Citrus Sinensis ID: 047574

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
Protein Sequence
MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHccccc
Coil and Loop (DISEMBL)
MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLtftakfsnepvfKYFVVAEAIACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGkkgnshagwlpicgqvpkfcdhvtGALVCGFVAAIVYALLLVFSLYSalgpvfgvkp
Flexible Loop (DISEMBL)
MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSalgpvfgvkp
Low Complexity Region (SEG)
MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTlvvlilssrsllwrlivilDAVMtavltssisaalaiaRVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP
Disordered region (IsUnstruct)
*****RIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFG***
Disordered Region (DISOPRED)
****KRI*TNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPV*****
Disordered Region (DISEMBL)
MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP
Disordered Region (DISPRO)
*TMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGV**
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	163	2.2.26 [Sep-21-2011]
B9H2V1	163	CASP-like protein POPTRDR	yes	no	1.0	1.0	0.668	9e-58
B9N3F4	163	CASP-like protein POPTRDR	no	no	1.0	1.0	0.668	1e-57
B9RZ92	164	CASP-like protein RCOM_09	N/A	no	0.975	0.969	0.654	1e-54
B9RW00	163	CASP-like protein RCOM_11	N/A	no	0.969	0.969	0.563	2e-49
A7R333	159	CASP-like protein GSVIVT0	yes	no	0.963	0.987	0.611	3e-48
B9N5U6	171	CASP-like protein POPTRDR	no	no	0.914	0.871	0.557	1e-43
A7PJ32	161	CASP-like protein VIT_12s	yes	no	0.920	0.931	0.546	1e-42
D7KCH2	164	CASP-like protein ARALYDR	N/A	no	0.950	0.945	0.483	7e-41
Q9LR57	164	CASP-like protein At1g037	yes	no	0.950	0.945	0.483	7e-41
B9N2D0	162	CASP-like protein POPTRDR	no	no	0.883	0.888	0.541	4e-40

>sp|B9H2V1|CSPL6_POPTR CASP-like protein POPTRDRAFT_758901 OS=Populus trichocarpa GN=POPTRDRAFT_758901 PE=3 SV=1

 Score =  222 bits (565), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 109/163 (66%), Positives = 129/163 (79%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M   K+I TN LRL+AL ATV AIV MVTSH SA+V NLTFT K+SN PVFKYFV+AEAI
Sbjct: 1   MAKIKKIFTNFLRLLALAATVVAIVFMVTSHDSAQVLNLTFTVKYSNTPVFKYFVIAEAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
           A GY ++ ++LS +SL WRL+VILD V   +LTSSISAALAIA+VGKKGN+HAGWLP+C 
Sbjct: 61  AGGYIVISILLSFKSLFWRLLVILDMVTAVLLTSSISAALAIAQVGKKGNTHAGWLPVCE 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP 163
           QVP FCD VT AL+ GF AAI+Y +LL+ SLY  L P+F V P
Sbjct: 121 QVPDFCDQVTIALIAGFAAAIIYFVLLLCSLYVVLSPIFVVTP 163

Populus trichocarpa (taxid: 3694)

>sp|B9N3F4|CSPL9_POPTR CASP-like protein POPTRDRAFT_810994 OS=Populus trichocarpa GN=POPTRDRAFT_810994 PE=3 SV=1

 Score =  222 bits (565), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 109/163 (66%), Positives = 129/163 (79%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M  + +I TN LRL+AL ATV AIV MVTSH SA+V NLTFTAK+SN P FKY V+ EAI
Sbjct: 1   MAKSNKIFTNTLRLLALAATVVAIVFMVTSHDSAQVLNLTFTAKYSNTPAFKYLVIGEAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
           A GYT++ ++LS + L WRLIVILD V T +LTSSISAALAIA+VGKKGN+HAGWLPICG
Sbjct: 61  AGGYTVISILLSFKGLFWRLIVILDMVTTVLLTSSISAALAIAQVGKKGNTHAGWLPICG 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP 163
           QVP FCD+VT AL+ GF AAI+Y +LL+ SLY  L P+F   P
Sbjct: 121 QVPDFCDYVTIALIAGFAAAIIYFVLLLCSLYVVLSPIFVATP 163

Populus trichocarpa (taxid: 3694)

>sp|B9RZ92|CSPL2_RICCO CASP-like protein RCOM_0936380 OS=Ricinus communis GN=RCOM_0936380 PE=3 SV=1

 Score =  212 bits (539), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 128/159 (80%)

Query: 5   KRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGY 64
           K++ + +LR +AL ATV A++VM+ SH SA V NLTF+AK++N P FKYFV+AE IA  Y
Sbjct: 6   KKVFSTILRFLALAATVVAVIVMIRSHDSAIVLNLTFSAKYNNTPAFKYFVIAEGIASVY 65

Query: 65  TLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPK 124
           T++V+ L S+ LL RLIVILD V T +LTSSISAALAIA+VGKKGNSHAGWLP+CGQVPK
Sbjct: 66  TIIVIFLWSKGLLGRLIVILDMVTTVLLTSSISAALAIAQVGKKGNSHAGWLPVCGQVPK 125

Query: 125 FCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP 163
           FCD    ALV GFVAAIVY +LL+ SL++ L P+F VKP
Sbjct: 126 FCDQAIIALVAGFVAAIVYFMLLLCSLHAVLTPIFAVKP 164

Ricinus communis (taxid: 3988)

>sp|B9RW00|CSPL6_RICCO CASP-like protein RCOM_1174750 OS=Ricinus communis GN=RCOM_1174750 PE=2 SV=1

 Score =  194 bits (494), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/158 (56%), Positives = 118/158 (74%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M   KR+ T LLRLIA G  + A +VM TSH+S   F +++ AK+S+ P FKYFV+  AI
Sbjct: 1   MAKAKRVFTLLLRLIAFGTALVAAIVMATSHESGSFFTVSYEAKYSDTPAFKYFVIVNAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
              Y+ + L L S SLLWRL+++ D V T ++TSSISAA+A+A+VGKKGNSHAGWLPICG
Sbjct: 61  VTVYSFLALFLPSESLLWRLVIVTDVVFTMLVTSSISAAVAVAQVGKKGNSHAGWLPICG 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPV 158
           QVPKFCD VTGAL   F++ I YA+LL++S+++ L P+
Sbjct: 121 QVPKFCDQVTGALAAAFISLITYAILLLYSIHTVLNPL 158

Ricinus communis (taxid: 3988)

>sp|A7R333|CSPLB_VITVI CASP-like protein GSVIVT00013434001 OS=Vitis vinifera GN=GSVIVT00013434001 PE=3 SV=1

 Score =  190 bits (483), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 96/157 (61%), Positives = 121/157 (77%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M   KRIIT L+RL+ LGA ++A +VMVTSH SAEV NL+F AK++N   F YF +  AI
Sbjct: 1   MAKIKRIITTLVRLLVLGAALSATIVMVTSHDSAEVLNLSFDAKYTNARAFVYFAITNAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
           A GY+ + L LS  + LW L+ +LD  MT +LTSSIS ALAIA VGKKGNSHAGWLP+CG
Sbjct: 61  ASGYSFIALFLSFSTPLWHLVFLLDVFMTLLLTSSISVALAIADVGKKGNSHAGWLPVCG 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGP 157
           QVP+FCDHVTGAL+ GF AA++Y +LL+FS+++ L P
Sbjct: 121 QVPEFCDHVTGALIAGFSAAVLYLVLLLFSIHAVLNP 157

Vitis vinifera (taxid: 29760)

>sp|B9N5U6|CSPL4_POPTR CASP-like protein POPTRDRAFT_270504 OS=Populus trichocarpa GN=POPTRDRAFT_270504 PE=3 SV=2

 Score =  175 bits (444), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 110/149 (73%)

Query: 15  IALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSR 74
           IA GAT+AA+++M TSH+    F L++ AK+S+ P FKYFV+A AI   Y  + L + S 
Sbjct: 15  IAFGATLAAVIIMATSHEKGSFFALSYEAKYSDTPAFKYFVIANAIVTVYGFLALFIPSE 74

Query: 75  SLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALV 134
           S LWRL++ LD V T +L SSISAALA+A+VGKKGNS AGWLP+CGQV K+C+ VTGALV
Sbjct: 75  SPLWRLVLALDLVFTMLLISSISAALAVAQVGKKGNSSAGWLPVCGQVTKYCNQVTGALV 134

Query: 135 CGFVAAIVYALLLVFSLYSALGPVFGVKP 163
            GF+A I Y +LL++S+Y+ L  + G  P
Sbjct: 135 AGFIAIITYIILLLYSIYTFLNSLLGKTP 163

Populus trichocarpa (taxid: 3694)

>sp|A7PJ32|CSPL2_VITVI CASP-like protein VIT_12s0028g03760 OS=Vitis vinifera GN=VIT_12s0028g03760 PE=2 SV=1

 Score =  171 bits (434), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/150 (54%), Positives = 110/150 (73%)

Query: 4   TKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACG 63
           T RI   +LRL+A GAT++A +VM TSH+     +L+  AK+S+ P FKYFV+A AI   
Sbjct: 5   TDRICFLVLRLLAFGATLSAAIVMATSHERTTYLSLSIEAKYSHTPAFKYFVIANAIGSA 64

Query: 64  YTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVP 123
           Y+L++L L S   LW L++  D V+T  LTSSISAAL+IA VGKKGNS+AGWLPIC QVP
Sbjct: 65  YSLLLLFLPSHGSLWPLVIASDVVITMFLTSSISAALSIAYVGKKGNSYAGWLPICDQVP 124

Query: 124 KFCDHVTGALVCGFVAAIVYALLLVFSLYS 153
            +C+HVTGAL  GF+  ++Y +LL +S+Y+
Sbjct: 125 NYCNHVTGALAAGFIGVVLYMVLLQYSIYT 154

Vitis vinifera (taxid: 29760)

>sp|D7KCH2|CSPLE_ARALL CASP-like protein ARALYDRAFT_470341 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470341 PE=3 SV=1

 Score =  166 bits (419), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 114/155 (73%)

Query: 3   MTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIAC 62
           +T+R+   +LR  A  A + A++ M+TS + +  F ++  AK+S+   FKYFV+A AI  
Sbjct: 4   LTQRLGGLVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVT 63

Query: 63  GYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQV 122
            Y+ +VL L   SLLW+ +V+LD ++T +LTSS+SAA+A+A+VGK+GN++AGWLPICGQV
Sbjct: 64  VYSFLVLFLPKESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQV 123

Query: 123 PKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGP 157
           P+FCD +TGAL+ G VA ++Y  LL+FS++  + P
Sbjct: 124 PRFCDQITGALIAGLVALVLYVFLLIFSIHHVVDP 158

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|Q9LR57|CSPL1_ARATH CASP-like protein At1g03700 OS=Arabidopsis thaliana GN=At1g03700 PE=2 SV=1

 Score =  166 bits (419), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 114/155 (73%)

Query: 3   MTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIAC 62
           +T+R+   +LR  A  A + A++ M+TS + +  F ++  AK+S+   FKYFV+A AI  
Sbjct: 4   LTQRLGGLVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVT 63

Query: 63  GYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQV 122
            Y+ +VL L   SLLW+ +V+LD ++T +LTSS+SAA+A+A+VGK+GN++AGWLPICGQV
Sbjct: 64  VYSFLVLFLPKESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQV 123

Query: 123 PKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGP 157
           P+FCD +TGAL+ G VA ++Y  LL+FS++  + P
Sbjct: 124 PRFCDQITGALIAGLVALVLYVFLLIFSIHHVVDP 158

Arabidopsis thaliana (taxid: 3702)

>sp|B9N2D0|CSPLK_POPTR CASP-like protein POPTRDRAFT_670582 OS=Populus trichocarpa GN=POPTRDRAFT_670582 PE=2 SV=1

 Score =  163 bits (413), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/144 (54%), Positives = 106/144 (73%)

Query: 15  IALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSR 74
           IA+GAT+AA+++M TSH+    F +++ AK+++ P FKYFV+A AI   Y  +VL     
Sbjct: 15  IAVGATLAAVIIMATSHEKGTFFAVSYEAKYTDTPAFKYFVIANAIVTVYGFLVLFHPPG 74

Query: 75  SLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALV 134
           S LWRL++ LD V T +L SSISAALA+A+VGK GNS AGWLP+CGQV K+C+ VTGALV
Sbjct: 75  SPLWRLVLALDLVFTMLLISSISAALAVAQVGKNGNSRAGWLPVCGQVTKYCNQVTGALV 134

Query: 135 CGFVAAIVYALLLVFSLYSALGPV 158
            G +A I Y +LL+ S+Y+ L P+
Sbjct: 135 AGLIALITYIILLLHSIYTFLNPL 158

Populus trichocarpa (taxid: 3694)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
224079223	163	predicted protein [Populus trichocarpa]	1.0	1.0	0.668	4e-56
224125324	163	predicted protein [Populus trichocarpa]	1.0	1.0	0.668	5e-56
356519584	160	PREDICTED: CASP-like protein POPTRDRAFT_	0.975	0.993	0.685	3e-55
255556053	164	conserved hypothetical protein [Ricinus	0.975	0.969	0.654	5e-53
255553757	163	conserved hypothetical protein [Ricinus	0.969	0.969	0.563	9e-48
226713182	159	RecName: Full=CASP-like protein GSVIVT00	0.963	0.987	0.611	1e-46
224160996	128	predicted protein [Populus trichocarpa]	0.785	1.0	0.703	2e-46
341958683	171	RecName: Full=CASP-like protein POPTRDRA	0.914	0.871	0.557	6e-42
356517606	163	PREDICTED: CASP-like protein RCOM_117475	0.969	0.969	0.512	2e-41
224121696	159	predicted protein [Populus trichocarpa]	0.871	0.893	0.570	6e-41

>gi|224079223|ref|XP_002305799.1| predicted protein [Populus trichocarpa] gi|341958536|sp|B9H2V1.1|CSPL6_POPTR RecName: Full=CASP-like protein POPTRDRAFT_758901 gi|222848763|gb|EEE86310.1| predicted protein [Populus trichocarpa]

 Score =  222 bits (565), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 109/163 (66%), Positives = 129/163 (79%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M   K+I TN LRL+AL ATV AIV MVTSH SA+V NLTFT K+SN PVFKYFV+AEAI
Sbjct: 1   MAKIKKIFTNFLRLLALAATVVAIVFMVTSHDSAQVLNLTFTVKYSNTPVFKYFVIAEAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
           A GY ++ ++LS +SL WRL+VILD V   +LTSSISAALAIA+VGKKGN+HAGWLP+C 
Sbjct: 61  AGGYIVISILLSFKSLFWRLLVILDMVTAVLLTSSISAALAIAQVGKKGNTHAGWLPVCE 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP 163
           QVP FCD VT AL+ GF AAI+Y +LL+ SLY  L P+F V P
Sbjct: 121 QVPDFCDQVTIALIAGFAAAIIYFVLLLCSLYVVLSPIFVVTP 163

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125324|ref|XP_002329777.1| predicted protein [Populus trichocarpa] gi|341958548|sp|B9N3F4.1|CSPL9_POPTR RecName: Full=CASP-like protein POPTRDRAFT_810994 gi|222870839|gb|EEF07970.1| predicted protein [Populus trichocarpa]

 Score =  222 bits (565), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 109/163 (66%), Positives = 129/163 (79%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M  + +I TN LRL+AL ATV AIV MVTSH SA+V NLTFTAK+SN P FKY V+ EAI
Sbjct: 1   MAKSNKIFTNTLRLLALAATVVAIVFMVTSHDSAQVLNLTFTAKYSNTPAFKYLVIGEAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
           A GYT++ ++LS + L WRLIVILD V T +LTSSISAALAIA+VGKKGN+HAGWLPICG
Sbjct: 61  AGGYTVISILLSFKGLFWRLIVILDMVTTVLLTSSISAALAIAQVGKKGNTHAGWLPICG 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP 163
           QVP FCD+VT AL+ GF AAI+Y +LL+ SLY  L P+F   P
Sbjct: 121 QVPDFCDYVTIALIAGFAAAIIYFVLLLCSLYVVLSPIFVATP 163

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519584|ref|XP_003528452.1| PREDICTED: CASP-like protein POPTRDRAFT_758901-like [Glycine max]

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/159 (68%), Positives = 135/159 (84%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M  TKR++T  LR +A+GAT+AA++VMVTSH+S EVFNLTFTAK+SN+P FKYFVVAEAI
Sbjct: 1   MAKTKRLLTLFLRFLAIGATIAAVIVMVTSHESTEVFNLTFTAKYSNDPAFKYFVVAEAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
           ACGY+L++L   S++ L RL++ILD V+  +LTSS+SAALAIA VGKKGN+HAGWLPICG
Sbjct: 61  ACGYSLILLFTCSQTSLGRLVLILDVVIAMLLTSSVSAALAIAHVGKKGNTHAGWLPICG 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVF 159
           QVPKFCDHVTGALV GF AAI+Y +L+   LYSA  P++
Sbjct: 121 QVPKFCDHVTGALVAGFAAAIIYLILIFCPLYSAQNPLY 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556053|ref|XP_002519061.1| conserved hypothetical protein [Ricinus communis] gi|238055370|sp|B9RZ92.1|CSPL2_RICCO RecName: Full=CASP-like protein RCOM_0936380 gi|223541724|gb|EEF43272.1| conserved hypothetical protein [Ricinus communis]

 Score =  212 bits (539), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 128/159 (80%)

Query: 5   KRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGY 64
           K++ + +LR +AL ATV A++VM+ SH SA V NLTF+AK++N P FKYFV+AE IA  Y
Sbjct: 6   KKVFSTILRFLALAATVVAVIVMIRSHDSAIVLNLTFSAKYNNTPAFKYFVIAEGIASVY 65

Query: 65  TLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPK 124
           T++V+ L S+ LL RLIVILD V T +LTSSISAALAIA+VGKKGNSHAGWLP+CGQVPK
Sbjct: 66  TIIVIFLWSKGLLGRLIVILDMVTTVLLTSSISAALAIAQVGKKGNSHAGWLPVCGQVPK 125

Query: 125 FCDHVTGALVCGFVAAIVYALLLVFSLYSALGPVFGVKP 163
           FCD    ALV GFVAAIVY +LL+ SL++ L P+F VKP
Sbjct: 126 FCDQAIIALVAGFVAAIVYFMLLLCSLHAVLTPIFAVKP 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553757|ref|XP_002517919.1| conserved hypothetical protein [Ricinus communis] gi|288559178|sp|B9RW00.1|CSPL6_RICCO RecName: Full=CASP-like protein RCOM_1174750 gi|223542901|gb|EEF44437.1| conserved hypothetical protein [Ricinus communis]

 Score =  194 bits (494), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 89/158 (56%), Positives = 118/158 (74%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M   KR+ T LLRLIA G  + A +VM TSH+S   F +++ AK+S+ P FKYFV+  AI
Sbjct: 1   MAKAKRVFTLLLRLIAFGTALVAAIVMATSHESGSFFTVSYEAKYSDTPAFKYFVIVNAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
              Y+ + L L S SLLWRL+++ D V T ++TSSISAA+A+A+VGKKGNSHAGWLPICG
Sbjct: 61  VTVYSFLALFLPSESLLWRLVIVTDVVFTMLVTSSISAAVAVAQVGKKGNSHAGWLPICG 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPV 158
           QVPKFCD VTGAL   F++ I YA+LL++S+++ L P+
Sbjct: 121 QVPKFCDQVTGALAAAFISLITYAILLLYSIHTVLNPL 158

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226713182|sp|A7R333.1|CSPLB_VITVI RecName: Full=CASP-like protein GSVIVT00013434001

 Score =  190 bits (483), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/157 (61%), Positives = 121/157 (77%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M   KRIIT L+RL+ LGA ++A +VMVTSH SAEV NL+F AK++N   F YF +  AI
Sbjct: 1   MAKIKRIITTLVRLLVLGAALSATIVMVTSHDSAEVLNLSFDAKYTNARAFVYFAITNAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
           A GY+ + L LS  + LW L+ +LD  MT +LTSSIS ALAIA VGKKGNSHAGWLP+CG
Sbjct: 61  ASGYSFIALFLSFSTPLWHLVFLLDVFMTLLLTSSISVALAIADVGKKGNSHAGWLPVCG 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGP 157
           QVP+FCDHVTGAL+ GF AA++Y +LL+FS+++ L P
Sbjct: 121 QVPEFCDHVTGALIAGFSAAVLYLVLLLFSIHAVLNP 157

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224160996|ref|XP_002338280.1| predicted protein [Populus trichocarpa] gi|222871722|gb|EEF08853.1| predicted protein [Populus trichocarpa]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/128 (70%), Positives = 105/128 (82%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M   K+I TN LRL+AL ATV AIV MVTSH SA+V NLTFT K+SN PVFKYFV+AEAI
Sbjct: 1   MAKIKKIFTNFLRLLALAATVVAIVFMVTSHDSAQVLNLTFTVKYSNTPVFKYFVIAEAI 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
           A GYT++ ++LS +SL WRL+VILD V   +LTSSISAALAIA+VGKKGN+HAGWLP+C 
Sbjct: 61  AGGYTVISVLLSFKSLFWRLLVILDMVTAVLLTSSISAALAIAQVGKKGNTHAGWLPVCE 120

Query: 121 QVPKFCDH 128
           QVP FCD 
Sbjct: 121 QVPDFCDQ 128

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|341958683|sp|B9N5U6.2|CSPL4_POPTR RecName: Full=CASP-like protein POPTRDRAFT_270504

 Score =  175 bits (444), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 110/149 (73%)

Query: 15  IALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSR 74
           IA GAT+AA+++M TSH+    F L++ AK+S+ P FKYFV+A AI   Y  + L + S 
Sbjct: 15  IAFGATLAAVIIMATSHEKGSFFALSYEAKYSDTPAFKYFVIANAIVTVYGFLALFIPSE 74

Query: 75  SLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALV 134
           S LWRL++ LD V T +L SSISAALA+A+VGKKGNS AGWLP+CGQV K+C+ VTGALV
Sbjct: 75  SPLWRLVLALDLVFTMLLISSISAALAVAQVGKKGNSSAGWLPVCGQVTKYCNQVTGALV 134

Query: 135 CGFVAAIVYALLLVFSLYSALGPVFGVKP 163
            GF+A I Y +LL++S+Y+ L  + G  P
Sbjct: 135 AGFIAIITYIILLLYSIYTFLNSLLGKTP 163

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517606|ref|XP_003527478.1| PREDICTED: CASP-like protein RCOM_1174750-like [Glycine max]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 116/158 (73%)

Query: 1   MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
           M  T++    LLR +   AT+AA+++M TSH++A +F +TF AK++N P FKYFV A ++
Sbjct: 1   MDKTRKACHLLLRFLVFLATLAAVILMATSHETATIFTVTFEAKYTNSPAFKYFVTAYSV 60

Query: 61  ACGYTLVVLILSSRSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICG 120
              Y  +VL L ++SLLW+L+V LD + T ++ SS SA+LAIA+VGKKGNS AGWLPICG
Sbjct: 61  ITVYGFLVLFLPAKSLLWKLVVALDLLFTMLVVSSFSASLAIAQVGKKGNSDAGWLPICG 120

Query: 121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGPV 158
            VPK+CD VT AL+ GF+A I+Y +LL+ S+ + + P+
Sbjct: 121 SVPKYCDQVTRALIAGFIAMIIYIILLLHSINTVIDPL 158

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121696|ref|XP_002330630.1| predicted protein [Populus trichocarpa] gi|222872234|gb|EEF09365.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (435), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 81/142 (57%), Positives = 107/142 (75%)

Query: 15  IALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLILSSR 74
           IA GAT+AA+++M TSH+    F L++ AK+S+ P FKYFV+A AI   Y  + L + S 
Sbjct: 15  IAFGATLAAVIIMATSHEKGSFFALSYEAKYSDTPAFKYFVIANAIVTVYGFLALFIPSE 74

Query: 75  SLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALV 134
           S LWRL++ LD V T +L SSISAALA+A+VGKKGNS AGWLP+CGQV K+C+ VTGALV
Sbjct: 75  SPLWRLVLALDLVFTMLLISSISAALAVAQVGKKGNSSAGWLPVCGQVTKYCNQVTGALV 134

Query: 135 CGFVAAIVYALLLVFSLYSALG 156
            GF+A I Y +LL++S+Y+ L 
Sbjct: 135 AGFIAIITYIILLLYSIYTFLN 156

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
TAIR|locus:2128776	164	AT4G03540 "AT4G03540" [Arabido	0.950	0.945	0.425	6.9e-31
TAIR|locus:2020773	164	AT1G03700 "AT1G03700" [Arabido	0.950	0.945	0.361	1.9e-26
UNIPROTKB|A2Y2B7	162	BLE3 "CASP-like protein BLE3"	0.932	0.938	0.355	4.2e-24
UNIPROTKB|Q84UT5	162	BLE3 "CASP-like protein BLE3"	0.932	0.938	0.355	4.2e-24
TAIR|locus:2117308	170	AT4G25040 "AT4G25040" [Arabido	0.877	0.841	0.292	5.4e-15
TAIR|locus:2130479	193	AT4G15610 "AT4G15610" [Arabido	0.871	0.735	0.324	7.9e-14
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.907	0.791	0.238	3.9e-12
TAIR|locus:2080742	204	CASP2 "AT3G11550" [Arabidopsis	0.858	0.686	0.281	3.9e-12
TAIR|locus:2160747	202	CASP4 "AT5G06200" [Arabidopsis	0.901	0.727	0.294	3.9e-12
TAIR|locus:2035791	209	AT1G14160 "AT1G14160" [Arabido	0.877	0.684	0.269	5e-12

TAIR|locus:2128776 AT4G03540 "AT4G03540" [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 66/155 (42%), Positives = 93/155 (60%)

Query:     3 MTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIAC 62
             +TKRI   +LRL A GA +AA++VM+TS + A    ++  AK+++   FKYFV+A A+  
Sbjct:     4 LTKRIGGLVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVS 63

Query:    63 GYTXXXXXXXXXXXXXXXXXXXDAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWLPICGQV 122
              Y+                   D VM               +VGKKGN++AGWLPICGQV
Sbjct:    64 VYSFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQV 123

Query:   123 PKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGP 157
             PKFCD +TGAL+ GFVA ++Y LLL++SL++ + P
Sbjct:   124 PKFCDQITGALIAGFVALVLYVLLLLYSLHAVVDP 158

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2020773 AT1G03700 "AT1G03700" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 56/155 (36%), Positives = 87/155 (56%)

Query:     3 MTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIAC 62
             +T+R+   +LR  A  A + A++ M+TS + +  F ++  AK+S+   FKYFV+A AI  
Sbjct:     4 LTQRLGGLVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVT 63

Query:    63 GYTXXXXXXXXXXXXXXXXXXXDAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWLPICGQV 122
              Y+                   D ++               +VGK+GN++AGWLPICGQV
Sbjct:    64 VYSFLVLFLPKESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQV 123

Query:   123 PKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGP 157
             P+FCD +TGAL+ G VA ++Y  LL+FS++  + P
Sbjct:   124 PRFCDQITGALIAGLVALVLYVFLLIFSIHHVVDP 158

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|A2Y2B7 BLE3 "CASP-like protein BLE3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 54/152 (35%), Positives = 78/152 (51%)

Query:     1 MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
             M    R++  +LRL A  A   A VVMVTS ++   F +   AK+S  P F +FVVA A+
Sbjct:     1 MAKVHRLMNAVLRLAAAAAAATAAVVMVTSRETTSFFGIQMEAKYSYTPSFIFFVVAYAV 60

Query:    61 ACGYTXXXXXXXXXXXXXXXXXXXDAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWLPICG 120
             A  Y+                   D V+                + K GNSHAGWLP+CG
Sbjct:    61 AAAYSLLVLAVPAGSALSRLALTTDVVLGMVLAGAVASAGAISDIAKNGNSHAGWLPVCG 120

Query:   121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLY 152
             Q+  +C+HV  AL+ GFVA  V+ +++++SL+
Sbjct:   121 QIHAYCNHVMAALIAGFVALAVHFVVVMYSLH 152

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS

UNIPROTKB|Q84UT5 BLE3 "CASP-like protein BLE3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 54/152 (35%), Positives = 78/152 (51%)

Query:     1 MTMTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAI 60
             M    R++  +LRL A  A   A VVMVTS ++   F +   AK+S  P F +FVVA A+
Sbjct:     1 MAKVHRLMNAVLRLAAAAAAATAAVVMVTSRETTSFFGIQMEAKYSYTPSFIFFVVAYAV 60

Query:    61 ACGYTXXXXXXXXXXXXXXXXXXXDAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWLPICG 120
             A  Y+                   D V+                + K GNSHAGWLP+CG
Sbjct:    61 AAAYSLLVLAVPAGSALSRLALTTDVVLGMVLAGAVASAGAISDIAKNGNSHAGWLPVCG 120

Query:   121 QVPKFCDHVTGALVCGFVAAIVYALLLVFSLY 152
             Q+  +C+HV  AL+ GFVA  V+ +++++SL+
Sbjct:   121 QIHAYCNHVMAALIAGFVALAVHFVVVMYSLH 152

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0035264 "multicellular organism growth" evidence=IMP

TAIR|locus:2117308 AT4G25040 "AT4G25040" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 43/147 (29%), Positives = 66/147 (44%)

Query:    12 LRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTXXXXX- 70
             +R++ +GA +A++ VM+T+ + A V+ + F AK+S    F+Y V A+   C  T      
Sbjct:    21 MRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCAATLFTLVW 80

Query:    71 ---XXXXXXXXXXXXXXDAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWLPICGQVPKFCD 127
                              D +                 VGK GN  AGWLPICG V  +C 
Sbjct:    81 ACLAVRRRGLVFALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAGWLPICGYVHGYCS 140

Query:   128 HVTGALVCGFVAAIVYALLLVFSLYSA 154
              VT +L   F + I+  +L V +  +A
Sbjct:   141 RVTISLAMSFASFILLFILTVLTASAA 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130479 AT4G15610 "AT4G15610" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 51/157 (32%), Positives = 68/157 (43%)

Query:    11 LLRLIALGATVAAIVVMVTSHQSAEVFNLTFT------AKFSNEPVFKYFVVAEAIACGY 64
             +LR +   AT+ +IVVMVTS Q+  +F L  T      A+F+N P   YFVVA ++AC Y
Sbjct:    32 VLRFVLFAATLTSIVVMVTSKQTKNIF-LPGTPIRIPAAEFTNSPALIYFVVALSVACFY 90

Query:    65 TXXXXXXXXXXXXXXXXXXX--------DAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWL 116
             +                           DAVM                +G KGN    W 
Sbjct:    91 SIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWG 150

Query:   117 PICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYS 153
              IC    KFC HV GA+     A++V  LL + S+ S
Sbjct:   151 KICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLS 187

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 38/159 (23%), Positives = 70/159 (44%)

Query:     3 MTKRI--ITNLLRLIALGATVAAIVVMVTSHQSAEVFN--LTFTAKFSNEPVFKYFVVAE 58
             M++RI  +  +LR++A   T+ + ++M T+H++   F   + F A++++ P   +FVVA 
Sbjct:    21 MSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVAN 80

Query:    59 AIACGYTXXXXXXXXXXXXXXXXXXX-------DAVMXXXXXXXXXXXXXXXRVGKKGNS 111
             A+  GY                           D  M                +   GN+
Sbjct:    81 AVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNN 140

Query:   112 HAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFS 150
                W  IC Q   FC+ ++G+L+  F+A ++  LL++ S
Sbjct:   141 KTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLS 179

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2080742 CASP2 "AT3G11550" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 42/149 (28%), Positives = 62/149 (41%)

Query:    11 LLRLIALGATVAAIVVMVTSHQSAEVFN--LTFTAKFSNEPVFKYFVVAEAIACGYTXXX 68
             LLRL A+ A +AA   M TS ++   F   L F A + + P F++FV+A A+  GY    
Sbjct:    49 LLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLS 108

Query:    69 XXXXXXXXXXXXXXX-------XDAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWLPICGQ 121
                                    D  +                +   GN +  WLPIC Q
Sbjct:   109 LPISVVTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQ 168

Query:   122 VPKFCDHVTGALVCGFVAAIVYALLLVFS 150
                FC   +GA+V  FV+ + + +L+V S
Sbjct:   169 FGDFCQKSSGAVVSAFVSVVFFTILVVIS 197

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2160747 CASP4 "AT5G06200" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 46/156 (29%), Positives = 62/156 (39%)

Query:    11 LLRLIALGATVAAIVVMVTSHQSAEVFN--LTFTAKFSNEPVFKYFVVAEAIACGYTXXX 68
             LLRL A+ A +AA   M TS ++   F   L F A + + P F++FVVA AI  GY    
Sbjct:    47 LLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLS 106

Query:    69 XXXXXXXXXXXXXXX-------XDAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWLPICGQ 121
                                    D                   +   GN++  WLPIC Q
Sbjct:   107 LPFSVVTIVRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQ 166

Query:   122 VPKFCDHVTGALVCGFVAAIVYALLLVFSLYSALGP 157
                FC   +GA+V  F +    A+L+V S  S   P
Sbjct:   167 FGDFCQKTSGAVVSAFASVTFLAILVVISGVSLKRP 202

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2035791 AT1G14160 "AT1G14160" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 41/152 (26%), Positives = 67/152 (44%)

Query:    11 LLRLIALGATVAAIVVMVTSHQSAEVFN--LTFTAKFSNEPVFKYFVVAEAIACGY---- 64
             +LRL A+  T+ + + M T+H+S    +  +    K+S+ P   +FVVA AI+ GY    
Sbjct:    54 VLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAISGGYLVLS 113

Query:    65 ---TXXXXXXXXXXXXXXXXXXXDAVMXXXXXXXXXXXXXXXRVGKKGNSHAGWLPICGQ 121
                +                   D VM                +  +GN+ A W PIC Q
Sbjct:   114 LPVSIFHIFSTQAKTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTANWPPICQQ 173

Query:   122 VPKFCDHVTGALVCGFVAAIVYALLLVFSLYS 153
                FC+ ++G+L+  F A I+  L+++ S  S
Sbjct:   174 FDGFCERISGSLIGSFCAVILLMLIVINSAIS 205

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B9RW00	CSPL6_RICCO	No assigned EC number	0.5632	0.9693	0.9693	N/A	no
Q84UT5	BLE3_ORYSJ	No assigned EC number	0.4342	0.9325	0.9382	yes	no
D7M2M8	CSPLF_ARALL	No assigned EC number	0.5839	0.8404	0.8353	N/A	no
B9RZ92	CSPL2_RICCO	No assigned EC number	0.6540	0.9754	0.9695	N/A	no
B9H2V1	CSPL6_POPTR	No assigned EC number	0.6687	1.0	1.0	yes	no
A7R333	CSPLB_VITVI	No assigned EC number	0.6114	0.9631	0.9874	yes	no
A7PJ32	CSPL2_VITVI	No assigned EC number	0.5466	0.9202	0.9316	yes	no
Q9LR57	CSPL1_ARATH	No assigned EC number	0.4838	0.9509	0.9451	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_scaffold_124000016 hypothetical protein (163 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	163
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	1e-37
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	4e-35

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score =  125 bits (317), Expect = 1e-37
 Identities = 73/152 (48%), Positives = 94/152 (61%), Gaps = 9/152 (5%)

Query: 12  LRLIALGATVAAIVVMVTSHQSAEVF--NLTFTAKFSNEPVFKYFVVAEAIACGYTLVVL 69
           LR++A  AT+AA +VM T+ ++  VF   +TF AKFS+ P F YFVVA AIACGY+L+ L
Sbjct: 3   LRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSL 62

Query: 70  ILSSRSLLWR-------LIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQV 122
           ++S   LL R        +  LD VM A+L+S  SAA A+A VGK GN  AGWL ICG  
Sbjct: 63  VVSIFGLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVF 122

Query: 123 PKFCDHVTGALVCGFVAAIVYALLLVFSLYSA 154
            KFCD + G+L     A I+  LL + S  S 
Sbjct: 123 GKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  119 bits (300), Expect = 4e-35
 Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 9/141 (6%)

Query: 11  LLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLI 70
           +LRL A    +AA VVM T+ Q+   F +   A FS+ P F+Y VVA AIA GY+L+ L+
Sbjct: 10  VLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIAAGYSLLQLV 69

Query: 71  LSSRSL---------LWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQ 121
           LS   L         L  L+ ILD VM  +L ++ SAA AI  + + GNSHA W+ IC Q
Sbjct: 70  LSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNSHANWMKICNQ 129

Query: 122 VPKFCDHVTGALVCGFVAAIV 142
             +FC+    ++   F+A ++
Sbjct: 130 FGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	163
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.49

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=1.8e-45  Score=284.15  Aligned_cols=145  Identities=48%  Similarity=0.772  Sum_probs=137.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccccceeee--eeeeeEecccchHHHHHHHHHHHHHHHHHHHHh------hccc-hHHHH
Q 047574           10 NLLRLIALGATVAAIVVMVTSHQSAEVFN--LTFTAKFSNEPVFKYFVVAEAIACGYTLVVLIL------SSRS-LLWRL   80 (163)
Q Consensus        10 l~LR~~a~~~sl~a~~vM~t~~q~~~~~~--~~~~~~f~~~~af~ylv~an~i~~~Ysllql~~------~~~~-~~~~~   80 (163)
                      ++||+++++++++|+++|+||+|+.++++  +++++||+|+++|+|+|++|+|+++|+++|++.      ++++ ...|+
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~~~~~   80 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFFKLIA   80 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence            47999999999999999999999999988  899999999999999999999999999999987      2222 34799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047574           81 IVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLVFSLYSA  154 (163)
Q Consensus        81 ~f~~Dqv~ayLl~saaaAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsf~A~~~~~~~s~lSa~~l  154 (163)
                      +|.+||+++|+++||++||+++++++|+||+|.+|+|+|+++++||||+++|++++|+|++++++++++|++++
T Consensus        81 ~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        81 LFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999975

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=6.4e-40  Score=251.17  Aligned_cols=140  Identities=43%  Similarity=0.721  Sum_probs=131.6

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeeeEecccchHHHHHHHHHHHHHHHHHHHHh------hc---
Q 047574            3 MTKRIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLIL------SS---   73 (163)
Q Consensus         3 ~~~~~~~l~LR~~a~~~sl~a~~vM~t~~q~~~~~~~~~~~~f~~~~af~ylv~an~i~~~Ysllql~~------~~---   73 (163)
                      |+.+..+++||+++++++++|+++|++|+|+.++.+++.++||+|+++|+|++++|+|+++|+++|++.      ++   
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~~~   80 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGKLR   80 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            467899999999999999999999999999999988899999999999999999999999999999986      11   


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCcccccCCccchhhhHHHHHHHHHHHHHH
Q 047574           74 RSLLWRLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIV  142 (163)
Q Consensus        74 ~~~~~~~~f~~Dqv~ayLl~saaaAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsf~A~~~  142 (163)
                      ++...|++|++||+++|+++||++||+++++++++||++.+|+++|+.+++||+|+++|++++|+|+++
T Consensus        81 ~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   81 SKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            224688999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.49  E-value=6e-06  Score=61.10  Aligned_cols=134  Identities=18%  Similarity=0.167  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeeeEecccchHHHHHHHHHHHHHHHHHHHHh---h--c--cchHH
Q 047574            6 RIITNLLRLIALGATVAAIVVMVTSHQSAEVFNLTFTAKFSNEPVFKYFVVAEAIACGYTLVVLIL---S--S--RSLLW   78 (163)
Q Consensus         6 ~~~~l~LR~~a~~~sl~a~~vM~t~~q~~~~~~~~~~~~f~~~~af~ylv~an~i~~~Ysllql~~---~--~--~~~~~   78 (163)
                      |..+.++|+++++++++...+++....+..      .......++..|.+.+.++...+++.-+..   +  .  +....
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~   76 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGS------QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFSLKYRPRIPWP   76 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhccc------cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            446789999999999999999998764221      124566777889999999998888776655   1  1  12335


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCcccccCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 047574           79 RLIVILDAVMTAVLTSSISAALAIARVGKKGNSHAGWLPICGQVPKFCDHVTGALVCGFVAAIVYALLLV  148 (163)
Q Consensus        79 ~~~f~~Dqv~ayLl~saaaAA~~i~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsf~A~~~~~~~s~  148 (163)
                      +..+..|.+++.+-+.+...-+.-....+.+++   +++.+...++-|+...++.++++++++.+..+.+
T Consensus        77 ~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   77 LVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            588999999999988876555432211112211   2334455567899999999999999999987754

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00