Citrus Sinensis ID: 047872

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------51
Protein Sequence
MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRKADCTDDVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWPKYQNQKQPRPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQTPTLNGVAAATSTMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKKRLSYPAPEPHCCQNSRSSSFKSVPAGCGGYSSGIEQLSNYSSCYAESYGGEISPCPSGSRFSLNLWE
Secondary Structure (PSIPRED)
cccccccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHcccHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccEEEEEccc
Coil and Loop (DISEMBL)
mgkksgisWFTIVKRAfrspskndnekrnsrrredefELEEEEKKREKRRSlfrkadctdDVLLQRCEAKIAAISsantrttkpmnpilaseQGHAYALAAATAAAAMEIVRhsrpassyyvrEHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDqrtrfshegsrrslfaetndfwdsknlhdiksrksmssnnnasgtitiadwndhpctrqgIKEAVMKREKTLAYAFSNqvwrsrrnpsagdereLDERTKWLDRWMATKQWensatrastdrrdHIMKTVetdaswpkyqnqkqprppvsigiasplhraqpnlffhqspaltpsprktkpiqvrsasprsflkeqtsfsaaqtptlnGVAAATSTMPNYMAATESAKAkarsqsaprqgastsmlprersgsvkkrlsypapephccqnsrsssfksvpagcggyssgieqlsNYSScyaesyggeispcpsgsrfslnlwe
Flexible Loop (DISEMBL)
mgkksgiswftivkrafrspskndnekrnsrrredefeleeeekkrekrrslfrkadctddvlLQRCEAKIAaissantrttkpmNPILASEQGHAYALAAATAAAAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQAlvrgqnvrhqakltLKRVQALVRAQdmvrdqrtrfshegsrrslfaetndfwdsknlhdiksrksmssnnnasgtitiadwndhpCTRQGIKEAVMKREKTLAyafsnqvwrsrrnpsagdereldERTKWLDRwmatkqwensatrastdrrdHIMKTvetdaswpkyqnqkqprpPVSIGIASPLHRAQPNLFFHqspaltpsprktkpIQVRSASPRSFLKEQtsfsaaqtptLNGVAAATSTMPNYMAATESAkakarsqsaprqgastsmlprersgsvKKRLSYPAPEPHCCQNSRSSSFKSVPAGCGGYSSGIEQLSNYSSCYAESYGgeispcpsgsrfslnlwe
Low Complexity Region (SEG)
MGKKSGISWFTIVKRAFRSPSKNDNEKRNsrrredefeleeeekkrekrrslfrkADCTDDVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHayalaaataaaaMEIVRHSRPASSYYVREHYAATVIQTSFRGYlarralralKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWPKYQNQKQPRPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQTPTLNGVAAATSTMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKKRLSYPAPEPHCCQNSRSSSFKSVPAGCGGYSSGIEQLSNYSSCYAESYGGEISPCPSGSRFSLNLWE
Disordered region (IsUnstruct)
******ISWFTIVKR***************************************KADCTDDVLLQRCEAKIAAIS************ILASEQGHAYALAAATAAAAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQ*************************************************TITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVW******************KWLDRWMATK*****************************************************************************************************************************************************************************CGGYSSGIEQLSNYSSCYAESYG******************
Disordered Region (DISOPRED)
*GKKSGISWFTIV****************************************************************************************************************YAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQA**************************************************************************************************************WLDRWMA******************************************************************************************************************************************************************************************************************S*NLW*
Disordered Region (DISEMBL)
MGKKSGISWFTIVKRAFRS*******************************SLFRKADCTDDVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVWR************LDERTKWLDRWMATKQW**********RRDHIMKTVETDASWP*********PPVSIGIASPLHRAQPNLFFHQSPALT***************PRSFLKEQTSFSAAQTPTLNGVAAATSTMPNYMA************************************************************CGGYSSGIEQLSNYSSCYAESYGGEISPCPSGSRFSLNLWE
Disordered Region (DISPRO)
***************************************************************************************************************R*SRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHD*************SGTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVWRSR***********DERTKWLDRWMATKQWE**************************************************************************************************************************************************************************************************EISPCPSGSRFSLNLWE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKKSGISWFTIVKRAFRSPSKNDNExxxxxxxxxxxxxxxxxxxxxKRRSLFRKADCTDDVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWPKYQNQKQPRPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQTPTLNGVAAATSTMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKKRLSYPAPEPHCCQNSRSSSFKSVPAGCGGYSSGIEQLSNYSSCYAESYGGEISPCPSGSRFSLNLWE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	508	2.2.26 [Sep-21-2011]
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.318	0.242	0.320	4e-17
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.344	0.385	0.319	4e-17
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.120	0.103	0.506	4e-12
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.133	0.085	0.5	9e-09

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 19/181 (10%)

Query: 109 EIVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKL 168
           EIV   RP  +  V +H +AT IQ +FRGY+AR++ RALKGLV+LQ +VRG +V+ Q   
Sbjct: 309 EIV--YRPEPTLPV-QHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTIN 365

Query: 169 TLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNAS 228
            +K +Q +VR Q  ++ +R +     ++     +    W +          S + N+N  
Sbjct: 366 AMKYMQQVVRVQSQIQSRRIKMLENQAQ---VEKDEAKWAA----------SEAGNDNWD 412

Query: 229 GTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDERTKWLD 288
            ++   +  D    R+   +A++KRE+++AYA+S ++W++    S  D R   +   W+D
Sbjct: 413 DSVLTKEERDSRSQRK--TDAIIKRERSMAYAYSRKLWKNSPK-STQDNRSFPQWWNWVD 469

Query: 289 R 289
           R
Sbjct: 470 R 470

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 19/194 (9%)

Query: 123 REHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDM 182
           +E  AA +IQ++FRG+LARR  + ++G  +L+ L+ G  V+ QA +TLK +Q L R Q  
Sbjct: 106 KEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQ 165

Query: 183 VRDQRTRFSHEGSRR--SLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWNDHP 240
           +R +R R S E   R   L  +      +K L  +K+  + + +N +   +     + + 
Sbjct: 166 IRSRRIRMSEENQARHKQLLQK-----HAKELGGLKNGGNWNYSNQSKEQVEAGMLHKY- 219

Query: 241 CTRQGIKEAVMKREKTLAYAFSNQ----VWRSRRNPSAGDERELDERTKWLDRWMATKQW 296
                  EA M+RE+ LAYAF++Q     +    NP   D         WL+RWMA + W
Sbjct: 220 -------EATMRRERALAYAFTHQQNLKSFSKTANPMFMDPSNPTWGWSWLERWMAGRPW 272

Query: 297 ENSATRASTDRRDH 310
           E+S    +T   D+
Sbjct: 273 ESSEKEQNTTNNDN 286

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 73.6 bits (179), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 47/73 (64%)

Query: 122 VREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQD 181
           ++   AAT +Q +FRGYLARRA  ALKG+++LQAL+RG  VR QA  TL  V  +VR Q 
Sbjct: 110 IQREIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQA 169

Query: 182 MVRDQRTRFSHEG 194
             R +  R S  G
Sbjct: 170 FARGREIRKSDIG 182

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 62.4 bits (150), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 2/70 (2%)

Query: 129 TVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRT 188
            VIQ + RG+LARR L   K ++KLQA VRG  VR QA  +L+ VQA+V+ Q MVR + +
Sbjct: 219 VVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHS 278

Query: 189 RFSHEGSRRS 198
             + +GSR S
Sbjct: 279 --TKDGSRVS 286

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	508
255555773	534	conserved hypothetical protein [Ricinus	0.935	0.889	0.556	1e-124
224115544	552	predicted protein [Populus trichocarpa]	0.944	0.869	0.549	1e-122
225426562	533	PREDICTED: uncharacterized protein LOC10	0.897	0.855	0.544	1e-117
147790453	537	hypothetical protein VITISV_042862 [Viti	0.907	0.858	0.542	1e-116
255578224	545	calmodulin binding protein, putative [Ri	0.923	0.860	0.482	1e-110
225453606	557	PREDICTED: protein IQ-DOMAIN 14 [Vitis v	0.942	0.859	0.512	1e-110
356522486	546	PREDICTED: uncharacterized protein LOC10	0.946	0.880	0.513	1e-109
356559797	550	PREDICTED: uncharacterized protein LOC10	0.946	0.874	0.509	1e-107
297742449	473	unnamed protein product [Vitis vinifera]	0.834	0.896	0.533	1e-107
449478027	469	PREDICTED: protein IQ-DOMAIN 14-like [Cu	0.826	0.895	0.440	2e-85

>gi|255555773|ref|XP_002518922.1| conserved hypothetical protein [Ricinus communis] gi|223541909|gb|EEF43455.1| conserved hypothetical protein [Ricinus communis]

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 304/546 (55%), Positives = 370/546 (67%), Gaps = 71/546 (13%)

Query: 1   MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRKADCTD 60
           M KKSG SW TIVKRAFRSP K +NE ++SRRRE+    EEEEKKREKRR LFRK + ++
Sbjct: 1   MEKKSGTSWLTIVKRAFRSPIK-ENETKSSRRREEH-VQEEEEKKREKRRWLFRKTN-SN 57

Query: 61  DVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAME----------I 110
            + +Q+ EAK    ++     T P++P L ++Q HA A+AA TAAAA            I
Sbjct: 58  SIHVQQYEAKTVTNTNDAATNTIPVSPALGAQQSHAIAVAAVTAAAAEAAAATAQAAVEI 117

Query: 111 VRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTL 170
           VR +RP  S +VRE  AA +IQT+FRGYLARRALRALKGLVKLQALVRG NVR QAKLTL
Sbjct: 118 VRLTRP--SGFVRERRAAVIIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKLTL 175

Query: 171 KRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGT 230
           K +QALVR QD VRDQR R SHEGSR+S+FAET+  W+S+ L +++ R+S+S +     +
Sbjct: 176 KCMQALVRVQDRVRDQRARLSHEGSRKSMFAETDGLWESRYLQEVRERRSLSRD----LS 231

Query: 231 ITIADWNDHPCTR-------QGIKEAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDER 283
             + DW+D   T        Q  KEA +KREK LAYAFS+Q+WRSRRNPSAGDE+EL+ER
Sbjct: 232 FILDDWDDRQYTSGELEAIVQNKKEAALKREKALAYAFSSQIWRSRRNPSAGDEKELEER 291

Query: 284 TKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWP-------------KYQNQKQP 330
           T+WLDRWMATKQWE++++R STDRR+ I KTVE D S P             + QN +Q 
Sbjct: 292 TRWLDRWMATKQWESNSSRGSTDRREAI-KTVEIDTSRPYSYSTPTSFVRRSQSQNHQQK 350

Query: 331 RPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQTP 390
           +P  S+ + +P+H    NL  HQSP +TPSP KTKP+QVRSASPR   KE+  FSAA TP
Sbjct: 351 QPSPSL-LRAPVHH---NLCLHQSP-ITPSPCKTKPLQVRSASPRC-PKEEKCFSAAHTP 404

Query: 391 TLN-----GVAAA----TSTMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKK 441
           +L+     G+ A+     + +PNYMAATESAKA+ RSQSAPRQ  ST    R  S S KK
Sbjct: 405 SLSSRYRYGMGASGVNTAAAIPNYMAATESAKARVRSQSAPRQRPSTPERERGGSSSAKK 464

Query: 442 RLSYPAPEPHC-----C------QNSRSSSFKSVPAGCGGYSSGIEQLSNYSSCYAESYG 490
           RLSYPAPEPHC     C      QN RS SFKSV  G      G++  SNY S Y ES G
Sbjct: 465 RLSYPAPEPHCSNIIGCSNSSFSQNLRSPSFKSVQCGL----LGMDHRSNY-SFYTESIG 519

Query: 491 GEISPC 496
           GEISPC
Sbjct: 520 GEISPC 525

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115544|ref|XP_002317060.1| predicted protein [Populus trichocarpa] gi|222860125|gb|EEE97672.1| predicted protein [Populus trichocarpa]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 307/559 (54%), Positives = 371/559 (66%), Gaps = 79/559 (14%)

Query: 1   MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRK-ADCT 59
           MGKK G SW TIVKRAFRSPSK +NEK++SRRRE+  + EEEEKKREKRR LFRK +  T
Sbjct: 1   MGKKGGTSWLTIVKRAFRSPSK-ENEKKSSRRREEH-DQEEEEKKREKRRWLFRKTSSST 58

Query: 60  DDVLLQRCEAKIAAISSANTRTTKPMNPILASEQ----------GHAYALAAATAAAAME 109
           + V +QRCE  IA I++  +  T P++P L +E+            A   AA TA AA+E
Sbjct: 59  NHVPVQRCEENIA-ITNTTSTATAPLSPTLDAEKKLAVAVAAATAAAADAAAVTAQAAVE 117

Query: 110 IVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLT 169
           IVR +RPAS +   + +AA  IQT+FRGYLARRALRALKGLVKLQALVRG NVR QAKLT
Sbjct: 118 IVRLTRPASIFVRAKLWAAIAIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKLT 177

Query: 170 LKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASG 229
           L+ +QAL R QD VRD R R SHEGSRRS+F+ETN  W+ K LH+I+ RKSMS + ++  
Sbjct: 178 LQYMQALARVQDRVRDHRARLSHEGSRRSMFSETNSSWEFKYLHEIRERKSMSRDVSS-- 235

Query: 230 TITIADWNDHPCTRQGI-------KEAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDE 282
              + DW+D P T + I       KEA +KREK LAYAFS+Q+WRSRRNPSAGDE+EL++
Sbjct: 236 --VLDDWDDRPRTNEEIEAMVESKKEAALKREKALAYAFSSQIWRSRRNPSAGDEKELED 293

Query: 283 RTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWP------------KYQNQKQP 330
           RT WLDRWMATKQWE S +RA TDR+D+ +KTVE D S P            + QN  Q 
Sbjct: 294 RTGWLDRWMATKQWEAS-SRAITDRKDNSIKTVEMDTSRPFSYSTTTSSQRLQSQNHLQK 352

Query: 331 RPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQTP 390
           + P    IASPLHR+  +L  HQSP +TPSP K +P+QVRSASPR   +E+  +SAA TP
Sbjct: 353 QTPRH-SIASPLHRSHSSLSLHQSP-ITPSPCKPRPLQVRSASPRCLKEEKKCYSAAHTP 410

Query: 391 TLN---------------GVAAATST-MPNYMAATESAKAKARSQSAPRQGASTSMLPRE 434
           +L+               G +  T+T +PNYMAATESAKA+ R QSAPRQ  ST    RE
Sbjct: 411 SLSSRYFMNNGIGRHGMVGASGGTATILPNYMAATESAKARVRPQSAPRQRPSTP--ERE 468

Query: 435 RSGSV-KKRLSYPAPE--PH--------------CCQNSRSSSFKSVPAGCGGYSSGIEQ 477
           R GSV KKRLS+P  +  PH                QN RS SFKSV  GC     G+ +
Sbjct: 469 RGGSVAKKRLSFPVQDHGPHGNGAGIIDYSSNRSFSQNLRSPSFKSV-HGC---HFGMGE 524

Query: 478 LSNYSSCYAESYGGEISPC 496
            SNY SCY ES GGEISPC
Sbjct: 525 QSNYFSCYNESIGGEISPC 543

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426562|ref|XP_002272492.1| PREDICTED: uncharacterized protein LOC100263362 [Vitis vinifera]

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 305/560 (54%), Positives = 354/560 (63%), Gaps = 104/560 (18%)

Query: 1   MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRK----A 56
           MGKK G SW T+VKRAFRSP K DNEK++SRRRE+    EEEE+KREKRR +FRK     
Sbjct: 1   MGKKGGSSWLTVVKRAFRSPIK-DNEKKSSRRREEHELEEEEEEKREKRRWIFRKPTTTT 59

Query: 57  DCTDDVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAME------- 109
             T+ V +Q CE K+  ISS       P NPIL +EQ HA A+AAATAAAA         
Sbjct: 60  TTTNHVQVQECETKM--ISSV------PTNPILVAEQRHAIAVAAATAAAAEAAVATAQA 111

Query: 110 ---IVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQA 166
              IVR +RP+S  + REHYAA VIQT+FRGYLAR ALRALKGLVKLQALVRG NVR QA
Sbjct: 112 AVEIVRLTRPSS--FFREHYAAVVIQTAFRGYLARTALRALKGLVKLQALVRGHNVRKQA 169

Query: 167 KLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNN 226
           K+TLK +QALVR Q  VRDQR R SHEGSRRS+FAETN  W+S+ L +I+ RKSMS + +
Sbjct: 170 KMTLKCMQALVRVQSRVRDQRARLSHEGSRRSMFAETNSLWESRYLQEIRHRKSMSRDRS 229

Query: 227 ASGTITIADWNDHPCTR-----------QGIKEAVMKREKTLAYAFSNQVWRSRRNPSAG 275
                +IA   D  C R           +  KE  +KREK LAYAFS+QVWRS RNP AG
Sbjct: 230 -----SIA---DECCGRPHEIEEIEAMFRSRKEGALKREKALAYAFSHQVWRSGRNPFAG 281

Query: 276 DERELDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWPK------------ 323
           DE +L+ERTKWL RWMATK+WE S++RASTD+RD I KTVE D S P             
Sbjct: 282 DEEDLEERTKWLQRWMATKRWE-SSSRASTDKRDAI-KTVEIDTSRPYSYSASNVRRSSV 339

Query: 324 YQNQKQPRPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTS 383
           YQNQ   RPP     ASP H+A  NL  H SP +TPSP KT+P+QVRSASPR  LKE+ S
Sbjct: 340 YQNQ-HLRPPTPHSTASPFHKAHHNLSLHLSP-VTPSPSKTRPLQVRSASPRC-LKEEES 396

Query: 384 FSAAQTPTLNGVA----------------AATSTMPNYMAATESAKAKARSQSAPRQGAS 427
            S A TP L  +                  A++ +PNYMAATESAKA+ RS+SAPRQ  S
Sbjct: 397 HSTAHTPNLASIHCFNGSMCRQGASTNGDVASAVLPNYMAATESAKARVRSESAPRQKPS 456

Query: 428 TSMLPRER-SGSVKKRLSYPAPEP-----------HCCQNSRSSSFKSVPAGCGGYSSGI 475
           T    RER  GS +KRLSYP PE               ++ RS SFKSV A         
Sbjct: 457 TP--ERERGGGSARKRLSYPVPEAPLSSTSTTCSSMLSKSLRSPSFKSVHA--------- 505

Query: 476 EQLSNYSSCYAESYGGEISP 495
               N SSCY +S GGEISP
Sbjct: 506 ----NLSSCYTDSLGGEISP 521

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790453|emb|CAN76669.1| hypothetical protein VITISV_042862 [Vitis vinifera]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 303/559 (54%), Positives = 351/559 (62%), Gaps = 98/559 (17%)

Query: 1   MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRS-LFRKADCT 59
           MGKK G SW T VKRAFRSP K DNEK++SRRRED    EEEE+K+ ++R  +FRK   T
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPXK-DNEKKSSRRREDHELEEEEEEKKREKRRWIFRKPTTT 59

Query: 60  DDVL-----LQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAME----- 109
                     Q CE K+  ISS    TT P NPIL +EQ HA A+AAATAAAA       
Sbjct: 60  TTTTKSCFKFQECETKM--ISS----TTVPTNPILVAEQRHAIAVAAATAAAAEAAVATA 113

Query: 110 -----IVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRH 164
                IVR +RP+S  + REHYAA VIQT+FRGYLAR ALRALKGLVKLQALVRG NVR 
Sbjct: 114 QAAVEIVRLTRPSS--FFREHYAAVVIQTAFRGYLARTALRALKGLVKLQALVRGHNVRK 171

Query: 165 QAKLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSN 224
           QAK+TLK +QALVR Q  VRDQR R SHEGSRRS+FAETN  W+S+ L +I+ RKSMS +
Sbjct: 172 QAKMTLKCMQALVRVQSRVRDQRARLSHEGSRRSMFAETNSLWESRYLQEIRHRKSMSRD 231

Query: 225 NNASGTITIAD-WNDHPCTRQGI-------KEAVMKREKTLAYAFSNQVWRSRRNPSAGD 276
            +     +IAD     P   + I       KE  +KREK LAYAFS+QVWRS RNP AGD
Sbjct: 232 RS-----SIADECCGXPHXIEEIEAMFRSRKEGALKREKALAYAFSHQVWRSGRNPFAGD 286

Query: 277 ERELDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWPK------------Y 324
           E +L+ERTKWL RWMATK+WE S++RASTD+RD I KTVE D S P             Y
Sbjct: 287 EEDLEERTKWLQRWMATKRWE-SSSRASTDKRDAI-KTVEIDTSRPYSXSASNVRRSSVY 344

Query: 325 QNQKQPRPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSF 384
           QNQ   RPP     ASP H+A  NL  H SP +TPSP KT+P+QVRSASPR  LKE+ S 
Sbjct: 345 QNQ-HLRPPTPHSTASPFHKAHHNLSLHXSP-VTPSPSKTRPLQVRSASPRC-LKEEESH 401

Query: 385 SAAQTPTLNGVA----------------AATSTMPNYMAATESAKAKARSQSAPRQGAST 428
           S A TP L  +                  A++ +PNYMAATESAKA+ RS+SAPRQ  ST
Sbjct: 402 STAHTPNLASIHCFNGSXCRXGASTNGDVASAVLPNYMAATESAKARVRSESAPRQXPST 461

Query: 429 SMLPRER-SGSVKKRLSYPAPEP-----------HCCQNSRSSSFKSVPAGCGGYSSGIE 476
               RER  GS +KRLSYP PE               ++ RS SFKSV A          
Sbjct: 462 P--ERERGGGSARKRLSYPVPEAPLSSTSTTCSSMLSKSLRSPSFKSVHA---------- 509

Query: 477 QLSNYSSCYAESYGGEISP 495
              N SSCY +S GGEISP
Sbjct: 510 ---NXSSCYTDSLGGEISP 525

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578224|ref|XP_002529980.1| calmodulin binding protein, putative [Ricinus communis] gi|223530542|gb|EEF32423.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 270/560 (48%), Positives = 331/560 (59%), Gaps = 91/560 (16%)

Query: 1   MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEE------------------ 42
           MGKK G SW T VKRAFRSP+K D +KR+SRRRED  + E                    
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPTK-DADKRSSRRREDHDQEEXXVSLICFGTMLMSFLLVLL 59

Query: 43  ---EKKREKRRSLFRKADCTDDVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYAL 99
               +KREKRR LFRK    + V+ Q+  +K A   +     +       A +Q HA A 
Sbjct: 60  WGFMQKREKRRWLFRKPSVQEPVI-QQAPSKAATDKATGGVISTDHVSNAAVDQKHATAS 118

Query: 100 AAATAAAAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRG 159
            AA  AA     R +RP  +Y+ REHYAA VIQT+FRGYLARRALRALKGLVKLQALVRG
Sbjct: 119 QAAAEAA-----RLTRP--TYHAREHYAAIVIQTAFRGYLARRALRALKGLVKLQALVRG 171

Query: 160 QNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRK 219
            NVR QAK+TL+ +QALVR Q  V DQR R SHEGSR+S F++TN   +S+ L DI  RK
Sbjct: 172 HNVRKQAKMTLRCMQALVRVQARVLDQRVRLSHEGSRKSAFSDTNSVIESRYLQDISDRK 231

