Citrus Sinensis ID: 047826

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740------
SITACINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNLKRPVTHTDSSSADSLSNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGDVDWETILDSEVLRGVKNSEYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVMQQQRKN
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHcccccccccEEEEEEEccccccccccEEEccccccccccccccHHHHHHHHHHcccccccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccEEEEEEccccccHHHHHHHHHHHHcccEEEEEEEEEEccccccccHHHHHHHHHHHHccccccEEEEEEEEcccHHHHHHHHHccccccEEEEccccccccccccccccccccccccHHHHHHHcccccccccEEEEEEcccc
cccEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHcHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEEEEHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHEEEHHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHEHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccccccccccccccccccEEEEEEEccccccHHHHHHHHHccccccccEEEEEEEEEHccccccHEEEEccccccccccccHHHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHccEEEEEEEccccccccccEccccHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEccccccccHHcccHcHHHcccccccHHHcccccccccEEEEEEEEEccc
sitacinlppevnsaglltqfeggvkdykwldyttpRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLvalipgsmvpsgggptglfitplyymtaYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSqvayssppkAIQLCVYILTFIVIVMVVVRPAMLLIARmtpegkevsrtgfeFTVLGLYILGlavphgpplgsALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTfasdgryvspnMFRFMLGVVIVTGSVVPILVRKlydpsrkyaGYQIKklvdckpeselqivscIHVPSNIISAINLlsissptnespmVVNVLHLIKLNGQATSIFVSHqsknkniytycyseNVILSFkkfgglhwgaasinaftaisppdlmhdDICTLALDKLASLvilpfhrtwyidgslesedqTVRNLNlcvlekapcsvgilidhgnlkrpvthtdsssadslSNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAesddgdvdwetildsevlrgvknseYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRrynlespqtsclkqwsefpelgilgdllaskdlggkCSVLVMQQQRKN
sitacinlppevnsagllTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARmtpegkevsRTGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNLKRPVTHTDSSSADSLSNVAMLFIGGNDDREALTFAKRmvrdnkvrLTVVHFiaesddgdvdweTILDsevlrgvknseyIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVMQQQRKN
SITACINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPsniisainllsissPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNLKRPVTHTDSSSADSLSNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGDVDWETILDSEVLRGVKNSEYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVMQQQRKN
***ACINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNLKR*************SNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGDVDWETILDSEVLRGVKNSEYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLV*******
*ITACINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYA*******************SCIHVPSNIISAINLL*******ESPMVVNVLHLIKLNGQATS*********************ILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFH**************TVRNLNLCVLEKAPCSVGILIDHGNL***************SNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAESD***********SEVLRGVKNSEYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGR*****************FPELGILGDLLASKDLGGKCSVL*MQQQ***
SITACINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNLKR**********DSLSNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGDVDWETILDSEVLRGVKNSEYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVMQQQRKN
*ITACINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNL***********ADSLSNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGDVDWETILDSEVLRGVKNSEYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVMQQQRK*
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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SITACINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNLKRPVTHTDSSSADSLSNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGDVDWETILDSEVLRGVKNSEYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVMQQQRKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query746 2.2.26 [Sep-21-2011]
Q9FYC1817 Cation/H(+) antiporter 4 yes no 0.983 0.898 0.367 1e-131
Q9FFB8822 Cation/H(+) antiporter 3 no no 0.989 0.897 0.354 1e-125
Q58P71816 Cation/H(+) antiporter 8 no no 0.971 0.888 0.344 1e-111
Q3EDG3815 Cation/H(+) antiporter 5 no no 0.967 0.885 0.332 1e-109
Q58P69783 Cation/H(+) antiporter 10 no no 0.904 0.862 0.344 1e-108
Q9SIT5821 Cation/H(+) antiporter 15 no no 0.935 0.850 0.332 1e-107
Q9FYC0770 Cation/H(+) antiporter 12 no no 0.916 0.888 0.320 1e-107
Q9FFB7800 Cation/H(+) antiporter 9 no no 0.924 0.862 0.328 1e-107
P0CG16796 Cation/H(+) antiporter 6B no no 0.951 0.891 0.335 1e-105
Q8GX92818 Cation/H(+) antiporter 6A no no 0.967 0.882 0.313 1e-104
>sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 Back     alignment and function desciption
 Score =  469 bits (1206), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 294/801 (36%), Positives = 455/801 (56%), Gaps = 67/801 (8%)

Query: 5   CINLPPEVNSAGLLT--QFEGGVKDYKWLDYTTP--RIMFLIATMLIISQAFHSVLKRFG 60
           C  LP   +S+GL    +      + ++ +Y  P  +I+FLI T  I+ Q FH  L+R G
Sbjct: 22  CGILPINPSSSGLWPSPKLPDPQANIEFWNYMFPHVQIIFLIVT--ILWQFFHFFLRRLG 79

Query: 61  IPIFISQIFAGLLLSRPVLQVIKVADKIITPEHVQ--LIGSMGNIGIAFFIFQSGVKMDI 118
           +  F S +  G+LLS+  L+    A K ++ E  +  L G +G      F F  GVKMD+
Sbjct: 80  MIRFTSHMLTGILLSKSFLKENTPARKFLSTEDYKETLFGLVGACSYMMFWFLMGVKMDL 139

Query: 119 SMVAKVGRKAWYIGILSVIAPLV--ALIPGSMVPSGGGPTG---------LFITPLYYMT 167
           S++   GRKA  IG+ SV+  +   ALI   ++   G   G         +FI  +  ++
Sbjct: 140 SLIRSTGRKAVAIGLSSVLLSITVCALIFFLILRDVGTKKGEPVMSFFEIIFIYLIQCLS 199

Query: 168 AYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSY---ATILFLT-------------LS 211
           ++PVI  LL  L++ NSELGRLA SSA+++DF +    A ++FL              + 
Sbjct: 200 SFPVIGNLLFELRLQNSELGRLAMSSAVISDFSTSILSAVLVFLKELKDDKSRLGSVFIG 259

Query: 212 QVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGF---------- 261
            V   + P  ++    ++ F+   + + RP M  I + TP G+ V +             
Sbjct: 260 DVIVGNRP--MKRAGTVVLFVCFAIYIFRPLMFFIIKRTPSGRPVKKFYIYAIIILVFGS 317

Query: 262 --------EFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLS 313
                   +   +G +ILGLAVPHGPPLGSA++ KF++++ G FLP FV TSA  +    
Sbjct: 318 AILADWCKQSIFIGPFILGLAVPHGPPLGSAILQKFESVVFGTFLPFFVATSAEEIDTSI 377

Query: 314 LHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTF 373
           L ++  L    + L  ++ +VKF    L    + M   D +AL+LIM+ KGI E   Y +
Sbjct: 378 LQSWIDLK-SIVILVSVSFIVKFALTTLPAFLYGMPAKDCIALSLIMSFKGIFEFGAYGY 436

Query: 374 ASDGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIV 433
           A     + P  F  +   +++  +V+P L++++YDPSR YAGY+ + ++  KP SEL+I+
Sbjct: 437 AYQRGTIRPVTFTVLSLYILLNSAVIPPLLKRIYDPSRMYAGYEKRNMLHMKPNSELRIL 496

Query: 434 SCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCY 493
           SCI+   +I   INLL  + P+ E+P+   VLHL++L GQA  + +SH+ + +      Y
Sbjct: 497 SCIYKTDDIRPMINLLEATCPSRENPVATYVLHLMELVGQANPVLISHRLQTRKSENMSY 556

Query: 494 -SENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYI 552
            SENV++SF++F    +G+  ++ +TA+S P +MH DIC LAL+   SL+ILPFH+TW  
Sbjct: 557 NSENVVVSFEQFHNDFFGSVFVSTYTALSVPKMMHGDICMLALNNTTSLIILPFHQTWSA 616

Query: 553 DGS-LESEDQTVRNLNLCVLEKAPCSVGILI-DHGNLKRPVTHTDSSSADSLSNVAMLFI 610
           DGS + S+   +R LN  VL+ +PCSVGI +    N +R +  T ++ +     V MLF+
Sbjct: 617 DGSAIVSDSLMIRQLNKSVLDLSPCSVGIFVYRSSNGRRTIKETAANFSS--YQVCMLFL 674

Query: 611 GGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGD--VDWETILDSEVLRGVKNS---- 664
           GG DDREAL+ AKRM RD+++ +TVV  I+     +   DW+ +LD E+LR VK++    
Sbjct: 675 GGKDDREALSLAKRMARDSRITITVVSLISSEQRANQATDWDRMLDLELLRDVKSNVLAG 734

Query: 665 EYIRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGD 724
             I + + VV D  +T +++ SI +E++L IVGR    +S  T  L++WSEF ELGI+GD
Sbjct: 735 ADIVFSEEVVNDANQTSQLLKSIANEYDLFIVGREKGRKSVFTEGLEEWSEFEELGIIGD 794

Query: 725 LLASKDLGGKCSVLVMQQQRK 745
           LL S+DL  + SVLV+QQQ++
Sbjct: 795 LLTSQDLNCQASVLVIQQQQQ 815
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 Back     alignment and function description
>sp|Q58P71|CHX8_ARATH Cation/H(+) antiporter 8 OS=Arabidopsis thaliana GN=CHX8 PE=2 SV=1 Back     alignment and function description
>sp|Q3EDG3|CHX5_ARATH Cation/H(+) antiporter 5 OS=Arabidopsis thaliana GN=CHX5 PE=2 SV=1 Back     alignment and function description
>sp|Q58P69|CHX10_ARATH Cation/H(+) antiporter 10 OS=Arabidopsis thaliana GN=CHX10 PE=2 SV=2 Back     alignment and function description
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYC0|CHX12_ARATH Cation/H(+) antiporter 12 OS=Arabidopsis thaliana GN=CHX12 PE=2 SV=2 Back     alignment and function description
>sp|Q9FFB7|CHX9_ARATH Cation/H(+) antiporter 9 OS=Arabidopsis thaliana GN=CHX9 PE=2 SV=1 Back     alignment and function description
>sp|P0CG16|CHX6B_ARATH Cation/H(+) antiporter 6B OS=Arabidopsis thaliana GN=CHX6b PE=2 SV=1 Back     alignment and function description
>sp|Q8GX92|CHX6A_ARATH Cation/H(+) antiporter 6A OS=Arabidopsis thaliana GN=CHX6a PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query746
255564875776 monovalent cation:proton antiporter, put 0.973 0.935 0.442 1e-171
225434429764 PREDICTED: cation/H(+) antiporter 3-like 0.970 0.947 0.436 1e-167
224142305782 cation proton exchanger [Populus trichoc 0.973 0.928 0.391 1e-146
356529113777 PREDICTED: cation/H(+) antiporter 3-like 0.973 0.934 0.397 1e-144
255565469790 monovalent cation:proton antiporter, put 0.977 0.922 0.404 1e-142
224091881701 cation proton exchanger [Populus trichoc 0.859 0.914 0.414 1e-142
224143840783 cation proton exchanger [Populus trichoc 0.966 0.920 0.409 1e-142
449463487795 PREDICTED: cation/H(+) antiporter 3-like 0.979 0.919 0.386 1e-138
297745811 1497 unnamed protein product [Vitis vinifera] 0.892 0.444 0.394 1e-137
357505039821 K(+)/H(+) antiporter [Medicago truncatul 0.962 0.874 0.389 1e-137
>gi|255564875|ref|XP_002523431.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223537321|gb|EEF38951.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  610 bits (1573), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 340/768 (44%), Positives = 479/768 (62%), Gaps = 42/768 (5%)

Query: 5   CINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIF 64
           C  LPP +NS G+   +E        L Y+ P +   I  +  I+QA H VLK FG PI 
Sbjct: 11  CTKLPPNINSNGI---WENINSPNSVLTYSLPLLQLQIIMIFFITQACHFVLKHFGFPII 67

Query: 65  ISQIFAGLLLSRPVL-QVIKVADKIITPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAK 123
           ISQ+ AG++L   +L    +  D + T +   ++G++  +G   F+F  GVKMD+SM+ K
Sbjct: 68  ISQLIAGVILGPSLLGSSTEFKDMLFTIDSQDILGTVATLGYTLFMFVCGVKMDVSMIFK 127

Query: 124 VGRKAWYIGILSVIAPLV------ALIPGSMVPSGGGPTGLF-ITPLYYMTAYPVIFCLL 176
            G KA  IG LS+ APLV       L+  S + +   P+ L+ IT +   T +PVI  LL
Sbjct: 128 TGGKATAIGFLSLAAPLVFGLTVEVLLERSWL-AEDLPSNLYVITSVLSATPFPVISTLL 186

Query: 177 THLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAY-SSPPKAIQLCVYILTFIVIV 235
           + LKILNSELGRL  S+A++ +  +       TL  V   SS   A +  + I+ FI   
Sbjct: 187 SDLKILNSELGRLGLSAAMIGEIGTVGLFTLATLITVGKESSVQMAFRSLICIIGFIAFS 246

Query: 236 MVVVRPAMLLIARMTPEGKEV------------------SRTGFEFTVLGLYILGLAVPH 277
           +  +RPAM  I + TP+G+ V                  S +  +    G +ILGLA+P 
Sbjct: 247 IFAIRPAMFWIIKQTPKGRPVKDMYIHVIIFMVFGTAILSNSYGQSIFFGPFILGLAIPD 306

Query: 278 GPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFG 337
           GPPLGSA+V+K D M+SG F+P+FVTTS MR    +L    +LI   I L  +    K G
Sbjct: 307 GPPLGSAIVHKLDCMVSGIFVPLFVTTSTMRAEFGTLRLNKNLITAEIILIIVTLTAKLG 366

Query: 338 ACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGVVIVTGS 397
           AC +  LY +M  ND++ALAL+M+ KGIVE+A Y+F  D + VS   F  ++  V+VT +
Sbjct: 367 ACLIASLYCQMPLNDSLALALVMSCKGIVELATYSFLRDNKIVSSETFTLLIVSVLVTAT 426

Query: 398 VVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPTNE 457
           +VP+LV+KLYDP RKYAGYQ + +++ +  SEL+I+ CIH P +I +AIN+L  S P  E
Sbjct: 427 IVPMLVKKLYDPCRKYAGYQKRNILNLRYNSELRILVCIHSPDDITAAINVLDASCPNPE 486

Query: 458 SPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKKFGGLHWGAASINAF 517
            P+ V+VLHL+KL G+A+ IF+SH  + K++  + YS+NVI SF ++   + GA SI+ F
Sbjct: 487 KPLSVSVLHLMKLIGRASPIFISHNIQIKSVSKHSYSDNVITSFNQYQQKNIGAVSISTF 546

Query: 518 TAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCS 577
           TAISPP LMH+DICTLALDKLASL+ILPFH  W   GS+ SED T+R LN  +LE+APCS
Sbjct: 547 TAISPPKLMHEDICTLALDKLASLIILPFHINWSSAGSIVSEDTTIRALNHNILERAPCS 606

Query: 578 VGILIDHGNLKRPVTHTDSSSADSLSNVAMLFIGGNDDREALTFAKRM-VRDNKVRLTVV 636
           +GIL++ G+L+R      + +  S   VAM+F+GGNDDREALTFAKRM +  + + + V+
Sbjct: 607 IGILVNRGHLRR------TKAEQSPKRVAMIFLGGNDDREALTFAKRMAIGSSAITIMVI 660

Query: 637 HFIAESDDGDVDWETILDSEVLRGVKN----SEYIRYVKHVVKDGAETVKIVHSIVSEFE 692
           + +A        WE +LDSE L+ VK+    S Y+ + + VVKDG +T  I+  +  +++
Sbjct: 661 NLVANDQKDITTWEQMLDSETLKDVKHNTGGSRYVTFKEVVVKDGTQTACILRGMACQYD 720

Query: 693 LIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVM 740
           LIIVGRR  +  P+T+ L +WSEFPELG++GDLLAS D+  K S+LVM
Sbjct: 721 LIIVGRRNGINCPRTTGLAEWSEFPELGVVGDLLASSDVNCKASILVM 768

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434429|ref|XP_002277574.1| PREDICTED: cation/H(+) antiporter 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224142305|ref|XP_002324499.1| cation proton exchanger [Populus trichocarpa] gi|222865933|gb|EEF03064.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356529113|ref|XP_003533141.1| PREDICTED: cation/H(+) antiporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|255565469|ref|XP_002523725.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223537029|gb|EEF38665.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224091881|ref|XP_002309384.1| cation proton exchanger [Populus trichocarpa] gi|222855360|gb|EEE92907.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224143840|ref|XP_002325093.1| cation proton exchanger [Populus trichocarpa] gi|222866527|gb|EEF03658.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449463487|ref|XP_004149465.1| PREDICTED: cation/H(+) antiporter 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297745811|emb|CBI15867.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357505039|ref|XP_003622808.1| K(+)/H(+) antiporter [Medicago truncatula] gi|355497823|gb|AES79026.1| K(+)/H(+) antiporter [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query746
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.639 0.583 0.411 1.1e-120
TAIR|locus:2172631822 CHX3 "cation/H+ exchanger 3" [ 0.639 0.580 0.407 2e-115
TAIR|locus:2172646800 CHX9 "cation/H+ exchanger 9" [ 0.636 0.593 0.358 9.2e-107
TAIR|locus:2082102783 CHX10 "cation/H+ exchanger 10" 0.639 0.609 0.382 1.2e-106
TAIR|locus:2205165815 ATCHX5 [Arabidopsis thaliana ( 0.636 0.582 0.356 1.9e-106
TAIR|locus:2205150818 CHX6A "cation/H+ exchanger 6A" 0.636 0.580 0.35 3.6e-103
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.650 0.590 0.325 2.4e-87
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.655 0.588 0.315 7.3e-84
TAIR|locus:2031968867 CHX23 "cation/H+ exchanger 23" 0.635 0.546 0.304 8.5e-77
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.772 0.694 0.320 4.6e-73
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 945 (337.7 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
 Identities = 201/489 (41%), Positives = 304/489 (62%)

Query:   266 LGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNI 325
             +G +ILGLAVPHGPPLGSA++ KF++++ G FLP FV TSA  +    L ++  L    +
Sbjct:   330 IGPFILGLAVPHGPPLGSAILQKFESVVFGTFLPFFVATSAEEIDTSILQSWIDLK-SIV 388

Query:   326 ALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMF 385
              L  ++ +VKF    L    + M   D +AL+LIM+ KGI E   Y +A     + P  F
Sbjct:   389 ILVSVSFIVKFALTTLPAFLYGMPAKDCIALSLIMSFKGIFEFGAYGYAYQRGTIRPVTF 448

Query:   386 RFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPXXXXXX 445
               +   +++  +V+P L++++YDPSR YAGY+ + ++  KP SEL+I+SCI+        
Sbjct:   449 TVLSLYILLNSAVIPPLLKRIYDPSRMYAGYEKRNMLHMKPNSELRILSCIYKTDDIRPM 508

Query:   446 XXXXXXXXPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCY-SENVILSFKKF 504
                     P+ E+P+   VLHL++L GQA  + +SH+ + +      Y SENV++SF++F
Sbjct:   509 INLLEATCPSRENPVATYVLHLMELVGQANPVLISHRLQTRKSENMSYNSENVVVSFEQF 568

Query:   505 GGLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGS-LESEDQTV 563
                 +G+  ++ +TA+S P +MH DIC LAL+   SL+ILPFH+TW  DGS + S+   +
Sbjct:   569 HNDFFGSVFVSTYTALSVPKMMHGDICMLALNNTTSLIILPFHQTWSADGSAIVSDSLMI 628

Query:   564 RNLNLCVLEKAPCSVGILIDHG-NLKRPVTHTDSSSADSLSNVAMLFIGGNDDREALTFA 622
             R LN  VL+ +PCSVGI +    N +R +  T ++   S   V MLF+GG DDREAL+ A
Sbjct:   629 RQLNKSVLDLSPCSVGIFVYRSSNGRRTIKETAANF--SSYQVCMLFLGGKDDREALSLA 686

Query:   623 KRMVRDNKVRLTVVHFIAESDDGD--VDWETILDSEVLRGVKNSEY----IRYVKHVVKD 676
             KRM RD+++ +TVV  I+     +   DW+ +LD E+LR VK++      I + + VV D
Sbjct:   687 KRMARDSRITITVVSLISSEQRANQATDWDRMLDLELLRDVKSNVLAGADIVFSEEVVND 746

Query:   677 GAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCS 736
               +T +++ SI +E++L IVGR    +S  T  L++WSEF ELGI+GDLL S+DL  + S
Sbjct:   747 ANQTSQLLKSIANEYDLFIVGREKGRKSVFTEGLEEWSEFEELGIIGDLLTSQDLNCQAS 806

Query:   737 VLVMQQQRK 745
             VLV+QQQ++
Sbjct:   807 VLVIQQQQQ 815
GO:0006812 "cation transport" evidence=IEA;IC
GO:0008152 "metabolic process" evidence=IEA
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006814 "sodium ion transport" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172646 CHX9 "cation/H+ exchanger 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082102 CHX10 "cation/H+ exchanger 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205165 ATCHX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205150 CHX6A "cation/H+ exchanger 6A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031968 CHX23 "cation/H+ exchanger 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FYC1CHX4_ARATHNo assigned EC number0.36700.98390.8984yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00023997001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (1525 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query746
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-129
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 3e-25
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 3e-22
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 1e-07
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  404 bits (1040), Expect = e-129
 Identities = 253/774 (32%), Positives = 396/774 (51%), Gaps = 78/774 (10%)

Query: 31  LDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVL-QVIKVADKII 89
           LD++ P  +  +  +++ ++    +LK F  P  IS+I  G++L   VL Q    A+ I 
Sbjct: 37  LDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFANTIF 96

Query: 90  TPEHVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMV 149
               V ++ +M N+G+ +F+F  GV+MDIS++ + G+KA  I I  +  P    +  S +
Sbjct: 97  PLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFI 156

Query: 150 ------PSGGGPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYA 203
                     G   LF+     +TA+PV+  +L  +K++N+ELGR+A S+A+V D  ++ 
Sbjct: 157 FHQVSRNVHQGTFILFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWI 216

Query: 204 TI-LFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIARMTPEGKEVSR---- 258
            + L + L++   S+   ++ + +  + F++    VVRP +  I R TPEG+  S     
Sbjct: 217 LLALAIALAEND-STSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRRTPEGETFSEFYIC 275

Query: 259 --------TGF------EFTVLGLYILGLAVPHGPPLGSALVNKFDTMISGFFLPIFVTT 304
                   +GF        +V G ++ GL +P+GP LG  L+ K +  +SG  LP+F   
Sbjct: 276 LILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGP-LGVTLIEKLEDFVSGLLLPLFFAI 334

Query: 305 SAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACA-------LLLLYWKMHRNDAMALA 357
           S ++         N       A  GL  LV   A A       ++  ++ M   + + L 
Sbjct: 335 SGLKT--------NVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLG 386

Query: 358 LIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGV-VIVTGSVVPILVRKLYDPSRKYAGY 416
            +MN KG+VEM       D   +    F  M+ V V +T  + P+ V  +Y P+R+  GY
Sbjct: 387 FLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITPV-VTVVYRPARRLVGY 445

Query: 417 QIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATS 476
           + + +   K ++EL+++ C+H P N+ + INLL  S PT  SP+ + VLHL++L G+A++
Sbjct: 446 KRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASA 505

Query: 477 IFVSHQSKNKNI----YTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDICT 532
           + + H ++         T   S+++I +F+ +   H G  S+   TAISP   MH+D+C 
Sbjct: 506 MLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQ-HAGCVSVQPLTAISPYSTMHEDVCN 564

Query: 533 LALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNLKRPVT 592
           LA DK  SL+I+PFH+   +DG +E+ +   R +N  VL  APCSVGIL+D G       
Sbjct: 565 LAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRG----LSG 620

Query: 593 HTDSSSADSLSNVAMLFIGGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGDV----- 647
            T  +S     +VA+LF GG DDREAL +A RM     + LTV+ FI   D         
Sbjct: 621 ATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPA 680

Query: 648 ---------------DWETILDSEVLRGVK----NSEYIRYVKHVVKDGAETVKIVHSIV 688
                            E  LD E +   +     +E I Y + VV +G ETV  + S+ 
Sbjct: 681 SSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTEKVVSNGEETVAAIRSMD 740

Query: 689 SEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVMQQ 742
           S  +L IVGR   + SP T+ L  WSE PELG +GDLLAS D     SVLV+QQ
Sbjct: 741 SAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQ 794

Length = 832
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 746
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.92
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.91
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.86
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.85
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.8
PRK11175305 universal stress protein UspE; Provisional 99.76
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.71
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.45
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.43
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.41
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.23
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.2
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 99.17
PRK15456142 universal stress protein UspG; Provisional 99.11
PRK15005144 universal stress protein F; Provisional 99.11
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 99.09
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 99.07
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 99.05
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 99.04
cd01987124 USP_OKCHK USP domain is located between the N-term 98.97
PRK15118144 universal stress global response regulator UspA; P 98.94
PRK09982142 universal stress protein UspD; Provisional 98.94
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.9
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.87
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.87
PRK10116142 universal stress protein UspC; Provisional 98.76
PRK11175305 universal stress protein UspE; Provisional 98.69
cd00293130 USP_Like Usp: Universal stress protein family. The 98.65
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.52
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.47
PRK15005144 universal stress protein F; Provisional 98.36
PRK09982142 universal stress protein UspD; Provisional 98.36
cd01987124 USP_OKCHK USP domain is located between the N-term 98.33
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.22
PRK15118144 universal stress global response regulator UspA; P 98.21
COG0589154 UspA Universal stress protein UspA and related nuc 98.18
cd00293130 USP_Like Usp: Universal stress protein family. The 98.15
PRK10116142 universal stress protein UspC; Provisional 98.14
PRK15456142 universal stress protein UspG; Provisional 98.13
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 98.09
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.74
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 97.52
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 97.33
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 97.31
PRK12652357 putative monovalent cation/H+ antiporter subunit E 97.11
TIGR00841286 bass bile acid transporter. Functionally character 96.99
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 96.98
COG0385319 Predicted Na+-dependent transporter [General funct 96.97
TIGR00832328 acr3 arsenical-resistance protein. The first prote 96.77
COG3180352 AbrB Putative ammonia monooxygenase [General funct 96.76
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 96.74
TIGR00698335 conserved hypothetical integral membrane protein. 96.72
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 96.61
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 96.51
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 96.5
COG0589154 UspA Universal stress protein UspA and related nuc 96.44
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 96.43
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 96.22
TIGR00930953 2a30 K-Cl cotransporter. 96.04
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 96.01
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 96.0
PRK10490 895 sensor protein KdpD; Provisional 95.84
COG3493438 CitS Na+/citrate symporter [Energy production and 95.06
PRK03562621 glutathione-regulated potassium-efflux system prot 94.34
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 94.22
PRK03818552 putative transporter; Validated 94.22
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 94.13
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 94.11
PRK03659601 glutathione-regulated potassium-efflux system prot 93.98
PF03956191 DUF340: Membrane protein of unknown function (DUF3 93.83
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 93.6
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 93.39
PRK10669558 putative cation:proton antiport protein; Provision 92.77
PRK05326562 potassium/proton antiporter; Reviewed 92.68
COG2855334 Predicted membrane protein [Function unknown] 92.3
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 92.25
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 92.16
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 91.9
PRK10490 895 sensor protein KdpD; Provisional 91.48
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 91.03
PLN03159832 cation/H(+) antiporter 15; Provisional 90.49
COG0475397 KefB Kef-type K+ transport systems, membrane compo 90.14
COG2855334 Predicted membrane protein [Function unknown] 89.88
PRK04972558 putative transporter; Provisional 89.46
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 89.43
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 89.38
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 89.13
TIGR00698335 conserved hypothetical integral membrane protein. 89.07
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 87.74
TIGR01625154 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati 86.62
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 86.27
PF03956191 DUF340: Membrane protein of unknown function (DUF3 84.83
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 83.16
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 82.38
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 82.1
COG2985544 Predicted permease [General function prediction on 82.06
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 82.01
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 81.72
PRK04972558 putative transporter; Provisional 81.14
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.6e-145  Score=1284.33  Aligned_cols=722  Identities=33%  Similarity=0.581  Sum_probs=654.3

Q ss_pred             cccCCCCccccccccccccCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHhcCcccccccc
Q 047826            4 ACINLPPEVNSAGLLTQFEGGVKDYKWLDYTTPRIMFLIATMLIISQAFHSVLKRFGIPIFISQIFAGLLLSRPVLQVIK   83 (746)
Q Consensus         4 ~c~~~~~~~~~~g~~~~~~~~~~~~~pl~~~~~~~l~~i~~il~~a~~~~~l~~rl~~P~iv~~Il~GiilGP~~Lg~~~   83 (746)
                      +|++ +++.+|+|+|+       |+||++|++|++++|+++++++++++++++||+|||+++|||++|+++||++||+++
T Consensus        18 ~c~~-~~~~~s~g~~~-------g~~pl~~~l~~~llql~lil~~a~l~~~ll~rl~~P~ivgeIlaGIlLGPs~lg~i~   89 (832)
T PLN03159         18 VCYA-PMMITTNGIWQ-------GDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSE   89 (832)
T ss_pred             cccc-CCCccCCcccc-------cCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHhcCHhhhCcCh
Confidence            4984 43569999999       999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccccCcc-cHHHHHHHHHHHHHHHHHHhhcccChHHHHhchhhHHHHHHHHHHHHHHhhhcceeeec-CC--------
Q 047826           84 VADKIITPE-HVQLIGSMGNIGIAFFIFQSGVKMDISMVAKVGRKAWYIGILSVIAPLVALIPGSMVPS-GG--------  153 (746)
Q Consensus        84 ~~~~~lfp~-~~~~l~~la~lgl~~llF~~Gle~d~~~l~~~~~~~~~i~~~~~~~p~~l~~~~~~~~~-~g--------  153 (746)
                      .+.+.+||. +.+.++.++++|++|+||++|+|+|++.+|+++|+++.+|+.++++|+++   |+++++ ++        
T Consensus        90 ~~~~~~fp~~~~~~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~l---g~~~~~~l~~~~~~~~~  166 (832)
T PLN03159         90 VFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCI---GLAFSFIFHQVSRNVHQ  166 (832)
T ss_pred             hhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHH---HHHHHHHHhhcccccch
Confidence            888889998 77789999999999999999999999999999999999999999999998   776554 21        


Q ss_pred             hhHHHHHHHHHhhccHHHHHHHHhhccccCCchhHHHHHHHhHHhHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH
Q 047826          154 GPTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIV  233 (746)
Q Consensus       154 ~~~~l~ig~~ls~Ts~~vv~~il~el~l~~s~~g~l~ls~a~i~D~~~~~ll~i~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (746)
                      ....+++|+++|.||+||++++|+|+|+++++.||+++++++++|+++|++++++.+....+.+....+|.++..++|++
T Consensus       167 ~~~~l~~g~alS~Ts~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~~~~~~~l~~~l~~~~f~~  246 (832)
T PLN03159        167 GTFILFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVL  246 (832)
T ss_pred             hHHHHHHHHHHHHhhHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHH
Confidence            14578999999999999999999999999999999999999999999999998887665433333456677777888888


Q ss_pred             HHHHHHHHHHHHHHHHcCCCccccc------------------ccchhhHHHHHHHHhhcCCCCchhhHHHHHhhHhHHH
Q 047826          234 IVMVVVRPAMLLIARMTPEGKEVSR------------------TGFEFTVLGLYILGLAVPHGPPLGSALVNKFDTMISG  295 (746)
Q Consensus       234 ~~~~v~r~~~~~~~~~~~~~~~~~~------------------~~G~~~~lgafiaGl~i~~~~~~~~~l~~kl~~~~~~  295 (746)
                      ++.+++||++.|+.||++++++..+                  .+|+|+++|||++|+++|+. |+++++.+|+++++++
T Consensus       247 ~~~~v~r~~~~~~~r~~~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~~-~~~~~l~ekle~~~~~  325 (832)
T PLN03159        247 FCFYVVRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNG-PLGVTLIEKLEDFVSG  325 (832)
T ss_pred             HHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCCc-chHHHHHHHHHHHHHH
Confidence            8999999999999999987765443                  23999999999999999984 7899999999999999


Q ss_pred             hhHHHHHHHHhhccCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHhHHHHHHHHHHhhh
Q 047826          296 FFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLAALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFAS  375 (746)
Q Consensus       296 ~f~PiFF~~~G~~~d~~~l~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~lg~~m~~kG~v~l~~~~~~~  375 (746)
                      +|+|+||+++|+++|+..+.+...| ..+++++++++++|+++++++++++|+|++|++.+|++|++||+++++++++++
T Consensus       326 lflPlFFv~vGl~idl~~l~~~~~~-~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~Lii~~ig~  404 (832)
T PLN03159        326 LLLPLFFAISGLKTNVTKIQGPATW-GLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGR  404 (832)
T ss_pred             HHHHHHHHHhhheeeHHHhcCchHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence            9999999999999999888655445 445667778899999999999999999999999999999999999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhhhHHHHHhhcCcccccccccccccccCCCCCcceeEEEecCCCChhhHHHHHHhhCCC
Q 047826          376 DGRYVSPNMFRFMLGVVIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCKPESELQIVSCIHVPSNIISAINLLSISSPT  455 (746)
Q Consensus       376 ~~~~i~~~~~~~lv~~~lltt~i~~~l~~~~~~p~~~~~~~~~r~i~~~~~~~e~riLv~i~~~~~~~~li~l~~~~~~~  455 (746)
                      +.|+++++.|++++++++++|.+.+|++.++|||+|||..|++|++|+.++++|+|||+|+|++++++++++|++.++++
T Consensus       405 ~~gvi~~~~f~~lVl~avl~T~i~~Plv~~ly~p~rk~~~~~~r~i~~~~~~~elriL~cv~~~~~v~~li~Lle~s~~t  484 (832)
T PLN03159        405 DQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPT  484 (832)
T ss_pred             hcCccCchhhhHHHHHHHHHHHHHHHHHHHHhCHHhhhccccccccccCCCCCceeEEEEeccCCcHHHHHHHHHhcCCC
Confidence            99999999999999999998999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEEEeeeccCCCcceeeecccccccc----cccccchHHHHHHHHhccccCcceEEEEEEEEcCCCChHHHHH
Q 047826          456 NESPMVVNVLHLIKLNGQATSIFVSHQSKNKNI----YTYCYSENVILSFKKFGGLHWGAASINAFTAISPPDLMHDDIC  531 (746)
Q Consensus       456 ~~sp~~v~~lhlvel~~r~~~~~~~~~~~~~~~----~~~~~~~~i~~~f~~~~~~~~~~v~v~~~~~vs~~~~~~~~I~  531 (746)
                      +++|+++|++||+|+++|++|.++.|+.+++..    ....++++++++|+.|++++ ++|+++++|++||+++||+|||
T Consensus       485 ~~sp~~vy~lhLveL~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~-~~v~v~~~t~vs~~~~mh~dIc  563 (832)
T PLN03159        485 KRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQPLTAISPYSTMHEDVC  563 (832)
T ss_pred             CCCCceEEEEEEEeecCCCccceeeeecccccccccccccccccHHHHHHHHHHhhc-CceEEEEEEEEeCcccHHHHHH
Confidence            999999999999999999999999997643211    12345799999999999754 5799999999999999999999


Q ss_pred             HHHhhcCCcEEEecCccccccCCcccccchhhHHHHHHHhccCCCceEEEecCCCCC-CCccccCCCCcCCcceEEEEec
Q 047826          532 TLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVGILIDHGNLK-RPVTHTDSSSADSLSNVAMLFI  610 (746)
Q Consensus       532 ~~a~e~~a~lII~p~h~~~~~dg~~~~~~~~~~~~n~~Vl~~ApcsVgilvdr~~~~-~~~~~~~~~~~~~~~~I~~~f~  610 (746)
                      +.|+|+++++||+||||+|+.||.++++++.+|.+|+||+++|||||||+||||.+. ++...     ....+||+++|+
T Consensus       564 ~~A~d~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~~~~~~~-----~~~~~~v~~~F~  638 (832)
T PLN03159        564 NLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLAS-----NQVSHHVAVLFF  638 (832)
T ss_pred             HHHHhcCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCccccccc-----cccceeEEEEec
Confidence            999999999999999999999999999999999999999999999999999999631 11111     344679999999


Q ss_pred             cCcChHHHHHHHHHhhhCCCeEEEEEEeeecCCCCC--------------------CchhhhhHHHHHHhcccC---C-C
Q 047826          611 GGNDDREALTFAKRMVRDNKVRLTVVHFIAESDDGD--------------------VDWETILDSEVLRGVKNS---E-Y  666 (746)
Q Consensus       611 gg~ddreAl~~a~rma~~~~v~ltv~~~~~~~~~~~--------------------~~~~~~~d~~~i~~~~~~---~-~  666 (746)
                      ||+||||||+||+|||+||++++||+||++++...+                    ++.|+++||++++||+.+   + +
T Consensus       639 GG~DDREALa~a~rma~~p~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~ef~~~~~~~~~  718 (832)
T PLN03159        639 GGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNES  718 (832)
T ss_pred             CCcchHHHHHHHHHHhcCCCeEEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHhcCCCCc
Confidence            999999999999999999999999999986533221                    345788999999999986   3 8


Q ss_pred             eEEEEEEecChhHHHHHHHhhccCCcEEEEcccCCCCCccccccccCCCCCccchhhhhhhcCCCCCcccEEEEEEee
Q 047826          667 IRYVKHVVKDGAETVKIVHSIVSEFELIIVGRRYNLESPQTSCLKQWSEFPELGILGDLLASKDLGGKCSVLVMQQQR  744 (746)
Q Consensus       667 v~y~e~~v~~g~~~~~~i~~~~~~~DLiiVG~~~~~~~~~~~gl~~w~e~~eLG~igd~las~~~~~~~svLvvqq~~  744 (746)
                      +.|.|++|+||+|+++.+|++.++|||+||||+|+.+|++|+||+||+||||||+|||+|||+||++++||||||||+
T Consensus       719 v~y~E~~V~~~~e~~~~l~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~~~~~SVLVvQQ~~  796 (832)
T PLN03159        719 IVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQYV  796 (832)
T ss_pred             eEEEEEecCCHHHHHHHHHHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCCCCceeEEEEEeec
Confidence            999999999999999999999989999999999987899999999999999999999999999999999999999996

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>COG2985 Predicted permease [General function prediction only] Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query746
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.1 bits (116), Expect = 5e-06
 Identities = 110/682 (16%), Positives = 204/682 (29%), Gaps = 232/682 (34%)

Query: 6   INLPPEVNSAGLL------------TQFEGGV--KDYKWL------DYTTPRIMFLIATM 45
           I     V+    L             +F   V   +YK+L      +   P +M    T 
Sbjct: 55  IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM----TR 110

Query: 46  LIISQAFHSVLKRFGIPIFISQIFAGLLLSR--PVLQVIKVADKIITPEHVQLIGSMGNI 103
           + I Q     L         +Q+FA   +SR  P L++ +   ++   ++V + G +   
Sbjct: 111 MYIEQ--RDRLYN------DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VLGS 161

Query: 104 G---IAFFIFQSGVKMDISMVAKVGRKAWYIGI------LSVIAPLVALIPGSMVPSGGG 154
           G   +A       V +   +  K+  K +++ +       +V+  L  L+   + P+   
Sbjct: 162 GKTWVA-----LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY-QIDPN--- 212

Query: 155 PTGLFITPLYYMTAYPVIFCLLTHLKILNSELGRLAQSSAIVADFLSYATILFLTLSQVA 214
               + +   + +   +       +  + +EL RL +S         Y   L L L  V 
Sbjct: 213 ----WTSRSDHSSNIKL------RIHSIQAELRRLLKSK-------PYENCL-LVLLNVQ 254

Query: 215 YSSPPKAIQL-C-VYILTFIVIVMVVVRPAMLLIARMTPEGKEVSRTGF-EFTVLGLYIL 271
            +    A  L C + + T    V   +       A  T    +          V  L   
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSA-----ATTTHISLDHHSMTLTPDEVKSL--- 306

Query: 272 GLAVPHGPPLGSALVNKFDTMISGFFLPIFVTTSAMRLHDLSLHTFNSLIWHNIALAGLA 331
                    L   L  +         LP       +  +   L    S+I         A
Sbjct: 307 ---------LLKYLDCRPQD------LPR----EVLTTNPRRL----SII---------A 334

Query: 332 ALVKFGACALLLLYWKMHRNDAMALALIMNIKGIVEMAFYTFASDGRYVSPNMFRFMLGV 391
             ++ G        WK    D +          I+E +                      
Sbjct: 335 ESIRDGLA--TWDNWKHVNCDKL--------TTIIESSLNVLE----------------- 367

Query: 392 VIVTGSVVPILVRKLYDPSRKYAGYQIKKLVDCK--PESELQIVSCIHVPSNIISAINLL 449
                   P   RK++D                   P S        H+P+ ++S   L+
Sbjct: 368 --------PAEYRKMFD--------------RLSVFPPS-------AHIPTILLS---LI 395

Query: 450 SISSPTNESPMVVNVLHLIKLNGQATSIFVSHQSKNKNIYTYCYSENVILSFKK----FG 505
                 ++  +VVN LH   L        V  Q K   I       ++ L  K       
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSL--------VEKQPKESTISIP----SIYLELKVKLENEY 443

Query: 506 GLHWGAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRN 565
            LH   + ++ +    P     DD+    LD+        F+   +I   L++ +     
Sbjct: 444 ALH--RSIVDHYNI--PKTFDSDDLIPPYLDQY-------FY--SHIGHHLKNIEHP--- 487

Query: 566 LNLCVLEKAPCSVGILIDHGNLKRPVTHTDSSSADSLSNVAML--------FIGGNDDRE 617
                 E+      + +D   L++ + H  ++   S S +  L        +I  ND + 
Sbjct: 488 ------ERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY 541

Query: 618 ALTFAKRMVRDNKVRLTVVHFI 639
                +R+V        ++ F+
Sbjct: 542 -----ERLVNA------ILDFL 552
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query746
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.89
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.78
3loq_A294 Universal stress protein; structural genomics, PSI 99.75
3olq_A319 Universal stress protein E; structural genomics, P 99.74
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.73
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.69
3fdx_A143 Putative filament protein / universal stress PROT; 99.13
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 99.06
3s3t_A146 Nucleotide-binding protein, universal stress PROT 99.05
3dlo_A155 Universal stress protein; unknown function, struct 99.04
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 99.04
3tnj_A150 Universal stress protein (USP); structural genomic 99.02
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 99.02
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.98
2z08_A137 Universal stress protein family; uncharacterized c 98.94
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.93
3fg9_A156 Protein of universal stress protein USPA family; A 98.93
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.85
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.79
1q77_A138 Hypothetical protein AQ_178; structural genomics, 98.59
3mt0_A290 Uncharacterized protein PA1789; structural genomic 98.57
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.54
3olq_A319 Universal stress protein E; structural genomics, P 98.47
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.46
3loq_A294 Universal stress protein; structural genomics, PSI 98.45
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.44
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.43
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.41
3dlo_A155 Universal stress protein; unknown function, struct 98.39
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.38
3fdx_A143 Putative filament protein / universal stress PROT; 98.36
3tnj_A150 Universal stress protein (USP); structural genomic 98.34
2z08_A137 Universal stress protein family; uncharacterized c 98.33
3fg9_A156 Protein of universal stress protein USPA family; A 98.25
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.24
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 98.19
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.07
1q77_A138 Hypothetical protein AQ_178; structural genomics, 97.88
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 97.82
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.71
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 95.88
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.89  E-value=3.1e-23  Score=223.14  Aligned_cols=291  Identities=14%  Similarity=0.095  Sum_probs=214.1

Q ss_pred             HHHHHHHHHHHHHHHHhhcccChHHH----Hhchh--hHHHHHHHHHHHHHHhhhcceeeecCChhHHHHHHHHHhhccH
Q 047826           96 LIGSMGNIGIAFFIFQSGVKMDISMV----AKVGR--KAWYIGILSVIAPLVALIPGSMVPSGGGPTGLFITPLYYMTAY  169 (746)
Q Consensus        96 ~l~~la~lgl~~llF~~Gle~d~~~l----~~~~~--~~~~i~~~~~~~p~~l~~~~~~~~~~g~~~~l~ig~~ls~Ts~  169 (746)
                      ....+.+-.+.+|||.+|+|+|.+.+    ++.+|  .+...++.|+++|+++   +.++.+ +...+.....+.+.|+.
T Consensus        59 l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~i---y~~~~~-~~~~~~~gw~ip~ATdI  134 (388)
T 1zcd_A           59 MLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALL---YLAFNY-ADPITREGWAIPAATDI  134 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHH---HGGGCC-SSTTHHHHTSSSSCCCH
T ss_pred             HHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHH---HHHHhc-CChhhhhhhHHHHHHHH
Confidence            45566777888999999999999877    55555  3788899999999999   644332 33445566666778999


Q ss_pred             HHHHHHHhhccc-cCCchhHHHHHHHhHHhHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047826          170 PVIFCLLTHLKI-LNSELGRLAQSSAIVADFLSYATILFLTLSQVAYSSPPKAIQLCVYILTFIVIVMVVVRPAMLLIAR  248 (746)
Q Consensus       170 ~vv~~il~el~l-~~s~~g~l~ls~a~i~D~~~~~ll~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~  248 (746)
                      +....++..++. .++..++.+++.|++||+.+|++++++.+   ++.+   ..+... .+++.+...++         +
T Consensus       135 Afal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt---~~~~---~~~l~~-~~~~~~~~~~l---------~  198 (388)
T 1zcd_A          135 AFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT---NDLS---MASLGV-AAVAIAVLAVL---------N  198 (388)
T ss_dssp             HHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC---CCCC---HHHHHH-HHHHHHHHHHH---------H
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc---CCcc---HHHHHH-HHHHHHHHHHH---------H
Confidence            999999999865 55567799999999999999999998863   2222   222221 22222222222         2


Q ss_pred             HcCCCcc------------cccccchhhHHHHHHHHhhcCCCC----chhhHHHHHhhHhHHHhhHHHH-HHHHhhccCc
Q 047826          249 MTPEGKE------------VSRTGFEFTVLGLYILGLAVPHGP----PLGSALVNKFDTMISGFFLPIF-VTTSAMRLHD  311 (746)
Q Consensus       249 ~~~~~~~------------~~~~~G~~~~lgafiaGl~i~~~~----~~~~~l~~kl~~~~~~~f~PiF-F~~~G~~~d~  311 (746)
                      |....+.            ..+..|+|+++|+|++|+++|..+    +..+++++++++++..+++|+| |+..|.++|.
T Consensus       199 r~~v~~~~~y~~lgl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilPlFaFanaGv~l~~  278 (388)
T 1zcd_A          199 LCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQG  278 (388)
T ss_dssp             HTTCCCTHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHHHHHHHHCCCCCSS
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeecc
Confidence            2111111            012339999999999999999853    3568899999999999999999 9999999998


Q ss_pred             ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCChHHHHHHHHHHHhHHHHHHHHHHhhhcCCC--
Q 047826          312 LSLHTFNSLIWHNIALAGLAALVKFGACALLLLYW----------KMHRNDAMALALIMNIKGIVEMAFYTFASDGRY--  379 (746)
Q Consensus       312 ~~l~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~----------~~~~~~~~~lg~~m~~kG~v~l~~~~~~~~~~~--  379 (746)
                      ..+.....  .....+++..+++|++|++..++..          |++|+|...+|.+++.++++++++++++++.+.  
T Consensus       279 ~~~~~l~~--~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftmsL~Ia~laf~~~~~~  356 (388)
T 1zcd_A          279 VTLDGLTS--ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPE  356 (388)
T ss_dssp             SCCCTHHH--HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHHHHHHHHHSTTSSCS
T ss_pred             cchhhccC--hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHHHHHHHHhccCCchh
Confidence            53221111  1122444455889999966666665          899999999999999999999999999998876  


Q ss_pred             CChhhHHHHHHHHHHHHhhhHHHHHhhcC
Q 047826          380 VSPNMFRFMLGVVIVTGSVVPILVRKLYD  408 (746)
Q Consensus       380 i~~~~~~~lv~~~lltt~i~~~l~~~~~~  408 (746)
                      +.++.+..+++++++++++++.+.|+.++
T Consensus       357 ~~~~ak~~il~~s~~s~i~g~~~L~~~~~  385 (388)
T 1zcd_A          357 LINWAKLGILVGSISSAVIGYSWLRVRLR  385 (388)
T ss_dssp             SHHHHHHHHHHHHHTTTSTTTGGGTTTC-
T ss_pred             hHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            35677999999999999999988876653
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query746
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 99.21
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 99.18
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 99.06
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.94
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.93
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.74
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.54
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.54
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.35
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.2
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.08
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 97.32
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.21  E-value=3.9e-11  Score=112.21  Aligned_cols=143  Identities=14%  Similarity=0.109  Sum_probs=96.1

Q ss_pred             eeEEEecCCCChhhHHHHHHhhCCCCCCCcEEEEEEeeeccCCCcceeeeccc----cccc--cc----ccccchHHHHH
Q 047826          431 QIVSCIHVPSNIISAINLLSISSPTNESPMVVNVLHLIKLNGQATSIFVSHQS----KNKN--IY----TYCYSENVILS  500 (746)
Q Consensus       431 riLv~i~~~~~~~~li~l~~~~~~~~~sp~~v~~lhlvel~~r~~~~~~~~~~----~~~~--~~----~~~~~~~i~~~  500 (746)
                      |||+|++.++....+++.+..++  +....+++++|+++..............    ....  ..    .....++..+.
T Consensus         5 ~ILvavD~s~~s~~al~~a~~la--~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
T d1mjha_           5 KILYPTDFSETAEIALKHVKAFK--TLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNK   82 (160)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHTC--CSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHH--HhcCCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999998  5556799999999876533221100000    0000  00    00111222223


Q ss_pred             HHHhccccC-cceEEEEEEEEcCCCChHHHHHHHHhhcCCcEEEecCccccccCCcccccchhhHHHHHHHhccCCCceE
Q 047826          501 FKKFGGLHW-GAASINAFTAISPPDLMHDDICTLALDKLASLVILPFHRTWYIDGSLESEDQTVRNLNLCVLEKAPCSVG  579 (746)
Q Consensus       501 f~~~~~~~~-~~v~v~~~~~vs~~~~~~~~I~~~a~e~~a~lII~p~h~~~~~dg~~~~~~~~~~~~n~~Vl~~ApcsVg  579 (746)
                      ++.+.+... .++.++.....   .+..+.|++.|++.++|+||||.|++....+.+      +|++.++|++++||||.
T Consensus        83 l~~~~~~~~~~gv~~~~~~~~---G~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~------~GS~a~~vl~~s~~pVl  153 (160)
T d1mjha_          83 MENIKKELEDVGFKVKDIIVV---GIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEIL------LGSVTENVIKKSNKPVL  153 (160)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEE---ECHHHHHHHHHHHTTCSEEEEESCCSSCCTTCS------SCHHHHHHHHHCCSCEE
T ss_pred             HHHHHHHHHhcCCeEEEEEEe---ccHHHHHhhhhhccccceEEeccCCCCcccccc------cCcHHHHHHhcCCCCEE
Confidence            333322111 45676666553   589999999999999999999999987666654      79999999999999998


Q ss_pred             EEecC
Q 047826          580 ILIDH  584 (746)
Q Consensus       580 ilvdr  584 (746)
                      |++.+
T Consensus       154 vV~~~  158 (160)
T d1mjha_         154 VVKRK  158 (160)
T ss_dssp             EECCC
T ss_pred             EEcCC
Confidence            88655
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure