLL 539 (547)
T ss_pred EEEeEEccchhcCcHHHHHHHHHHHHHH
Confidence 5589999999999999999999998753
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Back Show alignment and domain information
Probab=85.92 E-value=0.83 Score=37.12 Aligned_cols=27 Identities=41% Similarity=0.540 Sum_probs=24.4
Q ss_pred EEEecccccccchhHHHHHHHHHHHHh
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-|++++.|.+.||..+.+||+.|.+.-
T Consensus 371 ~lsls~DHRviDGa~aa~Fl~~l~~~l 397 (407)
T PRK05704 371 YLALSYDHRIIDGKEAVGFLVTIKELL 397 (407)
T ss_pred EEEEEechhhhCcHHHHHHHHHHHHHh
Confidence 388999999999999999999998753
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
Back Show alignment and domain information
Probab=85.82 E-value=0.89 Score=36.91 Aligned_cols=27 Identities=41% Similarity=0.556 Sum_probs=24.6
Q ss_pred EEEecccccccchhHHHHHHHHHHHHh
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-|++++.|.+.||..+.+||+.|.+.-
T Consensus 367 ~lsLt~DHRviDGa~aa~Fl~~l~~~l 393 (403)
T TIGR01347 367 YLALSYDHRLIDGKEAVTFLVTIKELL 393 (403)
T ss_pred EEEEEecchhhChHHHHHHHHHHHHHh
Confidence 489999999999999999999998763
dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
>PRK13757 chloramphenicol acetyltransferase; Provisional
Back Show alignment and domain information
Probab=85.74 E-value=1 Score=33.58 Aligned_cols=41 Identities=17% Similarity=0.427 Sum_probs=30.4
Q ss_pred CCeeEE-eEEe-cCe--EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 83 CPLLLI-QVTR-CGG--FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 83 ~pll~v-QvT~-cGG--~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
.|.++. +... .|. +.|++..||+++||.=..+|+....+..
T Consensus 168 ~P~it~GKy~~~~gr~~mPvSvqvHHa~~DG~Hv~~F~~~lQ~~~ 212 (219)
T PRK13757 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYC 212 (219)
T ss_pred CcEEEeeceEEECCEEEEEEEEEEehhccchHHHHHHHHHHHHHH
Confidence 355543 4444 454 7888899999999999999998877653
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Back Show alignment and domain information
Probab=85.35 E-value=0.89 Score=37.65 Aligned_cols=28 Identities=25% Similarity=0.509 Sum_probs=25.3
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.+++.|.+.||..+.+|++.|.+.-
T Consensus 426 m~lsLs~DHRVIDGa~aA~FL~~lk~~L 453 (463)
T PLN02226 426 MYVALTYDHRLIDGREAVYFLRRVKDVV 453 (463)
T ss_pred EEEeEecchhhhCcHHHHHHHHHHHHHh
Confidence 5688999999999999999999998753
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Back Show alignment and domain information
Probab=84.66 E-value=1 Score=38.61 Aligned_cols=28 Identities=25% Similarity=0.513 Sum_probs=24.8
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|+++++|.+.||.-+.+|++.|.+.-
T Consensus 598 m~lslt~DHRviDGa~aa~Fl~~lk~~L 625 (633)
T PRK11854 598 LPLSLSYDHRVIDGADGARFITIINDRL 625 (633)
T ss_pred EEEeEEccchhcchHHHHHHHHHHHHHH
Confidence 3488999999999999999999998753
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
Back Show alignment and domain information
Probab=84.33 E-value=1 Score=38.32 Aligned_cols=26 Identities=35% Similarity=0.624 Sum_probs=24.0
Q ss_pred EEecccccccchhHHHHHHHHHHHHh
Q 047129 98 LALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 98 lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
|.+++.|.|.||..+.+||+.|.+.-
T Consensus 554 lsls~DHRviDGa~aa~Fl~~lk~~L 579 (590)
T TIGR02927 554 LPLTYDHQLIDGADAGRFLTTIKDRL 579 (590)
T ss_pred EeeeccchhcCcHHHHHHHHHHHHHH
Confidence 89999999999999999999998753
This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Back Show alignment and domain information
Probab=83.78 E-value=1.1 Score=37.87 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=24.5
Q ss_pred EEEEecccccccchhHHHHHHHHHHHH
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
+-|++++.|.|.||..+.+||+.|.+.
T Consensus 504 m~lsLs~DHRvIDGa~AA~FL~~lk~~ 530 (539)
T PLN02744 504 MSVTLSCDHRVIDGAIGAEWLKAFKGY 530 (539)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHH
Confidence 458899999999999999999999875
>PRK12467 peptide synthase; Provisional
Back Show alignment and domain information
Probab=83.57 E-value=2.2 Score=43.53 Aligned_cols=45 Identities=24% Similarity=0.318 Sum_probs=38.8
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcC
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWH 125 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg 125 (126)
...|++++.+-+ .+...+-+++||.++||.|..-+++.+.+..+|
T Consensus 2754 ~~~pl~R~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~~ 2800 (3956)
T PRK12467 2754 LSAPLLRLTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYFG 2800 (3956)
T ss_pred CCCcceEEEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhcC
Confidence 457899888887 678889999999999999999999999887654
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
Back Show alignment and domain information
Probab=83.56 E-value=1.2 Score=37.45 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=24.3
Q ss_pred EEEecccccccchhHHHHHHHHHHHHh
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-|.+++.|.|.||.-+.+||+.|.+.-
T Consensus 512 ~ltls~DHRviDGa~aa~Fl~~~~~~l 538 (546)
T TIGR01348 512 PLSLSYDHRVIDGADAARFTTYICESL 538 (546)
T ss_pred EEeEeccchhcChHHHHHHHHHHHHHH
Confidence 378999999999999999999998753
This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Homologous Structure Domains
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability
Query 126
d1l5aa1 174
VibH {Vibrio cholerae [TaxId: 666]}
96.62
d1q9ja1 175
Polyketide synthase associated protein 5, PapA5 {M
96.25
d1q23a_ 214
Chloramphenicol acetyltransferase, CAT {Escherichi
92.51
d1b5sa_ 242
Dihydrolipoamide acetyltransferase {Bacillus stear
92.36
d3claa_ 213
Chloramphenicol acetyltransferase, CAT {Escherichi
92.33
d1scza_ 233
Dihydrolipoamide succinyltransferase {Escherichia
92.24
d1dpba_ 243
Dihydrolipoamide acetyltransferase {Azotobacter vi
91.77
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]}
Back Hide information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: VibH
species: Vibrio cholerae [TaxId: 666]
Probab=96.62 E-value=0.0018 Score=42.75 Aligned_cols=43 Identities=21% Similarity=0.384 Sum_probs=36.7
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
...|++.+.+-+ .|...+.+++||.++||.|...|++.+++.-
T Consensus 101 ~~~pl~r~~l~~~~~~~~~l~~~~hHii~Dg~S~~~l~~el~~~Y 145 (174)
T d1l5aa1 101 IDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHY 145 (174)
T ss_dssp BTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEEeCCCceEEeeecccEEEcHhHHHHHHHHHHHHH
Confidence 456888888776 7888899999999999999999999887653
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.25 E-value=0.0034 Score=41.30 Aligned_cols=41 Identities=27% Similarity=0.332 Sum_probs=33.9
Q ss_pred CCCeeEEeEEe-cCeEEEEecccccccchhHHHHHHHHHHHH
Q 047129 82 GCPLLLIQVTR-CGGFILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 82 ~~pll~vQvT~-cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
+.|+..+.+.. .++..+.+++||.++||.|...|++.+...
T Consensus 101 ~~~l~~~~i~~~~~~~~l~l~~HH~i~Dg~S~~~ll~el~~~ 142 (175)
T d1q9ja1 101 SVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSR 142 (175)
T ss_dssp TTCSEEEEEECCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEecCCeEEEEEEccccccCHhHHHHHHHHHHHH
Confidence 45666777766 788889999999999999999999887653
>d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: CAT-like
domain: Chloramphenicol acetyltransferase, CAT
species: Escherichia coli [TaxId: 562]
Probab=92.51 E-value=0.049 Score=37.43 Aligned_cols=41 Identities=17% Similarity=0.415 Sum_probs=31.8
Q ss_pred CCeeEE-eEEe-cCeE--EEEecccccccchhHHHHHHHHHHHHh
Q 047129 83 CPLLLI-QVTR-CGGF--ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 83 ~pll~v-QvT~-cGG~--~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
.|.+.+ |++. .|.. -|.++++|.++||.-+.+|++.+.+..
T Consensus 164 vpii~~Gk~~~~~~r~~mplsls~dHrvvDG~~~a~Fl~~lq~~l 208 (214)
T d1q23a_ 164 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYC 208 (214)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eeEEEecceEEECCEEEEEEEEEecccccchHHHHHHHHHHHHHH
Confidence 455554 5555 5544 588999999999999999999998764
>d1b5sa_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: CAT-like
domain: Dihydrolipoamide acetyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.36 E-value=0.047 Score=38.31 Aligned_cols=28 Identities=29% Similarity=0.403 Sum_probs=25.2
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+.|++++.|.+.||.-+.+|++.|.+.-
T Consensus 207 m~lslt~DHRviDGa~aa~Fl~~l~~~l 234 (242)
T d1b5sa_ 207 LALSLSFDHRMIDGATAQKALNHIKRLL 234 (242)
T ss_dssp EEEEEEECTTTSCSHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcchhChHHHHHHHHHHHHHH
Confidence 4589999999999999999999998763
>d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: CAT-like
domain: Chloramphenicol acetyltransferase, CAT
species: Escherichia coli [TaxId: 562]
Probab=92.33 E-value=0.064 Score=36.68 Aligned_cols=29 Identities=21% Similarity=0.547 Sum_probs=26.1
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
+-|.++++|.+.||.-+.+|++.+.++.-
T Consensus 181 m~lsls~dHrviDG~~aa~Fl~~lk~~le 209 (213)
T d3claa_ 181 LPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEecccccccHHHHHHHHHHHHHHh
Confidence 56899999999999999999999988754
>d1scza_ c.43.1.1 (A:) Dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: CAT-like
domain: Dihydrolipoamide succinyltransferase
species: Escherichia coli [TaxId: 562]
Probab=92.24 E-value=0.055 Score=37.87 Aligned_cols=28 Identities=39% Similarity=0.529 Sum_probs=25.3
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+.|++++.|.+.||..+.+|++.|.+.-
T Consensus 196 ~~lsls~DHRviDGa~aa~Fl~~l~~~l 223 (233)
T d1scza_ 196 MYLALSYDHRLIDGRESVGFLVTIKELL 223 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEhhcchhccHHHHHHHHHHHHHH
Confidence 5689999999999999999999998753
>d1dpba_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: CAT-like
domain: Dihydrolipoamide acetyltransferase
species: Azotobacter vinelandii [TaxId: 354]
Probab=91.77 E-value=0.066 Score=37.59 Aligned_cols=26 Identities=15% Similarity=0.348 Sum_probs=24.1
Q ss_pred EEecccccccchhHHHHHHHHHHHHh
Q 047129 98 LALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 98 lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
|++++.|.+.||..+..|++.|.+.-
T Consensus 210 ltls~DHRvidGa~aa~FL~~l~~~l 235 (243)
T d1dpba_ 210 LSLSYDCRVINGAAAARFTKRLGDLL 235 (243)
T ss_dssp EEEEEETTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEeecccccHHHHHHHHHHHHHHH
Confidence 79999999999999999999998763