Citrus Sinensis ID: 047535

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
MSPATYFYPNNVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTKQ
ccccccccccccccccccccccEEEEEEEEccccccEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEEEEEEEEEEEcccccccccEEEEEEccccccccccccEEEEccccccHHHHHHHHHccccEEEEEcccccccccccEEEEEcccccccccccEEcccccccccccEEEEEEEEEEccEEcccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccEEEcccccccccEEEEEEccccEEEEccccEEEEcccccEEEEEEEcccccEEEEEEEEEEEEEEEEEccccEEEEEccccccc
ccccccccccccccccccccccEEEEEEEEcccccccEEEEEEcccccEEEEccccHHHHccccccccccccccccccccccHHHHccccccccccccEEEEEEEcccccccEEEEEEEEEEcccccccccEEEEEcccccccEccccccEEEcccccccccccccHHccccEEEEEEEccccccccccEEEEccccccccccEEEEEEEccccccEEEEEEEEEEEccEEEEccccHHHcccccccccEEEEEcccEEEcccHHHHHHHHHHHHHHHcccccccccccEcEEEccccccccccEEEEEEccccEEcccccHEEEEEccccEEEEEEccccccEEEEEEEEEccEEEEEEccccEEEEcccccccc
mspatyfypnnvvqsnvstangeyvmkfsigtpplldiygivdtgsdlmwvqclpcvqcykqvkpiynpassssykelscqseqchlldtvscssqqlcnytygyadssltkgvlateritfgnsnnffdnvvfgcghnntgvfnenemglvgLGRTRLSLASQILSQlgankfsyclvpfhtdssitskmyfgngsevsgggvvstslvskedktYYFVTLEGisvgnlsnssklipyynssgaiskgnmfidtgapptllpkdFYNRLEEQVRNAIkltpyqdprlgsqlcyktpsmagiapiltahfdggakvplihtstfipppvegvfcfamqpidgdvgifgnfaqsdlfigydfdsqmvsfkptdctkq
mspatyfypnnvVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEgisvgnlsnssKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAikltpyqdprlgSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTKQ
MSPATYFYPNNVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSITSKMYFgngsevsgggvvstslvsKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTKQ
*****YFYPNNVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPA****YKELSCQSEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMV**********
*S***************STANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYN****************C**********QQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVP************FGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRN**********RLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCT**
MSPATYFYPNNVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPA***********SEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSF********
*****Y**PNNVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDC***
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MSPATYFYPNNVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTKQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query376 2.2.26 [Sep-21-2011]
Q6XBF8437 Aspartic proteinase CDR1 no no 0.933 0.803 0.445 4e-72
Q3EBM5447 Probable aspartic proteas no no 0.928 0.780 0.408 3e-60
Q766C3437 Aspartic proteinase nepen N/A no 0.914 0.787 0.383 2e-57
Q766C2438 Aspartic proteinase nepen N/A no 0.917 0.787 0.381 7e-57
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.901 0.678 0.352 7e-50
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.922 0.738 0.301 4e-35
Q9LZL3453 Aspartic proteinase PCS1 no no 0.864 0.717 0.289 6e-23
Q9S9K4475 Aspartic proteinase-like no no 0.856 0.677 0.235 8e-19
Q9LX20528 Aspartic proteinase-like no no 0.843 0.600 0.258 3e-15
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.486 0.446 0.301 3e-11
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  272 bits (695), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 226/368 (61%), Gaps = 17/368 (4%)

Query: 14  QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSS 73
           Q ++++ +GEY+M  SIGTPP   I  I DTGSDL+W QC PC  CY QV P+++P +SS
Sbjct: 80  QIDLTSNSGEYLMNVSIGTPPF-PIMAIADTGSDLLWTQCAPCDDCYTQVDPLFDPKTSS 138

Query: 74  SYKELSCQSEQCHLLDT-VSCSS-QQLCNYTYGYADSSLTKGVLATERITFGNSNNF--- 128
           +YK++SC S QC  L+   SCS+    C+Y+  Y D+S TKG +A + +T G+S+     
Sbjct: 139 TYKDVSCSSSQCTALENQASCSTNDNTCSYSLSYGDNSYTKGNIAVDTLTLGSSDTRPMQ 198

Query: 129 FDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSIT 188
             N++ GCGHNN G FN+   G+VGLG   +SL  Q+   +   KFSYCLVP  +    T
Sbjct: 199 LKNIIIGCGHNNAGTFNKKGSGIVGLGGGPVSLIKQLGDSIDG-KFSYCLVPLTSKKDQT 257

