Citrus Sinensis ID: 048002

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
TFFLVGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSSKVSHHRMLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSEGYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHPENSRHPRKDEL
cHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHcccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEccccccccccccccccccccEEEEEEcccccccccccEEEEEccccccccccccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHHHccccccccccccccccEEccccccccccccEEHHHHcccccccEccccEcHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcccccccEcccHHHHHHHHHHHccEcEcccccccccccccccccccccEEEEccccccccHcccccEcccEEEEccccEHHHHHHHHccccEEEEEccccHHHHcccccEEccEcEccEEEEEccEcccccEccEEEEEccccccccHHHcccccEEEEccccccccccccccc
TFFLVGLSLVLVFGVAesfdyqesdlaSEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVnqmdkpykLRLNRFadmtnhefmssrsskvshhrmlhgprrqtgfmhgktqdlppsvdwrkqgavtgvkdqgrcgscwaFSTVVSVEGinkiktgelwslseqelvdcdkdnhgcdgglMEQALNFIAksegltteksypytakdgscelptSMVSIIYRVHICswngdknapevildgyemvpesDENALMKAVANQPVAVaidaggkdfqfysegygatqdgtKYWIVKnswgtdweekGYIRMLRgidaeeglcgitleasypvklhpensrhprkdel
TFFLVGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHtvsrdlkekqirFNVFKqnlkrihkvnqmdkpykLRLNRFADMTNHEFmssrsskvshhRMLHGprrqtgfmhgktqdlppsvDWRKQGAVtgvkdqgrcgsCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSEgygatqdgtkyWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLeasypvklhpensrhprkdel
TfflvglslvlvfgvAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSSKVSHHRMLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSEGYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHPENSRHPRKDEL
*FFLVGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFA*******************************************WRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSEGYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPV***************
TFFLVGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSS********************KTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSEGYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK**************
TFFLVGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEF**************HGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSEGYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHP***********
TFFLVGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSSK************QTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSEGYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKL*************
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oooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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TFFLVGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSSKVSHHRMLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSEGYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHPENSRHPRKDEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query351 2.2.26 [Sep-21-2011]
P25803362 Vignain OS=Phaseolus vulg N/A no 0.940 0.911 0.592 1e-117
P12412362 Vignain OS=Vigna mungo PE N/A no 0.908 0.881 0.588 1e-116
O65039360 Vignain OS=Ricinus commun N/A no 0.911 0.888 0.603 1e-115
Q9FGR9361 KDEL-tailed cysteine endo yes no 0.948 0.922 0.541 1e-109
P43156360 Thiol protease SEN102 OS= N/A no 0.945 0.922 0.541 1e-108
Q9STL5364 KDEL-tailed cysteine endo no no 0.951 0.917 0.514 1e-103
Q9STL4361 KDEL-tailed cysteine endo no no 0.943 0.916 0.517 1e-102
P25250373 Cysteine proteinase EP-B N/A no 0.880 0.828 0.5 3e-88
P25249371 Cysteine proteinase EP-B N/A no 0.874 0.827 0.502 2e-87
P25251328 Cysteine proteinase COT44 N/A no 0.826 0.884 0.460 4e-73
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function desciption
 Score =  423 bits (1087), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/371 (59%), Positives = 258/371 (69%), Gaps = 41/371 (11%)

Query: 5   VGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLK 64
           V LS  LV GVA SFD+ + DLASEE LWDLYERWRSHHTVSR L EK  RFNVFK NL 
Sbjct: 9   VVLSFSLVLGVANSFDFHDKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANLM 68

Query: 65  RIHKVNQMDKPYKLRLNRFADMTNHEFMSSRS-SKVSHHRMLHG-PRRQTGFMHGKTQDL 122
            +H  N+MDKPYKL+LN+FADMTNHEF S+ + SKV+H RM  G P     FM+ K   +
Sbjct: 69  HVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSV 128

Query: 123 PPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK-DN 181
           PPSVDWRK+GAVT VKDQG+CGSCWAFSTVV+VEGIN+IKT +L +LSEQELVDCDK +N
Sbjct: 129 PPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEEN 188

Query: 182 HGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNA 241
            GC+GGLME A  FI +  G+TTE +YPY A++G+C+   S V               N 
Sbjct: 189 QGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCD--ASKV---------------ND 231

Query: 242 PEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSE---------------- 285
             V +DG+E VP +DE+AL+KAVANQPV+VAIDAGG DFQFYSE                
Sbjct: 232 LAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTDLNHGVA 291

Query: 286 --GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKL---HP 340
             GYG T DGT YWIV+NSWG +W E GYIRM R I  +EGLCGI +  SYP+K    +P
Sbjct: 292 IVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPIKNSSDNP 351

Query: 341 ENSRHPRKDEL 351
             S    KDEL
Sbjct: 352 TGSFSSPKDEL 362
Thought to be involved in the hydrolysis of stored seed proteins.
Phaseolus vulgaris (taxid: 3885)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function description
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1 Back     alignment and function description
>sp|Q9STL5|CEP3_ARATH KDEL-tailed cysteine endopeptidase CEP3 OS=Arabidopsis thaliana GN=CEP3 PE=2 SV=1 Back     alignment and function description
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function description
>sp|P25250|CYSP2_HORVU Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1 Back     alignment and function description
>sp|P25249|CYSP1_HORVU Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1 Back     alignment and function description
>sp|P25251|CYSP4_BRANA Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
224102377358 predicted protein [Populus trichocarpa] 0.945 0.927 0.674 1e-137
255547982359 cysteine protease, putative [Ricinus com 0.903 0.883 0.670 1e-133
296081395359 unnamed protein product [Vitis vinifera] 0.945 0.924 0.656 1e-132
359473128357 PREDICTED: vignain-like [Vitis vinifera] 0.945 0.929 0.656 1e-132
351629615359 KDDL-tailed cysteine proteinase CP4 [Cof 0.945 0.924 0.643 1e-132
224133760362 predicted protein [Populus trichocarpa] 0.948 0.919 0.604 1e-124
358348957362 Cysteine proteinase [Medicago truncatula 0.948 0.919 0.577 1e-119
351721126362 cysteine proteinase precursor [Glycine m 0.948 0.919 0.593 1e-118
217073894362 unknown [Medicago truncatula] gi|3885074 0.948 0.919 0.574 1e-117
388517427362 unknown [Medicago truncatula] 0.948 0.919 0.572 1e-117
>gi|224102377|ref|XP_002312656.1| predicted protein [Populus trichocarpa] gi|222852476|gb|EEE90023.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/369 (67%), Positives = 277/369 (75%), Gaps = 37/369 (10%)

Query: 3   FLVGLSLVLVFGVAESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQN 62
            L   S+VLVF +A+SFDY E DLASEE L DLYERWRSHHTVSR L EKQ RFNVFK+N
Sbjct: 7   ILAVFSVVLVFRLADSFDYTEEDLASEERLRDLYERWRSHHTVSRSLAEKQERFNVFKEN 66

Query: 63  LKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRS-SKVSHHRMLHGPRRQTGFMHGKTQD 121
           LK IHKVN  D+PYKL+LN FADMTNHEF+     SKVSH+R+L G R+ TG MH  T  
Sbjct: 67  LKHIHKVNHKDRPYKLKLNSFADMTNHEFLQHYGGSKVSHYRVLRGQRQGTGSMHEDTSK 126

Query: 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDN 181
           LP SVDWRK GAVTG+KDQG+CGSCWAFSTV +VEGINKIKTGEL SLSEQELVDCD DN
Sbjct: 127 LPSSVDWRKNGAVTGIKDQGKCGSCWAFSTVAAVEGINKIKTGELISLSEQELVDCDSDN 186

Query: 182 HGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNA 241
           HGC+GGLME A NFI +  GLT+E +YPY AK+  C+                 +   N+
Sbjct: 187 HGCNGGLMEDAFNFIKQIGGLTSENTYPYRAKEEPCD-----------------SNKMNS 229

Query: 242 PEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSE---------------- 285
           P V +DGYEMVPE+DENALMKAVANQPVA+A+DAGGKD QFYSE                
Sbjct: 230 PVVNIDGYEMVPENDENALMKAVANQPVAIAMDAGGKDLQFYSEAIFTGDCGTELNHGVA 289

Query: 286 --GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHPENS 343
             GYG TQDGTKYWIVKNSWGTDW EKGYIRM RGIDAEEGLCGIT+EASYPVKL  +N 
Sbjct: 290 LVGYGTTQDGTKYWIVKNSWGTDWGEKGYIRMQRGIDAEEGLCGITMEASYPVKLRSDNK 349

Query: 344 RHP-RKDEL 351
           + P RKDEL
Sbjct: 350 KAPSRKDEL 358

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255547982|ref|XP_002515048.1| cysteine protease, putative [Ricinus communis] gi|223546099|gb|EEF47602.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296081395|emb|CBI16828.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359473128|ref|XP_002285397.2| PREDICTED: vignain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|351629615|gb|AEQ54771.1| KDDL-tailed cysteine proteinase CP4 [Coffea canephora] Back     alignment and taxonomy information
>gi|224133760|ref|XP_002321654.1| predicted protein [Populus trichocarpa] gi|222868650|gb|EEF05781.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|358348957|ref|XP_003638507.1| Cysteine proteinase [Medicago truncatula] gi|355504442|gb|AES85645.1| Cysteine proteinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|351721126|ref|NP_001237199.1| cysteine proteinase precursor [Glycine max] gi|31559530|dbj|BAC77523.1| cysteine proteinase [Glycine max] gi|31559532|dbj|BAC77524.1| cysteine proteinase [Glycine max] Back     alignment and taxonomy information
>gi|217073894|gb|ACJ85307.1| unknown [Medicago truncatula] gi|388507498|gb|AFK41815.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388517427|gb|AFK46775.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.905 0.880 0.555 2.5e-97
TAIR|locus:505006391364 CEP3 "cysteine endopeptidase 3 0.894 0.862 0.529 8.1e-92
TAIR|locus:2167821463 RD21B "esponsive to dehydratio 0.826 0.626 0.470 1.2e-67
TAIR|locus:2825832462 RD21A "responsive to dehydrati 0.846 0.642 0.447 3.1e-67
TAIR|locus:2030427356 XCP2 "xylem cysteine peptidase 0.851 0.839 0.439 5.8e-66
TAIR|locus:2090614452 AT3G19390 [Arabidopsis thalian 0.829 0.643 0.441 2e-65
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.849 0.839 0.442 3.2e-65
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.817 0.824 0.412 2.3e-62
TAIR|locus:2090629362 AT3G19400 [Arabidopsis thalian 0.811 0.787 0.430 6.2e-62
TAIR|locus:2038515343 AT1G06260 [Arabidopsis thalian 0.800 0.819 0.440 4.3e-61
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
 Identities = 200/360 (55%), Positives = 243/360 (67%)

Query:    17 ESFDYQESDLASEECLWDLYERWRSHHTVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPY 76
             +  D+   D+ SE  LW+LYERWRSHHTV+R L+EK  RFNVFK N+K IH+ N+ DK Y
Sbjct:    19 KGLDFHNKDVESENSLWELYERWRSHHTVARSLEEKAKRFNVFKHNVKHIHETNKKDKSY 78

Query:    77 KLRLNRFADMTNHEFMSSRS-SKVSHHRMLHGPRRQT-GFMHGKTQDLPPSVDWRKQGAV 134
             KL+LN+F DMT+ EF  + + S + HHRM  G ++ T  FM+     LP SVDWRK GAV
Sbjct:    79 KLKLNKFGDMTSEEFRRTYAGSNIKHHRMFQGEKKATKSFMYANVNTLPTSVDWRKNGAV 138

Query:   135 TGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKD-NHGCDGGLMEQAL 193
             T VK+QG+CGSCWAFSTVV+VEGIN+I+T +L SLSEQELVDCD + N GC+GGLM+ A 
Sbjct:   139 TPVKNQGQCGSCWAFSTVVAVEGINQIRTKKLTSLSEQELVDCDTNQNQGCNGGLMDLAF 198

Query:   194 NFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVP 253
              FI +  GLT+E  YPY A D +C+                    +NAP V +DG+E VP
Sbjct:   199 EFIKEKGGLTSELVYPYKASDETCD-----------------TNKENAPVVSIDGHEDVP 241

Query:   254 ESDENALMKAVANQPVAVAIDAGGKDFQFYSEG------------------YGATQDGTK 295
             ++ E+ LMKAVANQPV+VAIDAGG DFQFYSEG                  YG T DGTK
Sbjct:   242 KNSEDDLMKAVANQPVSVAIDAGGSDFQFYSEGVFTGRCGTELNHGVAVVGYGTTIDGTK 301

Query:   296 YWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK---LHPEN-SRHPRKDEL 351
             YWIVKNSWG +W EKGYIRM RGI  +EGLCGI +EASYP+K    +P   S    KDEL
Sbjct:   302 YWIVKNSWGEEWGEKGYIRMQRGIRHKEGLCGIAMEASYPLKNSNTNPSRLSLDSLKDEL 361
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
TAIR|locus:505006391 CEP3 "cysteine endopeptidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825832 RD21A "responsive to dehydration 21A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030427 XCP2 "xylem cysteine peptidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090629 AT3G19400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038515 AT1G06260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FGR9CEP1_ARATH3, ., 4, ., 2, 2, ., -0.54130.94870.9224yesno
O65039CYSEP_RICCO3, ., 4, ., 2, 2, ., -0.60380.91160.8888N/Ano
P25249CYSP1_HORVU3, ., 4, ., 2, 2, ., -0.50280.87460.8274N/Ano
Q3ZKN1CATK_CANFA3, ., 4, ., 2, 2, ., 3, 80.35830.84330.8969yesno
O60911CATL2_HUMAN3, ., 4, ., 2, 2, ., 4, 30.35650.82620.8682yesno
P43156CYSP_HEMSP3, ., 4, ., 2, 2, ., -0.54150.94580.9222N/Ano
P25803CYSEP_PHAVU3, ., 4, ., 2, 2, ., -0.59290.94010.9116N/Ano
P12412CYSEP_VIGMU3, ., 4, ., 2, 2, ., -0.58880.90880.8812N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00081713
hypothetical protein (358 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-105
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 4e-91
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 1e-54
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 5e-50
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 3e-49
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 4e-43
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 2e-33
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 4e-33
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 1e-28
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 3e-26
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 1e-19
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-14
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 2e-14
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 8e-14
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 9e-12
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 2e-05
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 1e-04
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 3e-04
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  307 bits (788), Expect = e-105
 Identities = 115/235 (48%), Positives = 141/235 (60%), Gaps = 42/235 (17%)

Query: 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDN 181
           LP S DWR++GAVT VKDQG+CGSCWAFS V ++EG   IKTG+L SLSEQ+LVDCD  N
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTGN 60

Query: 182 HGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNA 241
           +GC+GGL + A  +I K+ G+ TE  YPYTA DG+C+                     N+
Sbjct: 61  NGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKK-----------------SNS 103

Query: 242 PEVILDGYEMVPESDENALMKAVA-NQPVAVAIDAGGKDFQFYSE--------------- 285
               + GY  VP +DE AL  A+A N PV+VAIDA   DFQ Y                 
Sbjct: 104 KYAKIKGYGDVPYNDEEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHA 163

Query: 286 ----GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPV 336
               GYG T++G  YWIVKNSWGTDW E GY R+ RG++     CGI  EASYP+
Sbjct: 164 VLIVGYG-TENGVPYWIVKNSWGTDWGENGYFRIARGVNE----CGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 351
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.91
cd00585 437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.81
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.66
PF03051 438 Peptidase_C1_2: Peptidase C1-like family This fami 99.57
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.49
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 98.82
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.67
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 96.63
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=5.9e-78  Score=548.20  Aligned_cols=280  Identities=39%  Similarity=0.700  Sum_probs=246.0

Q ss_pred             HHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccCC-CCeEEEcccCCCCChhhhhhhcCCcccc-CccCC
Q 048002           30 ECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQMD-KPYKLRLNRFADMTNHEFMSSRSSKVSH-HRMLH  106 (351)
Q Consensus        30 ~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~-~s~~~g~N~FsD~t~eEf~~~~~~~~~~-~~~~~  106 (351)
                      ..+.+.|..|+.+| |+|.+.+|..+|+.+|++|+..++++++.+ .|.+.|+|+|||||+|||++++++.+.. .+...
T Consensus        65 l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~  144 (372)
T KOG1542|consen   65 LGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPG  144 (372)
T ss_pred             cchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccCcc
Confidence            34478999999999 999999999999999999999999998886 4999999999999999999999876541 11111


Q ss_pred             CCCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCC
Q 048002          107 GPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDG  186 (351)
Q Consensus       107 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~G  186 (351)
                      ....   ........||++||||++|.||||||||+||||||||+++++|++++|++|++++||||+|+||+..++||+|
T Consensus       145 ~~~~---~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~d~gC~G  221 (372)
T KOG1542|consen  145 DAAE---APIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSCDNGCNG  221 (372)
T ss_pred             cccc---CcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCcCCcCCC
Confidence            1111   1113346899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHcCCCCCCCCCccccCCC-CCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHH-
Q 048002          187 GLMEQALNFIAKSEGLTTEKSYPYTAKDG-SCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAV-  264 (351)
Q Consensus       187 G~~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l-  264 (351)
                      |.+..|++|+.+.+|+..|.+|||++..+ .|...+                  ....+.|+++..++. ||++|.+.| 
T Consensus       222 Gl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~~------------------~~~~v~I~~f~~l~~-nE~~ia~wLv  282 (372)
T KOG1542|consen  222 GLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFDK------------------SKIVVSIKDFSMLSN-NEDQIAAWLV  282 (372)
T ss_pred             CChhHHHHHHHHhCCccccccCCccccCCCccccch------------------hhceEEEeccEecCC-CHHHHHHHHH
Confidence            99999999988878999999999999887 899876                  567889999999976 888888887 


Q ss_pred             hcCCEEEEEecCCCCccCCCC----------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCC
Q 048002          265 ANQPVAVAIDAGGKDFQFYSE----------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAE  322 (351)
Q Consensus       265 ~~gPV~v~~~~~~~~f~~Y~~----------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~  322 (351)
                      ++|||+|+|++.  .+++|++                      |||.+.-.++|||||||||++|||+||+||.||.   
T Consensus       283 ~~GPi~vgiNa~--~mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~---  357 (372)
T KOG1542|consen  283 TFGPLSVGINAK--PMQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGS---  357 (372)
T ss_pred             hcCCeEEEEchH--HHHHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccc---
Confidence            789999999975  7999988                      9999722899999999999999999999999995   


Q ss_pred             CCCcccccccceeee
Q 048002          323 EGLCGITLEASYPVK  337 (351)
Q Consensus       323 ~~~Cgi~~~~~yp~~  337 (351)
                       |.|||+++++-+.+
T Consensus       358 -N~CGi~~mvss~~v  371 (372)
T KOG1542|consen  358 -NACGIADMVSSAAV  371 (372)
T ss_pred             -cccccccchhhhhc
Confidence             56999999876654

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 2e-77
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 2e-68
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 7e-60
1pci_A322 Procaricain Length = 322 4e-59
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 1e-57
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 2e-54
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 2e-54
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 3e-53
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 3e-53
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 4e-53
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 1e-52
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 5e-51
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 2e-50
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 4e-50
2act_A220 Crystallographic Refinement Of The Structure Of Act 8e-49
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 9e-48
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 3e-46
1ppo_A216 Determination Of The Structure Of Papaya Protease O 4e-46
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 5e-46
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 3e-45
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 1e-44
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 1e-44
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 2e-44
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 4e-44
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 1e-43
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 2e-43
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 3e-43
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 3e-43
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 3e-43
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 3e-43
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 4e-43
3hwn_A258 Cathepsin L With Az13010160 Length = 258 1e-42
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 1e-42
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 2e-42
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 3e-42
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 4e-42
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 4e-42
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 6e-42
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 2e-41
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 4e-41
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 4e-41
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 8e-41
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 9e-40
3of8_A221 Structural Basis For Reversible And Irreversible In 7e-39
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 8e-39
3h89_A220 A Combined Crystallographic And Molecular Dynamics 9e-39
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 4e-38
2vhs_A217 Cathsilicatein, A Chimera Length = 217 5e-38
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 5e-38
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 7e-38
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 7e-38
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 7e-38
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 7e-38
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 8e-38
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 8e-38
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 1e-37
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 1e-37
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 1e-37
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 2e-37
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 2e-37
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 4e-37
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 9e-37
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 1e-36
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 1e-36
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 1e-36
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 2e-35
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 3e-32
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 2e-30
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 1e-29
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 1e-29
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 2e-29
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 2e-29
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 3e-29
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 1e-26
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 6e-26
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 2e-25
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 3e-24
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 9e-23
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 3e-21
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 3e-21
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 2e-20
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 6e-20
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 5e-19
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 7e-18
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 6e-15
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 4e-13
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 4e-13
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 4e-13
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 2e-12
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 6e-12
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 4e-11
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 1e-10
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 2e-10
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 3e-10
1mir_A322 Rat Procathepsin B Length = 322 4e-10
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 2e-09
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 9e-09
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 1e-08
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 1e-08
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 8e-07
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 9e-06
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 2e-05
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 3e-05
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 3e-05
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 1e-04
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 4e-04
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 5e-04
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 5e-04
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/240 (60%), Positives = 170/240 (70%), Gaps = 36/240 (15%)
Query: 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKD- 180
           +P SVDWRK+GAVT VKDQG+CGSCWAFST+V+VEGIN+IKT +L SLSEQELVDCD D 
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQ 61
Query: 181 NHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKN 240
           N GC+GGLM+ A  FI +  G+TTE +YPY A DG+C++                   +N
Sbjct: 62  NQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSK-----------------EN 104
Query: 241 APEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSE--------------- 285
           AP V +DG+E VPE+DENAL+KAVANQPV+VAIDAGG DFQFYSE               
Sbjct: 105 APAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGV 164
Query: 286 ---GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHPEN 342
              GYG T DGTKYW VKNSWG +W EKGYIRM RGI  +EGLCGI +EASYP+K    N
Sbjct: 165 AIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNN 224
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-157
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-147
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-143
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-143
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-142
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-138
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-136
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-135
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-127
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-127
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-126
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-125
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-124
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-124
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-124
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-124
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-123
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-123
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-121
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-119
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-116
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-115
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-114
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-114
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-113
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-113
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-113
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-111
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-111
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-110
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-100
3u8e_A222 Papain-like cysteine protease; papain-like cystein 2e-97
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 3e-95
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 3e-92
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 4e-88
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 4e-81
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 6e-79
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 2e-71
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 4e-66
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 1e-22
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 4e-14
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 6e-12
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  442 bits (1138), Expect = e-157
 Identities = 130/337 (38%), Positives = 175/337 (51%), Gaps = 40/337 (11%)

Query: 20  DYQESDLASEECLWDLYERWRSHHTVS-RDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKL 78
            Y + DL S E L  L+  W  +H     ++ EK  RF +FK NL  I + N+ +  Y L
Sbjct: 6   GYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWL 65

Query: 79  RLNRFADMTNHEFMSSRSSKVSHHRMLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVK 138
            LN FAD++N EF       +    +         F++    +LP +VDWRK+GAVT V+
Sbjct: 66  GLNEFADLSNDEFNEKYVGSLIDATIEQ--SYDEEFINEDIVNLPENVDWRKKGAVTPVR 123

Query: 139 DQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAK 198
            QG CGSCWAFS V +VEGINKI+TG+L  LSEQELVDC++ +HGC GG    AL ++AK
Sbjct: 124 HQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAK 183

Query: 199 SEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDEN 258
           + G+     YPY AK G+C                        P V   G   V  ++E 
Sbjct: 184 N-GIHLRSKYPYKAKQGTCRA-----------------KQVGGPIVKTSGVGRVQPNNEG 225

Query: 259 ALMKAVANQPVAVAIDAGGKDFQFYSEG------------------YGATQDGTKYWIVK 300
            L+ A+A QPV+V +++ G+ FQ Y  G                  YG    G  Y ++K
Sbjct: 226 NLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYG-KSGGKGYILIK 284

Query: 301 NSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK 337
           NSWGT W EKGYIR+ R      G+CG+   + YP K
Sbjct: 285 NSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query351
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2e01_A 457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
2cb5_A 453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 99.97
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.76
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.66
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=9.3e-81  Score=593.59  Aligned_cols=295  Identities=42%  Similarity=0.777  Sum_probs=255.0

Q ss_pred             ccCCccccCCHHHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccCCCCeEEEcccCCCCChhhhhhhcCC
Q 048002           19 FDYQESDLASEECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSS   97 (351)
Q Consensus        19 ~~~~~~~~~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~s~~~g~N~FsD~t~eEf~~~~~~   97 (351)
                      +.+++.++++++.+.++|++||++| |.|.+.+|+.+|+.||++|+++|++||+++.+|++|+|+|+|||.+||++++++
T Consensus        49 ~~y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~~~~~~  128 (363)
T 3tnx_A           49 VGYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTG  128 (363)
T ss_dssp             -----CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHHHHHSC
T ss_pred             cCCChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHHHHhcc
Confidence            4677888999999999999999999 999999999999999999999999999999999999999999999999999887


Q ss_pred             ccccCccCCCCCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhc
Q 048002           98 KVSHHRMLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDC  177 (351)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc  177 (351)
                      .............. ........+||++||||++|+|+||||||.||||||||++++||++++|++++++.||+|+|+||
T Consensus       129 ~~~~~~~~~~~~~~-~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC  207 (363)
T 3tnx_A          129 SIAGNYTTTELSYE-EVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDC  207 (363)
T ss_dssp             SSCSCCCCSSSSSS-CCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHH
T ss_pred             cccccccccccccc-cccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcc
Confidence            65421111110000 11112235799999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChH
Q 048002          178 DKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDE  257 (351)
Q Consensus       178 ~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~  257 (351)
                      +..+.||+||++..|+.|+.++ ||++|.+|||.+.++.|....                 ......++.++..++..++
T Consensus       208 ~~~~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~-----------------~~~~~~~~~~~~~~~~~~e  269 (363)
T 3tnx_A          208 DRRSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSRE-----------------KGPYAAKTDGVRQVQPYNE  269 (363)
T ss_dssp             CTTSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGG-----------------GCSCSBCCCEEEEECSSCH
T ss_pred             cCCCCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCC-----------------CCCceeeccceEEcchhhH
Confidence            9988999999999999999987 999999999999888776543                 1234556778888888899


Q ss_pred             HHHHHHHhcCCEEEEEecCCCCccCCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecC
Q 048002          258 NALMKAVANQPVAVAIDAGGKDFQFYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGI  319 (351)
Q Consensus       258 ~~i~~~l~~gPV~v~~~~~~~~f~~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~  319 (351)
                      .+++.+|++|||+|+|++...+|++|++                  |||+     +|||||||||++|||+|||||+||.
T Consensus       270 ~~l~~~v~~gPvsvai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~  344 (363)
T 3tnx_A          270 GALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGT  344 (363)
T ss_dssp             HHHHHHHTTSCEEEEECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCS
T ss_pred             HHHHHHHHcCCcEEEEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCC
Confidence            9999999999999999987678999987                  8876     3999999999999999999999999


Q ss_pred             CCCCCCcccccccceeee
Q 048002          320 DAEEGLCGITLEASYPVK  337 (351)
Q Consensus       320 ~~~~~~Cgi~~~~~yp~~  337 (351)
                      ++..|+|||+++++||+.
T Consensus       345 ~~~~~~CGI~~~a~yPik  362 (363)
T 3tnx_A          345 GNSYGVCGLYTSSFYPVK  362 (363)
T ss_dssp             CCSSCGGGTTSCEEEEEC
T ss_pred             CCCCCcCCccceeeeccc
Confidence            887799999999999985
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 351
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 9e-63
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 3e-60
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 3e-60
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 5e-60
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 8e-59
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 9e-55
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 1e-54
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 1e-54
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 2e-54
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 1e-53
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 6e-53
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 7e-52
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 1e-51
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 2e-51
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 2e-51
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 9e-51
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 2e-46
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-45
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 3e-42
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 1e-41
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 3e-05
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 5e-04
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Vignain (bean endopeptidase)
species: Castor bean (Ricinus communis) [TaxId: 3988]

 Score =  197 bits (502), Expect = 9e-63
 Identities = 142/240 (59%), Positives = 165/240 (68%), Gaps = 36/240 (15%)

Query: 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDN 181
           +P SVDWRK+GAVT VKDQG+CGSCWAFST+V+VEGIN+IKT +L SLSEQELVDCD D 
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQ 61

Query: 182 HG-CDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKN 240
           +  C+GGLM+ A  FI +  G+TTE +YPY A DG                       +N
Sbjct: 62  NQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDG-----------------TCDVSKEN 104

Query: 241 APEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQFYSE--------------- 285
           AP V +DG+E VPE+DENAL+KAVANQPV+VAIDAGG DFQFYSE               
Sbjct: 105 APAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGV 164

Query: 286 ---GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHPEN 342
              GYG T DGTKYW VKNSWG +W EKGYIRM RGI  +EGLCGI +EASYP+K    N
Sbjct: 165 AIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNN 224
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query351
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.65
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.55
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-71  Score=524.01  Aligned_cols=281  Identities=42%  Similarity=0.755  Sum_probs=235.4

Q ss_pred             HHHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccC----CCCeEEEcccCCCCChhhhhhhcCCccccCc
Q 048002           29 EECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQM----DKPYKLRLNRFADMTNHEFMSSRSSKVSHHR  103 (351)
Q Consensus        29 ~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~----~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~  103 (351)
                      ++.+...|++||++| |.|.+ +|+.+|+.||++|+++|++||++    +.+|++|+|+|+|||.+||++++++......
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            356678899999999 99966 57789999999999999999985    3799999999999999999998876544211


Q ss_pred             cCCCCCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC--CC
Q 048002          104 MLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK--DN  181 (351)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~~  181 (351)
                      .  .. .  ........+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+.  .+
T Consensus        84 ~--~~-~--~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~  158 (316)
T d1cs8a_          84 R--KG-K--VFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN  158 (316)
T ss_dssp             S--CC-E--ECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTC
T ss_pred             c--cC-c--cccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccC
Confidence            0  00 0  1122334589999999999999999999999999999999999999999999999999999999986  57


Q ss_pred             CCCCCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHH
Q 048002          182 HGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALM  261 (351)
Q Consensus       182 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~  261 (351)
                      .+|.||.+..|+.|+..++++..|.+|||......|....                  ......+..+.... .+++.|+
T Consensus       159 ~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~-~~~~~l~  219 (316)
T d1cs8a_         159 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP------------------KYSVANDAGFVDIP-KQEKALM  219 (316)
T ss_dssp             CGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG------------------GGEEECCCCEEECC-SCHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCccccccccccccccccccccc------------------cccccccccccccc-CcHHHHH
Confidence            8899999999999999986688999999998877776544                  22334455555554 4677777


Q ss_pred             HHH-hcCCEEEEEecCCCCccCCCC--------------------ccccC---CCCccEEEEEcCCCCCccCCceEEEEe
Q 048002          262 KAV-ANQPVAVAIDAGGKDFQFYSE--------------------GYGAT---QDGTKYWIVKNSWGTDWEEKGYIRMLR  317 (351)
Q Consensus       262 ~~l-~~gPV~v~~~~~~~~f~~Y~~--------------------Gyg~~---~~g~~yWivkNSWG~~WGe~Gy~~i~r  317 (351)
                      ++| ..|||+|++++...+|.+|++                    |||.+   .+|.+|||||||||++|||+|||||+|
T Consensus       220 ~~l~~~gpv~v~i~~~~~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r  299 (316)
T d1cs8a_         220 KAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAK  299 (316)
T ss_dssp             HHHHHHCCEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEEC
T ss_pred             HHHHHhCCeEEEEEeccchhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEee
Confidence            777 679999999997677998877                    99854   368999999999999999999999999


Q ss_pred             cCCCCCCCcccccccceeee
Q 048002          318 GIDAEEGLCGITLEASYPVK  337 (351)
Q Consensus       318 ~~~~~~~~Cgi~~~~~yp~~  337 (351)
                      +..   |+|||++.++||++
T Consensus       300 ~~~---n~CGI~~~~~yP~v  316 (316)
T d1cs8a_         300 DRR---NHCGIASAASYPTV  316 (316)
T ss_dssp             SSS---SGGGTTTSCEEECC
T ss_pred             CCC---CcCccCCeeeeeeC
Confidence            853   57999999999986
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure