Citrus Sinensis ID: 047330


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-
MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLILKKGVDCIRKKPIVMDDDDG
cccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccEEEcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHccccccHHHHHHHHcccccccccccccccc
cHHHccccHcHccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEccccccccEccccccccccccccccHHHHHHHHHHHHHHccccEEEccHHHHHcccEHHHHHHHHHccccHHHHHHHHHHHcccccHHHcccHHHccccccHHHHHHHHHcccccHHEEHccccccccHHHHHHccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccHHHcccccEEEccccccccHHHHHHHHHHHHHHHHHHccccccHHHccccEEcccccccccccccccccccccEEEEEcccHHHHHHHHHccccccccccccccccccccccEccccccHHccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHccccccHccccccccccHHHHHHHHcccccccEEEEcccccccccccccccEEEEcccccccccEcEEEcccccccEEEEcccccccccccccccHHHHHHHccHHHcccccEcccccc
maadyafteddmavdeglgypkAYAKICrdrsasgvglcshgppfcftpyplqedesSRAKQLEkmfpvidpkakptakpkIFLSLLWKQLNHlgnagfdpavirvdpygnvlyyhadsasplaweidhwfpcsrggltvpsnlrILQWQVCkrkhnkpefvvpwwdlqlgisVNQFLSVFassnsdfrHRAFSYLFlegeneeinasqtveshsfpqhfveskrklglapagivVSRRELRDSALTLRSLdynrqirssspaiasrkvkpgvlkenetpdfvtnpYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMrrandeeklDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEReharkrsrmddtlfeekdsrsvlylpgvkqrtpiHKELRVFLEEEQKASeaglssneerrneeveeeppklgiNFAKEKHEERDKsivafeeypieDQLKRLEIGEEkrqrlqfpvlrepeiqkVEEEEEEIRKERGKGNVERWLQMLLENtqeetdpqatnenktsrtDDIIKKLdekypqkdrssvtqepekQQIVVEKEARKLEEEiteiepaetvteksnVVEQISIVegvgsrksfeVRERTEkhgkekslgrsesarafhripsspslilkkgvdcirkkpivmddddg
maadyafteddmavdeGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPvidpkakptAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVEskrklglapagivvsrrelrdsaltlrsldynrqirssspaiasrkvkpgvlkenetpdfvtnpyQAIVAARDSLKQREETQKMQMEIQKLNEEVTdmrrandeekldiqDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDlhkkfkqreeiekqlrpereharkrsrmddtlfeekdsrsvlylpgvkqrtpiHKELRVFLEEeqkaseaglssneerrneeveeeppklginfakekheerdksivafeeypiedqLKRLEIgeekrqrlqfpvlrepeiqkveeeeeeirkergkgnveRWLQMLLEntqeetdpqatnenktsrtddiiKKLDekypqkdrssvtqepekqqivvEKEARKLEeeiteiepaetvteksnvveqisivegvgsrksfevrertekhgkekslgrsesarafhripsspslilkkgvdcirkkpivmddddg
MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSneerrneeveeePPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLrepeiqkveeeeeeirkerGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIvvekearkleeeiteiepaetvteKSNVVEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLILKKGVDCIRKKPIVMDDDDG
***********MAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYP***************************KPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEG*************************KLGLAPAGIVVSRREL****LTL**********************************V**PYQAIV********************************************************************TMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAIC**********************************************VLYLPGVK****IHKELRVF**********************************************VAFEEY************************************************************************************************************************************************************************************LILKKGVDCIR***********
********EDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDP*********IFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEG**********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************V******
MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQL*************DDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEE***********************PKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQK************GKGNVERWLQMLLENTQ***************TDDIIKKLDEK****************QIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISIVEGVGSR*************************AFHRIPSSPSLILKKGVDCIRKKPIVMDDDDG
****YAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGL******************************DKSIVAFEEYPIEDQLKRLEIG***RQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENT*******************II****EK*P***********EKQ******EARKLEEEITEIEPAETVTE****VEQISIV*GVGSRKSFEVRERTEKHGKEKSLGRS*S*RAFHRIPSSPSLILKKGVDCIRKKPIVM*****
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MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAIxxxxxxxxxxxxxxxxxxxxxLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLILKKGVDCIRKKPIVMDDDDG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query721
359482658746 PREDICTED: uncharacterized protein LOC10 0.973 0.941 0.661 0.0
449460568711 PREDICTED: uncharacterized protein LOC10 0.941 0.954 0.611 0.0
356557263718 PREDICTED: uncharacterized protein LOC10 0.950 0.954 0.632 0.0
356547420740 PREDICTED: uncharacterized protein LOC10 0.966 0.941 0.632 0.0
357455079707 hypothetical protein MTR_2g102680 [Medic 0.951 0.970 0.604 0.0
297743366657 unnamed protein product [Vitis vinifera] 0.747 0.820 0.736 0.0
240255352729 uncharacterized protein [Arabidopsis tha 0.958 0.947 0.562 0.0
297830140727 predicted protein [Arabidopsis lyrata su 0.954 0.946 0.573 0.0
242051879819 hypothetical protein SORBIDRAFT_03g00411 0.750 0.660 0.539 1e-166
357127491815 PREDICTED: uncharacterized protein LOC10 0.690 0.611 0.564 1e-159
>gi|359482658|ref|XP_002285224.2| PREDICTED: uncharacterized protein LOC100251511 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  886 bits (2290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/739 (66%), Positives = 579/739 (78%), Gaps = 37/739 (5%)

Query: 1   MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
           MA D AF+E+++A+DEGLGYPKAYAK+C +R   G+G  SHGPPF FTPY LQ+ E+ RA
Sbjct: 1   MAMDIAFSEEEVAIDEGLGYPKAYAKLCWNR---GLGPYSHGPPFTFTPYILQQHEALRA 57

Query: 61  KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
           ++L++MFP+IDPKAKPT KPKIF+SLLWKQLNHLGNAGFDPA+ RVDPYGNVLYYHADSA
Sbjct: 58  RELDQMFPIIDPKAKPTTKPKIFISLLWKQLNHLGNAGFDPAIFRVDPYGNVLYYHADSA 117

Query: 121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
           SPLAW+IDHWFPCSRGGLTVPSNLRILQWQVC+RKHNK EF+VPWWDLQLGIS+NQFLS+
Sbjct: 118 SPLAWDIDHWFPCSRGGLTVPSNLRILQWQVCRRKHNKLEFLVPWWDLQLGISINQFLSI 177

Query: 181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
           FASSNSDFRHRAFS LF EGENEE+N S TVESH+FP HF+ESK ++GLAPA +V+SRRE
Sbjct: 178 FASSNSDFRHRAFSLLFFEGENEELNDSHTVESHTFPHHFIESKEQVGLAPAAVVLSRRE 237

Query: 241 LRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQR 300
            RD +  L+SLD+NRQ        A+RK+K  V KENE PD VTNPYQAIV ARDSLKQR
Sbjct: 238 SRDPSPALKSLDFNRQ-------TAARKMKHSVSKENENPDMVTNPYQAIVMARDSLKQR 290

Query: 301 EETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRT 360
           EE  KMQ EIQKL++EV D+++ N+EEK+ IQDLE +LIKRRRRAEKCR+LAEAQSSYR 
Sbjct: 291 EEAAKMQGEIQKLDDEVNDLKQKNEEEKVLIQDLEYQLIKRRRRAEKCRRLAEAQSSYRI 350

Query: 361 MLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEK 420
           MLEKMIRDAMHQSVIYKEQVRLNQ ATNALMARLEAQKAICD++EK+LHKKFKQR+EIE 
Sbjct: 351 MLEKMIRDAMHQSVIYKEQVRLNQAATNALMARLEAQKAICDASEKELHKKFKQRDEIEY 410

Query: 421 QLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPI-HKELRVFLEEEQKASEAGL 479
           Q+RPE E  RKRSRMDD L E+ D+++VL LPG+K  + + HKELRVFLEEEQKASEA L
Sbjct: 411 QIRPEWEQGRKRSRMDDNLHEDGDNKTVLCLPGIKPSSALSHKELRVFLEEEQKASEAAL 470

Query: 480 SSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFE-EYPIEDQLKRLEIGEEKRQRL 538
           S  EER+ EE+EEE P   +N ++EK EE   SIVA E E  IE++L+ LEIGE K    
Sbjct: 471 SLIEERKQEEIEEE-PAENVN-SREKPEETRLSIVAVEDENTIEERLQALEIGEGKNYNT 528

Query: 539 QFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEET-DPQATNENKTSRTDD 597
           QFPVLR    +   EE+EE RK+RGKGNVE+WLQMLLENTQEE        E++TSRTD+
Sbjct: 529 QFPVLR----EPEIEEDEECRKQRGKGNVEKWLQMLLENTQEEGFGSNNAQEHETSRTDE 584

Query: 598 IIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEP-AETVTEK-------- 648
           +I++L+ KYP         E ++Q+I   K+  K +E I E +  + TV+E         
Sbjct: 585 VIRQLNLKYPYNQTKFPESENKQQKIRGRKDQWKGKEPIVEKDGNSNTVSENLPNLLPSD 644

Query: 649 ----SNVVEQISIVEGVGSRKSFEVRER-TEKHGKEKSLGRSESARAFHRIPSSPSLIL- 702
                 VV   SI +GVGS  SFE +ER  E+  K++ L RSESAR F   PSSPS+IL 
Sbjct: 645 KSYADGVVG--SIGKGVGSSMSFEGKERKGERSRKDRGLVRSESARTFRPTPSSPSVILT 702

Query: 703 -KKGVDCIRKKPIVMDDDD 720
            KKGVDCI KKP+V  DD+
Sbjct: 703 MKKGVDCIGKKPMVTGDDE 721




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460568|ref|XP_004148017.1| PREDICTED: uncharacterized protein LOC101221010 [Cucumis sativus] gi|449520032|ref|XP_004167038.1| PREDICTED: uncharacterized LOC101221010 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356557263|ref|XP_003546937.1| PREDICTED: uncharacterized protein LOC100776970 [Glycine max] Back     alignment and taxonomy information
>gi|356547420|ref|XP_003542110.1| PREDICTED: uncharacterized protein LOC100797659 [Glycine max] Back     alignment and taxonomy information
>gi|357455079|ref|XP_003597820.1| hypothetical protein MTR_2g102680 [Medicago truncatula] gi|355486868|gb|AES68071.1| hypothetical protein MTR_2g102680 [Medicago truncatula] Back     alignment and taxonomy information
>gi|297743366|emb|CBI36233.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|240255352|ref|NP_188174.4| uncharacterized protein [Arabidopsis thaliana] gi|11994223|dbj|BAB01345.1| unnamed protein product [Arabidopsis thaliana] gi|332642171|gb|AEE75692.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297830140|ref|XP_002882952.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328792|gb|EFH59211.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|242051879|ref|XP_002455085.1| hypothetical protein SORBIDRAFT_03g004110 [Sorghum bicolor] gi|241927060|gb|EES00205.1| hypothetical protein SORBIDRAFT_03g004110 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|357127491|ref|XP_003565413.1| PREDICTED: uncharacterized protein LOC100821388 [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query721
TAIR|locus:2090151729 AT3G15550 "AT3G15550" [Arabido 0.962 0.951 0.548 3.5e-201
DICTYBASE|DDB_G0271058 1528 vilC "villin-like protein C" [ 0.482 0.227 0.225 1.3e-06
ZFIN|ZDB-GENE-030616-583 1376 acin1a "apoptotic chromatin co 0.244 0.127 0.262 1.6e-06
FB|FBgn00205031690 CLIP-190 "Cytoplasmic linker p 0.363 0.155 0.230 2.3e-05
UNIPROTKB|F1NGZ3 2417 F1NGZ3 "Uncharacterized protei 0.201 0.059 0.261 2.7e-05
ZFIN|ZDB-GENE-050208-317 1422 tnks1bp1 "tankyrase 1 binding 0.373 0.189 0.230 6e-05
DICTYBASE|DDB_G0275731 1385 DDB_G0275731 "Ras GTPase activ 0.255 0.132 0.260 8.1e-05
DICTYBASE|DDB_G0276103 1503 enlA "enlazin" [Dictyostelium 0.313 0.150 0.233 0.00011
ZFIN|ZDB-GENE-030131-5726 1267 eif3s10 "eukaryotic translatio 0.364 0.207 0.229 0.00012
UNIPROTKB|F1RZG8497 MNS1 "Uncharacterized protein" 0.314 0.456 0.260 0.00012
TAIR|locus:2090151 AT3G15550 "AT3G15550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1947 (690.4 bits), Expect = 3.5e-201, P = 3.5e-201
 Identities = 401/731 (54%), Positives = 499/731 (68%)

Query:     1 MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
             M  DY  TE+D+ ++E  GYP+AY KICRD  A       +GPPF F PY LQ++ES R 
Sbjct:     1 MMGDYGITEEDLVIEEAQGYPRAYTKICRDFDAFPY---KNGPPFTFMPYILQQNESLRC 57

Query:    61 KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
             +++++MFPVIDPKA+PT KPKIFLSLLWKQLNHLGNAGFDPAVIR+DPYGNV+Y+HADSA
Sbjct:    58 REVDQMFPVIDPKARPTTKPKIFLSLLWKQLNHLGNAGFDPAVIRIDPYGNVVYFHADSA 117

Query:   121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
             SPLAW  DHWFPCSRGGLTVPSNLRI+QWQ  K K +K EF+VPWWDLQ+GISVNQFLS+
Sbjct:   118 SPLAWSFDHWFPCSRGGLTVPSNLRIVQWQARKNKKDKLEFLVPWWDLQVGISVNQFLSI 177

Query:   181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
             FA+S+SDFR RAFS+LF EGENEE+N  Q VESH FPQHFVESK K GLA A +V SRR+
Sbjct:   178 FAASSSDFRRRAFSFLFKEGENEELNGIQMVESHHFPQHFVESKDKFGLASAAVVFSRRD 237

Query:   241 LRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQR 300
               D +L LRSLDYNRQ    +PA   RK++ G  KENETPD + NPYQAIVAARDSL+ R
Sbjct:   238 PYDPSLVLRSLDYNRQ----TPA---RKMRFGATKENETPDLMKNPYQAIVAARDSLRHR 290

Query:   301 EETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRT 360
             EE Q M+ E++KL++E  D+ R N+E++L IQ+LE EL+KRRRRAEKCR+LAE+Q SYR 
Sbjct:   291 EEAQNMRAEMKKLDDETNDLTRKNNEDRLTIQELENELVKRRRRAEKCRRLAESQCSYRN 350

Query:   361 MLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEK 420
              LEKMIRDAMHQSV+YKEQVRLNQ A++ALMARLEAQKAICD +EK+LHKKFK+REE+E 
Sbjct:   351 TLEKMIRDAMHQSVVYKEQVRLNQAASSALMARLEAQKAICDGSEKELHKKFKEREELEN 410

Query:   421 QLRPEREHARKRSRM-----DDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKA- 474
              ++PE E ARKRSR+     DD L +++D    LYLPG  + T  HKELRV  EEE KA 
Sbjct:   411 LVKPELEKARKRSRLLLNDEDDLLLDDRDRNLSLYLPGTSEETSSHKELRVHFEEEHKAA 470

Query:   475 -SEAGLSSXXXXXXXXXXXXPPKLGINFAKEKHEERDKSIVAFEE-YPIEDQLKRLEIGE 532
              SEA +               P++            +KS+VA E+  P+E+   + ++ E
Sbjct:   471 ASEAEIKKHCEIEEEEEEQKTPEVS-----------EKSLVALEDDKPVEE---KPDVEE 516

Query:   533 EKRQRLQFPVLXXXXXXXXXXXXXXXXXXXGKGNVERWLQMLLENTQEETDPQATNENKT 592
              KR    F                      GKGNVE+WL +LLEN  + +DP      K+
Sbjct:   517 GKRSNRSFRAFHVFKAPENEEDEESRRER-GKGNVEKWLHILLENNSK-SDPHDLQTEKS 574

Query:   593 SRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIXXXXXXXXXXXXXXXXXXXXXXXXKSNVV 652
              + D++I+KLD K+P  ++    +   K Q                          +N  
Sbjct:   575 KKIDEMIEKLDHKFPFLEKVDEEEVDLKLQAKEANNNTSKVDEEEVDLQLQAKETNNNTS 634

Query:   653 E-QISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLI--LKKGVDCI 709
             + +I       SR SF+++   EK G++K + RSESAR F RIPSSPSLI  +KKG+DCI
Sbjct:   635 KVEIRTESSRRSRMSFDLKNTPEKSGRDKVVKRSESARTFTRIPSSPSLIFGMKKGIDCI 694

Query:   710 RKKPIVMDDDD 720
             RKKP+V  +DD
Sbjct:   695 RKKPVVSGNDD 705




GO:0003674 "molecular_function" evidence=ND
GO:0005737 "cytoplasm" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0000226 "microtubule cytoskeleton organization" evidence=RCA
GO:0000724 "double-strand break repair via homologous recombination" evidence=RCA
GO:0000911 "cytokinesis by cell plate formation" evidence=RCA
GO:0006306 "DNA methylation" evidence=RCA
GO:0006342 "chromatin silencing" evidence=RCA
GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA
GO:0031047 "gene silencing by RNA" evidence=RCA
GO:0031048 "chromatin silencing by small RNA" evidence=RCA
GO:0031507 "heterochromatin assembly" evidence=RCA
GO:0045787 "positive regulation of cell cycle" evidence=RCA
GO:0048451 "petal formation" evidence=RCA
GO:0048453 "sepal formation" evidence=RCA
GO:0051567 "histone H3-K9 methylation" evidence=RCA
DICTYBASE|DDB_G0271058 vilC "villin-like protein C" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030616-583 acin1a "apoptotic chromatin condensation inducer 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0020503 CLIP-190 "Cytoplasmic linker protein 190" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1NGZ3 F1NGZ3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050208-317 tnks1bp1 "tankyrase 1 binding protein 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0275731 DDB_G0275731 "Ras GTPase activation domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0276103 enlA "enlazin" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5726 eif3s10 "eukaryotic translation initiation factor 3, subunit 10 (theta)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RZG8 MNS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query721
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 6e-05
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 2e-04
TIGR021691164 TIGR02169, SMC_prok_A, chromosome segregation prot 7e-04
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 0.001
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 0.001
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 0.002
COG11961163 COG1196, Smc, Chromosome segregation ATPases [Cell 0.002
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 0.002
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 0.002
TIGR02169 1164 TIGR02169, SMC_prok_A, chromosome segregation prot 0.004
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
 Score = 46.3 bits (109), Expect = 6e-05
 Identities = 66/390 (16%), Positives = 154/390 (39%), Gaps = 9/390 (2%)

Query: 295  DSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRR-----RRAEKCR 349
            D+ K++ E  K   E  K   E         EEK +  + + E  K++     ++AE+ +
Sbjct: 1332 DAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391

Query: 350  QLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLH 409
            +  EA+       +K   D + ++   K++    +          EA+K   ++ + D  
Sbjct: 1392 KADEAKKKAEEDKKKA--DELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449

Query: 410  KKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLE 469
            KK  +  +  ++ + + E A+K         E K +         ++      E +   E
Sbjct: 1450 KKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAK--KKAEEAKKKADEAKKAAE 1507

Query: 470  EEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLE 529
             ++KA EA  +   ++ +E  + E  K      K + +++   +   EE    ++ K+ E
Sbjct: 1508 AKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAE 1567

Query: 530  IGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNE 589
              ++  +     + +  E +K EE   E   +  +   +   +   +  + +   +   +
Sbjct: 1568 EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK 1627

Query: 590  NKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKS 649
             +  +      K  E   +K    + +  E+ +I   +EA+K EE+  + E A+   E  
Sbjct: 1628 AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687

Query: 650  NVVEQISIVEGVGSRKSFEVRERTEKHGKE 679
                +    E   ++K+ E++++  +  K+
Sbjct: 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717


Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 721
PF1339554 HNH_4: HNH endonuclease 98.18
PF0184447 HNH: HNH endonuclease; InterPro: IPR002711 HNH end 97.98
cd0008557 HNHc HNH nucleases; HNH endonuclease signature whi 97.64
TIGR01865805 cas_Csn1 CRISPR-associated protein, Csn1 family. C 96.73
COG1403146 McrA Restriction endonuclease [Defense mechanisms] 96.54
smart0050752 HNHc HNH nucleases. 96.41
PRK11295113 hypothetical protein; Provisional 90.14
TIGR02646144 conserved hypothetical protein TIGR02646. Members 82.98
>PF13395 HNH_4: HNH endonuclease Back     alignment and domain information
Probab=98.18  E-value=7.1e-07  Score=70.66  Aligned_cols=38  Identities=39%  Similarity=0.471  Sum_probs=36.2

Q ss_pred             eeecceeeecCCCCcccccchhhhhHhhhcccCCCCcc
Q 047330          124 AWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEF  161 (721)
Q Consensus       124 gWEIDHIfP~SRGG~Tv~sNLQiLQWqvNr~KsNKle~  161 (721)
                      -++||||+|+|+||.....||.+.+-.+|+.|+||+.|
T Consensus        17 ~~~iDHiiP~s~~~~~s~~Nlvl~~~~~N~~K~~k~P~   54 (54)
T PF13395_consen   17 KYEIDHIIPRSRGGDDSFWNLVLCCKECNRSKGNKTPF   54 (54)
T ss_pred             CceeEEEecccccCCCCcchhheECHHHhhcccccCCC
Confidence            48999999999999999999999999999999999875



>PF01844 HNH: HNH endonuclease; InterPro: IPR002711 HNH endonuclease is found in bacteria and viruses [, , ] Back     alignment and domain information
>cd00085 HNHc HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins Back     alignment and domain information
>TIGR01865 cas_Csn1 CRISPR-associated protein, Csn1 family Back     alignment and domain information
>COG1403 McrA Restriction endonuclease [Defense mechanisms] Back     alignment and domain information
>smart00507 HNHc HNH nucleases Back     alignment and domain information
>PRK11295 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02646 conserved hypothetical protein TIGR02646 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query721
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-08
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 4e-08
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 7e-08
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-06
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 6e-06
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 57.9 bits (139), Expect = 1e-08
 Identities = 86/672 (12%), Positives = 181/672 (26%), Gaps = 220/672 (32%)

Query: 5   YAFTEDDMAVDEGLGYP---KAYAKICRDRSASGVG-------LCSHGPPFCFTPYPLQE 54
             F E+ + ++    Y           R  S            L +      F  Y +  
Sbjct: 80  QKFVEEVLRIN----YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV--FAKYNV-- 131

Query: 55  DESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLY 114
              SR +   K+      +A    +P   + +        G  G                
Sbjct: 132 ---SRLQPYLKL-----RQALLELRPAKNVLI------D-GVLGS--------------- 161

Query: 115 YHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCK--RKHNKPEFVVPWWDLQLG- 171
                                 G T       +   VC   +   K +F + W  L L  
Sbjct: 162 ----------------------GKTW------VALDVCLSYKVQCKMDFKIFW--LNLKN 191

Query: 172 -------ISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESK 224
                  + + Q L      N   R    S + L   + +    + ++S  +        
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE------- 244

Query: 225 RKLGLAPAGIVVSRRELRD--SALTLRSLDYNRQI----RSSSPAIASRKVKPGVLKENE 278
             L      +V     L +  +A    + + + +I    R                    
Sbjct: 245 NCL------LV-----LLNVQNAKAWNAFNLSCKILLTTRFKQVT--------------- 278

Query: 279 TPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELEL 338
             DF++      ++           +   + ++ L+    D+ R    E L      L +
Sbjct: 279 --DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR----EVLTTNPRRLSI 332

Query: 339 IKRRRRAEKCR----------QLAEA-QSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVAT 387
           I    R               +L    +SS   +     R    +  ++     +     
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI----P 388

Query: 388 NALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRS 447
             L++ +       D  + D+         +  +L        K S     L E++   S
Sbjct: 389 TILLSLI-----WFDVIKSDV-------MVVVNKL-------HKYS-----LVEKQPKES 424

Query: 448 VLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPK---------LG 498
            + +P       I+ EL+V LE E     + +      +  + ++  P          +G
Sbjct: 425 TISIPS------IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478

Query: 499 INFAKEKHEERDKSIVAFEEYP--------IEDQLKRLEIGEEKRQRLQFPVLREPEIQK 550
            +    +H ER         +         +E +++           +         +Q+
Sbjct: 479 HHLKNIEHPER------MTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL------NTLQQ 526

Query: 551 VEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDIIK-KLDEKYPQK 609
           ++  +  I         ER +  +L+       P+       S+  D+++  L       
Sbjct: 527 LKFYKPYICDN--DPKYERLVNAILDFL-----PKIEENLICSKYTDLLRIAL-----MA 574

Query: 610 DRSSVTQEPEKQ 621
           +  ++ +E  KQ
Sbjct: 575 EDEAIFEEAHKQ 586


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query721
2qgp_A112 HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, stru 97.94
3na7_A256 HP0958; flagellar biogenesis, flagellum export, C4 83.91
3oja_B597 Anopheles plasmodium-responsive leucine-rich REPE 82.67
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00