Citrus Sinensis ID: 047435

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720----
GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAVLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPYNAQKLRLIREDSTYRIMHAAEKQFRSSDVPFTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQGRTTNLQNFDMNIQAHAPCTVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVIEDEQSEYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQCGIGSVTISEANKIIMQYPKKVMEKFVQMHN
ccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHHcEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHccccccccEEEEEEEEEccccccccccccHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHcccccccEEEEEEcccccccccccccccEEEEEEEcccccHHHHHHHHHHHHccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccHHHHHHHHHHHcccccEEEEccccccccHHHHHHccccccccccHHHHHHHcccccccccEEEEEEEcccccccccccccccccccccccccccccc
ccEEEccHHHcccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHEEEEEHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccccHHHcccEEEccccccccEEEEEEEccccccHHHHHHHHHHcccccccEEEEEEEEEEcccccccEEEEcccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHHHHHHHccccEEEEEEEcccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHccHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEccccccccHHHccHcHHHcccccccHHHccccccccccEEEEEEEEEccccccccccccccccccccccccccccc
ggivlgpsvlsrnkiimdtifprrEMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRIlsdytpgvergLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMAEAVFNkslghkaesSLCLIGLLFFSFLVVRPAVLLVvnrtpegkpvkegYVIGLMILPIAMGALTDMLGVSFALGALIVGLivpagpplgsalvEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIIciyhkpqtrckvtedkqmrtlqttpisselrifcgvhfeGNIRSIVALLKacnpcetspmcVYLVHLIELVgraspvlapynaqKLRLIREDSTYRIMHAAEkqfrssdvpftilpykmiapydtMHESICELVKekfiplvvlpfnkkrqgrttnlqnfdmniqahapctvgllvdkssttghfysiGHFTYSLVVLFLGGADDREALALVSRmsghpglsiTVFRITViedeqseydcerhLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQCGIGSVTISEANKIIMQYPKKVMEKFVQMHN
ggivlgpsvlsrnkiimdtifprREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAVLLvvnrtpegkpvkegYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQTRCKVTEDKQMRtlqttpisselrIFCGVHFEGNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPYNAQKLRLIREDSTYRIMHAaekqfrssdvpfTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQGRTTNLQNFDMNIQAHAPCTVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSrmsghpglsiTVFRITVIEDEQSEYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIrrmdgyynlvivgkkravtsrLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQCGIGSVTISEANKIIMQYPKKVMEKFVQMHN
GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQlamsssmlaellGWIALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAVLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPYNAQKLRLIREDSTYRIMHAAEKQFRSSDVPFTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQGRTTNLQNFDMNIQAHAPCTVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVIEDEQSEYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQCGIGSVTISEANKIIMQYPKKVMEKFVQMHN
***VLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAVLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPYNAQKLRLIREDSTYRIMHAAEKQFRSSDVPFTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQGRTTNLQNFDMNIQAHAPCTVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVIEDEQSEYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQCGIGSVTISEANKIIMQYPKKVM********
GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAVLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQ***********************RIFCGVHFEGNIRSIVALLKA*******PMCVYLVHLIELVG*************************MHAAEKQFRSSDVPFTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKR*****NLQNFDMNIQAHAPCTVGLLVDKSST*********FTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVI***************IAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRA************VEYEELGVIGDTLASVDFCKGMTSVLVIQCGI****************************
GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAVLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPYNAQKLRLIREDSTYRIMHAAEKQFRSSDVPFTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQGRTTNLQNFDMNIQAHAPCTVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVIEDEQSEYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQCGIGSVTISEANKIIMQYPKKVMEKFVQMHN
GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAVLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPYNAQKLRLIREDSTYRIMHAAEKQFRSSDVPFTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQGRTTNLQNFDMNIQAHAPCTVGLLVDKSSTTGH**SIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVIEDEQSEYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQCGIGS**************************
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAVLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPYNAQKLRLIREDSTYRIMHAAEKQFRSSDVPFTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQGRTTNLQNFDMNIQAHAPCTVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVIEDEQSEYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQCGIGSVTISEANKIIMQYPKKVMEKFVQMHN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query724 2.2.26 [Sep-21-2011]
Q9SIT5821 Cation/H(+) antiporter 15 yes no 0.972 0.857 0.324 1e-112
Q9FFR9810 Cation/H(+) antiporter 18 no no 0.930 0.832 0.302 6e-80
Q9LUN4800 Cation/H(+) antiporter 19 no no 0.935 0.846 0.286 6e-80
Q9SUQ7820 Cation/H(+) antiporter 17 no no 0.943 0.832 0.297 4e-79
Q9FGH6857 Cation/H(+) antiporter 25 no no 0.932 0.787 0.281 2e-76
Q1HDT2859 Cation/H(+) antiporter 24 no no 0.940 0.792 0.276 4e-76
Q8VYD4867 Cation/H(+) antiporter 23 no no 0.946 0.790 0.279 1e-71
Q9SKA9832 Cation/H(+) antiporter 21 no no 0.928 0.807 0.282 1e-70
Q1HDT3811 Cation/H(+) antiporter 16 no no 0.922 0.823 0.284 3e-66
Q9M353842 Cation/H(+) antiporter 20 no no 0.936 0.805 0.265 7e-65
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function desciption
 Score =  406 bits (1043), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/743 (32%), Positives = 400/743 (53%), Gaps = 39/743 (5%)

Query: 1   GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHT 60
           GGIVLGPSVL R+     TIFP+R +MV+ T++ +  +YF+F++ V+MD + + +  K  
Sbjct: 72  GGIVLGPSVLGRSTKFAHTIFPQRSVMVLETMANVGLLYFLFLVGVEMDIMVVRKTGKRA 131

Query: 61  WFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLL 120
             I I  +V+P++I    S  +      + +G + L+    LS+T F  +A  ++ELKL+
Sbjct: 132 LTIAIGGMVLPFLIGAAFSFSMHRSEDHLGQGTYILFLGVALSVTAFPVLARILAELKLI 191

Query: 121 TSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLIGLLFF---SFLVVRPA 177
            +E+G+++MS++++ ++  WI L       +S      S   +I    F      VVRP 
Sbjct: 192 NTEIGRISMSAALVNDMFAWILLALAIALAESDKTSFASLWVMISSAVFIAVCVFVVRPG 251