Query: 189 SKMYFGNGSEVSGGGVVSTSLVSK-EDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAIS 247
           SK+ FG  + VSG GVVST L++K   +T+Y++TL+ ISVG     SK I Y  S    S
Sbjct: 258 SKINFGTNAIVSGSGVVSTPLIAKASQETFYYLTLKSISVG-----SKQIQYSGSDSESS 312

Query: 248 KGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILT 307
           +GN+ ID+G   TLLP +FY+ LE+ V ++I     QDP+ G  LCY       + P++T
Sbjct: 313 EGNIIIDSGTTLTLLPTEFYSELEDAVASSIDAEKKQDPQSGLSLCYSATGDLKV-PVIT 371

Query: 308 AHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVS 367
            HFD GA V L  ++ F+    E + CFA +       I+GN AQ +  +GYD  S+ VS
Sbjct: 372 MHFD-GADVKLDSSNAFVQVS-EDLVCFAFRG-SPSFSIYGNVAQMNFLVGYDTVSKTVS 428

Query: 368 FKPTDCTK 375
           FKPTDC K
Sbjct: 429 FKPTDCAK 436
Involved in salicylic acid-dependent inducible resistance responses. May release an endogenous peptide elicitor required for the activation of inducible resistance mechanisms. Possesses protease activity in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
147811402440 hypothetical protein VITISV_006732 [Viti 0.946 0.809 0.612 1e-121
225436202440 PREDICTED: probable aspartic protease At 0.946 0.809 0.612 1e-121
296090179334 unnamed protein product [Vitis vinifera] 0.856 0.964 0.564 1e-106
356540371374 PREDICTED: probable aspartic protease At 0.944 0.949 0.536 1e-102
356495754420 PREDICTED: probable aspartic protease At 0.941 0.842 0.528 1e-102
357481199416 Aspartic proteinase nepenthesin-1 [Medic 0.944 0.853 0.512 1e-97
357450869443 Aspartic proteinase nepenthesin-1 [Medic 0.933 0.792 0.530 3e-95
357481191427 Aspartic proteinase nepenthesin-1 [Medic 0.930 0.819 0.514 6e-95
357481205413 Aspartic proteinase nepenthesin-1 [Medic 0.944 0.859 0.505 7e-94
357450863407 Aspartic proteinase nepenthesin-1 [Medic 0.944 0.872 0.518 5e-93
>gi|147811402|emb|CAN61225.1| hypothetical protein VITISV_006732 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/372 (61%), Positives = 277/372 (74%), Gaps = 16/372 (4%)

Query: 11  NVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPA 70
           N  +  VS+ NGEY+MK SIGTPP  D+YGI DTGSDLMW QCLPC+ CYKQ  P+++P+
Sbjct: 78  NTPEPPVSSNNGEYLMKISIGTPPF-DVYGIYDTGSDLMWTQCLPCLSCYKQKNPMFDPS 136

Query: 71  SSSSYKELSCQSEQCHLLDTVSCSS-QQLCNYTYGYADSSLTKGVLATERITFGNSNN-- 127
            S+S+KE+SC+S+QC LLDTVSCS  Q+LC+++YGY D SL +GV+ATE +T  NSN+  
Sbjct: 137 KSTSFKEVSCESQQCRLLDTVSCSQPQKLCDFSYGYGDGSLAQGVIATETLTL-NSNSGQ 195

Query: 128 --FFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGA-NKFSYCLVPFHTD 184
                N+VFGCGHNN+G FNENEMGL G G   LSL SQI+S LG+  KFS CLVPF TD
Sbjct: 196 PXSIXNIVFGCGHNNSGTFNENEMGLFGTGGRPLSLTSQIMSTLGSGRKFSQCLVPFRTD 255

Query: 185 SSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSG 244
            SITSK+ FG  +EVSG  VVST LV+K+D TYYFVTL+GISVG+     KL P+ +SS 
Sbjct: 256 PSITSKIIFGPEAEVSGSXVVSTPLVTKDDPTYYFVTLDGISVGD-----KLFPFSSSSP 310

Query: 245 AISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAP 304
             +KGN+FID G PPTLLP+DFYNRL + V+ AI + P QDP L  QLCY++ ++    P
Sbjct: 311 MATKGNVFIDAGTPPTLLPRDFYNRLVQGVKEAIPMEPVQDPDLQPQLCYRSATLID-GP 369

Query: 305 ILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQ 364
           ILTAHFD GA V L   +TFI P  EGV+CFAMQPIDGD GIFGNF Q +  IG+D D +
Sbjct: 370 ILTAHFD-GADVQLKPLNTFISPK-EGVYCFAMQPIDGDTGIFGNFVQMNFLIGFDLDGK 427

Query: 365 MVSFKPTDCTKQ 376
            VSFK  DCTKQ
Sbjct: 428 KVSFKAVDCTKQ 439

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225436202|ref|XP_002271145.1| PREDICTED: probable aspartic protease At2g35615-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296090179|emb|CBI39998.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356540371|ref|XP_003538663.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|356495754|ref|XP_003516738.1| PREDICTED: probable aspartic protease At2g35615-like [Glycine max] Back     alignment and taxonomy information
>gi|357481199|ref|XP_003610885.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355512220|gb|AES93843.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357450869|ref|XP_003595711.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355484759|gb|AES65962.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357481191|ref|XP_003610881.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355512216|gb|AES93839.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357481205|ref|XP_003610888.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355512223|gb|AES93846.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357450863|ref|XP_003595708.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355484756|gb|AES65959.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.933 0.803 0.418 1.8e-71
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.944 0.823 0.420 3.7e-71
TAIR|locus:504955954447 AT2G35615 [Arabidopsis thalian 0.936 0.787 0.377 1.2e-58
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.960 0.811 0.380 5.1e-58
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.922 0.694 0.357 1.9e-53
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.930 0.759 0.342 8.5e-49
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.944 0.731 0.341 3.7e-48
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.909 0.708 0.334 4.2e-47
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.941 0.732 0.343 6.2e-46
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.922 0.738 0.306 4.5e-43
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 154/368 (41%), Positives = 213/368 (57%)

Query:    14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSS 73
             Q ++++ +GEY+M  SIGTPP   I  I DTGSDL+W QC PC  CY QV P+++P +SS
Sbjct:    80 QIDLTSNSGEYLMNVSIGTPPF-PIMAIADTGSDLLWTQCAPCDDCYTQVDPLFDPKTSS 138

Query:    74 SYKELSCQSEQCHLLDT-VSCSSQQ-LCNYTYGYADSSLTKGVLATERITFGNSNNF--- 128
             +YK++SC S QC  L+   SCS+    C+Y+  Y D+S TKG +A + +T G+S+     
Sbjct:   139 TYKDVSCSSSQCTALENQASCSTNDNTCSYSLSYGDNSYTKGNIAVDTLTLGSSDTRPMQ 198

Query:   129 FDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSIT 188
               N++ GCGHNN G FN+   G+VGLG   +SL  Q+   +   KFSYCLVP  +    T
Sbjct:   199 LKNIIIGCGHNNAGTFNKKGSGIVGLGGGPVSLIKQLGDSIDG-KFSYCLVPLTSKKDQT 257

Query:   189 SKMYFXXXXXXXXXXXXXXXXXXK-EDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAIS 247
             SK+ F                  K   +T+Y++TL+ ISVG     SK I Y  S    S
Sbjct:   258 SKINFGTNAIVSGSGVVSTPLIAKASQETFYYLTLKSISVG-----SKQIQYSGSDSESS 312

Query:   248 KGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILT 307
             +GN+ ID+G   TLLP +FY+ LE+ V ++I     QDP+ G  LCY       + P++T
Sbjct:   313 EGNIIIDSGTTLTLLPTEFYSELEDAVASSIDAEKKQDPQSGLSLCYSATGDLKV-PVIT 371

Query:   308 AHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVS 367
              HFDG A V L  ++ F+    E + CFA +       I+GN AQ +  +GYD  S+ VS
Sbjct:   372 MHFDG-ADVKLDSSNAFVQVS-EDLVCFAFRG-SPSFSIYGNVAQMNFLVGYDTVSKTVS 428

Query:   368 FKPTDCTK 375
             FKPTDC K
Sbjct:   429 FKPTDCAK 436
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA;ISS;IDA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=IMP;IDA
GO:0010337 "regulation of salicylic acid metabolic process" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0048046 "apoplast" evidence=IDA
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23.25LOW CONFIDENCE prediction!
3rd Layer3.4.230.766
3rd Layer3.4.23.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00022953001
SubName- Full=Chromosome chr6 scaffold_28, whole genome shotgun sequence; (378 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-157
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-81
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 2e-55
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 2e-39
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 9e-15
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 1e-13
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-10
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 7e-10
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 4e-09
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 0.002
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  448 bits (1155), Expect = e-157
 Identities = 190/385 (49%), Positives = 241/385 (62%), Gaps = 20/385 (5%)

Query: 1   MSPATYFYPN----NVVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPC 56
           +S   +F P     N  QS++ +  GEY+M  SIGTPP+  I  I DTGSDL+W QC PC
Sbjct: 58  ISRVNHFRPTDASPNDPQSDLISNGGEYLMNISIGTPPV-PILAIADTGSDLIWTQCKPC 116

Query: 57  VQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTV-SCSSQQLCNYTYGYADSSLTKGVL 115
             CYKQV P+++P  SS+YK++SC S QC  L    SCS +  C Y+Y Y D S TKG L
Sbjct: 117 DDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTKGNL 176

Query: 116 ATERITFGNSNN---FFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILSQLGAN 172
           A E +T G+++     F  +VFGCGHNN G F+E   G+VGLG   LSL SQ+ S +G  
Sbjct: 177 AVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGG- 235

Query: 173 KFSYCLVPFHTDSSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSN 232
           KFSYCLVP  +DS+ TSK+ FG  + VSG GVVST LVSK+  T+Y++TLE ISVG    
Sbjct: 236 KFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVG---- 291

Query: 233 SSKLIPYYNSS-GAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQ 291
            SK +PY  SS   + +GN+ ID+G   TLLP DFY+ LE  V  AI      DP+    
Sbjct: 292 -SKKLPYTGSSKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLS 350

Query: 292 LCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVGIFGNFA 351
           LCY + S   + PI+TAHF  GA V L   +TF+    E + CFAM P    + IFGN A
Sbjct: 351 LCYSSTSDIKL-PIITAHFT-GADVKLQPLNTFVKVS-EDLVCFAMIPTS-SIAIFGNLA 406

Query: 352 QSDLFIGYDFDSQMVSFKPTDCTKQ 376
           Q +  +GYD +S+ VSFKPTDCTK 
Sbjct: 407 QMNFLVGYDLESKTVSFKPTDCTKM 431

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 376
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.96
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.91
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.91
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.33
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.3
PF1365090 Asp_protease_2: Aspartyl protease 96.92
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 96.16
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 96.09
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.64
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 94.69
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 92.38
COG3577215 Predicted aspartyl protease [General function pred 91.83
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 91.51
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.36
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 89.06
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 86.09
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 85.83
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 83.64
PF1365090 Asp_protease_2: Aspartyl protease 83.33
cd0609489 RP_Saci_like RP_Saci_like, retropepsin family. Ret 82.36
PF09668124 Asp_protease: Aspartyl protease; InterPro: IPR0191 81.82
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.9e-63  Score=480.37  Aligned_cols=354  Identities=52%  Similarity=0.922  Sum_probs=296.8

Q ss_pred             ceeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCC
Q 047535           12 VVQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTV   91 (376)
Q Consensus        12 ~~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~   91 (376)
                      .+..++...+++|+++|.|||||| ++.|++||||+++||+|.+|..|..+.++.|||++|+||+.++|+++.|..+...
T Consensus        73 ~~~~~~~~~~~~Y~v~i~iGTPpq-~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~  151 (431)
T PLN03146         73 DPQSDLISNGGEYLMNISIGTPPV-PILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQ  151 (431)
T ss_pred             ccccCcccCCccEEEEEEcCCCCc-eEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCC
Confidence            344455566789999999999999 9999999999999999999999998889999999999999999999999877643


Q ss_pred             -CCCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCC---CCcccEEEeeeeCCCCCCCCCcceEeecCCCCChHHHHHHh
Q 047535           92 -SCSSQQLCNYTYGYADSSLTKGVLATERITFGNSN---NFFDNVVFGCGHNNTGVFNENEMGLVGLGRTRLSLASQILS  167 (376)
Q Consensus        92 -~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~---~~~~~~~fg~~~~~~~~~~~~~~GilGL~~~~~s~~~ql~~  167 (376)
                       .|..++.|.|.+.|+||+.+.|.+++|++++++..   ++++++.|||++...+.|....+||||||+...|++.|+..
T Consensus       152 ~~c~~~~~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~  231 (431)
T PLN03146        152 ASCSDENTCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGS  231 (431)
T ss_pred             CCCCCCCCCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhH
Confidence             58777789999999999987899999999998732   35889999999987766644689999999999999999987


Q ss_pred             hcCCCeEEEecCCCCCCCCccceEEECCCCcccCCCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCCCC-cc
Q 047535          168 QLGANKFSYCLVPFHTDSSITSKMYFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSG-AI  246 (376)
Q Consensus       168 ~~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~~~-~~  246 (376)
                      .+.. +|++||.+...+....|.|+||+.+.....++.|+|++......+|.|.+.+|+|++     +.+.++...+ ..
T Consensus       232 ~~~~-~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg-----~~l~~~~~~~~~~  305 (431)
T PLN03146        232 SIGG-KFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGS-----KKLPYTGSSKNGV  305 (431)
T ss_pred             hhCC-cEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECC-----EECcCCccccccC
Confidence            7665 999999764333345799999996544445589999986433569999999999999     8777654322 12


Q ss_pred             CCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCceEEe
Q 047535          247 SKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTSTFIP  326 (376)
Q Consensus       247 ~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~y~~~  326 (376)
                      ....+||||||++++||+++|+++.++|.+.+......+.......|+...... .+|.|+|+|+| ..+.|+|++|++.
T Consensus       306 ~~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~-~~P~i~~~F~G-a~~~l~~~~~~~~  383 (431)
T PLN03146        306 EEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTSDI-KLPIITAHFTG-ADVKLQPLNTFVK  383 (431)
T ss_pred             CCCcEEEeCCccceecCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCCCC-CCCeEEEEECC-CeeecCcceeEEE
Confidence            345799999999999999999999999988876443333334567899754333 79999999997 9999999999998


Q ss_pred             cCCCCeEEEEEEccCCCceeechhhhcceEEEEECCCCEEEEecCCCCCC
Q 047535          327 PPVEGVFCFAMQPIDGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTDCTKQ  376 (376)
Q Consensus       327 ~~~~~~~C~~i~~~~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~c~~~  376 (376)
                      .. .+..|+++... ...||||+.|||++|+|||.+++|||||+++|.++
T Consensus       384 ~~-~~~~Cl~~~~~-~~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~~  431 (431)
T PLN03146        384 VS-EDLVCFAMIPT-SSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTKM  431 (431)
T ss_pred             cC-CCcEEEEEecC-CCceEECeeeEeeEEEEEECCCCEEeeecCCcCcC
Confidence            76 56789998865 45699999999999999999999999999999975

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd06094 RP_Saci_like RP_Saci_like, retropepsin family Back     alignment and domain information
>PF09668 Asp_protease: Aspartyl protease; InterPro: IPR019103 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
3vla_A413 Crystal Structure Of Edgp Length = 413 4e-04
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 4e-04
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 43/170 (25%)
Query: 34  PLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSC 93
           PL+    +VD G   +WV C    Q Y           SS+Y+ + C++ QC L  +++C
Sbjct: 31  PLVSENLVVDLGGRFLWVDC---DQNYV----------SSTYRPVRCRTSQCSLSGSIAC 77
Query: 94  SS-----QQLCN------YTYGYADSSLTKGVLATERI----TFGNSNNFFDNV---VFG 135
                  +  CN      +      ++ T G +A + +    T G+S+     V   +F 
Sbjct: 78  GDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFS 137
Query: 136 CGHNN------TGVFNENEMGLVGLGRTRLSLASQILSQLG-ANKFSYCL 178
           C   +      +GV     +G+ GLGRTR++L SQ  S      KF+ CL
Sbjct: 138 CAPTSLLQNLASGV-----VGMAGLGRTRIALPSQFASAFSFKRKFAMCL 182
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-74
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-68
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 3e-68
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 1e-16
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-15
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 2e-15
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 2e-15
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 1e-13
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 2e-13
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 6e-13
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 6e-12
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 1e-11
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-11
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-11
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 6e-11
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-10
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 4e-10
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 4e-10
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 5e-10
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 6e-10
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 6e-10
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 9e-10
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 9e-10
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 1e-09
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 1e-09
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 2e-09
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 2e-09
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 4e-09
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 2e-07
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 3e-07
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 8e-07
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 5e-06
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 1e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  236 bits (602), Expect = 1e-74
 Identities = 59/384 (15%), Positives = 104/384 (27%), Gaps = 27/384 (7%)

Query: 13  VQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASS 72
           VQ++ ST  G +       TP +  +  +VD   + +WV C           P  +    
Sbjct: 14  VQNDGST--GLHWANLQKRTPLM-QVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQC 70

Query: 73  SSYKELSCQSEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNF---- 128
           S      C S  C       C        +          G L  + +    +       
Sbjct: 71  SRANTHQCLS--CPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQL 128

Query: 129 -----FDNVVFGCGHNNTGV--FNENEMGLVGLGRTRLSLASQILSQLG-ANKFSYCLVP 180
                    +F C  +         N  G+ GLG   +SL +Q+ S  G   +F+ CL  
Sbjct: 129 GPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSR 188

Query: 181 FHTDSSITSKMYFGNGSEVSGGGVVSTSLVS----KEDKTYYFVTLEGISVGNLSNSSKL 236
           + T           N         +   L         +  Y V +  I +    +   L
Sbjct: 189 YPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQ-HSVFPL 247

Query: 237 IPYYNSSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKT 296
               ++    + G   I T  P  +L +  Y    +     +             LC+ +
Sbjct: 248 NKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNS 307

Query: 297 PSMAGIAPI-LTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPIDGDVG---IFGNFAQ 352
             +     + L      G    +      +     GV C  +             G    
Sbjct: 308 NKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQ-PGVTCLGVMNGGMQPRAEITLGARQL 366

Query: 353 SDLFIGYDFDSQMVSFKPTDCTKQ 376
            +  + +D     V F  +     
Sbjct: 367 EENLVVFDLARSRVGFSTSSLHSH 390
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.88
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.71
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.54
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 94.03
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.89
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 87.32
2hs1_A99 HIV-1 protease; ultra-high resolution active site 82.63
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
Probab=100.00  E-value=8.2e-59  Score=441.11  Aligned_cols=307  Identities=20%  Similarity=0.329  Sum_probs=260.4

Q ss_pred             eeccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCC
Q 047535           13 VQSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVS   92 (376)
Q Consensus        13 ~~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~   92 (376)
                      .+++.+..+.+|+++|+|||||| ++.|+|||||+++||++..|..|.|..|+.|+|++|+||+..+             
T Consensus        47 ~~~l~n~~d~~Y~~~i~iGTPpQ-~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~-------------  112 (370)
T 3psg_A           47 DEPLENYLDTEYFGTIGIGTPAQ-DFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS-------------  112 (370)
T ss_dssp             CCTTGGGTTCCEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-------------
T ss_pred             eecceeccCCEEEEEEEEcCCCC-EEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC-------------
Confidence            45566678899999999999999 9999999999999999999999999999999999999999988             


Q ss_pred             CCCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCC-CC-CCCcceEeecCCCC------ChHHHH
Q 047535           93 CSSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTG-VF-NENEMGLVGLGRTR------LSLASQ  164 (376)
Q Consensus        93 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGL~~~~------~s~~~q  164 (376)
                            |.|.+.|++|+. .|.++.|+|++++  ++++++.||+++...+ .| ...++||||||++.      .+++.+
T Consensus       113 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~--~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~  183 (370)
T 3psg_A          113 ------QELSITYGTGSM-TGILGYDTVQVGG--ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDN  183 (370)
T ss_dssp             ------EEEEEESSSCEE-EEEEEEEEEEETT--EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred             ------cEEEEEeCCceE-EEEEEEEEEeeCC--cccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHH
Confidence                  799999999996 8999999999999  8999999999998876 34 56689999999874      346777


Q ss_pred             HHhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccC
Q 047535          165 ILSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYN  241 (376)
Q Consensus       165 l~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~  241 (376)
                      |.++  +..++|++||...   ....|.|+|||.|..++ +.+.|+|+..   ..+|.|.+++|+|++     +.+..  
T Consensus       184 l~~qg~i~~~~FS~~L~~~---~~~~G~l~fGg~D~~~y~g~l~~~pv~~---~~~w~v~l~~i~v~g-----~~~~~--  250 (370)
T 3psg_A          184 LWDQGLVSQDLFSVYLSSN---DDSGSVVLLGGIDSSYYTGSLNWVPVSV---EGYWQITLDSITMDG-----ETIAC--  250 (370)
T ss_dssp             HHHTTCSSSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEECSE---ETTEEEEECEEESSS-----SEEEC--
T ss_pred             HHHCCCCCCCEEEEEEccC---CCCCeEEEEEeeChHhcCCcceeecccc---cceeEEEEeEEEECC-----EEEec--
Confidence            8776  7789999999865   23579999999776554 4599999987   668999999999999     76653  


Q ss_pred             CCCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCC
Q 047535          242 SSGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHT  321 (376)
Q Consensus       242 ~~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~  321 (376)
                          .....++|||||+++++|++++++|.++|.+...     ....+.++|...+    .+|+|+|.|+| ..++|+++
T Consensus       251 ----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~-----~~g~~~v~C~~~~----~lP~i~f~~~g-~~~~l~~~  316 (370)
T 3psg_A          251 ----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----SDGEMVISCSSID----SLPDIVFTIDG-VQYPLSPS  316 (370)
T ss_dssp             ----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TTCCEECCGGGGG----GCCCEEEEETT-EEEEECHH
T ss_pred             ----CCCceEEEcCCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEECCCcc----cCCcEEEEECC-EEEEECHH
Confidence                2456899999999999999999999999865421     2345678898766    89999999988 99999999


Q ss_pred             ceEEecCCCCeEEE-EEEccC-----CCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535          322 STFIPPPVEGVFCF-AMQPID-----GDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD  372 (376)
Q Consensus       322 ~y~~~~~~~~~~C~-~i~~~~-----~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~  372 (376)
                      +|+.+.  .+ .|+ +++..+     +..||||++|||++|+|||.+++|||||+++
T Consensus       317 ~yi~~~--~~-~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~  370 (370)
T 3psg_A          317 AYILQD--DD-SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             HHEEEC--SS-CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             HhcccC--CC-EEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence            999983  34 585 576632     3469999999999999999999999999974
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 376
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 3e-41
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-29
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 4e-26
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 7e-26
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 7e-25
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 2e-24
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-23
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 3e-23
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 9e-23
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-22
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 4e-22
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 4e-22
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 7e-22
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 2e-21
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 3e-21
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 6e-21
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-20
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 2e-20
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 6e-20
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 8e-20
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 3e-18
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 1e-13
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  147 bits (370), Expect = 3e-41
 Identities = 60/388 (15%), Positives = 114/388 (29%), Gaps = 51/388 (13%)

Query: 19  TANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKEL 78
            A   Y + F  G         ++D    L+W  C       +          +++Y   
Sbjct: 11  PATSLYTIPFHDGASL------VLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAP 64

Query: 79  SCQSEQCHLLDTVSCSSQQLCNYTYGYADSSLTKGVLATERITFGNSN------NFFDNV 132
            C +  C          +    Y Y     +   G L+  R     ++           V
Sbjct: 65  GCPAPSC----GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGV 120

Query: 133 VFGCGHNNTGVF-NENEMGLVGLGRTRLSLASQILSQLGANKFSYCLVPFHTDSSITSKM 191
           +  C  +           G+ GL  + L+L +Q ++        + L        +    
Sbjct: 121 LAACAPSKLLASLPRGSTGVAGLANSGLALPAQ-VASAQKVANRFLLCLPTGGPGVAIFG 179

Query: 192 YFGNGSEVSGGGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNSSGAISKGNM 251
                       +  T LV+K     ++++   I VG+              GA++ G +
Sbjct: 180 GGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVP-------VPEGALATGGV 232

Query: 252 FIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQ--------DPRLGSQLCYKTPSMAGIA 303
            + T  P  LL  D Y  L +    A+              +      +CY T ++    
Sbjct: 233 MLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNL 292

Query: 304 -----PILTAHFDGGAKVPLIHTSTFIPPPVEGVFCFAMQPI--------DGDVGIFGNF 350
                P +    DGG+   +   ++ +    +G  C A   +             I G  
Sbjct: 293 GGYAVPNVQLGLDGGSDWTMTGKNSMVDVK-QGTACVAFVEMKGVAAGDGRAPAVILGGA 351

Query: 351 AQSDLFIGYDFDSQMVSF----KPTDCT 374
              D  + +D + + + F      T C 
Sbjct: 352 QMEDFVLDFDMEKKRLGFSRLPHFTGCG 379
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2.5e-55  Score=416.19  Aligned_cols=307  Identities=20%  Similarity=0.316  Sum_probs=257.2

Q ss_pred             eccccccCceEEEEEEeCCCCCceEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccCCCCCCCC
Q 047535           14 QSNVSTANGEYVMKFSIGTPPLLDIYGIVDTGSDLMWVQCLPCVQCYKQVKPIYNPASSSSYKELSCQSEQCHLLDTVSC   93 (376)
Q Consensus        14 ~~~~~~~~~~y~~~i~iGtp~q~~~~l~~DTGSs~~wv~~~~C~~c~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~~c   93 (376)
                      .++.+..+.+|+++|.|||||| +++|+|||||+++||+|..|..|.|+.++.|+|++|+||+..+              
T Consensus        48 ~~l~n~~d~~Y~~~i~iGtP~Q-~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~--------------  112 (370)
T d3psga_          48 EPLENYLDTEYFGTIGIGTPAQ-DFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS--------------  112 (370)
T ss_dssp             CTTGGGTTCCEEEEEEETTTTE-EEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE--------------
T ss_pred             cccccccCCEEEEEEEEcCCCe-EEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccCC--------------
Confidence            3555667799999999999999 9999999999999999999999999999999999999999988              


Q ss_pred             CCCCCCeeeEEeCCCCeeeEEEEEEEEEecCCCCCcccEEEeeeeCCCCCC--CCCcceEeecCCCC------ChHHHHH
Q 047535           94 SSQQLCNYTYGYADSSLTKGVLATERITFGNSNNFFDNVVFGCGHNNTGVF--NENEMGLVGLGRTR------LSLASQI  165 (376)
Q Consensus        94 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGL~~~~------~s~~~ql  165 (376)
                           |.+.+.|++|+. .|.++.|++.+++  .+++++.|+++......+  ....+||+|||+..      ..++.++
T Consensus       113 -----~~~~~~Yg~Gs~-~G~~~~d~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~~~l  184 (370)
T d3psga_         113 -----QELSITYGTGSM-TGILGYDTVQVGG--ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNL  184 (370)
T ss_dssp             -----EEEEEESSSCEE-EEEEEEEEEEETT--EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHH
T ss_pred             -----CcEEEEeCCceE-EEEEEEEEEeeec--eeeeeeEEEEEeeccCceecccccccccccccCcccccCCCchhhhh
Confidence                 799999999987 6999999999999  889999999999887643  55689999999863      3466677


Q ss_pred             Hhh--cCCCeEEEecCCCCCCCCccceEEECCCCcccC-CCceeeeeecCCCCceEEEEEeeEEecCCCCceeeEeccCC
Q 047535          166 LSQ--LGANKFSYCLVPFHTDSSITSKMYFGNGSEVSG-GGVVSTSLVSKEDKTYYFVTLEGISVGNLSNSSKLIPYYNS  242 (376)
Q Consensus       166 ~~~--~~~~~fs~~l~~~~~~~~~~G~l~~Gg~~~~~~-~~~~~~p~~~~~~~~~w~v~~~~i~v~~~~~~~~~~~~~~~  242 (376)
                      ..+  +..++|++++....   ...|.|+|||.|..+. +.+.|+|+..   ..+|.|.++++.+++     +.+..   
T Consensus       185 ~~~~~i~~~~fs~~l~~~~---~~~g~l~~Gg~d~~~~~~~l~~~p~~~---~~~w~v~~~~i~v~g-----~~~~~---  250 (370)
T d3psga_         185 WDQGLVSQDLFSVYLSSND---DSGSVVLLGGIDSSYYTGSLNWVPVSV---EGYWQITLDSITMDG-----ETIAC---  250 (370)
T ss_dssp             HHTTCSSSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEECSE---ETTEEEEECEEESSS-----SEEEC---
T ss_pred             hhhcccccceeEEEeecCC---CCCceEecCCcCchhcccceeEEeecc---cceEEEEEeeEEeCC-----eEEec---
Confidence            665  67799999998652   3468999999776554 4599999987   668999999999999     76664   


Q ss_pred             CCccCCCceEEecCCCCccccHHHHHHHHHHHHHHhcCCCCCCCCCCccceeecCCCCCCCCeEEEEecCCceEEECCCc
Q 047535          243 SGAISKGNMFIDTGAPPTLLPKDFYNRLEEQVRNAIKLTPYQDPRLGSQLCYKTPSMAGIAPILTAHFDGGAKVPLIHTS  322 (376)
Q Consensus       243 ~~~~~~~~~iiDTGt~~i~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~~~g~~~~~i~~~~  322 (376)
                         .....++|||||++++||++++++|.++|.+...     ....+.+.|+..+    .+|.|+|+|+| ..+.|+|++
T Consensus       251 ---~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~-----~~~~~~~~C~~~~----~~P~l~f~f~g-~~~~l~~~~  317 (370)
T d3psga_         251 ---SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----SDGEMVISCSSID----SLPDIVFTIDG-VQYPLSPSA  317 (370)
T ss_dssp             ---TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TTCCEECCGGGGG----GCCCEEEEETT-EEEEECHHH
T ss_pred             ---CCCccEEEecCCceEeCCHHHHHHHHHHhCCeee-----cCCcEEEeccccC----CCceEEEEECC-EEEEEChHH
Confidence               2456899999999999999999999999765432     2344667888766    89999999988 999999999


Q ss_pred             eEEecCCCCeEEEEEEcc-----CCCceeechhhhcceEEEEECCCCEEEEecCC
Q 047535          323 TFIPPPVEGVFCFAMQPI-----DGDVGIFGNFAQSDLFIGYDFDSQMVSFKPTD  372 (376)
Q Consensus       323 y~~~~~~~~~~C~~i~~~-----~~~~~ilG~~fl~~~y~vFD~~~~rIGfa~~~  372 (376)
                      |+++..  +.|++++...     ..+.||||++|||++|+|||.+++||||||+.
T Consensus       318 yi~~~~--~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         318 YILQDD--DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             HEEECS--SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             eEEEcC--CeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence            999864  4444444432     25679999999999999999999999999963
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure