Citrus Sinensis ID: 047179

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MDSKRSIWITVFLSINIISFALVSGCNTCVQPRPIPNPNPNPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFICA
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHcccccHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHcHHHHHHHHHHHHHHHccccEcccHHHHHHHHHcccccccccEcc
Coil and Loop (DISEMBL)
MDSKRSIWITVFLSINIISFALVsgcntcvqprpipnpnpnptsrrcprdalklgvcakvldgtvgavvgnppdfpccsvLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTcgkklpsdfica
Flexible Loop (DISEMBL)
MDSKRSIWITVFLSINIISFALVSGCNTCVQPrpipnpnpnptsrrCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGkklpsdfica
Low Complexity Region (SEG)
MDSKRSIWITVFLSINIISFALVSGCNTCVQprpipnpnpnptsrrcprDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAnilgininipislsllinTCGKKLPSDFICA
Disordered region (IsUnstruct)
*****SIWITVFLSINIISFALVSGCNTCVQ******************DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFI**
Disordered Region (DISOPRED)
*****SI*ITVFLSINIISFALVSGCN***********************ALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFICA
Disordered Region (DISEMBL)
MDSKRSIWITVFLSINIISFALVSGCNTCVQPRPIPNPNPNPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFICA
Disordered Region (DISPRO)
****RSIWITVFLSINIISFALVSGCNTCVQPRPIPN*******RRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFICA
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDSKRSIWITVFLSINIISFALVSGCNTCVQPRPIPNPNPNPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFICA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
P14009	137	14 kDa proline-rich prote	N/A	no	0.992	0.941	0.551	2e-30
Q8RW93	128	Putative lipid-binding pr	no	no	0.738	0.75	0.510	4e-22
Q01595	129	Cortical cell-delineating	N/A	no	0.646	0.651	0.586	9e-20
Q00451	346	36.4 kDa proline-rich pro	N/A	no	0.638	0.239	0.518	7e-14
P24337	80	Hydrophobic seed protein	no	no	0.523	0.85	0.389	3e-06

>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/136 (55%), Positives = 99/136 (72%), Gaps = 7/136 (5%)

Query: 1   MDSKRSIWITVFLSINIISFALVSGCNTC-------VQPRPIPNPNPNPTSRRCPRDALK 53
           M SK S  + +F ++NI+ FALVS    C        +P P P P P P++ +CPRDALK
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALK 60

Query: 54  LGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLS 113
           LGVCA VL+     V+G+PP  PCCS+L+GL++LEAAVCLCTAIKANILG N+N+PI+LS
Sbjct: 61  LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALS 120

Query: 114 LLINTCGKKLPSDFIC 129
           L++N CGK++P+ F C
Sbjct: 121 LVLNNCGKQVPNGFEC 136

May be connected with the initiation of embryogenesis or with the metabolic changes produced by the removal of auxins.
Daucus carota (taxid: 4039)

>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE=2 SV=1

 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 50/98 (51%), Positives = 68/98 (69%), Gaps = 2/98 (2%)

Query: 33  RPIPNPNPNPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVC 92
           +P P P     + +CPRD LK GVC   L G V  V+G PP   CCS+++GL D EAAVC
Sbjct: 32  KPCPPPPAKQATTKCPRDTLKFGVCGSWL-GLVSEVIGTPPSQECCSLIKGLADFEAAVC 90

Query: 93  LCTAIKANILGIN-INIPISLSLLINTCGKKLPSDFIC 129
           LCTA+K +ILG+  + IP++L+LL+N+CGK +P  F+C
Sbjct: 91  LCTALKTSILGVAPVKIPVALTLLLNSCGKNVPQGFVC 128

Arabidopsis thaliana (taxid: 3702)

>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1

 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 3/87 (3%)

Query: 43  TSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANIL 102
           +  RCP DALKL VCAKVL G V   VG P    CC +L+GL+DL+AA+CLCTAIKAN+L
Sbjct: 44  SHGRCPIDALKLKVCAKVL-GLVK--VGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVL 100

Query: 103 GININIPISLSLLINTCGKKLPSDFIC 129
           GI++N+P+SL+ ++N CG+  P DF C
Sbjct: 101 GIHLNVPLSLNFILNNCGRICPEDFTC 127

Delineates a novel subset of developing cortical cells. It is probably involved in some aspect of transport of molecules to or from the vasculature.

Zea mays (taxid: 4577)

>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 55/83 (66%)

Query: 47  CPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGINI 106
           CP DALKLG C  VL G +   +G      CC +L GL+DL+AA+CLCT I+  +L INI
Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINI 320

Query: 107 NIPISLSLLINTCGKKLPSDFIC 129
            +PI+L +LI+ CGK  P DF C
Sbjct: 321 ILPIALQVLIDDCGKYPPKDFKC 343

Solanum lycopersicum (taxid: 4081)

>sp|P24337|HPSE_SOYBN Hydrophobic seed protein OS=Glycine max PE=1 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 9/77 (11%)

Query: 53  KLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISL 112
            L +C  +L G++G V        CC+++ GL D+EA VCLC  ++A  LGI +N+  +L
Sbjct: 10  DLSICLNILGGSLGTV------DDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNL 60

Query: 113 SLLINTCGKKLPSDFIC 129
            L++N+CG+  PS+  C
Sbjct: 61  QLILNSCGRSYPSNATC 77

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
351726576	135	uncharacterized protein LOC100527818 pre	0.992	0.955	0.656	7e-43
351721960	137	uncharacterized protein LOC100305616 pre	0.984	0.934	0.649	2e-42
186478400	132	Bifunctional inhibitor/lipid-transfer pr	0.923	0.909	0.737	4e-41
225427033	133	PREDICTED: 14 kDa proline-rich protein D	1.0	0.977	0.661	9e-40
224125176	115	predicted protein [Populus trichocarpa]	0.853	0.965	0.849	2e-39
3157922	115	Contains similarity to proline-rich prot	0.853	0.965	0.769	2e-38
225427031	132	PREDICTED: 14 kDa proline-rich protein D	1.0	0.984	0.651	2e-34
449466207	136	PREDICTED: 14 kDa proline-rich protein D	1.0	0.955	0.632	5e-33
357476921	134	14 kDa proline-rich protein DC2.15 [Medi	1.0	0.970	0.589	1e-31
148562441	142	lipid transfer protein [Capsicum annuum]	0.992	0.908	0.557	4e-31

>gi|351726576|ref|NP_001237899.1| uncharacterized protein LOC100527818 precursor [Glycine max] gi|255633300|gb|ACU17007.1| unknown [Glycine max]

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 108/134 (80%), Gaps = 5/134 (3%)

Query: 1   MDSKR-SIWITVFLSINIISFALVSGCNTCVQPRP----IPNPNPNPTSRRCPRDALKLG 55
           M+S R S  + +FL+IN++ F + SGC TC QP+P     P PNP+P ++ CPRDALKLG
Sbjct: 1   MESSRTSTTLALFLTINLLFFVMASGCYTCTQPKPNPIPFPYPNPSPAAKSCPRDALKLG 60

Query: 56  VCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLL 115
           VCA VL+G +GA+VG+PPD PCCSVL+GLLDLE AVCLCTAIKANILGIN+NIPISLSL+
Sbjct: 61  VCANVLNGPIGAIVGSPPDHPCCSVLEGLLDLEVAVCLCTAIKANILGINLNIPISLSLI 120

Query: 116 INTCGKKLPSDFIC 129
           +N C K  PSDF+C
Sbjct: 121 LNACEKSPPSDFLC 134

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721960|ref|NP_001237995.1| uncharacterized protein LOC100305616 precursor [Glycine max] gi|255626095|gb|ACU13392.1| unknown [Glycine max]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 106/134 (79%), Gaps = 6/134 (4%)

Query: 2   DSKRSIWITVFLSINIISFALVSGCNTCVQPRP------IPNPNPNPTSRRCPRDALKLG 55
            S  S  + +FL+IN++ F + SGC TC QP+P       P PNP+PT++ CPRDALKLG
Sbjct: 3   SSGPSTTLALFLTINLLVFVMASGCYTCTQPKPNPSPNPFPYPNPSPTAKSCPRDALKLG 62

Query: 56  VCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLL 115
           VCA VL+G +GA+VG+PPD PCCSVL+GLLDLE AVCLCTAIKANILGIN+NIPISLSL+
Sbjct: 63  VCANVLNGPIGAIVGSPPDHPCCSVLEGLLDLEVAVCLCTAIKANILGINLNIPISLSLI 122

Query: 116 INTCGKKLPSDFIC 129
           +N C K  PSDF+C
Sbjct: 123 LNACEKSPPSDFLC 136

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186478400|ref|NP_172674.2| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana] gi|332190716|gb|AEE28837.1| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 102/122 (83%), Gaps = 2/122 (1%)

Query: 11  VFLSINIISFALVSGCNTCVQPRPIPNPNP--NPTSRRCPRDALKLGVCAKVLDGTVGAV 68
           +F+S N++ FA VSGCNTC  P PIPN NP  NPT+  C RDA+KLGVCAK+LD  VG V
Sbjct: 11  LFISFNLMFFAHVSGCNTCFPPTPIPNLNPISNPTTPSCSRDAIKLGVCAKILDVAVGTV 70

Query: 69  VGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFI 128
           +GNP D  CCSVLQGL+DL+AAVCLCT IKANILGINI++PISLSLLINTCGKKLPSD I
Sbjct: 71  IGNPSDTLCCSVLQGLVDLDAAVCLCTTIKANILGINIDLPISLSLLINTCGKKLPSDCI 130

Query: 129 CA 130
           CA
Sbjct: 131 CA 132

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427033|ref|XP_002271619.1| PREDICTED: 14 kDa proline-rich protein DC2.15 [Vitis vinifera]

 Score =  167 bits (424), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 101/133 (75%), Gaps = 3/133 (2%)

Query: 1   MDSKRSIWITVFLSINIISFALVSGCNTCVQPRP---IPNPNPNPTSRRCPRDALKLGVC 57
           MDSK +    +FLSIN++ FALVSGC+TC QP+          NP S  CP DALKLGVC
Sbjct: 1   MDSKSTSSAALFLSINLVLFALVSGCDTCPQPKSKPTPTPTPANPNSGSCPIDALKLGVC 60

Query: 58  AKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLIN 117
           A VL G VG V+G PPD PCC++L GLLDLEAA+CLCTAIKANILGIN++I +SLSLLIN
Sbjct: 61  ANVLSGLVGVVIGTPPDTPCCALLDGLLDLEAAICLCTAIKANILGINLDIHLSLSLLIN 120

Query: 118 TCGKKLPSDFICA 130
           TCGK LP DF CA
Sbjct: 121 TCGKTLPKDFQCA 133

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125176|ref|XP_002329912.1| predicted protein [Populus trichocarpa] gi|222871149|gb|EEF08280.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/113 (84%), Positives = 104/113 (92%), Gaps = 2/113 (1%)

Query: 20  FALVSGCNTCVQPRPIPNPNPNPTSRR--CPRDALKLGVCAKVLDGTVGAVVGNPPDFPC 77
           FAL SGCNTCVQP+PIPNPNPNP   R  CPRDALKLGVCAK+L+G +G VVG+PPD PC
Sbjct: 3   FALASGCNTCVQPKPIPNPNPNPIISRNSCPRDALKLGVCAKLLNGAIGGVVGSPPDTPC 62

Query: 78  CSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFICA 130
           C+VLQGL+DLEAAVCLCTAIKANILGINI+IPISLSLLINTCGKKLPSDFICA
Sbjct: 63  CTVLQGLVDLEAAVCLCTAIKANILGINIDIPISLSLLINTCGKKLPSDFICA 115

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3157922|gb|AAC17605.1| Contains similarity to proline-rich protein, gb|S68113 from Brassica napus [Arabidopsis thaliana]

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/113 (76%), Positives = 95/113 (84%), Gaps = 2/113 (1%)

Query: 20  FALVSGCNTCVQPRPIPNPNP--NPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPC 77
           FA VSGCNTC  P PIPN NP  NPT+  C RDA+KLGVCAK+LD  VG V+GNP D  C
Sbjct: 3   FAHVSGCNTCFPPTPIPNLNPISNPTTPSCSRDAIKLGVCAKILDVAVGTVIGNPSDTLC 62

Query: 78  CSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFICA 130
           CSVLQGL+DL+AAVCLCT IKANILGINI++PISLSLLINTCGKKLPSD ICA
Sbjct: 63  CSVLQGLVDLDAAVCLCTTIKANILGINIDLPISLSLLINTCGKKLPSDCICA 115

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427031|ref|XP_002271593.1| PREDICTED: 14 kDa proline-rich protein DC2.15 [Vitis vinifera] gi|147854118|emb|CAN80709.1| hypothetical protein VITISV_033376 [Vitis vinifera] gi|297741172|emb|CBI31903.3| unnamed protein product [Vitis vinifera]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/132 (65%), Positives = 103/132 (78%), Gaps = 2/132 (1%)

Query: 1   MDSKRSIWITVFLSINIISFALVSG--CNTCVQPRPIPNPNPNPTSRRCPRDALKLGVCA 58
           MDSK S    +FLSIN++ FALVS     +  +P P P+    P++  CPRDALKLGVCA
Sbjct: 1   MDSKGSSSAALFLSINLLFFALVSANKPCSPPKPTPTPSTPSTPSNGSCPRDALKLGVCA 60

Query: 59  KVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINT 118
           K+L+GTVGAVVG PP  PCCS+L+GLLDLE A CLCTAIKANILGI+++IP+SLSLL+N 
Sbjct: 61  KLLNGTVGAVVGTPPVTPCCSLLEGLLDLEVAACLCTAIKANILGIHLDIPVSLSLLVNI 120

Query: 119 CGKKLPSDFICA 130
           CGKKLP DF CA
Sbjct: 121 CGKKLPKDFQCA 132

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466207|ref|XP_004150818.1| PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus] gi|449510380|ref|XP_004163648.1| PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 105/136 (77%), Gaps = 6/136 (4%)

Query: 1   MDSKRSIWITVFLSINIISFALVSGCNTC------VQPRPIPNPNPNPTSRRCPRDALKL 54
           MDSKR    T+FL +N++ FA V+ C+ C        P+P PNPNP P  + CPRDALKL
Sbjct: 1   MDSKRISNATIFLVLNLVFFAFVNVCHACNDPKPKPTPKPYPNPNPTPVVKSCPRDALKL 60

Query: 55  GVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSL 114
           GVC K+L+G V A+VG+ P+  CCS+L GL+DLEAAVCLCTAIKAN+LGININIPISLSL
Sbjct: 61  GVCTKLLNGPVSALVGSLPNTQCCSLLDGLIDLEAAVCLCTAIKANVLGININIPISLSL 120

Query: 115 LINTCGKKLPSDFICA 130
           L+N CGKK+PS+F CA
Sbjct: 121 LVNVCGKKVPSEFQCA 136

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476921|ref|XP_003608746.1| 14 kDa proline-rich protein DC2.15 [Medicago truncatula] gi|355509801|gb|AES90943.1| 14 kDa proline-rich protein DC2.15 [Medicago truncatula] gi|388497150|gb|AFK36641.1| unknown [Medicago truncatula]

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/134 (58%), Positives = 105/134 (78%), Gaps = 4/134 (2%)

Query: 1   MDSKRSIWITVFLSINIISFALVSGCNTCVQPRPIPNPNPNP----TSRRCPRDALKLGV 56
           M+S +S  + +F  IN++ FA+ +GC  C +P P PNP P P    +++ CPRDALKLGV
Sbjct: 1   MNSSKSSTLVLFSIINMLFFAMANGCFFCPKPNPNPNPFPYPNPSPSTKSCPRDALKLGV 60

Query: 57  CAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLI 116
           CA +L+G +GAV+G+PP+ PCCS+L+GL+DLE AVCLCTAIKANILGI+INIPISLSL++
Sbjct: 61  CANLLNGPIGAVIGSPPEHPCCSILEGLVDLEVAVCLCTAIKANILGIDINIPISLSLIL 120

Query: 117 NTCGKKLPSDFICA 130
           N C K  P+DF C+
Sbjct: 121 NACEKTPPTDFQCS 134

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148562441|gb|ABQ88334.1| lipid transfer protein [Capsicum annuum]

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/140 (55%), Positives = 102/140 (72%), Gaps = 11/140 (7%)

Query: 1   MDSKRSIWITVFLSINIISFALVSGCNTCVQPRPIPNPNPNP-----------TSRRCPR 49
           M SK++  + +F+ +N++ F+LVS C TC  P+P P P P P           +  +CP 
Sbjct: 1   MASKKTTTLALFILVNLLFFSLVSACGTCPSPKPKPKPKPKPTPTPKPTPSPGSKGKCPV 60

Query: 50  DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIP 109
           DALKLG+CA VL   +G V+GNPP  PCCS++QGL+DLEAA+CLCTA+KANILGIN+N+P
Sbjct: 61  DALKLGICANVLGNLLGVVLGNPPKKPCCSLIQGLVDLEAALCLCTALKANILGINLNVP 120

Query: 110 ISLSLLINTCGKKLPSDFIC 129
           ISLSLL+N CGKK+PS F C
Sbjct: 121 ISLSLLLNVCGKKVPSGFQC 140

Source: Capsicum annuum

Species: Capsicum annuum

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
TAIR|locus:2201976	132	AT1G12100 [Arabidopsis thalian	0.923	0.909	0.508	6.6e-26
TAIR|locus:2135625	182	AT4G12490 [Arabidopsis thalian	0.623	0.445	0.469	8.4e-21
TAIR|locus:2203886	149	AT1G62510 [Arabidopsis thalian	0.615	0.536	0.487	1.7e-20
TAIR|locus:2135635	177	AT4G12500 [Arabidopsis thalian	0.623	0.457	0.469	5.8e-20
TAIR|locus:2135545	129	AT4G12510 [Arabidopsis thalian	0.984	0.992	0.404	1.5e-19
TAIR|locus:2135555	129	AT4G12520 [Arabidopsis thalian	0.984	0.992	0.404	1.5e-19
TAIR|locus:2135610	168	EARLI1 "EARLY ARABIDOPSIS ALUM	0.623	0.482	0.444	1.5e-19
TAIR|locus:2135595	161	AZI1 "azelaic acid induced 1"	0.623	0.503	0.444	1.3e-18
TAIR|locus:2008880	137	ELP "extensin-like protein" [A	0.930	0.883	0.356	2.5e-17
TAIR|locus:2050901	134	AT2G45180 [Arabidopsis thalian	0.615	0.597	0.518	1.4e-16

TAIR|locus:2201976 AT1G12100 [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 62/122 (50%), Positives = 71/122 (58%)

Query:    11 VFLSINIISFALVSGCNTCVQXXXXXXXXXXX--XXXXXXXDALKLGVCAKVLDGTVGAV 68
             +F+S N++ FA VSGCNTC                      DA+KLGVCAK+LD  VG V
Sbjct:    11 LFISFNLMFFAHVSGCNTCFPPTPIPNLNPISNPTTPSCSRDAIKLGVCAKILDVAVGTV 70

Query:    69 VGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXXXXXXXXXXTCGKKLPSDFI 128
             +GNP D  CCSVLQGL+DL+AAVCLCT IKA                  TCGKKLPSD I
Sbjct:    71 IGNPSDTLCCSVLQGLVDLDAAVCLCTTIKANILGINIDLPISLSLLINTCGKKLPSDCI 130

Query:   129 CA 130
             CA
Sbjct:   131 CA 132

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135625 AT4G12490 [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
 Identities = 38/81 (46%), Positives = 50/81 (61%)

Query:    50 DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXX 109
             DAL+LGVCA VL G +   +G P   PCCS++QGL+DL+AAVCLCTA++A          
Sbjct:   102 DALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVP 161

Query:   110 XXXXXXXXTCGKKLPSDFICA 130
                      C ++LPS+F CA
Sbjct:   162 ISLSVLLNVCNRRLPSNFQCA 182

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0050832 "defense response to fungus" evidence=IMP

TAIR|locus:2203886 AT1G62510 [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 39/80 (48%), Positives = 47/80 (58%)

Query:    50 DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXX 109
             DALKLGVCA VL+G +   +G PP  PCC+++QGL DLEAA CLCTA+KA          
Sbjct:    70 DALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKANILGINLNIP 129

Query:   110 XXXXXXXXTCGKKLPSDFIC 129
                      C KK+P  F C
Sbjct:   130 LSLSLLLNVCSKKVPRGFQC 149

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135635 AT4G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 38/81 (46%), Positives = 50/81 (61%)

Query:    50 DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXX 109
             DAL+LGVCA VL G +   +G P   PCCS++QGL+DL+AA+CLCTA++A          
Sbjct:    97 DALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVP 156

Query:   110 XXXXXXXXTCGKKLPSDFICA 130
                      C ++LPSDF CA
Sbjct:   157 ISLSVLLNVCNRRLPSDFQCA 177

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135545 AT4G12510 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 53/131 (40%), Positives = 65/131 (49%)

Query:     1 MDSKRSIWITVFLSINIISFALVSGCNT-CVQXXXXXXXXXXXXXXXXXXDALKLGVCAK 59
             M SK S  + +FL+ NI+ F L + C   C                    D LKLGVCA 
Sbjct:     1 MASKISASLVIFLTFNILFFTLTTACGGGC--SSTPKPKPKPKSTGSCPKDTLKLGVCAN 58

Query:    60 VLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXXXXXXXXXXTC 119
             VL   +   +G PP  PCCS+L GL+DLEAA CLCTA+KA                   C
Sbjct:    59 VLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLSLLLNVC 118

Query:   120 GKKLPSDFICA 130
             GKK+PS F+CA
Sbjct:   119 GKKVPSGFVCA 129

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135555 AT4G12520 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 53/131 (40%), Positives = 65/131 (49%)

Query:     1 MDSKRSIWITVFLSINIISFALVSGCNT-CVQXXXXXXXXXXXXXXXXXXDALKLGVCAK 59
             M SK S  + +FL+ NI+ F L + C   C                    D LKLGVCA 
Sbjct:     1 MASKISASLVIFLTFNILFFTLTTACGGGC--SSTPKPKPKPKSTGSCPKDTLKLGVCAN 58

Query:    60 VLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXXXXXXXXXXTC 119
             VL   +   +G PP  PCCS+L GL+DLEAA CLCTA+KA                   C
Sbjct:    59 VLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLSLLLNVC 118

Query:   120 GKKLPSDFICA 130
             GKK+PS F+CA
Sbjct:   119 GKKVPSGFVCA 129

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

TAIR|locus:2135610 EARLI1 "EARLY ARABIDOPSIS ALUMINUM INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
 Identities = 36/81 (44%), Positives = 48/81 (59%)

Query:    50 DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXX 109
             DAL+LGVCA VL   +   +G P   PCCS++QGL+DL+AA+CLCTA++A          
Sbjct:    88 DALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVP 147

Query:   110 XXXXXXXXTCGKKLPSDFICA 130
                      C +K+PS F CA
Sbjct:   148 ISLSVLLNVCNRKVPSGFQCA 168

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0009409 "response to cold" evidence=RCA;IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2135595 AZI1 "azelaic acid induced 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 36/81 (44%), Positives = 47/81 (58%)

Query:    50 DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXX 109
             DALKLGVCA VL   +   +G P    CCS++QGL+D++AA+CLCTA++A          
Sbjct:    81 DALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDAAICLCTALRANVLGINLNVP 140

Query:   110 XXXXXXXXTCGKKLPSDFICA 130
                      C +KLPS F CA
Sbjct:   141 ISLSVLLNVCNRKLPSGFQCA 161

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0009627 "systemic acquired resistance" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2008880 ELP "extensin-like protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 47/132 (35%), Positives = 63/132 (47%)

Query:     9 ITVFLSINIISFALVSGCNTCV-----------QXXXXXXXXXXXXXXXXXXDALKLGVC 57
             I +FL++N++ F  +S C +C            +                  D LKLGVC
Sbjct:     6 IALFLALNLLFFTTISACGSCTPCGGGCPSPKPKPTPKPTPSPSSGSSKCPKDTLKLGVC 65

Query:    58 AKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXXXXXXXXXX 117
             A VL+G +   +G PP  PCCS++QGL D+EAAVCLCTA+KA                  
Sbjct:    66 ANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGINLNLPISLSLLLN 125

Query:   118 TCGKKLPSDFIC 129
              C K+LP  F C
Sbjct:   126 VCSKQLPPGFQC 137

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2050901 AT2G45180 [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 42/81 (51%), Positives = 50/81 (61%)

Query:    50 DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKAXXXXXXXXXX 109
             D LKLGVCA +L G V  VVG+PP  PCC++LQGL +LEAAVCLCTA+KA          
Sbjct:    55 DTLKLGVCADLL-GLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLGINLNVP 113

Query:   110 XXXXXXXXTCGKKLPSDFICA 130
                      CGKK+P  F C+
Sbjct:   114 IDLTLLLNYCGKKVPHGFQCS 134

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P14009	14KD_DAUCA	No assigned EC number	0.5514	0.9923	0.9416	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT1G12100	lipid binding; lipid binding; FUNCTIONS IN- lipid binding; INVOLVED IN- lipid transport; LOCATED IN- endomembrane system; EXPRESSED IN- shoot apex, embryo, flower, seed, leaf; EXPRESSED DURING- petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612), Plant lipid transfer protein and hydrophobic protein, helical (InterPro-IPR013770); BEST Arabidopsis thaliana protei [...] (132 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT4G38250	amino acid transporter family protein; amino acid transporter family protein; FUNCTIONS IN- ami [...] (436 aa)							•		0.671
	NRT1.5	NRT1.5 (NITRATE TRANSPORTER 1.5); nitrate transmembrane transporter/ transporter; Transmembrane [...] (614 aa)							•		0.659
	NRT1.1	NRT1.1; nitrate transmembrane transporter/ transporter; Encodes NRT1.1 (CHL1), a dual-affinity [...] (590 aa)							•		0.409
	ATNRT2:1	ATNRT2-1 (NITRATE TRANSPORTER 2-1); nitrate transmembrane transporter; High-affinity nitrate tr [...] (530 aa)							•		0.407
	CAT5	CAT5 (CATIONIC AMINO ACID TRANSPORTER 5); L-glutamate transmembrane transporter/ L-lysine trans [...] (569 aa)							•		0.406

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	130
cd01958	85	cd01958, HPS_like, HPS_like: Hydrophobic Protein f	2e-28
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	7e-13
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	2e-04

>gnl|CDD|238924 cd01958, HPS_like, HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

 Score = 98.9 bits (247), Expect = 2e-28
 Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 1/84 (1%)

Query: 46  RCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGIN 105
            CPRDALKLGVCA VL G    ++G P   PCC ++ GL DL+AAVCLCTAIKANILGI+
Sbjct: 3   TCPRDALKLGVCANVL-GLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGIS 61

Query: 106 INIPISLSLLINTCGKKLPSDFIC 129
           INIP++LSLL+N+CG+ +P  F C
Sbjct: 62  INIPVALSLLLNSCGRNVPPGFTC 85

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset of cortical cells. Length = 85

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 59.1 bits (143), Expect = 7e-13
 Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 47  CPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGINI 106
           C +  LKL  CA  L G             CCS L+ L     A C CTAI+A +LGI  
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQVPSQ-----QCCSQLRQL----QAQCRCTAIRAIVLGIEG 51

Query: 107 NIPISLSLLINTCGKKLPSDFIC 129
             P + + L + CG  +P    C
Sbjct: 52  INPQAAASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 9/82 (10%)

Query: 47  CPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGINI 106
           C +  L+L  C   L   VG   G PP   CCS L+GL     A C C A++A +LGI  
Sbjct: 1   CGQVLLQLAPCLSYL---VGGSRGAPPSQQCCSQLRGLNS---AQCRCLALRAAVLGILE 54

Query: 107 N---IPISLSLLINTCGKKLPS 125
                  + + L + CG   P 
Sbjct: 55  IPGLNAQNAASLPSACGVPPPY 76

Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	100.0
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	100.0
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	96.7
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	96.61
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	96.35
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	95.95
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	94.43
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	93.99
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	91.14
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	86.76

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=100.00  E-value=5.1e-38  Score=221.17  Aligned_cols=84  Identities=63%  Similarity=1.197  Sum_probs=82.1

Q ss_pred             CCCCcccccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCC
Q 047179           45 RRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        45 ~~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P  124 (130)
                      ++||+|++|||+|+|||+ ++++.+|+++.++||++|+||+|+|||+|||||||+|++||++|+|+++++++|.|||++|
T Consensus         2 ~~CP~dalkLgvCanvL~-l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi~~~~pv~l~llln~CGk~~P   80 (85)
T cd01958           2 PTCPRDALKLGVCANVLG-LSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGISINIPVALSLLLNSCGRNVP   80 (85)
T ss_pred             CCCCcchHHhchhHhhhh-ccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCcccccChhHHHHHHHHcCcCC
Confidence            589999999999999996 8899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcc
Q 047179          125 SDFIC  129 (130)
Q Consensus       125 ~gf~C  129 (130)
                      +||+|
T Consensus        81 ~gf~C   85 (85)
T cd01958          81 PGFTC   85 (85)
T ss_pred             CCCcC
Confidence            99998

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=100.00  E-value=6.3e-37  Score=215.44  Aligned_cols=84  Identities=70%  Similarity=1.340  Sum_probs=82.1

Q ss_pred             CCCcccccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhcc-ccccccchhhhhhhhcCCCCC
Q 047179           46 RCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILG-ININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        46 ~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlg-i~~~ipv~l~~lln~Cgk~~P  124 (130)
                      +||+|++||++|+||| |++++.+|.|++++||++|+||+|+|||+|||+|+|+|++| |++|+|++++++||.|||++|
T Consensus         1 ~CP~d~lkLgvC~~vL-~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~~p   79 (85)
T PF14547_consen    1 TCPRDALKLGVCANVL-GLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKTVP   79 (85)
T ss_pred             CCCCcchhhhhhhhhh-hhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCcCc
Confidence            6999999999999999 59999999999999999999999999999999999999999 899999999999999999999


Q ss_pred             CCCccC
Q 047179          125 SDFICA  130 (130)
Q Consensus       125 ~gf~C~  130 (130)
                      +||+|+
T Consensus        80 ~gf~C~   85 (85)
T PF14547_consen   80 SGFTCP   85 (85)
T ss_pred             CCCcCC
Confidence            999996

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=96.70  E-value=0.00011  Score=50.06  Aligned_cols=57  Identities=32%  Similarity=0.731  Sum_probs=34.3

Q ss_pred             CCCCCCCCcccccCCccchhhHHHHHHHhhhh-ccccccccchhhhhhhhcCCCCCCCCcc
Q 047179           70 GNPPDFPCCSVLQGLLDLEAAVCLCTAIKANI-LGININIPISLSLLINTCGKKLPSDFIC  129 (130)
Q Consensus        70 g~p~~~~CC~li~gL~dldAA~CLCtaikanv-lgi~~~ipv~l~~lln~Cgk~~P~gf~C  129 (130)
                      +..|.++||..++.+.+.| ..|||..++... .++++|..-.+ .|...||...|. ++|
T Consensus        39 ~~~Ps~~CC~~l~~~~~~~-~~ClC~~~~~~~~~~~~in~~~a~-~Lp~~Cg~~~~~-~~C   96 (96)
T PF14368_consen   39 GPAPSAACCSALKSVVQAD-PPCLCQLLNSPGAPGFGINVTRAL-ALPAACGVPVPP-SKC   96 (96)
T ss_dssp             -----HHHHHHHCC----H-CCHHHCCCC-CCHCHHCCTCHHHH-HHHHHCTSS-S-----
T ss_pred             CCCCCHHHHHHHHHhccCC-CCCHHHhcCccccccCCcCHHHHH-HHHHHcCCCCCC-CCC
Confidence            3567789999999997744 899999999987 55566655544 478899999998 887

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=96.61  E-value=0.00045  Score=44.25  Aligned_cols=73  Identities=38%  Similarity=0.705  Sum_probs=49.4

Q ss_pred             cccccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhcccc----ccccchhhhhhhhcCCCCC
Q 047179           49 RDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGIN----INIPISLSLLINTCGKKLP  124 (130)
Q Consensus        49 ~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~----~~ipv~l~~lln~Cgk~~P  124 (130)
                      ....++..|...+.+..   ...++.++||..++++.   ...|+|.+++....++.    ++. .....|.+.||...|
T Consensus         3 ~~~~~~~~c~~~~~~~~---~~~~p~~~CC~~l~~~~---~~~C~C~~~~~~~~~~~~~~~~~~-~~a~~lp~~C~~~~~   75 (79)
T smart00499        3 QVLLQLAPCLSYLTGGS---PGAPPSQQCCSQLRGLN---SAQCRCLALRAAVLGILEIPGVNA-QNAASLPSACGVPPP   75 (79)
T ss_pred             hhhhhHHhhHHHHcCCC---CCCCCchHHHHHHHHhc---ccCCcchhhhcccccccchhhhhH-HHHHhhHHhcCCCCC
Confidence            33445556776663111   12356688999999887   67799999998877654    243 344568889999887


Q ss_pred             CCCcc
Q 047179          125 SDFIC  129 (130)
Q Consensus       125 ~gf~C  129 (130)
                      . +.|
T Consensus        76 ~-~~C   79 (79)
T smart00499       76 Y-TDC   79 (79)
T ss_pred             C-CCC
Confidence            5 554

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=96.35  E-value=0.00038  Score=46.70  Aligned_cols=62  Identities=29%  Similarity=0.629  Sum_probs=47.1

Q ss_pred             ccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCCC
Q 047179           52 LKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPS  125 (130)
Q Consensus        52 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P~  125 (130)
                      .+|..|.....      .|.+|+.+||..++.     +-.|||.-+|...++.-+|.+-+.. |.+.||..+|.
T Consensus         4 ~~L~~C~~ai~------~~~~Ps~~CC~~Lk~-----~~~CLC~y~~~p~l~~~i~~~~A~~-l~~~Cgv~~P~   65 (66)
T cd01959           4 TQLSPCLPAIL------GGSPPSAACCAKLKE-----QQSCLCQYAKNPSLKQYVNSPNARK-VLAACGVPYPN   65 (66)
T ss_pred             hhcccCHHHHh------CCCCCCHHHHHHHhc-----CCCCeeeeecCccHHhhcCcHHHHH-HHHHcCCCCCC
Confidence            47888887753      356888999999996     2379999998866664466666655 78899999874

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=95.95  E-value=0.001  Score=44.61  Aligned_cols=68  Identities=29%  Similarity=0.551  Sum_probs=46.0

Q ss_pred             ccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCCCCCcc
Q 047179           52 LKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFIC  129 (130)
Q Consensus        52 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P~gf~C  129 (130)
                      .+|..|...+.|-   .-..+|.+.||+-|+.+   |. .|+|..++...+.+ +|..- ...|.+.||..+|. ++|
T Consensus         6 ~~L~~C~~yl~~~---~~~~~Ps~~CC~~vk~~---~~-~C~C~~~~~~~~~~-i~~~~-a~~Lp~~Cgv~~p~-~~C   73 (73)
T cd04660           6 DLLAECQPYVTGP---NPPPPPSRECCAALRRA---DL-PCLCRYKTSLVLQI-IDPDK-AVYLPAKCGLPLPP-SSC   73 (73)
T ss_pred             HHHHHHHHHHcCC---CCCCCCCHHHHHHHHcC---Cc-CCEeeccCCCcccc-cCHHH-HHHHHHHcCCCCCC-CCC
Confidence            4566777766311   00123567899999974   22 39999998876653 55544 44588999999999 988

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=94.43  E-value=0.033  Score=39.87  Aligned_cols=25  Identities=20%  Similarity=0.258  Sum_probs=17.2

Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHhC
Q 047179            1 MDSKRSIWITVFLSINIISFALVSG   25 (130)
Q Consensus         1 MAsk~~~~~al~l~lnll~f~~~s~   25 (130)
                      ||||+...+++||++.||++|-+++
T Consensus         1 MaSK~~llL~l~LA~lLlisSevaa   25 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLISSEVAA   25 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhhhh
Confidence            9999754556667666666666665

Some of them may be involved in resistance to environmental stress [].

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=93.99  E-value=0.0034  Score=42.55  Aligned_cols=67  Identities=27%  Similarity=0.533  Sum_probs=48.1

Q ss_pred             ccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccc-----------cccccchhhhhhhhcC
Q 047179           52 LKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGI-----------NINIPISLSLLINTCG  120 (130)
Q Consensus        52 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi-----------~~~ipv~l~~lln~Cg  120 (130)
                      ..+..|...+.+-.     ..+.++||.-|++|    -..|.|.+||..+.++           .++... ...|.+.||
T Consensus        13 ~~l~~c~~~~~~~~-----~~~~~~CC~~L~~l----~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~-a~~LP~~C~   82 (90)
T PF00234_consen   13 VRLSPCLPYLQGGC-----QQPSQQCCQQLRQL----DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQR-AQNLPSMCN   82 (90)
T ss_dssp             SHHHGGHHHHTTSS-----SHHHHHHHHHHHHH----HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHH-HHHHHHHTT
T ss_pred             ccccccHHHHhccc-----ccchHHHhHHHHHH----hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHH-HHHHHHHCC
Confidence            45677776664211     13457899999988    8899999999998873           455434 455889999


Q ss_pred             CCCCCCCcc
Q 047179          121 KKLPSDFIC  129 (130)
Q Consensus       121 k~~P~gf~C  129 (130)
                      ..+|. |.|
T Consensus        83 v~~~~-~~C   90 (90)
T PF00234_consen   83 VSPPY-TDC   90 (90)
T ss_dssp             SSSSS-S-G
T ss_pred             CCCCC-CCC
Confidence            99887 665

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=91.14  E-value=0.054  Score=34.48  Aligned_cols=48  Identities=27%  Similarity=0.603  Sum_probs=31.7

Q ss_pred             CCCCCCCcccccCCccchhhHHHHHHHhhhhccc-cc-cccchhhhhhhhcC
Q 047179           71 NPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGI-NI-NIPISLSLLINTCG  120 (130)
Q Consensus        71 ~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi-~~-~ipv~l~~lln~Cg  120 (130)
                      ..|.++||.-++.+.+.| ..|||..+|...... .+ |. -....|.+.||
T Consensus        13 ~~Ps~~CC~~l~~~~~~~-~~ClC~~~~~~~~~~~~~~~~-~~a~~LP~~Cg   62 (63)
T cd00010          13 TAPPSDCCSGLKSVVKSD-PKCLCAALNGPGASLLGLKNA-TRALALPAACG   62 (63)
T ss_pred             CCCChHHHHHHHHHHhcC-hhhHHHHHcCccccccCcccH-HHHHhchHhcC
Confidence            356789999999887664 469999999865432 11 22 22344666676

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=86.76  E-value=0.12  Score=35.40  Aligned_cols=67  Identities=30%  Similarity=0.535  Sum_probs=43.0

Q ss_pred             ccccccccccccccccccCCCCCCCCcccccCCccc----hhhHHHHHHHhhhhcccc-ccccchhhhhhhhcCCCCC
Q 047179           52 LKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDL----EAAVCLCTAIKANILGIN-INIPISLSLLINTCGKKLP  124 (130)
Q Consensus        52 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dl----dAA~CLCtaikanvlgi~-~~ipv~l~~lln~Cgk~~P  124 (130)
                      .+|.-|.+.+.|-     +..|..+||.-++.|.+.    +.-.|+|.-+|....++. +|..-++ .|-..||-..|
T Consensus         8 ~~l~~C~~y~~g~-----~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~-~LP~~C~v~~~   79 (89)
T cd01960           8 SLLAPCLGYLTGG-----GPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAA-GLPGKCGVSIP   79 (89)
T ss_pred             hhHHhHHHHHhCC-----CCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHH-hChHhcccCCC
Confidence            4677788777522     135678899999988654    223466666777666554 5544443 47788987754

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	130
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	1e-19

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1 Length = 80

 Score = 76.0 bits (187), Expect = 1e-19
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 9/77 (11%)

Query: 53  KLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISL 112
            L +C  +L G++           CC+++ GL D+EA VCLC  ++A  +   +N+  +L
Sbjct: 10  DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNL 60

Query: 113 SLLINTCGKKLPSDFIC 129
            L++N+CG+  PS+  C
Sbjct: 61  QLILNSCGRSYPSNATC 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	130
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	99.96
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	96.53
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	96.5
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	95.54
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	93.47
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	93.39
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	89.88
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	89.41
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	84.97
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	84.1

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=99.96  E-value=8.9e-32  Score=186.59  Aligned_cols=73  Identities=41%  Similarity=0.986  Sum_probs=66.9

Q ss_pred             CCCCcccccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCC
Q 047179           45 RRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        45 ~~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P  124 (130)
                      ++||    |||+|+|||||.+    |  +.++|||+|+||+|+|||+|||||||  +||| +|+|+++++|+|.|||++|
T Consensus         6 ~~CP----kLgvCanvL~g~~----~--~~~~CC~Ll~GL~dleAAvCLCtaik--~Lgi-lnlpv~L~llln~Cgk~~P   72 (80)
T 1hyp_A            6 PSCP----DLSICLNILGGSL----G--TVDDCCALIGGLGDIEAIVCLCIQLR--ALGI-LNLNRNLQLILNSCGRSYP   72 (80)
T ss_dssp             CCSC----CCGGGGGGGGTCC----T--THHHHHHHHHTSCHHHHHHHHHHHHH--HHTC-SCHHHHHHHHHHHTTCSSC
T ss_pred             CCCC----chhHHHHHhCcCC----C--CCCccchhhhCcchhhhhhhhhhhcc--ccce-eecChhHHHHHHHhCCcCc
Confidence            5899    8999999997543    2  56899999999999999999999999  4899 9999999999999999999


Q ss_pred             CCCccC
Q 047179          125 SDFICA  130 (130)
Q Consensus       125 ~gf~C~  130 (130)
                      +||+|+
T Consensus        73 ~gF~C~   78 (80)
T 1hyp_A           73 SNATCP   78 (80)
T ss_dssp             CCCCCS
T ss_pred             CCCCCC
Confidence            999996

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=96.53  E-value=0.00024  Score=46.38  Aligned_cols=60  Identities=30%  Similarity=0.641  Sum_probs=45.2

Q ss_pred             cccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCC
Q 047179           53 KLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        53 kL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P  124 (130)
                      +|..|...+.      -|.+|..+||.-+++     ...|+|..+|.-.++..||.+.+.+ |...||..+|
T Consensus         6 ~L~pC~~~v~------~~~~Ps~~CC~~lk~-----~~~ClC~~~k~~~~~~~in~~~A~~-Lp~~Cgv~~P   65 (67)
T 1n89_A            6 QLAVCASAIL------SGAKPSGECCGNLRA-----QQGCFCQYAKDPTYGQYIRSPHARD-TLTSCGLAVP   65 (67)
T ss_dssp             TTHHHHHHHT------TCCCCCHHHHHHHHH-----HSSHHHHGGGCSTTHHHHTCHHHHH-HHHHHTSCCS
T ss_pred             hcccCHHHHc------CCCCCCHHHHHhhCC-----CCCCCCccccCcccccccCHHHHHH-HHHHcCCCCC
Confidence            5777877763      244677789999984     4889999999766664566666665 7789999988

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=96.50  E-value=0.00025  Score=46.49  Aligned_cols=60  Identities=32%  Similarity=0.669  Sum_probs=45.4

Q ss_pred             cccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCC
Q 047179           53 KLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        53 kL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P  124 (130)
                      +|..|.+.+.      -|.+|..+||.-+++     ...|+|..+|...++..||.+.+.+ |...||..+|
T Consensus         7 ~L~pC~~~v~------~~~~Ps~~CC~~lk~-----~~~ClC~~~k~~~~~~~in~~~A~~-Lp~~Cgv~~P   66 (69)
T 1l6h_A            7 QLTVCTGAIA------GGARPTAACCSSLRA-----QQGCFCQFAKDPRYGRYVNSPNARK-AVSSCGIALP   66 (69)
T ss_dssp             THHHHHHHHT------TCCSTTHHHHHHHHH-----HHHHHHHHTTCSSHHHHTTTTTGGG-CCCCCSSCSC
T ss_pred             hcccCHHHHc------CCCCCCHHHHHhhCC-----CCCCCCccccCcccccccCHHHHHH-HHHHcCCCCC
Confidence            6778877763      134677789999984     4899999998766655567666666 7789999987

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=95.54  E-value=0.0024  Score=42.19  Aligned_cols=70  Identities=24%  Similarity=0.511  Sum_probs=47.9

Q ss_pred             CCCCcccccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHh---hhhccccccccchhhhhhhhcCC
Q 047179           45 RRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIK---ANILGININIPISLSLLINTCGK  121 (130)
Q Consensus        45 ~~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaik---anvlgi~~~ipv~l~~lln~Cgk  121 (130)
                      ..|-.+..+|..|.+.+.+  . . ..+|...||.-+++ +|   -.|||..++   +.-+||  |...++. |...||.
T Consensus         3 ~~C~~~~~~L~pC~~yv~~--~-~-~~~Ps~~CC~~lk~-~~---~~ClC~~~~~~~~~~~gi--n~~~A~~-LP~~Cgv   71 (77)
T 2rkn_A            3 DLCGMSQDELNECKPAVSK--E-N-PTSPSQPCCTALQH-AD---FACLCGYKNSPWLGSFGV--DPELASA-LPKQCGL   71 (77)
T ss_dssp             CBTTBCHHHHHHHGGGGBS--S-S-CCCCCHHHHHHHTT-CC---HHHHHTTTTCHHHHHHTB--CHHHHHH-HHHHTTC
T ss_pred             chHHhHHHhHhhCHHHHcC--C-C-CCCCCHHHHHHHHh-cC---cCCcCcccCCcchhhcCc--CHHHHHH-HHHHcCC
Confidence            3577777788889887742  0 0 13566789999998 34   389999888   444454  4445544 7889999


Q ss_pred             CCCC
Q 047179          122 KLPS  125 (130)
Q Consensus       122 ~~P~  125 (130)
                      .+|.
T Consensus        72 ~~p~   75 (77)
T 2rkn_A           72 ANAP   75 (77)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            8773

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=93.47  E-value=0.0067  Score=41.42  Aligned_cols=69  Identities=29%  Similarity=0.553  Sum_probs=44.9

Q ss_pred             CCcccccccccccccccccccccCCCCCCCCcccccCCccc-----h-hhHHHHHHHhhhhccc-cccccchhhhhhhhc
Q 047179           47 CPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDL-----E-AAVCLCTAIKANILGI-NINIPISLSLLINTC  119 (130)
Q Consensus        47 CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dl-----d-AA~CLCtaikanvlgi-~~~ipv~l~~lln~C  119 (130)
                      |-....+|..|.+.+.|      |.+|..+||.-+++|.+.     | -+.|+|.  |...-++ .+|...+.. |...|
T Consensus         3 C~~v~~~L~pCl~yv~~------~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~~~~~~~~in~~~A~~-LP~~C   73 (91)
T 1siy_A            3 CGQVQGNLAQCIGFLQK------GGVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KAAAGAVRGINPNNAEA-LPGKC   73 (91)
T ss_dssp             TTTTHHHHHHHHHHHTS------CSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HHHTTCCSSCCHHHHHH-HHHHH
T ss_pred             HHHHHHhccCcHHHHhC------CCCCcHHHHHHHHHHHhhhccCCCCCcCCccc--CCcccccCCcCHHHHHH-HHHHc
Confidence            44445577888887742      234667899999987543     3 2689997  4332223 455555555 88899


Q ss_pred             CCCCC
Q 047179          120 GKKLP  124 (130)
Q Consensus       120 gk~~P  124 (130)
                      |..+|
T Consensus        74 gv~~p   78 (91)
T 1siy_A           74 GVNIP   78 (91)
T ss_dssp             TCCCS
T ss_pred             CCCCC
Confidence            99875

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=93.39  E-value=0.003  Score=43.25  Aligned_cols=66  Identities=23%  Similarity=0.505  Sum_probs=45.1

Q ss_pred             cccccccccccccccccccCCCCCCCCcccccCCccc-----h-hhHHHHHHHhhhhccccccccchhhhhhhhcCCCCC
Q 047179           51 ALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDL-----E-AAVCLCTAIKANILGININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        51 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dl-----d-AA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P  124 (130)
                      ..+|..|.+.+.|      |.++..+||.-+++|...     | -+.|||...++.-++ .+|...+.. |...||-.+|
T Consensus         8 ~~~L~pCl~y~~~------~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~-~in~~~A~~-LP~~Cgv~~p   79 (92)
T 2alg_A            8 SSSLAPCIPYVRG------GGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GVNPNNAAA-LPGKCGVSIP   79 (92)
T ss_dssp             HHHHGGGHHHHHH------CSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST-TCCHHHHHH-HHHHTTCCCS
T ss_pred             HHhccCcHHHHcC------CCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC-ccChHHHHH-HHHHcCCCCC
Confidence            3467788887742      234556899999987631     2 158999977776664 455555555 8889999876

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=89.88  E-value=0.014  Score=39.73  Aligned_cols=66  Identities=26%  Similarity=0.476  Sum_probs=41.8

Q ss_pred             cccccccccccccccccccCCCCCCCCcccccCCccc---h---hhHHHHHHHhhhhccccccccchhhhhhhhcCCCCC
Q 047179           51 ALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDL---E---AAVCLCTAIKANILGININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        51 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dl---d---AA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P  124 (130)
                      ..+|..|.+.+.|      |.+|..+||.-+++|...   .   -+.|+|..-.+.-++ .+|...+.. |...||-.+|
T Consensus         7 ~~~L~pCl~y~~~------~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~-~in~~~A~~-LP~~C~v~~p   78 (90)
T 1bwo_A            7 DSLVRPCLSYVQG------GPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARS-IPPKCGVNLP   78 (90)
T ss_dssp             HHHHGGGHHHHTT------CSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCT-TCCHHHHHT-HHHHHTCCCS
T ss_pred             HHhhcccHHHHcC------CCCCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccC-CcCHHHHHH-HHHHcCCCCC
Confidence            3467788877742      233667899999987632   1   268999433333332 455555554 7789998765

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=89.41  E-value=0.025  Score=38.70  Aligned_cols=71  Identities=28%  Similarity=0.536  Sum_probs=44.9

Q ss_pred             CCcccccccccccccccccccccCCCCCCCCcccccCCcc---chh---hHHHHHHHhhhhccccccccchhhhhhhhcC
Q 047179           47 CPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLD---LEA---AVCLCTAIKANILGININIPISLSLLINTCG  120 (130)
Q Consensus        47 CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~d---ldA---A~CLCtaikanvlgi~~~ipv~l~~lln~Cg  120 (130)
                      |-....+|..|.+.+.|-     +.+|..+||.-+++|.+   -.+   +.|+|....+.-++ .+|...++. |-..||
T Consensus         4 C~~v~~~L~pCl~y~~~~-----~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~-~in~~~A~~-LP~~C~   76 (93)
T 1afh_A            4 CGQVASAIAPCISYARGQ-----GSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-GLNAGNAAS-IPSKCG   76 (93)
T ss_dssp             SHHHHHHHGGGHHHHTTS-----CCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTST-TCCHHHHHH-HHHHHH
T ss_pred             hHHHHHhccCcHHHHcCC-----CCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccccc-CcCHHHHHH-HHHHcC
Confidence            433345778888887421     23455689999998853   122   68999765555453 345445554 778899


Q ss_pred             CCCC
Q 047179          121 KKLP  124 (130)
Q Consensus       121 k~~P  124 (130)
                      -.+|
T Consensus        77 v~~p   80 (93)
T 1afh_A           77 VSIP   80 (93)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            8765

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=84.97  E-value=0.16  Score=34.84  Aligned_cols=70  Identities=26%  Similarity=0.534  Sum_probs=44.8

Q ss_pred             cccccccccccccccccCCCCCCCCcccccCCccc----hhhHHHHHHHhhhhcc-ccccccchhhhhhhhcCCCCC---
Q 047179           53 KLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDL----EAAVCLCTAIKANILG-ININIPISLSLLINTCGKKLP---  124 (130)
Q Consensus        53 kL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dl----dAA~CLCtaikanvlg-i~~~ipv~l~~lln~Cgk~~P---  124 (130)
                      .|.-|.+.+.|      |..+..+||.-+++|.+.    +--.|+|..+|...-+ ..+|..-+.. |-..||-.+|   
T Consensus        10 ~L~pCl~Yv~g------~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~-LP~~CgV~~p~~I   82 (93)
T 2ljo_A           10 DLSPCLTYLTG------GPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAA-LPGKCGVNIPYKI   82 (93)
T ss_dssp             HHHHHHHHHTT------SSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHH-HHHHHTCCCSSCC
T ss_pred             HHHhHHHHHcC------CCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHh-hhHhcCCCCCCCC
Confidence            45566666531      234567899988877543    2247899888875533 2455444444 7889999988   


Q ss_pred             -CCCcc
Q 047179          125 -SDFIC  129 (130)
Q Consensus       125 -~gf~C  129 (130)
                       ..+.|
T Consensus        83 s~~~dC   88 (93)
T 2ljo_A           83 STTTNC   88 (93)
T ss_dssp             STTCCG
T ss_pred             CCCCCC
Confidence             56666

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=84.10  E-value=0.083  Score=35.98  Aligned_cols=65  Identities=26%  Similarity=0.568  Sum_probs=41.4

Q ss_pred             cccccccccccccccccccCCCCCCCCcccccCCccch------hhHHHHHHHhhhhccccccccchhhhhhhhcCCCCC
Q 047179           51 ALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLE------AAVCLCTAIKANILGININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        51 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dld------AA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P  124 (130)
                      ..+|..|.+.+.|      |.+|. +||.-+++|...-      -+.|+|..--++-++ .+|...++. |-..||-.+|
T Consensus         8 ~~~L~pCl~y~~~------~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~-~in~~~A~~-LP~~C~v~~p   78 (91)
T 1t12_A            8 TSNLAPCLAYLRN------TGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS-GINLGKAAG-LPSTCGVNIP   78 (91)
T ss_dssp             HHHTHHHHHHHTT------SSCCT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCT-TCCHHHHHH-HHHHTTCCCS
T ss_pred             HHhccCcHHHHcC------CCChH-HHHHHHHHHHhhccCCCCCCccCCCccccccccC-CcChhHHHH-HHHHcCCCCC
Confidence            4467778877742      12255 8999999876431      278999633334453 455445554 7789998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	130
d1hypa_	75	a.52.1.1 (A:) Soybean hydrophobic protein {Soybean	3e-22

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]} Length = 75

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 81.3 bits (201), Expect = 3e-22
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)

Query: 53  KLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISL 112
            L +C  +L G++G V        CC+++ GL D+EA VCLC  ++A  +   +N+  +L
Sbjct: 5   DLSICLNILGGSLGTVD------DCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNL 55

Query: 113 SLLINTCGKKLPSDFIC 129
            L++N+CG+  PS+  C
Sbjct: 56  QLILNSCGRSYPSNATC 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	130
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	99.97
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	90.11
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	89.64
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	89.27
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	89.03

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.97  E-value=2.4e-32  Score=185.74  Aligned_cols=73  Identities=37%  Similarity=0.876  Sum_probs=66.5

Q ss_pred             CCCCcccccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCC
Q 047179           45 RRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLP  124 (130)
Q Consensus        45 ~~CP~d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P  124 (130)
                      ++||    |||+|+|||||++      ++.++||++|+||+|+|||+||||||||+++   +|+|+++++++|.|||++|
T Consensus         1 PtCP----Klg~C~nvLg~~~------~~~~~CC~Ll~GL~dleAAvCLCtaika~~l---lnvpv~l~llln~Cgk~~P   67 (75)
T d1hypa_           1 PSCP----DLSICLNILGGSL------GTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYP   67 (75)
T ss_dssp             CCSC----CCGGGGGGGGTCC------TTHHHHHHHHHTSCHHHHHHHHHHHHHHHTC---SCHHHHHHHHHHHTTCSSC
T ss_pred             CCCC----chhhHHHHhcCcc------CCCCCcchHHhhHHHHHHHHHHHHHHHHhhh---ccccchHHHHHHHcCCcCc
Confidence            3799    8999999998664      4568999999999999999999999999654   8899999999999999999


Q ss_pred             CCCccC
Q 047179          125 SDFICA  130 (130)
Q Consensus       125 ~gf~C~  130 (130)
                      +||+|+
T Consensus        68 ~gF~CP   73 (75)
T d1hypa_          68 SNATCP   73 (75)
T ss_dssp             CCCCCS
T ss_pred             CCCcCC
Confidence            999996

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=90.11  E-value=0.026  Score=35.96  Aligned_cols=64  Identities=30%  Similarity=0.591  Sum_probs=49.5

Q ss_pred             ccccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCCC
Q 047179           50 DALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPS  125 (130)
Q Consensus        50 d~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P~  125 (130)
                      |..+|..|+..+.      -|.+|+..||.-+.     |=--|||.=+|.-.+.--|+-|-+ +-+++.||..+|.
T Consensus         3 ~p~~L~~C~~Ai~------~g~~PS~~CC~kLk-----eQ~~ClC~Y~kdP~~~~yv~spna-rkv~~aCgvp~P~   66 (67)
T d1tuka1           3 QASQLAVCASAIL------SGAKPSGECCGNLR-----AQQGCFCQYAKDPTYGQYIRSPHA-RDTLTSCGLAVPH   66 (67)
T ss_dssp             CGGGGGGGHHHHH------HCCCCCHHHHHHHH-----HHGGGHHHHTTCTTTHHHHTSHHH-HHHHHHTTCCCCC
T ss_pred             ChhhccccHHHHh------cCCCCcHHHHHHHH-----hcCCccceecCCccHHHHcCCHHH-HHHHHhcCCCCCC
Confidence            3457899998763      46788999999887     456799999998887755554444 6688999998884

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.64  E-value=0.0089  Score=39.39  Aligned_cols=73  Identities=23%  Similarity=0.508  Sum_probs=49.1

Q ss_pred             cccccccccccccccccccCCCCCCCCcccccCCccc----hhhHHHHHHHhhhhccc-cccccchhhhhhhhcCCCCC-
Q 047179           51 ALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDL----EAAVCLCTAIKANILGI-NINIPISLSLLINTCGKKLP-  124 (130)
Q Consensus        51 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dl----dAA~CLCtaikanvlgi-~~~ipv~l~~lln~Cgk~~P-  124 (130)
                      ..+|.-|.+.+.|-     +..|.++||.-+++|.+.    +.-.|+|..||...-+. .+|..- ...|-..||-.+| 
T Consensus         8 ~~~l~pCl~Yltg~-----~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~~~in~~r-a~~LP~~C~v~l~~   81 (93)
T d1fk5a_           8 ASAIAPCISYARGQ-----GSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGN-AASIPSKCGVSIPY   81 (93)
T ss_dssp             HHHHGGGHHHHTTC-----SSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHH-HHHHHHHTTCCCSS
T ss_pred             HHHhhhhHHHHhCC-----CCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhcccccCCcCHHH-HHhhhHhcCCCCCC
Confidence            44677888877422     233567899999988763    34578998888765432 344433 4458889998877 


Q ss_pred             ---CCCcc
Q 047179          125 ---SDFIC  129 (130)
Q Consensus       125 ---~gf~C  129 (130)
                         ..+.|
T Consensus        82 pis~~~dC   89 (93)
T d1fk5a_          82 TISTSTDC   89 (93)
T ss_dssp             CCSTTCCG
T ss_pred             CCCCCCCC
Confidence               56666

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=89.27  E-value=0.0097  Score=39.11  Aligned_cols=71  Identities=25%  Similarity=0.563  Sum_probs=48.6

Q ss_pred             ccccccccccccccccccCCCCCCCCcccccCCccc----hhhHHHHHHHhhhhccc-cccccchhhhhhhhcCCCCC--
Q 047179           52 LKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDL----EAAVCLCTAIKANILGI-NINIPISLSLLINTCGKKLP--  124 (130)
Q Consensus        52 lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dl----dAA~CLCtaikanvlgi-~~~ipv~l~~lln~Cgk~~P--  124 (130)
                      .+|.-|.+.+.|      |..+.++||.-+++|.+.    +.-.|+|..+|...-++ .+|..-+ ..|-..||-++|  
T Consensus         8 ~~l~pCl~Yl~g------~~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~~~in~~ra-~~LP~~C~v~~p~p   80 (91)
T d1mida_           8 SKMKPCLTYVQG------GPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNA-ASIPSKCNVNVPYT   80 (91)
T ss_dssp             HHHGGGHHHHTT------CSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHH-HHHHHHTTCCCCSC
T ss_pred             HHHHhhHHHHcC------CCCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccCCCcCHHHH-HhchHhcCCCCCCC
Confidence            466778877742      234667999999988763    34579999998765332 3454443 458889999988  


Q ss_pred             --CCCcc
Q 047179          125 --SDFIC  129 (130)
Q Consensus       125 --~gf~C  129 (130)
                        ..+.|
T Consensus        81 is~~~dC   87 (91)
T d1mida_          81 ISPDIDC   87 (91)
T ss_dssp             CCTTCCG
T ss_pred             CCCCCCC
Confidence              66777

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=89.03  E-value=0.022  Score=36.52  Aligned_cols=63  Identities=32%  Similarity=0.618  Sum_probs=48.4

Q ss_pred             cccccccccccccccccccCCCCCCCCcccccCCccchhhHHHHHHHhhhhccccccccchhhhhhhhcCCCCCC
Q 047179           51 ALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLSLLINTCGKKLPS  125 (130)
Q Consensus        51 ~lkL~vCa~vL~gl~~~~lg~p~~~~CC~li~gL~dldAA~CLCtaikanvlgi~~~ipv~l~~lln~Cgk~~P~  125 (130)
                      ..+|..|+..+.      -|.+|+..||.-+.     |=.-|||.=+|.-.++--|+-|- -+-+++.||..+|.
T Consensus         5 p~~L~~C~~ai~------~g~~PS~~CC~kLk-----eQ~~ClC~Y~k~P~~~~yv~spn-arkv~~aCgvp~P~   67 (69)
T d1l6ha_           5 AGQLTVCTGAIA------GGARPTAACCSSLR-----AQQGCFCQFAKDPRYGRYVNSPN-ARKAVSSCGIALPT   67 (69)
T ss_dssp             TTTHHHHHHHHT------TCCSTTHHHHHHHH-----HHHHHHHHHTTCSSHHHHTTTTT-GGGCCCCCSSCSCC
T ss_pred             hhhccccHHHHh------CCCCCcHHHHHHHH-----hcCCccceeccCccHHHHcCCHH-HHHHHHhcCCCCCC
Confidence            457888988763      46788889999887     44679999999887775556544 36688999998885