Citrus Sinensis ID: 048096


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530
MARARNIKNSFITQTPSPLFQLFSISPFTSLFLSPKKSPRSHQRLFTSQNFAIFFLSLLLTFTFLGVSVLNFIQSYQDPPPCSLISPSSQNPLSSNSAMLFASLASSNTYNEDDHEPAGLANSVLVPLPAQLVAGNLSKEEREFWQQPGSEGYKPCLDFSLAYRRKSAKISKEKRKFLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMLPFFEDSSISDEEFGSIIRKIH
ccccccccccEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccHHHccccccccccccccccccccccccccccHHHHccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHcEEEcccccccccccccccccccccHHHHHHHccccEEEEccccHHHHcccccccccccccccHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHccccccccccccccccccccccccccccccEEEEccccEEEEccccccccHHHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHc
ccccccccccEEEccccccEEcEcccccHEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHEEEcccccccccccccccHHHHccHHHHHHHHHHHcEEHHcccHHHccccccccccccccccHHHHHHHHHHHHHHccEEEEcccHHHHHHcccHHHHHHEHHHHHHHHHccHHHHHHHHHHHHHHHHcccEEEEEEEEcccEEEEccccccccHHHHHHHHHHHHHcccccEEcccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHccccccccccccHHHHHHccccHHHHHHHHHHEEccccEEEEcccccHHHHHHHHHHHccccccccccHHHHHHHHHcccccHHHHHHHHHHHc
mararniknsfitqtpsplfqlfsispftslflspkksprshqrlftsQNFAIFFLSLLLTFTFLGVSVLNFIqsyqdpppcslispssqnplssnsAMLFASLAssntyneddhepaglansvlvplpaqlvagnLSKEEREfwqqpgsegykpcldFSLAYRRKSAKISKEKRKFLVVVAsgglnqqrnQIVDAVVIARILEAALVVPVLQvnliwgdesefsdifnvkHFKRTLQADVRVVSslpsthlmsrqsienqlpynispfWIRARFFKQLNEEGVLVLKGLDtklsknlppdlqKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIREsqpeyltgklNMSHIQRRLAGLCPLTASEIARFLKAlgapssariyiaggepfgghqalqplaaefpNLVTKEMLAqegelspyvnrsssLAAIDYIVSLnsnvfvpshggnmgramqghrayvghrkyikpnkkamlpffedssisdeeFGSIIRKIH
mararniknsfitqtpsplfQLFSISPFTSLFLSPKKSPRSHQRLFTSQNFAIFFLSLLLTFTFLGVSVLNFIQSYQDPPPCSLISPSSQNPLSSNSAMLFASLASSNTYNEDDHEPAGLANSVLVPLPAQLVAGNLSKEEREFwqqpgsegykpcLDFSLAYRRKSAKISKEKRKFLVVvasgglnqqrnQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMlpffedssisdeefgsiirkih
MARARNIKNSFITQTPSPLFQLFSISPFTSLFLSPKKSPRSHQRLFTSQNFAIfflsllltftflgvsvlNFIQSYQDPPPCslispssqnplssnsAMLFASLASSNTYNEDDHEPAGLANSVLVPLPAQLVAGNLSKEEREFWQQPGSEGYKPCLDFSLAYRRKSAKISKEKRKFLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMLPFFEDSSISDEEFGSIIRKIH
***********I***PSPLFQLFSISPFTSLFL**********RLFTSQNFAIFFLSLLLTFTFLGVSVLNFIQSYQ*********************************************SVLVPLPAQLVAGNL******FWQ****EGYKPCLDFSLAYRRKSAKISKEKRKFLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMLPFF******************
*************QTPSPLFQLFS***********************SQNFAIFFLSLLLTFTFLGVSVLNFIQSYQDPP********************************************************************GSEGYKPCLDF***************RKFLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHL********QLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNM*H**RRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMLPFFEDSSISDEEFGSIIRKI*
MARARNIKNSFITQTPSPLFQLFSISPFTSLFL*********QRLFTSQNFAIFFLSLLLTFTFLGVSVLNFIQSYQDPPPCSLISPSSQNPLSSNSAMLFASLASSNTYNEDDHEPAGLANSVLVPLPAQLVAGNLSKEEREFWQQPGSEGYKPCLDFSLAYRRKSAKISKEKRKFLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMLPFFEDSSISDEEFGSIIRKIH
******IKNSFITQTPSPLFQLFSISPFTSLFLSPKKSPRSHQRLFTSQNFAIFFLSLLLTFTFLGVSVLNFIQSYQDPPPCSLI***********************************************************WQQPGSEGYKPCLDFSLAYRRKSAKISKEKRKFLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMLPFFEDSSISDEEFGSIIR***
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MARARNIKNSFITQTPSPLFQLFSISPFTSLFLSPKKSPRSHQRLFTSQNFAIFFLSLLLTFTFLGVSVLNFIQSYQDPPPCSLISPSSQNPLSSNSAMLFASLASSNTYNEDDHEPAGLANSVLVPLPAQLVAGNLSKEEREFWQQPGSEGYKPCLDFSLAYRRKSAKISKEKRKFLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMLPFFEDSSISDEEFGSIIRKIH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query530 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.681 0.695 0.342 4e-57
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  223 bits (567), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 203/377 (53%), Gaps = 16/377 (4%)

Query: 143 EFWQQPGSEGYKPCLDFSLAYRRKSAKISKEKRKFLVVVASGGLNQQRNQIVDAVVIARI 202
           E W+   S G++P    S A R      +KE   +L V  +GGLNQQR+ I +AV+ ARI
Sbjct: 61  ELWESAKSGGWRP----SSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARI 116

Query: 203 LEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADVRVVSSLPSTHLMSR----QSI 258
           + A LV+P L  N  W D+S F  I++V+HF  TL+ DV++V  +P  H   +    ++ 
Sbjct: 117 MNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAF 176

Query: 259 ENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLP-PDLQKLRCKVAFHALRFA 317
           + + P +    W      K + E   + L     +L++ +  P+ Q+LRC+V +HALRF 
Sbjct: 177 QIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFK 236

Query: 318 APIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYL 377
             I +L   +  ++  +G ++++HLR E D+    GC      E  +I+ K R+   E  
Sbjct: 237 PHIMKLSESIVDKLRSQGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRK---ENF 293

Query: 378 TGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEF 437
             K  + + +RR  G CPLT  E+   L+A+   +S RIY+A GE FGG Q ++P    F
Sbjct: 294 ADK-RLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLF 352

Query: 438 PNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGG--NMGRAMQGHRAYV 495
           P L     +    ELS   ++    +A+DY+V L S++F+P++ G  N    + GHR Y 
Sbjct: 353 PRLDNHSSVDPSEELSA-TSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYY 411

Query: 496 GHRKYIKPNKKAMLPFF 512
           G R  I+P++KA+ P F
Sbjct: 412 GFRTTIRPDRKALAPIF 428





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query530
255540303572 conserved hypothetical protein [Ricinus 0.998 0.924 0.717 0.0
224136085559 predicted protein [Populus trichocarpa] 0.988 0.937 0.707 0.0
297734384562 unnamed protein product [Vitis vinifera] 0.981 0.925 0.686 0.0
297797335559 hypothetical protein ARALYDRAFT_332561 [ 0.964 0.914 0.653 0.0
449469771559 PREDICTED: DUF246 domain-containing prot 0.983 0.932 0.637 0.0
449521379559 PREDICTED: DUF246 domain-containing prot 0.983 0.932 0.631 0.0
15242752559 O-fucosyltransferase family protein [Ara 0.958 0.908 0.642 0.0
52354589559 hypothetical protein AT5G63390 [Arabidop 0.769 0.729 0.757 0.0
225456264433 PREDICTED: DUF246 domain-containing prot 0.743 0.909 0.771 0.0
255559237589 conserved hypothetical protein [Ricinus 0.983 0.884 0.545 1e-155
>gi|255540303|ref|XP_002511216.1| conserved hypothetical protein [Ricinus communis] gi|223550331|gb|EEF51818.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/538 (71%), Positives = 446/538 (82%), Gaps = 9/538 (1%)

Query: 1   MARARNIKNSFITQTPSPLFQLFSISPFTSLFLSPKKSPRSHQRLF-----TSQNFAIFF 55
           MARARNIKN F T  PSP+F L S+SP TSL  SPKKSPR+H   F     TS+ F+IFF
Sbjct: 1   MARARNIKNPFFTLIPSPVFPLVSVSPLTSLLFSPKKSPRNHIDKFFSLSTTSRTFSIFF 60

Query: 56  LSLLLTFTFLGVSVLNFIQSYQDPPPCSLISPSSQNPLSSN---SAMLFASLASSNTYNE 112
           +SLL++F+ LG+ +L+     QD   C+     S +    +   S  L AS +S +  + 
Sbjct: 61  ISLLVSFSLLGMFILSLFPISQDSVSCNSFISPSSSLSFPSKSISHRLLASFSSRSLSHV 120

Query: 113 DDHEPAGLANSVLVPLPAQLVAGNLSKEEREFWQQPGSEGYKPCLDFSLAYRRKSAKISK 172
              +P GLA SV+VPLP Q V GN+SKEE EFW+QP  EGYKPCLDFS+ YR+ S++ISK
Sbjct: 121 KGDKP-GLAKSVMVPLPVQGVTGNVSKEESEFWEQPDGEGYKPCLDFSINYRKASSRISK 179

Query: 173 EKRKFLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKH 232
           EKR+FLVVVASGGLNQQR QIVDAVVIARILEAALVVPVLQVNLIWGD+SEFSDIF+V+H
Sbjct: 180 EKRRFLVVVASGGLNQQRTQIVDAVVIARILEAALVVPVLQVNLIWGDDSEFSDIFDVEH 239

Query: 233 FKRTLQADVRVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDT 292
           FKR LQADVR+VSSLPSTHLMSRQSIENQ+P ++SP WIRARF ++LNEEGVLVLKGL +
Sbjct: 240 FKRILQADVRIVSSLPSTHLMSRQSIENQIPIDVSPLWIRARFSRKLNEEGVLVLKGLAS 299

Query: 293 KLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRT 352
           KLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLR+EKDVWVR+
Sbjct: 300 KLSKNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRLEKDVWVRS 359

Query: 353 GCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPS 412
           GCLTGLG EYD II+++R SQ EYLTG+LNMSH++RRLAGLCPL A E+AR LKALG  S
Sbjct: 360 GCLTGLGAEYDRIISQVRNSQTEYLTGRLNMSHMERRLAGLCPLNAIEMARLLKALGVSS 419

Query: 413 SARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLN 472
           +ARIYIAGGEPFGG Q  QPL AEF NLVTK+MLA+EGEL PY+ +SS++AAIDYIVSL+
Sbjct: 420 NARIYIAGGEPFGGVQTAQPLVAEFHNLVTKDMLAREGELLPYIKKSSAMAAIDYIVSLS 479

Query: 473 SNVFVPSHGGNMGRAMQGHRAYVGHRKYIKPNKKAMLPFFEDSSISDEEFGSIIRKIH 530
           SNVF+PSHGGNMGR MQGHRAYVGH K IKPNK++M+PF E SS+SD EFGSI R +H
Sbjct: 480 SNVFIPSHGGNMGRLMQGHRAYVGHWKCIKPNKRSMIPFLEKSSLSDAEFGSIARMLH 537




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136085|ref|XP_002322236.1| predicted protein [Populus trichocarpa] gi|222869232|gb|EEF06363.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297734384|emb|CBI15631.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297797335|ref|XP_002866552.1| hypothetical protein ARALYDRAFT_332561 [Arabidopsis lyrata subsp. lyrata] gi|297312387|gb|EFH42811.1| hypothetical protein ARALYDRAFT_332561 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449469771|ref|XP_004152592.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449521379|ref|XP_004167707.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15242752|ref|NP_201144.1| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|9758280|dbj|BAB08804.1| auxin-independent growth promoter-like protein [Arabidopsis thaliana] gi|332010359|gb|AED97742.1| O-fucosyltransferase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|52354589|gb|AAU44615.1| hypothetical protein AT5G63390 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225456264|ref|XP_002279576.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255559237|ref|XP_002520639.1| conserved hypothetical protein [Ricinus communis] gi|223540159|gb|EEF41735.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query530
TAIR|locus:2167311559 AT5G63390 [Arabidopsis thalian 0.769 0.729 0.757 1.5e-175
TAIR|locus:2050564573 AT2G44500 [Arabidopsis thalian 0.735 0.680 0.620 4.6e-135
TAIR|locus:2077482579 AT3G07900 [Arabidopsis thalian 0.732 0.670 0.610 1.2e-127
TAIR|locus:2157096652 AT5G35570 [Arabidopsis thalian 0.701 0.570 0.385 8.2e-67
TAIR|locus:2174754522 AT5G64600 [Arabidopsis thalian 0.741 0.752 0.384 1.7e-66
TAIR|locus:2014619 572 AT1G76270 [Arabidopsis thalian 0.722 0.669 0.391 6.7e-65
TAIR|locus:2009467565 AT1G22460 [Arabidopsis thalian 0.677 0.635 0.391 8.5e-65
TAIR|locus:2143181508 AT5G15740 [Arabidopsis thalian 0.658 0.687 0.373 1.6e-63
TAIR|locus:2080285638 AT3G54100 [Arabidopsis thalian 0.716 0.595 0.368 2e-63
TAIR|locus:2150129631 FRB1 "FRIABLE 1" [Arabidopsis 0.709 0.595 0.386 4.2e-63
TAIR|locus:2167311 AT5G63390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1664 (590.8 bits), Expect = 1.5e-175, Sum P(2) = 1.5e-175
 Identities = 310/409 (75%), Positives = 366/409 (89%)

Query:   123 SVLVPLPAQLV-AGNLSKEEREFWQQPGSEGYKPCLDFSLAYRRKSAKISKEKRKFLVVV 181
             S L PLPA+   +GN+++EE+EFW+QP  EGYKPCLDFSL Y++KSA +SKEK++FLVVV
Sbjct:   112 STLFPLPARGGHSGNMTEEEKEFWKQPNGEGYKPCLDFSLEYKKKSASVSKEKKRFLVVV 171

Query:   182 ASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRTLQADV 241
              SGGLNQQRNQIVDAVVIA ILEAALVVPVLQVN +WGDESEFSD+F+V+HFK+TL++DV
Sbjct:   172 VSGGLNQQRNQIVDAVVIAMILEAALVVPVLQVNRVWGDESEFSDLFDVEHFKKTLRSDV 231

Query:   242 RVVSSLPSTHLMSRQSIENQLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPD 301
             R+VSSLPSTHLMSRQ+IENQ+P+++SP WIRA++FKQLNEEG+LVLKGLD+KL+KNLPPD
Sbjct:   232 RIVSSLPSTHLMSRQTIENQIPWDVSPVWIRAKYFKQLNEEGLLVLKGLDSKLAKNLPPD 291

Query:   302 LQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRMEKDVWVRTGCLTGLGLE 361
             LQKLRCKVAFHALRFAAPI+ LGN+L RRMWIEGPYIALHLR+EKDVWVRTGCLTGLG E
Sbjct:   292 LQKLRCKVAFHALRFAAPIENLGNKLTRRMWIEGPYIALHLRLEKDVWVRTGCLTGLGSE 351

Query:   362 YDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGG 421
             +D IIA+ R SQP YLTG+LN+++ +RRLAG CPL   EIAR LKALGAPS+A IYIAGG
Sbjct:   352 FDRIIAETRTSQPRYLTGRLNLTYTERRLAGFCPLNVYEIARLLKALGAPSNASIYIAGG 411

Query:   422 EPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHG 481
             EPFGG +AL+PLA EF NLVTKE LA +GEL PY NRSS+LAAIDYIVSL+S+VF+PSHG
Sbjct:   412 EPFGGSRALEPLAKEFSNLVTKETLAHKGELLPYTNRSSALAAIDYIVSLSSDVFIPSHG 471

Query:   482 GNMGRAMQGHRAYVGHRKYIKPNKKAMLPFFEDSSISDEEFGSIIRKIH 530
             GNM +AMQG+RAYVGHRK+I PNK+AMLP  E+SS+SD E   + RK+H
Sbjct:   472 GNMAKAMQGNRAYVGHRKFIMPNKRAMLPLMENSSVSDAELSFLTRKLH 520


GO:0005794 "Golgi apparatus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2050564 AT2G44500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077482 AT3G07900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014619 AT1G76270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150129 FRB1 "FRIABLE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00017906001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (562 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query530
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-130
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 4e-97
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 1e-09
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  380 bits (979), Expect = e-130
 Identities = 146/326 (44%), Positives = 196/326 (60%), Gaps = 40/326 (12%)

Query: 177 FLVVVASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESEFSDIFNVKHFKRT 236
           +L+V A+GGLNQQR+QI DAV +AR+L A LV+P L  N +WGD S+F DI++V HF ++
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 237 LQADVRVVSSLPSTHLMSRQSIEN-QLPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLS 295
           L+ DVRVV  LP      +  I   ++P   SP +        L + GV+ L   D++L+
Sbjct: 61  LKDDVRVVKKLPEELASKKPEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLA 120

Query: 296 -KNLPPDLQKLRCKVAFHALRFAAPIQELGNRLARRMW-IEGPYIALHLRMEKDVWVRTG 353
              LPP++Q+LRC+V FHALRF   I+ELG++L  R+    GP++ALHLR EKD+   +G
Sbjct: 121 NDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFSG 180

Query: 354 CLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSS 413
           C                                     G CPLT  E+   L+ALG P S
Sbjct: 181 C-------------------------------------GKCPLTPEEVGLLLRALGFPRS 203

Query: 414 ARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNS 473
            RIY+A GE +GG + L PL + FPNL TKE LA   EL+P+   SS LAA+DYIV L S
Sbjct: 204 TRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLES 263

Query: 474 NVFVPSHGGNMGRAMQGHRAYVGHRK 499
           +VFVP++GGN  +A+ GHR Y+GHRK
Sbjct: 264 DVFVPTYGGNFAKAVAGHRRYLGHRK 289


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 530
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 98.1
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 96.52
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=1.4e-56  Score=450.02  Aligned_cols=296  Identities=33%  Similarity=0.532  Sum_probs=206.8

Q ss_pred             EcCchhHHHHHHHHHHHHHHHhcCeEeccccccccccCCCCC-----CCcccchHHHHHhcccceEEeccCChhhhcccc
Q 048096          182 ASGGLNQQRNQIVDAVVIARILEAALVVPVLQVNLIWGDESE-----FSDIFNVKHFKRTLQADVRVVSSLPSTHLMSRQ  256 (530)
Q Consensus       182 ~nGGLNQqR~~IcDaVaVARiLNATLVlP~L~~~s~W~D~S~-----F~DIFD~dhFI~sL~~dVrIVk~LP~~~~~~~~  256 (530)
                      +.||+||||.++++||++|++||+|||||.+.....|+|.++     |+++||+++|++.++++|.+.+.+|........
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            789999999999999999999999999999999999999887     999999999999999999999999865433211


Q ss_pred             c------------------------------cccCCCC-CCCchhHHHHhHHhhhhc------ceEEEeccCccccCC-C
Q 048096          257 S------------------------------IENQLPY-NISPFWIRARFFKQLNEE------GVLVLKGLDTKLSKN-L  298 (530)
Q Consensus       257 ~------------------------------~~~~vp~-~~sp~~y~~~vlP~L~k~------~VI~l~~~d~RLa~~-l  298 (530)
                      .                              ....... ...+.||.++++|.+.++      +|+.|.++..++.++ +
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  165 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL  165 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence            0                              0111222 466778777799999886      999999999999987 7


Q ss_pred             CchhhhhhhhhcccccccchhHHHHHHHHHHHHH-hcCCeEEEeecchhhhHhhhcccCCCChhHHHHHHHHHhhccccc
Q 048096          299 PPDLQKLRCKVAFHALRFAAPIQELGNRLARRMW-IEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEYL  377 (530)
Q Consensus       299 P~diQrLRCrvnF~ALrF~p~I~~lg~~LV~RmR-~~GpyIALHLR~EkDMlAfsgC~~g~~~~e~~el~~~R~~~~~~~  377 (530)
                      +.++||        +|+|+++|+++|++++++|+ ..++|||+|||+|+||  +++|.+++   +...++.+|+.     
T Consensus       166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~-----  227 (351)
T PF10250_consen  166 DRDLQR--------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRCW-----  227 (351)
T ss_dssp             GGGGGG--------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT-T-------TTTHHHH-----
T ss_pred             CccceE--------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--HhhcccCC---chHHHHHhHhh-----
Confidence            888987        99999999999999999999 7899999999999999  89999954   77888888876     


Q ss_pred             cCcccCChHhHhhcCCCCCCHHHHHHHHHhcCCCCCceEEEeecccCCccccchhHHhhCCCcccccccCCccccccccc
Q 048096          378 TGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFGGHQALQPLAAEFPNLVTKEMLAQEGELSPYVN  457 (530)
Q Consensus       378 ~~~~~i~~~~rR~~G~CPLTPeEvgl~L~ALGf~~~T~IYlAaGeiyGg~~~L~pL~~~FPnl~tKetLas~eEL~pF~~  457 (530)
                       ++..+.+...+..|.||++|++++.+++++|+.+.|.||||++++|||.+.|.+|++.||++++|+++.+.+|+++|.+
T Consensus       228 -~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  306 (351)
T PF10250_consen  228 -GKKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND  306 (351)
T ss_dssp             --GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S-----
T ss_pred             -ccccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc
Confidence             2334566677889999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             cccccchhheeeecCCceeecCCCCchhhhhhhcccccCCC
Q 048096          458 RSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHR  498 (530)
Q Consensus       458 ~ss~~AALDYiVcl~SDVFV~t~~GNfa~~V~GhR~y~G~~  498 (530)
                        .++|+||++||++||+||+|..++|+.+|+++|.|.|..
T Consensus       307 --~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~  345 (351)
T PF10250_consen  307 --DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKP  345 (351)
T ss_dssp             --S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS
T ss_pred             --cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCC
Confidence              999999999999999999999999999999999999965



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query530
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 6e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.0 bits (121), Expect = 8e-07
 Identities = 70/454 (15%), Positives = 133/454 (29%), Gaps = 151/454 (33%)

Query: 40  RSHQRLFTSQNFAIFFLSLLLTFTFLGVSVLNFIQS--YQ-DPPPCSLISPSSQNPLSSN 96
            S+ ++    +F IF+L+L    +    +VL  +Q   YQ DP   S    SS   L  +
Sbjct: 172 LSY-KVQCKMDFKIFWLNLKNCNS--PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228

Query: 97  SA-----MLFAS----------------------------------------LASSNTYN 111
           S       L  S                                        L+++ T +
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288

Query: 112 ED-DHEPAG---------LANSVLVP---LPAQLVAGN---LS------KEER---EFWQ 146
              DH             L   +      LP +++  N   LS      ++     + W+
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348

Query: 147 QPGSEGYKPCLDFSLAYRRKSAKISKEKRKFLVVVASGGLNQQRNQIVDAVVIARILEAA 206
               +     ++ SL           E RK    ++                   +   +
Sbjct: 349 HVNCDKLTTIIESSLNVLE-----PAEYRKMFDRLS-------------------VFPPS 384

Query: 207 LVVP--VLQVNLIWGDESEFSDIFNVKHF-KRTL--QADVRVVSSLPSTHLMSRQSIENQ 261
             +P  +L +  IW D  +   +  V    K +L  +       S+PS +L  +  +EN+
Sbjct: 385 AHIPTILLSL--IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442

Query: 262 LPYNISPFWIRARFFKQLNEEGVLVLKGLDTKLSKNLPPDLQKLRCKVAFHALRFAAPIQ 321
                    +        N     + K  D+      P   Q     +  H L+     +
Sbjct: 443 YA-------LHRSIVDHYN-----IPKTFDSD-DLIPPYLDQYFYSHIGHH-LKNIEHPE 488

Query: 322 ELGNRLARRM-----WIEGPYIALHLRMEKDVWVRTGCLTGLGLEYDEIIAKIRESQPEY 376
            +   L R +     ++E       +R +   W  +G +     +       I ++ P+Y
Sbjct: 489 RM--TLFRMVFLDFRFLEQ-----KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY 541

Query: 377 LTGKLNMSHIQRRLAGLCPLTASEIARFLKALGA 410
                     +R +        + I  FL  +  
Sbjct: 542 ----------ERLV--------NAILDFLPKIEE 557


>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query530
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.54
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 99.24
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 97.85
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 97.7
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.54  E-value=3.1e-14  Score=147.04  Aligned_cols=297  Identities=14%  Similarity=0.202  Sum_probs=168.4

Q ss_pred             cCCcEEEEEE-cC-chhHHHHHHHHHHHHHHHhcCe----EeccccccccccCC------CCCCCcccchHHHHHhcccc
Q 048096          173 EKRKFLVVVA-SG-GLNQQRNQIVDAVVIARILEAA----LVVPVLQVNLIWGD------ESEFSDIFNVKHFKRTLQAD  240 (530)
Q Consensus       173 ~snGYL~V~~-nG-GLNQqR~~IcDaVaVARiLNAT----LVlP~L~~~s~W~D------~S~F~DIFD~dhFI~sL~~d  240 (530)
                      ..++||+-.. .| |.|.||...-.|.++|+.||.|    ||||-...-.=|..      .-+|++.||++++.    ..
T Consensus        20 ~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L~----~~   95 (408)
T 4ap5_A           20 SRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLN----KN   95 (408)
T ss_dssp             CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHHH----TT
T ss_pred             cccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHHH----hh
Confidence            5789999975 45 8999999999999999999999    99996643222432      24799999998743    34


Q ss_pred             eEEec------cCChhh----------hc-------cccc----cccC-------CCCCCCchhHHH-------------
Q 048096          241 VRVVS------SLPSTH----------LM-------SRQS----IENQ-------LPYNISPFWIRA-------------  273 (530)
Q Consensus       241 VrIVk------~LP~~~----------~~-------~~~~----~~~~-------vp~~~sp~~y~~-------------  273 (530)
                      |+|+.      ++-..+          ..       ..+.    ....       .-+...|.|-..             
T Consensus        96 vpVI~meeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c~~~~  175 (408)
T 4ap5_A           96 IPVIEYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQ  175 (408)
T ss_dssp             SCEEEHHHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEEEEEC
T ss_pred             CCeeEHHHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCceeEEEe
Confidence            44441      110000          00       0000    0000       000012233111             


Q ss_pred             ----HhHHhhhhcc---eEEEeccCccccCCCC-chhhhhhhhhcccccccchhHHHHHHHHHHHHHhcCCeEEEeecch
Q 048096          274 ----RFFKQLNEEG---VLVLKGLDTKLSKNLP-PDLQKLRCKVAFHALRFAAPIQELGNRLARRMWIEGPYIALHLRME  345 (530)
Q Consensus       274 ----~vlP~L~k~~---VI~l~~~d~RLa~~lP-~diQrLRCrvnF~ALrF~p~I~~lg~~LV~RmR~~GpyIALHLR~E  345 (530)
                          .+.|.+.+..   -+-+..+...|++... .+...+|     ..|+|++.|.+.|++.++..- .++|+++|+|.+
T Consensus       176 ~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L-~~~~~~~h~r~~  249 (408)
T 4ap5_A          176 GSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHL-NSTDDADRIPFQ  249 (408)
T ss_dssp             SBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHH-CCCTTTTTCCCC
T ss_pred             ecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHh-Ccccceeecccc
Confidence                1123332221   1122222233332211 2222322     479999999999999888765 468999999999


Q ss_pred             hhhHhhhcccCCCChhHHHHHHHHHhhccccccCcccCChHhHhhcCCCCCCHHHHHHHHHhcCCCCCceEEEeecccCC
Q 048096          346 KDVWVRTGCLTGLGLEYDEIIAKIRESQPEYLTGKLNMSHIQRRLAGLCPLTASEIARFLKALGAPSSARIYIAGGEPFG  425 (530)
Q Consensus       346 kDMlAfsgC~~g~~~~e~~el~~~R~~~~~~~~~~~~i~~~~rR~~G~CPLTPeEvgl~L~ALGf~~~T~IYlAaGeiyG  425 (530)
                      .|+...  |.......-.    .  +.--|+..++...     -....||-.++-+..+.+.|.=-+-+.||||+-+   
T Consensus       250 ~dw~~~--~~~~~~~~~~----~--y~~~H~Rr~d~~~-----~~~~~~ps~~~~~~~i~~~~~~~~~~~VyiATD~---  313 (408)
T 4ap5_A          250 EDWMKM--KVKLGSALGG----P--YLGVHLRRKDFIW-----GHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDA---  313 (408)
T ss_dssp             SSGGGC--CCCTTCBCCE----E--EEEEEECCTTTTT-----TTCSSSCCHHHHHHHHHHHHHHHTCSCEEEEECC---
T ss_pred             hhHhhh--hcccccccCC----C--ccccccccccchh-----hhhccCCCHHHHHHHHHHHHHhcCCCEEEEeCCC---
Confidence            888654  4332110000    0  0000111111100     0112233333333333333322234589999876   


Q ss_pred             ccccchhHHhhCCCcccccccCCccccccccccccccchhheeeecCCceeecCCCCchhhhhhhcccccCCCc
Q 048096          426 GHQALQPLAAEFPNLVTKEMLAQEGELSPYVNRSSSLAAIDYIVSLNSNVFVPSHGGNMGRAMQGHRAYVGHRK  499 (530)
Q Consensus       426 g~~~L~pL~~~FPnl~tKetLas~eEL~pF~~~ss~~AALDYiVcl~SDVFV~t~~GNfa~~V~GhR~y~G~~k  499 (530)
                      .+..+..|++.+|.++.-..  ..+++..+  .....|.||-+||.+||+||+|..++|+..|.=.|.+.|+..
T Consensus       314 ~~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~  383 (408)
T 4ap5_A          314 VRKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDP  383 (408)
T ss_dssp             CHHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCG
T ss_pred             chhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCC
Confidence            34557789999987653221  12333333  234578999999999999999999999999999999999864



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00