Citrus Sinensis ID: 047622

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Protein Sequence
MERTRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVFVEEHQYHYLQEIQPQPSTELAPHNHLQSFQNHHLMQQSPACFFRAQEENYQQSMTQEDPHELELSDSHQNMQDTPVTEQNSHEQLQLSAETHQHFTSSDLQEYQQMPVTDQIPHHQLQLSFEGYRSR
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEcccccccccHHHHcccccccccccEEEcccccccccccccccccccccccccccccccEEEcccccEEEEEEcEEEEccccccccccEEEEEcccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccHHHHHHccccccccccccHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEEEcccccccccccHHccccccccccEEEEEcccccccccccccccHcccccEEcccccccEcccccccEEEEEEEEEEEcccccccccEEEEEEEccccccccccccccEEEEEEEEccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccHHHHccccccccc
Coil and Loop (DISEMBL)
mertrpplplgckfqpsdeLLVQFYLFNkisgtpapfvddLVRTenlygfkepwqiwrqfggpdledgedlyfftplkkksvngsridrrvgtgtwqgedagKAVVSRKSkkkigskkrfryekdksphngcwimheyslnpsllpqnlrssdlvlcrirknedidqpaepvfveeHQYHYlqeiqpqpstelaphnhlqsfqnhhlmqqspACFFRAQEENyqqsmtqedphelelsdshqnmqdtpvteqnshEQLQLSAethqhftssdlqeyqqmpvtdqiphhqlqlsfegyrsr
Flexible Loop (DISEMBL)
mertrpplplgckfqpsDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFtplkkksvngsridrrvgtgtwqgedagkavvsrkskkkigskkrfryekdksphngCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVFVEEHQYHYLQEIQPQPSTELAPHNHLQSFQNHHLMQQSPACFFRAQEENYQQSMTQEDPHELELSDSHQNMQDTPVTEQNSHEQLQLSAETHQHFTSSDLQEYQQMPVTDQIPHHqlqlsfegyrsr
Low Complexity Region (SEG)
MERTRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVsrkskkkigskkrfrYEKDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVFVEEHQYHYLQEIQPQPSTELAPHNHLQSFQNHHLMQQSPACFFRAQEENYQQSMTQEDPHELELSDSHQNMQDTPVTEQNSHEQLQLSAETHQHFTSSDLQEYQQMPVTDQIPHHQLQLSFEGYRSR
Disordered region (IsUnstruct)
**********GCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSV***********************************************NGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVFVEEHQYHYLQ*********************************************************************************************************************
Disordered Region (DISOPRED)
*****PP**LGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPHNGCWIMHEY***************LVLCRIRK*******************************************************************************************************************************************
Disordered Region (DISEMBL)
MERTRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGE*****************KKRFRYEKDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVFVEEHQYHYLQEIQPQPSTELAPHNHLQSFQNHHLMQQSPACFFRAQEE****************SDSHQNM***************LSAETHQHFTSSDLQEYQQMPVTDQIPHHQLQLSFEGYRSR
Disordered Region (DISPRO)
******PLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNED****************************************************************QEDPHE******************************************Q**PVTDQI***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERTRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVFVEEHQYHYLQEIQPQPSTELAPHNHLQSFQNHHLMQQSPACFFRAQEENYQQSMTQEDPHELELSDSHQNMQDTPVTEQNSHEQLQLSAETHQHFTSSDLQEYQQMPVTDQIPHHQLQLSFEGYRSR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	300	2.2.26 [Sep-21-2011]
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.466	0.494	0.370	1e-15
Q7F2L3	303	NAC domain-containing pro	no	no	0.503	0.498	0.357	1e-15
A0SPJ8	406	NAC transcription factor	N/A	no	0.496	0.366	0.324	3e-15
Q52QH4	318	NAC domain-containing pro	no	no	0.483	0.455	0.345	4e-15
D2SMN4	406	NAC transcription factor	N/A	no	0.496	0.366	0.324	7e-15
O49255	268	NAC transcription factor	no	no	0.476	0.533	0.349	2e-14
Q8H115	312	NAC domain-containing pro	no	no	0.46	0.442	0.353	3e-14
A2YMR0	425	NAC transcription factor	N/A	no	0.506	0.357	0.310	4e-14
Q8H4S4	425	NAC transcription factor	no	no	0.506	0.357	0.315	4e-14
A0SPJ6	396	NAC transcription factor	N/A	no	0.496	0.376	0.320	6e-14

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 22/162 (13%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISG--TPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDL 65
           LP G +F P+DE LV+FYL  K +     AP + ++    +LY F  PW++        L
Sbjct: 7   LPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEI----DLYKFN-PWELPEM----SL 57

Query: 66  EDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKD 125
              ++ YFF+P  +K  NGSR +R  GTG W+   A K +   K+   +G KK   +   
Sbjct: 58  YGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKT---LGIKKALVFYAG 114

Query: 126 KSPHN--GCWIMHEYSL-----NPSLLPQ-NLRSSDLVLCRI 159
           K+P      WIMHEY L     + S+  + NLR  D VLCRI
Sbjct: 115 KAPKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRI 156

Arabidopsis thaliana (taxid: 3702)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 84/168 (50%), Gaps = 17/168 (10%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
           LP G +F P+DE LV  YL  + +G P      ++   +LY F +PWQ+ R      L  
Sbjct: 9   LPPGFRFHPTDEELVMHYLCRRCAGLP--IAVPIIAEIDLYKF-DPWQLPRM----ALYG 61

Query: 68  GEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKS 127
            ++ YFF+P  +K  NGSR +R  G+G W+   A K V    S K +  KK   +   K+
Sbjct: 62  EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV---GSPKPVAIKKALVFYAGKA 118

Query: 128 PHN--GCWIMHEYSL----NPSLLPQNLRSSDLVLCRI-RKNEDIDQP 168
           P      WIMHEY L      +    +LR  D VLCRI  K   +++P
Sbjct: 119 PKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKP 166

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score = 82.8 bits (203), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 33/182 (18%)

Query: 4   TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGP 63
           + P LP G +F P+DE LV  YL  K +  P P    ++   +LY F +PW++      P
Sbjct: 31  SAPELPPGFRFHPTDEELVVHYLKKKAAKAPLPVT--IIAEVDLYKF-DPWEL------P 81

Query: 64  DLED-GE-DLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKS---KKKIGSKK 118
           +    GE + YFF+P  +K  NG+R +R   +G W+     K +++  +   ++K+G KK
Sbjct: 82  EKATFGEHEWYFFSPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKK 141

Query: 119 RFRYEKDKSPHN--GCWIMHEYSL-----------------NPSLLPQNLRSSDLVLCRI 159
              + + K P      WIMHEY L                   S  P +LR  D VLCRI
Sbjct: 142 ALVFYRGKPPRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRI 201

Query: 160 RK 161
            K
Sbjct: 202 YK 203

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 14/159 (8%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
           LP G +F P+DE LV  YL  K++  P P    ++   +LY   +PW +  +     L  
Sbjct: 21  LPPGFRFHPTDEELVVHYLCRKVARQPLPV--PIIAEVDLYKL-DPWDLPEKA----LFG 73

Query: 68  GEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKS 127
            ++ YFFTP  +K  NGSR +R  G G W+   A K V  + S + +G KK   +   K+
Sbjct: 74  RKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKA 133

Query: 128 PHN--GCWIMHEYSL-NPSLLPQNLRSS----DLVLCRI 159
           P      WIMHEY L +    P   + S    + VLCR+
Sbjct: 134 PRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRL 172

Oryza sativa subsp. japonica (taxid: 39947)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score = 81.3 bits (199), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 33/182 (18%)

Query: 4   TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGP 63
           + P LP G +F P+DE LV  YL  K +  P P    ++   +LY F +PW++      P
Sbjct: 31  SAPELPPGFRFHPTDEELVVHYLKKKAAKAPLPVT--IIAEVDLYKF-DPWEL------P 81

Query: 64  DLED-GE-DLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKS---KKKIGSKK 118
           +    GE + YFF+P  +K  NG+R +R   +G W+     K +++  +   ++K+G KK
Sbjct: 82  EKATFGEHEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKK 141

Query: 119 RFRYEKDKSPHN--GCWIMHEYSL-----------------NPSLLPQNLRSSDLVLCRI 159
              + + K P      WIMHEY L                   S  P +LR  D VLCRI
Sbjct: 142 ALVFYRGKPPRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRI 201

Query: 160 RK 161
            K
Sbjct: 202 YK 203

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 20/163 (12%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPD-LE 66
           LP G +F P+DE L+ +YL N+    P P    ++   ++Y F +PWQ+      P+  E
Sbjct: 9   LPPGFRFHPTDEELIVYYLRNQTMSKPCPV--SIIPEVDIYKF-DPWQL------PEKTE 59

Query: 67  DGED-LYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKD 125
            GE+  YFF+P ++K  NG R +R   +G W+     KA+ S  S   +G KK   + K 
Sbjct: 60  FGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSS--NVGVKKALVFYKG 117

Query: 126 KSPHN--GCWIMHEYSLNPSLLPQ-----NLRSSDLVLCRIRK 161
           + P      WIMHEY L+ S         ++R  + VLCRI K
Sbjct: 118 RPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYK 160

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 26/164 (15%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTP--APFVDDLVRTENLYGFKEPWQIWRQFGGPD- 64
           LP G +F P+DE LV+FYL  + +  P   P + ++    +LY F  PW++      P+ 
Sbjct: 50  LPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEI----DLYKF-NPWEL------PEM 98

Query: 65  -LEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYE 123
            L   ++ YFF+   +K  NGSR +R  GTG W+   A K +   K+   +G KK   + 
Sbjct: 99  ALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKT---LGIKKALVFY 155

Query: 124 KDKSPHN--GCWIMHEYSL------NPSLLPQNLRSSDLVLCRI 159
             K+P      WIMHEY L        +    NLR  D VLCRI
Sbjct: 156 AGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRI 199

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 35/187 (18%)

Query: 4   TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQ--FG 61
           + P LP G +F P+DE LV  YL  K +  P P    ++   +LY F +PW++  +  FG
Sbjct: 25  SAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVT--IIAEVDLYKF-DPWELPEKANFG 81

Query: 62  GPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKS-KKKIGSKKRF 120
                  ++ YFF+P  +K  NG+R +R   +G W+     K +++  S ++K+G KK  
Sbjct: 82  ------EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKAL 135

Query: 121 RYEKDKSPHN--GCWIMHEYSL---------------------NPSLLPQNLRSSDLVLC 157
            + + K P      WIMHEY L                       S    +LR  D VLC
Sbjct: 136 VFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLC 195

Query: 158 RIRKNED 164
           RI K  +
Sbjct: 196 RIYKKTN 202

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 35/187 (18%)

Query: 4   TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQ--FG 61
           + P LP G +F P+DE LV  YL  K +  P P    ++   +LY F +PW +  +  FG
Sbjct: 25  SAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVT--IIAEVDLYKF-DPWDLPEKANFG 81

Query: 62  GPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKS-KKKIGSKKRF 120
                  ++ YFF+P  +K  NG+R +R   +G W+     K ++S  S ++K+G KK  
Sbjct: 82  E------QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKAL 135

Query: 121 RYEKDKSPHN--GCWIMHEYSL---------------------NPSLLPQNLRSSDLVLC 157
            + + K P      WIMHEY L                       S    +LR  D VLC
Sbjct: 136 VFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLC 195

Query: 158 RIRKNED 164
           RI K  +
Sbjct: 196 RIYKKTN 202

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 29/178 (16%)

Query: 4   TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQ--FG 61
           + P LP G +F P+DE LV  YL  K +  P P    ++   +LY F +PW++  +  FG
Sbjct: 24  SAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVT--IITEVDLYKF-DPWELPEKATFG 80

Query: 62  GPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRK-SKKKIGSKKRF 120
                  ++ YFF+P  +K  NG+R +R   +G W+     K +++    ++K+G KK  
Sbjct: 81  ------EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKAL 134

Query: 121 RYEKDKSPHN--GCWIMHEYSLN-----------PSLL----PQNLRSSDLVLCRIRK 161
            + + K P      WIMHEY L            P +       +LR  D VLCRI K
Sbjct: 135 VFYRGKPPKGLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYK 192

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	300
357512399	210	NAC domain-containing protein [Medicago	0.506	0.723	0.451	3e-33
357439789	325	NAC domain protein [Medicago truncatula]	0.493	0.455	0.442	1e-30
255584644	376	NAC domain-containing protein, putative	0.526	0.420	0.454	7e-30
255545410	363	transcription factor, putative [Ricinus	0.48	0.396	0.487	5e-29
449448878	306	PREDICTED: NAC domain-containing protein	0.503	0.493	0.455	9e-28
255577785	328	transcription factor, putative [Ricinus	0.71	0.649	0.359	2e-27
255580284	508	transcription factor, putative [Ricinus	0.493	0.291	0.437	2e-27
449442783	301	PREDICTED: NAC domain-containing protein	0.51	0.508	0.438	9e-27
255577787	316	conserved hypothetical protein [Ricinus	0.62	0.588	0.380	1e-26
449457267	211	PREDICTED: NAC domain-containing protein	0.483	0.687	0.426	3e-23

>gi|357512399|ref|XP_003626488.1| NAC domain-containing protein [Medicago truncatula] gi|355501503|gb|AES82706.1| NAC domain-containing protein [Medicago truncatula]

 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 104/155 (67%), Gaps = 3/155 (1%)

Query: 14  FQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGF-KEPWQIWRQFGGPDLEDGEDLY 72
           F P+D+ L++ +L+N+I   P P    ++  E L+G  K PW+IW +F       G+DLY
Sbjct: 11  FTPTDDELIRSFLYNRIHNNPVPNYITILDYE-LFGIVKNPWEIWEEFAPSHSYCGKDLY 69

Query: 73  FFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPHNGC 132
           FFT LKKKS    R+ R +G+GTW+GED GK +V++++ K +G KKRFR+ K  + H+G 
Sbjct: 70  FFTTLKKKSATSKRLIRTIGSGTWEGEDTGKGIVAKETNKVLGIKKRFRFGKSNTFHDGA 129

Query: 133 WIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQ 167
           WI+HEY+L+ SL+   L +++ VLCR RKN  I+Q
Sbjct: 130 WILHEYNLDKSLINNTL-ANNYVLCRFRKNLKINQ 163

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357439789|ref|XP_003590172.1| NAC domain protein [Medicago truncatula] gi|355479220|gb|AES60423.1| NAC domain protein [Medicago truncatula]

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 1/149 (0%)

Query: 14  FQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYF 73
             P+D+ L+Q +L+NKI   P P    ++  +     K PW+IW +FG  +   G+DLYF
Sbjct: 11  ITPTDDELLQQFLYNKIHNKPLPNHITILEHDLFGTAKNPWEIWEEFGTSNSNRGKDLYF 70

Query: 74  FTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPHNGCW 133
           FT LKKKS   SR+ R +G G W+GED+GK + ++   + +G KKRFR+EK  +  +G W
Sbjct: 71  FTTLKKKSATSSRVVRTIGLGRWEGEDSGKNIFAKDKNQILGMKKRFRFEKSDTSQDGGW 130

Query: 134 IMHEYSLNPSLLPQNLRSSDLVLCRIRKN 162
           I+HEYSL+ SL+   L  ++ VLCR RKN
Sbjct: 131 ILHEYSLHNSLISNPL-DNNYVLCRFRKN 158

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584644|ref|XP_002533045.1| NAC domain-containing protein, putative [Ricinus communis] gi|223527164|gb|EEF29335.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  137 bits (344), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 16/174 (9%)

Query: 1   MERTRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQF 60
           M++ +  +P+G +F P+D  LV +YLFNK++G   P  + LV   NLYG  EP Q+W +F
Sbjct: 1   MQQLKDQIPVGYRFNPTDCELVGYYLFNKLNGCLLPIDNMLVADTNLYGKDEPLQLWEKF 60

Query: 61  GG--PDLEDGEDLYFFTPLKKKSVNGSRIDRRVGT-GTWQGEDAGKAVVSRKSKKKI--G 115
           GG      DGE +Y FT LKKK   GSRI R VG  GTW G DAGK V  + ++ ++  G
Sbjct: 61  GGNCSFYSDGE-IYLFTKLKKK---GSRILRSVGAGGTWHGVDAGKPVRIKTNRGQLIEG 116

Query: 116 SKKRFRYEKDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPA 169
           +KK F Y    S H+GCWIMHE+SL          S D VLCR++KN   D+  
Sbjct: 117 TKKCFSYRNPNSIHDGCWIMHEFSLFD-------ISYDWVLCRLKKNFSTDETG 163

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545410|ref|XP_002513765.1| transcription factor, putative [Ricinus communis] gi|223546851|gb|EEF48348.1| transcription factor, putative [Ricinus communis]

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 103/160 (64%), Gaps = 16/160 (10%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISG----TPAPFVDDLVRTENLYGFKEPWQIWRQFGGP 63
           + +G +F+P DE L+ +YL +KI+      P P     V+  +LYG  EPW+IW  FGG 
Sbjct: 7   MQVGVRFRPLDEELLMYYLSHKINNLSLPNPCP-----VKDCDLYGKNEPWEIWDYFGGQ 61

Query: 64  DLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYE 123
           +L D E LYFFT LK+KS + SRI R VGTGTW G+ +GK V+ RK+KK IG  K+F Y+
Sbjct: 62  NLMDVEFLYFFTQLKRKSSSSSRILRTVGTGTWHGDTSGKPVLDRKTKKVIGLIKKFHYK 121

Query: 124 KDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNE 163
           K KS HNG W+M EYSL         +SSD VLC ++ N+
Sbjct: 122 KPKSAHNGGWLMREYSLVG-------QSSDCVLCCLKMNK 154

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448878|ref|XP_004142192.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus] gi|449516019|ref|XP_004165045.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus]

 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/169 (45%), Positives = 104/169 (61%), Gaps = 18/169 (10%)

Query: 7   PLPL----GCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGG 62
           PLPL    G KF+P+D+ L+  YL  KI G   P+    V   +LYG  EPW+IW+ FGG
Sbjct: 9   PLPLNHYVGVKFRPTDQQLLH-YLHCKIYG--QPYFQGAVFDFDLYGGVEPWEIWQSFGG 65

Query: 63  PDLEDGEDLYFFTPLKKKSVNG----SRIDRRVG--TGTWQGEDAGKAV-VSRKSKKKIG 115
            D   GEDLYFFT LK+ + N     + I+R++G   GTW GE++   + V++  ++ IG
Sbjct: 66  ID---GEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIG 122

Query: 116 SKKRFRYEKDK-SPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNE 163
            +KRFRYE +    H+G WIMHEYSL+P  L       + VLCRIRKN+
Sbjct: 123 YRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQ 171

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577785|ref|XP_002529767.1| transcription factor, putative [Ricinus communis] gi|223530765|gb|EEF32633.1| transcription factor, putative [Ricinus communis]

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 26/239 (10%)

Query: 1   MERTRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVR-TENLYGFKEPWQIWRQ 59
           ME+    LP GC+F+P+DE LV  YLF K +      V+++V    +LYG KEPW++W Q
Sbjct: 1   MEQFLATLPSGCRFKPTDEELVAIYLFKKTNNLNLSDVENMVVPVCDLYGDKEPWELWDQ 60

Query: 60  FGGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAV---VSRKSKKKI-- 114
           F    L    DL+FFT LKKK    SRI RRVG GTW GE+ G+ V   V   + K++  
Sbjct: 61  FAQNQLFINGDLFFFTELKKKP-KSSRILRRVGKGTWHGENKGEPVNVLVDVGNAKQLMI 119

Query: 115 -GSKKRFRYEKDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVF 173
             +KKRF Y    S H+  WI+HE+SL+         S++ VLCR+R N  +      V 
Sbjct: 120 QATKKRFSYRNQNSAHHCRWILHEFSLDNV-------STNWVLCRLRNNH-VSDSDNSVL 171

