Citrus Sinensis ID: 047330

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-
Protein Sequence
MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLILKKGVDCIRKKPIVMDDDDG
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccEEEcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHccccccHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHccccHcHccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEccccccccEccccccccccccccccHHHHHHHHHHHHHHccccEEEccHHHHHcccEHHHHHHHHHccccHHHHHHHHHHHcccccHHHcccHHHccccccHHHHHHHHHcccccHHEEHccccccccHHHHHHccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccHHHcccccEEEccccccccHHHHHHHHHHHHHHHHHHccccccHHHccccEEcccccccccccccccccccccEEEEEcccHHHHHHHHHccccccccccccccccccccccEccccccHHccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHccccccHccccccccccHHHHHHHHcccccccEEEEcccccccccccccccEEEEcccccccccEcEEEcccccccEEEEcccccccccccccccHHHHHHHccHHHcccccEcccccc
Coil and Loop (DISEMBL)
maadyafteddmavdeglgypkAYAKICrdrsasgvglcshgppfcftpyplqedesSRAKQLEkmfpvidpkakptakpkIFLSLLWKQLNHlgnagfdpavirvdpygnvlyyhadsasplaweidhwfpcsrggltvpsnlrILQWQVCkrkhnkpefvvpwwdlqlgisVNQFLSVFassnsdfrHRAFSYLFlegeneeinasqtveshsfpqhfveskrklglapagivVSRRELRDSALTLRSLdynrqirssspaiasrkvkpgvlkenetpdfvtnpYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMrrandeeklDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEReharkrsrmddtlfeekdsrsvlylpgvkqrtpiHKELRVFLEEEQKASeaglssneerrneeveeeppklgiNFAKEKHEERDKsivafeeypieDQLKRLEIGEEkrqrlqfpvlrepeiqkVEEEEEEIRKERGKGNVERWLQMLLENtqeetdpqatnenktsrtDDIIKKLdekypqkdrssvtqepekQQIVVEKEARKLEEEiteiepaetvteksnVVEQISIVegvgsrksfeVRERTEkhgkekslgrsesarafhripsspslilkkgvdcirkkpivmddddg
Flexible Loop (DISEMBL)
maadyafteddmavdeGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPvidpkakptAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVEskrklglapagivvsrrelrdsaltlrsldynrqirssspaiasrkvkpgvlkenetpdfvtnpyQAIVAARDSLKQREETQKMQMEIQKLNEEVTdmrrandeekldiqDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDlhkkfkqreeiekqlrpereharkrsrmddtlfeekdsrsvlylpgvkqrtpiHKELRVFLEEeqkaseaglssneerrneeveeeppklginfakekheerdksivafeeypiedqLKRLEIgeekrqrlqfpvlrepeiqkveeeeeeirkergkgnveRWLQMLLEntqeetdpqatnenktsrtddiiKKLDekypqkdrssvtqepekqqivvEKEARKLEeeiteiepaetvteksnvveqisivegvgsrksfevrertekhgkekslgrsesarafhripsspslilkkgvdcirkkpivmddddg
Low Complexity Region (SEG)
MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSneerrneeveeePPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLrepeiqkveeeeeeirkerGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIvvekearkleeeiteiepaetvteKSNVVEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLILKKGVDCIRKKPIVMDDDDG
Disordered region (IsUnstruct)
***********MAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYP***************************KPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEG*************************KLGLAPAGIVVSRREL****LTL**********************************V**PYQAIV********************************************************************TMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAIC**********************************************VLYLPGVK****IHKELRVF**********************************************VAFEEY************************************************************************************************************************************************************************************LILKKGVDCIR***********
Disordered Region (DISOPRED)
********EDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDP*********IFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEG**********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************V******
Disordered Region (DISEMBL)
MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQL*************DDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEE***********************PKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQK************GKGNVERWLQMLLENTQ***************TDDIIKKLDEK****************QIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISIVEGVGSR*************************AFHRIPSSPSLILKKGVDCIRKKPIVMDDDDG
Disordered Region (DISPRO)
****YAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGL******************************DKSIVAFEEYPIEDQLKRLEIG***RQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENT*******************II****EK*P***********EKQ******EARKLEEEITEIEPAETVTE****VEQISIV*GVGSRKSFEVRERTEKHGKEKSLGRS*S*RAFHRIPSSPSLILKKGVDCIRKKPIVM*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAIxxxxxxxxxxxxxxxxxxxxxLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLILKKGVDCIRKKPIVMDDDDG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	721
359482658	746	PREDICTED: uncharacterized protein LOC10	0.973	0.941	0.661	0.0
449460568	711	PREDICTED: uncharacterized protein LOC10	0.941	0.954	0.611	0.0
356557263	718	PREDICTED: uncharacterized protein LOC10	0.950	0.954	0.632	0.0
356547420	740	PREDICTED: uncharacterized protein LOC10	0.966	0.941	0.632	0.0
357455079	707	hypothetical protein MTR_2g102680 [Medic	0.951	0.970	0.604	0.0
297743366	657	unnamed protein product [Vitis vinifera]	0.747	0.820	0.736	0.0
240255352	729	uncharacterized protein [Arabidopsis tha	0.958	0.947	0.562	0.0
297830140	727	predicted protein [Arabidopsis lyrata su	0.954	0.946	0.573	0.0
242051879	819	hypothetical protein SORBIDRAFT_03g00411	0.750	0.660	0.539	1e-166
357127491	815	PREDICTED: uncharacterized protein LOC10	0.690	0.611	0.564	1e-159

>gi|359482658|ref|XP_002285224.2| PREDICTED: uncharacterized protein LOC100251511 [Vitis vinifera]

 Score =  886 bits (2290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/739 (66%), Positives = 579/739 (78%), Gaps = 37/739 (5%)

Query: 1   MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
           MA D AF+E+++A+DEGLGYPKAYAK+C +R   G+G  SHGPPF FTPY LQ+ E+ RA
Sbjct: 1   MAMDIAFSEEEVAIDEGLGYPKAYAKLCWNR---GLGPYSHGPPFTFTPYILQQHEALRA 57

Query: 61  KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
           ++L++MFP+IDPKAKPT KPKIF+SLLWKQLNHLGNAGFDPA+ RVDPYGNVLYYHADSA
Sbjct: 58  RELDQMFPIIDPKAKPTTKPKIFISLLWKQLNHLGNAGFDPAIFRVDPYGNVLYYHADSA 117

Query: 121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
           SPLAW+IDHWFPCSRGGLTVPSNLRILQWQVC+RKHNK EF+VPWWDLQLGIS+NQFLS+
Sbjct: 118 SPLAWDIDHWFPCSRGGLTVPSNLRILQWQVCRRKHNKLEFLVPWWDLQLGISINQFLSI 177

Query: 181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
           FASSNSDFRHRAFS LF EGENEE+N S TVESH+FP HF+ESK ++GLAPA +V+SRRE
Sbjct: 178 FASSNSDFRHRAFSLLFFEGENEELNDSHTVESHTFPHHFIESKEQVGLAPAAVVLSRRE 237

Query: 241 LRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQR 300
            RD +  L+SLD+NRQ        A+RK+K  V KENE PD VTNPYQAIV ARDSLKQR
Sbjct: 238 SRDPSPALKSLDFNRQ-------TAARKMKHSVSKENENPDMVTNPYQAIVMARDSLKQR 290

Query: 301 EETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRT 360
           EE  KMQ EIQKL++EV D+++ N+EEK+ IQDLE +LIKRRRRAEKCR+LAEAQSSYR 
Sbjct: 291 EEAAKMQGEIQKLDDEVNDLKQKNEEEKVLIQDLEYQLIKRRRRAEKCRRLAEAQSSYRI 350

Query: 361 MLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEK 420
           MLEKMIRDAMHQSVIYKEQVRLNQ ATNALMARLEAQKAICD++EK+LHKKFKQR+EIE 
Sbjct: 351 MLEKMIRDAMHQSVIYKEQVRLNQAATNALMARLEAQKAICDASEKELHKKFKQRDEIEY 410

Query: 421 QLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPI-HKELRVFLEEEQKASEAGL 479
           Q+RPE E  RKRSRMDD L E+ D+++VL LPG+K  + + HKELRVFLEEEQKASEA L
Sbjct: 411 QIRPEWEQGRKRSRMDDNLHEDGDNKTVLCLPGIKPSSALSHKELRVFLEEEQKASEAAL 470

Query: 480 SSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFE-EYPIEDQLKRLEIGEEKRQRL 538
           S  EER+ EE+EEE P   +N ++EK EE   SIVA E E  IE++L+ LEIGE K    
Sbjct: 471 SLIEERKQEEIEEE-PAENVN-SREKPEETRLSIVAVEDENTIEERLQALEIGEGKNYNT 528

Query: 539 QFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEET-DPQATNENKTSRTDD 597
           QFPVLR    +   EE+EE RK+RGKGNVE+WLQMLLENTQEE        E++TSRTD+
Sbjct: 529 QFPVLR----EPEIEEDEECRKQRGKGNVEKWLQMLLENTQEEGFGSNNAQEHETSRTDE 584

Query: 598 IIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEP-AETVTEK-------- 648
           +I++L+ KYP         E ++Q+I   K+  K +E I E +  + TV+E         
Sbjct: 585 VIRQLNLKYPYNQTKFPESENKQQKIRGRKDQWKGKEPIVEKDGNSNTVSENLPNLLPSD 644

Query: 649 ----SNVVEQISIVEGVGSRKSFEVRER-TEKHGKEKSLGRSESARAFHRIPSSPSLIL- 702
                 VV   SI +GVGS  SFE +ER  E+  K++ L RSESAR F   PSSPS+IL 
Sbjct: 645 KSYADGVVG--SIGKGVGSSMSFEGKERKGERSRKDRGLVRSESARTFRPTPSSPSVILT 702

Query: 703 -KKGVDCIRKKPIVMDDDD 720
            KKGVDCI KKP+V  DD+
Sbjct: 703 MKKGVDCIGKKPMVTGDDE 721

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460568|ref|XP_004148017.1| PREDICTED: uncharacterized protein LOC101221010 [Cucumis sativus] gi|449520032|ref|XP_004167038.1| PREDICTED: uncharacterized LOC101221010 [Cucumis sativus]

 Score =  855 bits (2210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/725 (61%), Positives = 546/725 (75%), Gaps = 46/725 (6%)

Query: 1   MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
           MA +  F+E +MA+DE +G+P+AYAK+CRDR A   GL +HGPPF FTPY L++ E++ A
Sbjct: 1   MADNCLFSEVEMAIDEAVGHPQAYAKLCRDRQA---GLYTHGPPFTFTPYSLKKRETATA 57

Query: 61  KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
           ++L+K+FP+I+PKAKPT KPK+F+SLLWKQLNHLGNAGFDPAVIRVD YGNVLYYHADSA
Sbjct: 58  RELDKLFPIINPKAKPTTKPKLFVSLLWKQLNHLGNAGFDPAVIRVDHYGNVLYYHADSA 117

Query: 121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
           SPLAW+IDHWFPCSRGGLTVPSNLRILQWQ CKRKH+K EF+VPWWD QLGISVNQFLS+
Sbjct: 118 SPLAWDIDHWFPCSRGGLTVPSNLRILQWQACKRKHHKLEFLVPWWDFQLGISVNQFLSI 177

Query: 181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
           FASSNSDFR RAFS+LF EGENEE+N SQTVESHSFPQHFVE+K +LG APA IV+SRRE
Sbjct: 178 FASSNSDFRRRAFSFLFFEGENEELNTSQTVESHSFPQHFVEAKERLGFAPAAIVLSRRE 237

Query: 241 LRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQR 300
             DS+  LRSLDYNRQ     P   +RKVKP +LKENE PDF+ NPYQAIV ARDSL+QR
Sbjct: 238 CYDSSSPLRSLDYNRQ-----PRPTARKVKPELLKENENPDFIANPYQAIVMARDSLRQR 292

Query: 301 EETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRT 360
           +E  K++ EIQ+++ EV DM+  N+EEKL IQDLEL+LIK +RRAEKCR+LAEAQSS++T
Sbjct: 293 DERAKLKAEIQRVDGEVNDMKLNNEEEKLTIQDLELKLIKHKRRAEKCRRLAEAQSSHKT 352

Query: 361 MLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEK 420
           MLEKMIRD MHQSVIYKEQ+RLNQ A+NALMARLEAQKAIC++AEKDL++K++QR+E+EK
Sbjct: 353 MLEKMIRDTMHQSVIYKEQLRLNQAASNALMARLEAQKAICNAAEKDLYQKYRQRDELEK 412

Query: 421 QLRPEREHARKRSRMDDTLFEEKDSRS-VLYLPGVKQRTPIHKELRVFLEEEQKASEAGL 479
           QLRPE + ARKR RMD  L EE DS++   +LPG+K +TP HKELR+FLEEEQ+ASE GL
Sbjct: 413 QLRPEHDQARKRLRMDKMLLEETDSKTPTFFLPGIKPKTPTHKELRLFLEEEQRASECGL 472

Query: 480 SSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAF-EEYPIEDQLKRLEIGEEKRQ-R 537
           S N E+  +E +       +   K    E  K+IV   EE  I  + + LEIGE KR   
Sbjct: 473 SQNGEQNQKESD-------VAMEKPGEHENSKAIVPLAEESLITQRFQNLEIGEAKRHDM 525

Query: 538 LQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDD 597
           L FP + +    + EEE+EE RK+RGKGN+E+WLQMLL+  QE  D +  NE+++SR+  
Sbjct: 526 LLFPFM-QESDVEEEEEDEESRKQRGKGNIEKWLQMLLDENQE--DARLQNEDESSRS-- 580

Query: 598 IIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISI 657
              K++   PQK+    T   EK      KE    E  + E +  ++ +EK   +E+   
Sbjct: 581 --TKMNANSPQKEVDVSTTTEEKNN----KETGDKERTVEEKDRIDSKSEKDVNIEE--- 631

Query: 658 VEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLIL--KKGVDCIRKKPIV 715
                        E+ E+ GKE    RS+SAR F RIPSSPSLIL  K+GVDC+ KKP+V
Sbjct: 632 ------------SEKKEQSGKEIKFTRSDSARIFRRIPSSPSLILGMKRGVDCMGKKPMV 679

Query: 716 MDDDD 720
             DD+
Sbjct: 680 SGDDN 684

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557263|ref|XP_003546937.1| PREDICTED: uncharacterized protein LOC100776970 [Glycine max]

 Score =  855 bits (2210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/721 (63%), Positives = 546/721 (75%), Gaps = 36/721 (4%)

Query: 12  MAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQLEKMFPVID 71
           MAV+E LGYPKA+AK+CRDR   G G  SHGPPF F PY L EDE+  AK L+++FP+ID
Sbjct: 1   MAVNENLGYPKAFAKLCRDR---GFGPYSHGPPFSFIPYALSEDEAETAKDLDEIFPIID 57

Query: 72  PKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPLAWEIDHWF 131
           PKAK T+KPKIF+S+LWKQL HLGNAGFDPAVIRVD YGNVLYYHADSASPLAW++DHWF
Sbjct: 58  PKAKATSKPKIFVSVLWKQLRHLGNAGFDPAVIRVDGYGNVLYYHADSASPLAWDVDHWF 117

Query: 132 PCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFASSNSDFRHR 191
           PCSRGGLTV SNLR+LQ Q CKRK NK EF+VPWWD QLGISVNQFLSVFASSNSDFRHR
Sbjct: 118 PCSRGGLTVLSNLRLLQRQACKRKKNKLEFLVPWWDFQLGISVNQFLSVFASSNSDFRHR 177

Query: 192 AFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSL 251
           AFS+LF EGEN+E+NASQ V+SHSFPQHF   K ++GLAPA IV SRRE  D AL LR L
Sbjct: 178 AFSFLFYEGENQELNASQIVDSHSFPQHFFALKEEVGLAPASIVESRREPCD-ALALRQL 236

Query: 252 DYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQMEIQ 311
           DYN++     P    R     +LKENE PDFV NPYQAIV ARDSLKQREET K Q EIQ
Sbjct: 237 DYNKK-----PMPMKR--NGSLLKENEDPDFVKNPYQAIVMARDSLKQREETTKKQAEIQ 289

Query: 312 KLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMH 371
           KL++EV +M+  N+EEKL IQDLE+ LIKRRR+AEKCR+LAEAQSSYRTMLEKMIRD MH
Sbjct: 290 KLDDEVNEMKLKNEEEKLTIQDLEMALIKRRRKAEKCRRLAEAQSSYRTMLEKMIRDTMH 349

Query: 372 QSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARK 431
           QSVIYKEQVRLNQ A+NALMARLEAQ+AICD+AEKDLHKK+KQR++IEKQ+RPE E  RK
Sbjct: 350 QSVIYKEQVRLNQAASNALMARLEAQRAICDAAEKDLHKKYKQRDDIEKQIRPEWEQGRK 409

Query: 432 RSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVE 491
           RSR+DD  +EE+DS+  LYLPG + RTP+ KELRVFLEEEQ++SE  LS+NEE++ EE  
Sbjct: 410 RSRIDDATYEERDSKPALYLPGPRPRTPLRKELRVFLEEEQRSSEVDLSANEEQKREEKV 469

Query: 492 EEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQR-LQFPVLREPEIQK 550
           E+         +E+  E+  S+   EE  IE +L++L+I E KR   + F  L + EI  
Sbjct: 470 EQ--------KREEKVEQKSSVALDEENSIEQRLQKLKISEGKRSYGISFSGLHKTEI-- 519

Query: 551 VEEEEEEIRKERGKGNVERWLQMLLENTQEE--TDPQATNENKTSRTDD-IIKKLDEKYP 607
             EE+EE RK+RGKGNVE+WLQMLLEN Q++  TDPQ T+EN +  T++ II++L++K+P
Sbjct: 520 --EEDEETRKQRGKGNVEKWLQMLLENGQQQEGTDPQETSENASCGTEEKIIQQLNQKFP 577

Query: 608 QKD----RSSVTQEPEKQ-QIVVEKEARKLEEEITEIEPAETV-TEKSNVVEQISIVEGV 661
           QK+    + S +   EKQ Q++ ++     +E+  E E    + T   N   +  I EG 
Sbjct: 578 QKELKISKVSDSDYKEKQLQLLQDRNGWTEKEDRIENEARNIIPTGYKNYSGEACIGEG- 636

Query: 662 GSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLIL--KKGVDCIRKKPIVMDDD 719
               + E  ER E+H KEK L RSESAR+  RIPSSPSL+L  KKGVD I KKP   DD 
Sbjct: 637 NCTPNVEGMERKEQHKKEKRLPRSESARSLRRIPSSPSLLLGIKKGVDYIWKKPTASDDA 696

Query: 720 D 720
           D
Sbjct: 697 D 697

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547420|ref|XP_003542110.1| PREDICTED: uncharacterized protein LOC100797659 [Glycine max]

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/738 (63%), Positives = 550/738 (74%), Gaps = 41/738 (5%)

Query: 2   AADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAK 61
           A DY F  ++MAV+E LGYPKA+AK+CRDR   G    SHGPPF F PY L EDE+ RA+
Sbjct: 4   AEDYGFLPEEMAVNENLGYPKAFAKLCRDR---GFSPYSHGPPFTFIPYVLPEDEAERAR 60

Query: 62  QLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSAS 121
            L++MFP+IDPKAK T+KPKIF+S+LWKQL HLGNAGFDPAVIRVD YGNVLYYHADSAS
Sbjct: 61  DLDEMFPIIDPKAKATSKPKIFVSVLWKQLRHLGNAGFDPAVIRVDGYGNVLYYHADSAS 120

Query: 122 PLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVF 181
           PLAW++DHWFPCSRGGLTV SNLRILQ Q CKRK NK EF+VPWWD QLGISVNQFLSVF
Sbjct: 121 PLAWDVDHWFPCSRGGLTVLSNLRILQRQACKRKKNKLEFLVPWWDFQLGISVNQFLSVF 180

Query: 182 ASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRREL 241
           ASSNSDFRHRAFS+LF EGEN+E+NASQ V+SHSFPQHF   K ++GLAPA IV SRRE 
Sbjct: 181 ASSNSDFRHRAFSFLFYEGENQELNASQIVDSHSFPQHFFPLKEEVGLAPAAIVESRREP 240

Query: 242 RDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQRE 301
            D AL LR LDYNR+ R         K     LKENE PDFV NPYQAIV ARDSLKQRE
Sbjct: 241 CD-ALVLRQLDYNRKPRPM-------KRNGNFLKENEDPDFVKNPYQAIVMARDSLKQRE 292

Query: 302 ETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTM 361
           ET KMQ EIQK+++EV +M+  N+EEKL IQDLE+ LIKRRR+AEKCR+LAEAQSSYRTM
Sbjct: 293 ETTKMQAEIQKIDDEVNEMKLKNEEEKLAIQDLEMALIKRRRKAEKCRRLAEAQSSYRTM 352

Query: 362 LEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQ 421
           LEKMIRD+MHQSVIYKEQVRLNQ A+NALMARLEAQ+ ICD+AEKDLHKK+KQR++IEKQ
Sbjct: 353 LEKMIRDSMHQSVIYKEQVRLNQAASNALMARLEAQREICDAAEKDLHKKYKQRDDIEKQ 412

Query: 422 LRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSS 481
           +RPE E  RKRSR+DD  +EE+DS+  LYLPG   RTP+HKEL VFLEEEQ++SE  LS+
Sbjct: 413 IRPEWEQGRKRSRIDDATYEERDSKPALYLPGPIPRTPLHKELGVFLEEEQRSSEVDLSA 472

Query: 482 NEERRNEEVEEEPPKL-GINFAKEKHEERDKSIVAF-EEYPIEDQLKRLEIGEEKRQR-L 538
           NEE + +E +EE  K+   N  +EK EE  KS VA  EE  IE +L++L+I E KR   +
Sbjct: 473 NEEEQKQEEKEEKMKMPDNNDLEEKLEEHTKSSVALDEENSIEQRLQKLKISEGKRSYGI 532

Query: 539 QFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENT--QEETDPQATNENKTSRTD 596
            F  L     +   EE+EE RK+RG+GNVE+WLQMLLEN   QE TDP  T+EN +  T+
Sbjct: 533 SFSGLH----KTATEEDEETRKQRGRGNVEKWLQMLLENGQQQERTDPLETSENASCGTE 588

Query: 597 D-IIKKLDEKYPQKDR--SSVTQEPEKQQIV---------VEKEARKLEEEITEIEPAET 644
           + II++L++K+PQK+   S V+    K+  +          EKE R +E E   + P   
Sbjct: 589 EKIIQQLNQKFPQKELKISKVSDSDYKENQLQLLQNRNGWTEKEDR-IENEARSVMP--- 644

Query: 645 VTEKSNVVEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLIL-- 702
            T   N   +  I  G     + E  ER E+H KEK L RSESAR   RIPSSPSL+L  
Sbjct: 645 -TGYKNYSGEACI--GANCTLNVEGMERKEQHKKEKKLPRSESARTLRRIPSSPSLLLGI 701

Query: 703 KKGVDCIRKKPIVMDDDD 720
           KKGVD IRKKP+  DD D
Sbjct: 702 KKGVDYIRKKPMASDDAD 719

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357455079|ref|XP_003597820.1| hypothetical protein MTR_2g102680 [Medicago truncatula] gi|355486868|gb|AES68071.1| hypothetical protein MTR_2g102680 [Medicago truncatula]

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/728 (60%), Positives = 537/728 (73%), Gaps = 42/728 (5%)

Query: 1   MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
           MA  + FT +++ V++ LGYPKAYAK+CRDR   G    SHGPPF F PY L EDE  R 
Sbjct: 1   MAEQFGFTSEEIVVNDNLGYPKAYAKLCRDR---GFTPYSHGPPFTFLPYALPEDEVERV 57

Query: 61  KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
             L++MFP+IDPKAKPT K KIF S+LWKQL+HLGNAGFDPAVIRVD YGNVLYYHADSA
Sbjct: 58  SFLDEMFPIIDPKAKPTTKAKIFASILWKQLSHLGNAGFDPAVIRVDGYGNVLYYHADSA 117

Query: 121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
           SPLAW+IDHWFPCSRGGLTV SNLRILQ QVCKRK +K EF+VPWWD QLGISVNQFLS+
Sbjct: 118 SPLAWDIDHWFPCSRGGLTVLSNLRILQRQVCKRKKHKLEFLVPWWDFQLGISVNQFLSI 177

Query: 181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
           FASSNSDFRHR FS+LF EGE+ E++ +Q V+SHSFPQHF+  K ++GLAPA IV SRR+
Sbjct: 178 FASSNSDFRHRGFSFLFSEGESHELHDTQIVDSHSFPQHFIGLKEEVGLAPAAIVQSRRD 237

Query: 241 LRDSALTLRSLDYNRQIRSSSPAI-ASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQ 299
             D AL LR LD++++ R  SPAI A+RK K  VLKEN  P+FV NPYQAIV ARDS KQ
Sbjct: 238 PYD-ALALRQLDHSKKTRPMSPAIVAARKTKGNVLKENADPNFVKNPYQAIVMARDSQKQ 296

Query: 300 REETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYR 359
           REET KMQ E+QKL+ EV +M+  N+EEK+ IQDLE+ LIKR+R+AEKCR+LAEAQSSYR
Sbjct: 297 REETLKMQAEMQKLDNEVNEMKLKNEEEKIVIQDLEMTLIKRKRKAEKCRRLAEAQSSYR 356

Query: 360 TMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIE 419
           TMLEKMIRD MHQSVIYKEQVRLNQ A+NALMARLEAQ+AICD+AEK+LHKK+KQ+++IE
Sbjct: 357 TMLEKMIRDTMHQSVIYKEQVRLNQAASNALMARLEAQRAICDAAEKELHKKYKQKDDIE 416

Query: 420 KQLRPEREHARKRSRMDDTLF-EEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAG 478
           KQ+RPE E  RKR R+DD+ F EE++S+SV+YLPG + RTP HKELRV L+EEQKASEAG
Sbjct: 417 KQIRPEFEQ-RKRFRIDDSTFEEERNSKSVIYLPGNRPRTPFHKELRVLLDEEQKASEAG 475

Query: 479 LSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAF-EEYPIEDQLKRLEIGEEKRQR 537
           LS+NEE    E EE                  KS+V   EE  IE +L++LEI E KR  
Sbjct: 476 LSANEEELKIEEEEPT----------------KSVVVLDEEKSIEQRLQKLEISEGKRTA 519

Query: 538 -LQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQ-EETDPQ-ATNENKTSR 594
            + F    E  +    EE+EE+R +RGKGNVE+WLQ+LLEN Q E TD Q  TN N + R
Sbjct: 520 GISFRGFHEKNV----EEDEEMRNQRGKGNVEKWLQLLLENGQGEGTDSQEETNGNASGR 575

Query: 595 TDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKL-------EEEITEIEPAETVTE 647
           T+DII++L++K+PQK+   V++  +     +EKE + L       E+E  +IE  +  T 
Sbjct: 576 TEDIIQQLNQKFPQKELLKVSKVSDSDINNIEKELQVLQDKKCWTEKEDDKIENVDDATG 635

Query: 648 KSNVVEQISIVEGVGSRKSFEVRE--RTEKHGKEKSLGRSESARAFHRIPSSPSLI--LK 703
             N   +  + E  GS +  ++ +  + E+H  EK L RSESAR   RIPSSPSL   +K
Sbjct: 636 YKNYSAEAYVGETNGSFEKTKIGKNWKEEQHKLEKRLVRSESARVLRRIPSSPSLFQGMK 695

Query: 704 KGVDCIRK 711
                I+K
Sbjct: 696 SSFKTIKK 703

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743366|emb|CBI36233.3| unnamed protein product [Vitis vinifera]

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/546 (73%), Positives = 467/546 (85%), Gaps = 7/546 (1%)

