Citrus Sinensis ID: 047150

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-----
Protein Sequence
MCLDLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHEEEEEEcccccEEEEEEEEEEEEEEccccccccccccEEEEEEEEEEEEEccccEEEEEEcccEEEEEEccEEEEEcccccEEEEccccEEEEEEEEEEEEEccccccccHHHHHccccEEEEEEEEEEEEEEEEEEEEccEEEEEEEEEEEEccccccccccEEEccEEEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEccccccccccccEEEEEEEEEEEEEccccEEEEEEccccEEEEEccEEEEcccccccEccccccEEEEEEEEEcEccEccccccHccccccccccEEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEccccccccEEEEcccEEEEEc
Coil and Loop (DISEMBL)
MCLDLFANKLETFAEFGSCIacffmaskpppplisikiagirqfglgegvdstgVATKILTSNcsvdllvdnksklfglhisppvidmsfgrlpiasshgpklyaashdssLFRLYvgtrnkpmygagrNMQDLLelgkglplIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRkydkkhrtqvynstcitis
Flexible Loop (DISEMBL)
MCLDLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLnrkydkkhrtqvynstcitis
Low Complexity Region (SEG)
MCLDLFANKLETFAEFGSCIACFFMASKppppLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS
Disordered region (IsUnstruct)
*CLDLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCIT**
Disordered Region (DISOPRED)
MCLDLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHG**********SLFRLYVGTRNKPMY***************LPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLL**************STCITI*
Disordered Region (DISEMBL)
MCLDLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS
Disordered Region (DISPRO)
MCLDLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCLDLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	195
225450131	354	PREDICTED: uncharacterized protein LOC10	0.923	0.508	0.677	2e-70
297736245	335	unnamed protein product [Vitis vinifera]	0.923	0.537	0.677	3e-70
224059632	294	predicted protein [Populus trichocarpa]	0.887	0.588	0.702	1e-69
118481171	342	unknown [Populus trichocarpa]	0.887	0.505	0.702	2e-69
224104067	141	predicted protein [Populus trichocarpa]	0.723	1.0	0.709	2e-56
356555315	358	PREDICTED: uncharacterized protein LOC10	0.917	0.5	0.544	6e-54
449463787	347	PREDICTED: uncharacterized protein LOC10	0.969	0.544	0.538	9e-54
357458341	350	hypothetical protein MTR_3g033530 [Medic	0.917	0.511	0.533	1e-51
15231920	271	uncharacterized protein [Arabidopsis tha	0.871	0.627	0.523	6e-46
115451567	350	Os03g0216500 [Oryza sativa Japonica Grou	0.882	0.491	0.423	4e-36

>gi|225450131|ref|XP_002275403.1| PREDICTED: uncharacterized protein LOC100261971 [Vitis vinifera]

 Score =  270 bits (690), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 122/180 (67%), Positives = 150/180 (83%)

Query: 16  FGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSK 75
            G+ +  F +A+KPPPP++SIK+ GIRQFGLGEGVD++GV TKILT NCS+ L+VDNKSK
Sbjct: 175 LGAALLVFCIATKPPPPMMSIKMTGIRQFGLGEGVDASGVTTKILTCNCSMALMVDNKSK 234

Query: 76  LFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLL 135
           LFGLHI PP++++SF   P A+SHG +LYA SH SS F+LYVGTRNKPMYGAGR MQD+L
Sbjct: 235 LFGLHIHPPLVEISFDHHPFATSHGQELYAPSHGSSKFQLYVGTRNKPMYGAGRAMQDML 294

Query: 136 ELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS 195
           E G+GLPL IR+S ++++RVVW LI P+FHH+AECLL LNR YDK+H TQVYNSTC   S
Sbjct: 295 ETGEGLPLAIRVSLKSSFRVVWSLIVPKFHHQAECLLFLNRAYDKRHGTQVYNSTCTVTS 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736245|emb|CBI24883.3| unnamed protein product [Vitis vinifera]

 Score =  270 bits (689), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 122/180 (67%), Positives = 150/180 (83%)

Query: 16  FGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSK 75
            G+ +  F +A+KPPPP++SIK+ GIRQFGLGEGVD++GV TKILT NCS+ L+VDNKSK
Sbjct: 156 LGAALLVFCIATKPPPPMMSIKMTGIRQFGLGEGVDASGVTTKILTCNCSMALMVDNKSK 215

Query: 76  LFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLL 135
           LFGLHI PP++++SF   P A+SHG +LYA SH SS F+LYVGTRNKPMYGAGR MQD+L
Sbjct: 216 LFGLHIHPPLVEISFDHHPFATSHGQELYAPSHGSSKFQLYVGTRNKPMYGAGRAMQDML 275

Query: 136 ELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS 195
           E G+GLPL IR+S ++++RVVW LI P+FHH+AECLL LNR YDK+H TQVYNSTC   S
Sbjct: 276 ETGEGLPLAIRVSLKSSFRVVWSLIVPKFHHQAECLLFLNRAYDKRHGTQVYNSTCTVTS 335

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059632|ref|XP_002299943.1| predicted protein [Populus trichocarpa] gi|222847201|gb|EEE84748.1| predicted protein [Populus trichocarpa]

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 123/175 (70%), Positives = 145/175 (82%), Gaps = 2/175 (1%)

Query: 19  CIA--CFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKL 76
           C+A   F+ A+KPPPP  SIKIAGIR FGL EGVD +GV TKIL  NCS+DLL++NKSKL
Sbjct: 117 CVALLVFYAATKPPPPKTSIKIAGIRLFGLAEGVDGSGVTTKILNCNCSIDLLIENKSKL 176

Query: 77  FGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLE 136
           FGLHI PPV++MSFG L  A+S G KLYA SH S+LF+L+VGTRNKPMYGAG NMQD+LE
Sbjct: 177 FGLHIQPPVLEMSFGHLTFATSRGSKLYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLE 236

Query: 137 LGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTC 191
              GLP++IR+S R+N+RVVW+LIKP FHH A CLL+L+  YDKKHRTQVYNSTC
Sbjct: 237 SENGLPIVIRVSLRSNFRVVWNLIKPAFHHRAVCLLVLDGAYDKKHRTQVYNSTC 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481171|gb|ABK92537.1| unknown [Populus trichocarpa]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 123/175 (70%), Positives = 145/175 (82%), Gaps = 2/175 (1%)

Query: 19  CIA--CFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKL 76
           C+A   F+ A+KPPPP  SIKIAGIR FGL EGVD +GV TKIL  NCS+DLL++NKSKL
Sbjct: 165 CVALLVFYAATKPPPPKTSIKIAGIRLFGLAEGVDGSGVTTKILNCNCSIDLLIENKSKL 224

Query: 77  FGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLE 136
           FGLHI PPV++MSFG L  A+S G KLYA SH S+LF+L+VGTRNKPMYGAG NMQD+LE
Sbjct: 225 FGLHIQPPVLEMSFGHLTFATSRGSKLYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLE 284

Query: 137 LGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTC 191
              GLP++IR+S R+N+RVVW+LIKP FHH A CLL+L+  YDKKHRTQVYNSTC
Sbjct: 285 SENGLPIVIRVSLRSNFRVVWNLIKPAFHHRAVCLLVLDGAYDKKHRTQVYNSTC 339

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104067|ref|XP_002313304.1| predicted protein [Populus trichocarpa] gi|222849712|gb|EEE87259.1| predicted protein [Populus trichocarpa]

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 100/141 (70%), Positives = 124/141 (87%)

Query: 34  ISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRL 93
           +SIK+AGIRQFGLGEGVD +GV TKILT NCS+DLL++NKSK+FGLH+ PP+++MSFG L
Sbjct: 1   MSIKMAGIRQFGLGEGVDGSGVTTKILTCNCSIDLLIENKSKIFGLHVQPPILEMSFGHL 60

Query: 94  PIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNY 153
             A S G KLYA SH S+LF+L VGTRNKPMYGAGRNMQD+LE G GLP++I++S R+N+
Sbjct: 61  RFAMSRGSKLYAQSHTSTLFQLSVGTRNKPMYGAGRNMQDMLESGNGLPIVIQLSLRSNF 120

Query: 154 RVVWDLIKPEFHHEAECLLLL 174
           RVVW+LIKP+FHH+A CLL+L
Sbjct: 121 RVVWNLIKPKFHHQALCLLVL 141

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555315|ref|XP_003545979.1| PREDICTED: uncharacterized protein LOC100792233 [Glycine max]

 Score =  215 bits (548), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 134/180 (74%), Gaps = 1/180 (0%)

Query: 16  FGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSK 75
           FG  +  F++A+KPPPP +S++IA   +F L EG+D +GV TKILT NCS++L+++NKS+
Sbjct: 180 FGIALLVFYIATKPPPPNVSVEIARFPEFKLAEGIDRSGVTTKILTCNCSLNLIIENKSR 239

Query: 76  LFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLL 135
            FGLHI PP +DM F  LP A S+ P+LYA S   ++F L +G +NKPMYGAGR+MQD+L
Sbjct: 240 FFGLHIRPPTMDMKFSNLPFAFSNAPELYAES-GITIFALQLGAKNKPMYGAGRSMQDML 298

Query: 136 ELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS 195
           + G GLPL+IR+   ++++VV  LIKP FHH AECL+ L + YDKKHRT  ++STC   S
Sbjct: 299 DSGTGLPLVIRVILSSSFKVVPSLIKPRFHHHAECLVFLKKAYDKKHRTLAFDSTCKVTS 358

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463787|ref|XP_004149613.1| PREDICTED: uncharacterized protein LOC101209149 [Cucumis sativus] gi|449518423|ref|XP_004166241.1| PREDICTED: uncharacterized LOC101209149 [Cucumis sativus]

 Score =  215 bits (547), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 104/193 (53%), Positives = 133/193 (68%), Gaps = 4/193 (2%)

Query: 1   MCLDLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKIL 60
           +CL L           G  +  F++ + PP P+I++K+  I +F LGEGVD TGV TKIL
Sbjct: 158 ICLQL---SWRAIFSMGIALLVFYIVTNPPSPIITVKVGEIEEFMLGEGVDKTGVGTKIL 214

Query: 61  TSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTR 120
           T NC++D++VDN SKLFGLHI PP + MSFG LPIA+S GP+LYA S   + FRL VGT 
Sbjct: 215 TCNCTMDVIVDNHSKLFGLHILPPSLHMSFGPLPIAASQGPRLYAES-GRTRFRLSVGTS 273

Query: 121 NKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDK 180
           NK MYGAGR+M+D L+ G GL L IR++F +NYRVVW  I P FH   +CLLLL + YD+
Sbjct: 274 NKAMYGAGRDMEDKLDSGIGLELTIRLNFISNYRVVWKFISPHFHRHVQCLLLLRKPYDR 333

Query: 181 KHRTQVYNSTCIT 193
              T+ +NSTC T
Sbjct: 334 NPHTRSFNSTCFT 346

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357458341|ref|XP_003599451.1| hypothetical protein MTR_3g033530 [Medicago truncatula] gi|355488499|gb|AES69702.1| hypothetical protein MTR_3g033530 [Medicago truncatula]

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 136/180 (75%), Gaps = 1/180 (0%)

Query: 16  FGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSK 75
           FG  +  F++A+KPP P IS +IA I +F LGEGVD TGV TKILT NCS++L+V+NKS+
Sbjct: 172 FGFALLVFYIATKPPTPKISFEIARIPEFKLGEGVDRTGVTTKILTCNCSMNLIVENKSR 231

Query: 76  LFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLL 135
            FGLHI PP +DM F  LP A S+GP+LYA S   ++F L +  +NKPMYGAGR+M+D+L
Sbjct: 232 FFGLHIRPPKMDMKFSILPFAFSNGPELYAES-GLTVFPLQLEVKNKPMYGAGRSMEDML 290

Query: 136 ELGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS 195
           + G+GLP++I+++  +++ VV  L+KP+FHH  EC+++L + Y+KKH +Q +NSTC   S
Sbjct: 291 DSGRGLPILIQVTLSSSFEVVPALVKPKFHHRVECIVVLKKTYNKKHHSQAFNSTCKVTS 350

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231920|ref|NP_187462.1| uncharacterized protein [Arabidopsis thaliana] gi|12321556|gb|AAG50832.1|AC074395_6 hypothetical protein [Arabidopsis thaliana] gi|49660145|gb|AAT68363.1| hypothetical protein At3g08490 [Arabidopsis thaliana] gi|50058945|gb|AAT69217.1| hypothetical protein At3g08490 [Arabidopsis thaliana] gi|332641115|gb|AEE74636.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 89/170 (52%), Positives = 115/170 (67%)

Query: 17  GSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKL 76
           G  +  F++A++PP P IS +I    QF L EGVDS GV+TK LT NCS  L++DNKS +
Sbjct: 94  GVALLVFYIATQPPHPNISFRIGRFNQFMLEEGVDSHGVSTKFLTFNCSTKLIIDNKSNV 153

Query: 77  FGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLE 136
           FGLHI PP I   FG L  A + GPKLY  SH+S+ F+LY+ T N+ MYGAG  M D+L 
Sbjct: 154 FGLHIHPPSIKFFFGPLNFAKAQGPKLYGLSHESTTFQLYIATTNRAMYGAGTEMNDMLL 213

Query: 137 LGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQV 186
              GLPLI+R S  ++YRVVW++I P++HH+ ECLLLL  K    H T +
Sbjct: 214 SRAGLPLILRTSIISDYRVVWNIINPKYHHKVECLLLLADKERHSHVTMI 263

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115451567|ref|NP_001049384.1| Os03g0216500 [Oryza sativa Japonica Group] gi|108706852|gb|ABF94647.1| expressed protein [Oryza sativa Japonica Group] gi|113547855|dbj|BAF11298.1| Os03g0216500 [Oryza sativa Japonica Group] gi|125585404|gb|EAZ26068.1| hypothetical protein OsJ_09921 [Oryza sativa Japonica Group]

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 108/177 (61%), Gaps = 5/177 (2%)

Query: 23  FFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHIS 82
           FF+A+KP  P ++ K+  I+QF LGEG+D +GV T  L+ N +V + VDN S++F LH+ 
Sbjct: 173 FFVATKPRDPGVTFKVGKIQQFSLGEGLDGSGVITSFLSCNLTVAMAVDNHSRVFTLHVR 232

Query: 83  PPVIDMSFGRLPIASSHGPKLYAASHD-----SSLFRLYVGTRNKPMYGAGRNMQDLLEL 137
           PP +DMSFGR   A+S G +   +S+D         RL+V    KPMY AGR MQDLLE 
Sbjct: 233 PPRLDMSFGRFTFATSQGVEEEGSSYDVGARGKRTVRLFVAAEGKPMYAAGRGMQDLLES 292

Query: 138 GKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITI 194
           G GLPL + +  R+ YR+V  L++  + H+A+C++ L R   + +       TC  I
Sbjct: 293 GGGLPLAVTVRARSRYRMVGSLVRLSYRHDAQCVVRLRRTPRRNNAIDASGYTCSAI 349

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	195
TAIR|locus:2103454	271	AT3G08490 "AT3G08490" [Arabido	0.912	0.656	0.491	6.6e-42
TAIR|locus:2825837	342	AT1G45688 "AT1G45688" [Arabido	0.610	0.347	0.268	2.3e-11
TAIR|locus:2160026	320	AT5G42860 "AT5G42860" [Arabido	0.553	0.337	0.277	2e-10
TAIR|locus:2132811	299	AT4G35170 "AT4G35170" [Arabido	0.938	0.612	0.244	2.2e-05

TAIR|locus:2103454 AT3G08490 "AT3G08490" [Arabidopsis thaliana (taxid:3702)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 88/179 (49%), Positives = 115/179 (64%)

Query:    17 GSCIACFFMASKXXXXLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKL 76
             G  +  F++A++     IS +I    QF L EGVDS GV+TK LT NCS  L++DNKS +
Sbjct:    94 GVALLVFYIATQPPHPNISFRIGRFNQFMLEEGVDSHGVSTKFLTFNCSTKLIIDNKSNV 153

Query:    77 FGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLE 136
             FGLHI PP I   FG L  A + GPKLY  SH+S+ F+LY+ T N+ MYGAG  M D+L 
Sbjct:   154 FGLHIHPPSIKFFFGPLNFAKAQGPKLYGLSHESTTFQLYIATTNRAMYGAGTEMNDMLL 213

Query:   137 LGKGLPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYDKKHRTQVYNSTCITIS 195
                GLPLI+R S  ++YRVVW++I P++HH+ ECLLLL  K    H T +    C  +S
Sbjct:   214 SRAGLPLILRTSIISDYRVVWNIINPKYHHKVECLLLLADKERHSHVTMI-REKCRLVS 271

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2825837 AT1G45688 "AT1G45688" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
 Identities = 32/119 (26%), Positives = 54/119 (45%)

Query:    13 FAEFGSCIACFFMASKXXXXLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDN 72
             F  FG      + A+K     I++K        +  G D+ GV T ++T N ++ +L  N
Sbjct:   139 FILFGFFSLILYGAAKPMKPKITVKSITFETLKIQAGQDAGGVGTDMITMNATLRMLYRN 198

Query:    73 KSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNM 131
                 FG+H++   ID+SF ++ I S    K Y          ++V     P+YG+G  +
Sbjct:   199 TGTFFGVHVTSTPIDLSFSQIKIGSGSVKKFYQGRKSERTVLVHVIGEKIPLYGSGSTL 257

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2160026 AT5G42860 "AT5G42860" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
 Identities = 30/108 (27%), Positives = 52/108 (48%)

Query:    24 FMASKXXXXLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISP 83
             + A+K     IS+K     Q  +  G D+ G+ T ++T N ++ +L  N    FG+H++ 
Sbjct:   129 YAAAKPQKPKISVKSITFEQLKVQAGQDAGGIGTDMITMNATLRMLYRNTGTFFGVHVTS 188

Query:    84 PVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNM 131
               ID+SF ++ I S    K Y +        + V     P+YG+G  +
Sbjct:   189 SPIDLSFSQITIGSGSIKKFYQSRKSQRTVVVNVLGDKIPLYGSGSTL 236

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2132811 AT4G35170 "AT4G35170" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 47/192 (24%), Positives = 82/192 (42%)

Query:     2 CLDLFANKLETFAEFGSCIACFFMASKXXXXLISIKIAGIRQFGLGEGVDSTGVATKILT 61
             CL LF   L  F  F  C+  + + SK    + ++K   +    +  G D +GV T +LT
Sbjct:   112 CL-LFTLVL-AFTLF--CLILWGV-SKSFAPIATLKEMVLENLNVQSGNDQSGVLTDMLT 166

Query:    62 SNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRN 121
              N +V +L  N +  F +H++   + +S+ +L +AS    +         +    V    
Sbjct:   167 LNSTVRILYRNPATFFTVHVTSAPLQLSYSQLILASGQMGEFSQRRKSERIIETKVFGDQ 226

Query:   122 KPMYGAGRNM-QDLLELGKG-LPLIIRMSFRTNYRVVWDLIKPEFHHEAECLLLLNRKYD 179
              P+YG    +     E  +  LPL +  + R    V+  L+K  FH   +C +      D
Sbjct:   227 IPLYGGVPALFGQRAEPDQVVLPLNLTFTLRARAYVLGRLVKTTFHSNIKCSITFYG--D 284

Query:   180 KKHRTQVYNSTC 191
             K  +T   + +C
Sbjct:   285 KLGKTLDLSKSC 296


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.140   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      195       191   0.00094  110 3  11 22  0.39    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  162 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.26u 0.30s 15.56t   Elapsed:  00:00:01
  Total cpu time:  15.26u 0.30s 15.56t   Elapsed:  00:00:01
  Start:  Fri May 10 19:11:52 2013   End:  Fri May 10 19:11:53 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	195
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.53
smart00769	100	WHy Water Stress and Hypersensitive response.	97.77
PLN03160	219	uncharacterized protein; Provisional	94.81
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	94.31
COG5608	161	LEA14-like dessication related protein [Defense me	93.57
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	89.04
PRK10893	192	lipopolysaccharide exporter periplasmic protein; P	81.39

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=1.8e-33  Score=234.85  Aligned_cols=177  Identities=10%  Similarity=0.091  Sum_probs=142.6

Q ss_pred             hHHHHHHHHHHHHHHHheeeeEEecCCCCeEEEEEEEEEEEeecCCCCCCccccceEEEEEEEEEEEecCCCeEEEEEcC
Q 047150            4 DLFANKLETFAEFGSCIACFFMASKPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISP   83 (195)
Q Consensus         4 ~l~~~~l~~i~l~gi~~lilwlv~rP~~P~f~v~~~~v~~fnl~~~~d~sg~~t~~l~~n~~~~v~~~NPN~~igI~Y~~   83 (195)
                      ||.+.+.++++++++++.++|+++|||.|+|+++++++++|+++.+.    .+...++++++++++++|||+ +||+|++
T Consensus        39 c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~----~~~~~~n~tl~~~v~v~NPN~-~~~~Y~~  113 (219)
T PLN03160         39 CCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNT----TLRPGTNITLIADVSVKNPNV-ASFKYSN  113 (219)
T ss_pred             EHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCC----CCceeEEEEEEEEEEEECCCc-eeEEEcC
Confidence            34444444556678888899999999999999999999999997521    122356777888899999999 8999999


Q ss_pred             CEEEEEECceeeccCCCCCCcccCCCeeEEEEEEEEeeeeccCccccchhhhhcCceEeEEEEEEEEEeEEEEEEEEcce
Q 047150           84 PVIDMSFGRLPIASSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTNYRVVWDLIKPE  163 (195)
Q Consensus        84 ~~~~v~Y~~~~la~~~lp~FyQ~~kn~t~v~~~l~g~~v~l~~~~~~l~~~~~~~g~V~l~l~~~~rvr~kv~G~l~~~~  163 (195)
                      +++.++|+|+.+|.+.+|+|||++++++.+.+.+......+.. +..|.++.+ +|.+||+++++++.|.++ |.+.+++
T Consensus       114 ~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~-~~~L~~D~~-~G~v~l~~~~~v~gkVkv-~~i~k~~  190 (219)
T PLN03160        114 TTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS-VPGLLTDIS-SGLLNMNSYTRIGGKVKI-LKIIKKH  190 (219)
T ss_pred             eEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceecc-chhHHHHhh-CCeEEEEEEEEEEEEEEE-EEEEEEE
Confidence            9999999999999999999999999999999987654322222 345655544 789999999999999994 6788999


Q ss_pred             eeEEEEEEEEEecCCCCcccceeecCceee
Q 047150          164 FHHEAECLLLLNRKYDKKHRTQVYNSTCIT  193 (195)
Q Consensus       164 ~~~~V~C~~~v~~~~~~~~~~~~~~~~C~~  193 (195)
                      ++.+++|++.|+..+     ..+++..|+.
T Consensus       191 v~~~v~C~v~V~~~~-----~~i~~~~C~~  215 (219)
T PLN03160        191 VVVKMNCTMTVNITS-----QAIQGQKCKR  215 (219)
T ss_pred             EEEEEEeEEEEECCC-----CEEeccEecc
Confidence            999999999997743     4567778975

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.53  E-value=2.1e-14  Score=104.08  Aligned_cols=99  Identities=18%  Similarity=0.287  Sum_probs=72.8

Q ss_pred             EEEEecCCCeEEEEEcCCEEEEEECceeec-cCCCCCCcccCCCeeEEEEEEEEeeeeccCccccchhhhhcCceEeEEE
Q 047150           67 DLLVDNKSKLFGLHISPPVIDMSFGRLPIA-SSHGPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLII  145 (195)
Q Consensus        67 ~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la-~~~lp~FyQ~~kn~t~v~~~l~g~~v~l~~~~~~l~~~~~~~g~V~l~l  145 (195)
                      +++++|||. ++|+|++.++.++|+|..+| ....++|+|++++++.+...+..+...+   ...+.++.  ++..++++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l---~~~l~~~~--~~~~~~~v   74 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL---PRLLKDLL--AGRVPFDV   74 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH---HHHHHHHH--HTTSCEEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH---HHHHHhhh--ccccceEE
Confidence            478899999 99999999999999999999 7788999999999999999877765443   33444333  24567777


Q ss_pred             EEEEEEeEEEEEEEEcceeeEEEEEE
Q 047150          146 RMSFRTNYRVVWDLIKPEFHHEAECL  171 (195)
Q Consensus       146 ~~~~rvr~kv~G~l~~~~~~~~V~C~  171 (195)
                      .++++.+++|++.....+++..++|.
T Consensus        75 ~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   75 TYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEEcccceeeeEEEeEEeE
Confidence            77777788854544445566666664

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=97.77  E-value=0.0002  Score=52.46  Aligned_cols=85  Identities=12%  Similarity=0.139  Sum_probs=62.6

Q ss_pred             eEEEEEEEEEEEecCCCeEEEEEcCCEEEEEECceeeccCCCC-CCcccCCCeeEEEEEEEEeeeeccCccccchhhhhc
Q 047150           59 ILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGP-KLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLEL  137 (195)
Q Consensus        59 ~l~~n~~~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la~~~lp-~FyQ~~kn~t~v~~~l~g~~v~l~~~~~~l~~~~~~  137 (195)
                      .....+.+++.+.|||.. .+.|+..+..++|+|..+|+|..+ ..-.+.++++.+.+.+.-+.   ....+.+.+ ..+
T Consensus        12 ~~~~~~~l~l~v~NPN~~-~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~~---~~~~~~~~~-l~~   86 (100)
T smart00769       12 GLEIEIVLKVKVQNPNPF-PIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVNL---FLAEALIWH-IAN   86 (100)
T ss_pred             ceEEEEEEEEEEECCCCC-ccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEeeh---hHhHHHHHh-hcc
Confidence            356778888999999996 999999999999999999999985 68899999999988876631   111222222 233


Q ss_pred             CceEeEEEEEE
Q 047150          138 GKGLPLIIRMS  148 (195)
Q Consensus       138 ~g~V~l~l~~~  148 (195)
                      +..++.+++.+
T Consensus        87 ~~~~~y~l~g~   97 (100)
T smart00769       87 GEEIPYRLDGK   97 (100)
T ss_pred             CCCccEEEEEE
Confidence            44566665554

>PLN03160 uncharacterized protein; Provisional

Probab=94.81  E-value=0.88  Score=38.06  Aligned_cols=95  Identities=9%  Similarity=0.064  Sum_probs=65.0

Q ss_pred             ChhhHHHHHHHHHHHHHHHheeeeEEecC--CCCeEEEEEEEEEE-------EeecCCCCCCccccceEEEEEE------
Q 047150            1 MCLDLFANKLETFAEFGSCIACFFMASKP--PPPLISIKIAGIRQ-------FGLGEGVDSTGVATKILTSNCS------   65 (195)
Q Consensus         1 ~~~~l~~~~l~~i~l~gi~~lilwlv~rP--~~P~f~v~~~~v~~-------fnl~~~~d~sg~~t~~l~~n~~------   65 (195)
                      ||.++++.+|+++++++++++.++=-=+|  +--.++++++.++.       +|++            ++++++      
T Consensus        39 c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~t------------l~~~v~v~NPN~  106 (219)
T PLN03160         39 CCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNIT------------LIADVSVKNPNV  106 (219)
T ss_pred             EHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEE------------EEEEEEEECCCc
Confidence            79999999999888887777777667899  57778888887753       2322            222111      


Q ss_pred             EEEEEecCCCeEEEEEcCCEEEEEECceeeccCCCCCCcccCCCeeEE
Q 047150           66 VDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKLYAASHDSSLF  113 (195)
Q Consensus        66 ~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la~~~lp~FyQ~~kn~t~v  113 (195)
                      ..+..+  |-...++|+...+    +...+..|..+++.+.+.|.++.
T Consensus       107 ~~~~Y~--~~~~~v~Y~g~~v----G~a~~p~g~~~ar~T~~l~~tv~  148 (219)
T PLN03160        107 ASFKYS--NTTTTIYYGGTVV----GEARTPPGKAKARRTMRMNVTVD  148 (219)
T ss_pred             eeEEEc--CeEEEEEECCEEE----EEEEcCCcccCCCCeEEEEEEEE
Confidence            234443  3457889987544    34567777889999999888853

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=94.31  E-value=0.59  Score=39.78  Aligned_cols=57  Identities=9%  Similarity=0.153  Sum_probs=42.1

Q ss_pred             eEEEEEEEEEEEecCCCeEEEEEcCCEEEEEECceeeccCCCCCC-cccCCCeeEEEEE
Q 047150           59 ILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPKL-YAASHDSSLFRLY  116 (195)
Q Consensus        59 ~l~~n~~~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la~~~lp~F-yQ~~kn~t~v~~~  116 (195)
                      .+..|++-.+.+.|||= +-|......+++.|...-+|.+..... .-++++...+...
T Consensus       121 ~v~l~itn~lNIsN~NF-y~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~t  178 (238)
T PF07092_consen  121 TVQLNITNTLNISNPNF-YPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYT  178 (238)
T ss_pred             EEEEEEEEEEEccCCCE-EEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEE
Confidence            57888888899999996 599999999999999998998865322 3334444444433

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=93.57  E-value=3.1  Score=33.20  Aligned_cols=59  Identities=5%  Similarity=0.011  Sum_probs=49.1

Q ss_pred             EEEEEEEEEEecCCCeEEEEEcCCEEEEEECceeeccCCC-CCCcccCCCeeEEEEEEEEe
Q 047150           61 TSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHG-PKLYAASHDSSLFRLYVGTR  120 (195)
Q Consensus        61 ~~n~~~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la~~~l-p~FyQ~~kn~t~v~~~l~g~  120 (195)
                      ...+-.++.++|||.. -|-....+..++-+|..+|.|.. ..+--++++..++.+.+.-+
T Consensus        49 ~~EiV~t~KiyNPN~f-PipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l~~d  108 (161)
T COG5608          49 ETEIVGTLKIYNPNPF-PIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPLRLD  108 (161)
T ss_pred             ceEEEEEEEecCCCCc-ceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEEEEEe
Confidence            4466678889999995 88888888889889999999975 55888999999999886654

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=89.04  E-value=1.9  Score=39.15  Aligned_cols=31  Identities=13%  Similarity=0.045  Sum_probs=23.9

Q ss_pred             EEEEEEEecCCCeEEEEEcCCEEEEEECceee
Q 047150           64 CSVDLLVDNKSKLFGLHISPPVIDMSFGRLPI   95 (195)
Q Consensus        64 ~~~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~l   95 (195)
                      ++++|.+.|||= |.|..++.++.+|=+..-+
T Consensus       350 fdl~V~A~NPn~-~~V~I~d~dldIFAKS~yv  380 (387)
T PF12751_consen  350 FDLTVEAFNPNW-FTVTIDDMDLDIFAKSRYV  380 (387)
T ss_pred             EeeEEEEECCCe-EEEEeccceeeeEecCCcc
Confidence            345778999998 5999999999988554433

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PRK10893 lipopolysaccharide exporter periplasmic protein; Provisional

Probab=81.39  E-value=12  Score=30.67  Aligned_cols=36  Identities=3%  Similarity=-0.053  Sum_probs=25.6

Q ss_pred             HHHHHHHHheeeeE-----------EecCCCCeEEEEEEEEEEEeec
Q 047150           12 TFAEFGSCIACFFM-----------ASKPPPPLISIKIAGIRQFGLG   47 (195)
Q Consensus        12 ~i~l~gi~~lilwl-----------v~rP~~P~f~v~~~~v~~fnl~   47 (195)
                      +|+.+++.+++.|.           ...+|.|.|..++++...|+-+
T Consensus        10 ~il~~~~l~l~~W~l~~~~~~~~~~~~~~~~Pdy~~~~~~~~~yd~~   56 (192)
T PRK10893         10 ILLALIALVLIGWNLADKDEDTAPVVVNNNDPTYQSQHTDTVVYNPE   56 (192)
T ss_pred             HHHHHHHHHHHHhhccCCccccccccCCCCCCCEEEeccEEEEECCC
Confidence            34444445555564           3457899999999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	195
1yyc_A	174	LEA protein, putative late embryogenesis abundant	97.83
1xo8_A	151	AT1G01470; structural genomics, protein structure	97.51
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	96.46

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=97.83  E-value=9.3e-05  Score=58.86  Aligned_cols=103  Identities=12%  Similarity=0.089  Sum_probs=75.3

Q ss_pred             CCCeEEEEEEEEEEEeecCCCCCCccccceEEEEEEEEEEEecCCCeEEEEEcCCEEEEEECceeeccCCCCC-CcccCC
Q 047150           30 PPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPK-LYAASH  108 (195)
Q Consensus        30 ~~P~f~v~~~~v~~fnl~~~~d~sg~~t~~l~~n~~~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la~~~lp~-FyQ~~k  108 (195)
                      ++|++++.++++.+.++..             ..+.+++++.|||.. .|-++.++..++=+|..+++|..+. .--+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l~~-------------~~~~l~LrV~NPN~~-pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~  108 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRDG-------------VDYHAKVSVKNPYSQ-SIPICQISYILKSATRTIASGTIPDPGSLVGS  108 (174)
T ss_dssp             CCCEEEEEEEEEEEECSSS-------------EEEEEEEEEEECSSS-CCBCCSEEEEEEESSSCEEEEEESCCCBCCSS
T ss_pred             CCCEEEEEEeEEeccccce-------------EEEEEEEEEECCCCC-CccccceEEEEEECCEEEEEEecCCCceECCC
Confidence            6899999999999877652             345577888999996 9999999999999999999998866 666888


Q ss_pred             CeeEEEEEEEEeeeeccCccccchhhhhcCceEeEEEEEEEE
Q 047150          109 DSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFR  150 (195)
Q Consensus       109 n~t~v~~~l~g~~v~l~~~~~~l~~~~~~~g~V~l~l~~~~r  150 (195)
                      .++++.+.+.-.--.+   .+.+.+ .+..+.++-+|++...
T Consensus       109 g~~~v~Vpv~v~~~~l---~~~~~~-l~~~~~i~Y~L~g~L~  146 (174)
T 1yyc_A          109 GTTVLDVPVKVAYSIA---VSLMKD-MCTDWDIDYQLDIGLT  146 (174)
T ss_dssp             EEEEEEEEEEESHHHH---HHTCCC-CCSSEEECEEEEEEEE
T ss_pred             CcEEEEEEEEEEHHHH---HHHHHh-cCCCCccceEEEEEEE
Confidence            9999998876542111   111221 2224567777766544

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=97.51  E-value=2.6e-05  Score=60.53  Aligned_cols=104  Identities=10%  Similarity=0.056  Sum_probs=72.7

Q ss_pred             CCCeEEEEEEEEEEEeecCCCCCCccccceEEEEEEEEEEEecCCCeEEEEEcCCEEEEEECceeeccCCCCC-CcccCC
Q 047150           30 PPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPK-LYAASH  108 (195)
Q Consensus        30 ~~P~f~v~~~~v~~fnl~~~~d~sg~~t~~l~~n~~~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la~~~lp~-FyQ~~k  108 (195)
                      ++|++++.++++.+.++.             ...+.+++.+.|||.. .|.++.++..++=+|..+++|..+. .--+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~~-------------~~~~~~~l~V~NPN~~-~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~   85 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRD-------------SVEYLAKVSVTNPYSH-SIPICEISFTFHSAGREIGKGKIPDPGSLKAK   85 (151)
T ss_dssp             CSCCCBCSEEEECCCTTT-------------EECEEEEEEEECSSSS-CCCCEEEEEEEESSSSCEEEEEEEECCCCSSS
T ss_pred             CCCEEEEEEeEEeccCcc-------------eeEEEEEEEEECCCCC-CcccccEEEEEEECCEEEEEEecCCCcEECCC
Confidence            689999998888866543             3456678888999996 8888888888877899999998755 666888


Q ss_pred             CeeEEEEEEEEeeeeccCccccchhhhhcCceEeEEEEEEEEE
Q 047150          109 DSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRT  151 (195)
Q Consensus       109 n~t~v~~~l~g~~v~l~~~~~~l~~~~~~~g~V~l~l~~~~rv  151 (195)
                      .++++.+.+...--.+   .+.+. +.+....++-++++...+
T Consensus        86 g~~~v~vpv~v~~~~l---~~~~~-~l~~~~~i~Y~l~g~l~i  124 (151)
T 1xo8_A           86 DMTALDIPVVVPYSIL---FNLAR-DVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             SEEEEEECCCEEHHHH---HHHHH-HHHHHSEEEEEEEEEEEE
T ss_pred             CcEEEEEEEEEEHHHH---HHHHH-hcccCCcccEEEEEEEEE
Confidence            8999888765542111   11122 222245677777665543

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=96.46  E-value=0.01  Score=45.14  Aligned_cols=87  Identities=7%  Similarity=0.047  Sum_probs=60.8

Q ss_pred             EEEEEEEEEEecCCCeEEEEEcCCEEEEEECceeeccCC-CCCCcccCCCeeEEEEEEEEeeeeccCccccchhhhhcCc
Q 047150           61 TSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSH-GPKLYAASHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGK  139 (195)
Q Consensus        61 ~~n~~~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la~~~-lp~FyQ~~kn~t~v~~~l~g~~v~l~~~~~~l~~~~~~~g  139 (195)
                      ...+.+++.+.|||.. .+.++..+..++..|+.+|+|. ...+--++.+++++.+.+.-+.-.+...   +.+..+++.
T Consensus        17 ~t~~~~~l~V~NPN~~-~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~---~~~hi~nge   92 (136)
T 3but_A           17 QTEIVALAKVRNEDVV-PIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREW---WVTHIANGE   92 (136)
T ss_dssp             EEEEEEEEEEECCSSS-CEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTH---HHHHHHTTS
T ss_pred             EEEEEEEEEEeCCCCc-ceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHH---HHHHhhcCC
Confidence            4567778889999985 9999999999999999999986 4667778888888988877664333221   222233222


Q ss_pred             eEeEEEEEEEEE
Q 047150          140 GLPLIIRMSFRT  151 (195)
Q Consensus       140 ~V~l~l~~~~rv  151 (195)
                      .-.|++++++.+
T Consensus        93 ~s~l~i~~~~~l  104 (136)
T 3but_A           93 KTKIRVAIKPTI  104 (136)
T ss_dssp             EEEEEEEEEEEE
T ss_pred             ceEEEEEEEEEE
Confidence            445555555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	195
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	97.76

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.76  E-value=3.7e-06  Score=63.57  Aligned_cols=107  Identities=10%  Similarity=0.079  Sum_probs=75.2

Q ss_pred             cCCCCeEEEEEEEEEEEeecCCCCCCccccceEEEEEEEEEEEecCCCeEEEEEcCCEEEEEECceeeccCCCCC-Cccc
Q 047150           28 KPPPPLISIKIAGIRQFGLGEGVDSTGVATKILTSNCSVDLLVDNKSKLFGLHISPPVIDMSFGRLPIASSHGPK-LYAA  106 (195)
Q Consensus        28 rP~~P~f~v~~~~v~~fnl~~~~d~sg~~t~~l~~n~~~~v~~~NPN~~igI~Y~~~~~~v~Y~~~~la~~~lp~-FyQ~  106 (195)
                      |=++|+.++.++++.++++.             ..++.+++.+.|||.. +|..+..+..++.+|..+++|..+. +--+
T Consensus        18 ~~~kPev~l~~v~i~~v~~~-------------~~~l~~~l~V~NPN~~-~l~i~~l~y~l~~~g~~ia~G~~~~~~~ip   83 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD-------------SVEYLAKVSVTNPYSH-SIPICEISFTFHSAGREIGKGKIPDPGSLK   83 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT-------------EECEEEEEEEECSSSS-CCCCEEEEEEEESSSSCEEEEEEEECCCCS
T ss_pred             CCCCCeEEEEEEEeeecccc-------------eEEEEEEEEEECCCCC-ceeeeeEEEEEEECCEEEEeEecCCCcEEc
Confidence            33689999999999876654             3456677888999996 9999999999999999999998755 5557


Q ss_pred             CCCeeEEEEEEEEeeeeccCccccchhhhhcCceEeEEEEEEEEEe
Q 047150          107 SHDSSLFRLYVGTRNKPMYGAGRNMQDLLELGKGLPLIIRMSFRTN  152 (195)
Q Consensus       107 ~kn~t~v~~~l~g~~v~l~~~~~~l~~~~~~~g~V~l~l~~~~rvr  152 (195)
                      .+.++.+.+.+...--.+   .+.+.+ ..+++.++-++++...+.
T Consensus        84 a~~~~~v~vpv~v~~~~l---~~~~~~-i~~~~~i~Y~l~g~l~~d  125 (151)
T d1xo8a_          84 AKDMTALDIPVVVPYSIL---FNLARD-VGVDWDIDYELQIGLTID  125 (151)
T ss_dssp             SSSEEEEEECCCEEHHHH---HHHHHH-HHHHSEEEEEEEEEEEEC
T ss_pred             CCCcEEEEEEEEEEHHHH---HHHHHh-hccCCCccEEEEEEEEEe
Confidence            889999988765532111   222232 222455766666655543