Query: 174 VEEHQYHYLQEIQPQ---PSTELAP-------HNHLQSFQNHHLMQQSPACFFRAQEEN 222
           V E      +  +     P+TE+ P        +             S AC   A+++N
Sbjct: 172 VLERVSSKRKNAEADDQCPNTEIVPSEKRLRTSDKCTDLIARTEFDSSKACIVVAEQDN 230

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580284|ref|XP_002530971.1| transcription factor, putative [Ricinus communis] gi|223529447|gb|EEF31406.1| transcription factor, putative [Ricinus communis]

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 102/169 (60%), Gaps = 21/169 (12%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAP---FVDDLVRTENLYGFKEPWQIWRQFGGPD 64
           LP G +F P+D+ LV  YL N+++  P     F+ ++    ++YG  EPWQIW   G  D
Sbjct: 13  LPPGYRFDPTDQELVLHYLLNRVARKPLSCQYFISEI----DIYGDMEPWQIWDSLGKAD 68

Query: 65  LEDGEDLYFFTPLKKKSVNGSRIDRRVGT--GTWQGEDAGKAVVSRKSKKKIGSKKRFRY 122
               + LY FTPLKK++ NGS I RR+G+  G+W GED+GK       K    ++KRFRY
Sbjct: 69  ---NDVLYVFTPLKKRAANGSTILRRIGSNGGSWHGEDSGKEFKLNGVK---WTQKRFRY 122

Query: 123 EKDKS-PHNGCWIMHEYSLNPSLL-----PQNLRSSDLVLCRIRKNEDI 165
           E  K  PH+G W+M EYSL+ SL+      +N  +  +VLCRI+KNE I
Sbjct: 123 ENRKCKPHDGAWLMQEYSLDQSLVNKIKEKRNDDNEIIVLCRIKKNERI 171

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442783|ref|XP_004139160.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus] gi|449485396|ref|XP_004157155.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus]

 Score =  127 bits (318), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/171 (43%), Positives = 104/171 (60%), Gaps = 18/171 (10%)

Query: 7   PLPL----GCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGG 62
           PLPL    G KF+P+D+ L+  YL  KI G   P+    V   +LYG  EPW+IW+ FGG
Sbjct: 13  PLPLNHYVGLKFRPTDQQLLH-YLHCKIYG--QPYFQGAVFDFDLYGGVEPWEIWQSFGG 69

Query: 63  PDLEDGEDLYFFTPLKKKSVN----GSRIDRRVG--TGTWQGEDAGKAV-VSRKSKKKIG 115
            D   GEDLYFFT LK+ + N     + ++R++G   GTW GE++   + V+   ++ IG
Sbjct: 70  ID---GEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIG 126

Query: 116 SKKRFRYEKDK-SPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDI 165
            +KRFRYE +    H+G WIMHEYS++   L      S+ VLCR+RKNE +
Sbjct: 127 YRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERV 177

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577787|ref|XP_002529768.1| conserved hypothetical protein [Ricinus communis] gi|223530766|gb|EEF32634.1| conserved hypothetical protein [Ricinus communis]

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 108/205 (52%), Gaps = 19/205 (9%)

Query: 1   MERTRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVR-TENLYGFKEPWQIWRQ 59
           M++    LP GC+F P+DE LV  YLF K        V++++    +LYG KEPW++W Q
Sbjct: 1   MDQFLATLPTGCRFSPTDEELVAMYLFKKTKNLNLSDVENMIVPVCDLYGDKEPWELWDQ 60

Query: 60  FGGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAV---VSRKSKKKI-- 114
           F    L    DLYFFT LKKK    SRI RRVG GTW GE+  + V   +   S K++  
Sbjct: 61  FSQNQLFTNGDLYFFTELKKKP-KSSRISRRVGKGTWHGENKREPVNVLLDVGSAKQLMI 119

Query: 115 -GSKKRFRYEKDKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVF 173
             +KKRF Y    S H+  WI+HE+SL+         S++ VLCR+R N  +      V 
Sbjct: 120 QATKKRFNYRNQNSAHHCRWILHEFSLDNV-------STNWVLCRLRNNH-VSDSVNSVL 171

Query: 174 VEEHQYHYLQEIQPQ---PSTELAP 195
           V E      +  +     P++E+ P
Sbjct: 172 VLERVSSNGKNAEADEQCPNSEIVP 196

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457267|ref|XP_004146370.1| PREDICTED: NAC domain-containing protein 90-like [Cucumis sativus]

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 12/157 (7%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
           +P+G  F P++E L+ +YL+NK+ G   P +  ++   +LY  +EP QIW+Q  G D   
Sbjct: 6   IPVGYIFCPTEEELLGYYLYNKVLGGQTPPL--VLPVIDLYT-QEPSQIWQQCRGVD--- 59

Query: 68  GEDLYFFTPLKKKSVNGSRIDRRVGT--GTWQGEDAGKAVVSRKSKKKI-GSKKRFRYEK 124
            +D+YFFT L+KK    SRI R++G+  GTW GE+  + V S      + G+ KRFRYEK
Sbjct: 60  NQDIYFFTTLQKKK---SRIIRKIGSNGGTWSGENKPQQVFSSIIDNLLLGTMKRFRYEK 116

Query: 125 DKSPHNGCWIMHEYSLNPSLLPQNLRSSDLVLCRIRK 161
            +   +  WIM+EY+LNPS++P+ L     VLC IRK
Sbjct: 117 SQVKEDCTWIMYEYTLNPSIVPEGLVHDSYVLCMIRK 153

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	300
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.496	0.588	0.349	1.4e-14
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.466	0.494	0.351	1.5e-14
TAIR|locus:2016049	324	VND7 "vascular related NAC-dom	0.93	0.861	0.264	2.8e-14
TAIR|locus:2019833	371	SMB "SOMBRERO" [Arabidopsis th	0.82	0.663	0.254	7.3e-14
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.79	0.75	0.241	1.9e-13
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.47	0.392	0.300	5e-13
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.653	0.538	0.283	1.5e-12
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.5	0.559	0.321	1.8e-12
TAIR|locus:2179877	252	NAC083 "NAC domain containing	0.493	0.587	0.325	8.7e-12
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.496	0.510	0.320	9.1e-12

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 64/183 (34%), Positives = 88/183 (48%)

Query:     9 PLGCKFQPSDELLVQFYLFNKISGTP--APFVDDLVRTENLYGFKEPWQIWRQFGGPDLE 66
             P G +F P+DE LV  YL  K +  P  AP + +L    +LY + +PW +      PD+ 
Sbjct:    11 PPGFRFHPTDEELVLMYLCRKCASQPIPAPIITEL----DLYRY-DPWDL------PDMA 59

Query:    67 -DGE-DLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXXYEK 124
               GE + YFF+P  +K  NGSR +R  GTG W+   A K +                +  
Sbjct:    60 LYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPI---GRPKPVGIKKALVFYS 116

Query:   125 DKSPHNG---CWIMHEYSL---NPSLLPQN-LRSSDLVLCRI--------RKNEDIDQPA 169
              K P NG    WIMHEY L   + S+  +N LR  D VLCRI        ++  DI+   
Sbjct:   117 GKPP-NGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGVIEKRRSDIEDGL 175

Query:   170 EPV 172
             +PV
Sbjct:   176 KPV 178

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 57/162 (35%), Positives = 79/162 (48%)

Query:     8 LPLGCKFQPSDELLVQFYLFNKISGTP--APFVDDLVRTENLYGFKEPWQIWRQFGGPDL 65
             LP G +F P+DE LV+FYL  K +     AP + ++    +LY F  PW++      P++
Sbjct:     7 LPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEI----DLYKFN-PWEL------PEM 55

Query:    66 E-DGE-DLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXXYE 123
                GE + YFF+P  +K  NGSR +R  GTG W+   A K +                 +
Sbjct:    56 SLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGK 115

Query:   124 KDKSPHNGCWIMHEYSL-----NPSLLPQN-LRSSDLVLCRI 159
               K      WIMHEY L     + S+  +N LR  D VLCRI
Sbjct:   116 APKGIKTN-WIMHEYRLANVDRSASVNKKNNLRLDDWVLCRI 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2016049 VND7 "vascular related NAC-domain protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 2.8e-14, P = 2.8e-14
 Identities = 80/302 (26%), Positives = 125/302 (41%)

Query:     1 MERTRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQF 60
             M+ + PP   G +F P++E LV +YL  KI+   +    D++   +LY   EPW I  + 
Sbjct:     5 MQSSMPP---GFRFHPTEEELVGYYLDRKINSMKSAL--DVIVEIDLYKM-EPWDIQARC 58

Query:    61 GGPDLEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXX 120
                  E+  + YFF+   +K   G+R +R    G W+     KAV+              
Sbjct:    59 K-LGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSVIGMRKTLV- 116

Query:   121 XYEKDKSPHN--GCWIMHEYSL-NPSLLPQNLRSSDLVLCR-IRKNEDIDQPA--EPVFV 174
              Y K ++P+     WIMHEY L N  L P  ++    V+CR  RK     +P   EP   
Sbjct:   117 -YYKGRAPNGRKSDWIMHEYRLQNSELAP--VQEEGWVVCRAFRKPIPNQRPLGYEPW-- 171

Query:   175 EEHQYHYLQEIQPQPSTELAPHNHLQSFQNHHLMQQSPACFFRAQEENYQQSMTQEDPHE 234
             +   YH         S  +   +H+ +  + H + Q           N   SM Q    E
Sbjct:   172 QNQLYHVESSNNYSSSVTMNTSHHIGASSSSHNLNQMLMSNNHYNPNNTSSSMHQYGNIE 231

Query:   235 LELSDSHQNMQDTPVTEQNSHEQLQLSAETHQHFTSSDLQEYQQMPVTDQI-PHHQLQLS 293
             L   DS  ++  +  T ++ +E  +   E  + F   D +    +  T  I PH+   L 
Sbjct:   232 LPQLDS-PSLSPSLGTNKDQNESFE--QEEEKSFNCVDWRTLDTLLETQVIHPHNPNILM 288

Query:   294 FE 295
             FE
Sbjct:   289 FE 290

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2019833 SMB "SOMBRERO" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
 Identities = 69/271 (25%), Positives = 117/271 (43%)

Query:     8 LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQ--FG-GPD 64
             +P G +F P++E L+ +YL  K+S  P     D++R  +L    EPW++  +   G GP 
Sbjct:    17 VPPGFRFHPTEEELLYYYLKKKVSYEPIDL--DVIREVDLNKL-EPWELKEKCRIGSGPQ 73

Query:    65 LEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXXYEK 124
              E     YFF+   KK   G+R +R    G W+     K++                Y  
Sbjct:    74 NE----WYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYT- 128

Query:   125 DKSPHNGC--WIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVFVEEHQYHYL 182
              ++PH     WIMHEY L+ S     ++    V+CR+ K ++  +       ++H +H+ 
Sbjct:   129 GRAPHGQKTEWIMHEYRLDDS--ENEIQEDGWVVCRVFKKKNHFRGFHQEQEQDHHHHH- 185

Query:   183 QEIQPQPSTELAPHNHLQSFQNHHLMQQSPACFFRAQEENYQQSMTQED--P-HELELSD 239
             Q I      +   H+H+ S  N+H    SP         ++   + ++   P HE   + 
Sbjct:   186 QYISTNNDHD--HHHHIDSNSNNH----SPLILHPLDHHHHHHHIGRQIHMPLHEFANTL 239

Query:   240 SHQNMQDTPVTEQNSHEQLQLSAETHQHFTS 270
             SH +M    +   +S      +A + Q F S
Sbjct:   240 SHGSMHLPQLFSPDSAAAAAAAAASAQPFVS 270

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010455 "positive regulation of cell fate commitment" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0003002 "regionalization" evidence=IMP

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 61/253 (24%), Positives = 106/253 (41%)

Query:     8 LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
             LP G +F P+DE L+ +YL NKI+     F    +   +L    EPW++  +        
Sbjct:    16 LPPGFRFHPTDEELISYYLVNKIADQN--FTGKAIADVDL-NKSEPWELPEKAK----MG 68

Query:    68 GEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXXYEKDKS 127
             G++ YFF+   +K   G R +R   TG W+     K +                + + ++
Sbjct:    69 GKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRA 128

Query:   128 PHNG--CWIMHEYSLNPSLLPQNLRSSDLVLCRIRKNEDIDQPAEPVFVEEHQYHYLQEI 185
             P     CW+MHEY L+     +  +  + V+CR+ K  +  +           +H+    
Sbjct:   129 PRGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNNHT 188

Query:   186 QPQPSTELAPHNHLQSFQNHHLMQQSPACFFRAQEENYQQSMTQEDPHELELSDSHQNMQ 245
             +   ++ L+ +N+  ++ +  L  Q P         N  QS+     H  ELS   +   
Sbjct:   189 R---ASILSTNNNNPNYSSDLL--QLPPHLQPHPSLNINQSLMANAVHLAELSRVFR--A 241

Query:   246 DTPVTEQNSHEQL 258
              T  T  +SH+QL
Sbjct:   242 STSTTMDSSHQQL 254

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
 Identities = 46/153 (30%), Positives = 71/153 (46%)

Query:     5 RPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPD 64
             R  LP G +F P+DE L+  YL  K+S +P P    ++   ++Y   +PW +  +   P 
Sbjct:     7 RSSLPPGFRFHPTDEELILHYLRKKVSSSPVPL--SIIADVDIYK-SDPWDLPAK--APF 61

Query:    65 LEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVX---XXXXXXXXXXXXXX 121
              E  ++ YFF+P  +K  NG+R +R   +G W+     K +                   
Sbjct:    62 GE--KEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALV 119

Query:   122 YEKDKSPHN--GCWIMHEYSLNPSLLPQNLRSS 152
             + + K P      WIMHEY L  SL P+ + SS
Sbjct:   120 FYRGKPPKGVKTNWIMHEYRLADSLSPKRINSS 152

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 63/222 (28%), Positives = 98/222 (44%)

Query:     5 RPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPD 64
             +P LP G +F P+DE LV  YL  K +  P P    ++   +LY F +PW++  +    +
Sbjct:    14 QPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVA--IIAEVDLYKF-DPWELPAKASFGE 70

Query:    65 LEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXXYEK 124
                 ++ YFF+P  +K  NG+R +R   +G W+     K V+               +  
Sbjct:    71 ----QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYS 126

Query:   125 DKSPHN--GCWIMHEYSL---NPSLLP---------QNLRSSDLVLCRIRKNEDIDQPAE 170
              K P      WIMHEY L    P+  P          +LR  D VLCRI K  +  +  +
Sbjct:   127 GKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNASRHVD 186

Query:   171 PVFVEEHQY-HYLQEIQPQPSTELAPHNHLQSFQNHHLMQQS 211
                 ++H    Y+    P PS  +A  +     Q+HH + +S
Sbjct:   187 ND--KDHDMIDYIFRKIP-PSLSMAAAS-TGLHQHHHNVSRS 224

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 55/171 (32%), Positives = 81/171 (47%)

Query:     1 MERT-RPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQ 59
             ME T +  LP G +F P+DE L+ +YL N+    P P    ++   ++Y F +PWQ+   
Sbjct:     1 MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPV--SIIPEVDIYKF-DPWQL--- 54

Query:    60 FGGPD-LEDGE-DLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXX 117
                P+  E GE + YFF+P ++K  NG R +R   +G W+     KA+            
Sbjct:    55 ---PEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAI--HSGSSNVGVK 109

Query:   118 XXXXYEKDKSPHN--GCWIMHEYSLNPSLLPQNLRSSDL-----VLCRIRK 161
                 + K + P      WIMHEY L+ S      R+  +     VLCRI K
Sbjct:   110 KALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYK 160

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2179877 NAC083 "NAC domain containing protein 83" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 8.7e-12, P = 8.7e-12
 Identities = 55/169 (32%), Positives = 81/169 (47%)

Query:     8 LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
             LP G +F P+DE LV  YL  K+  +P P    ++   ++    +PW +     G +LE 
Sbjct:    14 LPPGFRFHPTDEELVVQYLKRKVCSSPLPA--SIIPEFDVCR-ADPWDL----PG-NLE- 64

Query:    68 GEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXXYEKDKS 127
              ++ YFF+  + K  NG+R +R  G+G W+     K VV               + K K 
Sbjct:    65 -KERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYKGKP 123

Query:   128 PHNGC--WIMHEYSLNPSLLPQNLR-SSDLVLCRI-------RKNEDID 166
             PH     WIMHEY L+ S  P ++  + + VLCRI        KN+D D
Sbjct:   124 PHGSRTDWIMHEYRLSSSP-PSSMGPTQNWVLCRIFLKKRAGNKNDDDD 171

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010150 "leaf senescence" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 9.1e-12, P = 9.1e-12
 Identities = 52/162 (32%), Positives = 77/162 (47%)

Query:     8 LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
             LP G +F P+DE L+++YL  K+ G       +++   +LY F +PW++  +   P+  D
Sbjct:     6 LPPGFRFHPTDEELIEYYLKRKVEGLEIEL--EVIPVIDLYSF-DPWELPDKSFLPN-RD 61

Query:    68 GEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXXYEKDKS 127
              E  YFF    KK  NG R +R    G W+     + +                Y K ++
Sbjct:    62 ME-WYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSSSIIGYRKTLVFY-KGRA 119

Query:   128 P--HNGCWIMHEYSL---NPSLLPQNLRSSDLVLCRIR-KNE 163
             P      WIMHEY L   + S   QNL+ +  VLCR+  KNE
Sbjct:   120 PLGDRSNWIMHEYRLCDDDTSQGSQNLKGA-FVLCRVAMKNE 160

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	300
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	4e-28

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  104 bits (263), Expect = 4e-28
 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 14/138 (10%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
           LP G +F P+DE LV +YL  K+ G P P + D++   ++Y F EPW +     G     
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLP-LLDVIPEVDIYKF-EPWDL---PDGKAKGG 55

Query: 68  GEDLYFFTPLKKKSVNGSRIDRRVGTGTW--QGEDAGKAVVSRKSKKKIGSKKRFRYEKD 125
             + YFF+P  +K  NGSR +R  G+G W   G+D  K V+S+   + +G KK   + K 
Sbjct: 56  DREWYFFSPRDRKYPNGSRTNRATGSGYWKATGKD--KPVLSKGG-EVVGMKKTLVFYKG 112

Query: 126 KSPHNGC---WIMHEYSL 140
           ++P  G    W+MHEY L
Sbjct: 113 RAP-KGEKTDWVMHEYRL 129

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	300
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=8.4e-42  Score=284.86  Aligned_cols=127  Identities=40%  Similarity=0.748  Sum_probs=92.3

Q ss_pred             CCCCCeeCCChHHHHHHHHhhhhcCCCCCCccceeecccccCCCCccchhhhcCCCCCCCCCceEEEecCcccCCCCCcc
Q 047622            8 LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVNGSRI   87 (300)
Q Consensus         8 LPpGfRF~PTDeELV~~YL~~Ki~g~~lp~~~~I~d~DdvY~~~~PwdLp~~~~~~~~~~~~ewYFFs~r~~k~~~G~R~   87 (300)
                      |||||||+|||+|||.+||++|+.|.+++....|.++| ||+ +|||+|+..+.    .++++||||+++.+++.+|.|.
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~D-iy~-~~P~~L~~~~~----~~~~~~yFF~~~~~~~~~~~r~   74 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVD-IYS-AHPWELPAKFK----GGDEEWYFFSPRKKKYPNGGRP   74 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE---GGG-S-GGGCHHHSS----S-SSEEEEEEE----------S
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecc-cCc-cChHHhhhhcc----CCCceEEEEEecccccCCcccc
Confidence            89999999999999999999999999988755688887 995 89999995432    3567999999999999999999


Q ss_pred             ccccccceeeecCCCceEEeCCCCceeeeEEEEEeecCCCC--CCcCeEEEEEEeC
Q 047622           88 DRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSP--HNGCWIMHEYSLN  141 (300)
Q Consensus        88 ~R~~g~G~Wk~tG~~k~I~~~~~g~viG~KktL~Fy~g~~~--~kT~WvMhEY~l~  141 (300)
                      +|++++|+||++|+.++|.+. ++.+||+|++|+||.++.+  .+|+|+||||+|.
T Consensus        75 ~R~~~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   75 NRVTGGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             -EEETTEEEEEECEEEEEEE--TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cccccceEEeecccccccccc-cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999999999999999975 7899999999999976443  4899999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	300
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		7e-13
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		9e-12
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-11

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 8   LPLGCKFQPSDELLVQFYLFNKISG--TPAPFVDDLVRTENLYGFKEPWQIWRQFGGPD- 64
           LP G +F P+D+ LV+ YL  K +G   P P + ++    +LY F +PW +      P+ 
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEV----DLYKF-DPWDL------PER 63
Query: 65  -LEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXXYE 123
            L    + YFFTP  +K  NGSR +R  G G W+   A K V                  
Sbjct: 64  ALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAG 123
Query: 124 KDKSPHNGCWIMHEYSL------NPSLLPQNLRSSDLVLCRI--RKNE 163
           K        WIMHEY L             +LR  D VLCR+  +KNE
Sbjct: 124 KAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 4   TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGP 63
           T+  LP G +F P+DE L+  YL  K +G    F   L+   +LY F +PW +      P
Sbjct: 13  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYD--FSLQLIAEIDLYKF-DPWVL------P 63
Query: 64  D--LEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXX 121
           +  L   ++ YFF+P  +K  NGSR +R  G+G W+     K +                
Sbjct: 64  NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY 123
Query: 122 YEKDKSPHNGCWIMHEYSL-NPSLLPQNLRSSDLVLCRIRKNEDIDQ 167
             K        WIMHEY L  PS    + +  D VLCRI K +   Q
Sbjct: 124 IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 170

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 4   TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGP 63
           T+  LP G +F P+DE L+  YL  K +G    F   L+   +LY F +PW +      P
Sbjct: 16  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYD--FSLQLIAEIDLYKF-DPWVL------P 66
Query: 64  D--LEDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVXXXXXXXXXXXXXXX 121
           +  L   ++ YFF+P  +K  NGSR +R  G+G W+     K +                
Sbjct: 67  NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY 126
Query: 122 YEKDKSPHNGCWIMHEYSL-NPSLLPQNLRSSDLVLCRIRKNEDIDQ 167
             K        WIMHEY L  PS    + +  D VLCRI K +   Q
Sbjct: 127 IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 173

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	300
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	8e-28
1ut7_A	171	No apical meristem protein; transcription regulati	2e-27

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  105 bits (263), Expect = 8e-28
 Identities = 56/163 (34%), Positives = 76/163 (46%), Gaps = 19/163 (11%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
           LP G +F P+D+ LV+ YL  K +G   P    ++   +LY F +PW +        L  
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPV--PIIAEVDLYKF-DPWDL----PERALFG 67

Query: 68  GEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKS 127
             + YFFTP  +K  NGSR +R  G G W+   A K V      + +G KK   +   K+
Sbjct: 68  AREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP--RGRTLGIKKALVFYAGKA 125

Query: 128 PHNGC---WIMHEYSLNPSLLPQN------LRSSDLVLCRIRK 161
           P  G    WIMHEY L  +           LR  D VLCR+  
Sbjct: 126 PR-GVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYN 167

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  103 bits (260), Expect = 2e-27
 Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 18/160 (11%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPD--L 65
           LP G +F P+DE L+  YL  K +G        L+   +LY F +PW +      P+  L
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSL--QLIAEIDLYKF-DPWVL------PNKAL 67

Query: 66  EDGEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKD 125
              ++ YFF+P  +K  NGSR +R  G+G W+     K + +    +++G KK   +   
Sbjct: 68  FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIG 125

Query: 126 KSPHNGC---WIMHEYSL-NPSLLPQNLRSSDLVLCRIRK 161
           K+P  G    WIMHEY L  PS    + +  D VLCRI K
Sbjct: 126 KAPK-GTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYK 164

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	300
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.3e-52  Score=366.36  Aligned_cols=152  Identities=35%  Similarity=0.643  Sum_probs=126.6

Q ss_pred             CCCCCCCCCeeCCChHHHHHHHHhhhhcCCCCCCccceeecccccCCCCccchhhhcCCCCCCCCCceEEEecCcccCCC
Q 047622            4 TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVN   83 (300)
Q Consensus         4 ~~~~LPpGfRF~PTDeELV~~YL~~Ki~g~~lp~~~~I~d~DdvY~~~~PwdLp~~~~~~~~~~~~ewYFFs~r~~k~~~   83 (300)
                      ..+.|||||||+|||||||.|||++|+.|.+++.. .|.++| || ++|||+||+...    .++.+|||||++++||++
T Consensus        11 ~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~-~I~evD-vy-~~~Pw~Lp~~~~----~g~~ewYFFs~r~~ky~~   83 (174)
T 3ulx_A           11 AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVP-IIAEVD-LY-KFDPWDLPERAL----FGAREWYFFTPRDRKYPN   83 (174)
T ss_dssp             STTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSS-CCEECC-GG-GSCGGGSGGGCS----SCSSEEEEEEECCC----
T ss_pred             cccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcC-eeeecc-cc-cCCchhhhhhhc----cCCceEEEEeccccccCC
Confidence            45689999999999999999999999999999864 588888 99 489999998643    456799999999999999


Q ss_pred             CCccccccccceeeecCCCceEEeCCCCceeeeEEEEEeecCCCCC--CcCeEEEEEEeCCCCCCC------CCCCCCeE
Q 047622           84 GSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPH--NGCWIMHEYSLNPSLLPQ------NLRSSDLV  155 (300)
Q Consensus        84 G~R~~R~~g~G~Wk~tG~~k~I~~~~~g~viG~KktL~Fy~g~~~~--kT~WvMhEY~l~~~~~~~------~~~~~~~V  155 (300)
                      |.|.+|++++||||++|++|+|.+  +|.+||+||+|+||.|+++.  ||+|+||||+|.......      .+..++||
T Consensus        84 g~R~nR~t~~G~WkatG~dk~I~~--~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wV  161 (174)
T 3ulx_A           84 GSRPNRAAGNGYWKATGADKPVAP--RGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWV  161 (174)
T ss_dssp             -CCSCEEETTEEEEECSCCEEECC--SSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEE
T ss_pred             CCCceeecCCceEccCCCCcEEee--CCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEE
Confidence            999999999999999999999985  47999999999999998764  899999999999864321      13468999


Q ss_pred             EEEEEEcCC
Q 047622          156 LCRIRKNED  164 (300)
Q Consensus       156 LCrI~kk~~  164 (300)
                      |||||+|.+
T Consensus       162 lCrvf~K~~  170 (174)
T 3ulx_A          162 LCRLYNKKN  170 (174)
T ss_dssp             EEEEEESCC
T ss_pred             EEEEEEcCC
Confidence            999998764

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=6.4e-52  Score=361.33  Aligned_cols=153  Identities=33%  Similarity=0.576  Sum_probs=123.6

Q ss_pred             CCCCCCCCCeeCCChHHHHHHHHhhhhcCCCCCCccceeecccccCCCCccchhhhcCCCCCCCCCceEEEecCcccCCC
Q 047622            4 TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVN   83 (300)
Q Consensus         4 ~~~~LPpGfRF~PTDeELV~~YL~~Ki~g~~lp~~~~I~d~DdvY~~~~PwdLp~~~~~~~~~~~~ewYFFs~r~~k~~~   83 (300)
                      ....|||||||+|||||||.|||++|+.|.+++.. .|.++| || .+|||+||+...    .++.+|||||++++||++
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~-~I~e~D-iy-~~~Pw~Lp~~~~----~g~~ewyFFs~r~~k~~~   85 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ-LIAEID-LY-KFDPWVLPNKAL----FGEKEWYFFSPRDRKYPN   85 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSC-CSEECC-GG-GSCGGGHHHHSS----SCSSEEEEEEECCC----
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCC-eEeecc-cc-cCChhHhhchhh----cCCccEEEEeccccccCC
Confidence            35689999999999999999999999999999864 588888 99 489999998742    457899999999999999


Q ss_pred             CCccccccccceeeecCCCceEEeCCCCceeeeEEEEEeecCCCCC--CcCeEEEEEEeCCCCCC-CCCCCCCeEEEEEE
Q 047622           84 GSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPH--NGCWIMHEYSLNPSLLP-QNLRSSDLVLCRIR  160 (300)
Q Consensus        84 G~R~~R~~g~G~Wk~tG~~k~I~~~~~g~viG~KktL~Fy~g~~~~--kT~WvMhEY~l~~~~~~-~~~~~~~~VLCrI~  160 (300)
                      |.|.+|+|++||||++|++|+|.+  ++.+||+||+|+||.|+++.  ||+|+||||+|...... .....++|||||||
T Consensus        86 g~R~~R~t~~G~Wk~tG~~k~I~~--~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~  163 (171)
T 1ut7_A           86 GSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY  163 (171)
T ss_dssp             ---CCEEETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEE
T ss_pred             CCcccccCCCCEEeccCCCceEEe--cCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEE
Confidence            999999999999999999999996  46999999999999998764  89999999999876421 12346899999999


Q ss_pred             EcCCC
Q 047622          161 KNEDI  165 (300)
Q Consensus       161 kk~~~  165 (300)
                      +|...
T Consensus       164 ~k~~~  168 (171)
T 1ut7_A          164 KKQSS  168 (171)
T ss_dssp             ECC--
T ss_pred             EcCCC
Confidence            98753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	300
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	3e-32

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  115 bits (289), Expect = 3e-32
 Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 12/159 (7%)

Query: 8   LPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLED 67
           LP G +F P+DE L+  YL  K +G    F   L+   +LY F +PW +        L  
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYD--FSLQLIAEIDLYKF-DPWVLP----NKALFG 69

Query: 68  GEDLYFFTPLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKS 127
            ++ YFF+P  +K  NGSR +R  G+G W+     K + +    +++G KK   +   K+
Sbjct: 70  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKA 127

Query: 128 P--HNGCWIMHEYSL-NPSLLPQNLRSSDLVLCRIRKNE 163
           P      WIMHEY L  PS    + +  D VLCRI K +
Sbjct: 128 PKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	300
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-49  Score=341.41  Aligned_cols=151  Identities=33%  Similarity=0.590  Sum_probs=122.5

Q ss_pred             CCCCCCCCCeeCCChHHHHHHHHhhhhcCCCCCCccceeecccccCCCCccchhhhcCCCCCCCCCceEEEecCcccCCC
Q 047622            4 TRPPLPLGCKFQPSDELLVQFYLFNKISGTPAPFVDDLVRTENLYGFKEPWQIWRQFGGPDLEDGEDLYFFTPLKKKSVN   83 (300)
Q Consensus         4 ~~~~LPpGfRF~PTDeELV~~YL~~Ki~g~~lp~~~~I~d~DdvY~~~~PwdLp~~~~~~~~~~~~ewYFFs~r~~k~~~   83 (300)
                      +.++|||||||+|||||||.+||++|+.|.+++.. .|.++| || +++||+||+.+.    .++++||||+++.+++++
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~-~I~~~D-vy-~~~Pw~Lp~~~~----~~~~~wyFft~~~~k~~~   85 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ-LIAEID-LY-KFDPWVLPNKAL----FGEKEWYFFSPRDRKYPN   85 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSC-CSEECC-GG-GSCGGGHHHHSS----SCSSEEEEEEECCC----
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcc-cceecc-CC-cCChhhccchhc----cCcceEEEEeeeccccCC
Confidence            56789999999999999999999999999999865 588988 99 589999998643    457789999999999999


Q ss_pred             CCccccccccceeeecCCCceEEeCCCCceeeeEEEEEeecCCCCC--CcCeEEEEEEeCCCCCCC-CCCCCCeEEEEEE
Q 047622           84 GSRIDRRVGTGTWQGEDAGKAVVSRKSKKKIGSKKRFRYEKDKSPH--NGCWIMHEYSLNPSLLPQ-NLRSSDLVLCRIR  160 (300)
Q Consensus        84 G~R~~R~~g~G~Wk~tG~~k~I~~~~~g~viG~KktL~Fy~g~~~~--kT~WvMhEY~l~~~~~~~-~~~~~~~VLCrI~  160 (300)
                      |.|.+|++++|+||++|+++.|.+  +|.+||+||+|+||.++.+.  +|+|+||||+|......+ ....++|||||||
T Consensus        86 g~r~~R~~g~G~Wk~~g~~~~i~~--~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~  163 (166)
T d1ut7a_          86 GSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY  163 (166)
T ss_dssp             ---CCEEETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEE
T ss_pred             CCccccccCCCEecccCCCceEec--CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEE
Confidence            999999999999999999998875  57999999999999987664  899999999998754322 2346789999999


Q ss_pred             EcC
Q 047622          161 KNE  163 (300)
Q Consensus       161 kk~  163 (300)
                      +|.
T Consensus       164 ~Kk  166 (166)
T d1ut7a_         164 KKQ  166 (166)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            873