Query: 220 SMSSNNNASGTITIADWNDHPCTRQGI-------KEAVMKREKTLAYAFSNQVWRSRRNP 272
           SMS      G+    DW++   T + +       KEA MKREKTL+   S Q+WR+RR+P
Sbjct: 232 SMSRE----GSSIADDWDERAHTVEEVKAMLQHRKEAAMKREKTLSQGLSQQIWRTRRSP 287

Query: 273 SAGDERELDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWP---------- 322
           S G++ EL ER +WLDRW+ATK W++S  RASTD+RD I KTVE D S P          
Sbjct: 288 SIGNDDELQERPQWLDRWIATKPWDSSRARASTDQRDPI-KTVEIDTSQPYSYLAPNFRR 346

Query: 323 ----KYQNQKQPRPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFL 378
               +Y  Q+Q RP      +SPLHRA      H SP +TPSP K++P+QVRSASPR  +
Sbjct: 347 TNHSQYHQQRQ-RP------SSPLHRAHQTAPHHHSP-VTPSPSKSRPVQVRSASPRC-I 397

Query: 379 KEQTSFSAAQTPTLNGVAAATST------------------MPNYMAATESAKAKARSQS 420
           +E   ++ +QTP+L      T                    +PNYMAATESAKA+ RSQS
Sbjct: 398 REDRIYNPSQTPSLRSNYHYTGNSHQRASGSSNNSNASTAALPNYMAATESAKARIRSQS 457

Query: 421 APRQGASTSMLPRERSGSVKKRLSYPAPEPHCC-----QNSRSSSFKSVPAGCGGYSSGI 475
           APRQ  ST    R  S + KKRLS+P P+P+          RS SFKSV    G +  G+
Sbjct: 458 APRQRPSTPERDRVGSATAKKRLSFPVPDPYNVGMGYGHGLRSPSFKSV---SGVHFGGL 514

Query: 476 EQLSNYSSCYAESYGGEISP 495
           EQ SNYSSC  ES GGEISP
Sbjct: 515 EQQSNYSSCCTESLGGEISP 534

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453606|ref|XP_002265121.1| PREDICTED: protein IQ-DOMAIN 14 [Vitis vinifera] gi|296089000|emb|CBI38703.3| unnamed protein product [Vitis vinifera]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 288/562 (51%), Positives = 350/562 (62%), Gaps = 83/562 (14%)

Query: 1   MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRKADCTD 60
           MGKK G SW T VKRAFRSP+K + +KR+ RRRE+  + E+EEKKREKRR +FRK    +
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPTK-ETDKRSGRRREEHDQEEDEEKKREKRRWIFRKPTNQE 59

Query: 61  DVLLQRCEAKIAAISSANTRTTKPMNPIL----ASEQGHAYALAAATAAAAMEIV----- 111
               Q      A+ S+       P+N  +    A+EQ HA A+A ATAAAA   V     
Sbjct: 60  TASPQTQSKVAASFSAGGGGGVAPVNDDVSASAAAEQRHAIAMAVATAAAAEAAVATAQA 119

Query: 112 -----RHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQA 166
                R +RP S++Y +E+YAA VIQT+FRGYLA+RALRALKGLVKLQALVRG NVR QA
Sbjct: 120 AVEVARLTRP-SNHYAKENYAAIVIQTAFRGYLAKRALRALKGLVKLQALVRGHNVRKQA 178

Query: 167 KLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNN 226
           K+TL+ +QALVR Q  V DQR R SHEGSR+S F++TN  W+S+ L DI  RKS+S    
Sbjct: 179 KMTLRCMQALVRVQARVLDQRLRLSHEGSRKSTFSDTNSLWESRYLQDIAERKSISRE-- 236

Query: 227 ASGTITIADWNDHPCTRQGI-------KEAVMKREKTLAYAFSNQVWRSRRNPSAGDERE 279
             G+    DW++ P T + +       KEA +KREK L+ A S Q+WR+ R+PS G+E E
Sbjct: 237 --GSSIADDWDERPHTIEEVKAMLQTRKEAALKREKNLSQALSQQIWRTGRSPSMGNEDE 294

Query: 280 LDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWP----------KYQNQKQ 329
           L+E+ KWLDRWMATK WE S  RASTD+RD I KTVE D S P            QNQ Q
Sbjct: 295 LEEKPKWLDRWMATKPWE-SRGRASTDQRDPI-KTVEIDTSQPYSYLAPNFRRSNQNQYQ 352

Query: 330 P---RPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSA 386
           P   + P S  +ASPLHRA  N+  HQSP +TPSP KT+P+QVRSASPR   +E  S   
Sbjct: 353 PNQFQRPNSHSVASPLHRAHQNVSHHQSP-ITPSPSKTRPLQVRSASPRCG-REDRSLHT 410

Query: 387 AQTPTL------NG-------------VAAATSTMPNYMAATESAKAKARSQSAPRQGAS 427
           +QTP+L      NG               +    +PNYMAATES KA+ RSQSAPRQ  S
Sbjct: 411 SQTPSLRSNYYYNGGLHQQGRGATTSGGGSGGPALPNYMAATESTKARVRSQSAPRQRPS 470

Query: 428 TSMLPRER------SGSVKKRLSYPAPEP--------HCCQNSRSSSFKSVPAGCGGYSS 473
           T    RER      SGS +KRLS+PAP+P            N RS SFKSV    GGY  
Sbjct: 471 TPE--RERGGPGSVSGSARKRLSFPAPDPYSGGIGYGGYGHNLRSPSFKSV---GGGY-L 524

Query: 474 GIEQLSNYSSCYAESYGGEISP 495
           G+EQ SNYSSC  +S GGEISP
Sbjct: 525 GLEQQSNYSSCCTDSLGGEISP 546

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522486|ref|XP_003529877.1| PREDICTED: uncharacterized protein LOC100786729 [Glycine max]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 286/557 (51%), Positives = 347/557 (62%), Gaps = 76/557 (13%)

Query: 1   MGKK-SGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRKADCT 59
           MGKK SG SW T VKRAFRSP+K D++KR+ RRRED  + E+EEKKREKRR +FRK   +
Sbjct: 1   MGKKGSGSSWLTAVKRAFRSPTK-DSDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMS 59

Query: 60  DDVLL------QRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAMEIVRH 113
            +         Q+ +  +AA S   +RT +     +A         A ATA AA+E+ R 
Sbjct: 60  HEGGNNNNNTQQKLKHDVAA-SGGGSRTDQDQKHAVAVAVA-TAEAAMATAQAAVEVARL 117

Query: 114 SRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRV 173
           S+PAS  + REHYAA VIQT+FRGYLARRALRALKGLVKLQALVRG NVR QAK+TL+ +
Sbjct: 118 SKPAS--HAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCM 175

Query: 174 QALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITI 233
           QALVR Q  V DQR R S EGSR+S F++T   WDS+ L DI  RKS+S      G+   
Sbjct: 176 QALVRVQARVLDQRIRSSLEGSRKSTFSDTASVWDSRYLQDISDRKSISRE----GSSIT 231

Query: 234 ADWNDHPCTRQGIK--------EAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDERTK 285
            DW++   T + +K         A MKR+KTL+ AFS Q+WR+ R  S G+E EL+ER K
Sbjct: 232 DDWDERHHTVEEVKAMLMQRKEAAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPK 291

Query: 286 WLDRWMATKQWENSATRASTDRRDHIMKTVETDA-------------SWPKYQNQKQPRP 332
           WLDRWMATK WEN   RASTD+RDHI KTVE D              S P YQ       
Sbjct: 292 WLDRWMATKPWENRG-RASTDQRDHI-KTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQ 349

Query: 333 PVSIGIASPLHRAQPN-LFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQTPT 391
           P    IASPLHR+  N    HQSPA TPSP K++PIQVRSASPR  +++  S+  +QTP+
Sbjct: 350 PQRHSIASPLHRSHQNGSSLHQSPA-TPSPAKSRPIQVRSASPRC-IRDDRSYHTSQTPS 407

Query: 392 L------------NG--------VAAATSTMPNYMAATESAKAKARSQSAPRQGASTSML 431
           L            NG           AT+T+PNYMAATESAKA+ RSQSAPRQ  ST   
Sbjct: 408 LRSNYHYAGNLYQNGRVVGTGTSNGGATATLPNYMAATESAKARIRSQSAPRQRPSTP-- 465

Query: 432 PRERSGSVKKRLSYPAPEPHCCQNS--------RSSSFKSVPAGCGGYSSGIEQLSNYSS 483
            R+R GS KKRLS+PAP+P+    S        RS SFKSV    G +  G+EQ SNYSS
Sbjct: 466 ERDRVGSAKKRLSFPAPDPYGVGVSYGNYGHSLRSPSFKSV---SGSHFGGLEQQSNYSS 522

Query: 484 CYAESY-GGEISPCPSG 499
           C  ES  GG++SP  +G
Sbjct: 523 CCTESIGGGQVSPSSTG 539

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559797|ref|XP_003548183.1| PREDICTED: uncharacterized protein LOC100799284 [Glycine max]

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 286/561 (50%), Positives = 347/561 (61%), Gaps = 80/561 (14%)

Query: 1   MGKK-SGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRKA--- 56
           MGKK SG SW T VKRAFRSP+K D++KR+ RRRED  + E+EEKKREKRR +FRK    
Sbjct: 1   MGKKGSGSSWLTAVKRAFRSPTK-DSDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMS 59

Query: 57  -----DCTDDVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAMEIV 111
                + ++    Q+ +  +AA S   +RT +     LA         A ATA AA E+ 
Sbjct: 60  HEGVNNNSNHTTQQKVQHDVAA-SGGGSRTDQDQKHALAVAM-ATAEAAMATAQAAAEVA 117

Query: 112 RHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLK 171
           R S+PAS  + REH+AA VIQT+FRGYLARRALRALKGLVKLQALVRG NVR QAK+TL+
Sbjct: 118 RLSKPAS--HAREHFAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLR 175

Query: 172 RVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTI 231
            +QALVR Q  V DQR R S EGSR+S F++T   WDS+ L DI  RKS+S      G+ 
Sbjct: 176 CMQALVRVQARVLDQRIRSSLEGSRKSTFSDTASVWDSRYLQDISDRKSISRE----GSS 231

Query: 232 TIADWNDHPCTRQGIK--------EAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDER 283
              DW++   + + +K         A MKR+KTL+ AFS Q+WR+ R  S G+E EL+ER
Sbjct: 232 IADDWDERHHSVEEVKAMLMQRKEAAAMKRDKTLSQAFSEQIWRNGRTSSIGNEDELEER 291

Query: 284 TKWLDRWMATKQWENSATRASTDRRDHIMKTVETDA-------------SWPKYQNQKQP 330
            KWLDRWMATK WEN   RASTD+RD I KTVE D              S P YQ     
Sbjct: 292 PKWLDRWMATKPWENRG-RASTDQRDPI-KTVEIDTSQPYSYLGTNYRRSHPNYQYNPNH 349

Query: 331 RPPVSIGIASPLHRAQPN-LFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQT 389
             P    IASPLHR+  N    HQSPA TPSP K++PIQVRSASPR  +++  S+  +QT
Sbjct: 350 HQPQRHSIASPLHRSHQNGSSLHQSPA-TPSPAKSRPIQVRSASPRC-VRDDRSYHTSQT 407

Query: 390 PTL------------NG--------VAAATSTMPNYMAATESAKAKARSQSAPRQGASTS 429
           P+L            NG           AT+T+PNYMAATESAKA+ RSQSAPRQ  ST 
Sbjct: 408 PSLRSNYHYTGNLYQNGRIVSTGTSSGGATATLPNYMAATESAKARIRSQSAPRQRPSTP 467

Query: 430 MLPRERSGSVKKRLSYPAPEPHCCQNS--------RSSSFKSVPAGCGGYSSGIEQLSNY 481
              R+R GS KKRLS+PAP+P+    S        RS SFKSV    G +  G+EQ SNY
Sbjct: 468 --ERDRVGSAKKRLSFPAPDPYGVGVSYGNYGHSLRSPSFKSV---SGSHFGGLEQQSNY 522

Query: 482 SSCYAESY---GGEISPCPSG 499
           SSCY ES    GGE+SP  +G
Sbjct: 523 SSCYTESIGGGGGEVSPSSTG 543

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742449|emb|CBI34598.3| unnamed protein product [Vitis vinifera]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 284/532 (53%), Positives = 332/532 (62%), Gaps = 108/532 (20%)

Query: 1   MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRK----A 56
           MGKK G SW T+VKRAFRSP K DNEK++SRRRE+    EEEE+KREKRR +FRK     
Sbjct: 1   MGKKGGSSWLTVVKRAFRSPIK-DNEKKSSRRREEHELEEEEEEKREKRRWIFRKPTTTT 59

Query: 57  DCTDDVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAME------- 109
             T+ V +Q CE K+  ISS       P NPIL +EQ HA A+AAATAAAA         
Sbjct: 60  TTTNHVQVQECETKM--ISSV------PTNPILVAEQRHAIAVAAATAAAAEAAVATAQA 111

Query: 110 ---IVRHSRPASSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQA 166
              IVR +RP+S  + REHYAA VIQT+FRGYLAR ALRALKGLVKLQALVRG NVR QA
Sbjct: 112 AVEIVRLTRPSS--FFREHYAAVVIQTAFRGYLARTALRALKGLVKLQALVRGHNVRKQA 169

Query: 167 KLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNN 226
           K+TLK +QALVR Q  VRDQR R SHEGSRRS+FAETN  W+S+ L +I+ RKSMS + +
Sbjct: 170 KMTLKCMQALVRVQSRVRDQRARLSHEGSRRSMFAETNSLWESRYLQEIRHRKSMSRDRS 229

Query: 227 ASGTITIADWNDHPCTR-----------QGIKEAVMKREKTLAYAFSNQVWRSRRNPSAG 275
                +IA   D  C R           +  KE  +KREK LAYAFS+QVWRS RNP AG
Sbjct: 230 -----SIA---DECCGRPHEIEEIEAMFRSRKEGALKREKALAYAFSHQVWRSGRNPFAG 281

Query: 276 DERELDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWPK------------ 323
           DE +L+ERTKWL RWMATK+WE S++RASTD+RD I KTVE D S P             
Sbjct: 282 DEEDLEERTKWLQRWMATKRWE-SSSRASTDKRDAI-KTVEIDTSRPYSYSASNVRRSSV 339

Query: 324 YQNQKQPRPPVSIGIASPLHRAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTS 383
           YQNQ   RPP     ASP H+A  NL  H SP +TPSP KT+P+QV              
Sbjct: 340 YQNQ-HLRPPTPHSTASPFHKAHHNLSLHLSP-VTPSPSKTRPLQV-------------- 383

Query: 384 FSAAQTPTLNGVAAATSTMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKKRL 443
                 P+ NG   A++ +PNYMAATESAKA+ RS+SAPRQ  ST    RER G +    
Sbjct: 384 ------PSTNG-DVASAVLPNYMAATESAKARVRSESAPRQKPSTP--ERERGGGM---- 430

Query: 444 SYPAPEPHCCQNSRSSSFKSVPAGCGGYSSGIEQLSNYSSCYAESYGGEISP 495
                     ++ RS SFKSV A             N SSCY +S GGEISP
Sbjct: 431 --------LSKSLRSPSFKSVHA-------------NLSSCYTDSLGGEISP 461

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478027|ref|XP_004155200.1| PREDICTED: protein IQ-DOMAIN 14-like [Cucumis sativus]

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 235/533 (44%), Positives = 292/533 (54%), Gaps = 113/533 (21%)

Query: 1   MGKKSGISWFTIVKRAFRSPSKNDNEKRNSRRREDEFELEEEEKKREKRRSLFRKADCTD 60
           MGKK G SW T VKRAFRSPSK                 +E+ KK EKRR  FR++    
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPSK-----------------DEDHKKTEKRRWGFRRSTNLH 43

Query: 61  DVLLQRCEAKIAAISSANTRTTKPMNPILASEQGHAYALAAATAAAAMEIVR---HSRPA 117
           D +  +               + P +    +        A  TA AA+++ R    +RP+
Sbjct: 44  DQVTHQTP-------------SNPSSDAALAAAVATAEAAMVTAQAAVQVARLTTSTRPS 90

Query: 118 SSYYVREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALV 177
           ++   R+HYAA +IQT+FRGYLARRALRALKGLVKLQALVRG NVR QAK+TL+ +QALV
Sbjct: 91  NN--ARDHYAAILIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALV 148

Query: 178 RAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWN 237
           R Q  V DQR R SHE S  S  ++ +    S+ L  +  R                   
Sbjct: 149 RVQARVLDQRMRLSHEESGNSTLSDPSTALGSRYLQYLSDR------------------- 189

Query: 238 DHPCTRQGIKEAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDERTKWLDRWMATKQWE 297
                    KE  MKR++ L    S Q+WR  R+PS G   +L+ER KWLD+W + K WE
Sbjct: 190 ---------KEFAMKRDRNL----SQQIWRRGRSPSMGSGDDLEERPKWLDQWNSRKAWE 236

Query: 298 NSATRASTDRRDHIMKTVETDASWP----------KYQNQKQPRPPVSIGIASPLHRAQP 347
            S  RASTD+RD I KTVE D   P            QN ++  P      +SPL+R Q 
Sbjct: 237 -SRGRASTDQRDPI-KTVEIDTFQPYTRTSSNFRRMAQNLQRTNPHSG---SSPLNRMQQ 291

Query: 348 NLF-FHQSPALTPSPRKTKP-IQVRSASPRSFLKEQTSFSAAQTPTL------------N 393
           N++ FH SPA TPSP KT+P +QVRSASPR F++E  S + +QTP+L             
Sbjct: 292 NVYSFHHSPA-TPSPSKTRPMLQVRSASPR-FVREDKSDNTSQTPSLRSNYYYSGNLVQQ 349

Query: 394 GVAAATST-------MPNYMAATESAKAKARSQSAPRQGASTSMLPRERS----GSVKKR 442
           G + A+S+       +PNYMAATESAKA+ RSQSAPRQ AST    RER     G  KKR
Sbjct: 350 GRSGASSSYGGDGNCLPNYMAATESAKARLRSQSAPRQRASTPEREREREKGGVGCAKKR 409

Query: 443 LSYPAPEPHCCQNSRSSSFKSVPAGCGGYSSGIEQLSNYSSCYAESYGGEISP 495
           LS+P  +P      RS SFKSV     G   G+EQ SNYSSC  ES GGEISP
Sbjct: 410 LSFPVADPIGHGVLRSPSFKSV----SGTYLGMEQQSNYSSCCTESLGGEISP 458

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	508
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.625	0.595	0.422	2.3e-60
TAIR|locus:2139187	423	IQD16 "AT4G10640" [Arabidopsis	0.523	0.628	0.419	4.6e-60
TAIR|locus:2200945	527	IQD18 "AT1G01110" [Arabidopsis	0.629	0.607	0.404	1.1e-58
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.667	0.735	0.298	7.7e-25
TAIR|locus:2082946	352	iqd15 "AT3G49380" [Arabidopsis	0.145	0.210	0.5	3.8e-24
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.614	0.75	0.306	6.1e-24
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.624	0.751	0.294	7.2e-19
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.588	0.695	0.275	4.3e-17
TAIR|locus:2182920	401	IQD24 "AT5G07240" [Arabidopsis	0.133	0.169	0.471	3.6e-14
TAIR|locus:2066226	527	Iqd4 "AT2G26410" [Arabidopsis	0.429	0.413	0.260	4.2e-14

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
 Identities = 147/348 (42%), Positives = 199/348 (57%)

Query:   119 SYYVREHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKLTLKRVQALVR 178
             +Y  RE YAA VIQT FRGY         KGLVKLQALVRG NVR QAK+TL+ +QALVR
Sbjct:   126 TYTAREDYAAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVR 185

Query:   179 AQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWND 238
              Q  V DQR R SH+GSR+S F++T    +S+ L +I  R+SMS      G+    DW+D
Sbjct:   186 VQSRVLDQRKRLSHDGSRKSAFSDTQSVLESRYLQEISDRRSMSRE----GSSIAEDWDD 241

Query:   239 HPCTRQGIK-------EAVMKREK--TLAYAFSNQVWRSRRNPSAGDERELDERTKWLDR 289
              P T + +K       +  ++RE   +++ AFS+QV R+R + S GDE E +ER KWLDR
Sbjct:   242 RPHTIEEVKAMLQQRRDNALRRESNNSISQAFSHQVRRTRGSYSTGDEYE-EERPKWLDR 300

Query:   290 WMATKQWENSATRASTDRR-DHIMKTVETDASWPKYQNQKQPR----PPVSIGIASPLHR 344
             WMA+K W+    RASTD+R   + KTVE D S P Y  +   R    P  S   +SP  R
Sbjct:   301 WMASKPWDK---RASTDQRVPPVYKTVEIDTSQP-YLTRGNSRTGASPSRSQRPSSP-SR 355

Query:   345 AQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFS-AAQTPTLNGVAAATSTMP 403
                +   H   + TPSP K++PIQ+RSASPR    ++++++  + TP+L    + T+   
Sbjct:   356 TSHHYQQHNFSSATPSPAKSRPIQIRSASPRIQRDDRSAYNYTSNTPSLRSNYSFTARS- 414

Query:   404 NYMAATESAKAKARSQSAPRQGAST-SMLPRERSGSV-KKRLSYPAPE 449
              Y   T +  A   + + P   A T S   R RS S  ++R S P  E
Sbjct:   415 GYSVCTTTTTAT--NAALPNYMAITESAKARIRSQSAPRQRPSTPEKE 460

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2139187 IQD16 "AT4G10640" [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 4.6e-60, Sum P(3) = 4.6e-60
 Identities = 125/298 (41%), Positives = 172/298 (57%)

Query:   109 EIVRHSRPASSYYVREHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKL 168
             EIV+ +  A+  ++R H+AA +IQT+FRGY         KG+VKLQALVRG NVR+QAKL
Sbjct:    86 EIVKLT--ATPGFIRRHWAAIIIQTAFRGYLSRRALRALKGIVKLQALVRGNNVRNQAKL 143

Query:   169 TLKRVQALVRAQDMV----RDQRTR---------FSHEGSRRSLFAETNDFWDSKN-LHD 214
             TL+ ++ALVR QD V    + QR+R         ++ E  R S+FAE+N FWD+K  L D
Sbjct:   144 TLRCIKALVRVQDQVLNHHQQQRSRVLLSPPSRNYNIEARRNSMFAESNGFWDTKTYLQD 203

Query:   215 IKSRKSMSSNNNASGTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVW-RSRRNPS 273
             I+SR+S+S + N       ++  +     Q   E  +KREK  A A SNQ+  RS RN S
Sbjct:   204 IRSRRSLSRDMNRCNNEFYSEETE--LILQKKLEIAIKREKAQALALSNQIRSRSSRNQS 261

Query:   274 AGDERELDERTKWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWPKYQNQKQPRPP 333
             AGD+REL ERT+WLDRWMATKQW+++ T  ST+ RD I KT+E  A    +  +  P  P
Sbjct:   262 AGDDRELLERTQWLDRWMATKQWDDTITN-STNVRDPI-KTLE--AVTTHHHQRSYPATP 317

Query:   334 VSIGIASPLHRAQPNLFFHQ-SPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQTP 390
                    P  RA  ++     SP +  SP   +P    SA+  +  K +T  +  + P
Sbjct:   318 -------PSCRASRSVMVRSASPRIPCSPSSMQP-NYMSATESAKAKARTQSTPRRRP 367

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2200945 IQD18 "AT1G01110" [Arabidopsis thaliana (taxid:3702)]

 Score = 531 (192.0 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
 Identities = 142/351 (40%), Positives = 195/351 (55%)

Query:   116 PASSYYVREHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKLTLKRVQA 175
             P   YY RE+YAA VIQTSFRGY         KGLVKLQALVRG NVR QAK+TL+ +QA
Sbjct:   112 PRRIYYARENYAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQA 171

Query:   176 LVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIAD 235
             LVR Q  V DQR R SH+GSR+S F++++  ++S+ L D+  R+SMS      G+    D
Sbjct:   172 LVRVQSRVLDQRKRLSHDGSRKSAFSDSHAVFESRYLQDLSDRQSMSRE----GSSAAED 227

Query:   236 WNDHPCTRQGIK-------EAVMKREKT-LAYAFSNQVWRSRRNPSAGDERELD---ERT 284
             W+D P T   +K       +  ++ +KT L+ AFS ++WR+  N S     E++   ER 
Sbjct:   228 WDDRPHTIDAVKVMLQRRRDTALRHDKTNLSQAFSQKMWRTVGNQSTEGHHEVELEEERP 287

Query:   285 KWLDRWMATKQWENSAT-RASTDRRDHIMKTVETDASWPKYQNQKQPRPPVSIGIASPLH 343
             KWLDRWMAT+ W+  A+ RAS D+R  + KTVE D S P Y       P      +SP  
Sbjct:   288 KWLDRWMATRPWDKRASSRASVDQRVSV-KTVEIDTSQP-YSRTGAGSPSRGQRPSSP-S 344

Query:   344 RAQPNLFFHQSPALTPSPRKTKPIQVRSASPRSFL-----KEQTSFS-AAQTPTLNGVAA 397
             R   +     + + TPSP K++PI +RSASPR        +++ ++S  + TP+L    +
Sbjct:   345 RTSHHYQSRNNFSATPSPAKSRPILIRSASPRCQRDPREDRDRAAYSYTSNTPSLRSNYS 404

Query:   398 ATSTMPNYMAATESAKAKARSQSAPRQGAST-SMLPRERSGSV-KKRLSYP 446
              T+     ++ T    A       P   AST S   R RS S  ++R S P
Sbjct:   405 FTARSGCSISTTMVNNASL----LPNYMASTESAKARIRSHSAPRQRPSTP 451

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
 Identities = 111/372 (29%), Positives = 165/372 (44%)

Query:   110 IVRHSRPAS-SYYVREHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKL 168
             +VR + P   +    E  AA +IQT FRGY         +GLV+L+ L+ G  V+ QA  
Sbjct:    99 VVRRATPTRFAGKSNEEAAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAAN 158

Query:   169 TLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNAS 228
             TLK +Q L R Q  +R +R R S E   R            K L    +++     N  +
Sbjct:   159 TLKCMQTLSRVQSQIRARRIRMSEENQARQ-----------KQLLQKHAKELAGLKNGDN 207

Query:   229 GTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQV-WRSRR---NPSAGDERELDERT 284
                +I              EA M+RE+ LAY++S+Q  W++     NP   D        
Sbjct:   208 WNDSIQSKEKVEANLLSKYEATMRRERALAYSYSHQQNWKNNSKSGNPMFMDPSNPTWGW 267

Query:   285 KWLDRWMATKQWENSATRASTDRRDH---IMKTVE-TDASWPKYQN-QKQPRPPVSIGIA 339
              WL+RWMA +  E+S    S    D+   +  ++   +A+    +N   QP  P S    
Sbjct:   268 SWLERWMAGRPLESSEKEQSNSNNDNAASVKGSINRNEAAKSLTRNGSTQPNTPSSAR-G 326

Query:   340 SPLHRAQPNLFFHQ-SPA-LTPSPRKTKPIQVRSASPRSFLKEQTS-FSAAQTPTLNGVA 396
             +P ++   N FF   +P+ L  S RK+      S S  S L E+    S A +   +  +
Sbjct:   327 TPRNK---NSFFSPPTPSRLNQSSRKSNDDD--SKSTISVLSERNRRHSIAGSSVRDDES 381

Query:   397 AATS-TMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKKRLSYPAPEPHCCQN 455
              A S  +P+YM  T+SA+A+ + QS P  G +          S KKRLSYP   P   + 
Sbjct:   382 LAGSPALPSYMVPTKSARARLKPQS-PLGGTTQENEGFTDKASAKKRLSYPT-SPALPKP 439

Query:   456 SRSSSFKSVPAG 467
              R S+   V +G
Sbjct:   440 RRFSAPPKVESG 451

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2082946 iqd15 "AT3G49380" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 3.8e-24, Sum P(4) = 3.8e-24
 Identities = 37/74 (50%), Positives = 49/74 (66%)

Query:   118 SSYYVREHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKLTLKRVQALV 177
             +S Y++ H AA +IQT+FRG          KG+VKLQALVRG NVR +  +TL+RVQALV
Sbjct:   103 TSVYLKRHVAAILIQTAFRGCLARTAVRALKGVVKLQALVRGHNVRRRTSITLQRVQALV 162

Query:   178 RAQDMVRDQRTRFS 191
             R Q +  D R + +
Sbjct:   163 RIQALALDHRKKLT 176

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 6.1e-24, P = 6.1e-24
 Identities = 109/356 (30%), Positives = 162/356 (45%)

Query:   111 VRHSRPASSYYVREHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKLTL 170
             V  + P     VRE +AA  IQT+FRG+         KG+V+LQALVRG+ VR QA +TL
Sbjct:    70 VLRAPPKDFKAVREEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTL 129

Query:   171 KRVQALVRAQDMVRDQRTRFSHEGSR-RSLFAETNDFWDSKNLHDIKSRKSMSSNNNASG 229
             + +QALVR Q  VR +R R + EG   + L  E      S  L +++         +  G
Sbjct:   130 RCMQALVRVQARVRARRVRMTVEGQAVQKLLDEHRT--KSDLLKEVEEGWC-----DRKG 182

Query:   230 TITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQVWRS------RRNPSAG--DERELD 281
             T+     +D     Q  +E   KRE+ LAYA + + WRS      + N S      +E D
Sbjct:   183 TV-----DDIKSKLQQRQEGAFKRERALAYALAQKQWRSTTSSNLKTNSSISYLKSQEFD 237

Query:   282 ERT---KWLDRWMATKQWENSATRASTDRRDHIMKTVETDASWPKYQNQKQPRPPVSIGI 338
             + +    WL+RWMA + WE   TR        +M TV+T A+ P   ++    P      
Sbjct:   238 KNSWGWSWLERWMAARPWE---TR--------LMDTVDTAATPPPLPHKHLKSPET---- 282

Query:   339 ASPLHRAQPNLFFHQSPALTPSPRKTKP-IQVRSASPRSFLKEQTSFSAAQTPTL--NGV 395
             A  +   + N+    S    P    + P  +   +S  S +   T+  + +T  +  N  
Sbjct:   283 ADVVQVRRNNVTTRVSAKPPPHMLSSSPGYEFNESSGSSSICTSTTPVSGKTGLVSDNSS 342

Query:   396 AAATSTMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKKRL-SYPAPEP 450
             + A    P+YM+ TES KAK R+    RQ        +  SG     L + P+ +P
Sbjct:   343 SQAKKHKPSYMSLTESTKAKRRTNRGLRQSMDEFQFMKN-SGMFTGELKTSPSSDP 397

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 7.2e-19, P = 7.2e-19
 Identities = 101/343 (29%), Positives = 151/343 (44%)

Query:   123 REHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDM 182
             RE+ AAT IQT++RG+         KGLV+LQALVRG  VR QA +TL+ +QALVR Q  
Sbjct:    86 RENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQAR 145

Query:   183 VRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWNDHPCT 242
             VR +R R + E     L +ET+     + L D ++R             ++         
Sbjct:   146 VRARRVRLALE-----LESETSQQTLQQQLAD-EARVREIEEGWCDSIGSVEQIQAKLLK 199

Query:   243 RQGIKEAVMKREKTLAYAFSNQVWRS-RRNPSAGDERELDERT---KWLDRWMATKQWEN 298
             RQ   EA  KRE+ +AYA ++Q W++  R  SA    + D+      WL+RWMA + WEN
Sbjct:   200 RQ---EAAAKRERAMAYALTHQ-WQAGTRLLSAHSGFQPDKNNWGWNWLERWMAVRPWEN 255

Query:   299 SATRASTDRRDHIM--KTVETDASWPKYQNQKQPRPPVSIGIASPLHRAQPNLFFHQSPA 356
                 ++  R D  +    +E   + PK Q +   + P +  + S +          QS  
Sbjct:   256 RFLDSNL-RDDAKLGENGMEQSENVPKTQIKSVSKMPNTSNLVSGVSSQMTGPC--QSDG 312

Query:   357 LTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQTPTLNGVAAATSTMPNYMAATESAKAKA 416
              + SP  +  I V S +     K+  +      P   G    + + P   +   +  +K 
Sbjct:   313 DSSSPGISSSIPVVSKAKSKPAKDDLAVEVNSRP---GAGPRSHSNPKERSREPNRSSKE 369

Query:   417 RSQSAPRQGAS--TSMLPRERSGSVKKRLSYPAPEPHCCQNSR 457
             R  S P  G S  +      R+G +    S    E    QN R
Sbjct:   370 RL-SLPNSGKSLGSQSTKANRAGKLTPA-SQKVVEEKSAQNQR 410

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
 Identities = 93/338 (27%), Positives = 156/338 (46%)

Query:   124 EHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMV 183
             E  AA  IQT+FRGY         +GLV+L++LV+G+ VR QA  TL+ +Q L R Q  +
Sbjct:   107 EEIAAIKIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARVQYQI 166

Query:   184 RDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWNDHPCTR 243
             R++R R S +  +++L   T       N    K       N N S T++      +   +
Sbjct:   167 RERRLRLSED--KQAL---TRQLQQKHN----KDFDKTGENWNDS-TLSREKVEANMLNK 216

Query:   244 QGIKEAVMKREKTLAYAFSNQ-VWRSRRNPSAGDERELDERT-----KWLDRWMATKQWE 297
             Q    A M+REK LAYAFS+Q  W++  +   G +  +D         WL+RWMA +  E
Sbjct:   217 Q---VATMRREKALAYAFSHQNTWKN--STKMGSQTFMDPNNPHWGWSWLERWMAARPNE 271

Query:   298 NSATRASTDRRDHIMKTVETDASW---PKYQN-QKQPRPPVSIGIASPLHRAQPNLFFHQ 353
             N +       +D   ++V + A     P+ +N   + + P S   +SP  R  P+     
Sbjct:   272 NHSLTPDNAEKDSSARSVASRAMSEMIPRGKNLSPRGKTPNSRRGSSPRVRQVPS---ED 328

Query:   354 SPALTPSPRKTKPIQVRSASPRSF--LKEQTSFSAAQTPTLNGVAAATST------MPNY 405
             S ++  S +  +P   R ++  S    ++  SF+++ + ++ G  A T          N 
Sbjct:   329 SNSIV-SFQSEQPCNRRHSTCGSIPSTRDDESFTSSFSQSVPGYMAPTQAAKARARFSNL 387

Query:   406 --MAATESAKAKARSQSAPRQGASTSMLPRERSGSVKK 441
               +++ ++AK +     +P+     S  P+  S   KK
Sbjct:   388 SPLSSEKTAKKRLSFSGSPKTVRRFSGPPKLESNVTKK 425

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2182920 IQD24 "AT5G07240" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
 Identities = 33/70 (47%), Positives = 42/70 (60%)

Query:   123 REHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDM 182
             +E+ AA  IQ++FRGY         K LVKLQALV+G  VR Q    L+R+Q LVR Q  
Sbjct:   104 QEYKAAMKIQSAFRGYLARRALRALKALVKLQALVKGHIVRKQTADMLRRMQTLVRLQ-- 161

Query:   183 VRDQRTRFSH 192
              R + +R SH
Sbjct:   162 ARARASRSSH 171

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2066226 Iqd4 "AT2G26410" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
 Identities = 62/238 (26%), Positives = 115/238 (48%)

Query:   109 EIVRHSRPASSYYV--REHYAATVIQTSFRGYXXXXXXXXXKGLVKLQALVRGQNVRHQA 166
             E++R + P++      +E  AA  IQ ++R Y         +G+ +L++L++G+ V+ Q 
Sbjct:   130 EVIRLTTPSTPQIEESKEETAAIKIQNAYRCYTARRTLRALRGMARLKSLLQGKYVKRQM 189

Query:   167 KLTLKRVQALVRAQDMVRDQRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNN 226
                L  +Q L R Q  ++++R R S E   R    +       +N  ++ +  +  S+N 
Sbjct:   190 NAMLSSMQTLTRLQTQIQERRNRLSAENKTRHRLIQQKGH-QKENHQNLVTAGNFDSSNK 248

Query:   227 ASGTITIADWNDHPCTRQGIKEAVMKREKTLAYAFSNQ-VWR-SRRNP--SAGDERELDE 282
             +   I     N         KEA ++RE+ LAYA+S+Q  WR S + P  +  D    D 
Sbjct:   249 SKEQIVARSVNR--------KEASVRRERALAYAYSHQQTWRNSSKLPHQTLMDTNTTDW 300

Query:   283 RTKWLDRWMATKQWE-----NSATRASTDRRDHIMKTVETDASWPKYQNQKQPRPPVS 335
                WL+RWMA++ W+     +  +  S+ +R++ +K+    +   K  +Q   + PV+
Sbjct:   301 GWSWLERWMASRPWDAESIDDQVSVKSSLKRENSIKSSPARSKTQKSASQSSIQWPVN 358

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	508
pfam13178	105	pfam13178, DUF4005, Protein of unknown function (D	8e-14

>gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005)

 Score = 67.2 bits (164), Expect = 8e-14
 Identities = 32/62 (51%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 399 TSTMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKKRLSYPAPEPHCCQNSRS 458
           + ++PNYMAATESAKAK RSQSAPRQ   T    RE   S  KRLS P        +S S
Sbjct: 34  SPSLPNYMAATESAKAKVRSQSAPRQRPETE--ERESGSSATKRLSLPVSSSSGGSSSSS 91

Query: 459 SS 460
             
Sbjct: 92  PR 93

This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	508
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	99.61
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.81
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.47
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.21
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.4
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	95.76
PTZ00014	821	myosin-A; Provisional	95.5
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	92.73
COG5022	1463	Myosin heavy chain [Cytoskeleton]	92.46
KOG2128	1401	consensus Ras GTPase-activating protein family - I	92.28
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	90.11
smart00015	26	IQ Short calmodulin-binding motif containing conse	86.81
PTZ00014	821	myosin-A; Provisional	85.26
KOG0520	975	consensus Uncharacterized conserved protein, conta	84.58

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=99.61  E-value=9.3e-16  Score=134.06  Aligned_cols=48  Identities=63%  Similarity=0.787  Sum_probs=41.6

Q ss_pred             CCCCcccchhhhhhhhccCCCCCCCCCCCCCCCCCCCCccccccccCCCC
Q 047872          401 TMPNYMAATESAKAKARSQSAPRQGASTSMLPRERSGSVKKRLSYPAPEP  450 (508)
Q Consensus       401 ~~PnYMA~TeSAKAK~RSqSapkqR~~tp~~er~~s~s~KKRLSfp~~~~  450 (508)
                      .+|||||+|||||||+|+||+||||++++  +......++||+|||+...
T Consensus        33 ~~PsYMa~TeSakAK~RsqSaPrqR~~~~--~~~~~~~~~kR~S~~~~~~   80 (102)
T PF13178_consen   33 SLPSYMAATESAKAKARSQSAPRQRPGTP--ERAEKQSSKKRLSLPGSSN   80 (102)
T ss_pred             CCCCccchhhhhhhhhhccCCcccCCCcc--ccccccccccccccCCCCC
Confidence            39999999999999999999999999887  5554567889999997653

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.81  E-value=1.9e-05  Score=50.51  Aligned_cols=21  Identities=48%  Similarity=0.805  Sum_probs=19.0

Q ss_pred             hHHHHHHHHHhhhhHHHHHHH
Q 047872          125 HYAATVIQTSFRGYLARRALR  145 (508)
Q Consensus       125 e~AAi~IQtafRGylARral~  145 (508)
                      +.|||.||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            368999999999999999875

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.47  E-value=0.00019  Score=82.62  Aligned_cols=66  Identities=32%  Similarity=0.388  Sum_probs=51.8

Q ss_pred             hhHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 047872          124 EHYAATVIQTSFRGYLARRALRALK-GLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHE  193 (508)
Q Consensus       124 ee~AAi~IQtafRGylARral~aLk-glVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~e  193 (508)
                      ...+++.||..||||+.|+.|..++ +++.+|+++||.++|+.   ++ ...|++.+|..+|++..|+.|.
T Consensus       672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~---~~-~~~aai~~q~~~r~~~~r~~y~  738 (862)
T KOG0160|consen  672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRE---TE-REAAAIGIQKECRSYLNRRRYR  738 (862)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHh---hH-HHHHHHHhHHHHHHHHHHHHHH
Confidence            4567888999999999999999555 88899999999999992   22 5666667777777766666654

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.21  E-value=0.00027  Score=47.26  Aligned_cols=22  Identities=45%  Similarity=0.748  Sum_probs=20.0

Q ss_pred             hhHHHHHHHHHhhhhHHHHHHH
Q 047872          124 EHYAATVIQTSFRGYLARRALR  145 (508)
Q Consensus       124 ee~AAi~IQtafRGylARral~  145 (508)
                      .+.||++||+.||||++|+.|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            5689999999999999999984

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.40  E-value=0.0024  Score=74.24  Aligned_cols=72  Identities=32%  Similarity=0.395  Sum_probs=59.1

Q ss_pred             hhHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHhhhchhhhhhHHHHH-------HHHHHHHHHHHHHHhhhhhhcccCC
Q 047872          124 EHYAATVIQTSFRGYLARRALRALK-GLVKLQALVRGQNVRHQAKLTL-------KRVQALVRAQDMVRDQRTRFSHEGS  195 (508)
Q Consensus       124 ee~AAi~IQtafRGylARral~aLk-glVrLQalvRG~~vRrqa~~tl-------r~~qA~v~iQs~vR~~r~R~~~eg~  195 (508)
                      ...||..||.-||||+.|+.+..++ =+|++||-|||+.||+++....       +-+.++-++|+-+|+++.|...|..
T Consensus       809 ~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~  888 (975)
T KOG0520|consen  809 DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQ  888 (975)
T ss_pred             chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhcc
Confidence            4578999999999999999999655 8999999999999999997322       3455667788888888887776643

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=95.76  E-value=0.024  Score=65.86  Aligned_cols=66  Identities=26%  Similarity=0.211  Sum_probs=56.7

Q ss_pred             hhhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 047872          122 VREHYAATVIQTSFRGYLARRALRALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRF  190 (508)
Q Consensus       122 ~~ee~AAi~IQtafRGylARral~aLkglVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~  190 (508)
                      ...-.+++.||+.+||+++|+........+.+|..+|+++.|+++   .....+++.+|+.+|+..+|.
T Consensus       693 ~~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y---~~~~~~~~~~qs~~r~~~~r~  758 (862)
T KOG0160|consen  693 LQLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRY---RALIPASITIQSGVRAMLARN  758 (862)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcc
Confidence            456689999999999999998222445788999999999999998   566788999999999999998

>PTZ00014 myosin-A; Provisional

Probab=95.50  E-value=0.015  Score=67.63  Aligned_cols=41  Identities=24%  Similarity=0.315  Sum_probs=34.9

Q ss_pred             HHHHHHHHHhhhhHHHHHHHH-HHHHHHHHHhhhchhhhhhH
Q 047872          126 YAATVIQTSFRGYLARRALRA-LKGLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       126 ~AAi~IQtafRGylARral~a-LkglVrLQalvRG~~vRrqa  166 (508)
                      ..++.||+++|||++|+.|.. +.++++||+.+||+++++..
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            368899999999999999884 55899999999999988763

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=92.73  E-value=0.085  Score=33.60  Aligned_cols=19  Identities=26%  Similarity=0.331  Sum_probs=15.9

Q ss_pred             HHHHHHHHhhhchhhhhhH
Q 047872          148 KGLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       148 kglVrLQalvRG~~vRrqa  166 (508)
                      +++|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            4678889999999998875

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=92.46  E-value=0.23  Score=60.30  Aligned_cols=66  Identities=26%  Similarity=0.305  Sum_probs=49.9

Q ss_pred             hhHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 047872          124 EHYAATVIQTSFRGYLARRALR-ALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRF  190 (508)
Q Consensus       124 ee~AAi~IQtafRGylARral~-aLkglVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~  190 (508)
                      -...|++||++|||++.||.+. +++.+..+|.+.+|-.+|+..... --..+.+.+|..++...-|.
T Consensus       744 ~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~r~  810 (1463)
T COG5022         744 LDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYE-LKWRLFIKLQPLLSLLGSRK  810 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccc-hHHHhHHHhhHHhHHHhhHH
Confidence            3578999999999999988887 888999999999999988665333 23455666777666655444

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=92.28  E-value=0.27  Score=59.42  Aligned_cols=71  Identities=25%  Similarity=0.270  Sum_probs=59.3

Q ss_pred             hhHHHHHHHHHhhhhHH---HHHHH--HHHHHHHHHHhhhchhhhhhHHHH----HHHHHHHHHHHHHHHhhhhhhcccC
Q 047872          124 EHYAATVIQTSFRGYLA---RRALR--ALKGLVKLQALVRGQNVRHQAKLT----LKRVQALVRAQDMVRDQRTRFSHEG  194 (508)
Q Consensus       124 ee~AAi~IQtafRGylA---Rral~--aLkglVrLQalvRG~~vRrqa~~t----lr~~qA~v~iQs~vR~~r~R~~~eg  194 (508)
                      ..-..+.||.+.|||+.   +..+.  .++-||++|++.||+++|+.+...    ..||...+.||+.+|.+..|..+..
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~  643 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKDYKL  643 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchHHHH
Confidence            56678999999999993   22222  778999999999999999998733    4699999999999999999988763

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=90.11  E-value=0.6  Score=53.54  Aligned_cols=58  Identities=21%  Similarity=0.307  Sum_probs=42.2

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHHH-HHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccC
Q 047872          126 YAATVIQTSFRGYLARRALRALKG-LVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEG  194 (508)
Q Consensus       126 ~AAi~IQtafRGylARral~aLkg-lVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~eg  194 (508)
                      .-|+.||.+|||+++|..|+.+|. ++.++ ..|.+.+|          ..+..||.++|+.+.++.|..
T Consensus       697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K~k----------s~v~el~~~~rg~k~~r~ygk  755 (1001)
T KOG0164|consen  697 SLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYKLK----------SYVQELQRRFRGAKQMRDYGK  755 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH----------HHHHHHHHHHHhhhhccccCC
Confidence            457999999999999999997774 44445 45533332          235578999999988887743

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=86.81  E-value=0.48  Score=31.56  Aligned_cols=19  Identities=26%  Similarity=0.324  Sum_probs=15.6

Q ss_pred             HHHHHHHHhhhchhhhhhH
Q 047872          148 KGLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       148 kglVrLQalvRG~~vRrqa  166 (508)
                      +.++.||+.+||+++|+++
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            4678888888888888876

Calmodulin-binding motif.

>PTZ00014 myosin-A; Provisional

Probab=85.26  E-value=1.5  Score=51.41  Aligned_cols=40  Identities=23%  Similarity=0.242  Sum_probs=34.7

Q ss_pred             HHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 047872          149 GLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFS  191 (508)
Q Consensus       149 glVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~  191 (508)
                      -++.||+.+||++.|+++   ++..++++.||+.+|++..++.
T Consensus       779 ~~~~iq~~~r~~~~r~~~---~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKV---RKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc
Confidence            456789999999999998   5558899999999999988764

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=84.58  E-value=1  Score=53.29  Aligned_cols=65  Identities=25%  Similarity=0.331  Sum_probs=47.2

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHH-HH----------HHHHHhhhchhhhhhH----------------------HHHHHH
Q 047872          126 YAATVIQTSFRGYLARRALRALK-GL----------VKLQALVRGQNVRHQA----------------------KLTLKR  172 (508)
Q Consensus       126 ~AAi~IQtafRGylARral~aLk-gl----------VrLQalvRG~~vRrqa----------------------~~tlr~  172 (508)
                      .=+|+||+++|||..|+.|+.|- ++          -++|+-.||...|.-.                      ..+.+-
T Consensus       834 ~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~  913 (975)
T KOG0520|consen  834 QPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERL  913 (975)
T ss_pred             CccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHH
Confidence            34799999999999999998332 21          1237778887765432                      234456


Q ss_pred             HHHHHHHHHHHHhhhhhh
Q 047872          173 VQALVRAQDMVRDQRTRF  190 (508)
Q Consensus       173 ~qA~v~iQs~vR~~r~R~  190 (508)
                      -+|+++||+.+|....|-
T Consensus       914 ~~A~~~VQsm~rs~~a~q  931 (975)
T KOG0520|consen  914 TRAVVRVQSMFRSPKAQQ  931 (975)
T ss_pred             HHHHHHHHHHhcCHHHHH
Confidence            689999999999888773

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	508
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	4e-07
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	4e-06
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	2e-04
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	6e-04

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 10/85 (11%)

Query: 106 AAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRA-LRALKGLVKLQALVRGQNVRH 164
           A +E +R  +           A   IQ + RG+L R+  +R  +  + +Q  VRG   R 
Sbjct: 757 AYLEKIRADKL--------RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARC 808

Query: 165 QAKLTLKRVQALVRAQDMVRDQRTR 189
            A   L+R +A +  Q   R    R
Sbjct: 809 YATF-LRRTRAAIIIQKFQRMYVVR 832

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 14/101 (13%)

Query: 105 AAAMEIVRHSRPASSYYVREHY-----AATVIQTSFRGYLARR---ALRALKGLVKLQAL 156
           AA + I +  R    + +R+ Y     AA  IQ   RG+ AR     LR  +  + +Q  
Sbjct: 769 AACIRIQKTIR---GWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKF 825

Query: 157 VRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEGSRR 197
            R   VR + +       AL   Q ++R    R  ++   R
Sbjct: 826 QRMYVVRKRYQCMRDATIAL---QALLRGYLVRNKYQMMLR 863

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 123 REHYAATVIQTSFRGYLARRA-LRALKGLVKLQALVRGQNVRHQAKLTLKRVQA 175
           +   A   IQ + RG+L R+  L   +  + +Q  VRG   R  AK  L+R +A
Sbjct: 3   KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKA 55

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 5e-05
 Identities = 63/380 (16%), Positives = 104/380 (27%), Gaps = 130/380 (34%)

Query: 36  EFELEEEEKKREKRRSLFRKA-----DCTD--DVL---LQRCEAK-IAAISSANTRTTKP 84
           +FE  E + + +   S+F  A     DC D  D+    L + E   I     A + T + 
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67

Query: 85  MNPILASEQGHAYALAAATA----------AAAMEIVRHSRPASSY-YVREHYAATVIQT 133
               L S+Q                         E  + S     Y   R+         
Sbjct: 68  FW-TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--Q 124

Query: 134 SFRGYLARRALRALKGLVKLQ-ALVRGQNVRHQAKLTL-------KRVQALVRAQDMVRD 185
            F  Y   R    L+  +KL+ AL     +R    + +       K   AL    D+   
Sbjct: 125 VFAKYNVSR----LQPYLKLRQAL---LELRPAKNVLIDGVLGSGKTWVAL----DVCLS 173

Query: 186 QRTRFSHEGSRRSLFAETNDFWDSKNLHDIKSRKSMSSNNNASGTITIADWNDHPCTRQG 245
            + +   +            FW                       + + +     C    
Sbjct: 174 YKVQCKMDF---------KIFW-----------------------LNLKN-----CNS-- 194

Query: 246 IKEAVMKREKTLAYAFSNQVWRSRRNPSAGDERELDERTKWLDRWMATKQWENS------ 299
             E V++  + L Y      W SR + S+  +  +      L R + +K +EN       
Sbjct: 195 -PETVLEMLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 300 ------------------ATRAS--TD----------RRDHIMKTVETD------ASWPK 323
                              TR    TD            DH   T+  D        +  
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 324 YQNQKQPRPPVSIGIASPLH 343
            + Q  PR  ++    +P  
Sbjct: 313 CRPQDLPREVLTT---NPRR 329

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 63/459 (13%), Positives = 117/459 (25%), Gaps = 129/459 (28%)

Query: 6   GISWFTIVKRAFRSP-----------SKNDNEKRNSRRREDEFELEEEEKKREKRRSLFR 54
            I W  +      SP            + D    +        +L     + E RR L  
Sbjct: 183 KIFWLNLKNC--NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240

Query: 55  K--ADC---TDDV----LLQ----RC-------EAKIAAISSANTRTTKPMNPILASEQG 94
           K   +C     +V            C         ++    SA T T   ++    +   
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-- 298

Query: 95  HAYALAAATAAAAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRALR------ALK 148
                   T      ++                   +    +  L R  L       ++ 
Sbjct: 299 --------TPDEVKSLL----------------LKYLDCRPQD-LPREVLTTNPRRLSII 333

Query: 149 GLVKLQALVRGQNVRHQAKLTLKRV-QALVRAQDMVRDQRTRFSHEGSRRSLFAETND-- 205
                  L    N +H     L  + ++ +   +   + R  F     R S+F  +    
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA-EYRKMFD----RLSVFPPSAHIP 388

Query: 206 ------FWDSKNLHDIKS------RKSMSSNNNASGTITIADWNDHPC----TRQGIKEA 249
                  W      D+        + S+        TI+I              +   E 
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI-----PSIYLELKVKLENEY 443

Query: 250 VMKREKTLAYAFSNQVWRSRRNPSAGD------------ERELDE-----RTKWLD-RWM 291
            + R     Y            P   D              E  E     R  +LD R++
Sbjct: 444 ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFL 503

Query: 292 ATK-QWENSATRASTDRRDHIMKTVETDASWPKYQNQKQPRPPVSIG-IASPLHRAQPNL 349
             K + +++A  AS    +    T++    +  Y     P+    +  I   L + + NL
Sbjct: 504 EQKIRHDSTAWNASGSILN----TLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL 559

Query: 350 FFHQSPALTPSPRKTKPIQVRSASPRSFLKEQTSFSAAQ 388
               S         T  +++   +    + E+      Q
Sbjct: 560 --ICSK-------YTDLLRIALMAEDEAIFEEA-HKQVQ 588

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 8/89 (8%), Positives = 25/89 (28%), Gaps = 11/89 (12%)

Query: 106 AAMEIVRHSRPASSYYVREHYAATVIQTSFRGYLARRA----LRALKGLVKLQALVRGQN 161
           A +E  R S         +           +    ++A          +  +Q+ +    
Sbjct: 748 AQLEEERASE------QTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHK 801

Query: 162 VRHQAKLTLKRVQALVRAQDMVRDQRTRF 190
              + +    + Q +   + +    +T+ 
Sbjct: 802 EYKKTE-KPPKGQEVSELEAIYNSLQTKL 829

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 41.6 bits (98), Expect = 6e-04
 Identities = 4/73 (5%), Positives = 19/73 (26%), Gaps = 3/73 (4%)

Query: 121 YVREHYAATVIQTSFRGYLARRALRAL---KGLVKLQALVRGQNVRHQAKLTLKRVQALV 177
                 +   +Q+    +   +        + + +L+A+      + +       V    
Sbjct: 783 SRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAG 842

Query: 178 RAQDMVRDQRTRF 190
              + +    +  
Sbjct: 843 LTPNEIDSTWSAL 855

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	508
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	98.96
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.64
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.59
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.56
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.95
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	97.88
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.84
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	97.1
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.69
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.69
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.66
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.66
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	96.38
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	96.08
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	94.72
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	93.3
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	91.32
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	89.3
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	83.65

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=98.96  E-value=9.1e-10  Score=85.17  Aligned_cols=53  Identities=30%  Similarity=0.439  Sum_probs=46.0

Q ss_pred             hhhHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHhhhchhhhhhHHHHHHHHHHH
Q 047872          123 REHYAATVIQTSFRGYLARRALRALK-GLVKLQALVRGQNVRHQAKLTLKRVQAL  176 (508)
Q Consensus       123 ~ee~AAi~IQtafRGylARral~aLk-glVrLQalvRG~~vRrqa~~tlr~~qA~  176 (508)
                      +.+.|||.||+.||||++|+.|..++ ++|.||+.+||+++|+.+ ..++...|+
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~~r~~~aA   56 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA-KFLRRTKAA   56 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCc
Confidence            56789999999999999999999777 999999999999999998 445555554

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.64  E-value=3e-08  Score=73.71  Aligned_cols=41  Identities=24%  Similarity=0.400  Sum_probs=35.9

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHH---HHHHHHHhhhchhhhhhH
Q 047872          126 YAATVIQTSFRGYLARRALRALK---GLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       126 ~AAi~IQtafRGylARral~aLk---glVrLQalvRG~~vRrqa  166 (508)
                      .|||.||+.+||||+|+.+..++   ++|.||+.+||+++|+.+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            58999999999999999998554   788899999999988875

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.59  E-value=5.6e-08  Score=112.65  Aligned_cols=72  Identities=29%  Similarity=0.378  Sum_probs=60.7

Q ss_pred             hhhhHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccC
Q 047872          122 VREHYAATVIQTSFRGYLARRALRALK-GLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHEG  194 (508)
Q Consensus       122 ~~ee~AAi~IQtafRGylARral~aLk-glVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~eg  194 (508)
                      .+++.||++||+.||||++|+.|..++ ++|.||+.+||+++|+++. .++...+++.||+.+|++.+|+.|..
T Consensus       813 lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~-~lr~~~aav~IQ~~~Rg~l~R~~y~~  885 (1080)
T 2dfs_A          813 LRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQ-MMLREHKSIIIQKHVRGWLARVHYHR  885 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTTHHHHHTTT
T ss_pred             cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999999555 8999999999999999984 45556788888888888888777643

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.56  E-value=8.6e-08  Score=111.10  Aligned_cols=68  Identities=28%  Similarity=0.382  Sum_probs=62.1

Q ss_pred             hHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 047872          125 HYAATVIQTSFRGYLARRALRALK-GLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHE  193 (508)
Q Consensus       125 e~AAi~IQtafRGylARral~aLk-glVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~e  193 (508)
                      ..||++||+.||||++|+.|+.++ +++.||+.+||+++|+++ ..++...|++.||+.+|++.+|+.|.
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~y~  836 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKRYQ  836 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHHHH
Confidence            579999999999999999999655 899999999999999998 55788999999999999999999874

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.95  E-value=3.4e-06  Score=58.41  Aligned_cols=24  Identities=42%  Similarity=0.537  Sum_probs=21.8

Q ss_pred             hhhhHHHHHHHHHhhhhHHHHHHH
Q 047872          122 VREHYAATVIQTSFRGYLARRALR  145 (508)
Q Consensus       122 ~~ee~AAi~IQtafRGylARral~  145 (508)
                      .+||.||+.||.|||+||.|+.+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~rr~~~   26 (31)
T 2l53_B            3 GSEEVSAMVIQRAFRRHLLQRSLK   26 (31)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc
Confidence            468999999999999999999865

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=97.88  E-value=1.5e-05  Score=58.92  Aligned_cols=44  Identities=18%  Similarity=0.188  Sum_probs=39.0

Q ss_pred             HHHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 047872          148 KGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSH  192 (508)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~  192 (508)
                      +++|.||+.+||.++|+++ ..++...|++.||+.+||+.+|+.|
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            5789999999999999998 5566778999999999999998754

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.84  E-value=4.3e-06  Score=56.21  Aligned_cols=23  Identities=35%  Similarity=0.603  Sum_probs=20.5

Q ss_pred             hhhhHHHHHHHHHhhhhHHHHHH
Q 047872          122 VREHYAATVIQTSFRGYLARRAL  144 (508)
Q Consensus       122 ~~ee~AAi~IQtafRGylARral  144 (508)
                      .+||.||+.||.|||+||.|+.+
T Consensus         3 k~Ee~aA~vIQrA~R~yl~~~~~   25 (27)
T 2kxw_B            3 KQEEVSAIVIQRAYRRYLLKQKV   25 (27)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhh
Confidence            46899999999999999998763

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=97.10  E-value=0.00051  Score=52.69  Aligned_cols=43  Identities=23%  Similarity=0.313  Sum_probs=37.8

Q ss_pred             HHHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 047872          148 KGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSHE  193 (508)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~e  193 (508)
                      ..+|.||+.+||+++|+.+   ++...+++.||+.+||+.+|+.+.
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~---~~~r~aai~IQ~~~Rg~~aR~~~~   48 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQARCYAK   48 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999998   444579999999999999998764

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.69  E-value=0.0021  Score=50.33  Aligned_cols=42  Identities=21%  Similarity=0.140  Sum_probs=21.2

Q ss_pred             HHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 047872          150 LVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFS  191 (508)
Q Consensus       150 lVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~  191 (508)
                      ++.|||.+||+++|+.+...+...+|+..||..+|++..++.
T Consensus         9 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~   50 (64)
T 1wdc_A            9 ISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN   50 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            344444444444444444444445555556666665555543

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.69  E-value=0.0022  Score=50.30  Aligned_cols=42  Identities=31%  Similarity=0.400  Sum_probs=36.4

Q ss_pred             hHHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHhhhchhhhhhH
Q 047872          125 HYAATVIQTSFRGYLARRALRAL----KGLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       125 e~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrqa  166 (508)
                      ...++.||+..||||+|+.|..+    .++..||.-+|+++.++.-
T Consensus         6 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w   51 (64)
T 1wdc_A            6 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW   51 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            46789999999999999999954    3788899999999998765

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.66  E-value=0.0019  Score=50.51  Aligned_cols=42  Identities=19%  Similarity=0.094  Sum_probs=24.6

Q ss_pred             HHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 047872          150 LVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFS  191 (508)
Q Consensus       150 lVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~  191 (508)
                      ++.|||.+||+++|+.+...+...+|+..||..+|++..++.
T Consensus         7 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~   48 (63)
T 2bl0_A            7 VKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKN   48 (63)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            444555555555555555555555666666666666666554

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.66  E-value=0.0016  Score=50.91  Aligned_cols=41  Identities=20%  Similarity=0.215  Sum_probs=35.7

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHhhhchhhhhhH
Q 047872          126 YAATVIQTSFRGYLARRALRAL----KGLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       126 ~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrqa  166 (508)
                      ..++.||+..||||+|+.|..+    .++..||.-+|+++.++.-
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w   49 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW   49 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            5689999999999999999954    4787899999999998864

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=96.38  E-value=0.0037  Score=71.00  Aligned_cols=42  Identities=31%  Similarity=0.400  Sum_probs=33.9

Q ss_pred             hHHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHhhhchhhhhhH
Q 047872          125 HYAATVIQTSFRGYLARRALRAL----KGLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       125 e~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrqa  166 (508)
                      ..+|+.||+++||||+|+.|+.+    .+++.||..+||+++||..
T Consensus       779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            45788999999999999998855    4778888888888887775

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=96.08  E-value=0.0053  Score=56.41  Aligned_cols=35  Identities=29%  Similarity=0.425  Sum_probs=31.6

Q ss_pred             hhhHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHHhh
Q 047872          123 REHYAATVIQTSFRGYLARRALR-ALKGLVKLQALV  157 (508)
Q Consensus       123 ~ee~AAi~IQtafRGylARral~-aLkglVrLQalv  157 (508)
                      -...|+|+||+..||||+|+.++ .+.|++++.+|.
T Consensus        43 yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           43 YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            46789999999999999999999 889999998875

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=94.72  E-value=0.028  Score=65.85  Aligned_cols=42  Identities=26%  Similarity=0.254  Sum_probs=37.2

Q ss_pred             hHHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHhhhchhhhhhH
Q 047872          125 HYAATVIQTSFRGYLARRALRAL----KGLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       125 e~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrqa  166 (508)
                      ..+|+.||+.+||||+|+.|..+    .+++.||..+||++.||..
T Consensus       792 ~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          792 TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            36789999999999999999855    4899999999999999874

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=93.30  E-value=0.1  Score=59.34  Aligned_cols=45  Identities=22%  Similarity=0.116  Sum_probs=40.1

Q ss_pred             HHHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 047872          148 KGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSH  192 (508)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~  192 (508)
                      +.++.||+.+||+++|+++...+....|++.||..+|++..|+.+
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            367889999999999999977767779999999999999999865

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=91.32  E-value=0.12  Score=48.29  Aligned_cols=25  Identities=40%  Similarity=0.537  Sum_probs=22.2

Q ss_pred             hhhhHHHHHHHHHhhhhHHHHHHHH
Q 047872          122 VREHYAATVIQTSFRGYLARRALRA  146 (508)
Q Consensus       122 ~~ee~AAi~IQtafRGylARral~a  146 (508)
                      ..|+.||+.||.|||.|+.|+.++.
T Consensus       127 ~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          127 KHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccc
Confidence            5689999999999999999988764

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=89.30  E-value=0.42  Score=56.01  Aligned_cols=45  Identities=18%  Similarity=0.155  Sum_probs=40.0

Q ss_pred             HHHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 047872          148 KGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSH  192 (508)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~  192 (508)
                      ..++.||+.+||+++|+.+...++...|++.||+.+|++..++.+
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            367889999999999999987777789999999999999988764

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=83.65  E-value=0.67  Score=52.51  Aligned_cols=24  Identities=29%  Similarity=0.513  Sum_probs=21.4

Q ss_pred             hHHHHHHHHHhhhhHHHHHHHHHH
Q 047872          125 HYAATVIQTSFRGYLARRALRALK  148 (508)
Q Consensus       125 e~AAi~IQtafRGylARral~aLk  148 (508)
                      ..+|+.||+++||||+|+.|+.++
T Consensus       768 ~~~~~~iQ~~~Rg~l~R~~~~~~r  791 (795)
T 1w7j_A          768 RAACIRIQKTIRGWLMRKKYMRMR  791 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            468999999999999999999776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	508
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	6e-04
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	0.001
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	0.001

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 40.1 bits (93), Expect = 6e-04
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 6/60 (10%)

Query: 125 HYAATVIQTSFRGYLARRALRAL----KGLVKLQALVRG-QNVRHQAKLTL-KRVQALVR 178
               T  Q   RG+L R   RA+    + +  +Q  VR   NV+H   + L  +++ L++
Sbjct: 735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWMKLFFKIKPLLK 794

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 11/61 (18%)

Query: 106 AAMEIVRHSRPASSYYVREHY--------AATVIQTSFRGYLARRALRALKGLVKLQALV 157
                    R    + +R  Y        +   IQ + R ++  +    +K   K++ L+
Sbjct: 737 IITATQARCR---GFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWMKLFFKIKPLL 793

Query: 158 R 158
           +
Sbjct: 794 K 794

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)

Query: 125 HYAATVIQTSFRGYLARRALRALK----GLVKLQALVRGQNVR 163
               ++ Q   RGYL R+A + L+    GL  +Q  +R   V 
Sbjct: 731 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 773

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	508
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.98
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.87
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	94.55
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	92.86
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	87.48

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.98  E-value=0.00033  Score=76.31  Aligned_cols=42  Identities=26%  Similarity=0.249  Sum_probs=36.6

Q ss_pred             hHHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHhhhchhhhhhH
Q 047872          125 HYAATVIQTSFRGYLARRALRAL----KGLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       125 e~AAi~IQtafRGylARral~aL----kglVrLQalvRG~~vRrqa  166 (508)
                      ..+||.||+.+|||++|+.|+.+    ++++.||+.+||+++||..
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            46899999999999999999744    3789999999999998886

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.87  E-value=0.00051  Score=74.77  Aligned_cols=42  Identities=31%  Similarity=0.429  Sum_probs=36.9

Q ss_pred             hHHHHHHHHHhhhhHHHHHHHHHH----HHHHHHHhhhchhhhhhH
Q 047872          125 HYAATVIQTSFRGYLARRALRALK----GLVKLQALVRGQNVRHQA  166 (508)
Q Consensus       125 e~AAi~IQtafRGylARral~aLk----glVrLQalvRG~~vRrqa  166 (508)
                      ..+|+.||+.||||++|+.|+.+|    +++.||..+||+++||.+
T Consensus       731 ~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         731 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            568999999999999999999766    678889999999888876

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=94.55  E-value=0.02  Score=61.88  Aligned_cols=47  Identities=19%  Similarity=0.097  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 047872          146 ALKGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSH  192 (508)
Q Consensus       146 aLkglVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~  192 (508)
                      ..+.++.||+.+||+++|+++...++...|++.||+.+|++..|+.|
T Consensus       734 l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         734 LAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            33467899999999999999987777788999999999999998876

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=92.86  E-value=0.067  Score=57.68  Aligned_cols=45  Identities=22%  Similarity=0.116  Sum_probs=38.6

Q ss_pred             HHHHHHHHhhhchhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 047872          148 KGLVKLQALVRGQNVRHQAKLTLKRVQALVRAQDMVRDQRTRFSH  192 (508)
Q Consensus       148 kglVrLQalvRG~~vRrqa~~tlr~~qA~v~iQs~vR~~r~R~~~  192 (508)
                      +.++.||+.+||+++|+++........+++.||+.+|++.+|+.|
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            367888999999999999965555566899999999999999876

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=87.48  E-value=0.16  Score=54.11  Aligned_cols=25  Identities=28%  Similarity=0.456  Sum_probs=20.7

Q ss_pred             hhHHHHHHHHHhhhhHHHHHHHHHH
Q 047872          124 EHYAATVIQTSFRGYLARRALRALK  148 (508)
Q Consensus       124 ee~AAi~IQtafRGylARral~aLk  148 (508)
                      ...+||+||+.+||||+||.|..+|
T Consensus       705 l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         705 LRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3468899999999999999887654