Query: 1   MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
           MA D AF+E+++A+DEGLGYPKAYAK+C +R   G+G  SHGPPF FTPY LQ+ E+ RA
Sbjct: 1   MAMDIAFSEEEVAIDEGLGYPKAYAKLCWNR---GLGPYSHGPPFTFTPYILQQHEALRA 57

Query: 61  KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
           ++L++MFP+IDPKAKPT KPKIF+SLLWKQLNHLGNAGFDPA+ RVDPYGNVLYYHADSA
Sbjct: 58  RELDQMFPIIDPKAKPTTKPKIFISLLWKQLNHLGNAGFDPAIFRVDPYGNVLYYHADSA 117

Query: 121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
           SPLAW+IDHWFPCSRGGLTVPSNLRILQWQVC+RKHNK EF+VPWWDLQLGIS+NQFLS+
Sbjct: 118 SPLAWDIDHWFPCSRGGLTVPSNLRILQWQVCRRKHNKLEFLVPWWDLQLGISINQFLSI 177

Query: 181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
           FASSNSDFRHRAFS LF EGENEE+N S TVESH+FP HF+ESK ++GLAPA +V+SRRE
Sbjct: 178 FASSNSDFRHRAFSLLFFEGENEELNDSHTVESHTFPHHFIESKEQVGLAPAAVVLSRRE 237

Query: 241 LRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQR 300
            RD +  L+SLD+NRQ R +SP +A+RK+K  V KENE PD VTNPYQAIV ARDSLKQR
Sbjct: 238 SRDPSPALKSLDFNRQPRPNSPIVAARKMKHSVSKENENPDMVTNPYQAIVMARDSLKQR 297

Query: 301 EETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRT 360
           EE  KMQ EIQKL++EV D+++ N+EEK+ IQDLE +LIKRRRRAEKCR+LAEAQSSYR 
Sbjct: 298 EEAAKMQGEIQKLDDEVNDLKQKNEEEKVLIQDLEYQLIKRRRRAEKCRRLAEAQSSYRI 357

Query: 361 MLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEK 420
           MLEKMIRDAMHQSVIYKEQVRLNQ ATNALMARLEAQKAICD++EK+LHKKFKQR+EIE 
Sbjct: 358 MLEKMIRDAMHQSVIYKEQVRLNQAATNALMARLEAQKAICDASEKELHKKFKQRDEIEY 417

Query: 421 QLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPI-HKELRVFLEEEQKASEAGL 479
           Q+RPE E  RKRSRMDD L E+ D+++VL LPG+K  + + HKELRVFLEEEQKASEA L
Sbjct: 418 QIRPEWEQGRKRSRMDDNLHEDGDNKTVLCLPGIKPSSALSHKELRVFLEEEQKASEAAL 477

Query: 480 SSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFE-EYPIEDQLKRLEIGEEKRQRL 538
           S  EER+ EE+EEE P   +N ++EK EE   SIVA E E  IE++L+ LEIGE K    
Sbjct: 478 SLIEERKQEEIEEE-PAENVN-SREKPEETRLSIVAVEDENTIEERLQALEIGEGKNYNT 535

Query: 539 QFPVLR 544
           QFPVLR
Sbjct: 536 QFPVLR 541

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240255352|ref|NP_188174.4| uncharacterized protein [Arabidopsis thaliana] gi|11994223|dbj|BAB01345.1| unnamed protein product [Arabidopsis thaliana] gi|332642171|gb|AEE75692.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/734 (56%), Positives = 519/734 (70%), Gaps = 43/734 (5%)

Query: 1   MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
           M  DY  TE+D+ ++E  GYP+AY KICRD  A       +GPPF F PY LQ++ES R 
Sbjct: 1   MMGDYGITEEDLVIEEAQGYPRAYTKICRDFDAFPY---KNGPPFTFMPYILQQNESLRC 57

Query: 61  KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
           +++++MFPVIDPKA+PT KPKIFLSLLWKQLNHLGNAGFDPAVIR+DPYGNV+Y+HADSA
Sbjct: 58  REVDQMFPVIDPKARPTTKPKIFLSLLWKQLNHLGNAGFDPAVIRIDPYGNVVYFHADSA 117

Query: 121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
           SPLAW  DHWFPCSRGGLTVPSNLRI+QWQ  K K +K EF+VPWWDLQ+GISVNQFLS+
Sbjct: 118 SPLAWSFDHWFPCSRGGLTVPSNLRIVQWQARKNKKDKLEFLVPWWDLQVGISVNQFLSI 177

Query: 181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
           FA+S+SDFR RAFS+LF EGENEE+N  Q VESH FPQHFVESK K GLA A +V SRR+
Sbjct: 178 FAASSSDFRRRAFSFLFKEGENEELNGIQMVESHHFPQHFVESKDKFGLASAAVVFSRRD 237

Query: 241 LRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQR 300
             D +L LRSLDYNRQ    +PA   RK++ G  KENETPD + NPYQAIVAARDSL+ R
Sbjct: 238 PYDPSLVLRSLDYNRQ----TPA---RKMRFGATKENETPDLMKNPYQAIVAARDSLRHR 290

Query: 301 EETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRT 360
           EE Q M+ E++KL++E  D+ R N+E++L IQ+LE EL+KRRRRAEKCR+LAE+Q SYR 
Sbjct: 291 EEAQNMRAEMKKLDDETNDLTRKNNEDRLTIQELENELVKRRRRAEKCRRLAESQCSYRN 350

Query: 361 MLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEK 420
            LEKMIRDAMHQSV+YKEQVRLNQ A++ALMARLEAQKAICD +EK+LHKKFK+REE+E 
Sbjct: 351 TLEKMIRDAMHQSVVYKEQVRLNQAASSALMARLEAQKAICDGSEKELHKKFKEREELEN 410

Query: 421 QLRPEREHARKRSRMDDTLFEEKDSRSV-----LYLPGVKQRTPIHKELRVFLEEEQK-- 473
            ++PE E ARKRSR+     ++           LYLPG  + T  HKELRV  EEE K  
Sbjct: 411 LVKPELEKARKRSRLLLNDEDDLLLDDRDRNLSLYLPGTSEETSSHKELRVHFEEEHKAA 470

Query: 474 ASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFE-EYPIEDQLKRLEIGE 532
           ASEA +  + E   EE E++ P++            +KS+VA E + P+E++    E   
Sbjct: 471 ASEAEIKKHCEIEEEEEEQKTPEVS-----------EKSLVALEDDKPVEEKPDVEEGKR 519

Query: 533 EKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKT 592
             R    F V + PE ++ EE      +ERGKGNVE+WL +LLEN   ++DP      K+
Sbjct: 520 SNRSFRAFHVFKAPENEEDEESR----RERGKGNVEKWLHILLENNS-KSDPHDLQTEKS 574

Query: 593 SRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEAR----KLEEEITEIEPAETVTEK 648
            + D++I+KLD K+P  ++     E E    +  KEA     K++EE  +++     T  
Sbjct: 575 KKIDEMIEKLDHKFPFLEK---VDEEEVDLKLQAKEANNNTSKVDEEEVDLQLQAKETNN 631

Query: 649 SNVVEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLI--LKKGV 706
           +    +I       SR SF+++   EK G++K + RSESAR F RIPSSPSLI  +KKG+
Sbjct: 632 NTSKVEIRTESSRRSRMSFDLKNTPEKSGRDKVVKRSESARTFTRIPSSPSLIFGMKKGI 691

Query: 707 DCIRKKPIVMDDDD 720
           DCIRKKP+V  +DD
Sbjct: 692 DCIRKKPVVSGNDD 705

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830140|ref|XP_002882952.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328792|gb|EFH59211.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/730 (57%), Positives = 520/730 (71%), Gaps = 42/730 (5%)

Query: 4   DYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRAKQL 63
           DY  TE+D+ ++E  GYP+AYAKICRD     V    +GPPF F PY LQ++ES R +++
Sbjct: 3   DYGITEEDLVIEEAQGYPRAYAKICRDFE---VFPYRNGPPFTFMPYILQQNESLRCREV 59

Query: 64  EKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSASPL 123
           + MFPVIDPKA+PT KPKIFLSLLWKQLNHLGNAGFDPAVIR+DPYGNV+Y+HADSASPL
Sbjct: 60  DAMFPVIDPKARPTTKPKIFLSLLWKQLNHLGNAGFDPAVIRIDPYGNVVYFHADSASPL 119

Query: 124 AWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFAS 183
           AW  DHWFPCSRGGLTVPSNLRI+QWQ  K K +K EF+VPWWDLQ+GISVNQFLS+FA+
Sbjct: 120 AWSFDHWFPCSRGGLTVPSNLRIVQWQARKNKKDKLEFLVPWWDLQVGISVNQFLSIFAA 179

Query: 184 SNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRD 243
           S+SDFR RAFS+LF EGENEE+N  Q VESH FPQHFVESK K GLA A +VVSRR+  D
Sbjct: 180 SSSDFRRRAFSFLFKEGENEELNGIQMVESHHFPQHFVESKEKFGLASAAVVVSRRDPYD 239

Query: 244 SALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREET 303
            +L LRSLD NRQ    +PA   RK++ G  KENETPD + NPYQAIVAARDSL+ REE 
Sbjct: 240 PSLVLRSLDCNRQ----TPA---RKMRFGAAKENETPDLMKNPYQAIVAARDSLRHREEA 292

Query: 304 QKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLE 363
           Q M+ E++KL++E  D+ R N E++L IQ+LE EL+KRRRRAEKCR+LAEAQ SYR  LE
Sbjct: 293 QNMRAEMKKLDDETNDLTRKNSEDRLSIQELENELVKRRRRAEKCRRLAEAQCSYRNTLE 352

Query: 364 KMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLR 423
           KMIRDAMHQSV+YKEQVRLNQ A++ALMARLEAQKAICD +EK+LHKKFK+REE+E Q+R
Sbjct: 353 KMIRDAMHQSVVYKEQVRLNQAASSALMARLEAQKAICDGSEKELHKKFKEREELENQVR 412

Query: 424 PEREHARKRS-----RMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAG 478
           PE E ARKRS       DD L +++D +  LYLPG  + T  HKELRV  EEE KA+   
Sbjct: 413 PELEKARKRSRLLLNDEDDLLLDDRDRKLSLYLPGTSEETSSHKELRVHFEEEHKAA--- 469

Query: 479 LSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEY-PIEDQLKRLEIGEEKRQR 537
            S  E +++ E+EEE  +     A       +KS+VA E+  P+E++L   E     R  
Sbjct: 470 ASEAEIKKHCEIEEEEEQKTPEEA-------EKSLVALEDNKPVEEKLDVEEGKRGSRSF 522

Query: 538 LQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDD 597
             F V + PE ++ EE      +ERGKGNVE+WL +LLEN   ++DP      K+ + D+
Sbjct: 523 RAFHVFKAPEKEEDEESR----RERGKGNVEKWLHILLENNN-KSDPHHLETEKSKKIDE 577

Query: 598 IIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISI 657
           +I+KLD K+P  ++     E E    +  KEA     +++E E  +   +        S 
Sbjct: 578 MIEKLDHKFPFLEK---VDEEEVDLQLQAKEANNNTSKVSE-EEVDLQLQAKEANNNTSK 633

Query: 658 VEGVG-----SRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLI--LKKGVDCIR 710
           VE        SR SF+++   EK G++K + RSESAR F RIPSSPSLI  +KKG+DCIR
Sbjct: 634 VETRAESSRRSRMSFDLKNTPEKSGRDKVVKRSESARTFRRIPSSPSLIFGMKKGIDCIR 693

Query: 711 KKPIVMDDDD 720
           KKP+V  +DD
Sbjct: 694 KKPVVSRNDD 703

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242051879|ref|XP_002455085.1| hypothetical protein SORBIDRAFT_03g004110 [Sorghum bicolor] gi|241927060|gb|EES00205.1| hypothetical protein SORBIDRAFT_03g004110 [Sorghum bicolor]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 320/593 (53%), Positives = 418/593 (70%), Gaps = 52/593 (8%)

Query: 1   MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGL-CSHGPPFCFTPYPLQEDESSR 59
           MAA  AFTE++ AVD+ LGYPKAYAK+CR      VGL  SHGPP  F PY LQ  E+ R
Sbjct: 1   MAA--AFTEEEKAVDDALGYPKAYAKLCRG-GGGAVGLPYSHGPPHAFLPYILQPHEALR 57

Query: 60  AKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADS 119
           AK L +MFPV D +A PTA P+ F +LLWKQL+HLGNAGFDPA+ RVD YGNVLY HADS
Sbjct: 58  AKDLNEMFPVTDAEAPPTANPRGFANLLWKQLDHLGNAGFDPALFRVDAYGNVLYLHADS 117

Query: 120 ASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLS 179
           ASPLAW+IDHWFPC+RGG TVPSNLRI+QWQVC++K NK EF++PWWDLQLG+SVNQFLS
Sbjct: 118 ASPLAWDIDHWFPCARGGKTVPSNLRIVQWQVCRKKQNKLEFLMPWWDLQLGVSVNQFLS 177

Query: 180 VFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRR 239
           +FAS NSDFR+RAF++LF  G +EE+N+ Q VE+H+FPQHF E K K+GLAPA IV SR 
Sbjct: 178 IFASKNSDFRNRAFAFLFTHGASEELNSLQVVEAHAFPQHFSEMKTKVGLAPAAIVSSRG 237

Query: 240 ELRDSALTLRSLDYNRQIRSSSPAIASRKVK-------------PGVLKENETPD---FV 283
              D+++ L+SLD NR +R S P IA++K               P   KEN  PD   ++
Sbjct: 238 S--DNSV-LKSLDANRPLRPSYPLIAAKKFTGDRDENVNLAGQGPNSTKENNNPDADGYI 294

Query: 284 TNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRR 343
           +NPY +I  ARDSL+QREE +K Q E+ +L  E  ++++ N+EE++ IQ LE  LIKRRR
Sbjct: 295 SNPYLSIAMARDSLRQREEAKKKQAELTELENEANELKQMNEEERVAIQGLEALLIKRRR 354

Query: 344 RAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDS 403
           R EKCR+LAEAQS+Y+ +LEKMIRDAMHQSV+YKEQ+RLNQ AT+ LMARLEAQ+A+CDS
Sbjct: 355 RVEKCRRLAEAQSNYKAVLEKMIRDAMHQSVVYKEQLRLNQAATSTLMARLEAQRAMCDS 414

Query: 404 AEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQR-TPIHK 462
           +E +L KK++ R+++E+Q++PE    RKR R+DD L EE+ S SV YL   + R +P+ +
Sbjct: 415 SETELRKKYQHRDDLERQIKPE----RKRYRVDDGLLEERLSESVKYLSARRLRSSPLKQ 470

Query: 463 ELRVFLEEEQKASEAGLSSNEERRNE----------EVEEEPPKLGINFAKEKHEERDKS 512
           ELRVFLEE+Q+ S+A +S  EE   E              EP K+ INF +         
Sbjct: 471 ELRVFLEEDQRYSDAYISLGEEEIGEGTSTRTQAFSNARNEPSKV-INFPRRS------- 522

Query: 513 IVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKG 565
            ++ E+  ++ +  R  +    R++L+   ++E +  +  E +E +R  RG G
Sbjct: 523 -LSIEQNTVDTERGRTLV----REKLEELAIKERQHSRRRETKETMRS-RGTG 569

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357127491|ref|XP_003565413.1| PREDICTED: uncharacterized protein LOC100821388 [Brachypodium distachyon]

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 297/526 (56%), Positives = 389/526 (73%), Gaps = 28/526 (5%)

Query: 1   MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
           MAA  AFTE++ AVDE LGYPKAYAK+CR     G+   +HGPP  F PY LQ  E+ RA
Sbjct: 1   MAAATAFTEEERAVDESLGYPKAYAKLCRGGGLLGLPY-AHGPPHAFLPYVLQPHEALRA 59

Query: 61  KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
           K L +MFPV+D +A P A P+ F SLLWKQL+HLGNAGFDPA+ RVD YGNVLY HADSA
Sbjct: 60  KDLNEMFPVVDAEALPAANPRGFASLLWKQLDHLGNAGFDPALFRVDAYGNVLYLHADSA 119

Query: 121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
           SPLAW++ HWFPC+RGG TVPSNLR++Q QVC++K NK EF+VPWWDLQLGISV+QFLS+
Sbjct: 120 SPLAWDVHHWFPCARGGKTVPSNLRVVQAQVCRKKQNKLEFLVPWWDLQLGISVSQFLSI 179

Query: 181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
           FAS NSDFR+RAF++LF +G +EE++A Q VE+H+FPQHF E  +K+GLAPA IV +R  
Sbjct: 180 FASKNSDFRNRAFAFLFADGASEELSALQAVEAHAFPQHFSEMTKKVGLAPAAIVTARGS 239

Query: 241 LRDSALTLRSLDYNRQIRSSSPAIASRKVK-------------PGVLKENETPD---FVT 284
             DS + LRSLD NR +RS+ P IA++K                   +EN  PD   +++
Sbjct: 240 --DSPV-LRSLDANRPLRSNYPLIAAKKFSGEKDENLATHGHGTNSTRENNNPDVDGYIS 296

Query: 285 NPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRR 344
           NP+ +I  ARDSL+QREE++K Q E+ +L  E+T+M++ N++E++ IQDLE  LIKRRRR
Sbjct: 297 NPHLSIAMARDSLRQREESKKKQAELAELENELTEMQQKNEQERVAIQDLEAHLIKRRRR 356

Query: 345 AEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSA 404
            EKCR+LAEAQS+Y+ +LEKMIRDAMHQSV+YKEQ+RLNQ AT+ LMARLEAQ+A+CDS+
Sbjct: 357 VEKCRRLAEAQSNYKAVLEKMIRDAMHQSVVYKEQLRLNQAATSTLMARLEAQRAMCDSS 416

Query: 405 EKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQR-TPIHKE 463
           E +L +K++ R+++E+Q++P  + ARKR R+DD + EE    SV YL   + R +P  +E
Sbjct: 417 ETELRRKYQHRDDLERQVKPFIDQARKRYRVDDEMPEEMRPESVKYLSQRRLRSSPRKQE 476

Query: 464 LRVFLEEEQKASEAGLSSNEERRNEEV------EEEPPKLGINFAK 503
           LR FLEE  +AS+A +S  +E   +        + E PK+ INF +
Sbjct: 477 LRDFLEEAHRASDAYISLEDEEIGQGTSTIGYAKNESPKV-INFPR 521

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	721
TAIR|locus:2090151	729	AT3G15550 "AT3G15550" [Arabido	0.962	0.951	0.548	3.5e-201
DICTYBASE|DDB_G0271058	1528	vilC "villin-like protein C" [	0.482	0.227	0.225	1.3e-06
ZFIN|ZDB-GENE-030616-583	1376	acin1a "apoptotic chromatin co	0.244	0.127	0.262	1.6e-06
FB|FBgn0020503	1690	CLIP-190 "Cytoplasmic linker p	0.363	0.155	0.230	2.3e-05
UNIPROTKB|F1NGZ3	2417	F1NGZ3 "Uncharacterized protei	0.201	0.059	0.261	2.7e-05
ZFIN|ZDB-GENE-050208-317	1422	tnks1bp1 "tankyrase 1 binding	0.373	0.189	0.230	6e-05
DICTYBASE|DDB_G0275731	1385	DDB_G0275731 "Ras GTPase activ	0.255	0.132	0.260	8.1e-05
DICTYBASE|DDB_G0276103	1503	enlA "enlazin" [Dictyostelium	0.313	0.150	0.233	0.00011
ZFIN|ZDB-GENE-030131-5726	1267	eif3s10 "eukaryotic translatio	0.364	0.207	0.229	0.00012
UNIPROTKB|F1RZG8	497	MNS1 "Uncharacterized protein"	0.314	0.456	0.260	0.00012

TAIR|locus:2090151 AT3G15550 "AT3G15550" [Arabidopsis thaliana (taxid:3702)]

 Score = 1947 (690.4 bits), Expect = 3.5e-201, P = 3.5e-201
 Identities = 401/731 (54%), Positives = 499/731 (68%)

Query:     1 MAADYAFTEDDMAVDEGLGYPKAYAKICRDRSASGVGLCSHGPPFCFTPYPLQEDESSRA 60
             M  DY  TE+D+ ++E  GYP+AY KICRD  A       +GPPF F PY LQ++ES R 
Sbjct:     1 MMGDYGITEEDLVIEEAQGYPRAYTKICRDFDAFPY---KNGPPFTFMPYILQQNESLRC 57

Query:    61 KQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLYYHADSA 120
             +++++MFPVIDPKA+PT KPKIFLSLLWKQLNHLGNAGFDPAVIR+DPYGNV+Y+HADSA
Sbjct:    58 REVDQMFPVIDPKARPTTKPKIFLSLLWKQLNHLGNAGFDPAVIRIDPYGNVVYFHADSA 117

Query:   121 SPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSV 180
             SPLAW  DHWFPCSRGGLTVPSNLRI+QWQ  K K +K EF+VPWWDLQ+GISVNQFLS+
Sbjct:   118 SPLAWSFDHWFPCSRGGLTVPSNLRIVQWQARKNKKDKLEFLVPWWDLQVGISVNQFLSI 177

Query:   181 FASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRE 240
             FA+S+SDFR RAFS+LF EGENEE+N  Q VESH FPQHFVESK K GLA A +V SRR+
Sbjct:   178 FAASSSDFRRRAFSFLFKEGENEELNGIQMVESHHFPQHFVESKDKFGLASAAVVFSRRD 237

Query:   241 LRDSALTLRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQR 300
               D +L LRSLDYNRQ    +PA   RK++ G  KENETPD + NPYQAIVAARDSL+ R
Sbjct:   238 PYDPSLVLRSLDYNRQ----TPA---RKMRFGATKENETPDLMKNPYQAIVAARDSLRHR 290

Query:   301 EETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRT 360
             EE Q M+ E++KL++E  D+ R N+E++L IQ+LE EL+KRRRRAEKCR+LAE+Q SYR 
Sbjct:   291 EEAQNMRAEMKKLDDETNDLTRKNNEDRLTIQELENELVKRRRRAEKCRRLAESQCSYRN 350

Query:   361 MLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEK 420
              LEKMIRDAMHQSV+YKEQVRLNQ A++ALMARLEAQKAICD +EK+LHKKFK+REE+E 
Sbjct:   351 TLEKMIRDAMHQSVVYKEQVRLNQAASSALMARLEAQKAICDGSEKELHKKFKEREELEN 410

Query:   421 QLRPEREHARKRSRM-----DDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKA- 474
              ++PE E ARKRSR+     DD L +++D    LYLPG  + T  HKELRV  EEE KA 
Sbjct:   411 LVKPELEKARKRSRLLLNDEDDLLLDDRDRNLSLYLPGTSEETSSHKELRVHFEEEHKAA 470

Query:   475 -SEAGLSSXXXXXXXXXXXXPPKLGINFAKEKHEERDKSIVAFEE-YPIEDQLKRLEIGE 532
              SEA +               P++            +KS+VA E+  P+E+   + ++ E
Sbjct:   471 ASEAEIKKHCEIEEEEEEQKTPEVS-----------EKSLVALEDDKPVEE---KPDVEE 516

Query:   533 EKRQRLQFPVLXXXXXXXXXXXXXXXXXXXGKGNVERWLQMLLENTQEETDPQATNENKT 592
              KR    F                      GKGNVE+WL +LLEN  + +DP      K+
Sbjct:   517 GKRSNRSFRAFHVFKAPENEEDEESRRER-GKGNVEKWLHILLENNSK-SDPHDLQTEKS 574

Query:   593 SRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIXXXXXXXXXXXXXXXXXXXXXXXXKSNVV 652
              + D++I+KLD K+P  ++    +   K Q                          +N  
Sbjct:   575 KKIDEMIEKLDHKFPFLEKVDEEEVDLKLQAKEANNNTSKVDEEEVDLQLQAKETNNNTS 634

Query:   653 E-QISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLI--LKKGVDCI 709
             + +I       SR SF+++   EK G++K + RSESAR F RIPSSPSLI  +KKG+DCI
Sbjct:   635 KVEIRTESSRRSRMSFDLKNTPEKSGRDKVVKRSESARTFTRIPSSPSLIFGMKKGIDCI 694

Query:   710 RKKPIVMDDDD 720
             RKKP+V  +DD
Sbjct:   695 RKKPVVSGNDD 705

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000724 "double-strand break repair via homologous recombination" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006306 "DNA methylation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0031047 "gene silencing by RNA" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0031507 "heterochromatin assembly" evidence=RCA

GO:0045787 "positive regulation of cell cycle" evidence=RCA

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

DICTYBASE|DDB_G0271058 vilC "villin-like protein C" [Dictyostelium discoideum (taxid:44689)]

 Score = 151 (58.2 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 86/382 (22%), Positives = 166/382 (43%)

Query:   259 SSSPAIA-SRKVKPGVLKENETPDFVTN--PYQAIVAARDSLKQR----EETQKMQMEIQ 311
             S S +IA S       + EN   D  T+    QAI A  +  K+R    EE +K+++E Q
Sbjct:    99 SGSSSIALSPSTSSYSISENSGGDSSTSLLSAQAISAKEEREKRRKELEEEAKKLELEQQ 158

Query:   312 KLNEE----VTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIR 367
             K+ EE      + R   +EE+  +QDL L+    ++ +EK  +L + ++     LEK  +
Sbjct:   159 KIREEREKRKEERRLQQEEEQRKLQDL-LD----KKDSEKIEKLKQEENE---KLEKEEK 210

Query:   368 DAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPERE 427
             + + + +  K++    ++A      R E  K + D  EK+  KK K+ +E+  +L  ER 
Sbjct:   211 ERIEKELTDKKEKEEKELADKLEKERQE--KELADKLEKE--KKEKEEKELADKLEKERL 266

Query:   428 HARKRSRMDDTLFE--EKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSXXXX 485
                K+ + +  L +  EK+S+       + ++    KEL   LE+EQK  E         
Sbjct:   267 DKEKKDKEEKELADKLEKESQE----KELAEKLEKEKELADKLEKEQKEKEEKERQEKEL 322

Query:   486 XXXXXXXXPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRL--EIGEEKRQRLQFPVL 543
                       K     A +  +ER +  +A ++   E Q K L  ++ +EK+++     L
Sbjct:   323 ADKLAKEQKEKEEKELADKLEKERQEKELA-DKLEKEKQEKELADKLEKEKQEKESLEKL 381

Query:   544 XXXXXXXXXXXXXXXXXXXGKGNVERWLQMLLENTQEET-DPQATNENKTSRTDDIIK-K 601
                                 +   E+  +   E  ++E  D +       + T+ + K +
Sbjct:   382 EKEKQEKELADKLAKEQKEKEEKEEKEEKEKQEKEEKERKDKELAAAAAAAETEKLEKER 441

Query:   602 LDEKYPQKDRSSVTQEPEKQQI 623
             L+++  + +   + ++ EK+++
Sbjct:   442 LEKEKKELEEKELAEKLEKEKL 463

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

ZFIN|ZDB-GENE-030616-583 acin1a "apoptotic chromatin condensation inducer 1a" [Danio rerio (taxid:7955)]

 Score = 141 (54.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
 Identities = 51/194 (26%), Positives = 100/194 (51%)

Query:   294 RDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCR---Q 350
             +++  +RE  +K ++E +K  +E    R   ++E+L+ +  E E  + R R +K R   +
Sbjct:   575 KEAALERERLEKERIEKEKREKEEALERERLEKERLEKEKREKEEAQERERLKKERLEKE 634

Query:   351 LAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMAR--LEAQKAICDSAEKD- 407
               EA    R   E+  ++A+ +  + KE++   +    A + R  LE ++   +  EK+ 
Sbjct:   635 KKEALEKERLEKERQEKEAVERERLEKERLEKEKREKEAALERERLEKERIEKEKREKEE 694

Query:   408 -LHKKFKQREEIEKQLRPEREHARKRSRMD-DTLFEEKDSRSVLYLPGVKQRTPIHKELR 465
              L ++  ++E +EK+ R E+E A +R R++ + L +E+  + VL      +R  + KE  
Sbjct:   695 ALERERLEKERLEKEKR-EKEEALERERLEKERLEKERQEKEVL------ERERLEKER- 746

Query:   466 VFLEEEQKASEAGL 479
               LE+E+K  E  L
Sbjct:   747 --LEKERKEQEEAL 758

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

FB|FBgn0020503 CLIP-190 "Cytoplasmic linker protein 190" [Drosophila melanogaster (taxid:7227)]

 Score = 140 (54.3 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 66/286 (23%), Positives = 129/286 (45%)

Query:   203 EEINASQTVESHSFPQHFVESKRKLGLAPAGIVVSRRELRDSALTLRSLDYN--RQIRSS 260
             E++  +Q  E     Q    SK KL      I  S +EL+DS      L  N   ++R S
Sbjct:  1196 EKLKQAQQSEQ-KLQQESQTSKEKL----TEIQQSLQELQDSVKQKEELVQNLEEKVRES 1250

Query:   261 SPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQK-MQMEIQKLNEEVTD 319
             S  I ++  K   L E+     + N    +   +D L + ++ +K +Q E  KL+ E+  
Sbjct:  1251 SSIIEAQNTK---LNESNVQ--LENKTSCLKETQDQLLESQKKEKQLQEEAAKLSGELQQ 1305

Query:   320 MRRANDEEKLDIQDLELELIK--RRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYK 377
             ++ AN + K  +  +E EL+K    +      QL   Q++ + + E +++   ++  +  
Sbjct:  1306 VQEANGDIKDSLVKVE-ELVKVLEEKLQAATSQLDAQQATNKELQELLVKSQENEGNLQG 1364

Query:   378 EQVRLNQVATNALMARLEAQKAIC--DSAEKDLHKKFKQREEI-EKQLRPEREHARK--R 432
             E + + +       A  E ++A+C  ++  K+L  K  +   + E Q +   E   K  +
Sbjct:  1365 ESLAVTEKLQQLEQANGELKEALCQKENGLKELQGKLDESNTVLESQKKSHNEIQDKLEQ 1424

Query:   433 SRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAG 478
             ++  +   +E+ S+    L  +KQ    ++EL+  L+++Q   E G
Sbjct:  1425 AQQKERTLQEETSKLAEQLSQLKQA---NEELQKSLQQKQLLLEKG 1467

GO:0008017 "microtubule binding" evidence=ISS;IDA

GO:0005875 "microtubule associated complex" evidence=ISS;IDA

GO:0003779 "actin binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005938 "cell cortex" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0007349 "cellularization" evidence=IMP

GO:0007017 "microtubule-based process" evidence=ISS

GO:0045169 "fusome" evidence=IDA

GO:0005876 "spindle microtubule" evidence=IDA

GO:0051010 "microtubule plus-end binding" evidence=IDA

GO:0000776 "kinetochore" evidence=IDA

GO:0035371 "microtubule plus end" evidence=IDA

UNIPROTKB|F1NGZ3 F1NGZ3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 141 (54.7 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 40/153 (26%), Positives = 80/153 (52%)

Query:   294 RDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAE 353
             +D  +++E+T+  Q +IQ+L ++    R    +   D++D + E+   R + E+  +L +
Sbjct:  1422 KDIKEKKEKTESQQEQIQELEKQQELQRTVISKMSKDLEDRDKEI---RSQQEEIWELEK 1478

Query:   354 AQSSYRTMLEKMIRDAMHQSV-IYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKF 412
              Q   RT++ KM +D  H+   I  +Q  + ++     + R  A K   D  E+D  +K 
Sbjct:  1479 QQELQRTVVSKMTKDLAHRDQEIQSQQEEIQELEKERELQRTAASKMSKDLKERD--EKI 1536

Query:   413 KQREEIEKQLRPEREHARKR-SRMDDTLFEEKD 444
             + ++E+ ++L  ++E  R   S+M   L EE+D
Sbjct:  1537 RSQQELIEELEKQQELQRTALSKMSKNL-EERD 1568

GO:0000278 "mitotic cell cycle" evidence=IEA

GO:0005814 "centriole" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0010457 "centriole-centriole cohesion" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0030997 "regulation of centriole-centriole cohesion" evidence=IEA

GO:0031616 "spindle pole centrosome" evidence=IEA

ZFIN|ZDB-GENE-050208-317 tnks1bp1 "tankyrase 1 binding protein 1" [Danio rerio (taxid:7955)]

 Score = 142 (55.0 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
 Identities = 68/295 (23%), Positives = 132/295 (44%)

Query:   264 IASRKVKPGVLKENETPDFVTNPYQAIVAARDSLKQREETQKMQM-----EIQKLNEEVT 318
             +   + K  V KE E  +      Q +   ++  ++R+E ++M+      EI++    + 
Sbjct:   498 LRQEREKERVKKEKEMEE-ERQRVQELERQKEEERRRKEEEEMERIRKEKEIEEERRRIQ 556

Query:   319 DMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKE 378
             ++ R  +EE+L  ++ E+E I++ +  E+ R+    Q   R M E+ +R       I KE
Sbjct:   557 ELERQMEEERLR-KEQEMERIRKEKEMEEERR--RIQELERQMEEERLRKEQEMERIRKE 613

Query:   379 QV------RLNQVATNALMARLEAQKAICD-SAEKDLHKKFKQREEIEKQLRPER---EH 428
             +       R+ ++       RL  ++ I     EK++ ++ ++ +E+E+Q   ER   E 
Sbjct:   614 KEMEEERRRIQELERQKEEDRLRKEREIARLKKEKEMEEERRRIQELERQKEEERLRKEQ 673

Query:   429 ARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKEL---RVFLEEEQKASEAGLSSXXXX 485
               +R + +  + EEK  R +  L   K+   + KE    R+  E+E +     +      
Sbjct:   674 EIERIKKEKEI-EEKRQR-IQELERQKEEERLRKEREMERIRKEKEIEEERLRIQELERQ 731

Query:   486 XXXXXXXXPPKLG-INFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQ 539
                       ++  I   KE  EER + I   E    E++L++    EE+RQR+Q
Sbjct:   732 KEEERLRKEQEMERIKKEKEMEEER-RRIQKLERQKEEERLRKEREMEEERQRIQ 785

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

DICTYBASE|DDB_G0275731 DDB_G0275731 "Ras GTPase activation domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 134 (52.2 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 50/192 (26%), Positives = 97/192 (50%)

Query:   285 NPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRR 344
             N   AI   R   +++  T + ++E ++L  E  +  R  + E+L+ + LE E ++R R 
Sbjct:   310 NSEAAIANLRKEREEKHRTDQERLERERLERERIERERL-ERERLEQERLERERLERER- 367

Query:   345 AEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNAL-MARLEAQKAICDS 403
              EK RQ  E     R  LE++ R+ + Q  + +E++   ++    L   RLE ++   + 
Sbjct:   368 LEKQRQEMERIEQERIELERLERERLEQERLEQERIERERLERERLEQERLEQERLERER 427

Query:   404 AEKD-LHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVK-QRTPIH 461
              E++ L  +  +RE +E++ R E+E   +R R++    E  +   + Y    + +R  I 
Sbjct:   428 LEQERLECERLERERLEQE-RLEQERL-ERERIELEELERIERERLEYEERERIERERIE 485

Query:   462 KELRVFLEEEQK 473
             +E R  LEE+++
Sbjct:   486 RE-REELEEQER 496

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0043547 "positive regulation of GTPase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

DICTYBASE|DDB_G0276103 enlA "enlazin" [Dictyostelium discoideum (taxid:44689)]

 Score = 133 (51.9 bits), Expect = 0.00011, P = 0.00011
 Identities = 58/248 (23%), Positives = 118/248 (47%)

Query:   299 QREETQKMQMEIQ----KLNEE-VTDMRRANDEEKLDIQDLELELIKRRR-RAEKCRQLA 352
             + EE  K+ +E +    KL E+   D+R+  +E++L ++  +  + K+++   EK RQL 
Sbjct:   421 EEEEMVKLMIEEEERRRKLEEKRQEDLRKIQEEQELLVKQQQEFIAKQQQLELEKQRQLQ 480

Query:   353 EAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKF 412
             +     R + E M++  M Q    +E++++ +        +LE  K + +  EK   K+ 
Sbjct:   481 DQLEEDRRLEELMLQMEMDQ----EERIKVKEEQERQEQEKLELAKKMQEEEEK--LKEE 534

Query:   413 KQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQ 472
             ++R  +E++ R E+E   +  RM+    EE+   ++       ++  I KE R   EEE+
Sbjct:   535 QERIRLEQE-RVEKERQEEEKRMELERIEEERLEAIRI-----EKVRIEKEERERKEEEE 588

Query:   473 KASEAGLSSXXXXXXXXXXXXPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGE 532
             +  +                   K+   F +EK ++ +  ++  E   +E +L R E  E
Sbjct:   589 RKEKE--RKRQEEEERIKKEQEEKIR-QFEEEKKKQEELRLIEQERIRVEQELIRKERLE 645

Query:   533 -EKRQRLQ 539
              E++QR++
Sbjct:   646 LEEKQRIE 653

GO:0031589 "cell-substrate adhesion" evidence=IMP

GO:0005938 "cell cortex" evidence=IDA

GO:0000916 "actomyosin contractile ring contraction" evidence=IGI

GO:0000910 "cytokinesis" evidence=IGI

GO:0051015 "actin filament binding" evidence=ISS

GO:0005543 "phospholipid binding" evidence=IEA

ZFIN|ZDB-GENE-030131-5726 eif3s10 "eukaryotic translation initiation factor 3, subunit 10 (theta)" [Danio rerio (taxid:7955)]

 Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
 Identities = 66/288 (22%), Positives = 129/288 (44%)

Query:   259 SSSPAIASRKVKPG-VLKENETPDFVTNPYQAIVA-ARDSLKQREETQKMQMEIQKLNEE 316
             SSS A A + +KP  +L+++E         QAI A  +++ K+ +     +  I++  E 
Sbjct:   527 SSSLAKAIQVIKPASILQDHEE-----QRQQAITAYLKNARKEHQRILARRQTIEERKER 581

Query:   317 VTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIY 376
             +  +    ++E+L+ ++ EL+ + R+   E+ RQ A+ +   R M E       H+ +  
Sbjct:   582 LESLNIQREKEELEQREAELQKV-RKAEEERLRQEAKEREKERIMQE-------HEQIKK 633

Query:   377 KE-QVRLNQVATNALMARLEAQKAICDSAEKDLHKKF-KQREEIEKQLRPEREHARKRSR 434
             K  + RL Q+    L A+      I D  E D      KQ E++EK+ +  +E  + + +
Sbjct:   634 KTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEK 693

Query:   435 MDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVF-LEEEQKASEAGLSSXXXXXXXXXXXX 493
               D     K    +  +    +   I K++ ++ L+EE++ +   +              
Sbjct:   694 KIDYFERAKRLEEIPLIKKAYEEQRI-KDMELWELQEEERITNMKMEREKALEHKQRMSR 752

Query:   494 PPKLGINFAKEKHEER----DKSIVAFEEYPIEDQLKRLEIGEEKRQR 537
               +   NF  +    R    ++ +  F+E  +E++ KRLE  E K+QR
Sbjct:   753 MMEDKENFLSKIKAARSFIYEEKLKQFQERLVEERKKRLE--ERKKQR 798

GO:0001732 "formation of translation initiation complex" evidence=ISS

GO:0005852 "eukaryotic translation initiation factor 3 complex" evidence=ISS

GO:0003743 "translation initiation factor activity" evidence=IEA;ISS

GO:0006413 "translational initiation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006412 "translation" evidence=IEA

UNIPROTKB|F1RZG8 MNS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
 Identities = 66/253 (26%), Positives = 122/253 (48%)

Query:   239 RELRDSALT-LRSLDYNRQIRSSSPAIASRKVKPGVLKENETPDFVTNPYQAIVAARDSL 297
             ++L   AL  L++   N+ +R+ +   A  K    +L +NE   F  +  +AI  A ++ 
Sbjct:    23 KKLHVEALKKLQNQVRNQMVRNENDDRAEHKRFLRLL-QNE--QFELDMEEAIQKAEENR 79

Query:   298 KQRE----ETQKMQMEIQKL-NEEVTD--MRRANDEEKLDIQDLELELIKRRRRAEKCRQ 350
             + RE    + +K+ +E+ KL +E + D  MR+   E  +++++LE +L       E+  Q
Sbjct:    80 RLRECQLEQEEKLALELAKLKHESLKDEKMRQQVRENSIELRELEKKLQAAYMNKERAAQ 139

Query:   351 LAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRL--NQVATNALMARLEAQKAICDSAEKDL 408
             +AE  +      E+M RDA     + +E  RL   + AT     +++AQ  +    EK L
Sbjct:   140 IAEKDA---IKYEQMKRDAEIAKTMMEEHERLIKEENATEDKRNKVKAQYNL--DLEKQL 194

Query:   409 HKKFKQREEIEKQLRPER----EHARKRSRMDDTLFE---EKDSRSVLYLPGVKQRTPI- 460
              ++ K+++E  +QL  E+    E  RK    D    +   EK   +  Y+   K++  + 
Sbjct:   195 EEQEKKKQEAYEQLLKEKLMIDEIVRKIYEEDQLERQQKLEKMKTTQRYIEEFKKQQAVW 254

Query:   461 HKELRVFLEEEQK 473
              K+ R  +EEE +
Sbjct:   255 RKKKREEMEEENR 267

GO:0005882 "intermediate filament" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	721
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	6e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	7e-04
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.001
COG0419	908	COG0419, SbcC, ATPase involved in DNA repair [DNA	0.001
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.002
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.002
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.002
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	0.002
TIGR02169	1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.004

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.3 bits (109), Expect = 6e-05
 Identities = 66/390 (16%), Positives = 154/390 (39%), Gaps = 9/390 (2%)

Query: 295  DSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRR-----RRAEKCR 349
            D+ K++ E  K   E  K   E         EEK +  + + E  K++     ++AE+ +
Sbjct: 1332 DAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391

Query: 350  QLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLH 409
            +  EA+       +K   D + ++   K++    +          EA+K   ++ + D  
Sbjct: 1392 KADEAKKKAEEDKKKA--DELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449

Query: 410  KKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLE 469
            KK  +  +  ++ + + E A+K         E K +         ++      E +   E
Sbjct: 1450 KKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAK--KKAEEAKKKADEAKKAAE 1507

Query: 470  EEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLE 529
             ++KA EA  +   ++ +E  + E  K      K + +++   +   EE    ++ K+ E
Sbjct: 1508 AKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAE 1567

Query: 530  IGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNE 589
              ++  +     + +  E +K EE   E   +  +   +   +   +  + +   +   +
Sbjct: 1568 EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK 1627

Query: 590  NKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKS 649
             +  +      K  E   +K    + +  E+ +I   +EA+K EE+  + E A+   E  
Sbjct: 1628 AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687

Query: 650  NVVEQISIVEGVGSRKSFEVRERTEKHGKE 679
                +    E   ++K+ E++++  +  K+
Sbjct: 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 45.1 bits (106), Expect = 2e-04
 Identities = 62/356 (17%), Positives = 145/356 (40%), Gaps = 31/356 (8%)

Query: 295  DSLKQREETQKMQMEIQKLNEEV--TDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLA 352
            D  K++ E  K   E +K  EE    D  +   EE     + + +  + +++A++ ++ A
Sbjct: 1447 DEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAA 1506

Query: 353  EAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKK- 411
            EA+                      ++ +  + A  A  A+   +    D A+K   KK 
Sbjct: 1507 EAKKK-------------------ADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKK 1547

Query: 412  ---FKQREEIEK--QLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRV 466
                K+ EE++K  + +   E  +     +  L + ++++        +      +E ++
Sbjct: 1548 ADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607

Query: 467  FLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLK 526
              EE +KA EA + + E ++ EE +++  +L    A+EK +  +      E      +  
Sbjct: 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEA 1667

Query: 527  RLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQA 586
            +    E+K++  +    ++ E  + +  E   ++       E   +   E  ++  + + 
Sbjct: 1668 KKA-EEDKKKAEE---AKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKK 1723

Query: 587  TNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPA 642
              E    + ++  K+ +E   + + +   +E +K+   ++KE  K  EEI + + A
Sbjct: 1724 AEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEA 1779

Length = 2084

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 42.7 bits (101), Expect = 7e-04
 Identities = 54/282 (19%), Positives = 113/282 (40%), Gaps = 22/282 (7%)

Query: 288  QAIVAARDSLKQ-REETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKR-RRRA 345
            Q I   +  LK+     ++++ ++ KL E + D+       ++     EL  ++    R 
Sbjct: 751  QEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRI 810

Query: 346  EKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAE 405
            E   +  E + +  T+ ++ +   + +    +  ++    +    +  L  +K   +   
Sbjct: 811  EARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEEL 870

Query: 406  KDLHKKFKQREEIEKQLRPEREHARKRSR-MDDTLFEEKDSRSVLYLPGVKQRTPIHKEL 464
            ++L    +  E     L+ ER+    + R ++  + E +           ++R    K  
Sbjct: 871  EELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKK-----RKRLSELKAK 925

Query: 465  RVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEER-----DKSIVAFEEY 519
               LEEE    E     +E    E  EEE     +    ++ EE        +++A +EY
Sbjct: 926  LEALEEELSEIEDPKGEDE----EIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEY 981

Query: 520  PIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKE 561
              E+ LKRL+  +EKR +L+        I +  EE E+ ++E
Sbjct: 982  --EEVLKRLDELKEKRAKLE---EERKAILERIEEYEKKKRE 1018

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 42.4 bits (100), Expect = 0.001
 Identities = 70/366 (19%), Positives = 147/366 (40%), Gaps = 66/366 (18%)

Query: 284 TNPYQAIVAARDSLKQ-REETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRR 342
           +   ++ +A +  LK+  EE  +++ +++KL EE+  ++      +  +++L  +L +  
Sbjct: 656 SRNKRSSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELE 715

Query: 343 RRAEKCRQLAEAQS-------SYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLE 395
           R+ E+ ++   A         S    LE+ + +   +    +E++   +    +L   L 
Sbjct: 716 RQLEELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALA 775

Query: 396 AQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVK 455
             K   +  E+      ++ EE+E++L           R+D    E +           +
Sbjct: 776 KLKEEIEELEEKRQALQEELEELEEELE------EAERRLDALERELESLE--------Q 821

Query: 456 QRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVA 515
           +R  + +E+   LEEE +  E  L   EE   E  +E      +   KE+ EE +     
Sbjct: 822 RRERLEQEIE-ELEEEIEELEEKLDELEEELEELEKE------LEELKEELEELEAEKEE 874

Query: 516 FEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLL 575
                +ED+LK LE  +E+ +          E++++E E  E+++E  K   ER  ++  
Sbjct: 875 -----LEDELKELEEEKEELEE---------ELRELESELAELKEEIEK-LRERLEELEA 919

Query: 576 ENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEE 635
           +  + E +     E                          +  +  +  +E+E  +LEEE
Sbjct: 920 KLERLEVELPELEEELEE----------------------EYEDTLETELEREIERLEEE 957

Query: 636 ITEIEP 641
           I  + P
Sbjct: 958 IEALGP 963

Length = 1163

>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]

 Score = 42.1 bits (99), Expect = 0.001
 Identities = 63/348 (18%), Positives = 135/348 (38%), Gaps = 24/348 (6%)

Query: 297 LKQREETQKMQMEIQKLNEEVTDMRRANDE-EKLDIQDLELELIKRRRRAEKCRQLAEAQ 355
              R   ++++  ++KL      + +  ++ EKL+ +  EL   K         +L E +
Sbjct: 308 EGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELE 367

Query: 356 SSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQR 415
                + +++ +          E+++  + A   L   L    A  +  +++L +  K+ 
Sbjct: 368 ERLEELEKELEKAL--------ERLKQLEEAIQELKEELAELSAALEEIQEELEELEKEL 419

Query: 416 EEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKAS 475
           EE+E++L    E  +K     + L  ++   + L   G K      +EL    EE +K  
Sbjct: 420 EELERELEELEEEIKKLEEQINQLESKELMIAELAGAGEKCPV-CGQELP---EEHEKEL 475

Query: 476 EAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKR 535
                   E   EE+  E  +  +   +E+ EE +K +   EE       + +E+ E + 
Sbjct: 476 LELYELELEELEEELSREKEEAEL---REEIEELEKELRELEE-------ELIELLELEE 525

Query: 536 QRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRT 595
              +    +  +++    EE E  KE+ +    +     LE+  +E              
Sbjct: 526 ALKEELEEKLEKLEN-LLEELEELKEKLQLQQLKEELRQLEDRLQELKELLEELRLLRTR 584

Query: 596 DDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAE 643
            + +++L E+  +  +     E    Q+    ++ +L E   E+E AE
Sbjct: 585 KEELEELRERLKELKKKLKELEERLSQLEELLQSLELSEAENELEEAE 632

Length = 908

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 41.7 bits (97), Expect = 0.002
 Identities = 84/418 (20%), Positives = 166/418 (39%), Gaps = 44/418 (10%)

Query: 295  DSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRR----RRAEKCRQ 350
            D LK+    +K   E +K  EE    ++A++ +K   +  + +  K++    ++AE+ ++
Sbjct: 1408 DELKKAAAAKKKADEAKKKAEEK---KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK 1464

Query: 351  LAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHK 410
             AE         +K            +E  + ++    A  A+ +A +A   +  K    
Sbjct: 1465 KAEEAKKADEAKKKA-----------EEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAD 1513

Query: 411  KFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEE 470
            + K+ EE +K    ++    K++       E+K +  +     +K+     K       E
Sbjct: 1514 EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAE 1573

Query: 471  EQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEI 530
            E K      +   ++  E   EE  KL     K K EE  K   A E     ++LK+ E 
Sbjct: 1574 EDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKK---AEEAKIKAEELKKAE- 1629

Query: 531  GEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNEN 590
             EEK++  Q        ++K E EE++  +E  K   E  ++   E  + E D +   E 
Sbjct: 1630 -EEKKKVEQ--------LKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEE- 1679

Query: 591  KTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSN 650
                     KK +E   +   +   +  E ++   E+  +K  EE  + E  +   E++ 
Sbjct: 1680 --------AKKAEEDEKKAAEALKKEAEEAKK--AEELKKKEAEEKKKAEELKKAEEENK 1729

Query: 651  V-VEQISIVEGVGSRKSFEVRERTEKHGKEKSLGRSESARAFHRIPSSPSLILKKGVD 707
            +  E+         +K+ E ++  E+  K   L + E  +A   I      ++++ +D
Sbjct: 1730 IKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKA-EEIRKEKEAVIEEELD 1786

Length = 2084

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 41.6 bits (98), Expect = 0.002
 Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 37/274 (13%)

Query: 298  KQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSS 357
            +  EE + ++  + KL EE+ ++       + ++++LE EL +  RR +   +  E+   
Sbjct: 762  ELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQ 821

Query: 358  YRTMLEKMIRDAMHQSVIYKEQ--------VRLNQVATNALMARLEAQKAICDSAEKDLH 409
             R  LE+ I +   +    +E+          L +          E +    +  E +L 
Sbjct: 822  RRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEK-EELEDELK 880

Query: 410  KKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLE 469
            +  +++EE+E++LR E E      + +     E+       L    +R  +  EL    E
Sbjct: 881  ELEEEKEELEEELR-ELESELAELKEEIEKLRERLEE----LEAKLERLEV--ELPELEE 933

Query: 470  EEQKASEAGLSSNEERRNEEVEEEPPKLG-INFAKEKHEERDKSIVAFEEYPIEDQLKRL 528
            E ++  E  L +  ER  E +EEE   LG +N              A EEY  E+  +R 
Sbjct: 934  ELEEEYEDTLETELEREIERLEEEIEALGPVNLR------------AIEEY--EEVEERY 979

Query: 529  EIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKER 562
            E  + +R+ L      E   +K+ E  EE+ KE+
Sbjct: 980  EELKSQREDL------EEAKEKLLEVIEELDKEK 1007

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 41.2 bits (97), Expect = 0.002
 Identities = 52/278 (18%), Positives = 104/278 (37%), Gaps = 46/278 (16%)

Query: 287 YQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIK-RRRRA 345
            + +    +  ++  E  K   E+++L EE+ +++    E K +I++LE E+   R R  
Sbjct: 255 LEELQEELEEAEKEIEELKS--ELEELREELEELQEELLELKEEIEELEGEISLLRERLE 312

Query: 346 EKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAE 405
           E   +L E +     + EK+                    A    +   E      +   
Sbjct: 313 ELENELEELEERLEELKEKI-------------------EALKEELEERETLLEELEQLL 353

Query: 406 KDLHKKFKQREEIEKQLR--PEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKE 463
            +L +  ++ EE    L    E      R  + +   E  + R         +   + +E
Sbjct: 354 AELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEIR--------NELEELKRE 405

Query: 464 LRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIED 523
           +    E  ++     LS   E   EE++E   +L     + + EE ++ +   EE  +E+
Sbjct: 406 IESLEERLER-----LSERLEDLKEELKELEAEL--EELQTELEELNEELEELEE-QLEE 457

Query: 524 QLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKE 561
              RL+  E +   LQ       E+Q++E+E   +   
Sbjct: 458 LRDRLKELERELAELQ------EELQRLEKELSSLEAR 489

Length = 1163

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 41.2 bits (97), Expect = 0.002
 Identities = 61/304 (20%), Positives = 119/304 (39%), Gaps = 39/304 (12%)

Query: 288 QAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEK 347
           +  +      + REE +++Q E+++  EE+ ++     E +  +++L LE       +E 
Sbjct: 226 ELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLE------VSEL 279

Query: 348 CRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKD 407
             ++ E Q     +  + I     Q  I +E++   +     L A+LE  ++  D   ++
Sbjct: 280 EEEIEELQKELYALANE-ISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEE 338

Query: 408 LHKKFKQREEIEKQ----------LRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQR 457
           L +  ++ EE++++          L  E E    R    +   E   S+         Q 
Sbjct: 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLE---LQI 395

Query: 458 TPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFE 517
             ++ E+   LE   +  E       ER  +E+EE   KL     KE   E     +   
Sbjct: 396 ASLNNEIER-LEARLERLED----RRERLQQEIEELLKKLEEAELKELQAE-----LEEL 445

Query: 518 EYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLEN 577
           E  +E+  + LE  EE  + L+         +++EE E+ +     +    +     LE 
Sbjct: 446 EEELEELQEELERLEEALEELR---------EELEEAEQALDAAERELAQLQARLDSLER 496

Query: 578 TQEE 581
            QE 
Sbjct: 497 LQEN 500

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type

 Score = 40.1 bits (94), Expect = 0.004
 Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 18/162 (11%)

Query: 289 AIVAARDSLKQREET-QKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEK 347
           +I      L+  EE   K++ EI KL  E+ ++ R  +EE+     L  E  + +   E 
Sbjct: 309 SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELED 368

Query: 348 CRQLAEA-----------QSSYRTMLEKMIRD-AMHQSVIYKEQVRLNQVAT-----NAL 390
            R   E               YR  LEK+ R+    +  + + Q  L +++      NA 
Sbjct: 369 LRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAA 428

Query: 391 MARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKR 432
           +A +EA+    +  ++D   + K++E   +QL  +     + 
Sbjct: 429 IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE 470

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1164

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	721
PF13395	54	HNH_4: HNH endonuclease	98.18
PF01844	47	HNH: HNH endonuclease; InterPro: IPR002711 HNH end	97.98
cd00085	57	HNHc HNH nucleases; HNH endonuclease signature whi	97.64
TIGR01865	805	cas_Csn1 CRISPR-associated protein, Csn1 family. C	96.73
COG1403	146	McrA Restriction endonuclease [Defense mechanisms]	96.54
smart00507	52	HNHc HNH nucleases.	96.41
PRK11295	113	hypothetical protein; Provisional	90.14
TIGR02646	144	conserved hypothetical protein TIGR02646. Members	82.98

>PF13395 HNH_4: HNH endonuclease

Probab=98.18  E-value=7.1e-07  Score=70.66  Aligned_cols=38  Identities=39%  Similarity=0.471  Sum_probs=36.2

Q ss_pred             eeecceeeecCCCCcccccchhhhhHhhhcccCCCCcc
Q 047330          124 AWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEF  161 (721)
Q Consensus       124 gWEIDHIfP~SRGG~Tv~sNLQiLQWqvNr~KsNKle~  161 (721)
                      -++||||+|+|+||.....||.+.+-.+|+.|+||+.|
T Consensus        17 ~~~iDHiiP~s~~~~~s~~Nlvl~~~~~N~~K~~k~P~   54 (54)
T PF13395_consen   17 KYEIDHIIPRSRGGDDSFWNLVLCCKECNRSKGNKTPF   54 (54)
T ss_pred             CceeEEEecccccCCCCcchhheECHHHhhcccccCCC
Confidence            48999999999999999999999999999999999875

>PF01844 HNH: HNH endonuclease; InterPro: IPR002711 HNH endonuclease is found in bacteria and viruses [, , ]

Probab=97.98  E-value=1.2e-06  Score=64.99  Aligned_cols=36  Identities=31%  Similarity=0.439  Sum_probs=28.3

Q ss_pred             ceeecceeeecCCCCcccccchhhhhHhhhcccCCC
Q 047330          123 LAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNK  158 (721)
Q Consensus       123 LgWEIDHIfP~SRGG~Tv~sNLQiLQWqvNr~KsNK  158 (721)
                      ..|++|||.|++.||.++++||++|.+..|+.|++|
T Consensus        12 ~~~~v~Hi~~~~~gg~~~~~Nl~~lC~~Ch~~k~~k   47 (47)
T PF01844_consen   12 ESLHVHHIIPRSKGGKNDLENLILLCPSCHRKKHDK   47 (47)
T ss_dssp             -GEEEEESS-TTTT---STTTEEEEEHHHHHHHH--
T ss_pred             cceEeECcCchhcCCCCCHHHHHHHhHHHHHHhcCC
Confidence            579999999999999999999999999999999875

This family includes pyocins, colicins and anaredoxins.; GO: 0003676 nucleic acid binding, 0004519 endonuclease activity; PDB: 2QGP_C.

>cd00085 HNHc HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins

Probab=97.64  E-value=2e-05  Score=58.22  Aligned_cols=35  Identities=34%  Similarity=0.488  Sum_probs=32.3

Q ss_pred             CceeecceeeecCCCCcccccchhhhhHhhhcccC
Q 047330          122 PLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKH  156 (721)
Q Consensus       122 pLgWEIDHIfP~SRGG~Tv~sNLQiLQWqvNr~Ks  156 (721)
                      +-.|++|||.|++.||.+.++||++|.+..|+.|.
T Consensus        23 ~~~~~v~Hi~p~~~~~~~~~~Nl~~~c~~ch~~~~   57 (57)
T cd00085          23 TEGLEVDHIIPLSDGGNNDLDNLVLLCRKCHRKKH   57 (57)
T ss_pred             CCCceEEeecchhhCCCCchHHhHHHHHHHhhccC
Confidence            35799999999999999999999999999998874

The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.

>TIGR01865 cas_Csn1 CRISPR-associated protein, Csn1 family

Probab=96.73  E-value=0.00053  Score=78.55  Aligned_cols=39  Identities=26%  Similarity=0.242  Sum_probs=36.9

Q ss_pred             eeecceeeecCCCCcccccchhhhhHhhhcccCCCCccc
Q 047330          124 AWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFV  162 (721)
Q Consensus       124 gWEIDHIfP~SRGG~Tv~sNLQiLQWqvNr~KsNKle~l  162 (721)
                      .++||||+|+|+||.+..+|+-+.+-.+|+.|+|++.+-
T Consensus       601 ~~~iDHIiP~s~~~dds~~N~vl~~~~~N~~K~~~tp~e  639 (805)
T TIGR01865       601 YYEIDHILPQSRSFDDSISNKVLVLASENQEKGDQTPYE  639 (805)
T ss_pred             CCceeeecccccCCCCcHHHHHHHhHHHHhhccCCCHHH
Confidence            378999999999999999999999999999999999884

CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.

>COG1403 McrA Restriction endonuclease [Defense mechanisms]

Probab=96.54  E-value=0.0018  Score=55.59  Aligned_cols=53  Identities=23%  Similarity=0.120  Sum_probs=47.1

Q ss_pred             eeecceeeecCCCCcccccchhhhhHhhhcccCCCCcccccccccccccchhh
Q 047330          124 AWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQ  176 (721)
Q Consensus       124 gWEIDHIfP~SRGG~Tv~sNLQiLQWqvNr~KsNKle~lvpWwdLqlg~SvnQ  176 (721)
                      ..++|||+|.+.||.+.-+||++|+..+|..|++++.--.+.+.++.+..+..
T Consensus        81 ~~~~dHiip~~~g~~~~~~Nl~~lc~~c~~~k~~~~~~~~~~~~~~~~~~~~~  133 (146)
T COG1403          81 DLEVDHIVPLSRGGASAWENLETLCERCHNKKGSRLPGKAGMKLRVKPRKPEV  133 (146)
T ss_pred             CCceeeEeecccCCcchHHHHHHHHHhhcccccccchhhccCcccccccCCch
Confidence            78999999999999999999999999999999999988888777777666554

>smart00507 HNHc HNH nucleases

Probab=96.41  E-value=0.0012  Score=47.99  Aligned_cols=29  Identities=34%  Similarity=0.407  Sum_probs=26.8

Q ss_pred             eeecceeeecCCCCcccccchhhhhHhhh
Q 047330          124 AWEIDHWFPCSRGGLTVPSNLRILQWQVC  152 (721)
Q Consensus       124 gWEIDHIfP~SRGG~Tv~sNLQiLQWqvN  152 (721)
                      .|++|||.|.+.||.+.++||++|....|
T Consensus        23 ~~~v~Hi~p~~~~~~~~~~Nl~~~c~~ch   51 (52)
T smart00507       23 GLEVDHIIPLSDGGNDDLDNLVLLCPKCH   51 (52)
T ss_pred             CeEEEecCChhcCCCCChHhCeecChhhC
Confidence            69999999999999999999999987765

>PRK11295 hypothetical protein; Provisional

Probab=90.14  E-value=0.12  Score=48.10  Aligned_cols=37  Identities=16%  Similarity=0.055  Sum_probs=32.8

Q ss_pred             CceeecceeeecCCCCcccccchhhhhHhhhcccCCC
Q 047330          122 PLAWEIDHWFPCSRGGLTVPSNLRILQWQVCKRKHNK  158 (721)
Q Consensus       122 pLgWEIDHIfP~SRGG~Tv~sNLQiLQWqvNr~KsNK  158 (721)
                      ..+..||||.|...|+..+.+|||.|++.+..+|..+
T Consensus        39 ~~a~vVDHIip~~~gd~~D~sNLQ~LC~~CHn~kh~R   75 (113)
T PRK11295         39 LRELTVHHIDHDHDNNPEDGSNWELLCLYCHDHEHSK   75 (113)
T ss_pred             CCCceeeccCCCCCCCCCchhHHHHHhHHHHhHHHhh
Confidence            3578999999999999999999999999998887654

>TIGR02646 conserved hypothetical protein TIGR02646

Probab=82.98  E-value=0.71  Score=42.90  Aligned_cols=38  Identities=24%  Similarity=0.067  Sum_probs=32.4

Q ss_pred             ceeecceeeecCCCCcccc--cchhhhhHh---------hhcccCCCCc
Q 047330          123 LAWEIDHWFPCSRGGLTVP--SNLRILQWQ---------VCKRKHNKPE  160 (721)
Q Consensus       123 LgWEIDHIfP~SRGG~Tv~--sNLQiLQWq---------vNr~KsNKle  160 (721)
                      -.++||||.|.+..+..+.  +||.+.+-.         +|+.|+|+..
T Consensus        37 ~~~~ieH~~Pk~~~~~~~~~~~NL~~sC~~~n~~~~~~~Cn~~K~~~~~   85 (144)
T TIGR02646        37 LGSHIEHFRPKGAYPPLTLDWSNLFGSCHRESKQGNPLHCGRFKDNSCG   85 (144)
T ss_pred             CCcceeeecccCCChhhhcChhhchhhccccCCCCCccccccccccccc
Confidence            4689999999999888776  999999998         8888877744

Members of this uncharacterized protein family are found exclusively in bacteria. Neighboring genes in various genomes are also uncharacterized or may annotated as similar to restriction system proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	721
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	2e-08
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	4e-08
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	7e-08
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-06
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	6e-06
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.9 bits (139), Expect = 1e-08
 Identities = 86/672 (12%), Positives = 181/672 (26%), Gaps = 220/672 (32%)

Query: 5   YAFTEDDMAVDEGLGYP---KAYAKICRDRSASGVG-------LCSHGPPFCFTPYPLQE 54
             F E+ + ++    Y           R  S            L +      F  Y +  
Sbjct: 80  QKFVEEVLRIN----YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV--FAKYNV-- 131

Query: 55  DESSRAKQLEKMFPVIDPKAKPTAKPKIFLSLLWKQLNHLGNAGFDPAVIRVDPYGNVLY 114
              SR +   K+      +A    +P   + +        G  G                
Sbjct: 132 ---SRLQPYLKL-----RQALLELRPAKNVLI------D-GVLGS--------------- 161

Query: 115 YHADSASPLAWEIDHWFPCSRGGLTVPSNLRILQWQVCK--RKHNKPEFVVPWWDLQLG- 171
                                 G T       +   VC   +   K +F + W  L L  
Sbjct: 162 ----------------------GKTW------VALDVCLSYKVQCKMDFKIFW--LNLKN 191

Query: 172 -------ISVNQFLSVFASSNSDFRHRAFSYLFLEGENEEINASQTVESHSFPQHFVESK 224
                  + + Q L      N   R    S + L   + +    + ++S  +        
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE------- 244

Query: 225 RKLGLAPAGIVVSRRELRD--SALTLRSLDYNRQI----RSSSPAIASRKVKPGVLKENE 278
             L      +V     L +  +A    + + + +I    R                    
Sbjct: 245 NCL------LV-----LLNVQNAKAWNAFNLSCKILLTTRFKQVT--------------- 278

Query: 279 TPDFVTNPYQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELEL 338
             DF++      ++           +   + ++ L+    D+ R    E L      L +
Sbjct: 279 --DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR----EVLTTNPRRLSI 332

Query: 339 IKRRRRAEKCR----------QLAEA-QSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVAT 387
           I    R               +L    +SS   +     R    +  ++     +     
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI----P 388

Query: 388 NALMARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRS 447
             L++ +       D  + D+         +  +L        K S     L E++   S
Sbjct: 389 TILLSLI-----WFDVIKSDV-------MVVVNKL-------HKYS-----LVEKQPKES 424

Query: 448 VLYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPK---------LG 498
            + +P       I+ EL+V LE E     + +      +  + ++  P          +G
Sbjct: 425 TISIPS------IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478

Query: 499 INFAKEKHEERDKSIVAFEEYP--------IEDQLKRLEIGEEKRQRLQFPVLREPEIQK 550
            +    +H ER         +         +E +++           +         +Q+
Sbjct: 479 HHLKNIEHPER------MTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL------NTLQQ 526

Query: 551 VEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDIIK-KLDEKYPQK 609
           ++  +  I         ER +  +L+       P+       S+  D+++  L       
Sbjct: 527 LKFYKPYICDN--DPKYERLVNAILDFL-----PKIEENLICSKYTDLLRIAL-----MA 574

Query: 610 DRSSVTQEPEKQ 621
           +  ++ +E  KQ
Sbjct: 575 EDEAIFEEAHKQ 586

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 8e-06
 Identities = 65/556 (11%), Positives = 131/556 (23%), Gaps = 208/556 (37%)

Query: 126 EIDHWFPCSRGGLTVPSN---LRILQWQVCKRKHNKPEFVVPWWDLQLGISVNQFLSVFA 182
           EIDH        +           L W +  ++                  V +F+    
Sbjct: 50  EIDHI-------IMSKDAVSGTLRLFWTLLSKQEE---------------MVQKFVEEVL 87

Query: 183 SSNSDFRHRAFSYLFLEGENEEINASQTVE-----SHSFPQHFVESKRKLGLAPAGIVVS 237
             N  F          +         +  +     +  F ++ V   +            
Sbjct: 88  RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY---------- 137

Query: 238 RRELRDSALTLRSLDYNRQIRSSSPAIASRKV----KPG----VLKENETPDFVTNPYQA 289
             +LR + L LR                   V      G     +              A
Sbjct: 138 -LKLRQALLELRPAKN---------------VLIDGVLGSGKTWV--------------A 167

Query: 290 IVAARD--------------SLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLE 335
           +                   +LK     + +   +QKL  ++     +  +   +I+   
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 336 LELIKRRRRAEKCRQLAEAQSSYRTMLEKMI-RDAMHQSVI--YKEQVR-LNQVATNALM 391
             +    RR  K +        Y   L  ++  +  +      +    + L  + T    
Sbjct: 228 HSIQAELRRLLKSKP-------YENCL--LVLLNVQNAKAWNAFNLSCKIL--LTTR--- 273

Query: 392 ARLEAQKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTL--FEEKDSRSVL 449
                 K + D                   L            +D         + +S+L
Sbjct: 274 -----FKQVTDF------------------LSAAT---TTHISLDHHSMTLTPDEVKSLL 307

Query: 450 YLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEER 509
                                            +  R E +   P +L I  A+   +  
Sbjct: 308 ------------------------LKYLDCRPQDLPR-EVLTTNPRRLSI-IAESIRDGL 341

Query: 510 DKSIVAFEEYP----------IEDQLKRLEIGEEKRQRLQFPVLRE----PEI------- 548
                 ++ +           IE  L  LE  E ++   +  V       P I       
Sbjct: 342 AT----WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 549 QKVEEEEEEIRKE-RGKGNVERW----------LQMLLENTQEETDPQ-------ATNEN 590
             ++ +   +  +      VE+           + + L+   E  +           N  
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN-EYALHRSIVDHYNIP 456

Query: 591 KTSRTDDIIKKLDEKY 606
           KT  +DD+I    ++Y
Sbjct: 457 KTFDSDDLIPPYLDQY 472

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 8e-04
 Identities = 32/181 (17%), Positives = 76/181 (41%), Gaps = 36/181 (19%)

Query: 499 INFAKEKHEERDKSIVA-FEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKV---EEE 554
           ++F   +H+ + K I++ FE+  +++     ++ +  +      +L + EI  +   ++ 
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDN-FDCKDVQDMPK-----SILSKEEIDHIIMSKDA 60

Query: 555 EEEIR------KERGKGNVERWLQMLLE-NTQEETDPQATNENKTSR-TDDIIKKLDEKY 606
                        + +  V+++++ +L  N +    P  T + + S  T   I++ D  Y
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 607 PQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSNVVEQISIVEGV-GSRK 665
                 +  Q   K  +   +   KL + + E+ PA+ V           +++GV GS K
Sbjct: 121 ------NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV-----------LIDGVLGSGK 163

Query: 666 S 666
           +
Sbjct: 164 T 164

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 56.8 bits (137), Expect = 2e-08
 Identities = 55/344 (15%), Positives = 121/344 (35%), Gaps = 51/344 (14%)

Query: 298  KQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSS 357
            ++ + T++ Q + +   +E+        EEK  +Q+      +    AE+ R    A+  
Sbjct: 864  EELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAK-- 921

Query: 358  YRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREE 417
             +  LE+++ +   +    +E+ +  Q     +  ++   +   +  E    K   ++  
Sbjct: 922  -KQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVT 980

Query: 418  IEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEA 477
             + +++   +        ++ L +E+                        LEE       
Sbjct: 981  ADGKIKKMEDDILIMEDQNNKLTKERKL----------------------LEERVSDLTT 1018

Query: 478  GLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQR 537
             L+  EE+             +   K KHE     +    +   +++  R E+ + KR+ 
Sbjct: 1019 NLAEEEEKAKN----------LTKLKNKHESMISELEVRLK---KEEKSRQELEKIKRKL 1065

Query: 538  LQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDD 597
                     +I +++ +  E++ +  K   E  LQ  L   ++ET  +     K    + 
Sbjct: 1066 EGESSDLHEQIAELQAQIAELKAQLAKKEEE--LQAALARLEDETSQKNNALKKIRELES 1123

Query: 598  IIKKLDEKYPQKDRSSVTQEPEKQQIV-VEKEARKLEEEITEIE 640
             I  L E            E EK      EK+ R L EE+  ++
Sbjct: 1124 HISDLQEDL----------ESEKAARNKAEKQKRDLSEELEALK 1157

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 56.0 bits (135), Expect = 4e-08
 Identities = 50/352 (14%), Positives = 128/352 (36%), Gaps = 53/352 (15%)

Query: 299  QREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSY 358
               +  + + E+Q  +EE+   +    + + ++++LE +  +        ++  +A++  
Sbjct: 848  PLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETEL 907

Query: 359  RTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREEI 418
                E+M      +    +E +         + AR+E         E+   +   +++++
Sbjct: 908  YAEAEEMRVRLAAKKQELEEILH-------EMEARIE-------EEEERSQQLQAEKKKM 953

Query: 419  EKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASEAG 478
            ++Q+    E   +       L  EK +                       + + K  E  
Sbjct: 954  QQQMLDLEEQLEEEEAARQKLQLEKVT----------------------ADGKIKKMEDD 991

Query: 479  LSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEKRQRL 538
            +   E++ N+  +E          +E+  +   ++   EE     + K L   + K + +
Sbjct: 992  ILIMEDQNNKLTKE------RKLLEERVSDLTTNLAEEEE-----KAKNLTKLKNKHESM 1040

Query: 539  QFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLLENTQEETDPQATNENKTSRTDDI 598
                + E E++  +EE+     E+ K  +E     L E   E     A  + + ++ ++ 
Sbjct: 1041 ----ISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEE 1096

Query: 599  IKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEEITEIEPAETVTEKSN 650
            ++    +   +D +S      K+   +E     L+E++   + A    EK  
Sbjct: 1097 LQAALARL--EDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQK 1146

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 55.2 bits (133), Expect = 7e-08
 Identities = 42/263 (15%), Positives = 97/263 (36%), Gaps = 21/263 (7%)

Query: 298  KQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSS 357
            ++ E +Q++Q E +K+ +++ D+    +EE+   Q L+LE +    + +K          
Sbjct: 938  EEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMED 997

Query: 358  YRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEKDLHKKFKQREE 417
                L K  +    +       +   +     L       +++    E  L K+ K R+E
Sbjct: 998  QNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQE 1057

Query: 418  IEKQLRP-EREHARKRSRMDDTLFEEKDSRSVLYLPGVKQRTPIHKELRVFLEEEQKASE 476
            +EK  R  E E +    ++ +   +  + ++ L      ++    +     LE+E     
Sbjct: 1058 LEKIKRKLEGESSDLHEQIAELQAQIAELKAQL-----AKKEEELQAALARLEDETSQKN 1112

Query: 477  AGLSSNEE--RRNEEVEEEPPKLGINFAKEKHEERDKSIVAFEEYPIEDQLKRLEIGEEK 534
              L    E      +++E+     +   K    + +K      E  +E     LE   + 
Sbjct: 1113 NALKKIRELESHISDLQED-----LESEKAARNKAEKQKRDLSE-ELEALKTELEDTLDT 1166

Query: 535  RQRLQFPVLREPEIQKVEEEEEE 557
                Q       E++  + ++++
Sbjct: 1167 TATQQ-------ELRGSDYKDDD 1182

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 51.3 bits (123), Expect = 1e-06
 Identities = 41/263 (15%), Positives = 82/263 (31%), Gaps = 18/263 (6%)

Query: 287  YQAIVAARDSLKQREETQKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAE 346
             +  V  +     R+ T  +Q  ++             + + + IQ      + R     
Sbjct: 826  QRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHR 885

Query: 347  KCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEAQKAICDSAEK 406
              + +   Q  YR M+ K     +         V   +     L  ++   +   D   K
Sbjct: 886  TLKAIVYLQCCYRRMMAKRELKKLKIE---ARSVERYKKLHIGLENKIMQLQRKIDEQNK 942

Query: 407  DLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLP-------GVKQRTP 459
            +     ++   +E     E E  R          EE  + +   L          K+   
Sbjct: 943  EYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQ 1002

Query: 460  IHKELRVFLEEEQKASE--AGLSSNEERRNEEVEEEPPKLGINFAKEKHEERDKSIVAFE 517
               E +   E   K       L S  + +N  ++ E  +L       +  ++ K I    
Sbjct: 1003 TQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEEL-----NRRIHDQAKEITETM 1057

Query: 518  EYPIEDQLKRLEIG-EEKRQRLQ 539
            E  + ++ K+LE+   ++R R Q
Sbjct: 1058 EKKLVEETKQLELDLNDERLRYQ 1080

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 49.0 bits (117), Expect = 6e-06
 Identities = 58/331 (17%), Positives = 124/331 (37%), Gaps = 19/331 (5%)

Query: 332  QDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIY-KEQVRLNQVATNAL 390
            Q   LE I+  +    C ++   Q + R  L +     M ++ I  +  VR +Q    A 
Sbjct: 755  QVAYLEKIRADKLRAACIRI---QKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYAT 811

Query: 391  MARLEAQKAICDSAEKDL--HKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSV 448
              R      I    ++     K+++   +    L+        R++    L E K     
Sbjct: 812  FLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQ 871

Query: 449  LYLPGVKQRTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHEE 508
             ++ G   R   H+ L+  +   Q      ++  E ++ +       +      K+ H  
Sbjct: 872  KHVRGWLARVHYHRTLKA-IVYLQCCYRRMMAKRELKKLKIEARSVERY-----KKLHIG 925

Query: 509  RDKSIVAFEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVE 568
             +  I+  +   I++Q K  +   EK   L+  +    E +K+  + E +R    +    
Sbjct: 926  LENKIMQLQRK-IDEQNKEYKSLLEKMNNLE--ITYSTETEKLRSDVERLRMSEEE---A 979

Query: 569  RWLQMLLENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKE 628
            +     + + QEE        ++T      I++  +KY + +   +  E ++Q  +++ E
Sbjct: 980  KNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKY-KHETEQLVSELKEQNTLLKTE 1038

Query: 629  ARKLEEEITEIEPAETVTEKSNVVEQISIVE 659
              +L   I +     T T +  +VE+   +E
Sbjct: 1039 KEELNRRIHDQAKEITETMEKKLVEETKQLE 1069

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 43.6 bits (103), Expect = 3e-04
 Identities = 43/300 (14%), Positives = 101/300 (33%), Gaps = 31/300 (10%)

Query: 337  ELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVATNALMARLEA 396
              ++R R A   ++        +            Q+++    VR            +  
Sbjct: 811  TFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIII 870

Query: 397  QKAICDSAEKDLHKKFKQREEIEKQLRPEREHARKRSRMDDTLFEEKDSRSVLYLPGVKQ 456
            QK +     +  + +   +  +  Q    R  A++  +    L  E  S           
Sbjct: 871  QKHVRGWLARVHYHR-TLKAIVYLQCCYRRMMAKRELK---KLKIEARSVERY------- 919

Query: 457  RTPIHKELRVFLEEEQKASEAGLSSNEERRNEEVEEEPPKLGINFAKEKHE-ERDKSIVA 515
                 K+L + LE +    +  +   + +  + + E+   L I ++ E  +   D   + 
Sbjct: 920  -----KKLHIGLENKIMQLQRKIDE-QNKEYKSLLEKMNNLEITYSTETEKLRSDVERLR 973

Query: 516  FEEYPIEDQLKRLEIGEEKRQRLQFPVLREPEIQKVEEEEEEIRKERGKGNVERWLQMLL 575
              E   ++   R+   +E+  +L+  + +    +K  EE  +  K   +       Q++ 
Sbjct: 974  MSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETE-------QLVS 1026

Query: 576  ENTQEETDPQATNENKTSRTDDIIKKLDEKYPQKDRSSVTQEPEKQQIVVEKEARKLEEE 635
            E  ++ T  +   E    R  D  K++ E   +K         E +Q+ ++    +L  +
Sbjct: 1027 ELKEQNTLLKTEKEELNRRIHDQAKEITETMEKK------LVEETKQLELDLNDERLRYQ 1080

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	721
2qgp_A	112	HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, stru	97.94
3na7_A	256	HP0958; flagellar biogenesis, flagellum export, C4	83.91
3oja_B	597	Anopheles plasmodium-responsive leucine-rich REPE	82.67

>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}

Probab=83.91  E-value=13  Score=36.03  Aligned_cols=93  Identities=10%  Similarity=0.159  Sum_probs=54.0

Q ss_pred             HHHHHHhHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhchhhHHHHhhhHHH
Q 047330          307 QMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLNQVA  386 (721)
Q Consensus       307 q~e~~~l~~e~~~~k~~n~~er~~iq~le~~likrrrr~ekcrrlaeaqssyr~~lekmirdamhqsv~ykeq~rlnqaa  386 (721)
                      .+++..|++++..++..-..-+..|.+++..+.+..                     ..|.++-..---|++|  |+++.
T Consensus        31 p~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e---------------------~~i~~~~~ri~~~~~~--l~~v~   87 (256)
T 3na7_A           31 RKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNE---------------------QTLQDTNAKIASIQKK--MSEIK   87 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHH--HHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHH--HHccC
Confidence            455555555555555555555555555544444333                     3333333333334433  23333


Q ss_pred             ----HHHHHHHHHHHHHhhhhhHHHHHHhhcchHHHHHhh
Q 047330          387 ----TNALMARLEAQKAICDSAEKDLHKKFKQREEIEKQL  422 (721)
Q Consensus       387 ----~~almarleaq~a~cd~se~~l~kky~~rd~le~qi  422 (721)
                          -+||+..++.++.--...|+++..-....+.++..+
T Consensus        88 ~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l  127 (256)
T 3na7_A           88 SERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQ  127 (256)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                358888888888888888888888777777776654

>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=82.67  E-value=6  Score=40.94  Aligned_cols=112  Identities=16%  Similarity=0.199  Sum_probs=53.8

Q ss_pred             HHHHHHHHHhHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhchhhHHHHhhh
Q 047330          304 QKMQMEIQKLNEEVTDMRRANDEEKLDIQDLELELIKRRRRAEKCRQLAEAQSSYRTMLEKMIRDAMHQSVIYKEQVRLN  383 (721)
Q Consensus       304 ~~~q~e~~~l~~e~~~~k~~n~~er~~iq~le~~likrrrr~ekcrrlaeaqssyr~~lekmirdamhqsv~ykeq~rln  383 (721)
                      .++++++..++.+++.++.+......+++.++..+.++|...+   ...+....-+.+|++++....-.--....+..--
T Consensus       452 e~l~~e~~~~~~~i~~l~~~~~~~~~~l~~~~~~i~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  528 (597)
T 3oja_B          452 EQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYR---LPKDGLARSSDNLNKVFTHLKERQAFKLRETQAR  528 (597)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcC---ccccccCCHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence            3567788888888888887776666666666666665553322   0000111222455555543322111111112222


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHHHhhcchHHH
Q 047330          384 QVATNALMARLEAQKAICDSAEKDLHKKFKQREEI  418 (721)
Q Consensus       384 qaa~~almarleaq~a~cd~se~~l~kky~~rd~l  418 (721)
                      +.+.++.|+-++..+.-++.-|+.+....++..+|
T Consensus       529 ~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l  563 (597)
T 3oja_B          529 RTEADAKQKETEDLEQENIALEKQLDNKRAKQAEL  563 (597)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHH
Confidence            33344455555544444445555554444444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00