Query: 178 VLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSA 237
           +  ++ +TPEG+   E ++  ++   +  G +TD +G     GA + GL++P G PLG  
Sbjct: 252 IAWIIRKTPEGENFSEFHICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNG-PLGLT 310

Query: 238 LVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLF 297
           L+EK +  +S +LLP F+   GL TN+ +I+   ++  L  ++  A  GK++G++    F
Sbjct: 311 LIEKLEDFVSGLLLPLFFAISGLKTNIAAIQGPATWLTLFLVIFLACAGKVIGTVIVAFF 370

Query: 298 FGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIIC 357
            G  +R GI    +LN KG+ E ++LN  + + K +D+ ++ATMVL  L +  ++TPI+ 
Sbjct: 371 HGMPVREGITLGLLLNTKGLVEMIVLNVGK-DQKVLDDETFATMVLVALVMTGVITPIVT 429

Query: 358 IYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPMC 417
           I +KP    K +   + RT+Q T   SELR+   VH   N+ +I+ LL+A +P + SP+C
Sbjct: 430 ILYKP---VKKSVSYKRRTIQQTKPDSELRVLVCVHTPRNVPTIINLLEASHPTKRSPIC 486

Query: 418 VYLVHLIELVGRASPVLAPYNAQKL---RLIREDSTYRIMHAAEKQFRSSDVPFTILPYK 474
           +Y++HL+EL GRAS +L  +N +K     L R  +    +  A + +        + P  
Sbjct: 487 IYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHAAFVAVQPLT 546

Query: 475 MIAPYDTMHESICELVKEKFIPLVVLPFNKKR------QGRTTNLQNFDMNIQAHAPCTV 528
            I+PY TMHE +C L ++K +  +++PF+K++      +      +  + N+  ++PC+V
Sbjct: 547 AISPYSTMHEDVCSLAEDKRVSFIIIPFHKQQTVDGGMESTNPAYRLVNQNLLENSPCSV 606

Query: 529 GLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVIE 588
           G+LVD+        +    +  + VLF GG DDREALA   RM+ HPG+++TV R    E
Sbjct: 607 GILVDRGLNGATRLNSNTVSLQVAVLFFGGPDDREALAYAWRMAQHPGITLTVLRFIHDE 666

Query: 589 DEQS-----------------EYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEV 631
           DE                   ++  +R LD+  IN F   N     +   + +  N  E 
Sbjct: 667 DEADTASTRATNDSDLKIPKMDHRKQRQLDDDYINLFRAENAEYESIVYIEKLVSNGEET 726

Query: 632 IDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLV 691
           +  +R MD  ++L IVG+   ++S L   +  W E  ELG IGD LAS DF     SVLV
Sbjct: 727 VAAVRSMDSSHDLFIVGRGEGMSSPLTAGLTDWSECPELGAIGDLLASSDFA-ATVSVLV 785

Query: 692 IQCGIGSVTISEANKIIMQYPKK 714
           +Q  +G    S A +  M +P+ 
Sbjct: 786 VQQYVG----SWAQEDDMDFPES 804
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description
>sp|Q9LUN4|CHX19_ARATH Cation/H(+) antiporter 19 OS=Arabidopsis thaliana GN=CHX19 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUQ7|CHX17_ARATH Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1 Back     alignment and function description
>sp|Q9FGH6|CHX25_ARATH Cation/H(+) antiporter 25 OS=Arabidopsis thaliana GN=CHX25 PE=2 SV=1 Back     alignment and function description
>sp|Q1HDT2|CHX24_ARATH Cation/H(+) antiporter 24 OS=Arabidopsis thaliana GN=CHX24 PE=2 SV=2 Back     alignment and function description
>sp|Q8VYD4|CHX23_ARATH Cation/H(+) antiporter 23, chloroplastic OS=Arabidopsis thaliana GN=CHX23 PE=1 SV=1 Back     alignment and function description
>sp|Q9SKA9|CHX21_ARATH Cation/H(+) antiporter 21 OS=Arabidopsis thaliana GN=CHX21 PE=2 SV=2 Back     alignment and function description
>sp|Q1HDT3|CHX16_ARATH Cation/H(+) antiporter 16 OS=Arabidopsis thaliana GN=CHX16 PE=2 SV=1 Back     alignment and function description
>sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20 OS=Arabidopsis thaliana GN=CHX20 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query724
255576723789 K(+)/H(+) antiporter, putative [Ricinus 0.951 0.873 0.384 1e-138
255559551 1512 monovalent cation:proton antiporter, put 0.940 0.450 0.378 1e-134
357432837 871 monovalent cation H+ exchanger 23 [Glyci 0.986 0.819 0.344 1e-125
356569280 1584 PREDICTED: uncharacterized protein LOC10 0.964 0.440 0.349 1e-125
357461421 827 Cation proton exchanger [Medicago trunca 0.961 0.841 0.331 1e-124
357461423821 K(+)/H(+) antiporter [Medicago truncatul 0.946 0.834 0.332 1e-120
255559563746 monovalent cation:proton antiporter, put 0.901 0.875 0.338 1e-114
224096008769 cation proton exchanger [Populus trichoc 0.943 0.888 0.336 1e-114
255550512 834 Na(+)/H(+) antiporter, putative [Ricinus 0.947 0.822 0.331 1e-111
357519983 831 Cation proton exchanger [Medicago trunca 0.957 0.833 0.333 1e-111
>gi|255576723|ref|XP_002529249.1| K(+)/H(+) antiporter, putative [Ricinus communis] gi|223531285|gb|EEF33127.1| K(+)/H(+) antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 276/718 (38%), Positives = 426/718 (59%), Gaps = 29/718 (4%)

Query: 1   GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHT 60
            GI+LGPSVL RNK  M+T FP +EM++ NT++ L   Y IFII+VKMD   +L +AK  
Sbjct: 82  AGIILGPSVLGRNKAFMETFFPPKEMLIFNTVARLGTAYLIFIIAVKMDVKTLLSSAKKI 141

Query: 61  WFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYF-TSLLSMTYFSTVADAVSELKL 119
           W I +   + P++I +  S  +        +G+  + F    +S+TYF  VA  + EL L
Sbjct: 142 WPIGLCSYIFPFVITLIFSSAMYKELSACLKGMNMVTFLCGAISVTYFPVVAQFIEELDL 201

Query: 120 LTSELGQLAMSSSMLAELLGW-IALMAEAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAV 178
           LT+ELGQLA+SSSML ++    I ++  AV   S  H     L +   +  +  V+RPA+
Sbjct: 202 LTTELGQLALSSSMLIQMTSHAITIIGVAVTRDSYIHSIYYFLAICATIILAVYVIRPAI 261

Query: 179 LLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSAL 238
           LL +  TPEGKP+KE YVI ++I  + M  +TD++   F  GAL+ GLI+P GPPLG+ L
Sbjct: 262 LLSIKITPEGKPIKEVYVIAILIGTLIMAVITDVMWYDFLSGALLTGLIIPDGPPLGAIL 321

Query: 239 VEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFF 298
           VEK + ++  I LP F++++G LT+V S++N K+   +  ++    + K++G+L   L+ 
Sbjct: 322 VEKSELMVMEIFLPLFFVQVGYLTDVSSLQNIKAVTVVLLLVTVCCLTKIIGTLLASLYL 381

Query: 299 GTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICI 358
               +  +    ILN KG+ +    +R +     +++  Y  +VL +L V AI  P+I  
Sbjct: 382 NIKFQTALFLGLILNFKGVVDLTTFHRFQSR-NILEKRCYTALVLFNLLVVAIFYPLIEF 440

Query: 359 YHKPQTRC--KVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPM 416
           ++KP+ R   + ++ K  R LQ+TP + ELR    ++ E N+  ++ALL A N    SP+
Sbjct: 441 FYKPRIRLAGRYSKTKYSRALQSTPQAEELRALTCIYHENNVPGMIALLDASNHRAISPL 500

Query: 417 CVYLVHLIELVGRASPVLAPYNAQKLRLIRED---STYRIMHAAEKQFRSSDVPFTILPY 473
           C Y+VH+++LVGR +P L PY   K R+   D   S+ RIM A     +++    ++ P+
Sbjct: 501 CAYVVHVVDLVGRTAPSLLPYKG-KTRMSNHDPCSSSSRIMSAFINYSKTASGRVSLQPF 559

Query: 474 KMIAPYDTMHESICELVKEKFIPLVVLPF--------NKKRQGRTTNLQNFDMNIQAHAP 525
            M+AP+ TMH  IC L +E  IP +++PF        N K++G    LQ+F+  +QAHAP
Sbjct: 560 TMVAPFRTMHNIICNLAEENLIPFIIVPFHENQILDLNSKQKGV---LQDFNSQLQAHAP 616

Query: 526 CTVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRIT 585
           CTVG+L D+                +VV+F+GGADDREALAL  RMSG+P ++IT+ RI 
Sbjct: 617 CTVGILYDRGLQPRLNKC------RIVVVFIGGADDREALALAIRMSGNPDMNITMLRIN 670

Query: 586 VIEDEQSEYDCERHLDEIAINEFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLV 645
             +D+      E  LDE+ + EFI NN++N  + C+QV   ++ ++++ ++ +   Y+LV
Sbjct: 671 SAKDKDRSI-TEAQLDELLVKEFIDNNLNNPRILCQQVSVNDSLQMLNAVQSLRRNYDLV 729

Query: 646 IVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGMTSVLVIQ-CGIGSVTIS 702
           +VGK     +  E+++  WVEY ELGVIGD LAS DF   MTSVLV++ C + + + S
Sbjct: 730 MVGKNSGARA-FEKDLTEWVEYAELGVIGDMLASTDFYNEMTSVLVMEHCAVVNKSFS 786

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255559551|ref|XP_002520795.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223539926|gb|EEF41504.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357432837|gb|AET79251.1| monovalent cation H+ exchanger 23 [Glycine max] Back     alignment and taxonomy information
>gi|356569280|ref|XP_003552831.1| PREDICTED: uncharacterized protein LOC100781310 [Glycine max] Back     alignment and taxonomy information
>gi|357461421|ref|XP_003600992.1| Cation proton exchanger [Medicago truncatula] gi|355490040|gb|AES71243.1| Cation proton exchanger [Medicago truncatula] Back     alignment and taxonomy information
>gi|357461423|ref|XP_003600993.1| K(+)/H(+) antiporter [Medicago truncatula] gi|355490041|gb|AES71244.1| K(+)/H(+) antiporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|255559563|ref|XP_002520801.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223539932|gb|EEF41510.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224096008|ref|XP_002310518.1| cation proton exchanger [Populus trichocarpa] gi|222853421|gb|EEE90968.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255550512|ref|XP_002516306.1| Na(+)/H(+) antiporter, putative [Ricinus communis] gi|223544536|gb|EEF46053.1| Na(+)/H(+) antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357519983|ref|XP_003630280.1| Cation proton exchanger [Medicago truncatula] gi|355524302|gb|AET04756.1| Cation proton exchanger [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query724
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.805 0.710 0.336 7.3e-105
TAIR|locus:2090462800 CHX19 "cation/H+ exchanger 19" 0.937 0.848 0.302 4.4e-84
TAIR|locus:2128484820 CHX17 "cation/H+ exchanger 17" 0.802 0.708 0.305 1.5e-79
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.856 0.765 0.310 6.8e-79
TAIR|locus:2084370842 CHX20 "cation/H+ exchanger 20" 0.691 0.595 0.276 8.1e-76
TAIR|locus:2171238857 CHX25 "cation/H+ exchanger 25" 0.732 0.618 0.255 6.5e-68
TAIR|locus:2166168859 CHX24 "cation/H+ exchanger 24" 0.687 0.579 0.263 5e-66
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.976 0.850 0.275 1.2e-65
TAIR|locus:2172631822 CHX3 "cation/H+ exchanger 3" [ 0.715 0.630 0.293 1.3e-63
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.704 0.624 0.299 3.3e-63
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 903 (322.9 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
 Identities = 203/604 (33%), Positives = 339/604 (56%)

Query:     1 GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHT 60
             GGIVLGPSVL R+     TIFP+R +MV+ T++ +  +YF+F++ V+MD + + +  K  
Sbjct:    72 GGIVLGPSVLGRSTKFAHTIFPQRSVMVLETMANVGLLYFLFLVGVEMDIMVVRKTGKRA 131

Query:    61 WFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLL 120
               I I  +V+P++I    S  +      + +G + L+    LS+T F  +A  ++ELKL+
Sbjct:   132 LTIAIGGMVLPFLIGAAFSFSMHRSEDHLGQGTYILFLGVALSVTAFPVLARILAELKLI 191

Query:   121 TSELGQXXXXXXXXXXXXGWIAL-MAEAVFNKSLGHKAESSLCLIGLLFFSF--LVVRPA 177
              +E+G+             WI L +A A+        A   + +   +F +    VVRP 
Sbjct:   192 NTEIGRISMSAALVNDMFAWILLALAIALAESDKTSFASLWVMISSAVFIAVCVFVVRPG 251

Query:   178 VLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLGSA 237
             +  ++ +TPEG+   E ++  ++   +  G +TD +G     GA + GL++P GP LG  
Sbjct:   252 IAWIIRKTPEGENFSEFHICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGP-LGLT 310

Query:   238 LVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLF 297
             L+EK +  +S +LLP F+   GL TN+ +I+   ++  L  ++  A  GK++G++    F
Sbjct:   311 LIEKLEDFVSGLLLPLFFAISGLKTNIAAIQGPATWLTLFLVIFLACAGKVIGTVIVAFF 370

Query:   298 FGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIIC 357
              G  +R GI    +LN KG+ E ++LN +  + K +D+ ++ATMVL  L +  ++TPI+ 
Sbjct:   371 HGMPVREGITLGLLLNTKGLVEMIVLN-VGKDQKVLDDETFATMVLVALVMTGVITPIVT 429

Query:   358 IYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCETSPMC 417
             I +KP    K +   + RT+Q T   SELR+   VH   N+ +I+ LL+A +P + SP+C
Sbjct:   430 ILYKP---VKKSVSYKRRTIQQTKPDSELRVLVCVHTPRNVPTIINLLEASHPTKRSPIC 486

Query:   418 VYLVHLIELVGRASPVLAPYNAQK-----LRLIREDSTYRIMHAAEKQFRSSDVPFTILP 472
             +Y++HL+EL GRAS +L  +N +K     L   +  S + I++A E  +        + P
Sbjct:   487 IYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDH-IINAFEN-YEQHAAFVAVQP 544

Query:   473 YKMIAPYDTMHESICELVKEKFIPLVVLPFNKKR--QG--RTTN--LQNFDMNIQAHAPC 526
                I+PY TMHE +C L ++K +  +++PF+K++   G   +TN   +  + N+  ++PC
Sbjct:   545 LTAISPYSTMHEDVCSLAEDKRVSFIIIPFHKQQTVDGGMESTNPAYRLVNQNLLENSPC 604

Query:   527 TVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITV 586
             +VG+LVD+        +    +  + VLF GG DDREALA   RM+ HPG+++TV R   
Sbjct:   605 SVGILVDRGLNGATRLNSNTVSLQVAVLFFGGPDDREALAYAWRMAQHPGITLTVLRFIH 664

Query:   587 IEDE 590
              EDE
Sbjct:   665 DEDE 668
GO:0006812 "cation transport" evidence=IEA;IC
GO:0009507 "chloroplast" evidence=ISM
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006885 "regulation of pH" evidence=IMP
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128484 CHX17 "cation/H+ exchanger 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084370 CHX20 "cation/H+ exchanger 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171238 CHX25 "cation/H+ exchanger 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166168 CHX24 "cation/H+ exchanger 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SIT5CHX15_ARATHNo assigned EC number0.32430.97230.8574yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.VII.1472.1
cation proton exchanger (769 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query724
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-141
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 4e-24
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 1e-22
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 9e-13
COG4651408 COG4651, RosB, Kef-type K+ transport system, predi 0.003
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  433 bits (1116), Expect = e-141
 Identities = 254/735 (34%), Positives = 414/735 (56%), Gaps = 49/735 (6%)

Query: 1   GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHT 60
           GG++LGPSVL ++++  +TIFP R +MV+ T++ L  +YF+F++ V+MD   I R  K  
Sbjct: 76  GGVILGPSVLGQSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKA 135

Query: 61  WFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTSLLSMTYFSTVADAVSELKLL 120
             I IA + +P+ I +  S I    +  V +G F L+    LS+T F  +A  ++E+KL+
Sbjct: 136 LAIAIAGMALPFCIGLAFSFIFHQVSRNVHQGTFILFLGVALSVTAFPVLARILAEIKLI 195

Query: 121 TSELGQLAMSSSMLAELLGWIALMAEAVFNKSLGHKAESSLCLI--GLLF--FSFLVVRP 176
            +ELG++AMS++++ ++  WI L+A A+        + +SL ++   + F  F F VVRP
Sbjct: 196 NTELGRIAMSAALVNDMCAWI-LLALAIALAENDSTSLASLWVLLSSVAFVLFCFYVVRP 254

Query: 177 AVLLVVNRTPEGKPVKEGYV----IGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGP 232
            +  ++ RTPEG+   E Y+     G+MI     G +TD +G     GA + GL++P G 
Sbjct: 255 GIWWIIRRTPEGETFSEFYICLILTGVMI----SGFITDAIGTHSVFGAFVFGLVIPNG- 309

Query: 233 PLGSALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSL 292
           PLG  L+EK +  +S +LLP F+   GL TNV  I+   ++  L  +++ A  GK++G++
Sbjct: 310 PLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTI 369

Query: 293 CTVLFFGTSLRFGILFSFILNVKGINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIV 352
               F+    R GI   F++N KG+ E ++LN  R + + +D+ S+A MVL  +A+ A++
Sbjct: 370 IIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGR-DQEVLDDESFAVMVLVAVAMTALI 428

Query: 353 TPIICIYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFEGNIRSIVALLKACNPCE 412
           TP++ + ++P  R       + RT+Q +   +ELR+   VH   N+ +I+ LL+A +P +
Sbjct: 429 TPVVTVVYRPARR---LVGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTK 485

Query: 413 TSPMCVYLVHLIELVGRASPVLAPYNAQKLRLIREDSTY----RIMHAAEKQFRSSDVPF 468
            SP+C+Y++HL+EL GRAS +L  +N +K      + T      I++A E   + +    
Sbjct: 486 RSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCV 544

Query: 469 TILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKR------QGRTTNLQNFDMNIQA 522
           ++ P   I+PY TMHE +C L ++K + L+++PF+K++      +      +  + N+ A
Sbjct: 545 SVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLA 604

Query: 523 HAPCTVGLLVDKSSTTGHFYSIGHFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVF 582
           +APC+VG+LVD+  +     +    ++ + VLF GG DDREALA   RMS HPG+++TV 
Sbjct: 605 NAPCSVGILVDRGLSGATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVM 664

Query: 583 RITVIEDE-------------------QSEYDCERHLDEIAINEFITNNISNACVACRQV 623
           R    ED                    +++   ER LDE  INEF   N  N  +   + 
Sbjct: 665 RFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTEK 724

Query: 624 IAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFC 683
           +  N  E +  IR MD  ++L IVG+ + + S L   +  W E  ELG IGD LAS DF 
Sbjct: 725 VVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFA 784

Query: 684 KGMTSVLVIQCGIGS 698
               SVLV+Q  +G+
Sbjct: 785 A-TVSVLVVQQYVGT 798

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>gnl|CDD|226998 COG4651, RosB, Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 724
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 99.96
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.9
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.87
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.79
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.76
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.74
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.74
PRK11175305 universal stress protein UspE; Provisional 99.64
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.56
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.52
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.4
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.19
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 99.12
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 99.08
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 99.07
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 99.04
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.01
PRK15456142 universal stress protein UspG; Provisional 98.99
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.98
cd01987124 USP_OKCHK USP domain is located between the N-term 98.93
PRK09982142 universal stress protein UspD; Provisional 98.89
PRK15005144 universal stress protein F; Provisional 98.86
PRK15118144 universal stress global response regulator UspA; P 98.85
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.84
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.78
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.77
PRK10116142 universal stress protein UspC; Provisional 98.68
cd00293130 USP_Like Usp: Universal stress protein family. The 98.63
PRK11175305 universal stress protein UspE; Provisional 98.48
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.25
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.19
PRK09982142 universal stress protein UspD; Provisional 98.11
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.11
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 98.1
PRK15005144 universal stress protein F; Provisional 98.07
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.95
COG0589154 UspA Universal stress protein UspA and related nuc 97.89
cd00293130 USP_Like Usp: Universal stress protein family. The 97.85
PRK15118144 universal stress global response regulator UspA; P 97.76
PRK15456142 universal stress protein UspG; Provisional 97.75
PRK10116142 universal stress protein UspC; Provisional 97.74
cd01987124 USP_OKCHK USP domain is located between the N-term 97.7
PRK12652357 putative monovalent cation/H+ antiporter subunit E 97.37
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 97.34
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 97.3
COG0385319 Predicted Na+-dependent transporter [General funct 97.15
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 96.86
PRK10490 895 sensor protein KdpD; Provisional 96.48
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 96.41
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.41
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 96.41
PRK03562621 glutathione-regulated potassium-efflux system prot 96.31
TIGR00841286 bass bile acid transporter. Functionally character 96.24
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 96.23
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 96.16
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 96.13
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 96.1
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 95.91
PRK10669558 putative cation:proton antiport protein; Provision 95.89
PRK03659601 glutathione-regulated potassium-efflux system prot 95.81
PRK05326562 potassium/proton antiporter; Reviewed 95.75
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 95.66
COG0589154 UspA Universal stress protein UspA and related nuc 95.6
COG0475397 KefB Kef-type K+ transport systems, membrane compo 95.33
COG2855334 Predicted membrane protein [Function unknown] 94.91
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 94.9
TIGR00698335 conserved hypothetical integral membrane protein. 94.8
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 94.64
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 94.58
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 94.03
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 93.78
PLN03159 832 cation/H(+) antiporter 15; Provisional 93.69
TIGR00832328 acr3 arsenical-resistance protein. The first prote 93.67
TIGR00930953 2a30 K-Cl cotransporter. 93.47
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 93.46
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 93.25
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 93.04
PF03956191 DUF340: Membrane protein of unknown function (DUF3 92.86
COG3180352 AbrB Putative ammonia monooxygenase [General funct 92.6
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 92.27
TIGR00698335 conserved hypothetical integral membrane protein. 91.93
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 91.47
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 90.8
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 89.86
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 89.25
PRK04288232 antiholin-like protein LrgB; Provisional 88.67
PRK10490 895 sensor protein KdpD; Provisional 88.35
PRK15475433 oxaloacetate decarboxylase subunit beta; Provision 88.16
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 88.07
PRK15476433 oxaloacetate decarboxylase subunit beta; Provision 87.91
PRK15477433 oxaloacetate decarboxylase subunit beta; Provision 87.91
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 85.95
COG3329372 Predicted permease [General function prediction on 85.33
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 85.28
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 84.91
COG3493438 CitS Na+/citrate symporter [Energy production and 83.54
COG1883375 OadB Na+-transporting methylmalonyl-CoA/oxaloaceta 83.47
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 83.42
PRK10711231 hypothetical protein; Provisional 82.34
TIGR01109354 Na_pump_decarbB sodium ion-translocating decarboxy 81.96
TIGR00659226 conserved hypothetical protein TIGR00659. Members 81.85
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-140  Score=1243.98  Aligned_cols=688  Identities=36%  Similarity=0.621  Sum_probs=624.2

Q ss_pred             CeEEEcccccCCcccccccccCccchHHHHHHHHHHHHHHHHHHhhccChHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 047435            1 GGIVLGPSVLSRNKIIMDTIFPRREMMVINTLSTLSGVYFIFIISVKMDTVKILRAAKHTWFITIACLVIPYMIAMFLSR   80 (724)
Q Consensus         1 aGiiLGPs~Lg~~~~~~~~~f~~~~~~~l~~l~~iGl~~~lF~~Gle~d~~~l~~~~k~~~~i~~~~~lip~~~g~~~~~   80 (724)
                      ||++|||++||+++.+.+.+||.++.+.+++++++|++|+||++|+|+|++.+||++|+++.+|+.++++||++|+++++
T Consensus        76 aGIlLGPs~lg~i~~~~~~~fp~~~~~~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~  155 (832)
T PLN03159         76 GGVILGPSVLGQSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSF  155 (832)
T ss_pred             HHHhcCHhhhCcChhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999998899999999888899999999999999999999999999999999999999999999999998888


Q ss_pred             HhhhcCCCc--chhHHHHHhhhhhccccHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHH-H-HhccCC-chh
Q 047435           81 ILSDYTPGV--ERGLFRLYFTSLLSMTYFSTVADAVSELKLLTSELGQLAMSSSMLAELLGWIALMA-E-AVFNKS-LGH  155 (724)
Q Consensus        81 ~l~~~~~~~--~~~~l~l~~~~~~s~Ts~~vv~~iL~el~ll~s~~G~lals~a~i~D~~~~ill~i-~-~~~~~~-~~~  155 (724)
                      +++......  ....+++  |+++|.||+|+++++|+|+|+++++.||+++++++++|+++|+++++ . ....+. ...
T Consensus       156 ~l~~~~~~~~~~~~~l~~--g~alS~Ts~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~~~~~~  233 (832)
T PLN03159        156 IFHQVSRNVHQGTFILFL--GVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLA  233 (832)
T ss_pred             HHhhcccccchhHHHHHH--HHHHHHhhHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Confidence            774321111  1334555  99999999999999999999999999999999999999999999988 5 443322 234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhhcCCCCChh
Q 047435          156 KAESSLCLIGLLFFSFLVVRPAVLLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGPPLG  235 (724)
Q Consensus       156 ~l~~~~~~~~f~~~~~~v~r~~~~~~~~~~~~~~~~~e~~~~~il~~~l~~~~~~~~~G~~~~lGaFlaGl~~~~~~p~~  235 (724)
                      ++|.+++.++|++++++++||++.|+.++++++++.++.++.++++++++++++++.+|+|+++|||++|+++|+. |++
T Consensus       234 ~l~~~l~~~~f~~~~~~v~r~~~~~~~r~~~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~~-~~~  312 (832)
T PLN03159        234 SLWVLLSSVAFVLFCFYVVRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNG-PLG  312 (832)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCCc-chH
Confidence            5677778888888999999999999999999888889999999999999999999999999999999999999984 899


Q ss_pred             hHHHHHHhhhhhhhhhHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHhhhh
Q 047435          236 SALVEKCDFVISNILLPFFYLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFFGTSLRFGILFSFILNVK  315 (724)
Q Consensus       236 ~~l~ekl~~~~~~~flPlFF~~~G~~~d~~~l~~~~~~~~~~~ii~~~~~~K~~~~~l~~~~~~~~~~~~~~lg~~m~~k  315 (724)
                      +++.+|++++++++|+|+||+++|+++|+..+.+...|..+++++++++++|+++++++++++|+|++|++.+|++||+|
T Consensus       313 ~~l~ekle~~~~~lflPlFFv~vGl~idl~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~k  392 (832)
T PLN03159        313 VTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTK  392 (832)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhheeeHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999888654456666777888899999999999999999999999999999999


Q ss_pred             hhHHHHhhhhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccchhhhccccccCCCCCceeEEEEeecc
Q 047435          316 GINEFMLLNRLRVNFKTIDEASYATMVLSHLAVNAIVTPIICIYHKPQTRCKVTEDKQMRTLQTTPISSELRIFCGVHFE  395 (724)
Q Consensus       316 G~~~l~~~~~~~~~~~~i~~~~~~~lv~~~ll~t~i~~~l~~~l~~p~~~~~~~~~~~~r~i~~~~~~~elrILvcv~~~  395 (724)
                      |+++++++++|++ .|+++++.|++++++++++|.+.+|++.++|+|+||+..   |++|++|+.++++|+|||+|+|++
T Consensus       393 G~~~Lii~~ig~~-~gvi~~~~f~~lVl~avl~T~i~~Plv~~ly~p~rk~~~---~~~r~i~~~~~~~elriL~cv~~~  468 (832)
T PLN03159        393 GLVEMIVLNVGRD-QEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVG---YKRRTIQRSKHDAELRMLVCVHTP  468 (832)
T ss_pred             cHHHHHHHHHHHh-cCccCchhhhHHHHHHHHHHHHHHHHHHHHhCHHhhhcc---ccccccccCCCCCceeEEEEeccC
Confidence            9999999999999 999999999999999999999999999999999999998   999999999999999999999999


Q ss_pred             CChHHHHHHHHHhCCCCCCCcEEEEEEEeeecCCCccccccchhhhhhc----ccccchHHHHHHHHHhhhcCCCCeEEE
Q 047435          396 GNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPYNAQKLRL----IREDSTYRIMHAAEKQFRSSDVPFTIL  471 (724)
Q Consensus       396 ~~~~~li~l~~~~~~~~~~p~~v~~lhlvel~~r~~p~~~~~~~~~~~~----~~~~~~~~i~~af~~~~~~~~~~v~v~  471 (724)
                      +|++++++|++++++++++|.++|++||||+++|++|.+++|+.++...    .+..++|+++++|+.|++++ ++++++
T Consensus       469 ~~v~~li~Lle~s~~t~~sp~~vy~lhLveL~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~-~~v~v~  547 (832)
T PLN03159        469 RNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQ  547 (832)
T ss_pred             CcHHHHHHHHHhcCCCCCCCceEEEEEEEeecCCCccceeeeecccccccccccccccccHHHHHHHHHHhhc-CceEEE
Confidence            9999999999999999999999999999999999999999998764321    12345899999999999764 689999


Q ss_pred             EeEEEcCCCChHHHHHHHHHhcCCCEEEeccccCCC--CCc---c-cchhHHHHHhhcCCCceEEEecCCCCCCCccccC
Q 047435          472 PYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQ--GRT---T-NLQNFDMNIQAHAPCTVGLLVDKSSTTGHFYSIG  545 (724)
Q Consensus       472 ~~~~vs~~~~m~~~I~~~A~e~~~~lIIlp~h~~~~--g~~---~-~~~~~~~~Vl~~ApCsVgilVdrg~~~~~~~~~~  545 (724)
                      ++|++||+++||+|||++|+|+++++||+||||+|+  |++   + .+|.+|+|||++||||||||||||.....+.+..
T Consensus       548 ~~t~vs~~~~mh~dIc~~A~d~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~~~~~~~~  627 (832)
T PLN03159        548 PLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASN  627 (832)
T ss_pred             EEEEEeCcccHHHHHHHHHHhcCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCcccccccc
Confidence            999999999999999999999999999999999998  654   3 8999999999999999999999996532222233


Q ss_pred             CcceEEEEeecCCcchHHHHHHHHHHhcCCCeEEEEEEEeeccccc-------------------cchhhhhhhHHHHHH
Q 047435          546 HFTYSLVVLFLGGADDREALALVSRMSGHPGLSITVFRITVIEDEQ-------------------SEYDCERHLDEIAIN  606 (724)
Q Consensus       546 ~~~~~I~v~f~GG~ddreAL~~a~rma~~~~~~ltv~r~~~~~~~~-------------------~~~~~~~~~d~~~i~  606 (724)
                      ...++|+++|+|||||||||+||+|||+||++++||+||++.+...                   +.++.|+++||++++
T Consensus       628 ~~~~~v~~~F~GG~DDREALa~a~rma~~p~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~  707 (832)
T PLN03159        628 QVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYIN  707 (832)
T ss_pred             ccceeEEEEecCCcchHHHHHHHHHHhcCCCeEEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence            4468999999999999999999999999999999999999642111                   112568889999999


Q ss_pred             HHHhhccCCCceEEEEEEecChHHHHHHHHhhcCCccEEEEcccCCCCchhhhccccccCCcccchhhhhhhcCCCCCCc
Q 047435          607 EFITNNISNACVACRQVIAKNTTEVIDVIRRMDGYYNLVIVGKKRAVTSRLEEEMKLWVEYEELGVIGDTLASVDFCKGM  686 (724)
Q Consensus       607 ~~~~~~~~~~~v~y~e~~v~~~~~~~~~i~~~~~~~dLvivGr~~~~~s~~~~gl~~W~e~~eLG~igd~las~d~~~~~  686 (724)
                      ||+.++..+++|.|+||+|+|++|+.++||+++++|||+||||+|+.+|++|+||+||+||||||+|||+|||+|| +++
T Consensus       708 ef~~~~~~~~~v~y~E~~V~~~~e~~~~l~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~-~~~  786 (832)
T PLN03159        708 EFRARNAGNESIVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDF-AAT  786 (832)
T ss_pred             HHHHhcCCCCceEEEEEecCCHHHHHHHHHHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCC-CCc
Confidence            9999998888999999999999999999999999999999999998889999999999999999999999999999 999


Q ss_pred             ccEEEEEeccC
Q 047435          687 TSVLVIQCGIG  697 (724)
Q Consensus       687 ~svLvvqq~~~  697 (724)
                      +||||||||+.
T Consensus       787 ~SVLVvQQ~~~  797 (832)
T PLN03159        787 VSVLVVQQYVG  797 (832)
T ss_pred             eeEEEEEeecc
Confidence            99999999985

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PRK04288 antiholin-like protein LrgB; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PRK15475 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15476 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>PRK15477 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>COG3329 Predicted permease [General function prediction only] Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>COG1883 OadB Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit [Energy production and conversion] Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>PRK10711 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01109 Na_pump_decarbB sodium ion-translocating decarboxylase, beta subunit Back     alignment and domain information
>TIGR00659 conserved hypothetical protein TIGR00659 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query724
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.92
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.69
3olq_A319 Universal stress protein E; structural genomics, P 99.66
3loq_A294 Universal stress protein; structural genomics, PSI 99.65
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.63
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.6
3s3t_A146 Nucleotide-binding protein, universal stress PROT 99.0
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.97
3fdx_A143 Putative filament protein / universal stress PROT; 98.94
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.93
3dlo_A155 Universal stress protein; unknown function, struct 98.9
3fg9_A156 Protein of universal stress protein USPA family; A 98.89
3tnj_A150 Universal stress protein (USP); structural genomic 98.89
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.88
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.85
2z08_A137 Universal stress protein family; uncharacterized c 98.84
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.83
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.8
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.77
3mt0_A290 Uncharacterized protein PA1789; structural genomic 98.36
1q77_A138 Hypothetical protein AQ_178; structural genomics, 98.35
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.35
3olq_A319 Universal stress protein E; structural genomics, P 98.24
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.22
3loq_A294 Universal stress protein; structural genomics, PSI 98.21
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.21
3fdx_A143 Putative filament protein / universal stress PROT; 98.19
3dlo_A155 Universal stress protein; unknown function, struct 98.16
2z08_A137 Universal stress protein family; uncharacterized c 98.15
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.12
3tnj_A150 Universal stress protein (USP); structural genomic 98.1
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.09
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 98.01
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.0
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 97.95
3fg9_A156 Protein of universal stress protein USPA family; A 97.93
1q77_A138 Hypothetical protein AQ_178; structural genomics, 97.8
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 97.62
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.53
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 97.5
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 96.32
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.92  E-value=2.7e-25  Score=238.32  Aligned_cols=303  Identities=12%  Similarity=0.112  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChHHH----HHhhh--HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhHHHHHhhh
Q 047435           27 MVINTLSTLSGVYFIFIISVKMDTVKI----LRAAK--HTWFITIACLVIPYMIAMFLSRILSDYTPGVERGLFRLYFTS  100 (724)
Q Consensus        27 ~~l~~l~~iGl~~~lF~~Gle~d~~~l----~~~~k--~~~~i~~~~~lip~~~g~~~~~~l~~~~~~~~~~~l~l~~~~  100 (724)
                      .....+.+-.+.+|||++|+|+|.+.+    ++.+|  .+...++.|+++|++++.    .+....    .....-  ..
T Consensus        58 ~l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~----~~~~~~----~~~~~g--w~  127 (388)
T 1zcd_A           58 NMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL----AFNYAD----PITREG--WA  127 (388)
T ss_dssp             EHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG----GGCCSS----TTHHHH--TS
T ss_pred             cHHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH----HHhcCC----hhhhhh--hH
Confidence            345667778888999999999999887    55555  478889999999998732    222211    233344  55


Q ss_pred             hhccccHHHHHHHHHhccccCCh-hHHHHHHHHHHHHHHHHHHHHH-HHhccCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 047435          101 LLSMTYFSTVADAVSELKLLTSE-LGQLAMSSSMLAELLGWIALMA-EAVFNKSLGHKAESSLCLIGLLFFSFLVVRPAV  178 (724)
Q Consensus       101 ~~s~Ts~~vv~~iL~el~ll~s~-~G~lals~a~i~D~~~~ill~i-~~~~~~~~~~~l~~~~~~~~f~~~~~~v~r~~~  178 (724)
                      +.+.|+.+....++..++..... .++.+++.|++||+.+|+++++ +.  ++.  ...+... .++++++.        
T Consensus       128 ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt--~~~--~~~~l~~-~~~~~~~~--------  194 (388)
T 1zcd_A          128 IPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT--NDL--SMASLGV-AAVAIAVL--------  194 (388)
T ss_dssp             SSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC--CCC--CHHHHHH-HHHHHHHH--------
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc--CCc--cHHHHHH-HHHHHHHH--------
Confidence            66678888888999998765544 5699999999999999999998 42  111  1222222 22222211        


Q ss_pred             HHHHHhCCCCCCCchhHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhhcCCCC----ChhhHHHHHHhhhhhhhhhHHH
Q 047435          179 LLVVNRTPEGKPVKEGYVIGLMILPIAMGALTDMLGVSFALGALIVGLIVPAGP----PLGSALVEKCDFVISNILLPFF  254 (724)
Q Consensus       179 ~~~~~~~~~~~~~~e~~~~~il~~~l~~~~~~~~~G~~~~lGaFlaGl~~~~~~----p~~~~l~ekl~~~~~~~flPlF  254 (724)
                       +..+|..    +++...+.++ . +.+.+.++..|+|+++|+|++|+++|..+    +..++++++++++++.+++|+|
T Consensus       195 -~~l~r~~----v~~~~~y~~l-g-l~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilPlF  267 (388)
T 1zcd_A          195 -AVLNLCG----ARRTGVYILV-G-VVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLF  267 (388)
T ss_dssp             -HHHHHTT----CCCTHHHHHH-H-HHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHHHH
T ss_pred             -HHHHHhc----chhHHHHHHH-H-HHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence             1222321    1223333433 2 24556779999999999999999999863    4578999999999999999999


Q ss_pred             -HHHhcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCChhHHHHHHHHhhhhhhHHHHhh
Q 047435          255 -YLRIGLLTNVHSIKNFKSFAALETILVGAYVGKLVGSLCTVLFF----------GTSLRFGILFSFILNVKGINEFMLL  323 (724)
Q Consensus       255 -F~~~G~~~d~~~l~~~~~~~~~~~ii~~~~~~K~~~~~l~~~~~----------~~~~~~~~~lg~~m~~kG~~~l~~~  323 (724)
                       |+..|.++|...+..... .....+++..+++|++|++..++..          |++|+|...+|.+++.+++++++++
T Consensus       268 aFanaGv~l~~~~~~~l~~-~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftmsL~Ia  346 (388)
T 1zcd_A          268 AFANAGVSLQGVTLDGLTS-ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIA  346 (388)
T ss_dssp             HHHHCCCCCSSSCCCTHHH-HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHHHHHH
T ss_pred             HHHhcCeeecccchhhccC-hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHHHHHH
Confidence             999999999854322101 1123455566899999966666665          9999999999999999999999999


Q ss_pred             hhccccccC--CChhhHHHHHHHHHHHHHHHHHHHHHhcC
Q 047435          324 NRLRVNFKT--IDEASYATMVLSHLAVNAIVTPIICIYHK  361 (724)
Q Consensus       324 ~~~~~~~~~--i~~~~~~~lv~~~ll~t~i~~~l~~~l~~  361 (724)
                      +++++ .+.  +.++.+..+++++++++++++.++++.++
T Consensus       347 ~laf~-~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~~~  385 (388)
T 1zcd_A          347 SLAFG-SVDPELINWAKLGILVGSISSAVIGYSWLRVRLR  385 (388)
T ss_dssp             HHHST-TSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC-
T ss_pred             HHhcc-CCchhhHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99998 765  35677999999999998888888876653
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query724
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 99.11
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 99.11
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.97
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.89
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.84
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.45
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.21
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.15
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.0
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.0
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 97.96
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 96.51
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.11  E-value=3.1e-10  Score=105.43  Aligned_cols=137  Identities=15%  Similarity=0.193  Sum_probs=92.6

Q ss_pred             eEEEEeeccCChHHHHHHHHHhCCCCCCCcEEEEEEEeeecCCCccccccc-hh---h-h-hhc----c---cccchHHH
Q 047435          387 RIFCGVHFEGNIRSIVALLKACNPCETSPMCVYLVHLIELVGRASPVLAPY-NA---Q-K-LRL----I---REDSTYRI  453 (724)
Q Consensus       387 rILvcv~~~~~~~~li~l~~~~~~~~~~p~~v~~lhlvel~~r~~p~~~~~-~~---~-~-~~~----~---~~~~~~~i  453 (724)
                      |||+|++..++...+++.+..++...  ...++++|+++......+..... ..   . . ..+    .   -..+.++.
T Consensus         5 ~ILvavD~s~~s~~al~~a~~la~~~--~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
T d1mjha_           5 KILYPTDFSETAEIALKHVKAFKTLK--AEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNK   82 (160)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHTCCSS--CCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHHhc--CCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999998764  46899999998765322211000 00   0 0 000    0   01122333


Q ss_pred             HHHHHHhhhcCCCCeEEEEeEEEcCCCChHHHHHHHHHhcCCCEEEeccccCCC-CCcccchhHHHHHhhcCCCceEEE
Q 047435          454 MHAAEKQFRSSDVPFTILPYKMIAPYDTMHESICELVKEKFIPLVVLPFNKKRQ-GRTTNLQNFDMNIQAHAPCTVGLL  531 (724)
Q Consensus       454 ~~af~~~~~~~~~~v~v~~~~~vs~~~~m~~~I~~~A~e~~~~lIIlp~h~~~~-g~~~~~~~~~~~Vl~~ApCsVgil  531 (724)
                      ++.+..-.+.  .++.++.....   ++..+.|++.|++.++|+||||.|++.. .+. .+|++.++|++++||+|.|+
T Consensus        83 l~~~~~~~~~--~gv~~~~~~~~---G~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~-~~GS~a~~vl~~s~~pVlvV  155 (160)
T d1mjha_          83 MENIKKELED--VGFKVKDIIVV---GIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEI-LLGSVTENVIKKSNKPVLVV  155 (160)
T ss_dssp             HHHHHHHHHH--TTCEEEEEEEE---ECHHHHHHHHHHHTTCSEEEEESCCSSCCTTC-SSCHHHHHHHHHCCSCEEEE
T ss_pred             HHHHHHHHHh--cCCeEEEEEEe---ccHHHHHhhhhhccccceEEeccCCCCccccc-ccCcHHHHHHhcCCCCEEEE
Confidence            3333332222  25666665554   6899999999999999999999998764 221 68999999999999998776
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure