Citrus Sinensis ID: 047612

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MSENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESEKDES
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
msenprarynnddnvaSFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLlfaptwftpfeqTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRgrlgewemtegvevteSNLRASLESLVANADMLRTTTTAKVVEIldplqnvkfFTAVARLQLRIRRWAshgesekdes
Flexible Loop (DISEMBL)
msenprarynnddnvasFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLadeqrqrmdslsvetrveEKLLNDElariqesvagptimeLARRrgrlgewemtegvevtesnlRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRrwashgesekdes
Low Complexity Region (SEG)
MSENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESEKDES
Disordered region (IsUnstruct)
**************VASFETFFRAWLVRQEHLLDELIS*************KELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNES************************************************************************ESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWA**********
Disordered Region (DISOPRED)
*******************TFFRAWLVRQEHLLDELISAQ*******DEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVN***************S******************IQESVAGPTIMEL*********************NLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRR************
Disordered Region (DISEMBL)
********YNNDDNVASFETFFRAWLVRQEHLLDELISAQ**********LKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWA**********
Disordered Region (DISPRO)
**************VASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGES*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVxxxxxxxxxxxxxxxxxxxxxTRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESEKDES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	238	2.2.26 [Sep-21-2011]
Q93ZE2	368	Transcription factor TGA7	no	no	0.873	0.565	0.305	3e-17
Q39163	330	Transcription factor TGA5	no	no	0.920	0.663	0.256	8e-17
Q39234	384	Transcription factor TGA3	no	no	0.894	0.554	0.290	4e-15
Q39140	330	Transcription factor TGA6	no	no	0.920	0.663	0.239	4e-14
P23923	332	Transcription factor HBP-	N/A	no	0.840	0.602	0.215	6e-14
Q39162	364	Transcription factor TGA4	no	no	0.886	0.579	0.272	9e-14
Q39237	368	Transcription factor TGA1	no	no	0.878	0.567	0.270	1e-13
P43273	330	Transcription factor TGA2	no	no	0.903	0.651	0.234	2e-13
O24160	456	TGACG-sequence-specific D	N/A	no	0.886	0.462	0.239	9e-13
Q41558	476	Transcription factor HBP-	N/A	no	0.949	0.474	0.219	1e-12

>sp|Q93ZE2|TGA7_ARATH Transcription factor TGA7 OS=Arabidopsis thaliana GN=TGA7 PE=1 SV=1

 Score = 88.6 bits (218), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 8/216 (3%)

Query: 14  NVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVA 73
            +ASFE  +  WL  Q   + EL +A ++H    D +LK LV+  L HY   +Q KS  A
Sbjct: 151 GIASFEMEYSHWLQEQSRRVSELRTALQSH--ISDIELKMLVESCLNHYANLFQMKSDAA 208

Query: 74  QHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVE 133
           + +VF L +  W T  E+ F WI GF P+    VV   ++ L D+Q   + +L   ++  
Sbjct: 209 KADVFYLISGMWRTSTERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQQA 268

Query: 134 EKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADML 193
           E  L+  + ++Q+S+A   +++            M   +E    NL+A LE  V  AD L
Sbjct: 269 EDALSQGIDKLQQSLAESIVIDAVIESTHYPT-HMAAAIE----NLQA-LEGFVNQADHL 322

Query: 194 RTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
           R  T  ++ +IL   Q+ +   A+     R+R  +S
Sbjct: 323 RQQTLQQMAKILTTRQSARGLLALGEYLHRLRALSS 358

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1.
Arabidopsis thaliana (taxid: 3702)

>sp|Q39163|TGA5_ARATH Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2

 Score = 87.4 bits (215), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 15/234 (6%)

Query: 2   SENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAH 61
           S   +A     D   +F+  +R W   +   + EL SA ++H  + D +L+ +V  V+AH
Sbjct: 98  SSGDQAHSTAGDGAMAFDVEYRRWQEDKNRQMKELSSAIDSH--ATDSELRIIVDGVIAH 155

Query: 62  YQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQ 121
           Y++ Y+ K   A+ +VF L +  W TP E+ F W+ GF  +   +++   ++ L ++Q  
Sbjct: 156 YEELYRIKGNAAKSDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSL 215

Query: 122 RMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRR------GRLGEWEMTEGVEVT 175
            +++L   ++  E  L+  +  +Q+S+A                   +G+  M  G   T
Sbjct: 216 DINNLQQSSQQAEDALSQGMDNLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGT 275

Query: 176 ESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
                  LE  +  AD LR  T  ++V +L   Q+ +   AV    LR+R  +S
Sbjct: 276 -------LEGFIRQADNLRLQTYQQMVRLLTTRQSARALLAVHNYTLRLRALSS 322

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39234|TGA3_ARATH Transcription factor TGA3 OS=Arabidopsis thaliana GN=TGA3 PE=1 SV=1

 Score = 81.6 bits (200), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 7/220 (3%)

Query: 10  NNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEK 69
           N +  +A+FE  +  WL  Q   + E+ +A + H    D +LK LV   L HY   ++ K
Sbjct: 162 NMNSGIAAFEMEYTHWLEEQNRRVSEIRTALQAH--IGDIELKMLVDSCLNHYANLFRMK 219

Query: 70  SKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVE 129
           +  A+ +VF L +  W T  E+ F WI GF P+    VV   V+ L D+Q   + +L   
Sbjct: 220 ADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVVMPYVEPLTDQQLLEVRNLQQS 279

Query: 130 TRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVAN 189
           ++  E+ L+  L ++Q+ +     +++           M   +E    NL+A LES V  
Sbjct: 280 SQQAEEALSQGLDKLQQGLVESIAIQIKVVESVNHGAPMASAME----NLQA-LESFVNQ 334

Query: 190 ADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
           AD LR  T  ++ +IL   Q  +   A+     R+R  +S
Sbjct: 335 ADHLRQQTLQQMSKILTTRQAARGLLALGEYFHRLRALSS 374

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39140|TGA6_ARATH Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 15/234 (6%)

Query: 2   SENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAH 61
           S   +A     +   +F+     WL  +   ++EL SA   H  + D +L+ +V  V+AH
Sbjct: 98  SSGDQAHSTGGNGALAFDAEHSRWLEEKNRQMNELRSALNAH--AGDTELRIIVDGVMAH 155

Query: 62  YQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQ 121
           Y++ ++ KS  A+++VF L +  W TP E+ F W+ GF  +   +++   ++ + + Q  
Sbjct: 156 YEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVM 215

Query: 122 RMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRR------GRLGEWEMTEGVEVT 175
            ++SL   ++  E  L+  +  +Q+S+A                   +G+  M  G   T
Sbjct: 216 GINSLQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSDNVASYMGQMAMAMGQLGT 275

Query: 176 ESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
                  LE  +  AD LR  T  +++ +L   Q+ +   A+     R+R  +S
Sbjct: 276 -------LEGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDYSSRLRALSS 322

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|P23923|HBP1B_WHEAT Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1

 Score = 77.8 bits (190), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 112/237 (47%), Gaps = 37/237 (15%)

Query: 11  NDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKS 70
           + +   +F+T +  WL      ++EL +A   H  + D +L+ +V+++++HY + +++K 
Sbjct: 107 SGNGALAFDTEYARWLEEHNRQVNELRAAVNAH--AGDTELRSVVEKIMSHYDEIFKQKG 164

Query: 71  KVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVET 130
             A+ +VF + +  W TP E+ F W+ GF P+   ++++  ++ L ++Q   + +L   +
Sbjct: 165 NAAKADVFHVLSGMWKTPAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGICNLQQSS 224

Query: 131 RVEEKLLNDELARIQESVA------------------GPTIMELARRRGRLGEWEMTEGV 172
           +  E  L+  +  +Q+S+A                     + ++A   G+LG        
Sbjct: 225 QQAEDALSQGMEALQQSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLG-------- 276

Query: 173 EVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
                    +LE+ ++ AD LR  T  ++  IL   Q+ +    ++    R+R  +S
Sbjct: 277 ---------TLENFLSQADNLRQQTLQQMQRILTTRQSARALLVISDYSSRLRALSS 324

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Triticum aestivum (taxid: 4565)

>sp|Q39162|TGA4_ARATH Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2

 Score = 77.4 bits (189), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 9/220 (4%)

Query: 10  NNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEK 69
           N    + +FE  +  W+  Q   + EL +    H Q  D +L+ LV+  + HY Q ++ K
Sbjct: 144 NMSSGIVAFEMEYGHWVEEQNRQICELRTVL--HGQVSDIELRSLVENAMKHYFQLFRMK 201

Query: 70  SKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVE 129
           S  A+ +VF + +  W T  E+ F WI GF P+   +V+      L D+Q   + +L   
Sbjct: 202 SAAAKIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNLRQS 261

Query: 130 TRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVAN 189
            +  E  L+  + ++Q ++A           G+LGE      +      L A L S V  
Sbjct: 262 CQQAEDALSQGMEKLQHTLAESVAA------GKLGEGSYIPQMTCAMERLEA-LVSFVNQ 314

Query: 190 ADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
           AD LR  T  ++  IL   Q  +   A+     R+R  +S
Sbjct: 315 ADHLRHETLQQMHRILTTRQAARGLLALGEYFQRLRALSS 354

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39237|TGA1_ARATH Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2

 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 9/218 (4%)

Query: 12  DDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSK 71
           +  +A+FE  +  W+  Q   + EL +    H    D +L+ LV+  + HY + ++ KS 
Sbjct: 150 NPGIAAFEMEYGHWVEEQNRQICELRTVLHGH--INDIELRSLVENAMKHYFELFRMKSS 207

Query: 72  VAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETR 131
            A+ +VF + +  W T  E+ F WI GF P+   +V+      L D+Q   + +L    +
Sbjct: 208 AAKADVFFVMSGMWRTSAERFFLWIGGFRPSDLLKVLLPHFDVLTDQQLLDVCNLKQSCQ 267

Query: 132 VEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANAD 191
             E  L   + ++Q ++A           G+LGE      V      L A L S V  AD
Sbjct: 268 QAEDALTQGMEKLQHTLADCVAA------GQLGEGSYIPQVNSAMDRLEA-LVSFVNQAD 320

Query: 192 MLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
            LR  T  ++  IL   Q  +   A+     R+R  +S
Sbjct: 321 HLRHETLQQMYRILTTRQAARGLLALGEYFQRLRALSS 358

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|P43273|TGA2_ARATH Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1

 Score = 75.9 bits (185), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 15/230 (6%)

Query: 6   RARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQY 65
           +A     +   +F+     WL  +   ++EL SA   H  + D +L+ +V  V+AHY++ 
Sbjct: 102 QAHSTGGNGALAFDAEHSRWLEEKNKQMNELRSALNAH--AGDSELRIIVDGVMAHYEEL 159

Query: 66  YQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDS 125
           ++ KS  A+++VF L +  W TP E+ F W+ GF  +   +++   ++ + + Q   +++
Sbjct: 160 FRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINN 219

Query: 126 LSVETRVEEKLLNDELARIQESVAGPTIMELARRR------GRLGEWEMTEGVEVTESNL 179
           L   ++  E  L+  +  +Q+S+A                   +G+  M  G   T    
Sbjct: 220 LQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGT---- 275

Query: 180 RASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
              LE  +  AD LR  T  +++ +L   Q+ +   A+     R+R  +S
Sbjct: 276 ---LEGFIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDYFSRLRALSS 322

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the C-boxes (5'-ATGACGTCAT-3') with high affinity.

Arabidopsis thaliana (taxid: 3702)

>sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1

 Score = 73.9 bits (180), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 2/213 (0%)

Query: 17  SFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHN 76
           +F+  +  WL      ++EL +A   H  + D +L+ +V  V AH+ + ++ K   A+ +
Sbjct: 235 AFDAEYSRWLEEHNKHINELRTAVNAH--ASDPELRSIVNNVTAHFDEVFRVKGNAAKAD 292

Query: 77  VFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKL 136
           VF + +  W TP E+ F WI GF P+   +++   ++ L ++Q   + +L   +   E  
Sbjct: 293 VFHVLSGMWKTPAERCFMWIGGFRPSELLKLLVNQLEPLTEQQLAGIYNLQQSSHQAEDA 352

Query: 137 LNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLRTT 196
           L+  +  +Q+S+A           G  G+     G          +LE  +  AD LR  
Sbjct: 353 LSQGMEALQQSLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNLRQQ 412

Query: 197 TTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
           T  ++  +L   Q+ +   A+     R+R  +S
Sbjct: 413 TLQQMHRVLTTRQSARALLAINEYFSRLRALSS 445

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.

Nicotiana tabacum (taxid: 4097)

>sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 107/228 (46%), Gaps = 2/228 (0%)

Query: 2   SENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAH 61
           S   +++  + +   +F+  +  WL      ++EL +A   H  + D+DL+++V  +++ 
Sbjct: 243 SSGDQSQSASGNGAVAFDMEYARWLEEHNKHINELRAAANAH--AGDDDLRKIVDSIMSQ 300

Query: 62  YQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQ 121
           Y ++++ K   A+ +VF + +  W TP E+ F W+ GF  +   +++   ++ L ++Q  
Sbjct: 301 YDEFFRLKGVAAKADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLLAGQLEPLTEQQLT 360

Query: 122 RMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRA 181
            + +L   ++  E  L+  +  +Q+S+A           G  G      G          
Sbjct: 361 GICNLQQSSQQAEDALSQGMEALQQSLAETLASGSLGPAGSSGNVASYMGQMAMAMGKLG 420

Query: 182 SLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
           +LE+ +  AD LR  T  ++  IL   Q+ +   A++    R+R  +S
Sbjct: 421 TLENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSS 468

Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Triticum aestivum (taxid: 4565)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
255582666	232	Transcription factor HBP-1b, putative [R	0.936	0.961	0.526	2e-62
225439404	231	PREDICTED: transcription factor TGA4-lik	0.911	0.939	0.513	2e-60
356566686	232	PREDICTED: TGACG-sequence-specific DNA-b	0.911	0.935	0.493	3e-58
356523320	233	PREDICTED: transcription factor HBP-1b(c	0.932	0.952	0.475	9e-58
449440257	235	PREDICTED: transcription factor TGA7-lik	0.920	0.931	0.444	8e-51
225448465	240	PREDICTED: TGACG-sequence-specific DNA-b	0.932	0.925	0.432	4e-42
225448463	237	PREDICTED: transcription factor TGA3-lik	0.890	0.894	0.418	1e-38
449461405	230	PREDICTED: transcription factor TGA4-lik	0.899	0.930	0.376	2e-35
255537882	199	Transcription factor HBP-1b, putative [R	0.743	0.889	0.393	5e-34
225448467	243	PREDICTED: TGACG-sequence-specific DNA-b	0.899	0.880	0.388	5e-32

>gi|255582666|ref|XP_002532112.1| Transcription factor HBP-1b, putative [Ricinus communis] gi|223528215|gb|EEF30274.1| Transcription factor HBP-1b, putative [Ricinus communis]

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 119/226 (52%), Positives = 165/226 (73%), Gaps = 3/226 (1%)

Query: 1   MSENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLA 60
           +    R+  +      SF +FF  WLVRQEH LDEL+S Q++ H+S +EDLKELV R+L+
Sbjct: 5   LGSTSRSTRDGKTIAQSFVSFFEGWLVRQEHYLDELLSVQQHCHESTEEDLKELVSRILS 64

Query: 61  HYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQR 120
           HY+QYY+EKS++ Q NVFL+F+P WF+  EQ+FFWIAGF P+LAFRV++ SV DL+++Q 
Sbjct: 65  HYEQYYEEKSRLVQGNVFLVFSPPWFSSLEQSFFWIAGFKPSLAFRVLSNSVNDLSEDQN 124

Query: 121 QRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGE-WEMTEGVEVTESNL 179
             +  L  ET+V E+LL DE A+IQES+A P +++ AR +GR GE   +++ + V   +L
Sbjct: 125 SEVGRLEKETKVNERLLADEFAKIQESLASPPLLQEARLQGRAGEDGRVSDRLAV--GSL 182

Query: 180 RASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIR 225
           R+ LE++VA AD+LRT T  KV+EIL+ +Q V F TAV RLQLRIR
Sbjct: 183 RSRLEAVVAKADLLRTNTVVKVMEILNSVQKVNFLTAVTRLQLRIR 228

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439404|ref|XP_002263705.1| PREDICTED: transcription factor TGA4-like [Vitis vinifera]

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/218 (51%), Positives = 159/218 (72%), Gaps = 1/218 (0%)

Query: 11  NDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKS 70
           N+ +V  FE F + W+V QEH LDEL++ + N  +  ++++ +LV RVL HYQ YY++KS
Sbjct: 4   NNSSVVLFERFLQRWMVSQEHYLDELLTTERNCGEYGEKEMTDLVSRVLTHYQLYYEQKS 63

Query: 71  KVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVET 130
           +V + NVF++F+P WFTP E+T  WI GF P LAFR+V E+V +L+++QR+RM+ L  ET
Sbjct: 64  RVIERNVFVVFSPPWFTPLERTLLWIGGFKPGLAFRIVAEAVGELSEDQRRRMNELQEET 123

Query: 131 RVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANA 190
           R EE+LL+DELARIQE+VA P +MELAR+ GR  + E+     VTE  L ++LE++V +A
Sbjct: 124 RTEERLLSDELARIQETVAAPPLMELARQAGRRRDGEILGSDSVTEL-LSSALETVVRDA 182

Query: 191 DMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWA 228
           ++LR +T  KVVEIL P+QNVKF  AV R  ++IR W 
Sbjct: 183 ELLRMSTAVKVVEILTPIQNVKFLGAVGRFHMKIRTWG 220

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566686|ref|XP_003551561.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-1A-like [Glycine max]

 Score =  231 bits (588), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 108/219 (49%), Positives = 155/219 (70%), Gaps = 2/219 (0%)

Query: 12  DDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSK 71
           D N  SFE F + W VRQ   LDEL+SAQ+++H+ +D+D+K+L+ RV+ HY QY++EKSK
Sbjct: 3   DANADSFEAFLQGWRVRQRGYLDELLSAQQHYHELQDDDVKQLINRVVCHYGQYFEEKSK 62

Query: 72  VAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETR 131
           +A  NV L+F+P WF+  E+TF W+ GF P +AF+VVN +++ L++EQ++R+  L+ ET+
Sbjct: 63  IAHQNVLLVFSPPWFSSLERTFLWVGGFKPGVAFQVVNAALEVLSEEQKERLSLLNQETK 122

Query: 132 VEEKLLNDELARIQESVAGPTIMELARRRGRL--GEWEMTEGVEVTESNLRASLESLVAN 189
           V+E+ LNDELA++ ESVA P ++++AR  GR+      M EG     S  R +LE+LVAN
Sbjct: 123 VKERALNDELAKLHESVAAPPLVDMARSHGRVCFSRSFMAEGGSSVPSTFRETLENLVAN 182

Query: 190 ADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWA 228
           AD LRT T+ K+ +IL P Q V F  AVA LQ+RI  W 
Sbjct: 183 ADALRTNTSLKIFQILRPSQLVSFLVAVAELQIRIGSWG 221

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523320|ref|XP_003530288.1| PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max]

 Score =  229 bits (583), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 108/227 (47%), Positives = 162/227 (71%), Gaps = 5/227 (2%)

Query: 12  DDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDED-LKELVKRVLAHYQQYYQEKS 70
           D N ASFE F + W+VRQ   LDEL+SAQ+++ + +D+D +++L+ RV+ HY QY++EKS
Sbjct: 3   DANAASFEAFLQGWMVRQRGYLDELLSAQQHYQEMQDDDDVRQLINRVICHYGQYFEEKS 62

Query: 71  KVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVET 130
           K+A  NV L+F+P WF+  E+TF W+ GF P ++F+VVN +++DL++EQ++R+  L+ ET
Sbjct: 63  KIAHQNVLLVFSPPWFSSLERTFLWVGGFKPGVSFQVVNTALEDLSEEQKERLSLLNQET 122

Query: 131 RVEEKLLNDELARIQESVAGPTIMELARRRGRLG---EWEMTEGVEVTESNLRASLESLV 187
           +V+E+ LNDELA++ ESVA P ++++AR  GR+     +   EG  V  S  R +LE+LV
Sbjct: 123 KVKERALNDELAKLHESVAAPPLVDMARSHGRVCFSRSFMAEEGSSVP-STFRETLENLV 181

Query: 188 ANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESE 234
           ANAD LRT T+ K+ ++L P Q V F  AVA LQ+RIR W    +S+
Sbjct: 182 ANADALRTNTSLKIFQVLRPAQIVSFLVAVAELQIRIRSWGLDKDSQ 228

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440257|ref|XP_004137901.1| PREDICTED: transcription factor TGA7-like [Cucumis sativus] gi|449483715|ref|XP_004156668.1| PREDICTED: transcription factor TGA7-like [Cucumis sativus]

 Score =  206 bits (523), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 100/225 (44%), Positives = 150/225 (66%), Gaps = 6/225 (2%)

Query: 14  NVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVA 73
           N  SF+ FF AWL+RQ + LD+L+S      Q+RD  L+  + R+L+HY+ YY++KS++A
Sbjct: 7   NADSFKAFFEAWLLRQRNYLDDLLSTAHGTPQNRD--LQVSISRILSHYEDYYEKKSRIA 64

Query: 74  QHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVE 133
           Q ++FL+F P WFT +E+T  WI GF P L  R+VN+S+ DL+DEQ  R+  L  +T+VE
Sbjct: 65  QTDIFLVFTPPWFTTYEKTLLWIGGFRPGLIVRLVNQSIDDLSDEQVVRIRRLKDDTKVE 124

Query: 134 EKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADML 193
           E+LLN++LA+IQE VA P ++E  R  G  G      G E    +L+A+ +S++A+AD+L
Sbjct: 125 ERLLNNDLAKIQEKVAAPPLLEFFRHGGHDG----VIGGEAAMESLKAAFQSVLASADLL 180

Query: 194 RTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESEKDES 238
           R  T  KV +IL P Q V+F  AVA+L LR+R      ++++D +
Sbjct: 181 RRDTALKVTQILTPAQTVRFLAAVAQLHLRVRALGLQEDAKRDPT 225

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448465|ref|XP_002272336.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-1A-like [Vitis vinifera]

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/231 (43%), Positives = 131/231 (56%), Gaps = 9/231 (3%)

Query: 10  NNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDED----LKELVKRVLAHYQQY 65
           NN+ N   FE FFR WLVR E +   L  A E       ED    ++EL+ RV+AHY +Y
Sbjct: 5   NNNPNSEPFEIFFRGWLVRHEEVRLLLQQADERDCDETREDEEARVQELIGRVVAHYAEY 64

Query: 66  YQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDS 125
           Y+ K +V + +V  LF P W TPFE++  WIAGF P  AFR+V   VKDL  EQ + M+ 
Sbjct: 65  YKAKQRVVREDVMTLFEPPWLTPFERSLLWIAGFMPGFAFRLVMNYVKDLNGEQTRMMEQ 124

Query: 126 LSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTES--NLRASL 183
           L  ET  EE  L  EL +++ S   PT++ L     R  EW   E   V E    ++ ++
Sbjct: 125 LKTETAAEEIDLTAELVKVKRS---PTMISLVEMAARGREWADGERDAVKEKIDMVKLAM 181

Query: 184 ESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESE 234
           E LV  AD LR  T  K++EIL+P QNVKF  A+  LQLR+R W    E+E
Sbjct: 182 EMLVECADCLRYKTALKIMEILNPSQNVKFLLAITGLQLRVRNWGLQREAE 232

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448463|ref|XP_002272259.1| PREDICTED: transcription factor TGA3-like [Vitis vinifera]

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/220 (41%), Positives = 133/220 (60%), Gaps = 8/220 (3%)

Query: 18  FETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNV 77
           FE FFR WLVRQE L   L+ A E      +  L+EL+ R +AHY +YY+ K +V + +V
Sbjct: 15  FERFFRGWLVRQEELRQLLLQATERDCDE-EAGLQELIGRAVAHYAEYYKAKQRVVREDV 73

Query: 78  FLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKLL 137
            +L  P W TPFE++  WI GF P  AFR+V   V +L +EQ+QRM+ L  ET  +E+ L
Sbjct: 74  LILLGPPWLTPFERSLLWIGGFKPGFAFRLVTNYVTNLTEEQKQRMEQLRAETAEDERKL 133

Query: 138 NDELARIQESVAGPTIMELARR-RGRL-GEWE-MTEGVEVTESNLRASLESLVANADMLR 194
             EL+R++      +++E+A   R R+ GE + + E +E+    ++ + E LV  AD LR
Sbjct: 134 TAELSRVRTRPTAISLVEMATMARERVNGERDTVDERIEM----MKLAAEILVECADYLR 189

Query: 195 TTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESE 234
             T  K++ IL+P QNVKF  AV +LQ R+R W    E+E
Sbjct: 190 CKTALKIMGILNPSQNVKFLLAVTQLQRRVRNWRMEREAE 229

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461405|ref|XP_004148432.1| PREDICTED: transcription factor TGA4-like [Cucumis sativus] gi|449519256|ref|XP_004166651.1| PREDICTED: transcription factor TGA4-like [Cucumis sativus]

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 133/226 (58%), Gaps = 12/226 (5%)

Query: 15  VASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKE-----LVKRVLAHYQQYYQEK 69
           + +F  F+ +WL  Q   L++L+      H S+  D KE     L+K+VLAHYQ Y++E 
Sbjct: 8   IENFADFYESWLTTQRGFLEQLL------HVSQIADYKEERQLGLIKQVLAHYQLYHEEI 61

Query: 70  SKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVE 129
           SK A  +VF +F+  W T +E+T  WI+GF P++ FR+V+ +VKDL   Q   ++ L  +
Sbjct: 62  SKAAGEDVFRVFSAPWLTSYERTLLWISGFKPSIVFRLVDGAVKDLTPVQAASVEELKTD 121

Query: 130 TRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVAN 189
            + +E+ L + +A +QE+VA P I+ LARR GRL + E+ E +E     L+  +  +   
Sbjct: 122 VKRKERDLAEAMASLQETVAAPPIVGLARRAGRLVDGEICE-MENAIEELKIGMLGVFDG 180

Query: 190 ADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESEK 235
           AD LR TT  +V+EIL   Q ++  TA    Q RIR+W    +S++
Sbjct: 181 ADSLRGTTMKRVMEILRTDQTLRLLTAATEFQQRIRQWGIQRDSQR 226

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537882|ref|XP_002510006.1| Transcription factor HBP-1b, putative [Ricinus communis] gi|223550707|gb|EEF52193.1| Transcription factor HBP-1b, putative [Ricinus communis]

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 114/178 (64%), Gaps = 1/178 (0%)

Query: 49  EDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVV 108
           E  K L+ ++L+HY+ YY+EKS  A+ +VFL   P W + FE+T  W+ GF P + FR++
Sbjct: 21  EQHKHLIAQLLSHYKCYYEEKSNAAREDVFLFMNPPWLSSFERTLLWLGGFKPLVMFRLI 80

Query: 109 NESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEM 168
           N SV DL  EQ +R++ +  ETR+EE+ L + +A +QES+A P I+ L+RR  ++ + E+
Sbjct: 81  NNSVTDLTPEQSERIEQVRFETRIEERALTETMASVQESLASPLILNLSRRFRQMIDGEV 140

Query: 169 TEGVEVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRR 226
           +E +E     L+ ++ +L  NAD LR +T   ++E+L P Q V+F     + QL++ R
Sbjct: 141 SE-MEAALEGLKTAMFALSENADALRRSTAVNLLEVLSPAQAVRFLATALKFQLQVMR 197

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448467|ref|XP_002272378.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Vitis vinifera]

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 132/224 (58%), Gaps = 10/224 (4%)

Query: 18  FETFFRAWLVRQEHLLDELISA--QENHHQSRDED---LKELVKRVLAHYQQYYQEKSKV 72
           FETFFR WLVRQE +   L+ A  + +  ++R+++   L+ L+ RV+AHY +YY+ K +V
Sbjct: 15  FETFFRGWLVRQEEVRQLLLQATTERDCDKAREDEEARLQGLIGRVVAHYAEYYKAKLRV 74

Query: 73  AQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRV 132
            + +   +F P WFT FE+   WI GF P LA R+V   V +L +EQ + M+ +  E   
Sbjct: 75  VREDALNMFEPPWFTLFERNLLWIGGFKPGLALRLVRNYVTNLTEEQTRMMEDVRTEMAE 134

Query: 133 EEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTES--NLRASLESLVANA 190
           EE+ L  EL +++    GPT++ L     R  E    E  EV E    ++ ++E+LV  A
Sbjct: 135 EERELAAELEKVK---TGPTMISLVEMATRGRERSNGERDEVDEQIEIVKLAVETLVECA 191

Query: 191 DMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWASHGESE 234
           D LR  T  K+++IL+P QN+KF  A+ +LQLR+  W    E+E
Sbjct: 192 DYLRCKTALKIMDILNPSQNLKFLLAITQLQLRVCNWGLQREAE 235

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
TAIR|locus:2024412	230	RAS1 "AT1G09950" [Arabidopsis	0.899	0.930	0.373	2e-33
TAIR|locus:2016620	225	ZW2 [Arabidopsis thaliana (tax	0.869	0.92	0.362	3.3e-31
TAIR|locus:2124117	232	AT4G18650 "AT4G18650" [Arabido	0.882	0.905	0.306	5.7e-27
TAIR|locus:2169409	330	OBF5 "AT5G06960" [Arabidopsis	0.945	0.681	0.258	9.2e-20
TAIR|locus:2029366	368	TGA7 "AT1G77920" [Arabidopsis	0.869	0.562	0.306	2.3e-19
TAIR|locus:2086400	244	AT3G14880 "AT3G14880" [Arabido	0.915	0.893	0.301	2.8e-18
TAIR|locus:2030551	384	TGA3 "AT1G22070" [Arabidopsis	0.886	0.549	0.288	2.6e-17
TAIR|locus:2169394	330	AHBP-1B "AT5G06950" [Arabidops	0.928	0.669	0.236	9.7e-17
TAIR|locus:2082234	355	TGA6 "AT3G12250" [Arabidopsis	0.945	0.633	0.236	1.9e-16
TAIR|locus:2152390	291	DOG1 "AT5G45830" [Arabidopsis	0.491	0.402	0.285	5.4e-16

TAIR|locus:2024412 RAS1 "AT1G09950" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 83/222 (37%), Positives = 123/222 (55%)

Query:    11 NDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRD--EDLKELVKRVLAHYQQYYQE 68
             N  +  SF  F   WL+R  + +++L+ A      +R   E+ + LV + L+H  QYYQE
Sbjct:     3 NTSSSQSFTIFVDGWLIRHRYFVEQLMCASSLDETNRISLEEQQSLVAQFLSHCLQYYQE 62

Query:    69 KS---KVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDS 125
             K     +A  NVF  F P WF  + +   W+  F P+L F++   SV DL   Q+ R+ S
Sbjct:    63 KFASVSLAGDNVFTFFCPPWFNSYAKLILWVGDFKPSLVFKLTEVSVADLTRHQKDRISS 122

Query:   126 LSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLG--EWEMTEGVEVTESNLRASL 183
             L  ETR +E+ +  + A +Q+SVA P +M  ARR G +G  + E T+  E  E  L+A +
Sbjct:   123 LKSETRRKEREVMRDFALVQQSVADPPVMLAARRVGAVGMVDGEETDLEEAMEV-LKAGM 181

Query:   184 ESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIR 225
              + + NAD LR +T  KVVEIL P Q +K    + +L LR+R
Sbjct:   182 AAAMNNADQLRCSTVGKVVEILTPPQAIKVLRTIGQLHLRLR 223

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016620 ZW2 [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 78/215 (36%), Positives = 117/215 (54%)

Query:    17 SFETFFRAWLVRQEHLLDELIS-AQENHHQSRDEDLKELVKRVLAHYQQYYQEKS---KV 72
             +F +FF  WL R    + +L   A E    +  E+ + LV   L+HY QYY+EKS    V
Sbjct:     9 TFASFFNDWLCRHRQFVQQLAHLADETTIVTPIEE-ESLVSNFLSHYLQYYEEKSVAMSV 67

Query:    73 AQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRV 132
             A  +++  F+P W + +E+   WI GF P + F+++  SV DL   Q  +++S+ +ET+ 
Sbjct:    68 AGDDIYDFFSPPWLSSYEKLILWIGGFKPGMVFKLITTSVNDLTSHQIDQLESIRLETKR 127

Query:   133 EEKLLNDELARIQESVAGPTIMELARRRG--RLGEWEMTEGVEVTESNLRASLESLVANA 190
              E+ L    A +Q+SV  P +M   RR G  RLGE E  E  +  E  L+  +   + NA
Sbjct:   128 RERDLMRRFALLQQSVGDPLLMVPFRRIGVLRLGEGEQPEMEDAMEV-LKVEMIKAMKNA 186

Query:   191 DMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIR 225
             D LR  T  KVVE+L+P Q++K   A     LR+R
Sbjct:   187 DQLRCVTVGKVVEVLNPRQSIKLLRAAGEFYLRLR 221

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2124117 AT4G18650 "AT4G18650" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 66/215 (30%), Positives = 114/215 (53%)

Query:    18 FETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNV 77
             F  F+ +W+++ E  L +L+ A  N+  S  E L+ L+ ++  H++ YY  K    + +V
Sbjct:    12 FLEFYESWVIQLELYLHQLLIAHNNNTMSETE-LRHLISKLTTHHKAYYTAKWAAIREDV 70

Query:    78 FLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKD---LADEQRQRMDSLSVETRVEE 134
                F   W  P E    W+ G+ P++ FR+V+   K    L + Q ++++ L V+T+ +E
Sbjct:    71 LAFFGSVWLNPLENACSWLTGWKPSMVFRMVDRLRKSRVVLVEAQVKKLEELRVKTKFDE 130

Query:   135 KLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLR 194
             + +  E+ R Q ++A   ++ELAR    +G  E    VE     L   LE +V  AD +R
Sbjct:   131 QKIEREMERYQVAMADRKMVELARLGCHVGG-ESVMVVEAAVRGLSMGLEKMVKAADCVR 189

Query:   195 TTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
               T   +++IL P Q V+F  A A  Q+++RRW +
Sbjct:   190 LKTLKGILDILTPPQCVEFLAAAATFQVQLRRWGN 224

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2169409 OBF5 "AT5G06960" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 59/228 (25%), Positives = 108/228 (47%)

Query:     2 SENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAH 61
             S   +A     D   +F+  +R W   +   + EL SA ++H  + D +L+ +V  V+AH
Sbjct:    98 SSGDQAHSTAGDGAMAFDVEYRRWQEDKNRQMKELSSAIDSH--ATDSELRIIVDGVIAH 155

Query:    62 YQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQ 121
             Y++ Y+ K   A+ +VF L +  W TP E+ F W+ GF  +   +++   ++ L ++Q  
Sbjct:   156 YEELYRIKGNAAKSDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSL 215

Query:   122 RMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRA 181
              +++L   ++  E  L+  +  +Q+S+A  T+          G      G          
Sbjct:   216 DINNLQQSSQQAEDALSQGMDNLQQSLAD-TLSSGTLGSSSSGNVASYMGQMAMAMGKLG 274

Query:   182 SLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
             +LE  +  AD LR  T  ++V +L   Q+ +   AV    LR+R  +S
Sbjct:   275 TLEGFIRQADNLRLQTYQQMVRLLTTRQSARALLAVHNYTLRLRALSS 322

GO:0003677 "DNA binding" evidence=ISS;IDA;NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0006396 "RNA processing" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=TAS

TAIR|locus:2029366 TGA7 "AT1G77920" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 66/215 (30%), Positives = 106/215 (49%)

Query:    15 VASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQ 74
             +ASFE  +  WL  Q   + EL +A ++H    D +LK LV+  L HY   +Q KS  A+
Sbjct:   152 IASFEMEYSHWLQEQSRRVSELRTALQSHIS--DIELKMLVESCLNHYANLFQMKSDAAK 209

Query:    75 HNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEE 134
              +VF L +  W T  E+ F WI GF P+    VV   ++ L D+Q   + +L   ++  E
Sbjct:   210 ADVFYLISGMWRTSTERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQQAE 269

Query:   135 KLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADMLR 194
               L+  + ++Q+S+A   +++            M   +E    NL+A LE  V  AD LR
Sbjct:   270 DALSQGIDKLQQSLAESIVIDAVIESTHYPT-HMAAAIE----NLQA-LEGFVNQADHLR 323

Query:   195 TTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
               T  ++ +IL   Q+ +   A+     R+R  +S
Sbjct:   324 QQTLQQMAKILTTRQSARGLLALGEYLHRLRALSS 358

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2086400 AT3G14880 "AT3G14880" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 73/242 (30%), Positives = 116/242 (47%)

Query:    15 VASFETFFRAWLVRQEHLLDELISAQENHHQSR--DED-LKELVKRVLAHYQQYYQEKSK 71
             +ASF+ F ++W+ +  + L+ L SAQ +H  S   DE+ L+E V RV+ H+++Y++ K  
Sbjct:     7 IASFKKFQQSWIEQLRNHLNHLRSAQNHHRNSATGDEERLREAVDRVMEHFREYHRAKWA 66

Query:    72 VAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVV-NESVKDLADEQRQRMDSLSVET 130
                 +V  + A  W +  E++  W+ G+ PT  F +V  ES   +  E R  +D L    
Sbjct:    67 ATDKDVIEVMASPWASALERSLQWVGGWRPTTLFHLVYTES--SILFESRI-VDILRGFR 123

Query:   131 RVEEKLLNDELARIQESVAGPTIMEL----ARRRG----RLGEWE--MTEGVEVTESN-- 178
               +   L+    R+   V G T+ EL     +        L EW+   ++ V  T S+  
Sbjct:   124 TGDLSDLSPSQFRVP-FVKGRTVSELQCETVKEENAITEELSEWQDDASDLVMGTSSDPD 182

Query:   179 --LRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWA-SHGESEK 235
               +R  L  +V   D LR  T  +VVE+L PLQ  +F  A A L+  +  W  SH     
Sbjct:   183 QRIRR-LAEIVHRTDDLRLRTITRVVEVLSPLQQAEFLVAAAELRTGVAGWGTSHDRRRS 241

Query:   236 DE 237
              E
Sbjct:   242 SE 243

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2030551 TGA3 "AT1G22070" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 2.6e-17, P = 2.6e-17
 Identities = 64/222 (28%), Positives = 109/222 (49%)

Query:    10 NNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEK 69
             N +  +A+FE  +  WL  Q   + E+ +A + H    D +LK LV   L HY   ++ K
Sbjct:   162 NMNSGIAAFEMEYTHWLEEQNRRVSEIRTALQAH--IGDIELKMLVDSCLNHYANLFRMK 219

Query:    70 SKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVE 129
             +  A+ +VF L +  W T  E+ F WI GF P+    VV   V+ L D+Q   + +L   
Sbjct:   220 ADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVVMPYVEPLTDQQLLEVRNLQQS 279

Query:   130 TRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTES--NLRASLESLV 187
             ++  E+ L+  L ++Q+ +     +++     ++ E  +  G  +  +  NL+A LES V
Sbjct:   280 SQQAEEALSQGLDKLQQGLVESIAIQI-----KVVE-SVNHGAPMASAMENLQA-LESFV 332

Query:   188 ANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
               AD LR  T  ++ +IL   Q  +   A+     R+R  +S
Sbjct:   333 NQADHLRQQTLQQMSKILTTRQAARGLLALGEYFHRLRALSS 374

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA;IPI

GO:0005516 "calmodulin binding" evidence=IDA;TAS

GO:0042742 "defense response to bacterium" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0016045 "detection of bacterium" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

GO:0003677 "DNA binding" evidence=IDA

TAIR|locus:2169394 AHBP-1B "AT5G06950" [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 9.7e-17, P = 9.7e-17
 Identities = 53/224 (23%), Positives = 105/224 (46%)

Query:     6 RARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAHYQQY 65
             +A     +   +F+     WL  +   ++EL SA   H  + D +L+ +V  V+AHY++ 
Sbjct:   102 QAHSTGGNGALAFDAEHSRWLEEKNKQMNELRSALNAH--AGDSELRIIVDGVMAHYEEL 159

Query:    66 YQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQRMDS 125
             ++ KS  A+++VF L +  W TP E+ F W+ GF  +   +++   ++ + + Q   +++
Sbjct:   160 FRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINN 219

Query:   126 LSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLES 185
             L   ++  E  L+  +  +Q+S+A  T+          G      G          +LE 
Sbjct:   220 LQQTSQQAEDALSQGMESLQQSLAD-TLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEG 278

Query:   186 LVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
              +  AD LR  T  +++ +L   Q+ +   A+     R+R  +S
Sbjct:   279 FIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDYFSRLRALSS 322

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA;TAS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IGI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

TAIR|locus:2082234 TGA6 "AT3G12250" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 54/228 (23%), Positives = 105/228 (46%)

Query:     2 SENPRARYNNDDNVASFETFFRAWLVRQEHLLDELISAQENHHQSRDEDLKELVKRVLAH 61
             S   +A     +   +F+     WL  +   ++EL SA   H  + D +L+ +V  V+AH
Sbjct:   123 SSGDQAHSTGGNGALAFDAEHSRWLEEKNRQMNELRSALNAH--AGDTELRIIVDGVMAH 180

Query:    62 YQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNESVKDLADEQRQ 121
             Y++ ++ KS  A+++VF L +  W TP E+ F W+ GF  +   +++   ++ + + Q  
Sbjct:   181 YEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVM 240

Query:   122 RMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRA 181
              ++SL   ++  E  L+  +  +Q+S+A  T+                 G          
Sbjct:   241 GINSLQQTSQQAEDALSQGMESLQQSLAD-TLSSGTLGSSSSDNVASYMGQMAMAMGQLG 299

Query:   182 SLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
             +LE  +  AD LR  T  +++ +L   Q+ +   A+     R+R  +S
Sbjct:   300 TLEGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDYSSRLRALSS 347

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA;IMP

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0009410 "response to xenobiotic stimulus" evidence=IGI;RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2152390 DOG1 "AT5G45830" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
 Identities = 34/119 (28%), Positives = 59/119 (49%)

Query:   111 SVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTE 170
             S+ DL+ EQ  +++ L V+   EE+ +  +++ +QE  A   I  +A     +GE  +  
Sbjct:   137 SLSDLSAEQLAKINVLHVKIIDEEEKMTKKVSSLQEDAADIPIATVAYEMENVGEPNVV- 195

Query:   171 GVEVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWAS 229
              V+        ++  L+  AD LR  T AK++ IL P+Q   F  A  +L L +  W +
Sbjct:   196 -VDQALDKQEEAMARLLVEADNLRVDTLAKILGILSPVQGADFLLAGKKLHLSMHEWGT 253

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:2000033 "regulation of seed dormancy process" evidence=IMP

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0010162 "seed dormancy process" evidence=IMP

GO:0010182 "sugar mediated signaling pathway" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	238
pfam14144	79	pfam14144, DOG1, Seed dormancy control	4e-23

>gnl|CDD|206313 pfam14144, DOG1, Seed dormancy control

 Score = 88.8 bits (221), Expect = 4e-23
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 32  LLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQ 91
           LL EL +A   H  + D++L+ LV +VLAHY +Y++ KS  A+ +VF L +  W TP E+
Sbjct: 2   LLAELRAALNAH--ASDDELRSLVDKVLAHYDEYFRLKSAAAKADVFHLLSGMWKTPAER 59

Query: 92  TFFWIAGFNPTLAFRVV 108
            F WI GF P+   +++
Sbjct: 60  CFLWIGGFRPSELLKLL 76

This family of plant proteins appears to be a highly specific controller seed dormancy. Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	238
PF14144	80	DOG1: Seed dormancy control	100.0
PF13801	125	Metal_resist: Heavy-metal resistance; PDB: 3EPV_C	97.22
COG3678	160	CpxP P pilus assembly/Cpx signaling pathway, perip	96.62
PRK12750	170	cpxP periplasmic repressor CpxP; Reviewed	96.42
PRK10455	161	periplasmic protein; Reviewed	96.23
PRK12751	162	cpxP periplasmic stress adaptor protein CpxP; Revi	95.42
PRK10363	166	cpxP periplasmic repressor CpxP; Reviewed	95.02
PF07813	100	LTXXQ: LTXXQ motif family protein; InterPro: IPR01	92.99

>PF14144 DOG1: Seed dormancy control

Probab=100.00  E-value=8.9e-36  Score=223.74  Aligned_cols=80  Identities=38%  Similarity=0.850  Sum_probs=74.5

Q ss_pred             hHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhchhhhcCCCCCChhHHHHHHhhCCChhhHHHhhhc
Q 047612           31 HLLDELISAQENHHQSRDEDLKELVKRVLAHYQQYYQEKSKVAQHNVFLLFAPTWFTPFEQTFFWIAGFNPTLAFRVVNE  110 (238)
Q Consensus        31 ~~l~eLr~al~~~~~~~d~eL~~LV~~~l~Hy~~y~~~K~~aA~~DV~~~~s~~W~tp~Er~flWiGG~RPS~~l~Ll~~  110 (238)
                      +++.|||++++ ++..+|.+|+.||++|++||++||++|+.||++|||++|+|+|+||+||||+||||||||++|+||.+
T Consensus         1 ~~l~eLr~al~-~~~~~~~~L~~lV~~~~~Hy~~y~~~K~~aa~~DV~~~~s~~W~sp~Er~flWiGG~RPS~~~~ll~s   79 (80)
T PF14144_consen    1 RQLNELRAALQ-SHADSDDELRSLVDKVMSHYDEYYRAKSAAAKADVFHLLSPPWKSPLERCFLWIGGWRPSELFKLLYS   79 (80)
T ss_pred             CcHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHhCCCCCCHHHHHHHHHhcCCHHHHHHHHhc
Confidence            57899999997 33348999999999999999999999999999999999999999999999999999999999999965


Q ss_pred             c
Q 047612          111 S  111 (238)
Q Consensus       111 ~  111 (238)
                      +
T Consensus        80 ~   80 (80)
T PF14144_consen   80 Q   80 (80)
T ss_pred             C
Confidence            3

>PF13801 Metal_resist: Heavy-metal resistance; PDB: 3EPV_C 2Y3D_A 2Y3H_D 2Y3G_B 2Y3B_A 2Y39_A 3LAY_H

Probab=97.22  E-value=0.0091  Score=45.62  Aligned_cols=87  Identities=20%  Similarity=0.195  Sum_probs=70.6

Q ss_pred             cCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHHHHHHHHHHHHHH
Q 047612          111 SVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANA  190 (238)
Q Consensus       111 ~l~~Lt~~Ql~~i~~Lq~~t~~~E~aLs~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~kl~~L~~~l~qA  190 (238)
                      ..-+||++|..+|..+......+-..+-+.+......+......      ...        -..+++..++.+...-.+.
T Consensus        38 ~~l~Lt~eQ~~~l~~~~~~~~~~~~~~r~~~~~~r~~l~~ll~~------~~~--------D~~~i~a~~~~~~~~~~~l  103 (125)
T PF13801_consen   38 DMLNLTPEQQAKLRALMDEFRQEMRALRQELRAARQELRALLAA------PPP--------DEAAIEALLEEIREAQAEL  103 (125)
T ss_dssp             HHS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------SSS---------HHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------CCC--------CHHHHHHHHHHHHHHHHHH
Confidence            34569999999999999999999999999999999988877641      111        2456667778888888899


Q ss_pred             hHHHHHHHHHHhhcCCHHHHH
Q 047612          191 DMLRTTTTAKVVEILDPLQNV  211 (238)
Q Consensus       191 D~LR~~TL~~~~~iLtp~Qaa  211 (238)
                      +..|.+++.++..+|||.|=+
T Consensus       104 ~~~~~~~~~~~~~~LtpeQR~  124 (125)
T PF13801_consen  104 RQERLEHLLEIRAVLTPEQRA  124 (125)
T ss_dssp             HHHHHHHHHHHHHTT-GGGHH
T ss_pred             HHHHHHHHHHHHHcCCHHHhC
Confidence            999999999999999999965

>COG3678 CpxP P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism]

Probab=96.62  E-value=0.035  Score=46.96  Aligned_cols=107  Identities=18%  Similarity=0.224  Sum_probs=69.9

Q ss_pred             HHhhCCChhhHHHhhhccCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHH
Q 047612           94 FWIAGFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVE  173 (238)
Q Consensus        94 lWiGG~RPS~~l~Ll~~~l~~Lt~~Ql~~i~~Lq~~t~~~E~aLs~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~  173 (238)
                      +|.|+|-|=--= ..-+.+ +||++|..+|..+...-+   .+..+-+..-..++-+.+.      .+..        -+
T Consensus        39 ~~~g~~~~~~~~-~~~~~l-~lT~~Qrqqi~~i~~~~~---~a~~~~~~~~r~~l~~li~------a~~~--------D~   99 (160)
T COG3678          39 HHGGQFGPRHQG-GMFKGL-DLTRAQRQQIRDLMQAQR---RAQREQLRSKRRALHELIA------ADQF--------DE   99 (160)
T ss_pred             ccCCCCCccccc-cccccc-cccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh------cCCc--------CH
Confidence            477766664210 011223 499999999998887766   3333333333344443332      1211        25


Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 047612          174 VTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVAR  219 (238)
Q Consensus       174 ~am~~kl~~L~~~l~qAD~LR~~TL~~~~~iLtp~Qaa~fL~A~~e  219 (238)
                      .++....+.++..-.+.+.+|.++-.++..||||.|.+.|=--.++
T Consensus       100 aka~a~~~~m~~~~~~~~~~r~k~~~~m~~vLTPEQr~~l~~~~~~  145 (160)
T COG3678         100 AKARAQAEKMENQRQALRELRVKSDNQMYQVLTPEQRAKLQELLAQ  145 (160)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            5677888999999999999999999999999999999776544433

>PRK12750 cpxP periplasmic repressor CpxP; Reviewed

Probab=96.42  E-value=0.18  Score=42.95  Aligned_cols=104  Identities=15%  Similarity=0.207  Sum_probs=63.0

Q ss_pred             ccCCCCcHHHHHHHHHHhHHHHHHHHH--------HHHHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHHHHH
Q 047612          110 ESVKDLADEQRQRMDSLSVETRVEEKL--------LNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRA  181 (238)
Q Consensus       110 ~~l~~Lt~~Ql~~i~~Lq~~t~~~E~a--------Ls~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~kl~  181 (238)
                      ..|+ ||++|...|..++...+.+=.+        ....|....+.+.+.+.      ..+     +.   +.++....+
T Consensus        49 ~~L~-LTdeQk~qik~i~~~~r~~~k~~~~~~r~~~~~~m~a~~~~~~~Ll~------a~~-----FD---eaavral~~  113 (170)
T PRK12750         49 RQLD-LTDAQKEQLKEMREANRAEMKAKYSGNREQSHAEMKAHHAKVQALVL------ADD-----FD---EAAANDLAK  113 (170)
T ss_pred             hhCC-CCHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHh------cCC-----CC---HHHHHHHHH
Confidence            3455 9999999999998877764444        33444444444444443      121     11   223322222


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHh
Q 047612          182 SLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRWA  228 (238)
Q Consensus       182 ~L~~~l~qAD~LR~~TL~~~~~iLtp~Qaa~fL~A~~e~~~~lr~lg  228 (238)
                      .+...-.+.---|.++.++++.||||-|=+.|-.-..+......+-+
T Consensus       114 ~~~~~~~e~~v~~~~~~~~~~~vLTpEQRak~~e~~~~r~~~~~~~~  160 (170)
T PRK12750        114 QMVEKQVERRVKMLEKRHQMLSILTPEQKAKFQELQQERMQECQDKM  160 (170)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222222223467889999999999999999888666665555544

>PRK10455 periplasmic protein; Reviewed

Probab=96.23  E-value=0.067  Score=45.21  Aligned_cols=109  Identities=16%  Similarity=0.239  Sum_probs=65.2

Q ss_pred             HHHhh---CCChhhHHHhhhccCCCCcHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHhchhhHHHHHhhhCCCCccch
Q 047612           93 FFWIA---GFNPTLAFRVVNESVKDLADEQRQRMDSLSVETRVEEKLLN-DELARIQESVAGPTIMELARRRGRLGEWEM  168 (238)
Q Consensus        93 flWiG---G~RPS~~l~Ll~~~l~~Lt~~Ql~~i~~Lq~~t~~~E~aLs-~~ma~lQ~slad~~~~~~~~~~g~~g~~~~  168 (238)
                      .++-|   |..+...|+    .|. ||++|...|..|.+..+..-...+ ++...++.-    +.      .+.     +
T Consensus        37 ~~~~~~~~g~~~~~m~~----~L~-LT~~Qrqqir~im~~~r~~~~~~~~~~r~~l~~l----i~------ad~-----F   96 (161)
T PRK10455         37 MMHHKGKFGPHHDMMFK----GLN-LTDAQKQQIRDIMKAQRDQMKRPPLEERRAMHDI----IA------SDT-----F   96 (161)
T ss_pred             cccCCCCCCchhhhhhh----hCC-CCHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH----Hc------cCc-----c
Confidence            45544   344444443    455 999999999999777666533322 222333221    11      111     1


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Q 047612          169 TEGVEVTESNLRASLESLVANADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRW  227 (238)
Q Consensus       169 ~~~~~~am~~kl~~L~~~l~qAD~LR~~TL~~~~~iLtp~Qaa~fL~A~~e~~~~lr~l  227 (238)
                         -+.++...++.+...-.+.-..|.++-.+|..||||-|-+.|=.   .+..|+.++
T Consensus        97 ---Deaavra~~~k~~~~~~~~~~~~~~~~~qiy~vLTPEQr~q~~~---~~ekr~~~~  149 (161)
T PRK10455         97 ---DKAKAEAQITKMEAQRKARMLAHMETQNKIYNVLTPEQKKQFNA---NFEKRLTER  149 (161)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH---HHHHHHHhc
Confidence               14445455555655556666688999999999999999998753   334444443

>PRK12751 cpxP periplasmic stress adaptor protein CpxP; Reviewed

Probab=95.42  E-value=0.34  Score=41.10  Aligned_cols=98  Identities=11%  Similarity=0.160  Sum_probs=62.1

Q ss_pred             cCCCCcHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHHHHHHHHHHHHH
Q 047612          111 SVKDLADEQRQRMDSLSVETRVEEKLL-NDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVAN  189 (238)
Q Consensus       111 ~l~~Lt~~Ql~~i~~Lq~~t~~~E~aL-s~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~kl~~L~~~l~q  189 (238)
                      .+. ||++|...|-.+....+...... -.+++.++.-+...+               +   -+.++...++.+...-..
T Consensus        54 ~l~-LTd~QR~qmr~im~~~r~~~~~~~~~~~~~m~~Li~Ad~---------------F---DeaAvra~~~kma~~~~e  114 (162)
T PRK12751         54 GIN-LTEQQRQQMRDLMRQSHQSQPRLDLEDREAMHKLITADK---------------F---DEAAVRAQAEKMSQNQIE  114 (162)
T ss_pred             cCC-CCHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHhcCC---------------C---CHHHHHHHHHHHHHHHHH
Confidence            444 99999999999888777653111 123333333222211               1   144444445555544444


Q ss_pred             HhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Q 047612          190 ADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRRW  227 (238)
Q Consensus       190 AD~LR~~TL~~~~~iLtp~Qaa~fL~A~~e~~~~lr~l  227 (238)
                      ---.+.++..+++.+|||-|-+.|=--.-+-...+|..
T Consensus       115 ~~v~~~~~~~qmy~lLTPEQra~l~~~~e~r~~~~~~~  152 (162)
T PRK12751        115 RHVEMAKVRNQMYNLLTPEQKEALNKKHQERIEKLQQK  152 (162)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            44577899999999999999999987777766666654

>PRK10363 cpxP periplasmic repressor CpxP; Reviewed

Probab=95.02  E-value=0.16  Score=43.23  Aligned_cols=97  Identities=15%  Similarity=0.181  Sum_probs=57.7

Q ss_pred             cCCCCcHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHHHHHHHHHHHHH
Q 047612          111 SVKDLADEQRQRMDSLSVETRVEEKLLND-ELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVAN  189 (238)
Q Consensus       111 ~l~~Lt~~Ql~~i~~Lq~~t~~~E~aLs~-~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~kl~~L~~~l~q  189 (238)
                      .|. ||++|...|-.|.+.-+.+...++. +++.++    +.+.      .+.     +   -+.++....+.+...=..
T Consensus        48 gLd-LTdaQRqQmRdLm~~~r~~~~~~~~~er~amh----~LI~------ad~-----F---DEaavra~a~kma~~~~e  108 (166)
T PRK10363         48 GIS-LTEHQRQQMRDLMQQARHEQPPVNVSEMETMH----RLVT------AEN-----F---DENAVRAQAEKMAQEQVA  108 (166)
T ss_pred             CCC-CCHHHHHHHHHHHHHHHhcccccCHHHHHHHH----HHHh------cCC-----C---CHHHHHHHHHHHHHHHHH
Confidence            344 9999999999999888876554432 333333    1111      111     1   144444444444443333


Q ss_pred             HhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH
Q 047612          190 ADMLRTTTTAKVVEILDPLQNVKFFTAVARLQLRIRR  226 (238)
Q Consensus       190 AD~LR~~TL~~~~~iLtp~Qaa~fL~A~~e~~~~lr~  226 (238)
                      .-=-|.++-.+|..||||-|-+.|=--.-+....+|+
T Consensus       109 ~~Vem~k~~nqmy~lLTPEQKaq~~~~~~~rm~~~~~  145 (166)
T PRK10363        109 RQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRD  145 (166)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            3346778899999999999999994433333333333

>PF07813 LTXXQ: LTXXQ motif family protein; InterPro: IPR012899 This five residue motif is found in a number of bacterial proteins bearing similarity to the protein CpxP (P32158 from SWISSPROT)

Probab=92.99  E-value=0.61  Score=34.71  Aligned_cols=81  Identities=22%  Similarity=0.317  Sum_probs=46.2

Q ss_pred             ccCCCCcHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHH--HHHHHH
Q 047612          110 ESVKDLADEQRQRMDSLSVETRVEEKLL---NDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESN--LRASLE  184 (238)
Q Consensus       110 ~~l~~Lt~~Ql~~i~~Lq~~t~~~E~aL---s~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~--kl~~L~  184 (238)
                      ..|. ||++|...|..+....+..-..+   .+.+.++..              +..        -..+++.  ..+.+.
T Consensus        11 ~~L~-LT~eQ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------------~~~--------~~~~~~~~~~~~~~~   67 (100)
T PF07813_consen   11 EELN-LTDEQKAKWRAIRQAMKAKMKPLKAMREQLRALRD--------------PSF--------DEAAPEALAAMAEMM   67 (100)
T ss_dssp             TTS---THHHHHHHHHHHHHHCTTS------HHHHHHHHH--------------SS----------HHHHHHHH--HHCH
T ss_pred             hhCC-CCHHHHHHHHHHHHHHHHHHHhhcccHHHHHHhcc--------------ccC--------ChhHHHHHHHHHHHH
Confidence            4555 99999999999998887766666   222222222              000        0111111  114444


Q ss_pred             HHHHHHhHHHHHHHHHHhhcCCHHHHHHH
Q 047612          185 SLVANADMLRTTTTAKVVEILDPLQNVKF  213 (238)
Q Consensus       185 ~~l~qAD~LR~~TL~~~~~iLtp~Qaa~f  213 (238)
                      ..-.+.-..|..+...+..||||-|=..|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~vLt~eQk~~~   96 (100)
T PF07813_consen   68 ELRAEMMEERAKAQHALYAVLTPEQKEKF   96 (100)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTS-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence            55555566788999999999999998776

This is a periplasmic protein that aids in combating extracytoplasmic protein-mediated toxicity, and may also be involved in the response to alkaline pH []. Another member of this family, Spy (P77754 from SWISSPROT) is also a periplasmic protein that may be involved in the response to stress []. The homology between CpxP and Spy may indicate that these two proteins are functionally related []. The motif is found repeated twice in many members of this entry. ; GO: 0042597 periplasmic space; PDB: 3ITF_B 3QZC_B 3OEO_D 3O39_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	238
2y39_A	118	Nickel and cobalt resistance protein CNRR; metal b	97.42
3itf_A	145	Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxr	96.34
3o39_A	108	Periplasmic protein related to spheroblast format;	94.99
3oeo_A	138	Spheroplast protein Y; LTXXQ, extracytoplasmic str	94.17
3lay_A	175	Zinc resistance-associated protein; salmonella typ	90.74

>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*

Probab=97.42  E-value=0.0027  Score=50.01  Aligned_cols=96  Identities=14%  Similarity=0.157  Sum_probs=73.9

Q ss_pred             hhhccCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHHHHHHHHHH
Q 047612          107 VVNESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESL  186 (238)
Q Consensus       107 Ll~~~l~~Lt~~Ql~~i~~Lq~~t~~~E~aLs~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~kl~~L~~~  186 (238)
                      +|-..|. ||++|...|+.+...-.....+|..+|...-..|++....       ..+   |++.+..|++..-.     
T Consensus        14 ~vh~~L~-Lt~~Q~~~leaie~~fa~~r~~le~emRaan~~La~ai~~-------~~~---~~p~V~aaid~~h~-----   77 (118)
T 2y39_A           14 ILHEAVP-LDANEREILELKEDAFAQRRREIETRLRAANGKLADAIAK-------NPA---WSPEVEAATQEVER-----   77 (118)
T ss_dssp             HHHHHSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCS---CCHHHHHHHHHHHH-----
T ss_pred             HHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccc---cCHHHHHHHHHHHH-----
Confidence            3444555 9999999999999999999999999999999999987742       112   56667777753322     


Q ss_pred             HHHHhHHHHHH---HHHHhhcCCHHHHHHHHHHHHHH
Q 047612          187 VANADMLRTTT---TAKVVEILDPLQNVKFFTAVARL  220 (238)
Q Consensus       187 l~qAD~LR~~T---L~~~~~iLtp~Qaa~fL~A~~e~  220 (238)
                        ..-.|+..|   +-.|..||||-|+..|=-.+.+-
T Consensus        78 --~mG~LQkeTi~HvfeMR~VLtPeQ~~~fd~~vv~a  112 (118)
T 2y39_A           78 --AAGDLQRATLVHVFEMRAGLKPEHRPAYDRVLIDA  112 (118)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence              444588899   66678999999999997666543

>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A

Probab=96.34  E-value=0.018  Score=46.75  Aligned_cols=93  Identities=16%  Similarity=0.180  Sum_probs=63.5

Q ss_pred             ccCCCCcHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHHHHHHHHHHHH
Q 047612          110 ESVKDLADEQRQRMDSLSVETRVEEKLLND-ELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVA  188 (238)
Q Consensus       110 ~~l~~Lt~~Ql~~i~~Lq~~t~~~E~aLs~-~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~kl~~L~~~l~  188 (238)
                      ..|. ||++|..+|..|....+.+...++. .+..++    +.+.      .+.     +   -+.++...++.+...-.
T Consensus        42 ~~L~-LTdeQkqqir~L~~~~r~~~~~~~~~~r~~l~----~Li~------ad~-----f---Deaa~ral~~~~~~~~~  102 (145)
T 3itf_A           42 DGIS-LTEHQRQQMRDLMQQARHEQPPVNVSELETMH----RLVT------AEN-----F---DENAVRAQAEKMANEQI  102 (145)
T ss_dssp             TTCC-CCHHHHHHHHHHHHHHHHHSCCCCHHHHHHHH----HHHT------CSS-----C---CHHHHHHHHHHHHHHHH
T ss_pred             ccCC-CCHHHHHHHHHHHHHHHHHhhhccHHHHHHHH----HHHc------cCC-----C---CHHHHHHHHHHHHHHHH
Confidence            3555 9999999999999888876544421 112211    1111      121     1   26666677777777777


Q ss_pred             HHhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 047612          189 NADMLRTTTTAKVVEILDPLQNVKFFTAVARLQ  221 (238)
Q Consensus       189 qAD~LR~~TL~~~~~iLtp~Qaa~fL~A~~e~~  221 (238)
                      +.--.|.++-.+|..||||-|-+.|-.-..+-.
T Consensus       103 e~~v~r~k~~~qiy~vLTPEQk~ql~e~~~~r~  135 (145)
T 3itf_A          103 ARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRM  135 (145)
T ss_dssp             HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            777789999999999999999999876544433

>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}

Probab=94.99  E-value=0.033  Score=43.06  Aligned_cols=82  Identities=20%  Similarity=0.204  Sum_probs=51.6

Q ss_pred             CcHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHHHHHHHHHHHHHHhHH
Q 047612          115 LADEQRQRMDSLSVETRVEEKLLN-DELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVANADML  193 (238)
Q Consensus       115 Lt~~Ql~~i~~Lq~~t~~~E~aLs-~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~kl~~L~~~l~qAD~L  193 (238)
                      ||++|...|-.|....+..-+..+ .+...++    +.+.      .+..        -+.++...++.+...-.+.---
T Consensus        18 LTd~Qk~qir~L~~~~r~~~~~~~~~~r~~m~----~Li~------ad~F--------DEaaar~l~~~~~~~~~e~~v~   79 (108)
T 3o39_A           18 LTDAQKQQIREIMKGQRDQMKRPPLEERRAMH----DIIA------SDTF--------DKAKAEAQIAKMEEQRKANMLA   79 (108)
T ss_dssp             CCHHHHHHHHHHHHTTTTSCCCCCHHHHHHHH----HHHS------SSSC--------CHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhcccccHHHHHHHH----HHhc------cCCC--------CHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999887776533222 1112222    1111      1211        1445555555555555555557


Q ss_pred             HHHHHHHHhhcCCHHHHHHHH
Q 047612          194 RTTTTAKVVEILDPLQNVKFF  214 (238)
Q Consensus       194 R~~TL~~~~~iLtp~Qaa~fL  214 (238)
                      |.++-.+|..||||-|-+.|-
T Consensus        80 ~~r~~~qmy~lLTPEQk~q~~  100 (108)
T 3o39_A           80 HMETQNKIYNILTPEQKKQFN  100 (108)
T ss_dssp             HHHHHHHHHTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHH
Confidence            888999999999999998874

>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}

Probab=94.17  E-value=0.02  Score=45.80  Aligned_cols=94  Identities=17%  Similarity=0.170  Sum_probs=59.3

Q ss_pred             hccCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHHHHHHHHHHHHHHH
Q 047612          109 NESVKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVTESNLRASLESLVA  188 (238)
Q Consensus       109 ~~~l~~Lt~~Ql~~i~~Lq~~t~~~E~aLs~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~am~~kl~~L~~~l~  188 (238)
                      ...|. ||++|...|..|.+..+..-...   +....+.+.+.+.      .+..        -+.++...++.+...-.
T Consensus        29 ~~~L~-LT~eQ~~qir~i~~~~r~~~~~~---~~~~r~~l~~Li~------a~~f--------Deaav~al~~~~~~~~~   90 (138)
T 3oeo_A           29 FKDLN-LTDAQKQQIREIMKGQRDQMKRP---PLEERRAMHDIIT------SDTF--------DKVKAEAQIAKMEEQRK   90 (138)
T ss_dssp             -CCSC-CCTTHHHHHHHHHHHHSSSSCCC---CTTHHHHHHHHHT------CSSC--------CHHHHHHHHGGGSHHHH
T ss_pred             HhcCC-CCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhc------cCCC--------CHHHHHHHHHHHHHHHH
Confidence            35666 99999999999987776532210   1111122222111      1211        25556566666666667


Q ss_pred             HHhHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 047612          189 NADMLRTTTTAKVVEILDPLQNVKFFTAVARL  220 (238)
Q Consensus       189 qAD~LR~~TL~~~~~iLtp~Qaa~fL~A~~e~  220 (238)
                      +.--.|.++..+|..||||-|-+.|---+.+-
T Consensus        91 e~~~~~~~~~~~~~~vLTPEQr~q~~~~~~kr  122 (138)
T 3oeo_A           91 ANMLAHMETQNKIYNILTPEQKKQFNANFEKR  122 (138)
T ss_dssp             HHHHHHHHHHHHHHTTSCHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            77778999999999999999999987765553

>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}

Probab=90.74  E-value=2.7  Score=34.81  Aligned_cols=89  Identities=11%  Similarity=0.043  Sum_probs=53.0

Q ss_pred             hCCChhhHHHhhhcc-CCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhchhhHHHHHhhhCCCCccchhhhHHHH
Q 047612           97 AGFNPTLAFRVVNES-VKDLADEQRQRMDSLSVETRVEEKLLNDELARIQESVAGPTIMELARRRGRLGEWEMTEGVEVT  175 (238)
Q Consensus        97 GG~RPS~~l~Ll~~~-l~~Lt~~Ql~~i~~Lq~~t~~~E~aLs~~ma~lQ~slad~~~~~~~~~~g~~g~~~~~~~~~~a  175 (238)
                      |||.+-.   =+..+ .-+||++|..++..|+++.+.+-.+|.+.|...++.+.+...      ....        -..+
T Consensus        52 g~~~~g~---gm~~q~~LnLT~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~------a~~~--------Deak  114 (175)
T 3lay_A           52 HHWGNND---GMWQQGGSPLTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLT------ASSP--------DTAK  114 (175)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------SSSC--------CHHH
T ss_pred             CCCCCCC---CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCC--------CHHH
Confidence            6665552   11122 356999999999999999999999999998888888776553      1211        1444


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 047612          176 ESNLRASLESLVANADMLRTTTTAKVV  202 (238)
Q Consensus       176 m~~kl~~L~~~l~qAD~LR~~TL~~~~  202 (238)
                      ++....++..+=.+-...|.+.-.+|.
T Consensus       115 I~aL~~Ei~~Lr~qL~~~R~k~~~em~  141 (175)
T 3lay_A          115 INAVAKEMESLGQKLDEQRVKRDVAMA  141 (175)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444455555555566667777777664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00