Citrus Sinensis ID: 047166

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
AVSAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDGSRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRFPQGFPKECAVH
cccccccccccEEEEcccccEEEccccEEEEEEcccccccEEEccEEEEEEEEEEEEEccccccEEEEEEEEEcccccccEEEEEEccccccccEEEEEEEEEccccccEEEEEEccccccccEEEEEEEEccEEEEEEccEEEEEEEccccccccccccccEEEEEEEEccccccccccEEEEccccccEEEEEEEEEEEccccHHcccccHHHHHHHHHHHHccEEEEccccccccccccccccccc
cccccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEccccccccEEEEEEccccccccEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEcccEEEEEEccccEEEEcccHHcccccccccccEEEEEccccccHHHccccEEcccccccEEEEEccccccHHHHHHHHHccHHHHHHHHHHHHccEEEEccccccccccccccccccc
avsagnfneefditwgdgrgkifnngqlltlnldrysgsgfqskkqhlfgkidmqlklvprnsagtvTAYYLRsqgptwdeidfeflgnlsghpytvhtnvysqgkgdreqqfhlwfdpavnfhtysvlwnpqrivfsvdgipirefknleaigvpfpknqpmriysslwnaddwatrggliktdwsqapftasyrnfkvdgsRAWLLQQMDSTNQRRLYWVRKNHMIYNyctdtkrfpqgfpkecavh
avsagnfneefditwgdgrgKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLeaigvpfpknQPMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDGSRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRFPQGFPKECAVH
AVSAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDGSRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRFPQGFPKECAVH
********EEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDGSRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRFP**********
**SAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDGSRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRFPQGFPKECAV*
AVSAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDGSRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRFPQGFPKECAVH
*****NFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDGSRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRFPQGFPKEC***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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AVSAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDGSRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRFPQGFPKECAVH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query249 2.2.26 [Sep-21-2011]
P24806269 Xyloglucan endotransgluco yes no 0.995 0.921 0.728 1e-112
Q38907284 Probable xyloglucan endot no no 0.983 0.862 0.720 1e-111
Q38857284 Xyloglucan endotransgluco no no 0.983 0.862 0.675 1e-108
Q38910286 Probable xyloglucan endot no no 0.983 0.856 0.685 1e-107
P35694283 Brassinosteroid-regulated no no 0.987 0.869 0.679 1e-102
Q9FI31282 Xyloglucan endotransgluco no no 0.987 0.872 0.629 1e-100
Q8LG58291 Probable xyloglucan endot no no 0.975 0.835 0.634 2e-99
Q38911289 Probable xyloglucan endot no no 0.975 0.840 0.65 1e-98
Q9ZSU4287 Xyloglucan endotransgluco no no 0.995 0.864 0.643 1e-97
Q9ZV40305 Probable xyloglucan endot no no 0.995 0.813 0.592 4e-97
>sp|P24806|XTH24_ARATH Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2 Back     alignment and function desciption
 Score =  405 bits (1042), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 182/250 (72%), Positives = 217/250 (86%), Gaps = 2/250 (0%)

Query: 1   AVSAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVP 60
           +VSA +FN + ++ WG+GRGKI NNGQLLTL+LD+ SGSGFQSK ++LFGKIDMQ+KLVP
Sbjct: 18  SVSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVP 77

Query: 61  RNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPA 120
            NSAGTVT +YL+S+G TWDEIDFEFLGN+SG PYT+HTNVY+QGKGD+EQQFHLWFDP 
Sbjct: 78  GNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPT 137

Query: 121 VNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGG 180
            NFHTYS+LWNPQRI+ +VD  PIREFKN E++GV FPKN+PMR+Y+SLWNADDWATRGG
Sbjct: 138 ANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGG 197

Query: 181 LIKTDWSQAPFTASYRNFKVDG--SRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRF 238
           L+KTDWS+APF ASYRN K+D   +  W  Q+MDST+Q RL WV+KN+MIYNYCTD +RF
Sbjct: 198 LVKTDWSKAPFMASYRNIKIDSKPNSNWYTQEMDSTSQARLKWVQKNYMIYNYCTDHRRF 257

Query: 239 PQGFPKECAV 248
           PQG PKEC  
Sbjct: 258 PQGAPKECTT 267
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. May be required during development to modify the walls of cells under mechanical stress.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q38907|XTH25_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2 Back     alignment and function description
>sp|Q38857|XTH22_ARATH Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1 Back     alignment and function description
>sp|Q38910|XTH23_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1 Back     alignment and function description
>sp|P35694|BRU1_SOYBN Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1 Back     alignment and function description
>sp|Q9FI31|XTH20_ARATH Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1 Back     alignment and function description
>sp|Q8LG58|XTH16_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2 Back     alignment and function description
>sp|Q38911|XTH15_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZSU4|XTH14_ARATH Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZV40|XTH21_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
359484996297 PREDICTED: probable xyloglucan endotrans 0.995 0.835 0.727 1e-114
147854712287 hypothetical protein VITISV_036640 [Viti 0.995 0.864 0.727 1e-113
401466646285 xyloglucan endotransglycosylase/hydrolas 0.987 0.863 0.740 1e-113
449457143283 PREDICTED: probable xyloglucan endotrans 0.987 0.869 0.726 1e-113
356564854 597 PREDICTED: uncharacterized protein LOC10 0.995 0.415 0.730 1e-113
356547513285 PREDICTED: probable xyloglucan endotrans 0.983 0.859 0.730 1e-113
359485091345 PREDICTED: probable xyloglucan endotrans 0.995 0.718 0.723 1e-112
351724937285 syringolide-induced protein 19-1-5 precu 0.983 0.859 0.723 1e-112
449517329283 PREDICTED: probable xyloglucan endotrans 0.987 0.869 0.722 1e-112
115334954285 xyloglucan endotransglucosylase/hydrolas 0.995 0.870 0.718 1e-112
>gi|359484996|ref|XP_002273742.2| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/268 (72%), Positives = 220/268 (82%), Gaps = 20/268 (7%)

Query: 1   AVSAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVP 60
           A SAGNF ++FDITWGDGRGKI NNG+LLTL+LD+ SGSGFQSK ++LFGKIDMQLKLVP
Sbjct: 26  AASAGNFYQDFDITWGDGRGKILNNGELLTLSLDKPSGSGFQSKNEYLFGKIDMQLKLVP 85

Query: 61  RNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPA 120
            NSAGTVTAYYL SQGPT DEIDFEFLGNLSG PY +HTNV+SQGKG+REQQF+LWFDP 
Sbjct: 86  GNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPT 145

Query: 121 VNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGG 180
            +FHTYS+LWNPQRI+FSVDG PIREFKN E+IGVP+PKNQPMRIYSSLWNADDWATRGG
Sbjct: 146 ADFHTYSILWNPQRIIFSVDGTPIREFKNSESIGVPYPKNQPMRIYSSLWNADDWATRGG 205

Query: 181 LIKTDWSQAPFTASYRNFKVDGSR--------------------AWLLQQMDSTNQRRLY 220
           L+KTDWSQAPFTASYRNF  +                        W  Q++DST+Q R+ 
Sbjct: 206 LVKTDWSQAPFTASYRNFNANACLWSSGSSSCSSTSPSSTSTNGGWYSQELDSTSQERMK 265

Query: 221 WVRKNHMIYNYCTDTKRFPQGFPKECAV 248
           WV+KN+MIYNYC DTKRFPQG P EC+ 
Sbjct: 266 WVQKNYMIYNYCADTKRFPQGLPPECSA 293

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147854712|emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera] Back     alignment and taxonomy information
>gi|401466646|gb|AFP93557.1| xyloglucan endotransglycosylase/hydrolase 1 [Neolamarckia cadamba] Back     alignment and taxonomy information
>gi|449457143|ref|XP_004146308.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like isoform 2 [Cucumis sativus] gi|29500891|emb|CAD87535.1| putative xyloglucan endotransglycosylase [Cucumis sativus] gi|29500899|emb|CAD87533.1| putative xyloglucan endotransglycosylase [Cucumis sativus] Back     alignment and taxonomy information
>gi|356564854|ref|XP_003550662.1| PREDICTED: uncharacterized protein LOC100782365 [Glycine max] Back     alignment and taxonomy information
>gi|356547513|ref|XP_003542156.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Glycine max] Back     alignment and taxonomy information
>gi|359485091|ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|351724937|ref|NP_001237075.1| syringolide-induced protein 19-1-5 precursor [Glycine max] gi|19911573|dbj|BAB86890.1| syringolide-induced protein 19-1-5 [Glycine max] Back     alignment and taxonomy information
>gi|449517329|ref|XP_004165698.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|115334954|gb|ABI94063.1| xyloglucan endotransglucosylase/hydrolase 3 [Cucumis melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
TAIR|locus:2128936269 XTH24 "xyloglucan endotransglu 0.987 0.914 0.733 4e-106
TAIR|locus:2174597284 XTH25 "xyloglucan endotransglu 0.983 0.862 0.720 3.2e-104
TAIR|locus:2174497284 TCH4 "Touch 4" [Arabidopsis th 0.819 0.718 0.733 4.6e-103
TAIR|locus:2117567286 XTR6 "xyloglucan endotransglyc 0.791 0.688 0.777 1.2e-102
TAIR|locus:2162652282 XTH20 "xyloglucan endotransglu 0.987 0.872 0.629 3.3e-95
TAIR|locus:2129445289 XTH15 "xyloglucan endotransglu 0.783 0.674 0.748 1.3e-94
TAIR|locus:2206335282 XTH17 "xyloglucan endotransglu 0.983 0.868 0.647 1e-93
TAIR|locus:2118746282 XTH18 "xyloglucan endotransglu 0.987 0.872 0.633 4.3e-93
TAIR|locus:2117492287 XTH14 "xyloglucan endotransglu 0.987 0.857 0.648 3e-92
TAIR|locus:2118751277 XTH19 "xyloglucan endotransglu 0.991 0.891 0.623 6.3e-92
TAIR|locus:2128936 XTH24 "xyloglucan endotransglucosylase/hydrolase 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
 Identities = 182/248 (73%), Positives = 217/248 (87%)

Query:     1 AVSAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVP 60
             +VSA +FN + ++ WG+GRGKI NNGQLLTL+LD+ SGSGFQSK ++LFGKIDMQ+KLVP
Sbjct:    18 SVSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVP 77

Query:    61 RNSAGTVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPA 120
              NSAGTVT +YL+S+G TWDEIDFEFLGN+SG PYT+HTNVY+QGKGD+EQQFHLWFDP 
Sbjct:    78 GNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPT 137

Query:   121 VNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGG 180
              NFHTYS+LWNPQRI+ +VD  PIREFKN E++GV FPKN+PMR+Y+SLWNADDWATRGG
Sbjct:   138 ANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGG 197

Query:   181 LIKTDWSQAPFTASYRNFKVDG--SRAWLLQQMDSTNQRRLYWVRKNHMIYNYCTDTKRF 238
             L+KTDWS+APF ASYRN K+D   +  W  Q+MDST+Q RL WV+KN+MIYNYCTD +RF
Sbjct:   198 LVKTDWSKAPFMASYRNIKIDSKPNSNWYTQEMDSTSQARLKWVQKNYMIYNYCTDHRRF 257

Query:   239 PQGFPKEC 246
             PQG PKEC
Sbjct:   258 PQGAPKEC 265
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0009739 "response to gibberellin stimulus" evidence=IGI
GO:0009740 "gibberellic acid mediated signaling pathway" evidence=TAS
GO:0009741 "response to brassinosteroid stimulus" evidence=IGI
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA;IDA;TAS
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0009828 "plant-type cell wall loosening" evidence=TAS
GO:0005737 "cytoplasm" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0007568 "aging" evidence=IEP
TAIR|locus:2174597 XTH25 "xyloglucan endotransglucosylase/hydrolase 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174497 TCH4 "Touch 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117567 XTR6 "xyloglucan endotransglycosylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162652 XTH20 "xyloglucan endotransglucosylase/hydrolase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129445 XTH15 "xyloglucan endotransglucosylase/hydrolase 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206335 XTH17 "xyloglucan endotransglucosylase/hydrolase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118746 XTH18 "xyloglucan endotransglucosylase/hydrolase 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117492 XTH14 "xyloglucan endotransglucosylase/hydrolase 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118751 XTH19 "xyloglucan endotransglucosylase/hydrolase 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q41638XTHA_PHAAN2, ., 4, ., 1, ., 2, 0, 70.53100.96380.8219N/Ano
Q6YDN9XTH_BRAOB2, ., 4, ., 1, ., 2, 0, 70.52520.95980.8101N/Ano
Q38907XTH25_ARATH2, ., 4, ., 1, ., 2, 0, 70.72090.98390.8626nono
P93349XTH_TOBAC2, ., 4, ., 1, ., 2, 0, 70.54230.96380.8135N/Ano
Q41542XTH_WHEAT2, ., 4, ., 1, ., 2, 0, 70.52520.95980.8156N/Ano
Q40144XTH1_SOLLC2, ., 4, ., 1, ., 2, 0, 70.51920.96380.8108N/Ano
P24806XTH24_ARATH2, ., 4, ., 1, ., 2, 0, 70.7280.99590.9219yesno
Q8LNZ5XTHB_PHAAN2, ., 4, ., 1, ., 2, 0, 70.54470.95980.8156N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.207LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00031398001
SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (297 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-146
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 1e-102
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 2e-79
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 5e-29
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 1e-23
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 2e-20
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 3e-19
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 5e-11
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 7e-10
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  408 bits (1050), Expect = e-146
 Identities = 139/263 (52%), Positives = 185/263 (70%), Gaps = 20/263 (7%)

Query: 3   SAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRN 62
            A +F+E F +TWG    ++ N+G  + L LD+ SGSGF+SK ++LFG   M++KL P +
Sbjct: 2   VAASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPGD 61

Query: 63  SAGTVTAYYLRSQGPTW-DEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAV 121
           SAGTVTA+YL SQGP   DEIDFEFLGN++G PYT+ TNV++ G G REQ+ +LWFDP  
Sbjct: 62  SAGTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPTA 121

Query: 122 NFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGL 181
           +FHTYS+LWNP +IVF VD +PIR FKN EA+GVP+P +QPM +Y+S+W+  DWAT+GG 
Sbjct: 122 DFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGGR 181

Query: 182 IKTDWSQAPFTASYRNFKVDG--------------SRAWL----LQQMDSTNQRRLYWVR 223
           +K DWS APF ASYR+FK+DG              +  W      QQ+ +  QR + WVR
Sbjct: 182 VKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWVR 241

Query: 224 KNHMIYNYCTDTKRFPQGFPKEC 246
           +N+M+Y+YC D KR+P   P EC
Sbjct: 242 RNYMVYDYCDDRKRYP-VPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 249
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 100.0
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 100.0
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 100.0
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 100.0
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.94
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.78
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.75
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.67
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 96.34
cd00152201 PTX Pentraxins are plasma proteins characterized b 93.25
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 92.13
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 91.92
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 89.7
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 88.78
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 88.71
smart00560133 LamGL LamG-like jellyroll fold domain. 83.15
>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
Probab=100.00  E-value=6.3e-78  Score=531.36  Aligned_cols=243  Identities=56%  Similarity=1.088  Sum_probs=228.8

Q ss_pred             ccccccccceeeecCCCeEEecCCcEEEEEEecCCCCeEEEccceEeEEEEEEEEecCCCCCceEEEEEEeec-CCCCCe
Q 047166            3 SAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQ-GPTWDE   81 (249)
Q Consensus         3 ~~~~~~~~~~~~~~~~nv~~~~~G~~l~L~l~~~sG~~i~Sk~~~~YG~~eariKlp~g~s~G~~~AFwl~~~-~~~~~E   81 (249)
                      .+++|.++|.++|+++||++.++|..|+|+|++++|++|.||..|+||+||||||||+++++|+||||||+++ ||.++|
T Consensus         2 ~~~~f~~~~~~~w~~~~~~~~~~g~~~~L~ld~~s~~~i~Sk~~f~YG~~E~riKlp~g~s~G~~pAFwl~~~~wp~~~E   81 (263)
T cd02176           2 VAASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPGDSAGTVTAFYLSSQGPDNHDE   81 (263)
T ss_pred             CcCCccccceeeEcCCcEEEeCCCCEEEEEEcCCCCccEEEccEEEEEEEEEEEEeCCCCCCCeEEEEEECCCCCCCCCe
Confidence            4578999999999999999998888899999999999999999999999999999999877899999999998 689999


Q ss_pred             EEEEecCCCCCCceEEEeeeeeCCCCCcceEEEcCCCCCCCcEEEEEEEcCCcEEEEECCeeEEEEeecccCCcCCCCCC
Q 047166           82 IDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQ  161 (249)
Q Consensus        82 IDiE~lG~~~g~~~~~~tn~~~~g~~~~~~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVDG~~v~~~~~~~~~~~~~P~~~  161 (249)
                      ||||++|+.+++++++|+|+|.++.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+..+.+||+++
T Consensus        82 ID~E~lGn~~g~~~~~qtnv~~~g~g~r~~~~~l~fdpt~dFHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~  161 (263)
T cd02176          82 IDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPTADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQ  161 (263)
T ss_pred             EEEEEecccCCCceEEEEEEeCCCCCCCceeeecCCCCCCCeEEEEEEEccceEEEEECCEEEEEEecccccCCCCCccc
Confidence            99999999888899999999999988888899999999999999999999999999999999999998776677899889


Q ss_pred             ceEEEEEeeeCCCcCCCCCccccCCCCCCeEEEEeEEEEec-----------C---Cchhc----cCCCHHHHHHHHHHh
Q 047166          162 PMRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDG-----------S---RAWLL----QQMDSTNQRRLYWVR  223 (249)
Q Consensus       162 Pm~l~lnlw~gg~Wat~GG~~~~d~~~~P~~~~~~~~~v~~-----------~---~~~~~----~~~~~~~~~~~~~~~  223 (249)
                      ||+|++|||+||+|||+||++++||+++||+|.|++|+|.+           .   ..||+    ++|+++|+++|+|||
T Consensus       162 Pm~l~~niW~g~~WAt~gG~~~~d~~~aPf~a~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  241 (263)
T cd02176         162 PMGVYASIWDGSDWATQGGRVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWVR  241 (263)
T ss_pred             eEEEEEeeEcCCCcccCCCcccccCCCCCeeEEEeeEEEeeeecCCCCccccCCCccccccccccccCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999997           1   24766    379999999999999


Q ss_pred             hCCeeeecccCCCCCCCCCCCCC
Q 047166          224 KNHMIYNYCTDTKRFPQGFPKEC  246 (249)
Q Consensus       224 ~~~~~y~yc~d~~r~~~~~~~ec  246 (249)
                      ++|||||||.|++|||. +||||
T Consensus       242 ~~~~~y~yC~d~~r~~~-~p~ec  263 (263)
T cd02176         242 RNYMVYDYCDDRKRYPV-PPPEC  263 (263)
T ss_pred             HCCEEEecCCCCCcCCC-CcCCC
Confidence            99999999999999995 89999

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling.
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 2e-79
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 2e-41
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 2e-41
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 9e-40
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 1e-39
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 3e-15
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 8e-13
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 8e-13
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 3e-12
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 4e-12
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 4e-12
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 6e-12
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 2e-11
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 3e-11
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 2e-10
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 4e-10
3axd_A249 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 2e-07
2r49_A241 Mutational And Structural Studies Of E85i Reveal Th 6e-07
3h0o_A240 The Importance Of Ch-Pi Stacking Interactions Betwe 7e-07
3hr9_A241 The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta 2e-06
2hyk_A245 The Crystal Structure Of An Endo-Beta-1,3-Glucanase 3e-06
1mve_A243 Crystal Structure Of A Natural Circularly-Permutate 6e-06
1zm1_A241 Crystal Structures Of Complex F. Succinogenes 1,3-1 6e-06
1ajo_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 4e-04
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  291 bits (746), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 145/257 (56%), Positives = 174/257 (67%), Gaps = 18/257 (7%)
Query: 7   FNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGT 66
           F   +  TW     K FN G  + L+LD+Y+G+GFQSK  +LFG   MQ+KLVP +SAGT
Sbjct: 17  FGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGT 76
Query: 67  VTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTY 126
           VTA+YL SQ    DEIDFEFLGN +G PY + TNV++ GKGDREQ+ +LWFDP   FH Y
Sbjct: 77  VTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYY 136
Query: 127 SVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTDW 186
           SVLWN   IVF VD +PIR FKN + +GV FP NQPM+IYSSLWNADDWATRGGL KTDW
Sbjct: 137 SVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDW 196
Query: 187 SQAPFTASYRNFKVDGSRAWL-----------------LQQMDSTNQRRLYWVRKNHMIY 229
           S+APF ASYR+F +DG  A +                  Q +D+   RRL WVR+ + IY
Sbjct: 197 SKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIY 256
Query: 230 NYCTDTKRFPQGFPKEC 246
           NYCTD  R+P   P EC
Sbjct: 257 NYCTDRSRYP-SMPPEC 272
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|3AXD|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase V18yW203Y IN APO-Form Length = 249 Back     alignment and structure
>pdb|2R49|A Chain A, Mutational And Structural Studies Of E85i Reveal The Flexible Loops Of Fibrobacter Succinogenes 1,3-1,4-beta-d- Glucanaseglucanase Length = 241 Back     alignment and structure
>pdb|3H0O|A Chain A, The Importance Of Ch-Pi Stacking Interactions Between Carbohydrate And Aromatic Residues In Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D-Glucanase Length = 240 Back     alignment and structure
>pdb|3HR9|A Chain A, The Truncated Fibrobacter Succinogenes 1,3-1,4-Beta-D- Glucanase F40i Mutant Length = 241 Back     alignment and structure
>pdb|2HYK|A Chain A, The Crystal Structure Of An Endo-Beta-1,3-Glucanase From Alkaliphilic Nocardiopsis Sp.Strain F96 Length = 245 Back     alignment and structure
>pdb|1MVE|A Chain A, Crystal Structure Of A Natural Circularly-Permutated Jellyroll Protein: 1,3-1,4-Beta-D-Glucanase From Fibrobacter Succinogenes Length = 243 Back     alignment and structure
>pdb|1ZM1|A Chain A, Crystal Structures Of Complex F. Succinogenes 1,3-1,4-Beta- D-Glucanase And Beta-1,3-1,4-Cellotriose Length = 241 Back     alignment and structure
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-127 Length = 214 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-111
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 3e-98
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 7e-68
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 3e-67
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 3e-66
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 1e-63
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 1e-55
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 2e-53
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 6e-52
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 7e-21
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 7e-15
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 8e-12
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 6e-11
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 6e-11
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 8e-11
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 1e-10
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 2e-09
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 2e-09
3rq0_A269 Glycosyl hydrolases family protein 16; structural 6e-09
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 6e-09
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 1e-08
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 1e-07
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 2e-07
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 7e-05
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  320 bits (821), Expect = e-111
 Identities = 144/261 (55%), Positives = 172/261 (65%), Gaps = 18/261 (6%)

Query: 6   NFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAG 65
            F   +  TW     K FN G  + L+LD+Y+G+GFQSK  +LFG   MQ+KLVP +SAG
Sbjct: 16  AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 75

Query: 66  TVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHT 125
           TVTA+YL SQ    DEIDFEFLGN +G PY + TNV++ GKGDREQ+ +LWFDP   FH 
Sbjct: 76  TVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHY 135

Query: 126 YSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTD 185
           YSVLWN   IVF VD +PIR FKN + +GV FP NQPM+IYSSLWNADDWATRGGL KTD
Sbjct: 136 YSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTD 195

Query: 186 WSQAPFTASYRNFKVDGSR-----------------AWLLQQMDSTNQRRLYWVRKNHMI 228
           WS+APF ASYR+F +DG                       Q +D+   RRL WVR+ + I
Sbjct: 196 WSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTI 255

Query: 229 YNYCTDTKRFPQGFPKECAVH 249
           YNYCTD  R+P   P EC   
Sbjct: 256 YNYCTDRSRYPS-MPPECKRD 275
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 100.0
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 100.0
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 100.0
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.98
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.96
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.96
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.86
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.8
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 97.41
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 96.37
3pvn_A206 C-reactive protein; pentraxin family, immune syste 93.31
4dqa_A355 Uncharacterized protein; two domains structure, DU 93.29
3kqr_A204 Serum amyloid P-component; glycoprotein, disulfide 92.07
2v73_A191 CBM40, putative EXO-alpha-sialidase; carbohydrate- 87.48
2jkb_A 686 Sialidase B; intramolecular trans-sialidase, lyase 84.7
3hbk_A245 Putative glycosyl hydrolase; YP_001302580.1, WAS d 84.68
2sli_A 679 Intramolecular trans-sialidase; hydrolase, neurami 84.39
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=5e-74  Score=510.70  Aligned_cols=244  Identities=60%  Similarity=1.068  Sum_probs=228.2

Q ss_pred             ccccccccceeeecCCCeEEecCCcEEEEEEecCCCCeEEEccceEeEEEEEEEEecCCCCCceEEEEEEeecCCCCCeE
Q 047166            3 SAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEI   82 (249)
Q Consensus         3 ~~~~~~~~~~~~~~~~nv~~~~~G~~l~L~l~~~sG~~i~Sk~~~~YG~~eariKlp~g~s~G~~~AFwl~~~~~~~~EI   82 (249)
                      .+.+|.++|+++|+++||++.++|..|+|+|++.+|++|.||+.|+||+||||||||+++++|+||||||+++.|.++||
T Consensus        13 ~~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~~gEI   92 (278)
T 1umz_A           13 VDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEI   92 (278)
T ss_dssp             CCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEE
T ss_pred             cCCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCCCCeE
Confidence            36799999999999999999888988999999999999999999999999999999998778999999999988899999


Q ss_pred             EEEecCCCCCCceEEEeeeeeCCCCCcceEEEcCCCCCCCcEEEEEEEcCCcEEEEECCeeEEEEeecccCCcCCCCCCc
Q 047166           83 DFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQP  162 (249)
Q Consensus        83 DiE~lG~~~g~~~~~~tn~~~~g~~~~~~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVDG~~v~~~~~~~~~~~~~P~~~P  162 (249)
                      |||++|+.+++++++|+|+|.++.+++++++.+++|++++||+|+|+|+|++|+|||||++++++++.+..+.+||+++|
T Consensus        93 DmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf~~P  172 (278)
T 1umz_A           93 DFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQP  172 (278)
T ss_dssp             EEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSC
T ss_pred             EEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcCCCc
Confidence            99999998888899999999999888888889999999999999999999999999999999999987665678997799


Q ss_pred             eEEEEEeeeCCCcCCCCCccccCCCCCCeEEEEeEEEEec---C----------Cchhcc----CCCHHHHHHHHHHhhC
Q 047166          163 MRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDG---S----------RAWLLQ----QMDSTNQRRLYWVRKN  225 (249)
Q Consensus       163 m~l~lnlw~gg~Wat~GG~~~~d~~~~P~~~~~~~~~v~~---~----------~~~~~~----~~~~~~~~~~~~~~~~  225 (249)
                      |+|+||||+||+|+++||++++||.++||+|+|+.+++.+   +          ..||++    +|++.|+++|+|||+|
T Consensus       173 ~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  252 (278)
T 1umz_A          173 MKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQK  252 (278)
T ss_dssp             BEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHH
T ss_pred             eEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCccCCCcccccccCccccCCHHHHHHHHHHHHC
Confidence            9999999999999999998889999999999999999985   1          247775    7999999999999999


Q ss_pred             CeeeecccCCCCCCCCCCCCCc
Q 047166          226 HMIYNYCTDTKRFPQGFPKECA  247 (249)
Q Consensus       226 ~~~y~yc~d~~r~~~~~~~ec~  247 (249)
                      |||||||.|++|||. +||||.
T Consensus       253 ~~~y~yc~d~~r~~~-~~~ec~  273 (278)
T 1umz_A          253 YTIYNYCTDRSRYPS-MPPECK  273 (278)
T ss_dssp             TEEEEGGGCTTTCSS-CCTHHH
T ss_pred             CeEEecCCCCCcCCC-CCcccC
Confidence            999999999999998 899995
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Back     alignment and structure
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Back     alignment and structure
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* Back     alignment and structure
>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 249
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-102
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 3e-40
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 1e-25
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 2e-22
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 2e-11
d1o4ya_270 b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivo 9e-08
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 9e-04
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  296 bits (758), Expect = e-102
 Identities = 145/261 (55%), Positives = 173/261 (66%), Gaps = 18/261 (6%)

Query: 6   NFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAG 65
            F   +  TW     K FN G  + L+LD+Y+G+GFQSK  +LFG   MQ+KLVP +SAG
Sbjct: 5   AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 64

Query: 66  TVTAYYLRSQGPTWDEIDFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHT 125
           TVTA+YL SQ    DEIDFEFLGN +G PY + TNV++ GKGDREQ+ +LWFDP   FH 
Sbjct: 65  TVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHY 124

Query: 126 YSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQPMRIYSSLWNADDWATRGGLIKTD 185
           YSVLWN   IVF VD +PIR FKN + +GV FP NQPM+IYSSLWNADDWATRGGL KTD
Sbjct: 125 YSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTD 184

Query: 186 WSQAPFTASYRNFKVDGSRA-----------------WLLQQMDSTNQRRLYWVRKNHMI 228
           WS+APF ASYR+F +DG  A                    Q +D+   RRL WVR+ + I
Sbjct: 185 WSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTI 244

Query: 229 YNYCTDTKRFPQGFPKECAVH 249
           YNYCTD  R+P   P EC   
Sbjct: 245 YNYCTDRSRYP-SMPPECKRD 264
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Length = 270 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 100.0
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 100.0
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.98
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.97
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 96.63
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 96.17
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 95.67
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 95.07
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 95.04
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 93.01
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 92.23
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 92.06
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 88.88
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 84.45
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 82.83
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=3.7e-75  Score=513.44  Aligned_cols=245  Identities=59%  Similarity=1.058  Sum_probs=231.3

Q ss_pred             ccccccccceeeecCCCeEEecCCcEEEEEEecCCCCeEEEccceEeEEEEEEEEecCCCCCceEEEEEEeecCCCCCeE
Q 047166            3 SAGNFNEEFDITWGDGRGKIFNNGQLLTLNLDRYSGSGFQSKKQHLFGKIDMQLKLVPRNSAGTVTAYYLRSQGPTWDEI   82 (249)
Q Consensus         3 ~~~~~~~~~~~~~~~~nv~~~~~G~~l~L~l~~~sG~~i~Sk~~~~YG~~eariKlp~g~s~G~~~AFwl~~~~~~~~EI   82 (249)
                      ...+|+++|.++|+++||++.++|..|+|+|++.+|++|+||+.|+||+||||||||+|+++|++++|||.+.++.++||
T Consensus         2 ~~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~~dEI   81 (267)
T d1umza_           2 VDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEI   81 (267)
T ss_dssp             CCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEE
T ss_pred             ccccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCCCCeE
Confidence            35789999999999999999999999999999999999999999999999999999999888999999999988999999


Q ss_pred             EEEecCCCCCCceEEEeeeeeCCCCCcceEEEcCCCCCCCcEEEEEEEcCCcEEEEECCeeEEEEeecccCCcCCCCCCc
Q 047166           83 DFEFLGNLSGHPYTVHTNVYSQGKGDREQQFHLWFDPAVNFHTYSVLWNPQRIVFSVDGIPIREFKNLEAIGVPFPKNQP  162 (249)
Q Consensus        83 DiE~lG~~~g~~~~~~tn~~~~g~~~~~~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVDG~~v~~~~~~~~~~~~~P~~~P  162 (249)
                      |||++|+..++++++|+|+|.++.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+..+.++|.++|
T Consensus        82 DiE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~p  161 (267)
T d1umza_          82 DFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQP  161 (267)
T ss_dssp             EEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSC
T ss_pred             EEEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcceE
Confidence            99999999889999999999999999999999999999999999999999999999999999999998877888998899


Q ss_pred             eEEEEEeeeCCCcCCCCCccccCCCCCCeEEEEeEEEEec-------------CCchhcc----CCCHHHHHHHHHHhhC
Q 047166          163 MRIYSSLWNADDWATRGGLIKTDWSQAPFTASYRNFKVDG-------------SRAWLLQ----QMDSTNQRRLYWVRKN  225 (249)
Q Consensus       163 m~l~lnlw~gg~Wat~GG~~~~d~~~~P~~~~~~~~~v~~-------------~~~~~~~----~~~~~~~~~~~~~~~~  225 (249)
                      |+|++|||+||+|||+||++++||+.+||+|.|++|+|.+             ...||++    +|+..|+++|+|||++
T Consensus       162 m~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  241 (267)
T d1umza_         162 MKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQK  241 (267)
T ss_dssp             BEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHH
T ss_pred             EEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccCCCCCccccccccccCCHHHHHHHHHHHHC
Confidence            9999999999999999999999999999999999999987             1247664    7999999999999999


Q ss_pred             CeeeecccCCCCCCCCCCCCCcC
Q 047166          226 HMIYNYCTDTKRFPQGFPKECAV  248 (249)
Q Consensus       226 ~~~y~yc~d~~r~~~~~~~ec~~  248 (249)
                      ||+||||.|++|||. +||||.+
T Consensus       242 ~~~y~yC~d~~r~~~-~p~EC~~  263 (267)
T d1umza_         242 YTIYNYCTDRSRYPS-MPPECKR  263 (267)
T ss_dssp             TEEEEGGGCTTTCSS-CCTHHHH
T ss_pred             CcEEccCCCCCcCCC-CCcccCC
Confidence            999999999999996 8999963
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure