Citrus Sinensis ID: 047793

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
IAASQVTSRKLQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLTSRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA
cEEEEccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEcccccccccccccccccccccccEEEEEEEEcccccccEEEEEEcccccccccccEEEEEccccccccccccccccccccc
ccHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHccccccccccccccEEccccccccccccEEHHHHcccccccEccccEcHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHccEccEcccEcccHHHHHHHHHHHccEcEccccccccccccccHHHHHcccEcccEEEEcccccHHHHHHHHHHccEEEEEccccHHHHHccccEEcccccccccEEEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEccccccccHHHcccccEEEEc
IAASQVTSRKLQEASLSEKHEQWMSKYGkvyknpeekeKRFRIFKDNVEFIESLnaagnkpyklSINEFADQTNQEFKAFrngyrrpdgltsrkgtsfkyenvidvpatmdwrkngavtpiknqgpcgscwaFSAVAATEGitqlttgklislseqelvscdtsgvdhgceggemEDAFKFIIhndgitteanypyqavdgtcnktneasHVAKIkgyetvpanSEEALLKAVANqpvavsidasgsafqfyssgvftgdcgteldhgvtavgygatangTKYWLVKnswgtswgeegyIRMKRDIDAKEglcgiamdssypta
iaasqvtsrklqeaslsekheqwmskygkvyknpeekeKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKafrngyrrpdgltsrkgtsfkyenvIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYgatangtkywLVKNSWGTSWGEEGYIRMKRDIDAKEGlcgiamdssypta
IAASQVTSRKLQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLTSRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA
***************************************RFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGY**********GTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIA********
IAASQV*SRKLQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRN********************VIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA
*******************HEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLTSRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA
IAASQVTSRKLQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRP*****RKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA
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IAASQVTSRKLQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLTSRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query324 2.2.26 [Sep-21-2011]
O65039360 Vignain OS=Ricinus commun N/A no 0.925 0.833 0.586 1e-99
Q9FGR9361 KDEL-tailed cysteine endo no no 0.941 0.844 0.579 4e-98
P43156360 Thiol protease SEN102 OS= N/A no 0.944 0.85 0.569 5e-98
P25803362 Vignain OS=Phaseolus vulg N/A no 0.947 0.848 0.560 1e-97
P12412362 Vignain OS=Vigna mungo PE N/A no 0.944 0.845 0.565 1e-97
P25249371 Cysteine proteinase EP-B N/A no 0.953 0.832 0.536 4e-94
P25250373 Cysteine proteinase EP-B N/A no 0.953 0.828 0.533 1e-93
Q9STL4361 KDEL-tailed cysteine endo no no 0.944 0.847 0.544 1e-91
P25777 466 Oryzain beta chain OS=Ory no no 0.953 0.663 0.514 7e-91
O65493355 Xylem cysteine proteinase no no 0.941 0.859 0.524 9e-90
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function desciption
 Score =  363 bits (931), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 180/307 (58%), Positives = 218/307 (71%), Gaps = 7/307 (2%)

Query: 20  HEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKA 79
           +E+W S +  V ++  EK+KRF +FK N   + + N   +KPYKL +N+FAD TN EF+ 
Sbjct: 38  YERWRSHH-TVSRSLHEKQKRFNVFKHNAMHVHNANKM-DKPYKLKLNKFADMTNHEFRN 95

Query: 80  FRNGYRRPDGLTSRKGT----SFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSA 135
             +G +       R G     +F YE V  VPA++DWRK GAVT +K+QG CGSCWAFS 
Sbjct: 96  TYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFST 155

Query: 136 VAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEANYP 195
           + A EGI Q+ T KL+SLSEQELV CDT   + GC GG M+ AF+FI    GITTEANYP
Sbjct: 156 IVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQRGGITTEANYP 214

Query: 196 YQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFYSSG 255
           Y+A DGTC+ + E +    I G+E VP N E ALLKAVANQPV+V+IDA GS FQFYS G
Sbjct: 215 YEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEG 274

Query: 256 VFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGI 315
           VFTG CGTELDHGV  VGYG T +GTKYW VKNSWG  WGE+GYIRM+R I  KEGLCGI
Sbjct: 275 VFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGI 334

Query: 316 AMDSSYP 322
           AM++SYP
Sbjct: 335 AMEASYP 341
Involved in programmed cell death.
Ricinus communis (taxid: 3988)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1 Back     alignment and function description
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description
>sp|P25249|CYSP1_HORVU Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1 Back     alignment and function description
>sp|P25250|CYSP2_HORVU Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1 Back     alignment and function description
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function description
>sp|P25777|ORYB_ORYSJ Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2 Back     alignment and function description
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query324
224099295342 predicted protein [Populus trichocarpa] 0.993 0.941 0.770 1e-147
224135841342 predicted protein [Populus trichocarpa] 0.993 0.941 0.773 1e-147
224121800342 predicted protein [Populus trichocarpa] 0.993 0.941 0.767 1e-146
255564908342 cysteine protease, putative [Ricinus com 0.993 0.941 0.726 1e-140
255564910341 cysteine protease, putative [Ricinus com 0.987 0.938 0.732 1e-138
356543124337 PREDICTED: vignain-like [Glycine max] gi 0.984 0.946 0.728 1e-137
356543116337 PREDICTED: KDEL-tailed cysteine endopept 0.984 0.946 0.728 1e-137
356515048350 PREDICTED: vignain-like [Glycine max] 0.978 0.905 0.727 1e-136
356577813 890 PREDICTED: uncharacterized protein LOC10 0.993 0.361 0.701 1e-135
356545063361 PREDICTED: thiol protease SEN102-like [G 0.993 0.891 0.701 1e-134
>gi|224099295|ref|XP_002334495.1| predicted protein [Populus trichocarpa] gi|222872550|gb|EEF09681.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/322 (77%), Positives = 275/322 (85%)

Query: 3   ASQVTSRKLQEASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPY 62
           A +V SR+LQE+ +S +HEQWM+ YGKVY +  EKE+RF+IFK+NVE+IES N AGNKPY
Sbjct: 21  AFEVASRELQESYMSARHEQWMATYGKVYVDAAEKERRFKIFKNNVEYIESFNTAGNKPY 80

Query: 63  KLSINEFADQTNQEFKAFRNGYRRPDGLTSRKGTSFKYENVIDVPATMDWRKNGAVTPIK 122
           KLS+N+FADQTN++FK  RNGYRRP      K TSFKYENV  VPATMDWRK GAVTPIK
Sbjct: 81  KLSVNKFADQTNEKFKGARNGYRRPFQTRPMKVTSFKYENVTAVPATMDWRKKGAVTPIK 140

Query: 123 NQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFI 182
           +QG CGSCWAFS VAATEGI QLTTGKL+SLSEQELV CD  G D GCEGG MED F+FI
Sbjct: 141 DQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQELVDCDNQGEDQGCEGGLMEDGFEFI 200

Query: 183 IHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSI 242
           I N GITTEANYPYQA DGTCN   +ASH+AKI GYE+VPANSE  LLK VANQP++VSI
Sbjct: 201 IKNHGITTEANYPYQAADGTCNSKKQASHIAKITGYESVPANSEAELLKVVANQPISVSI 260

Query: 243 DASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRM 302
           DA GS FQFYSSGVFTG CGTELDHGVTAVGYG T++GTKYWLVKNSW TSWGEEGYIRM
Sbjct: 261 DAGGSDFQFYSSGVFTGKCGTELDHGVTAVGYGETSDGTKYWLVKNSWXTSWGEEGYIRM 320

Query: 303 KRDIDAKEGLCGIAMDSSYPTA 324
           +RDIDA+EGLCGIAMDSSYPTA
Sbjct: 321 QRDIDAEEGLCGIAMDSSYPTA 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224135841|ref|XP_002327317.1| predicted protein [Populus trichocarpa] gi|222835687|gb|EEE74122.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224121800|ref|XP_002330656.1| predicted protein [Populus trichocarpa] gi|222872260|gb|EEF09391.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis] gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis] gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356543124|ref|XP_003540013.1| PREDICTED: vignain-like [Glycine max] gi|356543126|ref|XP_003540014.1| PREDICTED: vignain-like [Glycine max] Back     alignment and taxonomy information
>gi|356543116|ref|XP_003540009.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine max] Back     alignment and taxonomy information
>gi|356515048|ref|XP_003526213.1| PREDICTED: vignain-like [Glycine max] Back     alignment and taxonomy information
>gi|356577813|ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max] Back     alignment and taxonomy information
>gi|356545063|ref|XP_003540965.1| PREDICTED: thiol protease SEN102-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query324
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.969 0.907 0.547 1.8e-96
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.987 0.919 0.545 4.2e-95
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.941 0.844 0.579 3e-92
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.978 0.929 0.539 3e-92
TAIR|locus:2055440345 AT2G34080 [Arabidopsis thalian 0.972 0.913 0.510 8.6e-88
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.987 0.901 0.501 1.3e-86
TAIR|locus:2090614 452 AT3G19390 [Arabidopsis thalian 0.972 0.696 0.515 3.3e-86
TAIR|locus:2167821 463 RD21B "esponsive to dehydratio 0.950 0.665 0.534 5.4e-86
TAIR|locus:2825832 462 RD21A "responsive to dehydrati 0.941 0.660 0.512 3e-85
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.941 0.859 0.524 6.2e-85
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
 Identities = 177/323 (54%), Positives = 234/323 (72%)

Query:     8 SRKLQ-EASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA-GNKPYKLS 65
             SR L  E  + ++H +WM+K+G+VY + +E+  R+ +FK+NVE IE LN+    + +KL+
Sbjct:    25 SRPLDNELIMQKRHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLA 84

Query:    66 INEFADQTNQEFKAFRNGYRRPDGLTSRKGTS---FKYENVID--VPATMDWRKNGAVTP 120
             +N+FAD TN EF++   G++    L+S+  T    F+Y+NV    +P ++DWRK GAVTP
Sbjct:    85 VNQFADLTNDEFRSMYTGFKGVSALSSQSQTKMSPFRYQNVSSGALPVSVDWRKKGAVTP 144

Query:   121 IKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFK 180
             IKNQG CG CWAFSAVAA EG TQ+  GKLISLSEQ+LV CDT+  D GCEGG M+ AF+
Sbjct:   145 IKNQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTN--DFGCEGGLMDTAFE 202

Query:   181 FIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAV 240
              I    G+TTE+NYPY+  D TCN          I GYE VP N E+AL+KAVA+QPV+V
Sbjct:   203 HIKATGGLTTESNYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQPVSV 262

Query:   241 SIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYI 300
              I+  G  FQFYSSGVFTG+C T LDH VTA+GYG + NG+KYW++KNSWGT WGE GY+
Sbjct:   263 GIEGGGFDFQFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYM 322

Query:   301 RMKRDIDAKEGLCGIAMDSSYPT 323
             R+++D+  K+GLCG+AM +SYPT
Sbjct:   323 RIQKDVKDKQGLCGLAMKASYPT 345
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
GO:0009723 "response to ethylene stimulus" evidence=IEP
GO:0007568 "aging" evidence=IEP;TAS
GO:0010150 "leaf senescence" evidence=IEP;TAS
GO:0010282 "senescence-associated vacuole" evidence=IDA
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IEP
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055440 AT2G34080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825832 RD21A "responsive to dehydration 21A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65039CYSEP_RICCO3, ., 4, ., 2, 2, ., -0.58630.92590.8333N/Ano
Q5E998CATL2_BOVIN3, ., 4, ., 2, 2, ., 4, 30.41920.93510.9071yesno
P25249CYSP1_HORVU3, ., 4, ., 2, 2, ., -0.53620.95370.8328N/Ano
P06797CATL1_MOUSE3, ., 4, ., 2, 2, ., 1, 50.43610.93510.9071yesno
Q9GL24CATL1_CANFA3, ., 4, ., 2, 2, ., 1, 50.42360.93510.9099yesno
O60911CATL2_HUMAN3, ., 4, ., 2, 2, ., 4, 30.43610.93820.9101yesno
P43156CYSP_HEMSP3, ., 4, ., 2, 2, ., -0.56960.94440.85N/Ano
P25803CYSEP_PHAVU3, ., 4, ., 2, 2, ., -0.56050.94750.8480N/Ano
P25250CYSP2_HORVU3, ., 4, ., 2, 2, ., -0.53310.95370.8284N/Ano
P25251CYSP4_BRANA3, ., 4, ., 2, 2, ., -0.50960.92590.9146N/Ano
P25975CATL1_BOVIN3, ., 4, ., 2, 2, ., 1, 50.42230.93510.9071yesno
P12412CYSEP_VIGMU3, ., 4, ., 2, 2, ., -0.56500.94440.8453N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.22.670.824
3rd Layer3.4.220.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.14770001
hypothetical protein (342 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query324
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-122
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 1e-107
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 3e-84
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 5e-67
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 2e-64
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 2e-61
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 7e-41
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 2e-37
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 8e-37
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 5e-32
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 5e-23
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 2e-22
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 7e-19
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 1e-15
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 8e-15
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 5e-07
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  350 bits (900), Expect = e-122
 Identities = 124/220 (56%), Positives = 151/220 (68%), Gaps = 9/220 (4%)

Query: 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSG 165
           +P + DWR+ GAVTP+K+QG CGSCWAFSAV A EG   + TGKL+SLSEQ+LV CDT  
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDT-- 58

Query: 166 VDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANS 225
            ++GC GG  ++AF++I  N GI TE++YPY A DGTC      S  AKIKGY  VP N 
Sbjct: 59  GNNGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYND 118

Query: 226 EEALLKAVA-NQPVAVSIDASGSAFQFYSSGVFTG-DCGTELDHGVTAVGYGATANGTKY 283
           EEAL  A+A N PV+V+IDA    FQ Y SGV+   +C  ELDH V  VGYG T NG  Y
Sbjct: 119 EEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYG-TENGVPY 177

Query: 284 WLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPT 323
           W+VKNSWGT WGE GY R+ R ++     CGIA ++SYP 
Sbjct: 178 WIVKNSWGTDWGENGYFRIARGVNE----CGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 324
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.91
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.74
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.73
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.59
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 98.9
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 97.3
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 97.19
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.54
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 95.51
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 91.74
COG4990195 Uncharacterized protein conserved in bacteria [Fun 86.35
PF09778212 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP 82.66
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.8e-84  Score=575.78  Aligned_cols=298  Identities=41%  Similarity=0.767  Sum_probs=263.4

Q ss_pred             HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEcccCCCCCHHHHHHhhcCccCC-CCCCCC
Q 047793           15 SLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRP-DGLTSR   93 (324)
Q Consensus        15 ~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~-~~~~~~   93 (324)
                      .+.+.|..|+.+|+|.|.+.+|..+|+.||++|+..+++++.....|.+.|+|+|||||+|||++++++.+.. ...+..
T Consensus        66 ~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~~  145 (372)
T KOG1542|consen   66 GLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPGD  145 (372)
T ss_pred             chHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccCccc
Confidence            3478899999999999999999999999999999999999885445899999999999999999999876653 111111


Q ss_pred             CCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCCCC
Q 047793           94 KGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGG  173 (324)
Q Consensus        94 ~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~gG  173 (324)
                       ....+......||++||||++|.||||||||.||||||||+++++|++..|+++++++||||+|+||+..  +.||+||
T Consensus       146 -~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~--d~gC~GG  222 (372)
T KOG1542|consen  146 -AAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSC--DNGCNGG  222 (372)
T ss_pred             -cccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCc--CCcCCCC
Confidence             1111123345899999999999999999999999999999999999999999999999999999999874  8999999


Q ss_pred             chHHHHHHHHHhCCcCCCCcccccCCCC-cccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCcccc
Q 047793          174 EMEDAFKFIIHNDGITTEANYPYQAVDG-TCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAFQF  251 (324)
Q Consensus       174 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~  251 (324)
                      .+..|++|+++..|+..|++|||++..+ .|... .....+.|++|..++ .++++|.+.|. +|||+|+|++.  .+++
T Consensus       223 l~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~-~~~~~v~I~~f~~l~-~nE~~ia~wLv~~GPi~vgiNa~--~mQ~  298 (372)
T KOG1542|consen  223 LMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFD-KSKIVVSIKDFSMLS-NNEDQIAAWLVTFGPLSVGINAK--PMQF  298 (372)
T ss_pred             ChhHHHHHHHHhCCccccccCCccccCCCccccc-hhhceEEEeccEecC-CCHHHHHHHHHhcCCeEEEEchH--HHHH
Confidence            9999999988888999999999999888 99988 467889999999998 68999999888 89999999976  6999


Q ss_pred             ccCCeeeCC---CCCC-CCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 047793          252 YSSGVFTGD---CGTE-LDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPT  323 (324)
Q Consensus       252 y~~Giy~~~---~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~  323 (324)
                      |.+||+.+.   |+.. ++|||+|||||.....++|||||||||++|||+||+|+.||.    |.|||+++++-++
T Consensus       299 YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~----N~CGi~~mvss~~  370 (372)
T KOG1542|consen  299 YRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGS----NACGIADMVSSAA  370 (372)
T ss_pred             hcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccc----cccccccchhhhh
Confidence            999999982   8865 999999999999844799999999999999999999999997    4699999987654

>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query324
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 7e-85
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 2e-78
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 1e-71
1pci_A322 Procaricain Length = 322 1e-70
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 2e-69
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 4e-69
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 1e-68
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 6e-68
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 3e-66
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 6e-66
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 7e-66
2act_A220 Crystallographic Refinement Of The Structure Of Act 1e-63
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 7e-63
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 1e-62
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 2e-62
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 2e-62
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 6e-62
3hwn_A258 Cathepsin L With Az13010160 Length = 258 7e-60
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 1e-59
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 3e-58
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 3e-58
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 4e-58
1ppo_A216 Determination Of The Structure Of Papaya Protease O 2e-57
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 7e-57
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 6e-56
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 1e-54
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 1e-54
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 2e-54
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 4e-54
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 9e-54
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 2e-53
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 3e-53
3of8_A221 Structural Basis For Reversible And Irreversible In 3e-53
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 4e-53
3h89_A220 A Combined Crystallographic And Molecular Dynamics 4e-53
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 7e-53
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 2e-52
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 2e-52
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 4e-52
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 4e-52
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 4e-52
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 5e-52
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 6e-52
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 8e-52
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 1e-51
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 1e-51
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 1e-51
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 2e-51
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 2e-51
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 2e-51
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 2e-51
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 2e-51
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 3e-51
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 3e-51
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 3e-51
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 8e-51
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 1e-50
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 1e-50
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 2e-50
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 2e-50
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 2e-50
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 3e-50
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 3e-50
2vhs_A217 Cathsilicatein, A Chimera Length = 217 2e-49
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 1e-43
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 4e-43
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 4e-42
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 4e-41
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 9e-41
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 2e-40
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 2e-40
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 1e-39
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 2e-39
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 2e-38
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 3e-38
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 3e-35
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 4e-31
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 6e-29
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 9e-28
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 1e-27
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 1e-27
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 1e-26
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 2e-26
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 8e-25
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 9e-19
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 3e-18
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 6e-18
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 7e-18
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 1e-17
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 3e-17
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 1e-16
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 1e-16
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 2e-16
1mir_A322 Rat Procathepsin B Length = 322 3e-16
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 1e-15
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 3e-13
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 3e-13
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 3e-13
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 1e-12
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 7e-12
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 3e-11
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 2e-09
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 3e-09
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 4e-09
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 7e-09
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 9e-09
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 2e-07
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 7e-07
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  310 bits (794), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 147/217 (67%), Positives = 169/217 (77%), Gaps = 1/217 (0%)
Query: 106 VPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSG 165
           VPA++DWRK GAVT +K+QG CGSCWAFS + A EGI Q+ T KL+SLSEQELV CDT  
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD- 60
Query: 166 VDHGCEGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANS 225
            + GC GG M+ AF+FI    GITTEANYPY+A DGTC+ + E +    I G+E VP N 
Sbjct: 61  QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPEND 120
Query: 226 EEALLKAVANQPVAVSIDASGSAFQFYSSGVFTGDCGTELDHGVTAVGYGATANGTKYWL 285
           E ALLKAVANQPV+V+IDA GS FQFYS GVFTG CGTELDHGV  VGYG T +GTKYW 
Sbjct: 121 ENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWT 180
Query: 286 VKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYP 322
           VKNSWG  WGE+GYIRM+R I  KEGLCGIAM++SYP
Sbjct: 181 VKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYP 217
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query324
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 0.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 0.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 0.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 0.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-180
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-177
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-172
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-170
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-153
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-153
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-151
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-151
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-150
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-150
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-150
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-149
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-148
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-148
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-148
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-141
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-141
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-140
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-139
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-138
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-138
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-136
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-136
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-134
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-131
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-128
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-122
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 1e-115
3u8e_A222 Papain-like cysteine protease; papain-like cystein 1e-109
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 1e-105
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 1e-100
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 8e-93
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 3e-88
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 5e-80
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 2e-78
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 5e-34
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 3e-23
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 5e-12
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 6e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 7e-04
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  535 bits (1380), Expect = 0.0
 Identities = 141/311 (45%), Positives = 187/311 (60%), Gaps = 5/311 (1%)

Query: 13  EASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQ 72
              L +    WM  + K Y+N +EK  RF IFKDN+ +I+  N   N  Y L +NEFAD 
Sbjct: 15  TERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNK-KNNSYWLGLNEFADL 73

Query: 73  TNQEFKAFRNGYRRPDGLTSRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWA 132
           +N EF     G      +       F  E+++++P  +DWRK GAVTP+++QG CGSCWA
Sbjct: 74  SNDEFNEKYVGSLIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWA 133

Query: 133 FSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGITTEA 192
           FSAVA  EGI ++ TGKL+ LSEQELV C+     HGC+GG    A +++  N GI   +
Sbjct: 134 FSAVATVEGINKIRTGKLVELSEQELVDCERR--SHGCKGGYPPYALEYVAKN-GIHLRS 190

Query: 193 NYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQFY 252
            YPY+A  GTC        + K  G   V  N+E  LL A+A QPV+V +++ G  FQ Y
Sbjct: 191 KYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLY 250

Query: 253 SSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGL 312
             G+F G CGT++D  VTAVGYG  + G  Y L+KNSWGT+WGE+GYIR+KR      G+
Sbjct: 251 KGGIFEGPCGTKVDGAVTAVGYG-KSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGV 309

Query: 313 CGIAMDSSYPT 323
           CG+   S YPT
Sbjct: 310 CGLYKSSYYPT 320
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Length = 457 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query324
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.79
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.75
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 96.61
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 96.48
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 96.44
3erv_A236 Putative C39-like peptidase; structural genomics, 89.34
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=2.1e-87  Score=624.76  Aligned_cols=302  Identities=44%  Similarity=0.807  Sum_probs=267.4

Q ss_pred             hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEcccCCCCCHHHHHHhhcCccCCCCCCC
Q 047793           13 EASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAAGNKPYKLSINEFADQTNQEFKAFRNGYRRPDGLTS   92 (324)
Q Consensus        13 ~~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~   92 (324)
                      ++.+.++|++||++|+|.|.+.+|+.+|+.||++|++.|++||++ +.+|++|+|+|+|||.+||++++++.........
T Consensus        59 ~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~~  137 (363)
T 3tnx_A           59 TERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTT  137 (363)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCSSCSCCCCS
T ss_pred             HHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccccccccccc
Confidence            568889999999999999999999999999999999999999984 6799999999999999999999887654332111


Q ss_pred             C-CCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCCC
Q 047793           93 R-KGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCE  171 (324)
Q Consensus        93 ~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc~  171 (324)
                      . ...........+||++||||++|.||||||||.||||||||++++||++++++++..+.||+|+|+||...  +.||+
T Consensus       138 ~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~--~~GC~  215 (363)
T 3tnx_A          138 ELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR--SYGCN  215 (363)
T ss_dssp             SSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTB
T ss_pred             ccccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC--CCCCC
Confidence            1 11111122234799999999999999999999999999999999999999999999999999999999875  68999


Q ss_pred             CCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHHcCCeEEEEeccCCcccc
Q 047793          172 GGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQPVAVSIDASGSAFQF  251 (324)
Q Consensus       172 gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~  251 (324)
                      ||.+..|+.|+.+. |+++|++|||.+.++.|..........++.++..++..++..++.+|++|||+|++++...+|++
T Consensus       216 GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F~~  294 (363)
T 3tnx_A          216 GGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQL  294 (363)
T ss_dssp             CCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSHHHHT
T ss_pred             CCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecchhhhC
Confidence            99999999999755 99999999999988877765444556677888888888899999999999999999987788999


Q ss_pred             ccCCeeeCCCCCCCCeEEEEeeecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 047793          252 YSSGVFTGDCGTELDHGVTAVGYGATANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPT  323 (324)
Q Consensus       252 y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~  323 (324)
                      |++|||..+|+...+|||+|||||+     +|||||||||++|||+|||||+|+.++..|+|||++.++||+
T Consensus       295 Y~sGVy~~~~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi  361 (363)
T 3tnx_A          295 YRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV  361 (363)
T ss_dssp             EEEEEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE
T ss_pred             CCCCEECCCCCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc
Confidence            9999999999888999999999985     499999999999999999999999988789999999999998
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 324
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 3e-81
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 1e-72
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 4e-71
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 2e-67
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 3e-67
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 3e-66
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 7e-66
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 1e-65
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 2e-65
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 6e-64
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 9e-64
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 1e-62
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 1e-61
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 1e-61
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 3e-60
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 4e-59
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 6e-54
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 3e-53
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 4e-52
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 3e-47
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 5e-08
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 3e-05
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  247 bits (630), Expect = 3e-81
 Identities = 127/320 (39%), Positives = 184/320 (57%), Gaps = 18/320 (5%)

Query: 13  EASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNA---AGNKPYKLSINEF 69
           + SL  +  +W + + ++Y   EE   R  +++ N++ IE  N     G   + +++N F
Sbjct: 5   DHSLEAQWTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAF 63

Query: 70  ADQTNQEFKAFRNGYRRPDGLTSRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGS 129
            D T++EF+   NG++       RKG  F+     + P ++DWR+ G VTP+KNQG CGS
Sbjct: 64  GDMTSEEFRQVMNGFQNR---KPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGS 120

Query: 130 CWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGCEGGEMEDAFKFIIHNDGIT 189
           CWAFSA  A EG     TG+LISLSEQ LV C     + GC GG M+ AF+++  N G+ 
Sbjct: 121 CWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLD 180

Query: 190 TEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVANQ-PVAVSIDASGSA 248
           +E +YPY+A + +C    + S               E+AL+KAVA   P++V+IDA   +
Sbjct: 181 SEESYPYEATEESCKYNPKYSVA--NDAGFVDIPKQEKALMKAVATVGPISVAIDAGHES 238

Query: 249 FQFYSSGVF-TGDCGTE-LDHGVTAVGYGA---TANGTKYWLVKNSWGTSWGEEGYIRMK 303
           F FY  G++   DC +E +DHGV  VGYG     ++  KYWLVKNSWG  WG  GY++M 
Sbjct: 239 FLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMA 298

Query: 304 RDIDAKEGLCGIAMDSSYPT 323
           +D   +   CGIA  +SYPT
Sbjct: 299 KD---RRNHCGIASAASYPT 315
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query324
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.77
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.68
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 95.95
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 95.23
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-81  Score=574.94  Aligned_cols=302  Identities=42%  Similarity=0.827  Sum_probs=259.8

Q ss_pred             hHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC---CCCCeEEEcccCCCCCHHHHHHhhcCccCCCCC
Q 047793           14 ASLSEKHEQWMSKYGKVYKNPEEKEKRFRIFKDNVEFIESLNAA---GNKPYKLSINEFADQTNQEFKAFRNGYRRPDGL   90 (324)
Q Consensus        14 ~~~~~~f~~~~~~~~k~Y~~~~e~~~r~~~f~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~   90 (324)
                      ..++.+|++||++|+|.|++. |+.+|++||.+|++.|++||++   ++.+|++|+|+|+|||++||.++++....+...
T Consensus         6 ~~l~~~F~~f~~~~~K~Y~~~-ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~~   84 (316)
T d1cs8a_           6 HSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR   84 (316)
T ss_dssp             GGGHHHHHHHHHHTTCCCCTT-HHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS
T ss_pred             HHHHHHHHHHHHHhCCcCCCH-HHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhccccccccc
Confidence            467789999999999999875 7789999999999999999985   567999999999999999999998765543321


Q ss_pred             CCCCCCcccccCCCCCCceeecccCCCCCcccCCCCCcchHHHHHHHHHhHHHHhhcCCCccCCHHHHhhhcCCCCCCCC
Q 047793           91 TSRKGTSFKYENVIDVPATMDWRKNGAVTPIKNQGPCGSCWAFSAVAATEGITQLTTGKLISLSEQELVSCDTSGVDHGC  170 (324)
Q Consensus        91 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~~~gc  170 (324)
                         ...........+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+...++.+|
T Consensus        85 ---~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~~~c  161 (316)
T d1cs8a_          85 ---KGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGC  161 (316)
T ss_dssp             ---CCEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGG
T ss_pred             ---cCccccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccCCCC
Confidence               11112223345899999999999999999999999999999999999999999999999999999999876668899


Q ss_pred             CCCchHHHHHHHHHhCCcCCCCcccccCCCCcccCCCCCCceEEEeeeEEcCCCcHHHHHHHHH-cCCeEEEEeccCCcc
Q 047793          171 EGGEMEDAFKFIIHNDGITTEANYPYQAVDGTCNKTNEASHVAKIKGYETVPANSEEALLKAVA-NQPVAVSIDASGSAF  249 (324)
Q Consensus       171 ~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~~~~~~~~f  249 (324)
                      .||.+..|+.|+..+.++.+|.++||......|... .......+..+.... .+.+.|+++|. +|||+|++++....|
T Consensus       162 ~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv~v~i~~~~~~f  239 (316)
T d1cs8a_         162 NGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDAGFVDIP-KQEKALMKAVATVGPISVAIDAGHESF  239 (316)
T ss_dssp             GCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECC-SCHHHHHHHHHHHCCEEEEECCCSHHH
T ss_pred             CCCchHHHHHHHHhcCcccccccccccccccccccc-ccccccccccccccc-CcHHHHHHHHHHhCCeEEEEEeccchh
Confidence            999999999999988668899999999888888765 334445555666555 67888888888 799999999987789


Q ss_pred             ccccCCeeeCC-CC-CCCCeEEEEeeeccc---CCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceeeC
Q 047793          250 QFYSSGVFTGD-CG-TELDHGVTAVGYGAT---ANGTKYWLVKNSWGTSWGEEGYIRMKRDIDAKEGLCGIAMDSSYPTA  324 (324)
Q Consensus       250 ~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~---~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~  324 (324)
                      .+|++|||..+ |+ ..++|||+|||||.+   .++.+|||||||||++|||+|||||+|+..   |+|||++.++||+|
T Consensus       240 ~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~---n~CGI~~~~~yP~v  316 (316)
T d1cs8a_         240 LFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV  316 (316)
T ss_dssp             HTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEECC
T ss_pred             ccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCC---CcCccCCeeeeeeC
Confidence            99999999887 66 468999999999964   368899999999999999999999999864   46999999999996
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure