Citrus Sinensis ID: 047308

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------88
MATLAPSLAFRPCCFNCGAVESSPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLSAQVCQNAVTTRPDFRACASSSRVSVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVSVGEKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPLRDGSGDFEIRNHLSAKFCVPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFEASNGND
ccccccccccccEEccccccccccccccccccccccccEEccccccccHHHHHHHHHHHHHHcccccccccHHHHccccccEEccccccccccccHHHHccccEEEEEEcccccEEEEEEEEccEEEEEEEEccccccccccEEEEEEEEEEccccccccccccccccccccccccccccccccccEEEEEccccccccEEEEcccccccccccccccccccccccccccEEcccccccccccEEEccccEEEEEEccccccEEEEEEccccccccEEEEEccccccccccEEEEEEcccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccHHcHHHHHHHHHHccccHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHccccccccEEEEcccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEccccccccccccccccEEEEEEccccccccccccccccccEEEEEEccccccEEEEccccccccccEEEEEccccccccccccccccHHHcccccEEEEcccEEEEEEEccccc
ccccccEEEEcccEEcccccccccccHEEEcccccccEEEccEEccccccccHccccccccccccccccccHHHHHHHccccccccHccccccccHHHHccccHHHEEHccccEEEEEEEcccccEEEEEEEEccEccccccEEEEEEEEEEcccccEEEccccccccccccccEEEEEEEccccEEEEEEEEcccccccEEEEEcccccccccccccccccccccccccEEEcccccccccccEcccccEEEEEEEccccEEEEEEEcccccccEEEEEEEcccccccccEEEEEccccccccEEEEEEcccccccccccccHcHEcccHHHHHHccccccccccccccccccEEEEccccccccccccccccccEEEEEEEEccccccccccccHHHcccHHHcHcHHHHHHHccccEEEEccHHHHcccccccccEcEEccccHHcccccccHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHccccHHEEEEEEccccccccccEccccccccccHHHccccHHHHHHHHcccccHHHHHHHHcccHHHHccccccEEEEEEEEccccccHHHHEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEcccccccccccccccEEEEEEEccccccccccccccccccEEEEEEEcccccEEEEccccccccEEEEEEEccccccccccccccccccccccccEEEEcccEEEEEEEccccc
matlapslafrpccfncgavessppsklcaasasashyvfkskctrrparlEVEKTLSAQVCQNavttrpdfracasssrvsvdetqpvftpttevdelQKVSTYLFRTDLGGLVSVSVGEKNVNYAVTIDVsslqttrggHKLVLIWGVytsdsssymhlgsqcftpdaktgsietpftptsfDTFALELGFEAKQTPFYLSFLLksplrdgsgdfeirnhlsakfcvpvglnagvpspmglsfstdgslnfAIFSRHAQGVVLCLyddttadrpaleldldpyinrsgdiWHASMESTWNFVSYGyrfkgsfsqgdgykshlesvlldPYAKIIvnsipnhhdlglppkylgrlckepdfdwggdvhlnlpMEKLVVYRLNVMrfsehkssklppdiagtfsgvTEKVHHLKDLGvnaillepilsfdeqkgpyfprhffsptklhgpsrgsiSAINSMKEMVKKLHANGIEVLLEVVFTRtadgalqgiddssyyyahrgegiettnvlncnyPTVQQMILNSLRHWVTEFHIDGfcfinassllrgfhgeylsrpplieaiafdpllsKAKLIAdywdphgvapkdtrfphwKRWAELNTNFCNDVRNFFRGEGLLSDLAtrlcgsgdifsdgrgpafsfnyiarntglplvdlvsfsggglaselswncgeegpttkTAVLERRLKQIRNFLFVLYVSLGvpilnmgdecgqsswgspsyadrkpfdwnalatgfGIQITEFISFLSSFRLKrkenidwhgsdhspprwedpdcKFLAMRLKVdkaesqlssessqtkgdlyiacnaadhsesvvlppppegmtwhhlvdtalpfpgffstegkpVLEQMAGLytyemkpysctlfeasngnd
matlapslafRPCCFNCGAVESSPPSKLCAASASASHYVFKSKCTRRPARLEvektlsaqvcqnavttrpdfracasssrvsvdetqpvftpttevdelqkVSTYLFRTDLGGLVSVSVGEKNVNYAVTIdvsslqttrggHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPLRDGSGDFEIRNHLSAKFCVPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFsehkssklppdiAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQKGPYFPRHFfsptklhgpsrGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSGGGLASelswncgeegpTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIdwhgsdhspprwedPDCKFLAMRLKVDKAesqlssessqtkGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFEASNGND
MATLAPSLAFRPCCFNCGAVESSPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLSAQVCQNAVTTRPDFRACASSSRVSVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVSVGEKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPLRDGSGDFEIRNHLSAKFCVPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFEASNGND
*******LAFRPCCFNCGAVE*******CAA*ASASHYVFKSKCTRRPARLEVEKTLSAQVCQNAVTTRPDFRAC*************VFTPTTEVDELQKVSTYLFRTDLGGLVSVSVGEKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPLRDGSGDFEIRNHLSAKFCVPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSE********DIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPT***************MKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWH************DCKFLAMR********************LYIACNAADH***VVL****EGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLF*******
*****PSLAFRPCCFNCGAVESSPPSKL*********YVFKSKCTRRPARLEVEKTLSAQVCQNAVTTRPDFRACA****************************YLFRTDLGGLVSVSVGEKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMH**********************SFDTFALELGFEAKQTPFYLSFL***************************LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRG*ISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTL*EASN***
MATLAPSLAFRPCCFNCGAV******************VFKSKCTRRPARLEVEKTLSAQVCQNAVTTRPDFRA***********TQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVSVGEKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPLRDGSGDFEIRNHLSAKFCVPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWEDPDCKFLAMRLKVD*************KGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFEASNGND
**TLAPSLAFRPCCFNCGAVESSPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLSAQVCQNAVTTRPD***CASSSRVSV*ETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVSVGEKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPL***************KFCVPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFEAS****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATLAPSLAFRPCCFNCGAVESSPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLSAQVCQNAVTTRPDFRACASSSRVSVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVSVGEKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPLRDGSGDFEIRNHLSAKFCVPVGLNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRKENIDWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFEASNGND
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query878 2.2.26 [Sep-21-2011]
Q8L735882 Isoamylase 2, chloroplast yes no 0.976 0.971 0.551 0.0
Q9M0S5764 Isoamylase 3, chloroplast no no 0.698 0.802 0.357 1e-103
O04196783 Isoamylase 1, chloroplast no no 0.669 0.750 0.335 5e-91
P0A4Y4721 Glycogen operon protein G yes no 0.667 0.812 0.297 1e-64
P0A4Y5721 Glycogen operon protein G yes no 0.667 0.812 0.297 1e-64
A8GKU9661 Glycogen debranching enzy yes no 0.652 0.866 0.294 8e-55
A1JSI8662 Glycogen debranching enzy yes no 0.654 0.868 0.294 4e-54
B5XTQ8658 Glycogen debranching enzy yes no 0.538 0.718 0.319 9e-52
C6DH78658 Glycogen debranching enzy yes no 0.662 0.884 0.288 2e-51
A6TF50658 Glycogen debranching enzy yes no 0.539 0.720 0.314 7e-51
>sp|Q8L735|ISOA2_ARATH Isoamylase 2, chloroplastic OS=Arabidopsis thaliana GN=ISA2 PE=1 SV=2 Back     alignment and function desciption
 Score =  965 bits (2495), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/897 (55%), Positives = 622/897 (69%), Gaps = 40/897 (4%)

Query: 1   MATLAPSLAFRPCCFNCGAVES--SPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLS 58
           MA  +PS+    CC N G   +   P ++L     +      ++    R       K   
Sbjct: 1   MAAWSPSVGIGSCCLNNGITRTWKFPSARLFTGRKNKIKLGSETLMFTR-------KRFM 53

Query: 59  AQVCQNAVTTRPDFRACASSSRVSVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVS 118
             +  +A+ +    + CAS  + S++  + + +   E D+L+KV++Y FRT  G LV V 
Sbjct: 54  GDLVTSALQSYQFSKICAS--KTSIELREALSSRRAEADDLKKVTSYSFRTKAGALVKVK 111

Query: 119 VGEKNVNYAVTIDVSSLQTT-RGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIET 177
           V +K   Y++ + VSSL+ +     +LV++WGVY SDSS ++ L  +  + D++T + ET
Sbjct: 112 VEKKREKYSILVYVSSLELSGDDKSRLVMVWGVYRSDSSCFLPLDFENSSQDSQTHTTET 171

Query: 178 PFTPTSFDTFALELGFEAKQTPFYLSFLLK-SPLRDGSGDFEIRNHLSAKFCVPVGLNAG 236
            F  +S     L L F+ K++PFYLSF LK    RD  G  E+  H    FC+PVG  AG
Sbjct: 172 TFVKSSLSELMLGLEFDGKESPFYLSFHLKLVSGRDPDGQ-EMLTHRDTDFCIPVGFTAG 230

Query: 237 VPSPMGLSFS-TDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHA 295
            P P+GLS    D S NF+ FSR +  VVLCLYDD+T D+PALELDLDPY+NR+GD+WHA
Sbjct: 231 HPLPLGLSSGPDDDSWNFSFFSRSSTNVVLCLYDDSTTDKPALELDLDPYVNRTGDVWHA 290

Query: 296 SMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGR 355
           S+++TW+FV YGYR K +    +      E ++LDPYA ++  S+          KYLG 
Sbjct: 291 SVDNTWDFVRYGYRCKETAHSKEDVDVEGEPIVLDPYATVVGKSVSQ--------KYLGS 342

Query: 356 LCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKD 415
           L K P FDWG DV  N+P+EKL+VYRLNV  F++H+SSKLP ++AGTFSGV EKV HLK 
Sbjct: 343 LSKSPSFDWGEDVSPNIPLEKLLVYRLNVKGFTQHRSSKLPSNVAGTFSGVAEKVSHLKT 402

Query: 416 LGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEV 475
           LG NA+LLEPI SF EQKGPYFP HFFSP  ++GPS    SA+NSMK MVKKLH+ GIEV
Sbjct: 403 LGTNAVLLEPIFSFSEQKGPYFPFHFFSPMDIYGPSNSLESAVNSMKVMVKKLHSEGIEV 462

Query: 476 LLEVVFTRTAD-GALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEF 534
           LLEVVFT TAD GAL+GIDDSSYYY  R   +++ + LNCNYP VQQ++L SLR+WVTEF
Sbjct: 463 LLEVVFTHTADSGALRGIDDSSYYYKGRANDLDSKSYLNCNYPVVQQLVLESLRYWVTEF 522

Query: 535 HIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFP 594
           H+DGFCFINASSLLRG HGE LSRPPL+EAIAFDPLL++ KLIAD WDP  + PK+ RFP
Sbjct: 523 HVDGFCFINASSLLRGVHGEQLSRPPLVEAIAFDPLLAETKLIADCWDPLEMMPKEVRFP 582

Query: 595 HWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLP 654
           HWKRWAELNT +C +VRNF RG G+LSDLATR+CGSGD+F+DGRGPAFSFNYI+RN+GL 
Sbjct: 583 HWKRWAELNTRYCRNVRNFLRGRGVLSDLATRICGSGDVFTDGRGPAFSFNYISRNSGLS 642

Query: 655 LVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDE 714
           LVD+VSFSG  LASELSWNCGEEG T K+AVL+RRLKQIRNFLF+ Y+SLGVP+LNMGDE
Sbjct: 643 LVDIVSFSGPELASELSWNCGEEGATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGDE 702

Query: 715 CGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRK-----------ENID 763
           CG S+ GSP    RKPFDWN LA+ FG QIT+FISF++S R +R            ENI 
Sbjct: 703 CGISTRGSPLLESRKPFDWNLLASAFGTQITQFISFMTSVRARRSDVFQRRDFLKPENIV 762

Query: 764 WHGSDHSPPRWEDPDCKFLAMRLKVDKAE---SQLSSESSQTKGDLYIACNAADHSESVV 820
           W+ +D + P+WEDP  KFLA+ +K +  E   + L+  +     DL+I  NA+DH ESVV
Sbjct: 763 WYANDQTTPKWEDPASKFLALEIKSESEEEETASLAEPNEPKSNDLFIGFNASDHPESVV 822

Query: 821 LPPPPEGMTWHHLVDTALPFPGFFSTEGKPVL--EQMAGLYTYEMKPYSCTLFEASN 875
           LP  P+G  W  LVDTALPFPGFFS EG+ V+  E +  L  YEMKPYSCTLFE  N
Sbjct: 823 LPSLPDGSKWRRLVDTALPFPGFFSVEGETVVAEEPLQQLVVYEMKPYSCTLFETIN 879
Involved in the trimming of pre-amylopectin chains. Accelerates the crystallization of nascent amylopectin molecules during starch synthesis. ISA1 and ISA2 work exclusively together as a multimeric holoenzyme. ISA1-ISA2 removes preferentially branches that are very close to other branches.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2 Back     alignment and function description
>sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1 Back     alignment and function description
>sp|P0A4Y4|GLGX_MYCTU Glycogen operon protein GlgX homolog OS=Mycobacterium tuberculosis GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|P0A4Y5|GLGX_MYCBO Glycogen operon protein GlgX homolog OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A8GKU9|GLGX_SERP5 Glycogen debranching enzyme OS=Serratia proteamaculans (strain 568) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A1JSI8|GLGX_YERE8 Glycogen debranching enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|B5XTQ8|GLGX_KLEP3 Glycogen debranching enzyme OS=Klebsiella pneumoniae (strain 342) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|C6DH78|GLGX_PECCP Glycogen debranching enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A6TF50|GLGX_KLEP7 Glycogen debranching enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glgX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query878
255584716872 isoamylase, putative [Ricinus communis] 0.970 0.977 0.655 0.0
225436952882 PREDICTED: isoamylase 2, chloroplastic [ 0.980 0.976 0.627 0.0
449515055885 PREDICTED: LOW QUALITY PROTEIN: isoamyla 0.986 0.978 0.571 0.0
449436816885 PREDICTED: isoamylase 2, chloroplastic-l 0.986 0.978 0.571 0.0
356572164865 PREDICTED: isoamylase 2, chloroplastic-l 0.946 0.960 0.600 0.0
356503523866 PREDICTED: isoamylase 2, chloroplastic-l 0.937 0.950 0.604 0.0
139867055865 isoamylase-type starch-debranching enzym 0.945 0.959 0.588 0.0
297843142872 ATISA2/BE2/DBE1/ISA2 [Arabidopsis lyrata 0.903 0.909 0.586 0.0
27728147878 isoamylase isoform 2 [Solanum tuberosum] 0.957 0.957 0.559 0.0
15218771882 Isoamylase 2 [Arabidopsis thaliana] gi|4 0.976 0.971 0.551 0.0
>gi|255584716|ref|XP_002533079.1| isoamylase, putative [Ricinus communis] gi|223527143|gb|EEF29318.1| isoamylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1171 bits (3029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/888 (65%), Positives = 684/888 (77%), Gaps = 36/888 (4%)

Query: 1   MATLAPSLAFRPCCFNCGAVESSPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLSAQ 60
           MAT+ PS A RPC   CGA ESS   KL                 +   RL +++ L  Q
Sbjct: 1   MATIIPSFAIRPCYCVCGATESS---KLAVTG------------NKDFGRLVLDQRLFNQ 45

Query: 61  ---VCQNAVTTRPDFRACASSSRVSVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSV 117
                + +     D R C S++RV V +T+  F+ +  +DEL KVSTYLFRT  GG V V
Sbjct: 46  RLHFWKQSPHWSLDSRVC-SAARVPVQQTELRFSTSAPLDELNKVSTYLFRTQFGGHVKV 104

Query: 118 SVGEKNVNYAVTIDVSSLQTTRGGHKLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIET 177
            V +KN  YAV I+VSSL+     ++L+LIWG+Y SDSS +M L SQ F P+A+   ++T
Sbjct: 105 LVRKKNAKYAVYIEVSSLELGTTDYRLMLIWGIYRSDSSCFMPLDSQNFAPNAR--KMDT 162

Query: 178 PFTPTSFDTFALELGFEAKQTPFYLSFLLKSPLRDGSGDFEIRNHLSAKFCVPVGLNAGV 237
                SF TFALEL FE KQTPFYLSFLLKS L   +   EI+NH +A FCVP+G N+G 
Sbjct: 163 ALVQNSFGTFALELEFEPKQTPFYLSFLLKSKLNTDASGLEIKNHKNANFCVPIGFNSGD 222

Query: 238 PSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASM 297
           PSP+GLSFSTDGS+NFA FSR+ +G+VLCLYDD+T D+PALELDLDPY+NR+GD+WHAS+
Sbjct: 223 PSPLGLSFSTDGSMNFAFFSRNVEGLVLCLYDDSTTDKPALELDLDPYVNRTGDVWHASL 282

Query: 298 ESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLC 357
           E  W F SYGYR KG+  QG+  K  +E VLLDPYA++I +S+ +H    L  KYLGRLC
Sbjct: 283 EGAWTFTSYGYRCKGAILQGNTSKVDMECVLLDPYARVIASSMTDHGSR-LSAKYLGRLC 341

Query: 358 KEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLG 417
           +EP F+WG D+  NL MEKL+VYRLNV RF+EHKS KL  DIAGTF+G+ EK+ H ++LG
Sbjct: 342 EEPAFEWGSDIRPNLAMEKLIVYRLNVKRFTEHKSGKLYSDIAGTFAGLIEKMDHFRNLG 401

Query: 418 VNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLL 477
           VNA+LLEPI  FDEQKGPYFP HFFSP+ ++GPS GSISAI SMKEMVK+LHAN IEVLL
Sbjct: 402 VNAVLLEPIFPFDEQKGPYFPYHFFSPSNIYGPSGGSISAITSMKEMVKELHANRIEVLL 461

Query: 478 EVVFTRTADG-ALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHI 536
           EVVFT TA+G ALQGIDD SYYY      +++ N LNCNYP VQ+MIL+SL+HWVTEFHI
Sbjct: 462 EVVFTHTAEGGALQGIDDFSYYYTK--SSMDSRNALNCNYPIVQRMILDSLQHWVTEFHI 519

Query: 537 DGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHW 596
           DGFCFINAS+LL GFHGE+LSRPPL+EAIAFDP+LSK K+IAD W P    PK+T FPHW
Sbjct: 520 DGFCFINASALLTGFHGEHLSRPPLVEAIAFDPILSKTKIIADPWHPEHRIPKETCFPHW 579

Query: 597 KRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLV 656
           KRWAE+N  FC DVRNF RGE LL DLATRLCGSGDIFS+GRGPAFSFNYIARN+GLPLV
Sbjct: 580 KRWAEINPKFCIDVRNFLRGESLLGDLATRLCGSGDIFSNGRGPAFSFNYIARNSGLPLV 639

Query: 657 DLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECG 716
           DLVSFSGG L SELSWNCGEEGPT KTAVLERRLKQIRN+LF+LYVSLGVP+LNMGDECG
Sbjct: 640 DLVSFSGGELGSELSWNCGEEGPTNKTAVLERRLKQIRNYLFILYVSLGVPVLNMGDECG 699

Query: 717 QSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKR-----------KENIDWH 765
           QSS GS SY DRKPFDWNAL+T FG Q+T+FISFLSS R++R           +ENIDWH
Sbjct: 700 QSSRGSISYGDRKPFDWNALSTSFGNQMTQFISFLSSLRMRRSDLLQKRNFLKEENIDWH 759

Query: 766 GSDHSPPRWEDPDCKFLAMRLKVDKAESQLSSESSQTKGDLYIACNAADHSESVVLPPPP 825
           G+D SPPRWEDP CKFLAM LK+DKAESQLSSE S  KGDL++A NAA H+ESV+LPP P
Sbjct: 760 GNDQSPPRWEDPTCKFLAMTLKIDKAESQLSSEPSNIKGDLFMAFNAAGHAESVILPPVP 819

Query: 826 EGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFEA 873
           EGM W  LVDTALPFPGFFS +G+PV+EQ+AGL  Y+M  +SCTLFEA
Sbjct: 820 EGMIWRRLVDTALPFPGFFSEDGEPVVEQIAGLIAYKMNSHSCTLFEA 867

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225436952|ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|449515055|ref|XP_004164565.1| PREDICTED: LOW QUALITY PROTEIN: isoamylase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449436816|ref|XP_004136188.1| PREDICTED: isoamylase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356572164|ref|XP_003554240.1| PREDICTED: isoamylase 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356503523|ref|XP_003520557.1| PREDICTED: isoamylase 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|139867055|dbj|BAF52942.1| isoamylase-type starch-debranching enzyme 2 [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|297843142|ref|XP_002889452.1| ATISA2/BE2/DBE1/ISA2 [Arabidopsis lyrata subsp. lyrata] gi|297335294|gb|EFH65711.1| ATISA2/BE2/DBE1/ISA2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|27728147|gb|AAN15318.1| isoamylase isoform 2 [Solanum tuberosum] Back     alignment and taxonomy information
>gi|15218771|ref|NP_171830.1| Isoamylase 2 [Arabidopsis thaliana] gi|42571321|ref|NP_973751.1| Isoamylase 2 [Arabidopsis thaliana] gi|251764780|sp|Q8L735.2|ISOA2_ARATH RecName: Full=Isoamylase 2, chloroplastic; Short=AtISA2; AltName: Full=Protein DEBRANCHING ENZYME 1; Flags: Precursor gi|3850573|gb|AAC72113.1| Similar to gi|1652733 glycogen operon protein GlgX from Synechocystis sp. genome gb|D90908. ESTs gb|H36690, gb|AA712462, gb|AA651230 and gb|N95932 come from this gene [Arabidopsis thaliana] gi|332189436|gb|AEE27557.1| Isoamylase 2 [Arabidopsis thaliana] gi|332189437|gb|AEE27558.1| Isoamylase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query878
TAIR|locus:2014500882 DBE1 "debranching enzyme 1" [A 0.974 0.970 0.556 2.3e-261
TAIR|locus:2061216783 ISA1 "isoamylase 1" [Arabidops 0.223 0.250 0.375 5.2e-82
TAIR|locus:2122343764 ISA3 "isoamylase 3" [Arabidops 0.477 0.548 0.352 3.8e-60
UNIPROTKB|Q8EGU6750 glgX "Glycogen isoamylase GlgX 0.334 0.392 0.345 1.6e-46
TIGR_CMR|SO_1495750 SO_1495 "glycogen operon prote 0.334 0.392 0.345 1.6e-46
UNIPROTKB|P15067657 glgX [Escherichia coli K-12 (t 0.474 0.634 0.282 4.8e-31
UNIPROTKB|Q9KKS1656 VC_A1029 "Glycogen operon prot 0.449 0.602 0.280 6.2e-30
TIGR_CMR|VC_A1029656 VC_A1029 "glycogen operon prot 0.449 0.602 0.280 6.2e-30
ZFIN|ZDB-GENE-110914-16630 si:ch211-247m23.1 "si:ch211-24 0.240 0.334 0.268 4.1e-08
TIGR_CMR|GSU_2358630 GSU_2358 "isoamylase family pr 0.184 0.257 0.252 3.8e-07
TAIR|locus:2014500 DBE1 "debranching enzyme 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2515 (890.4 bits), Expect = 2.3e-261, P = 2.3e-261
 Identities = 500/898 (55%), Positives = 625/898 (69%)

Query:     1 MATLAPSLAFRPCCFNCGAVES--SPPSKLCAASASASHYVFKSKCTRRPARLEVEKTLS 58
             MA  +PS+    CC N G   +   P ++L     +      K K           K   
Sbjct:     1 MAAWSPSVGIGSCCLNNGITRTWKFPSARLFTGRKN------KIKLGSETLMF-TRKRFM 53

Query:    59 AQVCQNAVTTRPDFRACASSSRVSVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVS 118
               +  +A+ +    + CAS  + S++  + + +   E D+L+KV++Y FRT  G LV V 
Sbjct:    54 GDLVTSALQSYQFSKICAS--KTSIELREALSSRRAEADDLKKVTSYSFRTKAGALVKVK 111

Query:   119 VGEKNVNYAVTIDVSSLQTTRGGHK--LVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIE 176
             V +K   Y++ + VSSL+ + G  K  LV++WGVY SDSS ++ L  +  + D++T + E
Sbjct:   112 VEKKREKYSILVYVSSLELS-GDDKSRLVMVWGVYRSDSSCFLPLDFENSSQDSQTHTTE 170

Query:   177 TPFTPTSFDTFALELGFEAKQTPFYLSFLLKSPL-RDGSGDFEIRNHLSAKFCVPVGLNA 235
             T F  +S     L L F+ K++PFYLSF LK    RD  G  E+  H    FC+PVG  A
Sbjct:   171 TTFVKSSLSELMLGLEFDGKESPFYLSFHLKLVSGRDPDGQ-EMLTHRDTDFCIPVGFTA 229

Query:   236 GVPSPMGLSFSTDG-SLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWH 294
             G P P+GLS   D  S NF+ FSR +  VVLCLYDD+T D+PALELDLDPY+NR+GD+WH
Sbjct:   230 GHPLPLGLSSGPDDDSWNFSFFSRSSTNVVLCLYDDSTTDKPALELDLDPYVNRTGDVWH 289

Query:   295 ASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLG 354
             AS+++TW+FV YGYR K +    +      E ++LDPYA ++  S+          KYLG
Sbjct:   290 ASVDNTWDFVRYGYRCKETAHSKEDVDVEGEPIVLDPYATVVGKSVSQ--------KYLG 341

Query:   355 RLCKEPDFDWGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLK 414
              L K P FDWG DV  N+P+EKL+VYRLNV  F++H+SSKLP ++AGTFSGV EKV HLK
Sbjct:   342 SLSKSPSFDWGEDVSPNIPLEKLLVYRLNVKGFTQHRSSKLPSNVAGTFSGVAEKVSHLK 401

Query:   415 DLGVNAILLEPILSFDEQKGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIE 474
              LG NA+LLEPI SF EQKGPYFP HFFSP  ++GPS    SA+NSMK MVKKLH+ GIE
Sbjct:   402 TLGTNAVLLEPIFSFSEQKGPYFPFHFFSPMDIYGPSNSLESAVNSMKVMVKKLHSEGIE 461

Query:   475 VLLEVVFTRTAD-GALQGIDDSSYYYAHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTE 533
             VLLEVVFT TAD GAL+GIDDSSYYY  R   +++ + LNCNYP VQQ++L SLR+WVTE
Sbjct:   462 VLLEVVFTHTADSGALRGIDDSSYYYKGRANDLDSKSYLNCNYPVVQQLVLESLRYWVTE 521

Query:   534 FHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRF 593
             FH+DGFCFINASSLLRG HGE LSRPPL+EAIAFDPLL++ KLIAD WDP  + PK+ RF
Sbjct:   522 FHVDGFCFINASSLLRGVHGEQLSRPPLVEAIAFDPLLAETKLIADCWDPLEMMPKEVRF 581

Query:   594 PHWKRWAELNTNFCNDVRNFFRGEGLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGL 653
             PHWKRWAELNT +C +VRNF RG G+LSDLATR+CGSGD+F+DGRGPAFSFNYI+RN+GL
Sbjct:   582 PHWKRWAELNTRYCRNVRNFLRGRGVLSDLATRICGSGDVFTDGRGPAFSFNYISRNSGL 641

Query:   654 PLVDLVSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGD 713
              LVD+VSFSG  LASELSWNCGEEG T K+AVL+RRLKQIRNFLF+ Y+SLGVP+LNMGD
Sbjct:   642 SLVDIVSFSGPELASELSWNCGEEGATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGD 701

Query:   714 ECGQSSWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKRK-----------ENI 762
             ECG S+ GSP    RKPFDWN LA+ FG QIT+FISF++S R +R            ENI
Sbjct:   702 ECGISTRGSPLLESRKPFDWNLLASAFGTQITQFISFMTSVRARRSDVFQRRDFLKPENI 761

Query:   763 DWHGSDHSPPRWEDPDCKFLAMRLKVDKAESQLSS--ESSQTKG-DLYIACNAADHSESV 819
              W+ +D + P+WEDP  KFLA+ +K +  E + +S  E ++ K  DL+I  NA+DH ESV
Sbjct:   762 VWYANDQTTPKWEDPASKFLALEIKSESEEEETASLAEPNEPKSNDLFIGFNASDHPESV 821

Query:   820 VLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVL--EQMAGLYTYEMKPYSCTLFEASN 875
             VLP  P+G  W  LVDTALPFPGFFS EG+ V+  E +  L  YEMKPYSCTLFE  N
Sbjct:   822 VLPSLPDGSKWRRLVDTALPFPGFFSVEGETVVAEEPLQQLVVYEMKPYSCTLFETIN 879
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004556 "alpha-amylase activity" evidence=ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043169 "cation binding" evidence=IEA
GO:0019156 "isoamylase activity" evidence=IDA;IMP
GO:0010021 "amylopectin biosynthetic process" evidence=IMP
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2061216 ISA1 "isoamylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122343 ISA3 "isoamylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EGU6 glgX "Glycogen isoamylase GlgX" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1495 SO_1495 "glycogen operon protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P15067 glgX [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KKS1 VC_A1029 "Glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A1029 VC_A1029 "glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-110914-16 si:ch211-247m23.1 "si:ch211-247m23.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2358 GSU_2358 "isoamylase family protein" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8L735ISOA2_ARATHNo assigned EC number0.55180.97600.9716yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query878
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 1e-125
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 1e-114
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 1e-110
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 1e-109
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 4e-73
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 2e-61
cd02856130 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early 5e-30
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 5e-25
cd00551260 cd00551, AmyAc_family, Alpha amylase catalytic dom 1e-22
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 2e-21
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 5e-19
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 6e-19
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 2e-18
cd11313336 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly 3e-18
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 4e-14
cd11321406 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic 5e-11
cd11338389 cd11338, AmyAc_CMD, Alpha amylase catalytic domain 3e-10
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 6e-10
COG0366505 COG0366, AmyA, Glycosidases [Carbohydrate transpor 7e-10
cd11322402 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom 2e-08
pfam0292283 pfam02922, CBM_48, Carbohydrate-binding module 48 2e-08
smart00642166 smart00642, Aamy, Alpha-amylase domain 3e-08
cd11337328 cd11337, AmyAc_CMD_like, Alpha amylase catalytic d 3e-08
pfam00128314 pfam00128, Alpha-amylase, Alpha amylase, catalytic 4e-07
PLN02877970 PLN02877, PLN02877, alpha-amylase/limit dextrinase 4e-07
TIGR02103898 TIGR02103, pullul_strch, alpha-1,6-glucosidases, p 1e-06
cd11320389 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase 1e-06
cd11339344 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal 3e-06
cd11353366 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat 4e-06
TIGR02403543 TIGR02403, trehalose_treC, alpha,alpha-phosphotreh 1e-05
cd11334447 cd11334, AmyAc_TreS, Alpha amylase catalytic domai 2e-05
cd11328470 cd11328, AmyAc_maltase, Alpha amylase catalytic do 3e-05
PLN02447758 PLN02447, PLN02447, 1,4-alpha-glucan-branching enz 5e-05
PRK12568730 PRK12568, PRK12568, glycogen branching enzyme; Pro 8e-05
cd11234101 cd11234, E_set_GDE_N, N-terminal Early set domain 9e-05
cd11340407 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catal 1e-04
cd11335538 cd11335, AmyAc_MTase_N, Alpha amylase catalytic do 2e-04
cd11319375 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic d 3e-04
PLN03244872 PLN03244, PLN03244, alpha-amylase; Provisional 3e-04
cd11324536 cd11324, AmyAc_Amylosucrase, Alpha amylase catalyt 3e-04
PRK10785598 PRK10785, PRK10785, maltodextrin glucosidase; Prov 4e-04
PLN02960897 PLN02960, PLN02960, alpha-amylase 4e-04
cd11316403 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic 7e-04
PRK09505683 PRK09505, malS, alpha-amylase; Reviewed 7e-04
cd11333428 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase ca 0.002
TIGR02456539 TIGR02456, treS_nterm, trehalose synthase 0.003
PRK12313633 PRK12313, PRK12313, glycogen branching enzyme; Pro 0.003
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information 
 Score =  379 bits (976), Expect = e-125
 Identities = 179/400 (44%), Positives = 222/400 (55%), Gaps = 72/400 (18%)

Query: 373 PMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQ 432
           P+E+LVVY L+V  F+ H+S++LPP  AGTF GV EKV HLK LGVN +LL+PI +F   
Sbjct: 1   PLEQLVVYELDVATFTSHRSAQLPPQHAGTFLGVLEKVDHLKSLGVNTVLLQPIFAFARV 60

Query: 433 KGPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADG----- 487
           KGPY+P  FFS    +G    S+SA   ++ MVK LH+NGIEVLLEVV T TA+G     
Sbjct: 61  KGPYYPPSFFSAPDPYGAGDSSLSASAELRAMVKGLHSNGIEVLLEVVLTHTAEGTDESP 120

Query: 488 ---ALQGIDDSSYYYAHRGEGIE-----TTNVLNCNYPTVQQMILNSLRHWVTEFHIDGF 539
              +L+GID +SYY   +   +E        VLNCN+P  Q +IL+SLRHW TEF +DGF
Sbjct: 121 ESESLRGIDAASYYILGKSGVLENSGVPGAAVLNCNHPVTQSLILDSLRHWATEFGVDGF 180

Query: 540 CFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRW 599
           CFINA  L+RG HGE LSRPPL+EAIAFDP+L+  KLIAD  DP  +  K  +FPHW RW
Sbjct: 181 CFINAEGLVRGPHGEVLSRPPLLEAIAFDPVLANTKLIADPSDPLLLPRKAGKFPHWGRW 240

Query: 600 AELNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFSDGRGPAFSFNYIARNTGLPLVDL 658
            E NT +  DVR FFRGE G+LSD ATRLCGS D+F              R+    LV L
Sbjct: 241 GERNTRYGRDVRQFFRGEPGVLSDFATRLCGSADLF-------------LRSL---LVTL 284

Query: 659 VSFSGGGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQS 718
               G  +      N G+E   +    +                                
Sbjct: 285 FLSLGIPVI-----NMGDEYGHSSFGSV-------------------------------- 307

Query: 719 SWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFRLKR 758
                S     P  W  L + FG   T FIS LS+ R +R
Sbjct: 308 -----SSLSSSPRWWALLKSAFGKATTSFISALSALRRRR 342

Two types of debranching enzymes exist in plants: isoamylase-type (EC 3.2.1.68) and a pullulanase-type (EC 3.2.1.41, also known as limit-dextrinase). These efficiently hydrolyze alpha-(1,6)-linkages in amylopectin and pullulan. This group does not contain the conserved catalytic triad present in other alpha-amylase-like proteins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 347
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|199886 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme and bacterial isoamylase (also called glycogen 6-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes Back     alignment and domain information
>gnl|CDD|200477 cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme) Back     alignment and domain information
>gnl|CDD|217288 pfam02922, CBM_48, Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Back     alignment and domain information
>gnl|CDD|214758 smart00642, Aamy, Alpha-amylase domain Back     alignment and domain information
>gnl|CDD|200476 cd11337, AmyAc_CMD_like, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain Back     alignment and domain information
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase Back     alignment and domain information
>gnl|CDD|233729 TIGR02103, pullul_strch, alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>gnl|CDD|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins Back     alignment and domain information
>gnl|CDD|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|233851 TIGR02403, trehalose_treC, alpha,alpha-phosphotrehalase Back     alignment and domain information
>gnl|CDD|200473 cd11334, AmyAc_TreS, Alpha amylase catalytic domain found in Trehalose synthetase Back     alignment and domain information
>gnl|CDD|200467 cd11328, AmyAc_maltase, Alpha amylase catalytic domain found in maltase (also known as alpha glucosidase) and related proteins Back     alignment and domain information
>gnl|CDD|215246 PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>gnl|CDD|139075 PRK12568, PRK12568, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|199893 cd11234, E_set_GDE_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme Back     alignment and domain information
>gnl|CDD|200479 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200474 cd11335, AmyAc_MTase_N, Alpha amylase catalytic domain found in maltosyltransferase Back     alignment and domain information
>gnl|CDD|200458 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|178782 PLN03244, PLN03244, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|200463 cd11324, AmyAc_Amylosucrase, Alpha amylase catalytic domain found in Amylosucrase Back     alignment and domain information
>gnl|CDD|236759 PRK10785, PRK10785, maltodextrin glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|215519 PLN02960, PLN02960, alpha-amylase Back     alignment and domain information
>gnl|CDD|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|236543 PRK09505, malS, alpha-amylase; Reviewed Back     alignment and domain information
>gnl|CDD|200472 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins Back     alignment and domain information
>gnl|CDD|233874 TIGR02456, treS_nterm, trehalose synthase Back     alignment and domain information
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 878
TIGR02100688 glgX_debranch glycogen debranching enzyme GlgX. Th 100.0
PRK03705658 glycogen debranching enzyme; Provisional 100.0
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 100.0
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 100.0
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 100.0
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 100.0
PLN02877970 alpha-amylase/limit dextrinase 100.0
TIGR02103898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 100.0
KOG0470757 consensus 1,4-alpha-glucan branching enzyme/starch 100.0
PRK12568730 glycogen branching enzyme; Provisional 100.0
PRK14706639 glycogen branching enzyme; Provisional 100.0
PRK12313633 glycogen branching enzyme; Provisional 100.0
PRK05402726 glycogen branching enzyme; Provisional 100.0
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 100.0
PLN02447758 1,4-alpha-glucan-branching enzyme 100.0
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 100.0
PRK147051224 glycogen branching enzyme; Provisional 100.0
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 100.0
PLN02960897 alpha-amylase 100.0
PRK10785598 maltodextrin glucosidase; Provisional 100.0
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 100.0
TIGR02403543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 100.0
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 100.0
PRK09505683 malS alpha-amylase; Reviewed 100.0
PLN03244872 alpha-amylase; Provisional 100.0
PRK09441479 cytoplasmic alpha-amylase; Reviewed 100.0
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 100.0
PLN02784894 alpha-amylase 100.0
PLN00196428 alpha-amylase; Provisional 100.0
PLN02361401 alpha-amylase 100.0
COG0366505 AmyA Glycosidases [Carbohydrate transport and meta 100.0
PRK13840495 sucrose phosphorylase; Provisional 100.0
TIGR03852470 sucrose_gtfA sucrose phosphorylase. In the forward 100.0
KOG0471545 consensus Alpha-amylase [Carbohydrate transport an 100.0
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 100.0
TIGR02401 825 trehalose_TreY malto-oligosyltrehalose synthase. T 99.96
PRK14511 879 maltooligosyl trehalose synthase; Provisional 99.9
smart00642166 Aamy Alpha-amylase domain. 99.86
KOG2212504 consensus Alpha-amylase [Carbohydrate transport an 99.83
PF14872811 GHL5: Hypothetical glycoside hydrolase 5 99.79
cd02852119 Isoamylase_N_term Isoamylase N-terminus domain. Is 99.7
cd02856103 Glycogen_debranching_enzyme_N_term Glycogen_debran 99.66
cd02860100 Pullulanase_N_term Pullulanase domain N-terminus. 99.58
PRK14507 1693 putative bifunctional 4-alpha-glucanotransferase/m 99.56
PF0292285 CBM_48: Carbohydrate-binding module 48 (Isoamylase 99.44
cd0285385 MTHase_N_term Maltooligosyl trehalose synthase (MT 99.31
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 99.28
COG3280 889 TreY Maltooligosyl trehalose synthase [Carbohydrat 99.24
cd0285499 Glycogen_branching_enzyme_like_N_term Glycogen bra 99.14
cd02855106 Glycogen_branching_enzyme_N_term Glycogen branchin 98.97
cd0285885 Esterase_N_term Esterase N-terminal domain. Estera 98.71
PF14701423 hDGE_amylase: glucanotransferase domain of human g 98.57
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 98.4
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.26
PRK05402726 glycogen branching enzyme; Provisional 98.18
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 98.15
cd0286182 E_set_proteins_like E or "early" set-like proteins 98.03
cd0268883 E_set E or "early" set of sugar utilizing enzymes 98.01
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 97.92
PF11852168 DUF3372: Domain of unknown function (DUF3372); Int 97.69
COG1649418 Uncharacterized protein conserved in bacteria [Fun 97.56
PF02324809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 97.3
KOG3625 1521 consensus Alpha amylase [Carbohydrate transport an 97.17
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 97.13
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 97.05
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 96.93
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 96.55
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 96.48
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 96.2
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 96.17
smart0063281 Aamy_C Aamy_C domain. 96.09
PF13200316 DUF4015: Putative glycosyl hydrolase domain 96.08
PF02324 809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 95.84
PRK145101221 putative bifunctional 4-alpha-glucanotransferase/g 95.83
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 95.71
PLN02960 897 alpha-amylase 95.62
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 95.61
PLN02784894 alpha-amylase 95.58
cd0285979 AMPKbeta_GBD_like AMP-activated protein kinase (AM 94.82
PRK145071693 putative bifunctional 4-alpha-glucanotransferase/m 94.69
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 94.65
PRK10426635 alpha-glucosidase; Provisional 94.53
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 94.53
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 94.41
cd06600317 GH31_MGAM-like This family includes the following 94.35
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 94.23
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 94.16
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 94.12
PF0915457 DUF1939: Domain of unknown function (DUF1939); Int 93.47
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 93.06
PRK10658665 putative alpha-glucosidase; Provisional 92.83
cd06562348 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c 91.82
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 91.63
PF05913357 DUF871: Bacterial protein of unknown function (DUF 91.16
cd06595292 GH31_xylosidase_XylS-like This family represents a 91.1
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 90.56
PRK11052695 malQ 4-alpha-glucanotransferase; Provisional 90.35
cd06563357 GH20_chitobiase-like The chitobiase of Serratia ma 90.08
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 89.84
PLN02950 909 4-alpha-glucanotransferase 89.38
cd06564326 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( 89.07
PRK14508497 4-alpha-glucanotransferase; Provisional 88.71
PLN03244 872 alpha-amylase; Provisional 88.67
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 88.59
cd06568329 GH20_SpHex_like A subgroup of the Glycosyl hydrola 88.59
cd02742303 GH20_hexosaminidase Beta-N-acetylhexosaminidases o 88.57
PF14488166 DUF4434: Domain of unknown function (DUF4434) 88.55
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 88.22
COG1501772 Alpha-glucosidases, family 31 of glycosyl hydrolas 88.03
cd02857116 CD_pullulan_degrading_enzymes_N_term CD and pullul 86.99
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 86.79
cd06570311 GH20_chitobiase-like_1 A functionally uncharacteri 86.75
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 86.62
COG3589360 Uncharacterized conserved protein [Function unknow 86.41
PF00728351 Glyco_hydro_20: Glycosyl hydrolase family 20, cata 86.41
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 86.35
PLN02635538 disproportionating enzyme 83.86
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 83.44
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 83.07
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 82.47
PRK14508497 4-alpha-glucanotransferase; Provisional 81.92
COG3280889 TreY Maltooligosyl trehalose synthase [Carbohydrat 81.35
cd06565301 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) 81.3
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information 
Probab=100.00  E-value=1.3e-96  Score=879.02  Aligned_cols=605  Identities=34%  Similarity=0.610  Sum_probs=483.0

Q ss_pred             CCCCCCceEEecCCeEEEEEEcCCCCeEEEEEecCCCCCCCceeeccCccccCCCCEEEEEEcCCCCCceeEEEECCCcC
Q 047308          236 GVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFS  315 (878)
Q Consensus       236 g~~~~lGa~~~~~g~v~F~vwaP~A~~V~l~l~~~~~~~~~~~~~~l~~~~~~~~gvW~v~i~~~~~g~~Y~y~i~~~~~  315 (878)
                      |.+.+|||++.++| ++|+||||+|++|+|+||++.+ ..+..+++|   .++++|||+++|+++.+|.+|+|||++.+.
T Consensus         2 g~~~~LGa~~~~~g-~~F~vwap~A~~V~L~l~~~~~-~~~~~~~~m---~~~~~gvW~~~v~~~~~g~~Y~yrv~g~~~   76 (688)
T TIGR02100         2 GMPFPLGATWDGQG-VNFALFSANAEKVELCLFDAQG-EKEEARLPL---PERTDDIWHGYLPGAQPGQLYGYRVHGPYD   76 (688)
T ss_pred             CCCcCCCeEEeCCc-EEEEEECCCCCEEEEEEEcCCC-CceeeEEec---ccCCCCEEEEEECCCCCCCEEEEEEeeeeC
Confidence            67889999999887 9999999999999999997643 233345555   467889999999999999999999998777


Q ss_pred             CCCCCccccceeecCccccccccCCCCCCCC------------------CCCCCcccccccCCCCCCCCC-CCCCCCCCC
Q 047308          316 QGDGYKSHLESVLLDPYAKIIVNSIPNHHDL------------------GLPPKYLGRLCKEPDFDWGGD-VHLNLPMEK  376 (878)
Q Consensus       316 ~~~g~~~~~~~~~~DPyA~~~~~~~~~~~g~------------------~~~~~~~~~~~~~~~~~W~~~-~~~~~~~~d  376 (878)
                      |..|.++++.+.++||||+++........+.                  ..+....+.+++ +.|+|+++ ..|..+|++
T Consensus        77 ~~~g~~f~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d-~~~~w~~~~~~p~~~~~d  155 (688)
T TIGR02100        77 PENGHRFNPNKLLLDPYAKALDGDLIWDDALFGYRIGHPDQDLSFDERDSAPGMPKAVVVD-PDFDWGGDEQRPRTPWED  155 (688)
T ss_pred             CCCCcccCcCceecCcCceeecCCCcccccccccccccccccccccccccccccCceEEeC-CCCCCCCcccCCCCCccc
Confidence            8889899899999999999997431100000                  000001223333 46999987 566778999


Q ss_pred             cEEEEEecccccCCCCCCCCCCCCCCHHHHHHH--HHHHHhcCCCeEEEccCcccCCC----------CCCCCCCCCCCc
Q 047308          377 LVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEK--VHHLKDLGVNAILLEPILSFDEQ----------KGPYFPRHFFSP  444 (878)
Q Consensus       377 ~VIYevhv~~Ft~~~~s~~~~~~~Gt~~gi~~k--LdyLk~LGvt~I~L~PI~~~~~~----------~~gY~~~~yfa~  444 (878)
                      +|||||||++|+..+ ++++...+|||+||+++  |||||+|||||||||||+++...          .|||+|.+||+|
T Consensus       156 ~iIYE~hvr~Ft~~~-~~~~~~~~Gtf~Gi~~~~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~a~  234 (688)
T TIGR02100       156 TIIYEAHVKGFTQLH-PDIPEELRGTYAGLAHPAMIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNTLGFFAP  234 (688)
T ss_pred             cEEEEEEhHHhcCCC-CCCCcccccCHHHHhccchhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCccccccc
Confidence            999999999999864 44555678999999996  99999999999999999998542          379999999999


Q ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHCCCEEEEEEecccCCCC-------cCCCCCCCCCccccCC------CCCCcccc
Q 047308          445 TKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADG-------ALQGIDDSSYYYAHRG------EGIETTNV  511 (878)
Q Consensus       445 d~~yGt~~~~~~~i~elk~LV~~aH~~GI~VILDvV~NH~~~~-------~~~~~d~~~yY~~~~~------~~~~~~~d  511 (878)
                      +++||+.    ++++|||+||++||++||+|||||||||++.+       ++.++++..||..+..      +.++++++
T Consensus       235 d~~y~~~----g~~~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~~~~~~~~~~g~gn~  310 (688)
T TIGR02100       235 EPRYLAS----GQVAEFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFRGIDNASYYRLQPDDKRYYINDTGTGNT  310 (688)
T ss_pred             ChhhcCC----CCHHHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccccCCCCCcceEecCCCCceecCCCCcccc
Confidence            9999874    37899999999999999999999999999974       3556666667754431      24678899


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHhcCccEEEEccCcccccccccccCCchhHHHHHHcCccccccEEEeecCCCCCCCCCCC
Q 047308          512 LNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDT  591 (878)
Q Consensus       512 ln~~~p~Vr~~iid~l~~Wl~e~gVDGFRfD~a~~l~~~~~~~~~~~~~~~~~ia~d~~~~~~~ligE~w~~~~~~~~~~  591 (878)
                      ||+++|+||++|+++++||++||||||||||++..+.++..+ +....+++++++.++++++++||||+|+.........
T Consensus       311 ln~~~p~vr~~i~d~l~~W~~e~gIDGfR~D~a~~l~~~~~~-~~~~~~~~~~i~~d~~~~~~~ligE~W~~~~~~~~~~  389 (688)
T TIGR02100       311 LNLSHPRVLQMVMDSLRYWVTEMHVDGFRFDLATTLGRELYG-FDMLSGFFTAIRQDPVLAQVKLIAEPWDIGPGGYQVG  389 (688)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHcCCcEEEEechhhhccccCC-CcccHHHHHHHHhCcccCCeEEEEeeecCCCCccccc
Confidence            999999999999999999999999999999999988765322 1223468889988899999999999999653322223


Q ss_pred             CCCcccchhhhhhHHHHHHHHHHhcC-CcHHHHHHHHcCCCcccCC-CCCCceeeeeeccCCCCCccccccccC------
Q 047308          592 RFPHWKRWAELNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFSD-GRGPAFSFNYIARNTGLPLVDLVSFSG------  663 (878)
Q Consensus       592 ~~~~~~~~~~~n~~f~d~ir~~l~g~-~~~~~~~~~l~~s~~~f~~-~~~~~~~inyi~~HD~~tL~D~v~~~~------  663 (878)
                      .|+.  .|++||+.|++.+|.|++|. +...+++.+++++.++|.. .+.+..+||||++||++||+|+++++.      
T Consensus       390 ~~~~--~~~~~Nd~frd~ir~f~~g~~~~~~~~~~~l~gs~~~~~~~~~~~~~~iNyv~~HD~~tl~D~~~~~~khn~~n  467 (688)
T TIGR02100       390 NFPP--GWAEWNDRYRDDMRRFWRGDAGMIGELANRLTGSSDLFEHNGRRPWASINFVTAHDGFTLRDLVSYNEKHNEAN  467 (688)
T ss_pred             CCCC--ceEEecHHHHHHHHHHHcCCCCcHHHHHHHHhCCHhhccccCCCcCEEEEEEeCCCCchHHHHHHhhccchhhc
Confidence            4542  57999999999999999997 4678899999999888863 246888999999999999999998743      


Q ss_pred             -----CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCceeEecchhccccCCCC-CCCCCC---CCCCcc
Q 047308          664 -----GGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGS-PSYADR---KPFDWN  734 (878)
Q Consensus       664 -----~~~~~~~swn~g~~G~t~~~~~~~~r~~~~rla~allltspGiP~Iy~GdE~G~~~~g~-n~y~~r---~~~~W~  734 (878)
                           ++...|+|||||.+|++.+..+.+.|.+++|++++++||+||+||||||||+|+++.|+ |+|+++   ++|+|+
T Consensus       468 ge~n~dg~~~N~S~n~g~eG~~~~~~~~~~r~~~~r~~~a~l~~s~GiP~i~~GdE~g~t~~G~~n~y~~~~~~~~~dW~  547 (688)
T TIGR02100       468 GENNRDGHNDNYSWNCGVEGPTDDPAINALRRRQQRNLLATLLLSQGTPMLLAGDEFGRTQQGNNNAYCQDNEIGWVDWS  547 (688)
T ss_pred             cccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCceeeecHhhccCCCCCCCCccCCCcccccCcc
Confidence                 35567899999999999998888889999999999999999999999999999999765 788764   678998


Q ss_pred             ccccCCCccHHHHHHHHHHHHhhc--------c---------CCccc---cCCCCCCCCccCCCCcEEEEEEeccccccc
Q 047308          735 ALATGFGIQITEFISFLSSFRLKR--------K---------ENIDW---HGSDHSPPRWEDPDCKFLAMRLKVDKAESQ  794 (878)
Q Consensus       735 ~~~~~~~~~l~~f~k~Li~LRk~~--------~---------~~i~~---~g~~~~~~~~~~~~~~vlaf~R~~~~~~~~  794 (878)
                      ...  ..+++++|+|.||+|||++        .         ++++|   +|.....++|.++..++|+|.+.+....+ 
T Consensus       548 ~~~--~~~~l~~~~k~Li~lRk~~~~l~~~~~~~~~~~~~~~~~v~~~~~~G~~~~~~~w~~~~~~~l~~~l~~~~~~~-  624 (688)
T TIGR02100       548 LDE--GDDELLAFTKKLIALRKAHPVLRRERFFDGRNEADGLKDVTWLNADGEPMTEEDWENPETRLLCMVLSDMDPGG-  624 (688)
T ss_pred             ccc--ccHHHHHHHHHHHHHHHhCchhcccccccCCcccCCCCceEEeCCCCCcCChhhcCCCCCCEEEEEEeCCccCC-
Confidence            643  3578999999999999998        1         24667   45555677887656799999997632100 


Q ss_pred             ccccCCCCCCeEEEEEeCCCCcEEEEcCCCCCCCeEEEEccCCCCCCCCccCCCCceeeecCceEEEEEcCcEEEEEE
Q 047308          795 LSSESSQTKGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMKPYSCTLFE  872 (878)
Q Consensus       795 ~~~~~~~~~~~llVv~N~s~~~~~~~Lp~~~~g~~W~~l~dt~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~S~~Vl~  872 (878)
                          .....+.++|++|++.+.+++.||..+  ..|++++||....+...        . ......+.|+|+|++||+
T Consensus       625 ----~~~~~~~~~v~~N~~~~~~~~~lP~~~--~~w~~~~dt~~~~~~~~--------~-~~~~~~~~v~~~s~~vl~  687 (688)
T TIGR02100       625 ----DPGADDSLLLLLNAGPEPVPFKLPGGG--GRWELVLDTADEEAPGI--------H-LDAGQEAELPARSVLLLR  687 (688)
T ss_pred             ----CCCCCCeEEEEECCCCCCeEEECCCCC--CcEEEEecCCCCCCccc--------c-ccCCCEEEEcCCEEEEEe
Confidence                001236799999999999999999743  58999999975332111        0 111346899999999986

This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF14872 GHL5: Hypothetical glycoside hydrolase 5 Back     alignment and domain information
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain Back     alignment and domain information
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain Back     alignment and domain information
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain Back     alignment and domain information
>cd02855 Glycogen_branching_enzyme_N_term Glycogen branching enzyme N-terminus domain Back     alignment and domain information
>cd02858 Esterase_N_term Esterase N-terminal domain Back     alignment and domain information
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>cd02861 E_set_proteins_like E or "early" set-like proteins Back     alignment and domain information
>cd02688 E_set E or "early" set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD) Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF09154 DUF1939: Domain of unknown function (DUF1939); InterPro: IPR015237 This entry represents a C-terminal domain associated with prokaryotic alpha-amylases Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>PRK11052 malQ 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02950 4-alpha-glucanotransferase Back     alignment and domain information
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins Back     alignment and domain information
>PRK14508 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) Back     alignment and domain information
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02857 CD_pullulan_degrading_enzymes_N_term CD and pullulan-degrading enzymes N-terminus domain Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>COG3589 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3 Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>PLN02635 disproportionating enzyme Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14508 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query878
2vnc_A718 Crystal Structure Of Glycogen Debranching Enzyme Tr 5e-70
2wsk_A657 Crystal Structure Of Glycogen Debranching Enzyme Gl 4e-48
1bf2_A750 Structure Of Pseudomonas Isoamylase Length = 750 1e-27
2ya1_A1014 Product Complex Of A Multi-Modular Glycogen-Degradi 1e-14
2ya0_A714 Catalytic Module Of The Multi-Modular Glycogen-Degr 1e-14
2ya2_A708 Catalytic Module Of The Multi-Modular Glycogen-Degr 1e-14
3faw_A877 Crystal Structure Of The Group B Streptococcus Pull 2e-14
2wan_A921 Pullulanase From Bacillus Acidopullulyticus Length 2e-13
3vgd_A558 Ctystal Structure Of Glycosyltrehalose Trehalohydro 6e-10
3vge_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 7e-10
3vgg_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 7e-10
1eha_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 8e-10
1eh9_A558 Crystal Structure Of Sulfolobus Solfataricus Glycos 8e-10
2e8y_A718 Crystal Structure Of Pullulanase Type I From Bacill 6e-08
2bhu_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 2e-07
2bhy_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 4e-07
3m07_A618 1.4 Angstrom Resolution Crystal Structure Of Putati 7e-07
1ea9_C583 Cyclomaltodextrinase Length = 583 7e-07
3aml_A755 Structure Of The Starch Branching Enzyme I (Bei) Fr 2e-06
3amk_A702 Structure Of The Starch Branching Enzyme I (Bei) Fr 2e-06
2y4s_A884 Barley Limit Dextrinase In Complex With Beta-Cyclod 3e-06
3dhu_A449 Crystal Structure Of An Alpha-Amylase From Lactobac 1e-05
2z1k_A475 Crystal Structure Of Ttha1563 From Thermus Thermoph 4e-05
1sma_A588 Crystal Structure Of A Maltogenic Amylase Length = 6e-05
1gvi_A588 Thermus Maltogenic Amylase In Complex With Beta-Cd 7e-05
4gkl_A422 Crystal Structure Of A Noncanonic Maltogenic Alpha- 1e-04
1j0h_A588 Crystal Structure Of Bacillus Stearothermophilus Ne 7e-04
>pdb|2VNC|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus Length = 718 Back     alignment and structure 
Iteration: 1

 Score =  262 bits (670), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 185/565 (32%), Positives = 288/565 (50%), Gaps = 70/565 (12%)
Query: 233 LNAGVPSPMGLSF-STDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGD 291
           L  G P P+G ++   D  +NF++FS +A+ V L LY  T    P   +++    N++GD
Sbjct: 12  LRPGDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQKYPKEIIEVK---NKTGD 68
Query: 292 IWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSI----------- 340
           IWH  +        Y YR  G +    G + +   VL+DPYAK I  S+           
Sbjct: 69  IWHVFVPGLRPGQLYAYRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKI 128
Query: 341 -PNHHDLGLPPKYLGR-----LCKEPDFDWGGDVHLN---LPMEKLVVYRLNVMRFSEHK 391
              + DL    +  G      +   P F+W  +  +    +P++  V+Y ++V  F++ +
Sbjct: 129 GDQNQDLTYDERDSGEYVPKSVVINPYFEWDDEDFIKGKKVPLKDTVIYEVHVKGFTKLR 188
Query: 392 SSKLPPDIAGTFSGVT--EKVHHLKDLGVNAILLEPILSFDEQK----------GPYFPR 439
              LP +I GT+ G+   + + +LKDLG+  + L P+  F +Q+            Y P 
Sbjct: 189 LD-LPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPI 247
Query: 440 HFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADG-------ALQGI 492
           +FFSP   +  +      + S K+MV +LH  GIEV+++VV+  TA+G       + +GI
Sbjct: 248 NFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGI 307
Query: 493 DDSSYYY------AHRGEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASS 546
           D+++YY        +  +   T N LN ++P V QM+L+SLR+WVTE H+DGF F  A++
Sbjct: 308 DNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAA 367
Query: 547 LLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNF 606
           L R  +   +     I A+  DP+LS+ KLIA+ WD      +   FP+  +WAE N  +
Sbjct: 368 LARELYSVNMLNTFFI-ALQQDPILSQVKLIAEPWDVGQGGYQVGNFPY--QWAEWNGKY 424
Query: 607 CNDVRNFFRGEGL-LSDLATRLCGSGDIF-SDGRGPAFSFNYIARNTGLPLVDLVSFSG- 663
            + +R F+RGE L  S++A RL GS DI+  + + P  S NY+  + G  L DLVS++  
Sbjct: 425 RDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSHDGFTLEDLVSYNQK 484
Query: 664 ----------GGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGD 713
                      G+    SWNCG EGPT    V+  R KQ RNF+  L VS G P++  GD
Sbjct: 485 HNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMILGGD 544
Query: 714 ECGQSSWGSPSY----ADRKPFDWN 734
           E  ++  G+ +      +   FDWN
Sbjct: 545 ELSRTQRGNNNAFCQDNEITWFDWN 569
>pdb|2WSK|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Glgx From Escherichia Coli K-12 Length = 657 Back     alignment and structure
>pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 Back     alignment and structure
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 Back     alignment and structure
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 Back     alignment and structure
>pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 Back     alignment and structure
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase Sap Length = 877 Back     alignment and structure
>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus Length = 921 Back     alignment and structure
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase (D252e) Length = 558 Back     alignment and structure
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (D252s) Length = 558 Back     alignment and structure
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (E283q) Complexed With Maltoheptaose Length = 558 Back     alignment and structure
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus Length = 558 Back     alignment and structure
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase Length = 558 Back     alignment and structure
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus Subtilis Str. 168 Length = 718 Back     alignment and structure
>pdb|2BHU|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase Length = 602 Back     alignment and structure
>pdb|2BHY|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase In Complex With Trehalose Length = 602 Back     alignment and structure
>pdb|3M07|A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative Alpha Amylase From Salmonella Typhimurium Length = 618 Back     alignment and structure
>pdb|1EA9|C Chain C, Cyclomaltodextrinase Length = 583 Back     alignment and structure
>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 755 Back     alignment and structure
>pdb|3AMK|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 702 Back     alignment and structure
>pdb|2Y4S|A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin Length = 884 Back     alignment and structure
>pdb|3DHU|A Chain A, Crystal Structure Of An Alpha-Amylase From Lactobacillus Plantarum Length = 449 Back     alignment and structure
>pdb|2Z1K|A Chain A, Crystal Structure Of Ttha1563 From Thermus Thermophilus Hb8 Length = 475 Back     alignment and structure
>pdb|1SMA|A Chain A, Crystal Structure Of A Maltogenic Amylase Length = 588 Back     alignment and structure
>pdb|1GVI|A Chain A, Thermus Maltogenic Amylase In Complex With Beta-Cd Length = 588 Back     alignment and structure
>pdb|4GKL|A Chain A, Crystal Structure Of A Noncanonic Maltogenic Alpha-amylase Amyb From Thermotoga Neapolitana Length = 422 Back     alignment and structure
>pdb|1J0H|A Chain A, Crystal Structure Of Bacillus Stearothermophilus Neopullulanase Length = 588 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query878
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 1e-150
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 1e-145
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 1e-141
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 1e-102
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 1e-102
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 1e-99
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 4e-95
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 6e-94
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 2e-84
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 5e-54
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 3e-21
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 3e-15
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 1e-13
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 3e-13
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 6e-13
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 6e-13
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 2e-12
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 7e-12
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 1e-11
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 2e-11
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 4e-11
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 5e-11
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 7e-11
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 9e-11
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 1e-10
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 2e-10
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 3e-10
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 2e-09
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 3e-09
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 1e-08
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 2e-08
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 6e-08
3aml_A755 OS06G0726400 protein; starch-branching, transferas 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 2e-07
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 3e-07
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 1e-06
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 1e-06
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 2e-06
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 2e-06
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 4e-05
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 9e-05
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 9e-05
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 1e-04
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 1e-04
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 2e-04
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 2e-04
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 2e-04
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 3e-04
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 5e-04
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 8e-04
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
 Score =  458 bits (1181), Expect = e-150
 Identities = 205/739 (27%), Positives = 330/739 (44%), Gaps = 133/739 (17%)

Query: 233 LNAGVPSPMGLSFSTDGS-LNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGD 291
           L  G P P+G ++  D   +NF++FS +A+ V L LY  T    P   +++    N++GD
Sbjct: 12  LRPGDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQKYPKEIIEVK---NKTGD 68

Query: 292 IWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNH-----HDL 346
           IWH  +        Y YR  G +    G + +   VL+DPYAK I  S+  +     + +
Sbjct: 69  IWHVFVPGLRPGQLYAYRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKI 128

Query: 347 GLPPKYLGRLCK------------EPDFDWGGDV---HLNLPMEKLVVYRLNVMRFSEHK 391
           G   + L    +             P F+W  +       +P++  V+Y ++V  F++ +
Sbjct: 129 GDQNQDLTYDERDSGEYVPKSVVINPYFEWDDEDFIKGKKVPLKDTVIYEVHVKGFTKLR 188

Query: 392 SSKLPPDIAGTFSGVTEK--VHHLKDLGVNAILLEPILSFDEQKGP----------YFPR 439
              LP +I GT+ G+  +  + +LKDLG+  + L P+  F +Q+            Y P 
Sbjct: 189 LD-LPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPI 247

Query: 440 HFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADG-------ALQGI 492
           +FFSP   +  +      + S K+MV +LH  GIEV+++VV+  TA+G       + +GI
Sbjct: 248 NFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGI 307

Query: 493 DDSSYYY---AHRGEGIETT---NVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASS 546
           D+++YY     ++   ++ T   N LN ++P V QM+L+SLR+WVTE H+DGF F  A++
Sbjct: 308 DNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAA 367

Query: 547 LLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWD--PHG--VAPKDTRFPHWKRWAEL 602
           L R  +           A+  DP+LS+ KLIA+ WD    G  V      FP+  +WAE 
Sbjct: 368 LARELYS-VNMLNTFFIALQQDPILSQVKLIAEPWDVGQGGYQVG----NFPY--QWAEW 420

Query: 603 NTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFS-DGRGPAFSFNYIARNTGLPLVDLVS 660
           N  + + +R F+RGE    S++A RL GS DI+  + + P  S NY+  + G  L DLVS
Sbjct: 421 NGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSHDGFTLEDLVS 480

Query: 661 FSG------G-----GLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPIL 709
           ++       G     G+    SWNCG EGPT    V+  R KQ RNF+  L VS G P++
Sbjct: 481 YNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMI 540

Query: 710 NMGDECGQS--------------SWGSPSYADRKPFDWNALATGFGIQITEFISFLSSFR 755
             GDE  ++              +W          FDWN           EF+  +  F 
Sbjct: 541 LGGDELSRTQRGNNNAFCQDNEITW----------FDWNLDERKSK--FLEFVKKMIQFY 588

Query: 756 -----LKRKE-------------NIDW---HGSDHSPPRWEDPDCKFLAMRLKVDKAESQ 794
                 +R+              ++ +    G +     W  P  + +   L+    +  
Sbjct: 589 RAHPAFRRERYFQGKKLFGMPLKDVTFYTLEGREVDEKTWSSPT-QLVIFVLEGSVMDEI 647

Query: 795 LSSESSQTKGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQ 854
                        I  NA  ++  V  P       W  ++ + L        E KP    
Sbjct: 648 NMYGERIADDSFLIILNANPNNVKVKFPKGK----WELVISSYLR-------EIKPEERI 696

Query: 855 MAGLYTYEMKPYSCTLFEA 873
           + G    E++  +  ++  
Sbjct: 697 IEGEKELEIEGRTALVYRR 715
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Length = 695 Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Length = 686 Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Length = 637 Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Length = 515 Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Length = 644 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Length = 441 Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Length = 628 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Length = 722 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Length = 704 Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Length = 617 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query878
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 100.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 100.0
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 100.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 100.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 100.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 100.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 100.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 100.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 100.0
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 100.0
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 100.0
3aml_A755 OS06G0726400 protein; starch-branching, transferas 100.0
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 100.0
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 100.0
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 100.0
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 100.0
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 100.0
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 100.0
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 100.0
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 100.0
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 100.0
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 100.0
4aef_A645 Neopullulanase (alpha-amylase II); hydrolase, ther 100.0
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 100.0
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 100.0
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 100.0
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 100.0
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 100.0
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 100.0
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 100.0
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 100.0
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 100.0
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 100.0
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 100.0
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 100.0
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 100.0
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 100.0
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 100.0
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 100.0
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 100.0
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 100.0
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 100.0
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 100.0
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 100.0
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 100.0
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 100.0
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 100.0
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 100.0
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 100.0
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 100.0
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 100.0
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 100.0
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 100.0
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 100.0
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 100.0
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 100.0
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 100.0
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 100.0
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 100.0
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 100.0
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 100.0
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 100.0
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 99.89
3aie_A 844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.87
3klk_A 1039 Glucansucrase; native form, open conformation, mul 99.79
3klk_A1039 Glucansucrase; native form, open conformation, mul 99.77
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.77
3ttq_A1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.71
3ttq_A 1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.03
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 98.1
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 98.0
1z0n_A96 5'-AMP-activated protein kinase, beta-1 subunit; b 97.95
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 97.57
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 97.29
3hje_A704 704AA long hypothetical glycosyltransferase; treha 96.85
3vmn_A643 Dextranase; TIM barrel, immunoglobrin fold, greek- 96.81
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 96.53
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 96.31
2g3m_A693 Maltase, alpha-glucosidase; hydrolase, glycoside h 94.78
2f2h_A773 Putative family 31 glucosidase YICI; BETA8alpha8 b 94.64
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 94.61
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 94.27
3lpp_A898 Sucrase-isomaltase; glycoside hydrolase family 31, 94.25
3l4y_A875 Maltase-glucoamylase, intestinal; glycoside hydrol 94.04
1x7f_A385 Outer surface protein; structural genomics, unknow 93.14
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 92.64
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 92.63
3nsx_A666 Alpha-glucosidase; structural genomics, PSI-2, pro 92.57
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 92.55
4ba0_A817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 92.47
3nme_A294 Ptpkis1 protein, SEX4 glucan phosphatase; dual spe 92.08
2p0o_A372 Hypothetical protein DUF871; structural genomics, 92.06
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 92.0
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 91.18
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 89.94
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 89.61
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 89.32
3gyc_A393 Putative glycoside hydrolase; YP_001304622.1, stru 88.79
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 88.53
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 88.41
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 88.19
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 88.18
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 88.16
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 87.42
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 87.38
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 87.2
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 87.19
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 86.47
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 86.27
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 85.97
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 85.95
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 85.61
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 85.52
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 85.45
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 85.41
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 85.33
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 85.03
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 84.92
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 84.59
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 84.53
2qlv_B252 Protein SIP2, protein SPM2; heterotrimer, ATP-bind 84.42
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 84.33
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 84.17
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 84.04
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 83.84
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 82.66
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 82.59
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 82.4
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 82.24
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 81.94
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 81.79
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 81.53
3ozo_A572 N-acetylglucosaminidase; beta-N-acetyl-D-hexosamin 81.51
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 81.15
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 81.06
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 80.76
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 80.42
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 80.28
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Back     alignment and structure
Probab=100.00  E-value=3.1e-89  Score=828.95  Aligned_cols=617  Identities=32%  Similarity=0.549  Sum_probs=477.2

Q ss_pred             CCCCCCCCCceEE--ecCCeEEEEEEcCCCCeEEEEEecCCCCCCCceeeccCccccCCCCEEEEEEcCCCCCceeEEEE
Q 047308          233 LNAGVPSPMGLSF--STDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRF  310 (878)
Q Consensus       233 ~~~g~~~~lGa~~--~~~g~v~F~vwaP~A~~V~l~l~~~~~~~~~~~~~~l~~~~~~~~gvW~v~i~~~~~g~~Y~y~i  310 (878)
                      +..|.+.||||++  .++| |+|+||||+|++|+|++|++.+...+..+++|.   +.++|+|+++|+++..|..|+|+|
T Consensus        12 ~~~g~~~~lGa~~~~~~~g-~~F~vwap~A~~V~l~lf~~~~~~~~~~~~~m~---~~~~gvw~~~v~~~~~g~~Y~y~v   87 (718)
T 2vr5_A           12 LRPGDPYPLGSNWIEDDDG-VNFSLFSENAEKVELLLYSLTNQKYPKEIIEVK---NKTGDIWHVFVPGLRPGQLYAYRV   87 (718)
T ss_dssp             CBCCCSCSSEEEEEGGGTE-EEEEEECSSCSEEEEEECCSSCCSSCSEEEEEC---EESSSEEEEEEETCCTTCEEEEEE
T ss_pred             ccCCCCCCCcceEeeCCCe-EEEEEECCCCCEEEEEEEcCCCCCCcceEEeCc---cCCCCEEEEEeCCCCCCCEEEEEE
Confidence            4578899999999  5554 999999999999999999764322334567664   467899999999999999999999


Q ss_pred             CCCcCCCCCCccccceeecCccccccccCCCCCC-------CCC-----C---C--CCcccccccCCCCCCCCC---CCC
Q 047308          311 KGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHH-------DLG-----L---P--PKYLGRLCKEPDFDWGGD---VHL  370 (878)
Q Consensus       311 ~~~~~~~~g~~~~~~~~~~DPyA~~~~~~~~~~~-------g~~-----~---~--~~~~~~~~~~~~~~W~~~---~~~  370 (878)
                      .+.+.|..|.++++.+.++||||+++........       |..     .   +  .....+++..+.|+|+++   .+|
T Consensus        88 ~g~~~p~~g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~s~v~d~~~~W~~~~~~~~~  167 (718)
T 2vr5_A           88 YGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKIGDQNQDLTYDERDSGEYVPKSVVINPYFEWDDEDFIKGK  167 (718)
T ss_dssp             ECCEETTTTEECCTTSCBCCTTCSCBCSCCCCCGGGSSSCSSCTTTTTSCCCCCCTTTSCCEECCCCCCCCTTGGGGSSS
T ss_pred             eeecCcccCcccCCCceEcCcCccccccCccccccccccccCCcccccccccccccccccceEEecCCcCCCccccccCC
Confidence            9876777888888888999999999873211000       100     0   0  001122333346999998   778


Q ss_pred             CCCCCCcEEEEEecccccCCCCCCCCCCCCCCHHHHHHH--HHHHHhcCCCeEEEccCcccCCC----------CCCCCC
Q 047308          371 NLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEK--VHHLKDLGVNAILLEPILSFDEQ----------KGPYFP  438 (878)
Q Consensus       371 ~~~~~d~VIYevhv~~Ft~~~~s~~~~~~~Gt~~gi~~k--LdyLk~LGvt~I~L~PI~~~~~~----------~~gY~~  438 (878)
                      ..+|+++|||||||++|++.+++ .+...+|||+||+++  |+|||+||||+||||||+++...          .|||++
T Consensus       168 ~~~~~~~vIYeihv~~f~~~~~~-~~~~~~Gt~~gi~~~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~  246 (718)
T 2vr5_A          168 KVPLKDTVIYEVHVKGFTKLRLD-LPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDP  246 (718)
T ss_dssp             CCCTTSCCEEEECTTTTTTTCTT-SCTTSTTSHHHHTSHHHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCB
T ss_pred             CCChhHCEEEEEEcchhhcCCCC-CCcccCcCHHHHhcchhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCc
Confidence            88899999999999999985432 334578999999999  99999999999999999998653          369999


Q ss_pred             CCCCCccCCCCCCCCCcchHHHHHHHHHHHHHCCCEEEEEEecccCCCCc-------CCCCCCCCCccccC------CCC
Q 047308          439 RHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGA-------LQGIDDSSYYYAHR------GEG  505 (878)
Q Consensus       439 ~~yfa~d~~yGt~~~~~~~i~elk~LV~~aH~~GI~VILDvV~NH~~~~~-------~~~~d~~~yY~~~~------~~~  505 (878)
                      .+||+|+++||++.++..+++|||+||++||++||+||||||+||++.+.       +.+++++.||...+      .+.
T Consensus       247 ~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~~~~~  326 (718)
T 2vr5_A          247 INFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRYYLDF  326 (718)
T ss_dssp             SCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEEECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSSBCCS
T ss_pred             ccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEEEeccCcccCccccCccccccCCCCCcceEeCCCCCceeecC
Confidence            99999999999976666779999999999999999999999999999853       23345667776542      124


Q ss_pred             CCcccccCCCCHHHHHHHHHHHHHHHHhcCccEEEEccCcccccccccccCCchhHHHHHHcCccccccEEEeecCCCCC
Q 047308          506 IETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLSRPPLIEAIAFDPLLSKAKLIADYWDPHG  585 (878)
Q Consensus       506 ~~~~~dln~~~p~Vr~~iid~l~~Wl~e~gVDGFRfD~a~~l~~~~~~~~~~~~~~~~~ia~d~~~~~~~ligE~w~~~~  585 (878)
                      ++++++||++||+||++|+++++||++||||||||||+|+++.++++. +....+++++++.++..+++++|||.|....
T Consensus       327 ~~~~~~ln~~~p~v~~~i~d~l~~W~~e~gvDGfR~D~~~~l~~~~~~-~~~~~~~~~~i~~~~~~~~~~liaE~w~~~~  405 (718)
T 2vr5_A          327 TGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAALARELYS-VNMLNTFFIALQQDPILSQVKLIAEPWDVGQ  405 (718)
T ss_dssp             SSSSCCBCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTGGGGGBSSSS-BCTTCHHHHHHHHCTTGGGSEEEECCBCSST
T ss_pred             CCccCeecCCCHHHHHHHHHHHHHHHHHcCCCEEEEcchhhhhhccCC-ccchHHHHHHHHhCcccCCcEEEecccccCC
Confidence            578899999999999999999999999999999999999999887652 3334467888888888899999999998654


Q ss_pred             CCCCCCCCCcccchhhhhhHHHHHHHHHHhcC-CcHHHHHHHHcCCCcccCC-CCCCceeeeeeccCCCCCccccccccC
Q 047308          586 VAPKDTRFPHWKRWAELNTNFCNDVRNFFRGE-GLLSDLATRLCGSGDIFSD-GRGPAFSFNYIARNTGLPLVDLVSFSG  663 (878)
Q Consensus       586 ~~~~~~~~~~~~~~~~~n~~f~d~ir~~l~g~-~~~~~~~~~l~~s~~~f~~-~~~~~~~inyi~~HD~~tL~D~v~~~~  663 (878)
                      ......+|+  ..|++||+.|++.++.|++|+ ....+++..+.++..+|.. ++.+..++||+++||+++|.|++++..
T Consensus       406 ~~~~~~~f~--~~~~~wn~~~r~~~~~f~~g~~~~~~~~~~~l~~~~~~y~~~~~~p~~~vnf~~~HD~~~l~dl~~~~~  483 (718)
T 2vr5_A          406 GGYQVGNFP--YQWAEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSHDGFTLEDLVSYNQ  483 (718)
T ss_dssp             TCBCTTCSC--TTEEEECHHHHHHHHHHHHTCCEEHHHHHHHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHSSCSS
T ss_pred             CcccccCCc--hhHHHHhHHHHHHHHHHHcCCcchHHHHHHHHhcchhhhcccCCCcceeeeeeecCCCCCHHHHHHHhh
Confidence            322223454  346789999999999999987 4677888888877666642 245778999999999999999987643


Q ss_pred             -----------CCCCCcccccCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCceeEecchhccccCCCC-CCCCC---C
Q 047308          664 -----------GGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILNMGDECGQSSWGS-PSYAD---R  728 (878)
Q Consensus       664 -----------~~~~~~~swn~g~~G~t~~~~~~~~r~~~~rla~allltspGiP~Iy~GdE~G~~~~g~-n~y~~---r  728 (878)
                                 ++...+.+|+++.+|++.++.....+.+++|++++++|++||+||||||||+|+++.|+ |+|++   +
T Consensus       484 k~~~~~g~~~~dg~~~n~sw~~~~~g~~~~~~~~~~~~~~~r~a~a~ll~~~G~P~iy~GdE~G~~~~G~~~~y~~~~~~  563 (718)
T 2vr5_A          484 KHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMILGGDELSRTQRGNNNAFCQDNEI  563 (718)
T ss_dssp             CCCGGGSSTTCCSCSCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHTTSSSEEEEETTTTTTCCCTTCSCCTTCCSTT
T ss_pred             hhhhhcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCcEEEechhhcccCCCCCCcccCCccc
Confidence                       23345679999999999888777778889999999999999999999999999998775 57764   4


Q ss_pred             CCCCccccccCCCccHHHHHHHHHHHHhhc----cC--------------Cccc---cCCCCCCCCccCCCCcEEEEEEe
Q 047308          729 KPFDWNALATGFGIQITEFISFLSSFRLKR----KE--------------NIDW---HGSDHSPPRWEDPDCKFLAMRLK  787 (878)
Q Consensus       729 ~~~~W~~~~~~~~~~l~~f~k~Li~LRk~~----~~--------------~i~~---~g~~~~~~~~~~~~~~vlaf~R~  787 (878)
                      ++|+|+....  ..++++|+|+||+|||++    ..              ++.|   +|...+..+|.+ ..++|+|.|.
T Consensus       564 ~~~~W~~~~~--~~~l~~~~~~Li~lRk~~pal~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~la~~r~  640 (718)
T 2vr5_A          564 TWFDWNLDER--KSKFLEFVKKMIQFYRAHPAFRRERYFQGKKLFGMPLKDVTFYTLEGREVDEKTWSS-PTQLVIFVLE  640 (718)
T ss_dssp             TSCCCCCCHH--HHHHHHHHHHHHHHHHHCGGGSCSSCCCSSBCTTCSSBSEEEECSSSCBCCTTTTTS-EESEEEEEEE
T ss_pred             cccCcccccc--chHHHHHHHHHHHHHhhCcccccCcccccccccccCCCceEEECCCCCcCCccccCC-CCCEEEEEEe
Confidence            5688886432  468999999999999987    11              2333   233334455643 2589999997


Q ss_pred             cccccccccccCCCC---CCeEEEEEeCCCCcEEEEcCCCCCCCeEEEEccCCCCCCCCccCCCCceeeecCceEEEEEc
Q 047308          788 VDKAESQLSSESSQT---KGDLYIACNAADHSESVVLPPPPEGMTWHHLVDTALPFPGFFSTEGKPVLEQMAGLYTYEMK  864 (878)
Q Consensus       788 ~~~~~~~~~~~~~~~---~~~llVv~N~s~~~~~~~Lp~~~~g~~W~~l~dt~~~~~~~~~~~~~~~~~~~~~~~~~~vp  864 (878)
                      +......   +....   .+.++|++|++.+++++.||..+.+..|+++++|+....       .    ......+++||
T Consensus       641 ~~~~~~~---~~~~~~~~~~~ilv~~N~~~~~~~~~lp~~~~g~~w~~l~~t~~~~~-------~----~~~~~~~~~l~  706 (718)
T 2vr5_A          641 GSVMDEI---NMYGERIADDSFLIILNANPNNVKVKFPKGKWELVISSYLREIKPEE-------R----IIEGEKELEIE  706 (718)
T ss_dssp             GGGCCCB---CTTSCBCCCCEEEEEEECCSSCEEEECCSSEEEEEEESCCSCCCTTS-------S----CCCTTCEEEEC
T ss_pred             CCccccc---cccccccCCCeEEEEECCCCCcEEEECCCCCCCCeEEEEecCCCCcc-------c----cccCCCeEEEC
Confidence            5210000   00001   568999999999999999997655568999999875321       0    11223468899


Q ss_pred             CcEEEEEEEc
Q 047308          865 PYSCTLFEAS  874 (878)
Q Consensus       865 ~~S~~Vl~~~  874 (878)
                      |+|++||+..
T Consensus       707 ~~s~~vl~~~  716 (718)
T 2vr5_A          707 GRTALVYRRI  716 (718)
T ss_dssp             SSEEEEEEEE
T ss_pred             CcEEEEEEec
Confidence            9999999863
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1 Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A* Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 878
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 1e-47
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 2e-29
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 9e-28
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 3e-27
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 1e-25
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 5e-23
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 7e-09
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 6e-23
d1wzla3382 c.1.8.1 (A:121-502) Maltogenic amylase, central do 3e-21
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 5e-21
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 2e-20
d2guya2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 5e-18
d1bf2a2113 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amylo 1e-17
d2aaaa2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 3e-17
d1ea9c3382 c.1.8.1 (C:122-503) Maltogenic amylase, central do 4e-17
d1g5aa2554 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc 6e-17
d1jaea2378 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea 7e-16
d1qhoa4407 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase 2e-15
d1h3ga3422 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d 4e-15
d1lwha2391 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther 2e-14
d1ud2a2390 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu 4e-14
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 1e-13
d1mxga2361 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo 2e-13
d1gcya2357 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m 4e-13
d3bmva4406 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase 2e-12
d1ji1a3432 c.1.8.1 (A:123-554) Maltogenic amylase, central do 2e-12
d2d3na2394 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu 3e-12
d1bf2a1162 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N 5e-12
d1ht6a2347 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor 8e-12
d1e43a2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera 9e-12
d1iv8a2 653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 6e-11
d2fhfa1115 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella 1e-10
d1hvxa2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu 1e-10
d1ua7a2344 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu 8e-10
d1g94a2354 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa 1e-09
d1hx0a2403 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s 4e-09
d1r7aa2434 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac 4e-09
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

 Score =  174 bits (442), Expect = 1e-47
 Identities = 97/469 (20%), Positives = 169/469 (36%), Gaps = 85/469 (18%)

Query: 364 WGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILL 423
                      +  V+Y ++V  F+E  +S +P    GT+ G   K  +L  LGV A+  
Sbjct: 4   QSTGTKPTRAQKDDVIYEVHVRGFTEQDTS-IPAQYRGTYYGAGLKASYLASLGVTAVEF 62

Query: 424 EPILSFDEQKGP-------------YFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHA 470
            P+                      Y   ++FSP + +  ++ +       + MV+  H 
Sbjct: 63  LPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHN 122

Query: 471 NGIEVLLEVVFTRTADGALQGIDDSSYYYAHRGEGIE-------------------TTNV 511
            GI+V ++VV+  TA+G      D +    +   G++                       
Sbjct: 123 AGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGAN 182

Query: 512 LNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGF-HGEYLSRPPLI-------E 563
            N      Q +I++SL +W     +DGF F  AS L     +G Y +  P         +
Sbjct: 183 FNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFD 242

Query: 564 AIAFDPLLSK---------------AKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCN 608
           A   +  +++                 L A+ W   G + +   FP    W+E N  F +
Sbjct: 243 AADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ--GWSEWNGLFRD 300

Query: 609 DVRNFFRGEGLLSD----LATRLCGSGDIF-SDGRGPAFSFNYIARNTGLPLVDLVSFSG 663
            +R      G ++      A    GS ++F S GR P  S N+I  + G+ L D+ S +G
Sbjct: 301 SLRQAQNELGSMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNG 360

Query: 664 -------------GGLASELSWNCGEEGPTTKTAVLERRLKQIRNFLFVLYVSLGVPILN 710
                        GG ++  SW+ G       T     + +  R  +    +S G P++ 
Sbjct: 361 ANNSQAWPYGPSDGGTSTNYSWDQGMSAG---TGAAVDQRRAARTGMAFEMLSAGTPLMQ 417

Query: 711 MGDECGQSSWGSP-SYA---DRKPFDWNALATGFGIQITEFISFLSSFR 755
            GDE  ++   +  +Y          ++            F   L +FR
Sbjct: 418 GGDEYLRTLQCNNNAYNLDSSANWLTYSWTTDQSNFY--TFAQRLIAFR 464
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 113 Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 162 Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 115 Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query878
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 100.0
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 100.0
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 100.0
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 100.0
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 100.0
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 100.0
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 100.0
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 100.0
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 100.0
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 100.0
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 100.0
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 100.0
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 100.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 100.0
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 100.0
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 100.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 100.0
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 100.0
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 100.0
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 100.0
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 100.0
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 100.0
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 100.0
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 100.0
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 100.0
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 100.0
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 100.0
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 100.0
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 100.0
d1iv8a2 653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 99.88
d1bf2a1162 Isoamylase, N-terminal domain N {Pseudomonas amylo 99.64
d2fhfa1115 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.63
d1m7xa1110 1,4-alpha-glucan branching enzyme, N-terminal doma 99.46
d1eh9a190 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.37
d2bhua197 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.19
d1bf2a2113 Isoamylase {Pseudomonas amyloderamosa [TaxId: 3204 98.95
d1m7xa2106 1,4-alpha-glucan branching enzyme {Escherichia col 98.64
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 98.37
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 98.36
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.34
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.32
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 97.91
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 97.63
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 97.48
d2d3na187 Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 96.79
d1e43a190 Bacterial alpha-Amylase {Bacillus licheniformis [T 96.78
d1ud2a190 Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [Ta 96.71
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 96.62
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 96.22
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 96.12
d2qlvb187 SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} 95.66
d1wzaa179 Bacterial alpha-Amylase {Halothermothrix orenii [T 95.54
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 95.45
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 95.32
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 95.32
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 95.29
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 95.23
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 95.16
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 95.13
d1x7fa2244 Outer surface protein, N-terminal domain {Bacillus 95.0
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 94.81
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 94.71
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 94.71
d1g94a194 Bacterial alpha-Amylase {Pseudoalteromonas halopla 94.65
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 94.47
d1cyga389 Cyclodextrin glycosyltransferase {Bacillus stearot 94.45
d2fhfa4118 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 94.29
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 93.88
d1hx0a193 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 93.8
d1z0na187 5'-AMP-activated protein kinase subunit beta-1 {Ra 93.79
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 92.1
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 91.52
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 91.37
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 91.08
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 90.3
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 90.26
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 90.06
d1jaea193 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 89.8
d1qbaa3443 Bacterial chitobiase (beta-N-acetylhexosaminidase) 89.42
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 88.83
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 88.78
d1jaka1356 beta-N-acetylhexosaminidase {Streptomyces plicatus 88.77
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 87.43
d1nowa1353 beta-hexosaminidase B {Human (Homo sapiens) [TaxId 87.01
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 86.8
d1eswa_500 Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} 85.87
d2gjxa1362 beta-hexosaminidase A {Human (Homo sapiens) [TaxId 84.76
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 83.26
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 82.93
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 82.24
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 82.01
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

Probab=100.00  E-value=7.5e-57  Score=517.89  Aligned_cols=387  Identities=23%  Similarity=0.363  Sum_probs=286.4

Q ss_pred             CCCCCCCCCCCCCcEEEEEecccccCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEccCcccCCCC----------
Q 047308          364 WGGDVHLNLPMEKLVVYRLNVMRFSEHKSSKLPPDIAGTFSGVTEKVHHLKDLGVNAILLEPILSFDEQK----------  433 (878)
Q Consensus       364 W~~~~~~~~~~~d~VIYevhv~~Ft~~~~s~~~~~~~Gt~~gi~~kLdyLk~LGvt~I~L~PI~~~~~~~----------  433 (878)
                      |....+|..+++|+|||||||++|++++++ ++.+.+|||+||++||||||+||||+||||||+++...+          
T Consensus         4 ~~~~~~~~~~~~d~viYei~v~~f~~~~~~-~~~~~~Gd~~Gi~~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~   82 (475)
T d1bf2a3           4 QSTGTKPTRAQKDDVIYEVHVRGFTEQDTS-IPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDAN   82 (475)
T ss_dssp             CCCCCCCCCCGGGCCEEEECHHHHHTTCTT-SCGGGTTSHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTT
T ss_pred             CCCCCCCCCCCcceEEEEEEhhHhccCCCC-CCccccCCHHHHHhhhHHHHHcCCCEEEeCCCCcCCCcccccccccccC
Confidence            555566777799999999999999998754 345678999999999999999999999999999985432          


Q ss_pred             ---CCCCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHCCCEEEEEEecccCCCCc-CCCCCC--CCCcc--------
Q 047308          434 ---GPYFPRHFFSPTKLHGPSRGSISAINSMKEMVKKLHANGIEVLLEVVFTRTADGA-LQGIDD--SSYYY--------  499 (878)
Q Consensus       434 ---~gY~~~~yfa~d~~yGt~~~~~~~i~elk~LV~~aH~~GI~VILDvV~NH~~~~~-~~~~d~--~~yY~--------  499 (878)
                         |||++.||++|+++|+++....|+++|||+||++||++||+||||+|+||++... +....+  ..||.        
T Consensus        83 ~~y~GY~~~d~~~vdp~y~~~~~~~Gt~~d~~~LV~~aH~~GIrVilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (475)
T d1bf2a3          83 QNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNAT  162 (475)
T ss_dssp             CCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHHHHHH
T ss_pred             cCCCCCCcccCCCcCcccccCCCCCCCHHHHHHHHHHHHhcCcEEEEEeccccccCCCcccccCCCcCccccccCccccc
Confidence               5899999999999999887778999999999999999999999999999999852 222111  11221        


Q ss_pred             ---ccC-----CCCCCcccccCCCCHHHHHHHHHHHHHHHHhcCccEEEEccCcccccccccccCC--------------
Q 047308          500 ---AHR-----GEGIETTNVLNCNYPTVQQMILNSLRHWVTEFHIDGFCFINASSLLRGFHGEYLS--------------  557 (878)
Q Consensus       500 ---~~~-----~~~~~~~~dln~~~p~Vr~~iid~l~~Wl~e~gVDGFRfD~a~~l~~~~~~~~~~--------------  557 (878)
                         ...     ..+...+++||+.||+||++++++++||++++||||||+|+++++...++.....              
T Consensus       163 ~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
T d1bf2a3         163 YYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFD  242 (475)
T ss_dssp             HBCBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBCCSSSSCCTTSTTCTTCSCCBC
T ss_pred             ccccCCCccccccCCCccCccchhhhHHHHHHHHHHHhhhhhcCCceEEEehHhhhchhhhccchhccCccCcccccchh
Confidence               111     1234567999999999999999999999999999999999999997765432110              


Q ss_pred             ----chh---HHHHHHcC--ccccccEEEeecCCCCCCCCCCCCCCcccchhhhhhHHHHHHHHHHhcC----CcHHHHH
Q 047308          558 ----RPP---LIEAIAFD--PLLSKAKLIADYWDPHGVAPKDTRFPHWKRWAELNTNFCNDVRNFFRGE----GLLSDLA  624 (878)
Q Consensus       558 ----~~~---~~~~ia~d--~~~~~~~ligE~w~~~~~~~~~~~~~~~~~~~~~n~~f~d~ir~~l~g~----~~~~~~~  624 (878)
                          ...   ....+..+  .......+++|.|...........++  ..+..++..+.+.++.+....    ......+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (475)
T d1bf2a3         243 AADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFP--QGWSEWNGLFRDSLRQAQNELGSMTIYVTQDA  320 (475)
T ss_dssp             TTCTTSHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTCCCTTCSC--TTCEEECHHHHHHHHHHHHCBTTBCCCHHHHH
T ss_pred             hhhhhhhhhhhhhhhhhhhhcccccccccccccccccccccccCCc--cchHHhcchhHHHHHHHhcccccchhhHhhhh
Confidence                011   11111111  22345678899987554433333333  245677888999998887653    3445566


Q ss_pred             HHHcCCCcccC-CCCCCceeeeeeccCCCCCccccccccCCC-------------CCCcccccCCCCCCCCchHHHHHHH
Q 047308          625 TRLCGSGDIFS-DGRGPAFSFNYIARNTGLPLVDLVSFSGGG-------------LASELSWNCGEEGPTTKTAVLERRL  690 (878)
Q Consensus       625 ~~l~~s~~~f~-~~~~~~~~inyi~~HD~~tL~D~v~~~~~~-------------~~~~~swn~g~~G~t~~~~~~~~r~  690 (878)
                      ..+.+..+.|. .++.+...+||+++||++++.|++.+....             ...+.+|+.+....+.   ....+.
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~hd~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  397 (475)
T d1bf2a3         321 NDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYGPSDGGTSTNYSWDQGMSAGTG---AAVDQR  397 (475)
T ss_dssp             HHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHTTCSSCCCCCCTTSCCCCCCCSCCCCCCTTTTTTSC---CHHHHH
T ss_pred             hhcccchhhhhccCcCHHHHHhHHHhcchhhHHHHhhhhhhhhHhhccccccCCCcccccccccCccCCcc---hhHHHH
Confidence            66666555443 235677889999999999999887654411             1223445555544332   234556


Q ss_pred             HHHHHHHHHHHhcCCceeEecchhccccCCCC-CCCCC---CCCCCccccccCCCccHHHHHHHHHHHHhhc
Q 047308          691 KQIRNFLFVLYVSLGVPILNMGDECGQSSWGS-PSYAD---RKPFDWNALATGFGIQITEFISFLSSFRLKR  758 (878)
Q Consensus       691 ~~~rla~allltspGiP~Iy~GdE~G~~~~g~-n~y~~---r~~~~W~~~~~~~~~~l~~f~k~Li~LRk~~  758 (878)
                      +++|++++++||+||+||||||||+|+++.++ |+|+.   .++++|+..+.  ++++++|+|+||+|||++
T Consensus       398 ~~~r~~~~~llt~pGiP~iyyGdE~g~~~~g~~~~y~~~~~~~~~~~~~~~~--~~~l~~~~~~Li~lR~~~  467 (475)
T d1bf2a3         398 RAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTYSWTTD--QSNFYTFAQRLIAFRKAH  467 (475)
T ss_dssp             HHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSCCTTCCSTTTSCCCCCCHH--HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhccchheecCHhhCccCCCCcccccCCCccCccCCCccch--hHHHHHHHHHHHHHHhcC
Confidence            78999999999999999999999999998876 57754   34567765443  368999999999999998
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} Back     information, alignment and structure
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2fhfa4 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure