Citrus Sinensis ID: 047949

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MNSLVGFRFYPTDEEIICLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDPVYKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKDQPSQNLTSKRKRDQKLGVSISDQDQSSQNLTSKRNHLAEDTNRNHFTRKEDLVSNNNHVTENGVLVSEVQARDHSISHSRNRVSENIVENSVEAEARQLLEFNPQGGGYTGLNDASFSALQSPVYPEQESSCSNGSSYGSGLLNSQFDSEQVDGQFNSWRDFQNKYSPDETGQTTPDFFSSKSDNGVYVEDGVVESGYLGHLDAQVALYHM
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccccEEEEEcccccccccccEEEEEEEEEcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccHHHHcccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHccccccccEEEcEEcccccccccHHHccccccccEEEEEcccccccccccccccHccccEEEEccccccccccccccEEEEEEEEEEEEcccccccccccEEEEEEEccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccHHcccHcccccccccccc
Coil and Loop (DISEMBL)
mnslvgfrfyptDEEIICLLKmkrldpgfsvrtikeidfygfepwelpchseiqseEEVWyffcepdykyakskrvnrgtkegtwkktgngskikrkystevigtkrilsfsrhdsaskkaktEWVMHEIaveddpvykkdFVVCRLERKRDQMKFGVVSAKRKQAkklgvstsdkdqpsqnltskrkrdqklgvsisdqdqssqnltskrnhlaedtnrnhftrkedlvsnnnhvtenGVLVSEVQardhsishsrnrvsenivENSVEAEARQLLefnpqgggytglndasfsalqspvypeqesscsngssygsgllnsqfdseqvdgqfnswrdfqnkyspdetgqttpdffssksdngvyvedgvvesgylghLDAQVALYHM
Flexible Loop (DISEMBL)
mnslvgfrfypTDEEIICLLKmkrldpgfsVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDykyakskrvnrgtkegtwkktgngskikrkystevigtkrilsfsrhdsaskkaktewvmheiaveddpvykKDFVVCRLerkrdqmkfgvvsakrkqakklgvstsdkdqpsqnltskrkrdqklgvsisdqdqssqnltskrnhlaedtnrnhftrkedlvsnnnhVTENGVLVSEVQardhsishsrnrvseniVENSVEAEARQLLEFNPQGGGYTGLNDASFSALQSPVYPEQESSCSNGSSYGSGLLNSQFDSEQVDGQFNSWRDFQNKYSPDETGQTTPDFFSSKSDNGVYVEDGVVESGYLGHLDAQVALYHM
Low Complexity Region (SEG)
MNSLVGFRFYPTDEEIICLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDPVYKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKDQPSQNLTSKRKRDQKLGVSISDQDQSSQNLTSKRNHLAEDTNRNHFTRKEDLVSNNNHVTENGVLVSEVQARDHSISHSRNRVSENIVENSVEAEARQLLEFNPQGGGYTGLNDASFSALQSPVYPEQEsscsngssygsgllnsQFDSEQVDGQFNSWRDFQNKYSPDETGQTTPDFFSSKSDNGVYVEDGVVESGYLGHLDAQVALYHM
Disordered region (IsUnstruct)
***LVGFRFYPTDEEIICLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKS************************YSTEVIGTKRILSF**********KTEWVMHEIAVEDDPVYKKDFVVCRLERKRD*MKFG*************************************************************************************************************************************************************************************************************GVYVEDGVVESGYLGHLDAQVALY**
Disordered Region (DISOPRED)
MNSLVGFRFYPTDEEIICLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDPVYKKDFVVCRLER**********************************************************************************************************************************************************************************QVDGQFNSWRDF*NKYS****GQTTPDFFSSKSDNGVYVEDGVVESGYLGHLDAQVALYHM
Disordered Region (DISEMBL)
MNSLVGFRFYPTDEEIICLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSR*********TEWVMHEIAVEDDPVYKKDFVVCRLERKRDQMKFGV***************************************************KRNHLAEDTNRNHFTRKEDLVSNNNHVTENGVLVSEVQARDHSISHSRNRVSENIVENSVEAEARQLLEFNPQGGGYTGLNDASFSAL*****************YGSGLLNSQFDSEQVDGQFNSWRDFQNKYSPDETGQTTPDFFSSKSDNGVYVEDGVVESGYLGHLDAQVALYHM
Disordered Region (DISPRO)
*NSLVGFRFYPTDEEIICLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDPVYKKDFVVCRLERKRD*********************************************************************HFTRKEDLVSNNNHVTENGVLVSEVQARDHSI*********NIVENSVEAEARQLLEF********************************************FDSEQVDGQFNSWRDFQNKYSPDETGQTTPDFFSSKSDNGVYVEDGVVESGYLGHLDAQVALY**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSLVGFRFYPTDEEIICLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDPVYKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKDQPSQNLTSKRKRDQKLGVSISDQDQSSQNLTSKRNHLAEDTNRNHFTRKEDLVSNNNHVTENGVLVSEVQARDHSISHSRNRVSENIVENSVEAEARQLLEFNPQGGGYTGLNDASFSALQSPVYPEQESSCSNGSSYGSGLLNSQFDSEQVDGQFNSWRDFQNKYSPDETGQTTPDFFSSKSDNGVYVEDGVVESGYLGHLDAQVALYHM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	388	2.2.26 [Sep-21-2011]
Q9FLJ2	336	NAC domain-containing pro	no	no	0.373	0.431	0.424	2e-24
O81914	362	NAC domain-containing pro	no	no	0.404	0.433	0.385	3e-23
Q9FIW5	337	Putative NAC domain-conta	no	no	0.319	0.367	0.445	2e-22
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.443	0.458	0.375	7e-22
Q9FWX2	395	NAC domain-containing pro	no	no	0.368	0.362	0.397	8e-22
Q9ZVH0	418	Protein FEZ OS=Arabidopsi	no	no	0.396	0.368	0.354	8e-22
O81913	359	NAC domain-containing pro	no	no	0.376	0.406	0.419	1e-21
Q5CD17	396	NAC domain-containing pro	no	no	0.363	0.356	0.360	1e-21
Q94F58	340	NAC domain-containing pro	no	no	0.353	0.402	0.405	1e-21
Q9S851	334	Protein CUP-SHAPED COTYLE	no	no	0.389	0.452	0.375	4e-21

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 87/158 (55%), Gaps = 13/158 (8%)

Query: 1   MNSLVGFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEV 59
           M+   GFRF+PTDEE+I   L  K LD  FS + I E+D    EPWELP  +++  +E  
Sbjct: 14  MDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKE-- 71

Query: 60  WYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASK 119
           WYFFC  D KY    R NR T+ G WK TG   +I R  S  ++G K+ L F R   A K
Sbjct: 72  WYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVFYR-GRAPK 128

Query: 120 KAKTEWVMHEIAVED-------DPVYKKDFVVCRLERK 150
             KT WVMHE  +E            K ++V+CR+ +K
Sbjct: 129 GQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQK 166

Arabidopsis thaliana (taxid: 3702)

>sp|O81914|NAC5_ARATH NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2

 Score =  110 bits (274), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 9/166 (5%)

Query: 1   MNSLVGFRFYPTDEEIICL-LKMKRLDPGFSV--RTIKEIDFYGFEPWELPCHSEIQSEE 57
           M + VGFRF PTD EI+ + L+ K L+   S     I  +D   F+PW+LP HS +++ +
Sbjct: 1   MANPVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRD 60

Query: 58  EVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYST-EVIGTKRILSFSRHDS 116
           +VWYFF   + KY K  R  R TK G WKKTG    I RK    E IG KR+L F  H  
Sbjct: 61  QVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVFKNHGG 120

Query: 117 ASKKAKTEWVMHEI-AVEDDPVYKKDFVVCRLERKRDQMKFGVVSA 161
               +K++W MHE  A    P     + +C+++ K ++ +F V + 
Sbjct: 121 ----SKSDWAMHEYHATFSSPNQIMTYTLCKVKFKGERREFSVATG 162

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=4 SV=1

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 4/128 (3%)

Query: 4   LVGFRFYPTDEEIICL-LKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYF 62
           L GFRF+PTDEE++   LK K L        IK++D Y ++PW+LP  + +  +E  WYF
Sbjct: 21  LPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKE--WYF 78

Query: 63  FCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAK 122
           +C  D KY  S R NR T  G WK TG    I    ST  IG K+ L F R   A+K  K
Sbjct: 79  YCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYR-GRAAKGVK 137

Query: 123 TEWVMHEI 130
           T+W+MHE 
Sbjct: 138 TDWMMHEF 145

Arabidopsis thaliana (taxid: 3702)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score =  105 bits (261), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 93/184 (50%), Gaps = 12/184 (6%)

Query: 6   GFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEE+I   L  K LD  FS R I E+D    EPW+LP  +++  +E  WYFF 
Sbjct: 20  GFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKE--WYFFS 77

Query: 65  EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
             D KY    R NR T+ G WK TG   +I    +  ++G K+ L F +   A K  K+ 
Sbjct: 78  LRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYK-GRAPKGEKSN 136

Query: 125 WVMHEIAVEDDPVY-------KKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKD 177
           WVMHE  +E    Y       K ++V+ R+ +K      G VS +        VS S   
Sbjct: 137 WVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVS-EGGGGGGATVSVSSGT 195

Query: 178 QPSQ 181
            PS+
Sbjct: 196 GPSK 199

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score =  105 bits (261), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 8/151 (5%)

Query: 6   GFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEV-WYFF 63
           GFRF+PTDEE++   L+ K       +  IK+ID Y  EPW+L    +I  EE+  WYFF
Sbjct: 10  GFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFF 69

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
              D KY    R NR TK G WK TG    I  ++S  +IG ++ L F +   A    K+
Sbjct: 70  SHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHS--LIGMRKTLVFYK-GRAPNGQKS 126

Query: 124 EWVMHEIAVEDD---PVYKKDFVVCRLERKR 151
           +W+MHE  +E D      ++ +VVCR+ +KR
Sbjct: 127 DWIMHEYRLETDENGTPQEEGWVVCRVFKKR 157

Transcription factor probably involved in xylem formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVH0|FEZ_ARATH Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1

 Score =  105 bits (261), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 18/172 (10%)

Query: 4   LVGFRFYPTDEEIICL-LKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYF 62
           L GFRF+PTDEE++   LK K      S+  I+++D Y ++PW+LP  +   + E+ WYF
Sbjct: 17  LPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFA--MTGEKEWYF 74

Query: 63  FCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAK 122
           +C  D KY  S R NR T  G WK TG    I      + IG K+ L F +   A+K  K
Sbjct: 75  YCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYK-GRAAKGVK 133

Query: 123 TEWVMHEIAVE-------------DDPVYKKD-FVVCRLERKRDQMKFGVVS 160
           T+W+MHE  +              D PV   D + +CR+ +K +      +S
Sbjct: 134 TDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLRALS 185

Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane.

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score =  104 bits (260), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 82/155 (52%), Gaps = 9/155 (5%)

Query: 1   MNSLVGFRFYPTDEEII-CLLKMKRLDPGFSV--RTIKEIDFYGFEPWELPCHSEIQSEE 57
           M + VGFRF P DEEI+   L+ K LD   S     I  +D   FEPW+LP  S I+S +
Sbjct: 1   MMNPVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRD 60

Query: 58  EVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYST-EVIGTKRILSFSRHDS 116
            VWYFF   + KY +  +  R T  G WKKTG    + RK    E IG KR+L F   D 
Sbjct: 61  GVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDG 120

Query: 117 ASKKAKTEWVMHEI-AVEDDPVYKKDFVVCRLERK 150
               +KT+WVMHE  A    P     + VC++E K
Sbjct: 121 ----SKTDWVMHEYHATSLFPNQMMTYTVCKVEFK 151

Arabidopsis thaliana (taxid: 3702)

>sp|Q5CD17|NAC77_ORYSJ NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2

 Score =  104 bits (260), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 86/172 (50%), Gaps = 31/172 (18%)

Query: 6   GFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTD E+I   L  K L+P F+   I E+D    EPW+LP  +++  +E  WYFF 
Sbjct: 22  GFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKE--WYFFS 79

Query: 65  EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYST--------------EVIGTKRILS 110
             D KY    R NR TKEG WK TG   +I R+ +               +++G K+ L 
Sbjct: 80  HKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLV 139

Query: 111 FSRHDSASKKAKTEWVMHEIAVED-----------DPVYKKDFVVCRLERKR 151
           F     A K  KT WVMHE  +             +P  K ++VVC++  K+
Sbjct: 140 FYM-GRAPKGTKTNWVMHEFRLHANLHNHHPNLRLNP--KDEWVVCKVFHKK 188

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q94F58|NAC89_ARATH NAC domain-containing protein 89 OS=Arabidopsis thaliana GN=NAC089 PE=1 SV=1

 Score =  104 bits (259), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 16/153 (10%)

Query: 6   GFRFYPTDEEIICLLKMKRLDPGF--SVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
           GF+F PTD E+I     +++D G   SV  I +++ Y FEPW+LP  S ++S+ E W+FF
Sbjct: 24  GFKFSPTDVELISYYLKRKMD-GLERSVEVIPDLEIYNFEPWDLPDKSIVKSDSE-WFFF 81

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
           C    KY    +  R TK G WK TG    +K    +EVIGTKR L F     A K  +T
Sbjct: 82  CARGKKYPHGSQNRRATKMGYWKATGKERDVKS--GSEVIGTKRTLVF-HIGRAPKGERT 138

Query: 124 EWVMHEIAVE----DDPVYKKDFVVCRLERKRD 152
           +W+MHE  V+    DD +     VVCR+ R ++
Sbjct: 139 DWIMHEYCVKGVSLDDAM-----VVCRVRRNKE 166

Transcription factor involved in plant cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S851|NAC31_ARATH Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1

 Score =  102 bits (255), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 87/160 (54%), Gaps = 9/160 (5%)

Query: 6   GFRFYPTDEEIICL-LKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEE+I   L  K    G S   I E+D    EPWELP  +++   E  WYF+ 
Sbjct: 25  GFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGERE--WYFYS 82

Query: 65  EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
             D KY    R NR T  G WK TG   ++      +++G K+ L F +   A +  KT+
Sbjct: 83  LRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYK-GRAPRGLKTK 141

Query: 125 WVMHEIAVEDDPVY----KKDFVVCRLERKR-DQMKFGVV 159
           WVMHE  +E+D  +    K+++V+CR+  K  D+   G++
Sbjct: 142 WVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRKNVGLI 181

Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
296089037	335	unnamed protein product [Vitis vinifera]	0.378	0.438	0.460	1e-30
225453680	560	PREDICTED: uncharacterized protein LOC10	0.378	0.262	0.460	1e-30
356560207	1061	PREDICTED: uncharacterized protein LOC10	0.402	0.147	0.455	2e-28
356522462	497	PREDICTED: NAC domain-containing protein	0.438	0.342	0.417	5e-28
224130704	464	NAC domain protein, IPR003441 [Populus t	0.546	0.456	0.345	7e-27
359474569	365	PREDICTED: NAC domain-containing protein	0.512	0.545	0.356	6e-25
147765514	365	hypothetical protein VITISV_004432 [Viti	0.512	0.545	0.356	6e-25
326498737	405	predicted protein [Hordeum vulgare subsp	0.373	0.358	0.415	7e-25
147843196	1537	hypothetical protein VITISV_005910 [Viti	0.378	0.095	0.434	1e-24
359489481	997	PREDICTED: uncharacterized protein LOC10	0.378	0.147	0.434	1e-24

>gi|296089037|emb|CBI38740.3| unnamed protein product [Vitis vinifera]

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 94/152 (61%), Gaps = 5/152 (3%)

Query: 5   VGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF+PTDEE++   LK+K L     V  I E+D   +EPW+LP  S IQ+ +  W+FF
Sbjct: 8   VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDVCKWEPWDLPVLSVIQTNDPEWFFF 67

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
           C PDYKY   +R NR T+ G WK TG    IK + + E++GTK+ L F R   A +  +T
Sbjct: 68  CPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYR-GRAPQSVRT 126

Query: 124 EWVMHE--IAVEDDPVYKKDFVVCRLERKRDQ 153
            WVMHE   A+   P   K +V+CRL+RK D+
Sbjct: 127 NWVMHEYRAAIASLPA-NKAYVLCRLKRKTDE 157

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453680|ref|XP_002268892.1| PREDICTED: uncharacterized protein LOC100252386 [Vitis vinifera]

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/152 (46%), Positives = 94/152 (61%), Gaps = 5/152 (3%)

Query: 5   VGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF+PTDEE++   LK+K L     V  I E+D   +EPW+LP  S IQ+ +  W+FF
Sbjct: 16  VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDVCKWEPWDLPVLSVIQTNDPEWFFF 75

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
           C PDYKY   +R NR T+ G WK TG    IK + + E++GTK+ L F R   A +  +T
Sbjct: 76  CPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYR-GRAPQSVRT 134

Query: 124 EWVMHE--IAVEDDPVYKKDFVVCRLERKRDQ 153
            WVMHE   A+   P   K +V+CRL+RK D+
Sbjct: 135 NWVMHEYRAAIASLPA-NKAYVLCRLKRKTDE 165

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560207|ref|XP_003548385.1| PREDICTED: uncharacterized protein LOC100778755 [Glycine max]

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 93/158 (58%), Gaps = 2/158 (1%)

Query: 5   VGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF PTDEE++   LK K L   F V  I EID    EPW++P  S I+S++  W+FF
Sbjct: 13  VGFRFRPTDEELVDYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPGRSVIKSDDPEWFFF 72

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
              DYKY KSKR NR TK G WK TGN  KI+   ++ VIGTK+ L F       + AKT
Sbjct: 73  SPVDYKYLKSKRFNRTTKRGFWKATGNDRKIRIPGTSNVIGTKKTLVF-HQGRVPRGAKT 131

Query: 124 EWVMHEIAVEDDPVYKKDFVVCRLERKRDQMKFGVVSA 161
            WV+HE         ++ FV+CRL +K ++   G + A
Sbjct: 132 NWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGIEA 169

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522462|ref|XP_003529865.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 100/182 (54%), Gaps = 12/182 (6%)

Query: 5   VGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
           VGFRF PTDEE++   LK K L   F V  I EID    EPW++P  S I+S++  W+FF
Sbjct: 14  VGFRFRPTDEELVNYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPERSVIKSDDPEWFFF 73

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
              DYKY KSKR NR TK G WK TGN   +K   ++ VIGTK+ L F       +  KT
Sbjct: 74  SPVDYKYLKSKRFNRTTKRGYWKTTGNDRNVKIPGTSNVIGTKKTLVF-HEGRGPRGVKT 132

Query: 124 EWVMHEIAVEDDPVYKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKDQPSQNL 183
            WV+HE         ++ FV+CRL +K          A++K    +   T D+ +PS +L
Sbjct: 133 NWVIHEYHAVTSHESQRAFVLCRLMKK----------AEKKNEGGIEAPTFDEGEPSVHL 182

Query: 184 TS 185
            S
Sbjct: 183 FS 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130704|ref|XP_002320907.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222861680|gb|EEE99222.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 129/243 (53%), Gaps = 31/243 (12%)

Query: 5   VGFRFYPTDEEII---CLLKMKRLDPGFSVRTIKEID-FYGFEPWELPCHSEIQSEEEVW 60
           VG+RF+PT+EEII      K+  LD       I EID  Y ++PW+LP    IQS + VW
Sbjct: 4   VGYRFHPTEEEIIDHYLSCKLNGLD-SLVDAYIGEIDHLYQWDPWDLPV---IQSNDRVW 59

Query: 61  YFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKK 120
           YFFC  DYK+  SKRVNR TK G WK TG    I R+ + EVIGTK+ L F      SK 
Sbjct: 60  YFFCRHDYKFPNSKRVNRTTKNGNWKLTGKVRNITRRGTNEVIGTKKNLVFLHKCPDSK- 118

Query: 121 AKTEWVMHEIAVEDDPVYKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKDQPS 180
            KT WV+HE   +  P  ++  V+C+L+ K D                   + S  D+ +
Sbjct: 119 -KTRWVIHEFQAKTPPPDERAIVLCKLKNKADD----------------SAANSPNDEGA 161

Query: 181 QNLTSKRKRDQKLGVSISDQDQSS-----QNLTSKRNHLAEDTNRNHFTRKEDLVSNNNH 235
           +    +   +Q+L +  S ++ S+     Q+L + +N+L+++ + N  +  + L++  N+
Sbjct: 162 ETNILEVDAEQRLSLFNSQREDSNFPSPLQSLINAQNYLSDEEDFNFPSPLQSLINAQNY 221

Query: 236 VTE 238
            ++
Sbjct: 222 FSD 224

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474569|ref|XP_002280894.2| PREDICTED: NAC domain-containing protein 68-like [Vitis vinifera] gi|297742117|emb|CBI33904.3| unnamed protein product [Vitis vinifera]

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 20/219 (9%)

Query: 6   GFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEE++   LK K     F +  I  ID Y F+PWELP  S +   +  W+FFC
Sbjct: 9   GFRFHPTDEELVGYYLKRKVEGQKFELEVIPVIDLYKFDPWELPDKSFLPKRDMEWFFFC 68

Query: 65  EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
             D KY    R NR T+ G WK TG   K+    ST VIG ++ L F R   A    +T+
Sbjct: 69  PRDRKYPNGSRTNRATRAGYWKATGKDRKVVACQST-VIGYRKTLVFYR-GRAPLGDRTD 126

Query: 125 WVMHEIAVEDDPV----YKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKDQPS 180
           WVMHE  + DDP     ++  F +CR+ +K D  +         + K++G S+S+ D  S
Sbjct: 127 WVMHEYRLCDDPSQGSGFQGAFALCRVVKKNDPTQKSSDFHGEAKGKQVGSSSSNGDFTS 186

Query: 181 QNLTSKRKRDQKLGVSISDQDQSSQNLTSKRNHLAEDTN 219
             ++++        +SISD      N+ S+ +H   ++N
Sbjct: 187 AAISNEI-------LSISD------NIPSQASHAYNESN 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147765514|emb|CAN78113.1| hypothetical protein VITISV_004432 [Vitis vinifera]

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 20/219 (9%)

Query: 6   GFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEE++   LK K     F +  I  ID Y F+PWELP  S +   +  W+FFC
Sbjct: 9   GFRFHPTDEELVGYYLKRKVEGQKFELEVIPVIDLYKFDPWELPDKSFLPKRDMEWFFFC 68

Query: 65  EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
             D KY    R NR T+ G WK TG   K+    ST VIG ++ L F R   A    +T+
Sbjct: 69  PRDRKYPNGSRTNRATRAGYWKATGKDRKVVACQST-VIGYRKTLVFYR-GRAPLGDRTD 126

Query: 125 WVMHEIAVEDDPV----YKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKDQPS 180
           WVMHE  + DDP     ++  F +CR+ +K D  +         + K++G S+S+ D  S
Sbjct: 127 WVMHEYRLCDDPSQGSGFQGAFALCRVVKKNDPTQKSSDFHGEAKGKQVGSSSSNGDFTS 186

Query: 181 QNLTSKRKRDQKLGVSISDQDQSSQNLTSKRNHLAEDTN 219
             ++++        +SISD      N+ S+ +H   ++N
Sbjct: 187 AAISNEI-------LSISD------NIPSQASHAYNESN 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326498737|dbj|BAK02354.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 91/159 (57%), Gaps = 14/159 (8%)

Query: 6   GFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
           GFRF+PTDEEII C L  K LDP F  R + E+D    EP +LP  + +  +E  WYFF 
Sbjct: 25  GFRFHPTDEEIITCYLLRKFLDPSFVSRAVGEVDLNSCEPRDLPGKANMGEKE--WYFFV 82

Query: 65  EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
             D KY    R NR TKEG WK TG   +I +  + E++G K+ L F     A + AK+E
Sbjct: 83  HKDLKYPTGSRANRATKEGYWKATGKDREIFKPRARELVGMKKTLVF-YTGRAPRGAKSE 141

Query: 125 WVMHEIAVE--------DDPVYKKDFVVCRLERKRDQMK 155
           WVMHE  ++        ++P  K ++VVC++  K+ + K
Sbjct: 142 WVMHEFRLQGKSRDQTMNNP--KDEWVVCKVFNKKGEAK 178

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843196|emb|CAN80540.1| hypothetical protein VITISV_005910 [Vitis vinifera]

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 5/152 (3%)

Query: 5   VGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
           VGFRFYPTDEE++   LK+K L     V  I E+D   +EPWELP  S I++++  W+FF
Sbjct: 11  VGFRFYPTDEELVDNHLKLKILGMESPVDIIPEVDICKWEPWELPVFSVIKTDDPEWFFF 70

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
              DYKY+   R NR T  G WK TG    I    + EVIGTK+ L F R        +T
Sbjct: 71  SLLDYKYSNGSRSNRATSAGYWKPTGQDRDIFSGTNKEVIGTKKTLVFYR-GRGRGAIRT 129

Query: 124 EWVMHE--IAVEDDPVYKKDFVVCRLERKRDQ 153
            WV+HE    +   P   + +V+CRL+RK D+
Sbjct: 130 NWVIHEYRANIAGLPA-NRAYVLCRLKRKTDE 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489481|ref|XP_002268822.2| PREDICTED: uncharacterized protein LOC100262652 [Vitis vinifera]

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 5/152 (3%)

Query: 5   VGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
           VGFRFYPTDEE++   LK+K L     V  I E+D   +EPWELP  S I++++  W+FF
Sbjct: 16  VGFRFYPTDEELVDNHLKLKILGMESPVDIIPEVDICKWEPWELPVFSVIKTDDPEWFFF 75

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
              DYKY+   R NR T  G WK TG    I    + EVIGTK+ L F R        +T
Sbjct: 76  SLLDYKYSNGSRSNRATSAGYWKPTGQDRDIFSGTNKEVIGTKKTLVFYR-GRGRGAIRT 134

Query: 124 EWVMHE--IAVEDDPVYKKDFVVCRLERKRDQ 153
            WV+HE    +   P   + +V+CRL+RK D+
Sbjct: 135 NWVIHEYRANIAGLPA-NRAYVLCRLKRKTDE 165

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
TAIR|locus:2114678	469	NAC062 "NAC domain containing	0.438	0.362	0.388	3.5e-28
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.378	0.465	0.393	1.4e-27
TAIR|locus:2196641	305	NAC015 "NAC domain containing	0.384	0.488	0.397	9.4e-27
TAIR|locus:2128013	534	NTL9 "NAC transcription factor	0.404	0.294	0.413	3.7e-26
TAIR|locus:2163153	336	NAC100 "NAC domain containing	0.685	0.791	0.325	6.6e-26
TAIR|locus:2160324	329	NAC080 "NAC domain containing	0.360	0.425	0.444	2.9e-25
TAIR|locus:2153899	451	TIP "TCV-interacting protein"	0.376	0.323	0.441	3.1e-25
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.469	0.623	0.364	5.9e-25
TAIR|locus:2141075	262	NAC071 "NAC domain containing	0.445	0.660	0.366	7.6e-25
TAIR|locus:2122804	341	NAC070 "NAC domain containing	0.378	0.431	0.394	1.5e-24

TAIR|locus:2114678 NAC062 "NAC domain containing protein 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
 Identities = 70/180 (38%), Positives = 99/180 (55%)

Query:     1 MNSL-VGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEE 58
             M+SL VG RF PTDEE+I   L+ K       V+ I+EID   +EPW+LP  S I++++ 
Sbjct:    10 MDSLPVGLRFRPTDEELIRYYLRRKINGHDDDVKAIREIDICKWEPWDLPDFSVIKTKDS 69

Query:    59 VWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSAS 118
              W +FC  D KY    R NR T  G WK TG   KIK    T +IG KR L F     A 
Sbjct:    70 EWLYFCPLDRKYPSGSRQNRATVAGYWKATGKDRKIKSG-KTNIIGVKRTLVFHA-GRAP 127

Query:   119 KKAKTEWVMHEI-AVEDD----PVYKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVST 173
             +  +T W++HE  A EDD       +  FV+C+L +K +++  G   +K  + ++  VS+
Sbjct:   128 RGTRTNWIIHEYRATEDDLSGTNPGQSPFVICKLFKK-EELVLGEEDSKSDEVEEPAVSS 186

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009814 "defense response, incompatible interaction" evidence=IMP

GO:0070417 "cellular response to cold" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
 Identities = 61/155 (39%), Positives = 87/155 (56%)

Query:     6 GFRFYPTDEEIICLLKMKRL-DPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF+PTDEE+I    + ++ D  F+ + I ++D    EPWELP  +++  +E  WYFF 
Sbjct:    19 GFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMGGKE--WYFFS 76

Query:    65 EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
               D KY    R NR T  G WK TG   +I    ++E++G K+ L F R   A +  KT 
Sbjct:    77 LRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYR-GRAPRGEKTC 135

Query:   125 WVMHEIAVEDDPVY---KKD-FVVCRLERKRDQMK 155
             WVMHE  +     Y   K+D +VVCR+ +K +  K
Sbjct:   136 WVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATK 170

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2196641 NAC015 "NAC domain containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
 Identities = 62/156 (39%), Positives = 83/156 (53%)

Query:     6 GFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSE-EEVWYFF 63
             GFRF+PTDEE++   LK K     F +  IKE+D    EPW+L    +I S  +  WYFF
Sbjct:    11 GFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEWYFF 70

Query:    64 CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
                D KY    R NR T  G WK TG    I+  Y    IG ++ L F +   A    KT
Sbjct:    71 SHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKK--IGMRKTLVFYK-GRAPHGQKT 127

Query:   124 EWVMHEIAVED--DPVYKKDFVVCRLERKRDQMKFG 157
             +W+MHE  +ED  D   +  +VVCR+ +K++  K G
Sbjct:   128 DWIMHEYRIEDTEDDPCEDGWVVCRVFKKKNLFKVG 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2128013 NTL9 "NAC transcription factor-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
 Identities = 69/167 (41%), Positives = 92/167 (55%)

Query:     1 MNSL-VGFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEE 58
             M SL +GFRF PTDEE++   L++K       VR I +ID   +EPW+LP  S I++++ 
Sbjct:     6 MESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVIKTDDP 65

Query:    59 VWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSAS 118
              W+FFC  D KY    R NR T  G WK TG    IK K +  +IG K+ L F R   A 
Sbjct:    66 EWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKT--LIGMKKTLVFYR-GRAP 122

Query:   119 KKAKTEWVMHEI--AVED-DPVY--KKDFVVCRLERKRDQMKFGVVS 160
             K  +T W+MHE    ++D D     +  +V+CRL  K D    GV S
Sbjct:   123 KGERTNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDRVNGVKS 169

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0031347 "regulation of defense response" evidence=IMP

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0008284 "positive regulation of cell proliferation" evidence=RCA

TAIR|locus:2163153 NAC100 "NAC domain containing protein 100" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 95/292 (32%), Positives = 135/292 (46%)

Query:     6 GFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF+PTDEE+I   L  K LD  FS + I E+D    EPWELP  +++  +E  WYFFC
Sbjct:    19 GFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKE--WYFFC 76

Query:    65 EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
               D KY    R NR T+ G WK TG   +I R  S  ++G K+ L F R   A K  KT 
Sbjct:    77 VRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVFYR-GRAPKGQKTN 133

Query:   125 WVMHEIAVEDD------P-VYKKDFVVCRL-ERKRDQMKFGVVSAKRKQAKKLGVSTSDK 176
             WVMHE  +E        P   K ++V+CR+ ++     K  + S  R     LG   +  
Sbjct:   134 WVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIPISSLIR--IGSLGTDFNPS 191

Query:   177 DQPSQNLTS----KRKRDQKLGVSISDQDQSSQNLTSK--RNHLAEDTNRNHFTRKEDLV 230
               PS   +S    K K +       S+Q   +Q  T     + +      + F R     
Sbjct:   192 LLPSLTDSSPYNDKTKTEPVYVPCFSNQTDQNQGTTLNCFSSPVLNSIQADIFHRIPLYQ 251

Query:   231 SNNNHVTENGVLVSEVQARDHSISHS--RNRVSENIVENSVEAEARQLLEFN 280
             + +  V+ N  L S V  ++HS+ H+   N   +++   SV  E     + N
Sbjct:   252 TQSLQVSMN--LQSPVLTQEHSVLHAMIENNRRQSLKTMSVSQETGVSTDMN 301

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2160324 NAC080 "NAC domain containing protein 80" [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 68/153 (44%), Positives = 87/153 (56%)

Query:     6 GFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF+PTDEE+I   L  K LD GFS + I E+D    EPWELP  ++I  +E  WYFFC
Sbjct:    20 GFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKE--WYFFC 77

Query:    65 EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
               D KY    R NR T+ G WK TG   +I R  S  ++G K+ L F R   A K  KT 
Sbjct:    78 VRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFYR-GRAPKGQKTN 134

Query:   125 WVMHE------IAVEDDP-VYKKDFVVCRLERK 150
             WVMHE      ++  + P   K ++V+CR+  K
Sbjct:   135 WVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHK 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2153899 TIP "TCV-interacting protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 3.1e-25, P = 3.1e-25
 Identities = 68/154 (44%), Positives = 87/154 (56%)

Query:     5 VGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
             VGFRF PTDEE++   L++K       VR I+EID   +EPW+LP  S +++ +  W FF
Sbjct:    15 VGFRFSPTDEELVRYYLRLKINGHDNDVRVIREIDICKWEPWDLPDFSVVKTTDSEWLFF 74

Query:    64 CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
             C  D KY    R+NR T  G WK TG   KIK    T++IG KR L F     A K  +T
Sbjct:    75 CPLDRKYPSGSRMNRATVAGYWKATGKDRKIKSG-KTKIIGVKRTLVFYT-GRAPKGTRT 132

Query:   124 EWVMHEI-AVEDDPVYKKD----FVVCRLERKRD 152
              W+MHE  A E D    K     FVVC+L +K+D
Sbjct:   133 CWIMHEYRATEKDLDGTKSGQNPFVVCKLFKKQD 166

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0051607 "defense response to virus" evidence=IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 71/195 (36%), Positives = 100/195 (51%)

Query:     6 GFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
             GFRF+PTDEE+I   LK K       +  I  ID Y F+PWELP  S + + +  WYFFC
Sbjct:     9 GFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDMEWYFFC 68

Query:    65 EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTE 124
               D KY    R NRGTK G WK TG   KI  + S+ +IG ++ L F +   A    ++ 
Sbjct:    69 SRDKKYPNGFRTNRGTKAGYWKATGKDRKITSR-SSSIIGYRKTLVFYK-GRAPLGDRSN 126

Query:   125 WVMHEIAVEDDPV------YKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLGVSTSDKDQ 178
             W+MHE  + DD         K  FV+CR+  K +++K      K    + +G  + +   
Sbjct:   127 WIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMK-NEIKTNTKIRKIPSEQTIG--SGESSG 183

Query:   179 PSQNLTSKRKRDQKL 193
              S  +TS   RD+ +
Sbjct:   184 LSSRVTSP-SRDETM 197

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2141075 NAC071 "NAC domain containing protein 71" [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 70/191 (36%), Positives = 101/191 (52%)

Query:     6 GFRFYPTDEEIICLLKMKRLDPGFSVR--TIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
             GFRF+PTDEE+I     ++++ G  +    I  ID Y F+PWELP  S + + +  W+FF
Sbjct:     9 GFRFHPTDEELIGYYLSRKIE-GLEIELEVIPVIDLYKFDPWELPGKSFLPNRDLEWFFF 67

Query:    64 CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
             C  D KYA   R NR TK G WK TG   KI  K S  + G ++ L F     A    +T
Sbjct:    68 CPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYE-GRAPLGDRT 126

Query:   124 EWVMHEIA---VED----DPVYKKDFVVCRLERKRDQMKFGVVSAKRKQAKKLG-----V 171
              W MHE     ++D     P +K  F +CR+ +K +++K    S K K  + +G     +
Sbjct:   127 NWFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKK-NELKKNSKSLKNKNEQDIGSCYSSL 185

Query:   172 STSD-KDQPSQ 181
             +TS  +D+ SQ
Sbjct:   186 ATSPCRDEASQ 196

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2122804 NAC070 "NAC domain containing protein 70" [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
 Identities = 62/157 (39%), Positives = 83/157 (52%)

Query:     6 GFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSE-EEVWYFF 63
             GFRF+PTDEE++   LK K     F +  I+E+D    EPW+L    +I S  +  WYFF
Sbjct:    12 GFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNEWYFF 71

Query:    64 CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
                D KY    R NR T  G WK TG    I+  Y    IG ++ L F +   A    KT
Sbjct:    72 SHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKK--IGMRKTLVFYK-GRAPHGQKT 128

Query:   124 EWVMHEIAVED--DPVYK--KD-FVVCRLERKRDQMK 155
             +W+MHE  +ED  DP     +D +VVCR+  K++  K
Sbjct:   129 DWIMHEYRLEDADDPQANPSEDGWVVCRVFMKKNLFK 165

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	388
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-42

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  144 bits (366), Expect = 2e-42
 Identities = 55/128 (42%), Positives = 69/128 (53%), Gaps = 5/128 (3%)

Query: 4   LVGFRFYPTDEEIIC-LLKMKRLDPGFSV-RTIKEIDFYGFEPWELPCHSEIQSEEEVWY 61
             GFRF+PTDEE++   LK K L     +   I E+D Y FEPW+LP   + +  +  WY
Sbjct: 2   PPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREWY 60

Query: 62  FFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKA 121
           FF   D KY    R NR T  G WK TG    +  K   EV+G K+ L F +   A K  
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGG-EVVGMKKTLVFYKGR-APKGE 118

Query: 122 KTEWVMHE 129
           KT+WVMHE
Sbjct: 119 KTDWVMHE 126

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	388
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.1e-42  Score=298.96  Aligned_cols=127  Identities=42%  Similarity=0.734  Sum_probs=95.2

Q ss_pred             CCCCceecCCHHHHHH-HHHHhHcCCCCCc-ccEEeccCCCCCCCCCCCCCcccCCCceEEEeecccccccCCCccccCC
Q 047949            3 SLVGFRFYPTDEEIIC-LLKMKRLDPGFSV-RTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRGT   80 (388)
Q Consensus         3 LPpGFRF~PTDEELV~-YL~~Ki~G~plp~-~~I~evDVY~~ePWdLP~~s~~~g~d~eWYFFspr~rKy~nG~R~nRaT   80 (388)
                      |||||||+|||+|||. ||++|+.|.+++. .+|+++|||++|||+||+.  ..+++++||||+++.++++++.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~--~~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAK--FKGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHH--SSS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhh--ccCCCceEEEEEecccccCCcccccccc
Confidence            8999999999999999 9999999999887 7999999999999999942  2234789999999999999999999999


Q ss_pred             CCceEEecCCCceEEeCCCceEEEEEEEEEEEeecCCCCCCCcCeEEEEEEeC
Q 047949           81 KEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVE  133 (388)
Q Consensus        81 g~GyWKatGkdk~I~~~~~g~vIG~KKTLvFY~~Grap~G~KT~WvMhEYrL~  133 (388)
                      ++|+||++|+.++|... ++.+||+|++|+||. ++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~-~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFYS-GKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE--TTCEEEEEEEEEEEE-SSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccc-cceeeeeEEEEEEEe-ccCCCCCcCCeEEEEEEeC
Confidence            99999999999999996 448999999999998 8888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	388
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		5e-19
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		7e-19
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		1e-17

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 6   GFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
           GFRFYPTDEE++   L  K     FS++ I EID Y F+PW LP  +    +E  WYFF 
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFFS 77
Query: 65  EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTE--VIGTKRILSFSRHDSASKKAK 122
             D KY    R NR    G WK TG    I    STE   +G K+ L F     A K  K
Sbjct: 78  PRDRKYPNGSRPNRVAGSGYWKATGTDKII----STEGQRVGIKKALVFY-IGKAPKGTK 132
Query: 123 TEWVMHEIAV-----EDDPVYKKDFVVCRLERKR 151
           T W+MHE  +      +      D+V+CR+ +K+
Sbjct: 133 TNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 6   GFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFC 64
           GFRFYPTDEE++   L  K     FS++ I EID Y F+PW LP  +    +E  WYFF 
Sbjct: 23  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFFS 80
Query: 65  EPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTE--VIGTKRILSFSRHDSASKKAK 122
             D KY    R NR    G WK TG    I    STE   +G K+ L F     A K  K
Sbjct: 81  PRDRKYPNGSRPNRVAGSGYWKATGTDKII----STEGQRVGIKKALVFY-IGKAPKGTK 135
Query: 123 TEWVMHEIAV-----EDDPVYKKDFVVCRLERKR 151
           T W+MHE  +      +      D+V+CR+ +K+
Sbjct: 136 TNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 169

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 1   MNSLVGFRFYPTDEEII-CLLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEV 59
           +N   GFRF+PTD+E++   L  K       V  I E+D Y F+PW+LP  +   + E  
Sbjct: 13  LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE-- 70
Query: 60  WYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASK 119
           WYFF   D KY    R NR    G WK TG    +  +  T  +G K+ L F     A +
Sbjct: 71  WYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRT--LGIKKALVFY-AGKAPR 127
Query: 120 KAKTEWVMHEIAVEDDPVYKK----------DFVVCRLERKRDQ 153
             KT+W+MHE  + D                D+V+CRL  K+++
Sbjct: 128 GVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	388
1ut7_A	171	No apical meristem protein; transcription regulati	2e-45
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-44
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  153 bits (388), Expect = 2e-45
 Identities = 58/157 (36%), Positives = 77/157 (49%), Gaps = 11/157 (7%)

Query: 5   VGFRFYPTDEEIICL-LKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
            GFRFYPTDEE++   L  K     FS++ I EID Y F+PW LP  +    +E  WYFF
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFF 76

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
              D KY    R NR    G WK TG    I      + +G K+ L F     A K  KT
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIG-KAPKGTKT 133

Query: 124 EWVMHE-----IAVEDDPVYKKDFVVCRLERKRDQMK 155
            W+MHE      +  +      D+V+CR+ +K+   +
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 170

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  150 bits (382), Expect = 1e-44
 Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 16/162 (9%)

Query: 5   VGFRFYPTDEEIICL-LKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
            GFRF+PTD+E++   L  K       V  I E+D Y F+PW+LP  +   + E  WYFF
Sbjct: 17  PGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE--WYFF 74

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
              D KY    R NR    G WK TG    +        +G K+ L F     A +  KT
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP--RGRTLGIKKALVFYA-GKAPRGVKT 131

Query: 124 EWVMHEIAVEDDPVYKK----------DFVVCRLERKRDQMK 155
           +W+MHE  + D                D+V+CRL  K+++ +
Sbjct: 132 DWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWE 173

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 4e-06
 Identities = 49/363 (13%), Positives = 100/363 (27%), Gaps = 103/363 (28%)

Query: 30  SVRTIKEIDFYGFEP----------WELPCHSEIQSEEEVWYFF---CEPDYKYAKSKRV 76
           S+ + +EID                W L      + EE V  F       +YK+  S  +
Sbjct: 44  SILSKEEIDHIIMSKDAVSGTLRLFWTL----LSKQEEMVQKFVEEVLRINYKFLMS-PI 98

Query: 77  NRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDP 136
               ++ +        +  R Y+   +  K   + SR        +    + +  +E  P
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY--NVSRL-------QPYLKLRQALLELRP 149

Query: 137 -----VY------KKDFV--VCRLERKRDQMKFGV--VSAKRKQAKKLGVSTSDKD--QP 179
                +       K      VC   + + +M F +  ++        L    S +   + 
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN--------LKNCNSPETVLEM 201

Query: 180 SQNLTSKRKRDQKLGVSISDQDQSSQNLTSKRNHLAEDTNRNHFTRKE--------DLVS 231
            Q L        ++  + + +   S N+   R H  +   R     K           V 
Sbjct: 202 LQKLLY------QIDPNWTSRSDHSSNIKL-RIHSIQAELRRLLKSKPYENCLLVLLNVQ 254

Query: 232 NNNHVT--ENG--VLVSEVQARDHSI------SHSRNRVSENIVENSVEAEARQLLEFNP 281
           N            +L++    R   +      + + +   ++        E + LL    
Sbjct: 255 NAKAWNAFNLSCKILLT---TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL---- 307

Query: 282 QGGGYTGLNDASFSALQSPVYPEQESSCSNGSSYGSGLLNSQFDSEQVDG--QFNSWRDF 339
               Y          L     P +  +        +    S       DG   +++W+  
Sbjct: 308 --LKYLDC---RPQDL-----PREVLT-------TNPRRLSIIAESIRDGLATWDNWKHV 350

Query: 340 QNK 342
              
Sbjct: 351 NCD 353

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	388
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1e-54  Score=395.08  Aligned_cols=148  Identities=36%  Similarity=0.712  Sum_probs=132.1

Q ss_pred             CCCCCCceecCCHHHHHH-HHHHhHcCCCCCcccEEeccCCCCCCCCCCCCCcccCCCceEEEeecccccccCCCccccC
Q 047949            1 MNSLVGFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRG   79 (388)
Q Consensus         1 m~LPpGFRF~PTDEELV~-YL~~Ki~G~plp~~~I~evDVY~~ePWdLP~~s~~~g~d~eWYFFspr~rKy~nG~R~nRa   79 (388)
                      +.|||||||||||||||. ||++|+.|.+++.++|+++|||++|||+||+.+..+  +.+|||||++++||++|.|++|+
T Consensus        13 ~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g--~~ewYFFs~r~~ky~~g~R~nR~   90 (174)
T 3ulx_A           13 LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG--AREWYFFTPRDRKYPNGSRPNRA   90 (174)
T ss_dssp             TTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSC--SSEEEEEEECCC-----CCSCEE
T ss_pred             cCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccC--CceEEEEeccccccCCCCCceee
Confidence            479999999999999999 999999999999999999999999999999988765  78999999999999999999999


Q ss_pred             CCCceEEecCCCceEEeCCCceEEEEEEEEEEEeecCCCCCCCcCeEEEEEEeCCCCC----------CCCCeEEEEEEE
Q 047949           80 TKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDPV----------YKKDFVVCRLER  149 (388)
Q Consensus        80 Tg~GyWKatGkdk~I~~~~~g~vIG~KKTLvFY~~Grap~G~KT~WvMhEYrL~~~~~----------~~~d~VLCRIfk  149 (388)
                      |++||||+||++++|...  +.+||+||||+||. |++|++.||+|+||||+|.....          ..++|||||||+
T Consensus        91 t~~G~WkatG~dk~I~~~--g~~vG~KktLvFy~-g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~  167 (174)
T 3ulx_A           91 AGNGYWKATGADKPVAPR--GRTLGIKKALVFYA-GKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYN  167 (174)
T ss_dssp             ETTEEEEECSCCEEECCS--SSCCEEEEEEEEEE-SSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEE
T ss_pred             cCCceEccCCCCcEEeeC--CcEEEEEEEEEEec-CCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEE
Confidence            999999999999999876  38999999999999 99999999999999999998643          157999999999


Q ss_pred             eCCC
Q 047949          150 KRDQ  153 (388)
Q Consensus       150 K~~~  153 (388)
                      |+..
T Consensus       168 K~~~  171 (174)
T 3ulx_A          168 KKNE  171 (174)
T ss_dssp             SCC-
T ss_pred             cCCC
Confidence            8753

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=3.1e-54  Score=390.71  Aligned_cols=148  Identities=39%  Similarity=0.714  Sum_probs=129.4

Q ss_pred             CCCCCCceecCCHHHHHH-HHHHhHcCCCCCcccEEeccCCCCCCCCCCCCCcccCCCceEEEeecccccccCCCccccC
Q 047949            1 MNSLVGFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRG   79 (388)
Q Consensus         1 m~LPpGFRF~PTDEELV~-YL~~Ki~G~plp~~~I~evDVY~~ePWdLP~~s~~~g~d~eWYFFspr~rKy~nG~R~nRa   79 (388)
                      +.|||||||||||||||. ||++|+.|.+++.++|+++|||++|||+||+.+..+  +.+|||||++++||++|.|++|+
T Consensus        15 ~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g--~~ewyFFs~r~~k~~~g~R~~R~   92 (171)
T 1ut7_A           15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEWYFFSPRDRKYPNGSRPNRV   92 (171)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC--SSEEEEEEECCC-------CCEE
T ss_pred             cCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcC--CccEEEEeccccccCCCCccccc
Confidence            479999999999999999 999999999999999999999999999999987655  78999999999999999999999


Q ss_pred             CCCceEEecCCCceEEeCCCceEEEEEEEEEEEeecCCCCCCCcCeEEEEEEeCCCCC-----CCCCeEEEEEEEeCCC
Q 047949           80 TKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDPV-----YKKDFVVCRLERKRDQ  153 (388)
Q Consensus        80 Tg~GyWKatGkdk~I~~~~~g~vIG~KKTLvFY~~Grap~G~KT~WvMhEYrL~~~~~-----~~~d~VLCRIfkK~~~  153 (388)
                      |++||||+||++++|...+  .+||+||+|+||. |++|++.||+|+||||+|.....     ..++|||||||+|+..
T Consensus        93 t~~G~Wk~tG~~k~I~~~~--~~vG~KktLvFy~-g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           93 AGSGYWKATGTDKIISTEG--QRVGIKKALVFYI-GKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             ETTEEEEEEEEEEEEEETT--EEEEEEEEEEEEE-SSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             CCCCEEeccCCCceEEecC--cEEEEEEEEEEEc-CcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            9999999999999999865  8999999999999 99999999999999999998752     2689999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	388
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	4e-37

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  130 bits (327), Expect = 4e-37
 Identities = 58/153 (37%), Positives = 77/153 (50%), Gaps = 11/153 (7%)

Query: 5   VGFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFF 63
            GFRFYPTDEE++   L  K     FS++ I EID Y F+PW LP  +    +E  WYFF
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFF 76

Query: 64  CEPDYKYAKSKRVNRGTKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKT 123
              D KY    R NR    G WK TG    I  +   + +G K+ L F     A K  KT
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGK-APKGTKT 133

Query: 124 EWVMHEIAVEDD-----PVYKKDFVVCRLERKR 151
            W+MHE  + +           D+V+CR+ +K+
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	388
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.5e-52  Score=369.60  Aligned_cols=146  Identities=40%  Similarity=0.723  Sum_probs=127.4

Q ss_pred             CCCCCCceecCCHHHHHH-HHHHhHcCCCCCcccEEeccCCCCCCCCCCCCCcccCCCceEEEeecccccccCCCccccC
Q 047949            1 MNSLVGFRFYPTDEEIIC-LLKMKRLDPGFSVRTIKEIDFYGFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSKRVNRG   79 (388)
Q Consensus         1 m~LPpGFRF~PTDEELV~-YL~~Ki~G~plp~~~I~evDVY~~ePWdLP~~s~~~g~d~eWYFFspr~rKy~nG~R~nRa   79 (388)
                      |+|||||||+|||||||. ||++|+.|.+++.++|+++|||++|||+||+....+  +.+||||+++.+++++|.|.+|+
T Consensus        15 l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~--~~~wyFft~~~~k~~~g~r~~R~   92 (166)
T d1ut7a_          15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEWYFFSPRDRKYPNGSRPNRV   92 (166)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC--SSEEEEEEECCC-------CCEE
T ss_pred             ccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccC--cceEEEEeeeccccCCCCccccc
Confidence            689999999999999999 999999999999999999999999999999876544  78999999999999999999999


Q ss_pred             CCCceEEecCCCceEEeCCCceEEEEEEEEEEEeecCCCCCCCcCeEEEEEEeCCCCCC-----CCCeEEEEEEEeC
Q 047949           80 TKEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSRHDSASKKAKTEWVMHEIAVEDDPVY-----KKDFVVCRLERKR  151 (388)
Q Consensus        80 Tg~GyWKatGkdk~I~~~~~g~vIG~KKTLvFY~~Grap~G~KT~WvMhEYrL~~~~~~-----~~d~VLCRIfkK~  151 (388)
                      |++|+||++|+++.|...+  .+||+||+|+||+ ++++++.||+|+||||+|......     .++|||||||+|+
T Consensus        93 ~g~G~Wk~~g~~~~i~~~g--~~vG~kk~l~fy~-~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          93 AGSGYWKATGTDKIISTEG--QRVGIKKALVFYI-GKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             ETTEEEEEEEEEEEEEETT--EEEEEEEEEEEEE-SSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             cCCCEecccCCCceEecCC--cEEEEEEEEEEEe-cCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            9999999999999998754  8999999999999 999999999999999999886543     5789999999984