Citrus Sinensis ID: 047904

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------45
MGASLIQSLSPGLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFNPN
cccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEEcccccccEEEEcccccccccccccccccccccccccccccccccEEEEEEEccccccEEcccccccccccccccccccccccEEEEcccccccccccccccEEcccccccccccHHHHHHHHHHHcccccccccccEEEccccccccccccccEEEEEEcccEEEEEEEEccccccEEEEEcccccEEEEEcccccccEEEcEEEEccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEcccccccccccccccccccEEEEEcccccccc
cccccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEEEEcccccccEEEEEcccccEcccccccHHHcccEcccEccEcccEEEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHccccccEEEEcccccccccccccccEEEEccccccccHHHHHHHHHHHHccccccccccEEEEcccccccccccccEcEEEccccEEEEEEEEcccccEEEEEEccccEEEEEEccEEEEEEEEccEEEccccEEEEEEEcccccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccccccEcccEEccccHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEEcccEccccccccEEcccEEEEEEccccccccc
mgasliqslspglkgVLCSFIALCLlaepafgitrhYEFDIKLqnlngkfpgprivaregdqlhGIRRlrsgwadgpayitqcpiqtgqscvynftivgrrgKLWWHAHMTCLplwesagewfnggpKAIINQAlqtgggpnasdaftinglsgslynrsakefqVEDMIFEEKNEGRALVDVILSNQEYigemnagrdmilkvkpgkTYLLRIINAALNDELFFSIANHTLKVVEADvvyvkpfetetlliapgqttngtfdnstvagileyerppnfhhssnsikklplfkpiLHALKDISFATCFTSKLRslastqfpanvpqnvdrRFFFTvglgtspcqtsvnnisfvmpttalfqahfigkpngvytpdfptsplipfnytgnppnntmvsngTTLVVLTFNTNVELIMqdtsilgteshplhlhgfnffvigqgfgnfnpn
MGASLIQSLSPGLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETEtlliapgqttngtfDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLAStqfpanvpqnVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFNPN
MGASLIQSLSPGLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSngttlvvltfntnvelIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFNPN
**********PGLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGN****
*************KGVLCSFIALCLLAEPAFGITRHYEFDIKLQNLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGN****
********LSPGLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFNPN
*****IQSLSPGLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFN**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGASLIQSLSPGLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFNPN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query448 2.2.26 [Sep-21-2011]
Q9FJD5577 Laccase-17 OS=Arabidopsis yes no 0.897 0.696 0.552 1e-151
Q5N9X2579 Laccase-4 OS=Oryza sativa yes no 0.852 0.659 0.511 1e-135
Q10ND7578 Laccase-10 OS=Oryza sativ no no 0.841 0.652 0.493 1e-129
O81081573 Laccase-2 OS=Arabidopsis no no 0.837 0.654 0.492 1e-128
Q0DHL2574 Laccase-12/13 OS=Oryza sa no no 0.875 0.682 0.483 1e-126
Q0DHL5540 Putative laccase-11 OS=Or no no 0.816 0.677 0.465 1e-113
Q0IQU1564 Laccase-22 OS=Oryza sativ no no 0.859 0.682 0.408 7e-96
Q5N9W4547 Putative laccase-5 OS=Ory no no 0.763 0.625 0.408 4e-92
Q8VZA1557 Laccase-11 OS=Arabidopsis no no 0.870 0.700 0.398 1e-91
O80434558 Laccase-4 OS=Arabidopsis no no 0.863 0.693 0.380 2e-89
>sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 Back     alignment and function desciption
 Score =  534 bits (1375), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 295/534 (55%), Positives = 341/534 (63%), Gaps = 132/534 (24%)

Query: 12  GLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNL------------NGKFPGPRIVARE 59
            L+ +L  F  + LL +PAFGITRHY  +IK+QN+            NG+FPGP+++ARE
Sbjct: 2   ALQLLLAVFSCVLLLPQPAFGITRHYTLEIKMQNVTRLCHTKSLVSVNGQFPGPKLIARE 61

Query: 60  GDQL----------------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGK 103
           GDQ+                HGIR+LRSGWADGPAYITQCPIQTGQS VYN+TIVG+RG 
Sbjct: 62  GDQVLIKVVNQVPNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGT 121

Query: 104 LWWHAHMTCL----------------------PLWESA---GEWFNGGPKAIINQALQTG 138
           LW+HAH++ L                      P  E     GEWFN   +AII QA QTG
Sbjct: 122 LWYHAHISWLRSTVYGPLIILPKRGVPYPFAKPHKEVPMIFGEWFNADTEAIIRQATQTG 181

Query: 139 GGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGR 198
           GGPN SDA+TINGL G LYN SAK+                                   
Sbjct: 182 GGPNVSDAYTINGLPGPLYNCSAKD----------------------------------- 206

Query: 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTT 258
              L+VKPGKTYLLR+INAALNDELFFSIANHT+ VVEAD +YVKPFETET+LIAPGQTT
Sbjct: 207 TFRLRVKPGKTYLLRLINAALNDELFFSIANHTVTVVEADAIYVKPFETETILIAPGQTT 266

Query: 259 N-------------------------GTFDNSTVAGILEYERPPNFH--HSSNSIKKLPL 291
           N                         GTFDNSTVAGILEYE P      HS  SIK L L
Sbjct: 267 NVLLKTKSSYPSASFFMTARPYVTGQGTFDNSTVAGILEYEPPKQTKGAHSRTSIKNLQL 326

Query: 292 FKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQ------- 344
           FKPIL AL D +FAT F++KLRSL S  FPANVP NVDR+FFFTVGLGT+PC        
Sbjct: 327 FKPILPALNDTNFATKFSNKLRSLNSKNFPANVPLNVDRKFFFTVGLGTNPCNHKNNQTC 386

Query: 345 ----------TSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNT 394
                      S++NISF MPT AL Q+H+ G+ +GVY+P FP SP++PFNYTG PPNNT
Sbjct: 387 QGPTNTTMFAASISNISFTMPTKALLQSHYSGQSHGVYSPKFPWSPIVPFNYTGTPPNNT 446

Query: 395 MVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFNPN 448
           MVSNGT L+VL +NT+VEL+MQDTSILG ESHPLHLHGFNFFV+GQGFGNF+PN
Sbjct: 447 MVSNGTNLMVLPYNTSVELVMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPN 500
Lignin degradation and detoxification of lignin-derived products.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2
>sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 Back     alignment and function description
>sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 Back     alignment and function description
>sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 Back     alignment and function description
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 Back     alignment and function description
>sp|Q5N9W4|LAC5_ORYSJ Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1 Back     alignment and function description
>sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 Back     alignment and function description
>sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query448
224060169 580 predicted protein [Populus trichocarpa] 0.917 0.708 0.568 1e-157
224057692 581 predicted protein [Populus trichocarpa] 0.917 0.707 0.584 1e-157
224128342 581 predicted protein [Populus trichocarpa] 0.915 0.705 0.574 1e-155
147858029 611 hypothetical protein VITISV_003134 [Viti 0.917 0.672 0.570 1e-153
225435092 585 PREDICTED: laccase-17 [Vitis vinifera] 0.917 0.702 0.570 1e-153
356527433 579 PREDICTED: laccase-17-like [Glycine max] 0.912 0.706 0.560 1e-152
297746143 566 unnamed protein product [Vitis vinifera] 0.877 0.694 0.578 1e-152
356524555 578 PREDICTED: laccase-17-like [Glycine max] 0.886 0.686 0.558 1e-151
359479021 585 PREDICTED: laccase-17-like [Vitis vinife 0.917 0.702 0.561 1e-151
255582055 576 laccase, putative [Ricinus communis] gi| 0.886 0.689 0.570 1e-150
>gi|224060169|ref|XP_002300066.1| predicted protein [Populus trichocarpa] gi|222847324|gb|EEE84871.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/540 (56%), Positives = 345/540 (63%), Gaps = 129/540 (23%)

Query: 1   MGASLIQSLSPGLKGVLCSFIALCLLAEPAFGITRHYEFDIKLQNL------------NG 48
           MGAS++    P  + +L SF   CLL E AF +TRHY+FDIKLQN+            NG
Sbjct: 1   MGASILPP--PAFRALLFSFSIFCLLPEHAFAVTRHYKFDIKLQNVTRLCHSKSMVTVNG 58

Query: 49  KFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQCPIQTGQSCV 92
           +FPGPRIVAREGD L                HGIR+L+SGWADGPAYITQCPIQTGQS V
Sbjct: 59  QFPGPRIVAREGDNLFIKVVNHVQNNISIHWHGIRQLQSGWADGPAYITQCPIQTGQSYV 118

Query: 93  YNFTIVGRRGKLWWHAHMTCL----------------------PLWESA---GEWFNGGP 127
           YN+TIVG+RG LWWHAH++ L                      P  E     GEWFN  P
Sbjct: 119 YNYTIVGQRGTLWWHAHISWLRSTVYGPLIILPKRGVQYPFAKPYKEVPIIFGEWFNVDP 178

Query: 128 KAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSN 187
           +A+I+QALQTGGGPN SDA+TINGL G LYN SA++                        
Sbjct: 179 EAVISQALQTGGGPNVSDAYTINGLPGPLYNCSAED------------------------ 214

Query: 188 QEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFET 247
                         LKVKPGKTY+LR+INAALNDELFFSIANH++ +V+ D VYVKPF+T
Sbjct: 215 -----------TFKLKVKPGKTYMLRLINAALNDELFFSIANHSVTIVDVDAVYVKPFDT 263

Query: 248 ETLLIAPGQTTN-------------------------GTFDNSTVAGILEYERPPNFHHS 282
           ETLLI PGQTTN                         GTFDNSTVA ILEYE P   H S
Sbjct: 264 ETLLITPGQTTNVLLKTKPYFPNATFFMTARPYATGQGTFDNSTVAAILEYESPKTIHSS 323

Query: 283 SNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSP 342
             S+K LPLFKP L  L D +FA  FTSKLRSLAS QFPA VPQ VD RFFFTVGLGT+P
Sbjct: 324 QLSLKNLPLFKPTLPPLNDTAFAANFTSKLRSLASAQFPAKVPQKVDMRFFFTVGLGTNP 383

Query: 343 C--------------QTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTG 388
           C                SVNN+SF +PTTAL QAHF GK NGVY PDFP +P+ PFNYTG
Sbjct: 384 CPKNQTCQGPNGTKFAASVNNVSFSLPTTALLQAHFFGKSNGVYIPDFPITPIFPFNYTG 443

Query: 389 NPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFNPN 448
           NPPNNTMVS GT LVVL FNT+VELIMQDTSILG ESHPLHLHG+NFFV+GQGFGNF+PN
Sbjct: 444 NPPNNTMVSTGTRLVVLPFNTSVELIMQDTSILGVESHPLHLHGYNFFVVGQGFGNFDPN 503

