Citrus Sinensis ID: 047902

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720

GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDKEMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSSITTNIGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEINKLWKQLRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVPGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKLAQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTGDSPPAGKMFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASSAFTVS

ccEEEEEEEEEcccccccccccccccccccccccccEEEEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHccccccccEEEEcEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccccccHHHHccccHHHHccccccccccEEEEEEEEcccccEEEEEEEEEEccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEccEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHcccccEEEEccccccccccccccEEEEEEEEEEcEEEEEccccccHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEccccccccccccccEEEEEEEcccccccccccccEEEEEEEccccEEEEEccccccEEEEEEEEccccEEEEEEEEEccccccccEEEEEEEcccccccccccEEEEEEcccEEEc

ccEEEEEEEEcccccEEEEcccccccccccccHHHHHHHHEEEEEEccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcEEEccccccccHHHHHHccHHHHHHccccccccEEEEEEEEccccccEEEEEEEcccccccccccEEEccccHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEcccEEEEcccccccEEEcccccccEEEcccccccccccccccccccccHHHHHHHHHHccccHHHHHHcccccEEEEccccccccccccccEcEEEEEEcEEEEEEccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccEEEEEcHHHHHHHHHcccHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccccccccccccccccEEcccccccccccccccEEEEEEEEccccccccccccEEEEEEEccccEEEEEEcccccEEEEEEEccccEEEEEEEEEEccccccccEEEEEEEcccccccccEEEEEEcccccEEEc

gqylvgvgsydmtgpaagtnmmGYANLFQNTAGIHFRLRARTFIVaessngtrfafvNLDAGMASQLVTTKVLEKLKTRFgnlyteeniaisgihthagpggyLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHnnlkpgsifirkgdvenaginrspsayllnpaeerarypenvdKEMTLLKFVdaasgksigafnwyathgtsmsrdnllisgdnkgAAARFFEDwfssknesssITTNIGKLMEKSKtikatggqqcgkttsqgfkvrkndgslfVGAFcqsnvgdvtpnvlgafcidsgkpcdfnhsschgddqlcigrgpgypdeilstkiigERQFQKAVDLFNSatdqlsgkidyrHVYINFTNIEVVldgtgnntvktcpaalgpgfaagttdgpgvfgfqqgDTEINKLWKQLRDVLKkpsqyqeecqkpkavllssgemfepyawapavlpiQILRLGKLIIlsvpgefttMAGRRLREAVKDTLInngngefdndtHIVIAGLTNAYSQYIATFEEYAHQRYEAAstlygphtlPAYIQEFKKLAQAMAKgekttkgpsppdlssvqlslslnptgdsppagkmfgdikedinqpkdgsfnkgdrpsatfwsanprydlltEGTYAVVEMLQgkrwipvyddddfslYFKWslentsfhglatiewevptkaipgvyrlrhfgsskkavnstnhyftgassaftvs

GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDvenaginrspsayllnpaEERARYPENVDKEMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEdwfssknesssiTTNIGKLMEKSktikatggqqcgkttsqgfkvRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEINKLWKQLRDVLKKpsqyqeecqKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVPGEFTTMAGRRLREAVKDTLinngngefdndTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKLAQAMAKGEkttkgpsppDLSSVQLSLSLNPTGDSPPAGKMFGDIKEDINQPkdgsfnkgdrpsatfwsanprydLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGsskkavnstnhyftgassaftvs

***LVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGI******YLL************VDKEMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWF**************************************FKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEINKLWKQLRDVLK***********PKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVPGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKL****************************************************************TFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSK*AV***NHYF**********

GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDKEMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSSITTNIGKLMEKSK********************RKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDDQ**I****GYPDEILSTKIIGERQFQKAVDLFNSA****SGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEINKLWKQLRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVPGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKLAQAMA*************LSSVQLSLSLNPTGDSPPAGKMFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASSAFTVS

GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDKEMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSSITTNIGKLMEKSKT**************QGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEINKLWKQLRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVPGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKLAQ******************SVQLSLSLNPTGDSPPAGKMFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASSAFTVS

GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDKEMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSSITTNIGKLMEKSKTIKAT****CGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEINKLWKQLRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVPGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKLAQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTGDSPPAGKMFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASSAFTVS

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		720	2.2.26 [Sep-21-2011]
Q304B9		757	Neutral ceramidase OS=Ara	yes	no	0.963	0.916	0.615	0.0
Q0JL46		785	Neutral ceramidase OS=Ory	yes	no	0.987	0.905	0.582	0.0
Q55G11		718	Neutral ceramidase B OS=D	yes	no	0.923	0.926	0.429	1e-157
Q9NR71		780	Neutral ceramidase OS=Hom	yes	no	0.894	0.825	0.422	1e-151
Q9JHE3		756	Neutral ceramidase OS=Mus	yes	no	0.895	0.853	0.423	1e-150
Q54BK2		714	Neutral ceramidase A OS=D	no	no	0.926	0.934	0.415	1e-149
Q91XT9		761	Neutral ceramidase OS=Rat	yes	no	0.895	0.847	0.424	1e-148
Q5W7F1		743	Neutral ceramidase OS=Dan	yes	no	0.926	0.897	0.410	1e-148
Q29C43		704	Neutral ceramidase OS=Dro	yes	no	0.919	0.940	0.400	1e-145
Q9VA70		704	Neutral ceramidase OS=Dro	yes	no	0.919	0.940	0.393	1e-143

>sp\|Q304B9\|NCASE_ARATH Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=2 SV=1	Back alignment and function desciption

 Score =  901 bits (2329), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/717 (61%), Positives = 539/717 (75%), Gaps = 23/717 (3%)

Query: 3   YLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAG 62
           YL+GVGSYD+TGPAA  NMMGYAN  Q  +GIHFRLRAR FIVAE   G R  FVNLDA 
Sbjct: 26  YLIGVGSYDITGPAADVNMMGYANSDQIASGIHFRLRARAFIVAEP-QGNRVVFVNLDAC 84

Query: 63  MASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFD 122
           MASQ+VT KVLE+LK R+G LYTE+N+AISGIHTHAGPGGYLQY+ Y +TSLGFV+QSFD
Sbjct: 85  MASQIVTIKVLERLKARYGELYTEKNVAISGIHTHAGPGGYLQYVTYIVTSLGFVRQSFD 144

Query: 123 AIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDKEM 182
            +V+ I QSIVQAH +L+PGS F+ KGD+ +AG+NRSPS+YL NPA ER++Y  +VDKEM
Sbjct: 145 VVVNGIEQSIVQAHESLRPGSAFVNKGDLLDAGVNRSPSSYLNNPAAERSKYKYDVDKEM 204

Query: 183 TLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWF--------SS 234
           TL+KFVD+  G + G+FNW+ATHGTSMSR N LISGDNKGAAARF EDWF        SS
Sbjct: 205 TLVKFVDSQLGPT-GSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFENGQKNSVSS 263

Query: 235 KNESSSITT-------NIGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQ 287
           +N    ++T       N  +L++ + T K++ G    K+     +VR      FV AFCQ
Sbjct: 264 RNIPRRVSTIVSDFSRNRDRLLDIAATYKSSRGHSVDKSLDVKTRVRNGSKRKFVSAFCQ 323

Query: 288 SNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQK 347
           SN GDV+PN LG FCID+G PCDFNHS+C+G ++LC GRGPGYPDE  ST+IIGE+QF+ 
Sbjct: 324 SNCGDVSPNTLGTFCIDTGLPCDFNHSTCNGQNELCYGRGPGYPDEFESTRIIGEKQFKM 383

Query: 348 AVDLFNSATDQLSGKIDYRHVYINFTNIEVVLD--GTGNNTVKTCPAALGPGFAAGTTDG 405
           AV+LFN AT++L GKI Y+H Y++F+N++V +   G G+ TVKTCPAA+G GFAAGTTDG
Sbjct: 384 AVELFNKATEKLQGKIGYQHAYLDFSNLDVTVPKAGGGSETVKTCPAAMGFGFAAGTTDG 443

Query: 406 PGVFGFQQGDTEINKLWKQLRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPI 465
           PG F F+QGD + N  W+ +R+VL+ P   Q +CQKPK +LL +GEM EPY WAP++LPI
Sbjct: 444 PGAFDFKQGDDQGNVFWRLVRNVLRTPGPEQVQCQKPKPILLDTGEMKEPYDWAPSILPI 503

Query: 466 QILRLGKLIILSVPGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYI 525
           QILR+G+L+ILSVPGEFTTMAGRRLR+A+K  LI++   EF N+ H+VIAGLTN YSQYI
Sbjct: 504 QILRIGQLVILSVPGEFTTMAGRRLRDAIKSFLISSDPKEFSNNMHVVIAGLTNTYSQYI 563

Query: 526 ATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKLAQAMAKGEKTTKGPSPPDLSSVQLSLS 585
           ATFEEY  QRYE ASTLYG HTL AYIQEFKKLA A+  G    +GP PPDL   Q+SL 
Sbjct: 564 ATFEEYEVQRYEGASTLYGRHTLTAYIQEFKKLATALVNGLTLPRGPQPPDLLDKQISLL 623

Query: 586 LNPTGDSPPAGKMFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEML 645
                DS P G  FGD+K D+  P   +F +G + +ATFWS  PR DL+TEG++AVVE L
Sbjct: 624 SPVVVDSTPLGVKFGDVKADV--PPKSTFRRGQQVNATFWSGCPRNDLMTEGSFAVVETL 681

Query: 646 -QGKRWIPVYDDDDFSLYFKWSL-ENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSK 700
            +G +W PVYDDDDFSL FKWS     S    ATIEW VP  A+ GVYR+RH+G+SK
Sbjct: 682 REGGKWAPVYDDDDFSLKFKWSRPAKLSSESQATIEWRVPESAVAGVYRIRHYGASK 738

Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 3

>sp\|Q0JL46\|NCASE_ORYSJ Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1	Back alignment and function description

>sp\|Q55G11\|NCSEB_DICDI Neutral ceramidase B OS=Dictyostelium discoideum GN=dcd2B PE=3 SV=1	Back alignment and function description

>sp\|Q9NR71\|ASAH2_HUMAN Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2	Back alignment and function description

>sp\|Q9JHE3\|ASAH2_MOUSE Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1	Back alignment and function description

>sp\|Q54BK2\|NCSEA_DICDI Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1	Back alignment and function description

>sp\|Q91XT9\|ASAH2_RAT Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1	Back alignment and function description

>sp\|Q5W7F1\|ASAH2_DANRE Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1	Back alignment and function description

>sp\|Q29C43\|NCASE_DROPS Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1	Back alignment and function description

>sp\|Q9VA70\|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		720
255539140		750	ceramidase, putative [Ricinus communis]	0.995	0.956	0.804	0.0
225459820		752	PREDICTED: neutral ceramidase-like [Viti	0.997	0.954	0.773	0.0
302141682		751	unnamed protein product [Vitis vinifera]	0.997	0.956	0.774	0.0
356550895		746	PREDICTED: neutral ceramidase-like [Glyc	0.995	0.961	0.767	0.0
357462039		747	Neutral ceramidase [Medicago truncatula]	0.995	0.959	0.766	0.0
449453075		738	PREDICTED: neutral ceramidase-like [Cucu	0.995	0.971	0.761	0.0
449496635		778	PREDICTED: LOW QUALITY PROTEIN: neutral	0.988	0.915	0.602	0.0
449450776		778	PREDICTED: neutral ceramidase-like [Cucu	0.988	0.915	0.602	0.0
255558846		772	ceramidase, putative [Ricinus communis]	0.988	0.922	0.609	0.0
42569717		757	neutral ceramidase [Arabidopsis thaliana	0.963	0.916	0.615	0.0

>gi\|255539140\|ref\|XP_002510635.1\| ceramidase, putative [Ricinus communis] gi\|223551336\|gb\|EEF52822.1\| ceramidase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1222 bits (3162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/723 (80%), Positives = 642/723 (88%), Gaps = 6/723 (0%)

Query: 2   QYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDA 61
           ++L+GVGSYDMTGPAA  NMMGYANL QN AG+HFRLRARTFIVAES+ G RFAFVNLDA
Sbjct: 30  EHLIGVGSYDMTGPAAQANMMGYANLVQNAAGVHFRLRARTFIVAESAQGARFAFVNLDA 89

Query: 62  GMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSF 121
           GMASQLVT +VLE+LK RFGNLYT+EN+AISGIHTHAGPGGYLQYLIY +TSLGFVQQSF
Sbjct: 90  GMASQLVTIRVLERLKPRFGNLYTKENLAISGIHTHAGPGGYLQYLIYHVTSLGFVQQSF 149

Query: 122 DAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDKE 181
           DAIV+ IVQSI+QAH NLKPGSIFI  GDVE AGINRSPSAYLLNPAEERARYP NVDKE
Sbjct: 150 DAIVNGIVQSIIQAHQNLKPGSIFINTGDVETAGINRSPSAYLLNPAEERARYPANVDKE 209

Query: 182 MTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSSI 241
           MTLLKFVD+A+G SIGAF+WYATHGTSMSRDN LISGDNKGAAARFFEDWF+S N+  S 
Sbjct: 210 MTLLKFVDSATGISIGAFSWYATHGTSMSRDNKLISGDNKGAAARFFEDWFTSTNKPKSA 269

Query: 242 TTN---IGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVL 298
           ++N   I KL+EK++ I+ATGGQ CGKTTSQ FKVRKNDGS FVGAFCQSNVGDVTPNVL
Sbjct: 270 SSNSVDIDKLIEKAQKIRATGGQPCGKTTSQAFKVRKNDGSRFVGAFCQSNVGDVTPNVL 329

Query: 299 GAFCIDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQ 358
           GAFC DSGKPCDFNHSSCHGD +LC+GRGPGYPDEILSTKIIGERQF KAVDLF SA+++
Sbjct: 330 GAFCSDSGKPCDFNHSSCHGDVRLCLGRGPGYPDEILSTKIIGERQFDKAVDLFMSASEK 389

Query: 359 LSGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEI 418
           LSGKIDYRH+Y+NFT++EV L   G    KTCPAALGPGFAAGTTDGPG+FGF+QGDTEI
Sbjct: 390 LSGKIDYRHMYLNFTDLEVDLGEQGK--AKTCPAALGPGFAAGTTDGPGMFGFEQGDTEI 447

Query: 419 NKLWKQLRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSV 478
           N+LW+Q+RD LKKPSQYQE+CQKPK VLLS+GEMFEPYAWAPA+LPIQILRLGKLIILSV
Sbjct: 448 NELWRQVRDFLKKPSQYQEDCQKPKNVLLSTGEMFEPYAWAPAILPIQILRLGKLIILSV 507

Query: 479 PGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEA 538
           PGEFTTMAGRRLREAVK+TLI+NG GEFD++THIVIAGLTN YSQY+AT EEY  QRYEA
Sbjct: 508 PGEFTTMAGRRLREAVKETLISNGGGEFDDETHIVIAGLTNTYSQYVATIEEYGQQRYEA 567

Query: 539 ASTLYGPHTLPAYIQEFKKLAQAMAKGEKTTK-GPSPPDLSSVQLSLSLNPTGDSPPAGK 597
           ASTLYGPHTL AYIQEF +LA AMAKGE+  K    PPDLSS QL L L+P  DSPP G 
Sbjct: 568 ASTLYGPHTLSAYIQEFNRLATAMAKGEQLPKIDLLPPDLSSKQLRLLLDPWIDSPPKGI 627

Query: 598 MFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDD 657
            FGD+K+D+ QPK+GSF KGDRP+ATFWS NPR+DLLTEGT+AVVEMLQG+RWIPVYDDD
Sbjct: 628 KFGDMKQDVTQPKNGSFKKGDRPTATFWSGNPRFDLLTEGTFAVVEMLQGERWIPVYDDD 687

Query: 658 DFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASSAF 717
           DFSLYFKW L+N +   LA +EWEVP +AI GVYRLRHFGSSKK  NS   YFTGASSAF
Sbjct: 688 DFSLYFKWKLDNKTLSSLARVEWEVPNEAISGVYRLRHFGSSKKTNNSPVEYFTGASSAF 747

Query: 718 TVS 720
           TVS
Sbjct: 748 TVS 750

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225459820\|ref\|XP_002284820.1\| PREDICTED: neutral ceramidase-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|302141682\|emb\|CBI18885.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356550895\|ref\|XP_003543818.1\| PREDICTED: neutral ceramidase-like [Glycine max]	Back alignment and taxonomy information

>gi\|357462039\|ref\|XP_003601301.1\| Neutral ceramidase [Medicago truncatula] gi\|355490349\|gb\|AES71552.1\| Neutral ceramidase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449453075\|ref\|XP_004144284.1\| PREDICTED: neutral ceramidase-like [Cucumis sativus] gi\|449489410\|ref\|XP_004158303.1\| PREDICTED: neutral ceramidase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449496635\|ref\|XP_004160185.1\| PREDICTED: LOW QUALITY PROTEIN: neutral ceramidase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449450776\|ref\|XP_004143138.1\| PREDICTED: neutral ceramidase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|255558846\|ref\|XP_002520446.1\| ceramidase, putative [Ricinus communis] gi\|223540288\|gb\|EEF41859.1\| ceramidase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|42569717\|ref\|NP_181337.2\| neutral ceramidase [Arabidopsis thaliana] gi\|110810580\|sp\|Q304B9.1\|NCASE_ARATH RecName: Full=Neutral ceramidase; Short=N-CDase; Short=NCDase; AltName: Full=Acylsphingosine deacylase; AltName: Full=N-acylsphingosine amidohydrolase; Flags: Precursor gi\|330254383\|gb\|AEC09477.1\| neutral ceramidase [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		720
TAIR\|locus:2065685		792	AT2G38010 [Arabidopsis thalian	0.651	0.592	0.587	1.8e-240
TAIR\|locus:2025042		779	AT1G07380 [Arabidopsis thalian	0.651	0.602	0.547	7.9e-227
TAIR\|locus:2154598		733	AT5G58980 [Arabidopsis thalian	0.961	0.944	0.567	6.1e-213
DICTYBASE\|DDB_G0268374		718	dcd2B "neutral/alkaline nonlys	0.591	0.593	0.439	1.4e-150
UNIPROTKB\|F1NN67		779	ASAH2 "Uncharacterized protein	0.605	0.559	0.415	1.4e-146
UNIPROTKB\|E2QVL9		782	ASAH2 "Uncharacterized protein	0.579	0.533	0.430	2.3e-146
DICTYBASE\|DDB_G0293538		714	dcd2A "neutral/alkaline nonlys	0.594	0.599	0.424	2.3e-144
ZFIN\|ZDB-GENE-041112-1		743	asah2 "N-acylsphingosine amido	0.609	0.590	0.407	4.3e-143
RGD\|69410		761	Asah2 "N-acylsphingosine amido	0.577	0.546	0.437	1.8e-142
UNIPROTKB\|Q91XT9		761	Asah2 "Neutral ceramidase" [Ra	0.577	0.546	0.437	1.8e-142

TAIR\|locus:2065685 AT2G38010 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1468 (521.8 bits), Expect = 1.8e-240, Sum P(2) = 1.8e-240
 Identities = 281/478 (58%), Positives = 352/478 (73%)

Query:   247 KLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSG 306
             +L++ + T K++ G    K+     +VR      FV AFCQSN GDV+PN LG FCID+G
Sbjct:   318 RLLDIAATYKSSRGHSVDKSLDVKTRVRNGSKRKFVSAFCQSNCGDVSPNTLGTFCIDTG 377

Query:   307 KPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYR 366
              PCDFNHS+C+G ++LC GRGPGYPDE  ST+IIGE+QF+ AV+LFN AT++L GKI Y+
Sbjct:   378 LPCDFNHSTCNGQNELCYGRGPGYPDEFESTRIIGEKQFKMAVELFNKATEKLQGKIGYQ 437

Query:   367 HVYINFTNIEVVLD--GTGNNTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEINKLWKQ 424
             H Y++F+N++V +   G G+ TVKTCPAA+G GFAAGTTDGPG F F+QGD + N  W+ 
Sbjct:   438 HAYLDFSNLDVTVPKAGGGSETVKTCPAAMGFGFAAGTTDGPGAFDFKQGDDQGNVFWRL 497

Query:   425 LRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVPGEFTT 484
             +R+VL+ P   Q +CQKPK +LL +GEM EPY WAP++LPIQILR+G+L+ILSVPGEFTT
Sbjct:   498 VRNVLRTPGPEQVQCQKPKPILLDTGEMKEPYDWAPSILPIQILRIGQLVILSVPGEFTT 557

Query:   485 MAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYG 544
             MAGRRLR+A+K  LI++   EF N+ H+VIAGLTN YSQYIATFEEY  QRYE ASTLYG
Sbjct:   558 MAGRRLRDAIKSFLISSDPKEFSNNMHVVIAGLTNTYSQYIATFEEYEVQRYEGASTLYG 617

Query:   545 PHTLPAYIQEFKKLAQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTG-DSPPAGKMFGDIK 603
              HTL AYIQEFKKLA A+  G    +GP PPDL   Q+SL L+P   DS P G  FGD+K
Sbjct:   618 RHTLTAYIQEFKKLATALVNGLTLPRGPQPPDLLDKQISL-LSPVVVDSTPLGVKFGDVK 676

Query:   604 EDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEML-QGKRWIPVYDDDDFSLY 662
              D+  P   +F +G + +ATFWS  PR DL+TEG++AVVE L +G +W PVYDDDDFSL 
Sbjct:   677 ADV--PPKSTFRRGQQVNATFWSGCPRNDLMTEGSFAVVETLREGGKWAPVYDDDDFSLK 734

Query:   663 FKWSLE-NTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASSAFTV 719
             FKWS     S    ATIEW VP  A+ GVYR+RH+G+SK    S +  F+G+SSAF V
Sbjct:   735 FKWSRPAKLSSESQATIEWRVPESAVAGVYRIRHYGASKSLFGSISS-FSGSSSAFVV 791

GO:0005576 "extracellular region" evidence=ISM

GO:0017040 "ceramidase activity" evidence=ISS

GO:0009506 "plasmodesma" evidence=IDA

TAIR\|locus:2025042 AT1G07380 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2154598 AT5G58980 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0268374 dcd2B "neutral/alkaline nonlysosomal ceramidase family protein" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NN67 ASAH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|E2QVL9 ASAH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0293538 dcd2A "neutral/alkaline nonlysosomal ceramidase family protein" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-041112-1 asah2 "N-acylsphingosine amidohydrolase 2" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

RGD\|69410 Asah2 "N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q91XT9 Asah2 "Neutral ceramidase" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0JL46	NCASE_ORYSJ	3, ., 5, ., 1, ., 2, 3	0.5826	0.9875	0.9057	yes	no
Q55G11	NCSEB_DICDI	3, ., 5, ., 1, ., 2, 3	0.4295	0.9236	0.9261	yes	no
Q9NR71	ASAH2_HUMAN	3, ., 5, ., 1, ., 2, 3	0.4225	0.8944	0.8256	yes	no
O06769	NCASE_MYCTU	3, ., 5, ., 1, ., 2, 3	0.3217	0.8708	0.9843	yes	no
Q91XT9	ASAH2_RAT	3, ., 5, ., 1, ., 2, 3	0.4245	0.8958	0.8475	yes	no
Q9I596	NCASE_PSEAE	3, ., 5, ., 1, ., 2, 3	0.3559	0.8777	0.9432	yes	no
Q29C43	NCASE_DROPS	3, ., 5, ., 1, ., 2, 3	0.4002	0.9194	0.9403	yes	no
Q9VA70	NCASE_DROME	3, ., 5, ., 1, ., 2, 3	0.3934	0.9194	0.9403	yes	no
Q304B9	NCASE_ARATH	3, ., 5, ., 1, ., 2, 3	0.6150	0.9638	0.9167	yes	no
Q5W7F1	ASAH2_DANRE	3, ., 5, ., 1, ., 2, 3	0.4107	0.9263	0.8977	yes	no
Q9JHE3	ASAH2_MOUSE	3, ., 5, ., 1, ., 2, 3	0.4231	0.8958	0.8531	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.1	0.963
3rd Layer	3.5.1.23	0.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		720
pfam04734		672	pfam04734, Ceramidase_alk, Neutral/alkaline non-ly	0.0
PTZ00487		715	PTZ00487, PTZ00487, ceramidase; Provisional	0.0

>gnl\|CDD\|218235 pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase	Back alignment and domain information

 Score =  969 bits (2508), Expect = 0.0
 Identities = 377/722 (52%), Positives = 458/722 (63%), Gaps = 56/722 (7%)

Query: 3   YLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAG 62
           YL+GVG  D+TGPAA   MMGYANL Q   GIH RL +R FIVA+  NG R  FV  D G
Sbjct: 2   YLIGVGIADITGPAAEIGMMGYANLDQVGTGIHQRLYSRAFIVADEPNGKRVVFVVADLG 61

Query: 63  MASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFD 122
           M  Q V   VLE+LK ++G+LYTE+N+A+SG HTH+GPGGY  YL+Y ITSLGF +QSF 
Sbjct: 62  MIFQAVRLGVLERLKAKYGDLYTEQNVALSGTHTHSGPGGYSHYLLYQITSLGFDKQSFQ 121

Query: 123 AIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDKEM 182
           AIV  IV SIV+AH +L+PG + + KG++ +A INRSPSAYL NP EERARYP+NVDK M
Sbjct: 122 AIVDGIVLSIVRAHESLQPGRLSVGKGELLDANINRSPSAYLANPEEERARYPDNVDKTM 181

Query: 183 TLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSSIT 242
           TLLKFV +  GK +GA NW+A HGTSM+  N LISGDNKG AA  FE             
Sbjct: 182 TLLKFVRS-DGKPVGAINWFAVHGTSMNNTNTLISGDNKGYAAYLFEKAV---------- 230

Query: 243 TNIGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFC 302
                           GG   G                FV AF QSNVGDV+PNVLGA+C
Sbjct: 231 ----------------GGDLPGAGG-------------FVAAFAQSNVGDVSPNVLGAWC 261

Query: 303 IDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGK 362
            D   PC FN S+C G  + C GRGPG  DE  ST+IIG RQF  A +L+++A+++++G 
Sbjct: 262 EDGSGPCCFNSSTCGGKSEACHGRGPG-DDEFESTRIIGRRQFAAAKELYDNASEEVTGP 320

Query: 363 IDYRHVYINFTNIEVVLDGTGN-NTVKTCPAALGPGFAAGTTDGPGVFGFQQGDTEI--N 419
           +D RH Y++ +N  V    TG+  TV+TCPAALG  FAAGTTDGPG F F QGDT    N
Sbjct: 321 VDSRHQYVDMSNYTVTPPFTGDGETVRTCPAALGYSFAAGTTDGPGAFDFTQGDTGATGN 380

Query: 420 KLWKQLRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVP 479
            LW  +RD+L  P+Q Q+ CQ PK +LL +GEM  PY W P ++P+Q+LR+G+L I++VP
Sbjct: 381 PLWDAVRDLLAVPTQEQKACQAPKPILLDTGEMTFPYPWVPNIVPVQLLRIGQLAIVAVP 440

Query: 480 GEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAA 539
           GEFTTMAGRRLREAV   L     G      H+VIAGL NAY+ Y+ T EEYA QRYE A
Sbjct: 441 GEFTTMAGRRLREAVAAAL-----GAAGIKPHVVIAGLANAYAHYVTTPEEYAIQRYEGA 495

Query: 540 STLYGPHTLPAYIQEFKKLAQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTGDSPPAGKMF 599
           STL+GPHTL AYIQEF +LA A+A G     GPSPPD +  QLSL      D  P GK F
Sbjct: 496 STLFGPHTLAAYIQEFLRLAPALADGAPVPPGPSPPDNTDKQLSLITGVVFDGKPIGKSF 555

Query: 600 GDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQ-GKRWIPVYDDDD 658
           GD+    N     S+ +G+  S TF  ANPR +L TEGT+  VE L+ G  W+ V  D D
Sbjct: 556 GDVLTQPNP----SYRRGETVSVTFVGANPRNNLRTEGTFLAVERLEAGGTWVTVATDAD 611

Query: 659 FSLYFKWSLENT-SFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASSAF 717
           +   F+W    T       TIEWE+P    PG YR+RHFG  K  +      F G S AF
Sbjct: 612 WETRFRWKRTGTLLGTSEVTIEWEIPDDTPPGTYRIRHFGDWKSGLGGKKP-FEGTSRAF 670

Query: 718 TV 719
           TV
Sbjct: 671 TV 672

This family represents a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes. Length = 672

>gnl\|CDD\|240437 PTZ00487, PTZ00487, ceramidase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		720
KOG2232		734	consensus Ceramidases [Signal transduction mechani	100.0
PTZ00487		715	ceramidase; Provisional	100.0
PF04734		674	Ceramidase_alk: Neutral/alkaline non-lysosomal cer	100.0
COG3356		578	Predicted membrane protein [Function unknown]	97.28
PF09843		179	DUF2070: Predicted membrane protein (DUF2070); Int	97.06
PF01835		99	A2M_N: MG2 domain; InterPro: IPR002890 The protein	94.19

>KOG2232 consensus Ceramidases [Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=4.8e-201  Score=1589.48  Aligned_cols=691  Identities=59%  Similarity=1.012  Sum_probs=668.6

Q ss_pred             CceEEEEEEEeccCCCCccccccccCCCCccceeecceEEEEEEEEeCCCCCEEEEEEeccccccHHHHHHHHHHHHHHh
Q 047902            1 GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRF   80 (720)
Q Consensus         1 ~~~~vG~a~~DITgP~~~v~m~GYa~~~~~a~Gihd~L~ARA~vl~~~~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~   80 (720)
                      ++|+||+|++|||||+++|+||||++..|.+.|||.||+|||||++++ .++|++||++|.+|+++.++.+|.+||+++|
T Consensus        30 s~Y~iGvG~~DiTGp~advNmMGYan~~QvasGIh~Rl~aRaFIvaep-~gnRv~FVs~DagM~sq~lkleVi~RLqarY  108 (734)
T KOG2232|consen   30 SQYLIGVGSYDITGPAADVNMMGYANSEQVASGIHFRLRARAFIVAEP-QGNRVAFVSLDAGMASQGLKLEVIERLQARY  108 (734)
T ss_pred             cceEeecccccccCChhheeeccccchhhhhchheeeeeeeeEEEecC-CCceEEEEecchhhhhhhhHHHHHHHHHHhh
Confidence            469999999999999999999999999999999999999999999997 6899999999999999999999999999999


Q ss_pred             CCCCCCCcEEEEeeecCCCCCcCchhhhccccccccchHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEecCccccCCh
Q 047902           81 GNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSP  160 (720)
Q Consensus        81 G~~i~~~nViisaTHTHSgP~g~~~~~~~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~Pa~l~~g~g~~~~~~~NRs~  160 (720)
                      |++|.++||+||+||||+||+||++|++|.++++||.++.|+.+|++|.++|.+||+||+|++|.+++|++.++++||||
T Consensus       109 G~lY~~~NVaiSGtHTHagPgGylqy~~y~vtslGFv~QsF~~mv~Gi~~sI~qAhenlrpG~iflnkg~llda~vNRSP  188 (734)
T KOG2232|consen  109 GNLYTEDNVAISGTHTHAGPGGYLQYVLYIVTSLGFVRQSFDVMVDGIEQSIIQAHENLRPGSIFLNKGELLDAGVNRSP  188 (734)
T ss_pred             cccccccceeEecccccCCCcceeeeeeeeehhcccchHHHHHHHHHHHHHHHHHHhcCCCCeEEecccceecccccCCh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCHhhhhcCCCCCCCeeEEEEEEECCCCceEE---EEEeeeecccccC---CCCcccc---CChHhHHHHHHHHH
Q 047902          161 SAYLLNPAEERARYPENVDKEMTLLKFVDAASGKSIG---AFNWYATHGTSMS---RDNLLIS---GDNKGAAARFFEDW  231 (720)
Q Consensus       161 ~ay~~NP~~er~~~~~~vD~~~~vL~f~~~~dG~~ia---~L~~yA~HpTsl~---~~n~lIS---~D~~G~a~~~lE~~  231 (720)
                      ++|++||++||++|+.++|++|++|||.+. .+.++|   +..||++|+++|+   +.|+++|   +||.||++++||++
T Consensus       189 ssYL~NPa~ERsky~~d~DKemtllkfVD~-q~~~~Gar~m~dWf~~h~~~~n~~~n~~r~Vss~isd~~~~a~~Lle~~  267 (734)
T KOG2232|consen  189 SSYLNNPAEERSKYEYDVDKEMTLLKFVDL-QWGPLGARFMEDWFEVHNGSMNSSRNSPRRVSSIISDNVGYASLLLEKA  267 (734)
T ss_pred             hHHhcChHhhhhcCccccCceeEEEEEEec-cCCccchHHHHHHHHhcccccccccCCcceecccccccccHHHHHHHHh
Confidence            999999999999999999999999999998 677999   5999999999999   8999999   99999999999987


Q ss_pred             hcCCCCCCcchhcchhhhhhhhhhhccCCCccCcccccccccccCCCCceEEEEEcccccCCCcCCCCcccccCCCCCCC
Q 047902          232 FSSKNESSSITTNIGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDF  311 (720)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaF~qg~~GDvsPn~~g~~~~d~g~~c~~  311 (720)
                      .+                     ....+|.++++.++.++..+..+++.||+||||+|+||||||++|++|.|||+||||
T Consensus       268 ~~---------------------~~~~pG~~v~~~~~~~~rvr~~~k~~FVsAFcqsN~GDVSPNilG~~CidtG~~Cd~  326 (734)
T KOG2232|consen  268 SN---------------------PNSMPGKSVTRSSSVARRVRNADKGKFVSAFCQSNCGDVSPNILGPFCIDTGLPCDF  326 (734)
T ss_pred             hC---------------------cccCCCcccccchhhhhhhhcccccchhhhhhhccCCCCCcccccchhhcCCCcccc
Confidence            53                     468899999999999998888889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccccCCCCcchhhHHHHHHHHHHHHHHHHHhhccccccCCceeEEEEeeeeeeEeecCCC--CCccccc
Q 047902          312 NHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYRHVYINFTNIEVVLDGT--GNNTVKT  389 (720)
Q Consensus       312 ~~s~c~~~~~~~~~~GP~~~d~~~~~~~iG~~~~~~A~~l~~~~~~~l~g~v~~~~~~vd~~~~~v~~p~~--~~~~~~t  389 (720)
                      .||||+|++++|.++||+++||||+++|||+||++.|++||++++++++|+|+++|+||||+++.|.+|..  ..+.++|
T Consensus       327 ~~StC~g~~~~C~~rGPG~pD~FeSTrIiGer~~k~A~eLfnkaSeevqG~v~~~H~~vD~s~l~vt~n~~~~~se~vkt  406 (734)
T KOG2232|consen  327 NHSTCPGGNEMCYGRGPGYPDEFESTRIIGERQFKMALELFNKASEEVQGKVDYRHQYVDFSNLNVTLNKLSGKSEVVKT  406 (734)
T ss_pred             ccCcCCCCCcceeccCCCCcchhhhhhHHhHHHHHHHHHHHHhhHHHhcCcccceeEeeccccceeEecCcCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999998754  5578999


Q ss_pred             cccccCccccccccCCCCccccccCcccchhhHHHhhhhhcCCchhhhhhcCCccEEecCCCCCCCCcCCCceeeEEEEE
Q 047902          390 CPAALGPGFAAGTTDGPGVFGFQQGDTEINKLWKQLRDVLKKPSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILR  469 (720)
Q Consensus       390 c~~a~G~sfaaGt~DG~g~~~f~qg~~~~~p~w~~~~~~~~~p~~~~~~cq~pKpill~~G~~~~p~~~~p~~~~vqilr  469 (720)
                      ||||||++|||||+||||+|+|+||++.+||||+++|++|+.|++|+.+||+||||||+||+|++||+|+|.||++||||
T Consensus       407 C~~AmGf~FAAGTtDGpGafdF~QG~~~gnpfW~~VRn~l~~P~~e~i~Ch~PKPILL~TGemt~PydW~P~Iv~~Qilr  486 (734)
T KOG2232|consen  407 CPAAMGFSFAAGTTDGPGAFDFTQGDDQGNPFWRLVRNVLKTPTEEQIKCHKPKPILLDTGEMTKPYDWAPSIVSVQILR  486 (734)
T ss_pred             CcccccccccccccCCCCccccccCCcCCChHHHHHHHHHcCCCHHHhcccCCCceEecccccCCCcCCCccccchheee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ECCEEEEecCCchhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEeecccccCCCCChhhhccceeeceecccCCCcHH
Q 047902          470 LGKLIILSVPGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLP  549 (720)
Q Consensus       470 iG~l~iv~vPgE~tt~~G~rlr~~v~~~~~~~~~~~~~~~~~vvv~G~aNgy~gYitT~EeY~~q~YEg~sT~~Gp~tl~  549 (720)
                      ||+|+|++||||||||+|||||++|++++++.|+   ..+.+|+|+||+|.|++||+|+|||+.|||||+||+||||||.
T Consensus       487 iGql~I~aVPgEFTTMaGRRLR~avka~~~~~g~---~~~~~VVIaGLtN~YsqYi~T~EEYqvQRYE~ASTlyGpHtlS  563 (734)
T KOG2232|consen  487 IGQLVILAVPGEFTTMAGRRLRDAVKAALKSSGN---SINMHVVIAGLTNIYSQYITTFEEYQVQRYEGASTLYGPHTLS  563 (734)
T ss_pred             eccEEEEecCccceehhhHHHHHHHHHHHHhcCC---CcceEEEEeccccchhhhcccHHHHhHHHhhccccccCcchhh
Confidence            9999999999999999999999999999988764   2478999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCCCcccccccccCCCCCCCCCCCccccceeecccCCCCCccCCCCceEEEEEcccC
Q 047902          550 AYIQEFKKLAQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTGDSPPAGKMFGDIKEDINQPKDGSFNKGDRPSATFWSANP  629 (720)
Q Consensus       550 a~~~~~~~L~~~l~~~~~~~~gp~p~~~~~~~~~~~~~v~~d~~p~g~~fGdv~~~~~~~~~~~y~~g~~v~~~F~~a~P  629 (720)
                      +|||+|++|+++|..+..+++||.|||+.++|+++++||++|..|.|..||||+.|+  |++..|++|+.|+|+|++|||
T Consensus       564 ~Yiq~FkkLakal~~~~t~~~GPqPPdl~dk~islltpv~~D~tP~g~~FGdV~s~v--p~k~~~r~g~~v~v~f~sanP  641 (734)
T KOG2232|consen  564 AYIQEFKKLAKALVRDETVDRGPQPPDLLDKQISLLTPVVVDGTPIGTDFGDVKSDV--PNKSYFRRGTQVKVTFRSANP  641 (734)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCchHhhhhhhccCceeeccCccCCccccccCCC--CCchhhccccEEEEEEeccCC
Confidence            999999999999999999999999999999999999999999999999999999997  466788999999999999999


Q ss_pred             CCCCCCCCCeEEEEEecCC--ceEEEeeCCCcceEEEEE-ecCCCeeeEEEEEEEcCCCCCCcceEEEEeccccccCCCC
Q 047902          630 RYDLLTEGTYAVVEMLQGK--RWIPVYDDDDFSLYFKWS-LENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNST  706 (720)
Q Consensus       630 rn~l~~~~t~~~Ve~~~~~--~W~~v~~D~d~~t~~~w~-~~~~~~~s~~~i~W~ip~~~~~G~YRi~~~G~~k~~~~g~  706 (720)
                      ||||++|+||++|||+..+  .|++|+||+||+|||+|+ .+.+++.|++||+|+||+.+.||.|||||||.+|.++ |.
T Consensus       642 rNdl~Te~Tf~~VEr~~~~~~tW~~vydD~~~~~rf~W~r~~kl~~~S~atieW~Ipeta~pGvYRIrhfG~~k~il-g~  720 (734)
T KOG2232|consen  642 RNDLMTEGTFATVERLEEGDKTWKPVYDDDDWELRFKWSRPNKLSGFSQATIEWRIPETASPGVYRIRHFGAAKKIL-GS  720 (734)
T ss_pred             CcccccccceeeehhhhccCceeeeeecCccceeEEEeccCccccccccceEEEecCCcCCCceEEEEecccccccc-cc
Confidence            9999999999999998766  699999999999999999 6778999999999999999999999999999999999 99


Q ss_pred             ceeeEEecceeEEC
Q 047902          707 NHYFTGASSAFTVS  720 (720)
Q Consensus       707 ~~~~~g~s~~F~v~  720 (720)
                      |++|+|.|++|+|.
T Consensus       721 i~~f~Gss~aF~V~  734 (734)
T KOG2232|consen  721 IHSFEGSSSAFVVV  734 (734)
T ss_pred             ccccccCccceEeC
Confidence            99999999999984

>PTZ00487 ceramidase; Provisional	Back alignment and domain information

>PF04734 Ceramidase_alk: Neutral/alkaline non-lysosomal ceramidase; InterPro: IPR006823 This family represents a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes [, , ]	Back alignment and domain information

>COG3356 Predicted membrane protein [Function unknown]	Back alignment and domain information

>PF09843 DUF2070: Predicted membrane protein (DUF2070); InterPro: IPR019204 This domain of unknown function is found in various bacterial and archael hypothetical proteins, as well as in prokaryotic polyketide synthase	Back alignment and domain information

>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		720
2zxc_A		646	Seramidase Complexed With C2 Length = 646		1e-116

>pdb|2ZXC|A Chain A, Seramidase Complexed With C2 Length = 646

Back alignment and structure

Iteration: 1

Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust. Identities = 258/722 (35%), Positives = 379/722 (52%), Gaps = 90/722 (12%) Query: 3 YLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAG 62 Y G+G D+TG AA MMGY++L Q TAGIH R AR F++ E+++G R +VN D G Sbjct: 5 YRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLG 64 Query: 63 MASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFD 122 M Q V KVL +LK ++ +Y E N+ ++ HTH+GPGG+ Y +Y+++ LGF +++F+ Sbjct: 65 MIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFN 124 Query: 123 AIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDKEM 182 AIV IV+SI +A L+PG +F G++ NA NRS ++L NP + A Y + +D +M Sbjct: 125 AIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDPQM 182 Query: 183 TLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSSIT 242 ++L FVDA +G+ GA +W+ H TSM+ N LIS DNKG A+ +E S K Sbjct: 183 SVLSFVDA-NGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRK------- 234 Query: 243 TNIGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFC 302 S FV AF Q+N G+++PN+ Sbjct: 235 ------------------------------------SGFVAAFAQTNAGNLSPNL----- 253 Query: 303 IDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGK 362 L G GP + +E +T+ IG RQF KA ++ A +++ G+ Sbjct: 254 ------------------NLKPGSGP-FDNEFDNTREIGLRQFAKAYEIAGQAQEEVLGE 294 Query: 363 IDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTT-DGPGVFGFQQGDTEINKL 421 +D R +++FT + + + T + C AA+G AAG+T DGPG G ++G+ N Sbjct: 295 LDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAAGSTEDGPGPLGLEEGN---NPF 351 Query: 422 WKQLRDVLKK-PSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSVPG 480 L +L P Q +CQ K +L +G +PY W P VLPIQ+ R+G+L +L P Sbjct: 352 LSALGGLLTGVPPQELVQCQAEKTILADTGNK-KPYPWTPTVLPIQMFRIGQLELLGAPA 410 Query: 481 EFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAAS 540 EFT MAG R+R AV+ E H+V G NAY+ Y+ T EEYA Q YE S Sbjct: 411 EFTVMAGVRIRRAVQ------AASEAAGIRHVVFNGYANAYASYVTTREEYAAQEYEGGS 464 Query: 541 TLYGPHTLPAYIQEFKKLAQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTGDSPPAGKMFG 600 TLYGP T AY Q F +A A+ + PDLS Q++ D P GK FG Sbjct: 465 TLYGPWTQAAYQQLFVDMAVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFG 524 Query: 601 DIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTY-AVVEMLQGKRWIP--VYDDD 657 D+ + QP++ S+ GD+ + F + +P+ DL TE T+ VV + + + P V D+ Sbjct: 525 DV---LQQPRE-SYRIGDKVTVAFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPVTVATDN 580 Query: 658 DFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASSAF 717 D+ ++W S ATI W +P PG Y +RH+G++K G++ +F Sbjct: 581 DWDTQYRWERVGIS-ASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTRSF 639 Query: 718 TV 719 V Sbjct: 640 EV 641

PyMOL of 2zxc

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		720
2zws_A		646	Neutral ceramidase; prism fold and beta-sandwich f	0.0
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08

>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A* Length = 646	Back alignment and structure

 Score =  607 bits (1566), Expect = 0.0
 Identities = 252/724 (34%), Positives = 372/724 (51%), Gaps = 90/724 (12%)

Query: 1   GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLD 60
             Y  G+G  D+TG AA   MMGY++L Q TAGIH R  AR F++ E+++G R  +VN D
Sbjct: 3   LPYRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTD 62

Query: 61  AGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQS 120
            GM  Q V  KVL +LK ++  +Y E N+ ++  HTH+GPGG+  Y +Y+++ LGF +++
Sbjct: 63  LGMIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKT 122

Query: 121 FDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSPSAYLLNPAEERARYPENVDK 180
           F+AIV  IV+SI +A   L+PG +F   G++ NA  NRS  ++L NP  + A Y + +D 
Sbjct: 123 FNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDP 180

Query: 181 EMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSS 240
           +M++L FVDA +G+  GA +W+  H TSM+  N LIS DNKG A+  +E   S K+    
Sbjct: 181 QMSVLSFVDA-NGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSG--- 236

Query: 241 ITTNIGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGA 300
                                                   FV AF Q+N G+++PN    
Sbjct: 237 ----------------------------------------FVAAFAQTNAGNLSPN---- 252

Query: 301 FCIDSGKPCDFNHSSCHGDDQLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLS 360
                                L  G GP + +E  +T+ IG RQF KA ++   A +++ 
Sbjct: 253 -------------------LNLKPGSGP-FDNEFDNTREIGLRQFAKAYEIAGQAQEEVL 292

Query: 361 GKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAAGTT-DGPGVFGFQQGDTEIN 419
           G++D R  +++FT + +  + T     + C AA+G   AAG+T DGPG  G ++G+   N
Sbjct: 293 GELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAAGSTEDGPGPLGLEEGN---N 349

Query: 420 KLWKQLRDVLKK-PSQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSV 478
                L  +L   P Q   +CQ  K +L  +G   +PY W P VLPIQ+ R+G+L +L  
Sbjct: 350 PFLSALGGLLTGVPPQELVQCQAEKTILADTGNK-KPYPWTPTVLPIQMFRIGQLELLGA 408

Query: 479 PGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEA 538
           P EFT MAG R+R AV+      G        H+V  G  NAY+ Y+ T EEYA Q YE 
Sbjct: 409 PAEFTVMAGVRIRRAVQAASEAAG------IRHVVFNGYANAYASYVTTREEYAAQEYEG 462

Query: 539 ASTLYGPHTLPAYIQEFKKLAQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTGDSPPAGKM 598
            STLYGP T  AY Q F  +A A+ +          PDLS  Q++       D P  GK 
Sbjct: 463 GSTLYGPWTQAAYQQLFVDMAVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKS 522

Query: 599 FGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQG---KRWIPVYD 655
           FGD+ +   +    S+  GD+ +  F + +P+ DL TE T+  V  +     +  + V  
Sbjct: 523 FGDVLQQPRE----SYRIGDKVTVAFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPVTVAT 578

Query: 656 DDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKKAVNSTNHYFTGASS 715
           D+D+   ++W          ATI W +P    PG Y +RH+G++K           G++ 
Sbjct: 579 DNDWDTQYRWERVG-ISASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTR 637

Query: 716 AFTV 719
           +F V
Sbjct: 638 SFEV 641

PyMOL of 2zws

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		720
2zws_A		646	Neutral ceramidase; prism fold and beta-sandwich f	100.0
2p9r_A		102	Alpha-2-M, alpha-2-macroglobulin; human alpha2-mac	94.51
4fxk_A		656	Complement C4 beta chain; immune system, proteolyt	84.23

>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*	Back alignment and structure

Probab=100.00  E-value=8.6e-161  Score=1389.27  Aligned_cols=634  Identities=39%  Similarity=0.674  Sum_probs=587.1

Q ss_pred             CceEEEEEEEeccCCCCccccccccCCCCccceeecceEEEEEEEEeCCCCCEEEEEEeccccccHHHHHHHHHHHHHHh
Q 047902            1 GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRF   80 (720)
Q Consensus         1 ~~~~vG~a~~DITgP~~~v~m~GYa~~~~~a~Gihd~L~ARA~vl~~~~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~   80 (720)
                      +.|+||++++|||||+.++.||||+.+.|+++|||||||||||||+++++++|+|||++|++|+++.++++|+++|++++
T Consensus         3 ~~~~vG~g~~DITgP~~~v~m~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~   82 (646)
T 2zws_A            3 LPYRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKY   82 (646)
T ss_dssp             CSEEEEEEEEECCCCCEEEEEESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHS
T ss_pred             CceEEEEEEEeCCCCCCCceecCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHh
Confidence            46999999999999999999999999999999999999999999998634899999999999999999999999999999


Q ss_pred             CCCCCCCcEEEEeeecCCCCCcCchhhhccccccccchHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEecCccccCCh
Q 047902           81 GNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSP  160 (720)
Q Consensus        81 G~~i~~~nViisaTHTHSgP~g~~~~~~~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~Pa~l~~g~g~~~~~~~NRs~  160 (720)
                      |++|+.+||+||+|||||||++|+++.+|+++..||+++|+++|+++|++||++||++|+|++|.++++++.++++|||+
T Consensus        83 g~~~~~~nV~isaTHTHSgP~g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~  162 (646)
T 2zws_A           83 PGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSL  162 (646)
T ss_dssp             TTTCCTTTEEEEECCBSBEECCCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCH
T ss_pred             CCCCChhHEEEEeeeeCCCCcccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCCh
Confidence            98899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCHhhhhcCCCCCCCeeEEEEEEECCCCceEEEEEeeeecccccCCCCccccCChHhHHHHHHHHHhcCCCCCCc
Q 047902          161 SAYLLNPAEERARYPENVDKEMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSS  240 (720)
Q Consensus       161 ~ay~~NP~~er~~~~~~vD~~~~vL~f~~~~dG~~ia~L~~yA~HpTsl~~~n~lIS~D~~G~a~~~lE~~~~~~~~~~~  240 (720)
                      .+|++||  ||++|++++||+|++|+|++. +|+++|+|+|||||||+|+++|++||+||||+++++||+.+++      
T Consensus       163 ~ay~~NP--er~~~~g~vD~~~~vL~f~~~-dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~~~------  233 (646)
T 2zws_A          163 LSHLKNP--DIAGYEDGIDPQMSVLSFVDA-NGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSR------  233 (646)
T ss_dssp             HHHTTCS--CCTTCTTSCCCEEEEEEEEET-TCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTTCC------
T ss_pred             hhhhcCc--cccccCCCCCCceEEEEEEeC-CCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHhCC------
Confidence            9999999  899999999999999999988 8999999999999999999999999999999999999997643      


Q ss_pred             chhcchhhhhhhhhhhccCCCccCcccccccccccCCCCceEEEEEcccccCCCcCCCCcccccCCCCCCCCCCCCCCCC
Q 047902          241 ITTNIGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDD  320 (720)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaF~qg~~GDvsPn~~g~~~~d~g~~c~~~~s~c~~~~  320 (720)
                                                           +++||++|+|||+||+|||+.                      
T Consensus       234 -------------------------------------~~~fva~F~qg~~GDvsP~~~----------------------  254 (646)
T 2zws_A          234 -------------------------------------KSGFVAAFAQTNAGNLSPNLN----------------------  254 (646)
T ss_dssp             -------------------------------------STTCEEEEECSSCTTEEECCC----------------------
T ss_pred             -------------------------------------CCCeEEEEeccCcccCCcccc----------------------
Confidence                                                 367999999999999999965                      


Q ss_pred             ccccccCCCCcchhhHHHHHHHHHHHHHHHHHhhccccccCCceeEEEEeeeeeeEeecCCCCCccccccccccCccccc
Q 047902          321 QLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAA  400 (720)
Q Consensus       321 ~~~~~~GP~~~d~~~~~~~iG~~~~~~A~~l~~~~~~~l~g~v~~~~~~vd~~~~~v~~p~~~~~~~~tc~~a~G~sfaa  400 (720)
                       .|+++||++ ++++++++||++|+++|++++++..+++.++|+++|++|||+++++.++..+.+.++||++|||++|+|
T Consensus       255 -~~~~~Gp~~-~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~~g~~~~tc~~a~g~s~aa  332 (646)
T 2zws_A          255 -LKPGSGPFD-NEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAA  332 (646)
T ss_dssp             -CCTTCCTTS-CHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECGGGSSSSCEECCCCCEEC----
T ss_pred             -ccccCCCCc-ccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeecccCCcccceechhhhchhhhc
Confidence             356789984 899999999999999999999887788999999999999999999987633336889999999999999


Q ss_pred             cc-cCCCCccccccCcccchhhHHHhhhhhcCC-chhhhhhcCCccEEecCCCCCCCCcCCCceeeEEEEEECCEEEEec
Q 047902          401 GT-TDGPGVFGFQQGDTEINKLWKQLRDVLKKP-SQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSV  478 (720)
Q Consensus       401 Gt-~DG~g~~~f~qg~~~~~p~w~~~~~~~~~p-~~~~~~cq~pKpill~~G~~~~p~~~~p~~~~vqilriG~l~iv~v  478 (720)
                      |+ +||||.|+|+|+ +  ||+|+.+++++.+| ++++.+||+||||||++|+ +.||+|.|.+++||+||||+|+|+++
T Consensus       333 g~~~dgpg~~~f~q~-~--~~~w~~~~~~l~~~~~~~~~~cq~~k~ill~~g~-~~p~~~~~~~v~vqilriGdl~iv~~  408 (646)
T 2zws_A          333 GSTEDGPGPLGLEEG-N--NPFLSALGGLLTGVPPQELVQCQAEKTILADTGN-KKPYPWTPTVLPIQMFRIGQLELLGA  408 (646)
T ss_dssp             -----------CCSS-C--CHHHHHTTCSCCCCCCHHHHHHTTTCCEEECCTT-CSSSCSSCSEEEEEEEEETTEEEEEC
T ss_pred             CCcccCCCccccccc-c--chhhhhhhhhhccccchhHHhhccCcceecccCC-CCCcccccceEEEEEEEECCEEEEec
Confidence            99 999999999999 4  99999999999988 7999999999999999999 89999999999999999999999999


Q ss_pred             CCchhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEeecccccCCCCChhhhccceeeceecccCCCcHHHHHHHHHHH
Q 047902          479 PGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKL  558 (720)
Q Consensus       479 PgE~tt~~G~rlr~~v~~~~~~~~~~~~~~~~~vvv~G~aNgy~gYitT~EeY~~q~YEg~sT~~Gp~tl~a~~~~~~~L  558 (720)
                      |||+|+|+|+|||+++++++.+.      +...|+|+||+|+|+|||||+|||+.|+||+++|+|||||+++|+|++.+|
T Consensus       409 PgE~tt~~G~rlr~~~~~~~~~~------~~~~v~v~GyaN~y~gYi~T~EeY~~q~YEg~sT~~gp~tl~~~i~~~~~L  482 (646)
T 2zws_A          409 PAEFTVMAGVRIRRAVQAASEAA------GIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQQLFVDM  482 (646)
T ss_dssp             SSEECHHHHHHHHHHHHHHHGGG------TCCEEEEECSBSSCCCEECCHHHHHHCCTTTTSCTTCTTHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhhhccC------CCceEEEEecCCCCCCccCCHHHHhcCCccceeeecCCChHHHHHHHHHHH
Confidence            99999999999999999988653      357999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCCCCcccccccccCCCCCCCCCCCccccceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCC
Q 047902          559 AQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTGDSPPAGKMFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGT  638 (720)
Q Consensus       559 ~~~l~~~~~~~~gp~p~~~~~~~~~~~~~v~~d~~p~g~~fGdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t  638 (720)
                      +++|..++++++||+|||++.++++|+|+|++|.+|+|++||||+.||   . .+|++|++|+|+|++||||||||+++|
T Consensus       483 ~~~l~~~~~~~~g~~p~~~~~~~~~~~~~v~~d~~p~~~~fg~v~~~~---~-~~y~~g~~v~~~f~~~~p~n~~~~~~t  558 (646)
T 2zws_A          483 AVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQP---R-ESYRIGDKVTVAFVTGHPKNDLRTEKT  558 (646)
T ss_dssp             HHHHHHCCCCCCCCCCCCCGGGCCBCCCCCCCCCCCTTCCTTCEEECC---C-SEEETTCEEEEEEECCCGGGCCCTTSC
T ss_pred             HHHHhcCCCCCCCCCCccccccccccCCCCccCCCCCCCCCCcEeecC---c-ccccCCCEEEEEEEccCCCcccccCCc
Confidence            999999999999999999999999999999999999999999999998   3 589999999999999999999999999


Q ss_pred             eEEEEE-ecCCceE--EEeeCCCcceEEEEEecCCCeeeEEEEEEEcCCCCCCcceEEEEeccccc-cCCCCceeeEEec
Q 047902          639 YAVVEM-LQGKRWI--PVYDDDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKK-AVNSTNHYFTGAS  714 (720)
Q Consensus       639 ~~~Ve~-~~~~~W~--~v~~D~d~~t~~~w~~~~~~~~s~~~i~W~ip~~~~~G~YRi~~~G~~k~-~~~g~~~~~~g~s  714 (720)
                      |++||| .+++.|+  +|+||+||+|+|+|++.. .+.|++||+|+||.+++||+|||+|||+||+ +. |+|+||+|+|
T Consensus       559 ~~~ve~~~~~~~w~~~~v~~D~d~~t~~~w~r~~-~~~s~~~~~W~i~~~~~~g~yRi~~~g~~k~~~~-g~~~~~~g~s  636 (646)
T 2zws_A          559 FLEVVNIGKDGKQTPVTVATDNDWDTQYRWERVG-ISASKATISWSIPPGTEPGHYYIRHYGNAKNFWT-QKISEIGGST  636 (646)
T ss_dssp             SEEEEEEESSSCCCCEEEEETTSTTEEEEEEEET-TTEEEEEEEEECCTTCCSEEEEEEEEEEEECTTT-CCEEEEEEEC
T ss_pred             eEEEEEecCCCceEEEEEecCCCccEEEEEEeCC-CCceEEEEEEECCCCCCCcceEEEEEcccccccC-CCceeeEEec
Confidence            999999 5555999  999999999999999443 3899999999999999999999999999999 88 9999999999


Q ss_pred             ceeEEC
Q 047902          715 SAFTVS  720 (720)
Q Consensus       715 ~~F~v~  720 (720)
                      ++|+|.
T Consensus       637 ~~f~v~  642 (646)
T 2zws_A          637 RSFEVL  642 (646)
T ss_dssp             CCEEEE
T ss_pred             ccEEEe
Confidence            999984

PyMOL of 2zws

>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}	Back alignment and structure

>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00