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224057692|ref|XP_002299296.1| predicted protein [Populus trichocarpa] gi|222846554|gb|EEE84101.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224128342|ref|XP_002329138.1| predicted protein [Populus trichocarpa] gi|222869807|gb|EEF06938.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147858029|emb|CAN80346.1| hypothetical protein VITISV_003134 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225435092|ref|XP_002284473.1| PREDICTED: laccase-17 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356527433|ref|XP_003532315.1| PREDICTED: laccase-17-like [Glycine max] Back     alignment and taxonomy information
>gi|297746143|emb|CBI16199.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356524555|ref|XP_003530894.1| PREDICTED: laccase-17-like [Glycine max] Back     alignment and taxonomy information
>gi|359479021|ref|XP_003632204.1| PREDICTED: laccase-17-like [Vitis vinifera] gi|297746168|emb|CBI16224.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582055|ref|XP_002531824.1| laccase, putative [Ricinus communis] gi|223528520|gb|EEF30544.1| laccase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query448
TAIR|locus:2066117573 LAC2 "laccase 2" [Arabidopsis 0.696 0.544 0.433 8.5e-77
TAIR|locus:2168128577 LAC17 "laccase 17" [Arabidopsi 0.716 0.556 0.378 9.6e-76
TAIR|locus:2143563557 LAC11 "laccase 11" [Arabidopsi 0.805 0.648 0.378 5.4e-65
TAIR|locus:2154518566 LAC16 "laccase 16" [Arabidopsi 0.805 0.637 0.352 6.1e-60
TAIR|locus:2060879 570 LAC3 "laccase 3" [Arabidopsis 0.444 0.349 0.382 1.3e-59
TAIR|locus:2042842558 IRX12 "IRREGULAR XYLEM 12" [Ar 0.803 0.645 0.350 1.1e-58
TAIR|locus:2194110 581 LAC1 "laccase 1" [Arabidopsis 0.455 0.351 0.385 5.3e-58
TAIR|locus:2150139558 LAC10 "laccase 10" [Arabidopsi 0.475 0.381 0.353 1.6e-54
TAIR|locus:2063109 580 LAC5 "laccase 5" [Arabidopsis 0.444 0.343 0.361 8.3e-54
TAIR|locus:2182895569 LAC13 "laccase 13" [Arabidopsi 0.680 0.536 0.317 7e-53
TAIR|locus:2066117 LAC2 "laccase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 675 (242.7 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
 Identities = 149/344 (43%), Positives = 203/344 (59%)

Query:   120 GEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRA 179
             GEWFN  P+A++ QALQTG GPNASDA T NGL G LYN S K+   + M+   K     
Sbjct:   168 GEWFNADPQAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKD-TYKLMVKPGKTYLLR 226

Query:   180 LVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADV 239
             L++  L+++ +    N     +  V+    Y    +     + +       T  +++   
Sbjct:   227 LINAALNDELFFTIAN---HTLTVVEADACY----VKPFQTNIVLLGPGQTTNVLLKTKP 279

Query:   240 VYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHAL 299
             +Y  P  T  +L  P  T  GT DN+TVAGIL+Y+     HH+ +S K L + KP L  +
Sbjct:   280 IY--PNATFYMLARPYFTGQGTIDNTTVAGILQYQ-----HHTKSS-KNLSIIKPSLPPI 331

Query:   300 KDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPC---QT----------- 345
                S+A  FT   RSLAS+ FPANVP+ VD+++FF +GLGT+PC   QT           
Sbjct:   332 NSTSYAANFTKMFRSLASSTFPANVPKVVDKQYFFAIGLGTNPCPKNQTCQGPTNTTKFA 391

Query:   346 -SVNNISFVMPT-TALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSXXXXXX 403
              S+NN+SF++P  T+L Q++F+GK   V+  DFPT+P+IPFNYTG PPNNTMVS      
Sbjct:   392 ASINNVSFILPNKTSLLQSYFVGKSKNVFMTDFPTAPIIPFNYTGTPPNNTMVSRGTKVV 451

Query:   404 XXXXXXXXXXIMQDTSILGTESHPLHLHGFNFFVIGQGFGNFNP 447
                       ++Q TSILG E+HP+HLHGFNF+V+GQGFGNFNP
Sbjct:   452 VLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVGQGFGNFNP 495
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0046274 "lignin catabolic process" evidence=IEA
GO:0048046 "apoplast" evidence=IEA
GO:0052716 "hydroquinone:oxygen oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009414 "response to water deprivation" evidence=IEP;IMP
TAIR|locus:2168128 LAC17 "laccase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154518 LAC16 "laccase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060879 LAC3 "laccase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042842 IRX12 "IRREGULAR XYLEM 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194110 LAC1 "laccase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063109 LAC5 "laccase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182895 LAC13 "laccase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5N9X2LAC4_ORYSJ1, ., 1, 0, ., 3, ., 20.51170.85260.6597yesno
Q9FJD5LAC17_ARATH1, ., 1, 0, ., 3, ., 20.55240.89730.6967yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.30.921
3rd Layer1.10.3.20.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query448
TIGR03389539 TIGR03389, laccase, laccase, plant 1e-173
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 3e-28
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 1e-27
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 4e-24
pfam07732119 pfam07732, Cu-oxidase_3, Multicopper oxidase 5e-24
PLN02604566 PLN02604, PLN02604, oxidoreductase 1e-18
PLN02991543 PLN02991, PLN02991, oxidoreductase 3e-18
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 4e-15
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 1e-14
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 2e-14
PLN00044 596 PLN00044, PLN00044, multi-copper oxidase-related p 3e-13
PLN02604566 PLN02604, PLN02604, oxidoreductase 1e-12
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 3e-12
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 4e-10
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 6e-10
PLN02835539 PLN02835, PLN02835, oxidoreductase 3e-09
PLN02792536 PLN02792, PLN02792, oxidoreductase 2e-07
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 2e-04
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information 
 Score =  495 bits (1276), Expect = e-173
 Identities = 238/506 (47%), Positives = 286/506 (56%), Gaps = 135/506 (26%)

Query: 32  GITRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL---------------- 63
              RHY FD++ +N            +NGKFPGP + AREGD +                
Sbjct: 1   AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHW 60

Query: 64  HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL---------- 113
           HG+R+LR+GWADGPAYITQCPIQ GQS VYNFTI G+RG LWWHAH++ L          
Sbjct: 61  HGVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVI 120

Query: 114 ------------PLWESA---GEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYN 158
                       P  E     GEW+N   +A+INQA QTGG PN SDA+TING  G LYN
Sbjct: 121 LPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYN 180

Query: 159 RSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAA 218
            S+K+                                      L V+PGKTYLLRIINAA
Sbjct: 181 CSSKD-----------------------------------TFKLTVEPGKTYLLRIINAA 205

Query: 219 LNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTN------------------- 259
           LNDELFF+IANHTL VVE D  Y KPF+T+T++I PGQTTN                   
Sbjct: 206 LNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMAARPY 265

Query: 260 ----GTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSL 315
               G FDN+T   IL+Y+   N               P L A  D + AT F++KLRSL
Sbjct: 266 MDAPGAFDNTTTTAILQYKGTSNSAKPI---------LPTLPAYNDTAAATNFSNKLRSL 316

Query: 316 ASTQFPANVPQNVDRRFFFTVGLGTSPCQT-------------SVNNISFVMPTTALFQA 362
            S Q+PANVP  +DRR FFT+GLG  PC               S+NNISFVMPTTAL QA
Sbjct: 317 NSAQYPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQA 376

Query: 363 HFIGKPNGVYTPDFPTSPLIPFNYTGNP-PNNTMVSNGTTLVVLTFNTNVELIMQDTSIL 421
           H+ G   GV+T DFP +P   FNYTG   PNN   +NGT +V L FN+ VEL++QDTSIL
Sbjct: 377 HYFGIS-GVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSIL 435

Query: 422 GTESHPLHLHGFNFFVIGQGFGNFNP 447
           G+E+HP+HLHG+NFFV+G GFGNF+P
Sbjct: 436 GSENHPIHLHGYNFFVVGTGFGNFDP 461

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 448
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN00044 596 multi-copper oxidase-related protein; Provisional 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN02792536 oxidoreductase 100.0
PLN02991543 oxidoreductase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
PLN02835539 oxidoreductase 100.0
PLN02191574 L-ascorbate oxidase 100.0
PLN02604566 oxidoreductase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 100.0
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.89
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 99.88
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 99.32
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 99.12
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 98.84
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 98.6
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 98.11
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 97.95
PRK10965523 multicopper oxidase; Provisional 97.61
PLN02835 539 oxidoreductase 97.56
TIGR03389 539 laccase laccase, plant. Members of this protein fa 97.46
PLN02354 552 copper ion binding / oxidoreductase 97.32
TIGR03388 541 ascorbase L-ascorbate oxidase, plant type. Members 97.25
PLN02168 545 copper ion binding / pectinesterase 97.22
PLN02991 543 oxidoreductase 97.17
PLN02792 536 oxidoreductase 97.13
PLN02604 566 oxidoreductase 97.07
TIGR03390 538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 97.07
PLN02191 574 L-ascorbate oxidase 96.9
PRK02710119 plastocyanin; Provisional 96.83
PLN00044 596 multi-copper oxidase-related protein; Provisional 96.74
COG2132451 SufI Putative multicopper oxidases [Secondary meta 96.24
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.18
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 96.05
TIGR0265783 amicyanin amicyanin. Members of this family are am 95.82
PRK10883471 FtsI repressor; Provisional 95.69
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 95.4
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 95.21
KOG1263 563 consensus Multicopper oxidases [Secondary metaboli 95.1
PRK02888635 nitrous-oxide reductase; Validated 94.52
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 91.5
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 89.86
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 88.78
COG3794128 PetE Plastocyanin [Energy production and conversio 87.96
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 87.72
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 86.81
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 85.08
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 83.31
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 82.01
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 80.68
>TIGR03389 laccase laccase, plant Back     alignment and domain information 
Probab=100.00  E-value=2.9e-72  Score=592.68  Aligned_cols=371  Identities=63%  Similarity=1.090  Sum_probs=288.8

Q ss_pred             ceeEEEEEEEEEEe------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccccC
Q 047904           32 GITRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQC   83 (448)
Q Consensus        32 ~~~~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~   83 (448)
                      +++|+|+|+|++.+            |||++|||+|++++||+|                ||++|++++||||||++|||
T Consensus         1 ~~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~   80 (539)
T TIGR03389         1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQC   80 (539)
T ss_pred             CceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccC
Confidence            47899999999987            999999999999999999                99999999999999999999


Q ss_pred             CCCCCCeeEEEEEeCCccceeEEeecCCCC------------------C----ccc---ccCCCccCCHHHHHHHHHhcC
Q 047904           84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTCL------------------P----LWE---SAGEWFNGGPKAIINQALQTG  138 (448)
Q Consensus        84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~------------------P----~~e---~~~d~~~~~~~~~~~~~~~~g  138 (448)
                      ||+||++|+|+|++++++||||||||.+.+                  |    ++|   +++||++.+..+++......|
T Consensus        81 pI~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~  160 (539)
T TIGR03389        81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG  160 (539)
T ss_pred             CcCCCCeEEEEEEecCCCeeEEEecCchhhhccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcC
Confidence            999999999999986699999999998766                  1    234   889999998888776666566


Q ss_pred             CCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEecc
Q 047904          139 GGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAA  218 (448)
Q Consensus       139 ~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~  218 (448)
                      ..+.++|++||||+.+..++|..                                   ...+.|+|++||+|||||||+|
T Consensus       161 ~~~~~~d~~liNG~~~~~~~~~~-----------------------------------~~~~~i~v~~G~~~RlRlINa~  205 (539)
T TIGR03389       161 GAPNVSDAYTINGHPGPLYNCSS-----------------------------------KDTFKLTVEPGKTYLLRIINAA  205 (539)
T ss_pred             CCCCccceEEECCCcCCCCCCCC-----------------------------------CCceEEEECCCCEEEEEEEecc
Confidence            65667899999999765555542                                   1237899999999999999999


Q ss_pred             CCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc-----------------------CCcceEEEEEEeC
Q 047904          219 LNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF-----------------------DNSTVAGILEYER  275 (448)
Q Consensus       219 ~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~-----------------------~~~~~~aiL~Y~~  275 (448)
                      +...+.|+||||+|+|||+||.+++|+.++++.|++||||||.+                       ....+.|||+|.+
T Consensus       206 ~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~~GqRydVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~  285 (539)
T TIGR03389       206 LNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKG  285 (539)
T ss_pred             CCceEEEEECCCeEEEEEeCCcccCceEeCeEEecCCCEEEEEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECC
Confidence            99999999999999999999999999999999999999999610                       1234799999987


Q ss_pred             CCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCCCCCCcceEEEEEEeeC-------------CCC
Q 047904          276 PPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLG-------------TSP  342 (448)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~~-------------~~~  342 (448)
                      +..        ...+.. +..+.+++......+..+++++..+.++..+|..+++++++.+++.             +..
T Consensus       286 ~~~--------~~~p~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (539)
T TIGR03389       286 TSN--------SAKPIL-PTLPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNGTR  356 (539)
T ss_pred             CCC--------CCCCCC-CCCCCCCchhhhhHHHhhcccccccCCCCCCCCCCCeEEEEEeecccccCcccccccCCCcE
Confidence            643        111111 2222233221111111234444333334445556777777666542             223


Q ss_pred             CcccccceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCC-CCCCccCCceeEEEeecCCEEEEEEeecCCC
Q 047904          343 CQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNP-PNNTMVSNGTTLVVLTFNTNVELIMQDTSIL  421 (448)
Q Consensus       343 ~~~~iN~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~  421 (448)
                      +.|+|||++|..|.+|+|.+.+.+++ |.+..+|+..+|++|++++.. ..++..+.+++++.++.|++|||||+|....
T Consensus       357 ~~w~in~~s~~~p~~p~l~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~  435 (539)
T TIGR03389       357 FAASMNNISFVMPTTALLQAHYFGIS-GVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSIL  435 (539)
T ss_pred             EEEEECCcccCCCCcchhhhhhcccC-CccccCCccCCCccccCCCCCcccccccccCceEEEecCCCEEEEEEecCCcC
Confidence            46999999999999999988776554 556666777888888766542 2233345678999999999999999997533


Q ss_pred             CCCCCCcccCCCceEEEEecCCCCCC
Q 047904          422 GTESHPLHLHGFNFFVIGQGFGNFNP  447 (448)
Q Consensus       422 ~~~~HP~HLHGh~F~Vl~~G~G~~~~  447 (448)
                      ....||||||||+||||++|.|.|++
T Consensus       436 ~~~~HP~HLHGh~F~Vlg~g~g~~~~  461 (539)
T TIGR03389       436 GSENHPIHLHGYNFFVVGTGFGNFDP  461 (539)
T ss_pred             CCCCCcEeEcCCceEEEEeccCCCCc
Confidence            35689999999999999999999964

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query448
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 5e-26
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 2e-17
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 5e-17
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 6e-17
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 5e-16
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 5e-16
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 7e-16
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 7e-16
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 7e-16
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 1e-15
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 2e-15
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 4e-15
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 4e-15
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 6e-15
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 1e-14
1gyc_A499 Crystal Structure Determination At Room Temperature 3e-14
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 2e-13
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 5e-13
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 6e-13
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 6e-13
1gw0_A 559 Crystal Structure Of Laccase From Melanocarpus Albo 6e-12
3dkh_A 559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 6e-12
1zpu_A 534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 6e-12
2q9o_A 559 Near-Atomic Resolution Structure Of A Melanocarpus 8e-12
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 2e-11
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 200/478 (41%), Gaps = 82/478 (17%)
Query: 35  RHYEFDIK------------LQNLNGKFPGPRIVAREGDQL-----------------HG 65
           RHY+++++            +  +NG+FPGP I A  GD +                 HG
Sbjct: 4   RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 66  IRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG 125
           I +  + WADG A I+QC I  G++  YNFT V   G  ++H H   L +  SAG +   
Sbjct: 64  ILQRGTPWADGTASISQCAINPGETFFYNFT-VDNPGTFFYHGH---LGMQRSAGLY--- 116
Query: 126 GPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVE------DMIFEEKN---E 176
              ++I    Q    P   D   IN L    +++S  + +V         I E +     
Sbjct: 117 --GSLIVDPPQGKKEPFHYDG-EINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLN 173
Query: 177 GRALVDVIL-----SNQE--YIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIAN 229
           GR   D  +     SN E   +    +    I  V P KTY +RI +      L F+I N
Sbjct: 174 GRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGN 233
Query: 230 HTLKVVEADVVYVKPFETETLLIAPGQ------TTNGTFDNSTVAGILEYERPPN----- 278
           H L VVEAD  YV+PF T  + I  G+      TT+     +    +    R PN     
Sbjct: 234 HQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGL 293
Query: 279 --FHHSSNSIKKLPLF-KPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFF- 334
              ++  NS+ KLP    P   A  D   +  FT ++ +   +  P   P   +RR F  
Sbjct: 294 TLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLL 350
Query: 335 -TVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDF-PTSPLIPFNYT-GNPP 391
            T  +     + ++N++S  +P T    A    K N ++  D  P   + P +Y    PP
Sbjct: 351 NTQNVINGYVKWAINDVSLALPPTPYLGAM---KYNLLHAFDQNPPPEVFPEDYDIDTPP 407
Query: 392 NNTMVSXXXXXXXXXXXXXXXXIMQDTSILG---TESHPLHLHGFNFFVIGQGFGNFN 446
            N                    I+Q+ +++    +E+HP HLHG +F+V+G G G F+
Sbjct: 408 TNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFS 465
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query448
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 1e-116
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 1e-101
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 2e-99
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 2e-96
2q9o_A 559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 7e-96
1zpu_A 534 Iron transport multicopper oxidase FET3; ferroxida 5e-94
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 1e-88
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 4e-86
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 2e-55
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 9e-52
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 2e-30
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 3e-20
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 5e-15
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 3e-14
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 4e-14
3abg_A 534 Bilirubin oxidase; cleavage on PAIR of basic resid 2e-13
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 1e-12
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 1e-07
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 4e-11
2zoo_A442 Probable nitrite reductase; electron transfer, ele 2e-10
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 3e-10
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 5e-10
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 8e-10
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 4e-09
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 6e-04
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 2e-09
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 6e-09
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 9e-09
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 2e-08
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 2e-08
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 1e-05
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 1e-05
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 8e-05
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  351 bits (902), Expect = e-116
 Identities = 107/496 (21%), Positives = 172/496 (34%), Gaps = 112/496 (22%)

Query: 34  TRHYEFDIKLQNL------------NGKFPGPRIVAREGDQL-----------------H 64
            RHY+++++                NG+FPGP I A  GD +                 H
Sbjct: 3   IRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWH 62

Query: 65  GIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL----------- 113
           GI +  + WADG A I+QC I  G++  YNFT V   G  ++H H+              
Sbjct: 63  GILQRGTPWADGTASISQCAINPGETFFYNFT-VDNPGTFFYHGHLGMQRSAGLYGSLIV 121

Query: 114 --PLWESA------------GEWFNGGPKAIINQAL-QTGGGPNASDAFTINGLSGSLYN 158
             P  +               +W++            +            +NG      +
Sbjct: 122 DPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181

Query: 159 RSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAA 218
            +AK     +    + +E  A                     I  V P KTY +RI +  
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPY-------------------IFHVSPKKTYRIRIASTT 222

Query: 219 LNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTN------------------- 259
               L F+I NH L VVEAD  YV+PF T  + I  G++ +                   
Sbjct: 223 ALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGT 282

Query: 260 --GTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLAS 317
                +      +L Y         ++  K      P   A  D   +  FT ++ +   
Sbjct: 283 RARHPNTPPGLTLLNYL-------PNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMG 335

Query: 318 TQFPANVPQNVDRRFFFTVGLGTSPCQT--SVNNISFVMPTTALFQAHFIGKPNGVYTPD 375
           +  P   P   +RR F              ++N++S  +P T    A         +  +
Sbjct: 336 SPKP---PVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLL-HAFDQN 391

Query: 376 FPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILG---TESHPLHLHG 432
            P            PP N     G  +        V++I+Q+ +++    +E+HP HLHG
Sbjct: 392 PPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHG 451

Query: 433 FNFFVIGQGFGNFNPN 448
            +F+V+G G G F+  
Sbjct: 452 HDFWVLGYGDGKFSAE 467
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query448
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
1zpu_A 534 Iron transport multicopper oxidase FET3; ferroxida 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 100.0
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.98
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.97
2zoo_A442 Probable nitrite reductase; electron transfer, ele 99.97
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.97
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.97
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.96
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.96
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.95
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.95
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.95
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.94
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 99.94
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 99.93
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.92
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 99.91
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.9
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.88
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.43
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.3
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.23
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.23
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.17
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.09
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 98.94
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 98.91
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 98.87
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 98.78
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 98.76
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 98.75
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 98.68
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 98.68
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 98.6
2cal_A154 Rusticyanin; iron respiratory electron transport c 98.5
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 98.5
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 98.5
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 98.5
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 98.49
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 98.48
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 98.4
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 98.17
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 98.13
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.06
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 97.99
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 97.96
1aoz_A 552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 97.86
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 97.81
3pxl_A 499 Laccase; 4-copper protein, metal-binding, oxidored 97.81
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 97.69
3c75_A132 Amicyanin; copper proteins, electron transfer comp 97.68
3sqr_A 580 Laccase; multicopper oxidase, glycosylation, oxido 97.55
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 97.53
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 97.49
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 97.46
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 97.41
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 97.39
1byp_A99 Protein (plastocyanin); electron transfer, photosy 97.37
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 97.37
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 97.36
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 97.35
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 97.24
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 97.23
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 97.2
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 97.12
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 96.97
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 96.93
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 96.9
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 96.88
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 96.85
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 96.8
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 96.78
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 96.73
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 96.73
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 96.64
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 96.39
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 94.1
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 93.73
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 93.63
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 93.06
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 91.27
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 88.39
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 86.97
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 86.05
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 85.5
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 84.23
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 81.07
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 80.78
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 80.58
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=4.2e-65  Score=541.03  Aligned_cols=379  Identities=27%  Similarity=0.454  Sum_probs=278.4

Q ss_pred             ceeEEEEEEEEEEe------------eCCcCCCceEEEecCCee-----------------eecccCCCCCCCCCCcccc
Q 047904           32 GITRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL-----------------HGIRRLRSGWADGPAYITQ   82 (448)
Q Consensus        32 ~~~~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v-----------------HGl~~~~~~~~DGvp~vtq   82 (448)
                      +++|+|+|+|++..            |||++|||+|||++||+|                 ||++|++++||||+|++||
T Consensus         1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq   80 (552)
T 1aoz_A            1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ   80 (552)
T ss_dssp             CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred             CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence            47899999999986            999999999999999999                 9999999999999999999


Q ss_pred             CCCCCCCeeEEEEEeCCccceeEEeecCCCC-------------C---------ccc---ccCCCccCCHHHHHHHHHhc
Q 047904           83 CPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL-------------P---------LWE---SAGEWFNGGPKAIINQALQT  137 (448)
Q Consensus        83 ~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~-------------P---------~~e---~~~d~~~~~~~~~~~~~~~~  137 (448)
                      |||+||++|+|+|++ +++||||||||...|             +         ++|   +++||++.+..+++......
T Consensus        81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~  159 (552)
T 1aoz_A           81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSK  159 (552)
T ss_dssp             CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred             CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhcc
Confidence            999999999999998 899999999999888             1         235   89999999887765433221


Q ss_pred             C-CCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCc-----ccceEEEEeCCcEEE
Q 047904          138 G-GGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNA-----GRDMILKVKPGKTYL  211 (448)
Q Consensus       138 g-~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~-----~~~~~i~v~~G~~~R  211 (448)
                      . .....++.+||||+.  .++|+....      .....                ..|+.     .+++.++|++||+||
T Consensus       160 ~~~~~~~~~~~liNG~~--~~~c~~~~~------~~~~~----------------~~c~~~~~~~~~~~~~~v~~G~~~R  215 (552)
T 1aoz_A          160 PIRWIGEPQTILLNGRG--QFDCSIAAK------YDSNL----------------EPCKLKGSESCAPYIFHVSPKKTYR  215 (552)
T ss_dssp             SCCCCCSCSEEEETTBC--CSSSBTTGG------GCTTS----------------CBCCCCSCSTTSCCCEEECTTCEEE
T ss_pred             cccCCCCCCeEEECCcc--ccCcccCcc------ccccc----------------ccccccCCCCCCceEEEEcCCCEEE
Confidence            1 111346899999986  455643110      00000                01221     123589999999999


Q ss_pred             EEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccc--c-------------------CCcceEEE
Q 047904          212 LRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGT--F-------------------DNSTVAGI  270 (448)
Q Consensus       212 lRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~--~-------------------~~~~~~ai  270 (448)
                      |||||+|+.+.+.|+|+||+|+|||+||.+++|+.++++.|++|||||+.  +                   ....+.||
T Consensus       216 lRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ai  295 (552)
T 1aoz_A          216 IRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTL  295 (552)
T ss_dssp             EEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEE
T ss_pred             EEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEE
Confidence            99999999999999999999999999999999999999999999999972  1                   11346899


Q ss_pred             EEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCCCCCCcceEEEEEEeeCCC--CCccccc
Q 047904          271 LEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTS--PCQTSVN  348 (448)
Q Consensus       271 L~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~~~~--~~~~~iN  348 (448)
                      |+|.++...      ....+.. |..|.+++.....  ...++.+..+. +.++|..+++++.+.++++..  ...|+||
T Consensus       296 l~y~~~~~~------~~p~~~~-p~~p~~~~~~~~~--~~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~w~iN  365 (552)
T 1aoz_A          296 LNYLPNSVS------KLPTSPP-PQTPAWDDFDRSK--NFTYRITAAMG-SPKPPVKFNRRIFLLNTQNVINGYVKWAIN  365 (552)
T ss_dssp             EEETTSCTT------SCCSSCC-CCCCCTTCHHHHH--HHHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEETTEEEEEET
T ss_pred             EEECCCCCC------CCCCCCC-CCCCccccccccc--cccccccccCC-CCCCCCCCcEEEEEEEeeccCCCeEEEEEC
Confidence            999876420      0001111 3444444432211  11244443222 334556788998888765432  3369999


Q ss_pred             ceeeecCChhhhhhhhcCCCCCccCCCCCCCCC-ccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCC---CC
Q 047904          349 NISFVMPTTALFQAHFIGKPNGVYTPDFPTSPL-IPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILG---TE  424 (448)
Q Consensus       349 ~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~---~~  424 (448)
                      |++|..|..|+|.+.+.+++ |.+..+++..++ ..|+.+. +..+...|.++.++.++.|++|||+|+|.+.+.   ..
T Consensus       366 g~s~~~p~~P~L~~~~~~~~-g~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~  443 (552)
T 1aoz_A          366 DVSLALPPTPYLGAMKYNLL-HAFDQNPPPEVFPEDYDIDT-PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSE  443 (552)
T ss_dssp             TEEECCCSSCHHHHHHTTCT-TSSCCSCCCSCCCTTCCTTS-CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCC
T ss_pred             CCccCCCCCCHHHHHhhcCc-cccccCCCcccccccccccc-ccccccccccceEEEecCCCEEEEEEeCCcccccccCC
Confidence            99999999999988887665 666655543322 1233221 111234567788999999999999999976433   56


Q ss_pred             CCCcccCCCceEEEEecCCCCCC
Q 047904          425 SHPLHLHGFNFFVIGQGFGNFNP  447 (448)
Q Consensus       425 ~HP~HLHGh~F~Vl~~G~G~~~~  447 (448)
                      .||||||||+||||++|.|.|++
T Consensus       444 ~HP~HLHGh~F~Vl~~g~G~~~~  466 (552)
T 1aoz_A          444 THPWHLHGHDFWVLGYGDGKFSA  466 (552)
T ss_dssp             CEEEEETTCCEEEEEEEESSCCG
T ss_pred             CCCEEEcCCceEEEecccCccCc
Confidence            79999999999999999999863
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 448
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 1e-20
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 5e-18
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 5e-17
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 1e-15
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 4e-15
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 6e-15
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 1e-13
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 4e-13
d1hfua1131 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin 7e-13
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 1e-11
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 4e-11
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 3e-08
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 7e-08
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 7e-08
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 8e-08
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 4e-07
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 8e-07
d2j5wa1192 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie 9e-07
d1gska1181 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci 2e-06
d1kv7a1140 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch 5e-06
d1mzya1153 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba 1e-05
d2bw4a1157 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige 2e-05
d2j5wa3207 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap 6e-05
d2q9oa3 216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 1e-04
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 0.001
d1sdda1180 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t 0.001
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 0.001
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score = 87.6 bits (216), Expect = 1e-20
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 325 PQNVDRRFFF--TVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLI 382
           P   +RR F   T  +     + ++N++S  +P T    A         +  + P     
Sbjct: 2   PVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYN-LLHAFDQNPPPEVFP 60

Query: 383 PFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILG---TESHPLHLHGFNFFVIG 439
                  PP N     G  +        V++I+Q+ +++    +E+HP HLHG +F+V+G
Sbjct: 61  EDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLG 120

Query: 440 QGFGNFNPN 448
            G G F+  
Sbjct: 121 YGDGKFSAE 129
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query448
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.93
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.93
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.92
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.92
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.92
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.91
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.9
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.9
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.89
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.87
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.83
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.81
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 99.81
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.8
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.76
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.74
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.68
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.65
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.63
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.56
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.51
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.49
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.44
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.43
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.36
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.33
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.22
d2q9oa3 216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.04
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.03
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.02
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.91
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 98.91
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 98.9
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.9
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.87
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 98.84
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 98.67
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.64
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 98.64
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 98.62
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 98.41
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.03
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 97.97
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 97.93
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 97.85
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 97.84
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 97.8
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 97.72
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 97.67
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 97.65
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 97.5
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 97.26
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 96.84
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 96.78
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 96.77
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 96.59
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 96.54
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 96.49
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 96.42
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 96.3
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 96.21
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 96.19
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 96.14
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 96.13
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 96.13
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 95.97
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 95.85
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 95.66
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 95.62
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 95.58
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 95.56
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 95.39
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 95.37
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 95.35
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 95.29
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 95.23
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 95.2
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 95.09
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 95.09
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 95.06
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 94.9
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 94.89
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 94.83
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 94.74
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 94.54
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 93.95
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 93.89
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 93.23
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 92.93
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 91.49
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 91.37
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 90.39
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 89.07
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 88.31
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 86.93
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 83.34
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 81.94
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Melanocarpus albomyces [TaxId: 204285]

Probab=99.93  E-value=9.4e-26  Score=201.72  Aligned_cols=122  Identities=27%  Similarity=0.444  Sum_probs=100.6

Q ss_pred             ccCCCccCCHHHHHHHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcc
Q 047904          118 SAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAG  197 (448)
Q Consensus       118 ~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~  197 (448)
                      +++||+|+...+++... ..+. .+.+|++||||+++  +.|...                                  .
T Consensus         9 ~lsDW~h~~~~~~~~~~-~~~~-~p~~d~~LINGkg~--~~~~~~----------------------------------~   50 (181)
T d2q9oa2           9 PITDYYYRAADDLVHFT-QNNA-PPFSDNVLINGTAV--NPNTGE----------------------------------G   50 (181)
T ss_dssp             EEEEECSSCHHHHHHHH-TTSC-CCCBSEEEETTBCB--CTTTCC----------------------------------B
T ss_pred             EEEecCCCCHHHHHhhc-ccCC-CCCcceEEECCcCC--CCCCCC----------------------------------C
Confidence            78999999988876543 3333 44689999999973  344321                                  1


Q ss_pred             cceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccc----------------
Q 047904          198 RDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGT----------------  261 (448)
Q Consensus       198 ~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~----------------  261 (448)
                      +...++|++||+|||||||+|+.+.+.|+||||+|+|||+||.+++|+.+++|.|++|||||+.                
T Consensus        51 ~~~~~~v~~g~~~rlR~iN~~~~~~~~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~~Y~ir~~~  130 (181)
T d2q9oa2          51 QYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF  130 (181)
T ss_dssp             CCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEEC
T ss_pred             cceEEEECCCCEEEEEEecccCCccEEEEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCccEEEEEec
Confidence            3478999999999999999999999999999999999999999999999999999999999961                


Q ss_pred             --------cCCcceEEEEEEeCCC
Q 047904          262 --------FDNSTVAGILEYERPP  277 (448)
Q Consensus       262 --------~~~~~~~aiL~Y~~~~  277 (448)
                              ..+..+.|||+|++++
T Consensus       131 ~~~~~~~~~~~~~~~ail~Y~ga~  154 (181)
T d2q9oa2         131 GGQAACGGSLNPHPAAIFHYAGAP  154 (181)
T ss_dssp             CGGGTTCCBSSSCCEEEEEETTSC
T ss_pred             cccccccCCCCCceEEEEEECCCC
Confidence                    1134678999998765
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure