Citrus Sinensis ID: 048173

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
DVLQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKSTEPERVVIDGCSREGAKLGGFPPSLDTVHDSGDLATFEKVHCSNMTVGAAQIGADTGAKHCSFSQGQRREDRPVSITSVVFVSKEFQPNGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI
Secondary Structure (PSIPRED)
cHHHHHHHHccccccccccccccHHHHccccccHHHHHHccccccccccEEEEEEEcccccccHHEEEEEEEEEEcccccccccHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHcccEEEccccccEEEEEccccccHHHHHHHHccccHHHHHHHHHccccccccccEEccHHHHHHccccHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHccccccccccccHHHHHcccccHHHHHHcHHHHcccHHHHHcHHHEccccccHHHEEEEEEEEEEcccccEEEEEHHHEcHHHHHccHHHHHHHHHHHHHHHccEEEEEEEcccccccHHHHHHccccEEEEEcccccccEccccHHHHccccccEEEEccccHHHHHcccccccccccccccccccccccccccccccEcEccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEcccHHHHHHHHHHHccEEEccccccEEEEEcHHHHHHHHHHHHHHHHcHHHHHHHHHccccccccccccccHHHHHHccccHHHHHHHHHHcccHHHccc
Coil and Loop (DISEMBL)
DVLQIYSRELLSMNyagkrsifpekcvlngilpneLYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIvpadtqyaevPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRtifcwddkesSFFFLKQVQDFASVAevdtegragrlplrqkfrkstepervvidgcsregaklggfppsldtvhdsgdlatfekvhcsnmtvgaaqigadtgakhcsfsqgqrredrpvsiTSVVFVskefqpngkcfrITLMniaddskkvhltknlrgavtsdgitstHVVAGKVRKTLNFFTALSWivspswlkesfgegrfvdesfymLNDDGYVLKYRSELKDAVLRAKarpggllkri
Flexible Loop (DISEMBL)
DVLQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAevdtegragrlplrqkfrkstepervvidGCSREGAKLGGFPPSLDTVHDSGDLATFEKVHCSNMTVGAAQIGADTGAKHCSfsqgqrredrpvSITSVvfvskefqpngkCFRITLMNIADDSKKVHLTKNLrgavtsdgitsthvVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVlrakarpggllkri
Low Complexity Region (SEG)
DVLQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGrllylklrkrlQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKSTEPERVVIDGCSREGAKLGGFPPSLDTVHDSGDLATFEKVHCSNMTVGAAQIGADTGAKHCSFSQGQRREDRPVSITSVVFVSKEFQPNGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI
Disordered region (IsUnstruct)
***QIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVD***********************VIDGC*************LDTVHDSGDLATFEKVHCSNMTVGAAQIGADTGAKHC************VSITSVVFVSKEFQPNGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVL*************
Disordered Region (DISOPRED)
*VLQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW********************************************************************************************************************************************ADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLK**
Disordered Region (DISEMBL)
DVLQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKSTEPERVVIDGCSREGAKLGGFPPSLDTVHDSGDLATFEKVHCSNMTVGAAQIGADTGA**************PVSITSVVFVSKEFQPNGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI
Disordered Region (DISPRO)
DVLQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKSTEPERVVIDGCSREG*****************D*A*FEKV*C**MTV*AAQ*******************DRPVSITSVVFVSKEFQPNGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARP*G*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DVLQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKSTEPERVVIDGCSREGAKLGGFPPSLDTVHDSGDLATFEKVHCSNMTVGAAQIGADTGAKHCSFSQGQRREDRPVSITSVVFVSKEFQPNGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
A0JNA8	984	PAX-interacting protein 1	yes	no	0.222	0.081	0.385	3e-08
Q6ZW49	1069	PAX-interacting protein 1	yes	no	0.222	0.074	0.361	2e-07
Q90WJ3	1256	PAX-interacting protein 1	N/A	no	0.222	0.063	0.361	4e-07
Q6NZQ4	1056	PAX-interacting protein 1	yes	no	0.222	0.075	0.361	6e-07
Q10337	878	BRCT-containing protein 1	yes	no	0.242	0.099	0.288	0.0005

>sp|A0JNA8|PAXI1_BOVIN PAX-interacting protein 1 OS=Bos taurus GN=PAXIP1 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 273 LRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLN 329
           L G V       TH++A KV +T+ F TA+S    IV+P WL+E F   +FVDE  Y+L 
Sbjct: 804 LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFVDEQNYLLR 863

Query: 330 DDGYVLKYRSELKDAVLRAKARP 352
           D    + +   L++++ RA A P
Sbjct: 864 DAEAEVLFSFSLEESLRRAHASP 886

Involved in DNA damage response and in transcriptional regulation through histone methyltransferase (HMT) complexes. Plays a role in early development. In DNA damage response is required for cell survival after ionizing radiation. In vitro shown to be involved in the homologous recombination mechanism for the repair of double-strand breaks (DSBs). Its localization to DNA damage foci requires RNF8 and UBE2N. Recruits TP53BP1 to DNA damage foci and, at least in particular repair processes, effective DNA damage response appears to require the association with TP53BP1 phosphorylated by ATM. Together with TP53BP1 regulates ATM association. Recruits PA1 to sites of DNA damage and the PA1:PAXIP1 complex is required for cell survival in response to DNA damage; the function is probbaly independent of MLL-containing histone methyltransferase (HMT) complexes. Promotes ubiquitination of PCNA following UV irradiation and may regulate recruitment of polymerase eta and RAD51 to chromatin after DNA damage. Proposed to be involved in transcriptional regulation by linking MLL-containing histone methyltransferase (HMT) complexes to gene promoters by interacting with promoter-bound transcription factors such as PAX2. Associates with gene promoters that are known to be regulated by MLL2. During immunoglobulin class switching in activated B-cells is involved in trimethylation of histone H3 at 'Lys-4' and in transcription initiation of downstream switch regions at the immunoglobulin heavy-chain (Igh) locus; this function appears to involve the recruitment of MLL-containing HMT complexes.
Bos taurus (taxid: 9913)

>sp|Q6ZW49|PAXI1_HUMAN PAX-interacting protein 1 OS=Homo sapiens GN=PAXIP1 PE=1 SV=2

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 273 LRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLN 329
           L G V       TH++A KV +T+ F TA+S    IV+P WL+E F   +F+DE  Y+L 
Sbjct: 889 LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFIDEQNYILR 948

Query: 330 DDGYVLKYRSELKDAVLRAKARP 352
           D    + +   L++++ RA   P
Sbjct: 949 DAEAEVLFSFSLEESLKRAHVSP 971

Involved in DNA damage response and in transcriptional regulation through histone methyltransferase (HMT) complexes. Plays a role in early development. In DNA damage response is required for cell survival after ionizing radiation. In vitro shown to be involved in the homologous recombination mechanism for the repair of double-strand breaks (DSBs). Its localization to DNA damage foci requires RNF8 and UBE2N. Recruits TP53BP1 to DNA damage foci and, at least in particular repair processes, effective DNA damage response appears to require the association with TP53BP1 phosphorylated by ATM at 'Ser-25'. Together with TP53BP1 regulates ATM association. Recruits PA1 to sites of DNA damage and the PA1:PAXIP1 complex is required for cell survival in response to DNA damage; the function is probbaly independent of MLL-containing histone methyltransferase (HMT) complexes. Promotes ubiquitination of PCNA following UV irradiation and may regulate recruitment of polymerase eta and RAD51 to chromatin after DNA damage. Proposed to be involved in transcriptional regulation by linking MLL-containing histone methyltransferase (HMT) complexes to gene promoters by interacting with promoter-bound transcription factors such as PAX2. Associates with gene promoters that are known to be regulated by MLL2. During immunoglobulin class switching in activated B-cells is involved in trimethylation of histone H3 at 'Lys-4' and in transcription initiation of downstream switch regions at the immunoglobulin heavy-chain (Igh) locus; this function appears to involve the recruitment of MLL-containing HMT complexes.

Homo sapiens (taxid: 9606)

>sp|Q90WJ3|PAXI1_XENLA PAX-interacting protein 1 OS=Xenopus laevis GN=paxip1 PE=1 SV=1

 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 273  LRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLN 329
            L G V       TH+VA KV +T+ F TA+S    IV+P WL ESF   +F +E  Y+L 
Sbjct: 1076 LGGEVADTAQKCTHLVANKVTRTVKFLTAISVAKHIVTPEWLDESFKSQKFAEEQNYILR 1135

Query: 330  DDGYVLKYRSELKDAVLRAKARP 352
            D    + +   L++++ +A   P
Sbjct: 1136 DAEAEVLFCFSLEESLKKAHVNP 1158

Involved in DNA damage response. Promotes ubiquitination of PCNA following UV irradiation and may regulate recruitment of polymerase eta and rad51 to chromatin after DNA damage. May function as transcriptional cofactor in TGF beta signaling. Accentuates smad2-dependent transcription.

Xenopus laevis (taxid: 8355)

>sp|Q6NZQ4|PAXI1_MOUSE PAX-interacting protein 1 OS=Mus musculus GN=Paxip1 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 273 LRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLN 329
           L G V       TH++A KV +T+ F TA+S    IV+P WL+E F    F+DE  Y+L 
Sbjct: 876 LGGEVAECTKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQTFIDEQNYILR 935

Query: 330 DDGYVLKYRSELKDAVLRAKARP 352
           D    + +   L++++ RA   P
Sbjct: 936 DAEAEVLFSFSLEESLKRAHVSP 958

Involved in DNA damage response and in transcriptional regulation through histone methyltransferase (HMT) complexes. Plays a role in early development. In DNA damage response is required for cell survival after ionizing radiation. In vitro shown to be involved in the homologous recombination mechanism for the repair of double-strand breaks (DSBs). Its localization to DNA damage foci requires Rnf8 and Ube2n. Recruits Tp53bp1 to DNA damage foci and, at least in particular repair processes, effective DNA damage response appears to require the association with Tp53bp1 phosphorylated by Atm. Together with Tp53bp1 regulates Atm association. Recruits Pa1 to sites of DNA damage and the Pa1:Paxip1 complex is required for cell survival in response to DNA damage; the function is probbaly independent of MLL-containing histone methyltransferase (HMT) complexes. Promotes ubiquitination of PCNA following UV irradiation and may regulate recruitment of polymerase eta and Rad51 to chromatin after DNA damage. Proposed to be involved in transcriptional regulation by linking MLL-containing histone methyltransferase (HMT) complexes to gene promoters by interacting with promoter-bound transcription factors such as Pax2. Associates with gene promoters that are known to be regulated by Mll2. During immunoglobulin class switching in activated B-cells is involved in trimethylation of histone H3 at 'Lys-4' and in transcription initiation of downstream switch regions at the immunoglobulin heavy-chain (Igh) locus; this function appears to involve the recruitment of MLL-containing HMT complexes.

Mus musculus (taxid: 10090)

>sp|Q10337|BRC1_SCHPO BRCT-containing protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=brc1 PE=1 SV=1

 Score = 45.8 bits (107), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 271 KNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSW---IVSPSWLKESFGEGRFVDESFYM 327
           K L  ++TS+    TH++A ++ +T  F  ++ +   +V+  W+         VDE  Y+
Sbjct: 684 KKLDMSITSNPSKCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEPYL 743

Query: 328 LNDDGYVLKYRSELKDAVLRAKARPGGLLK 357
           LND    L+    L+ A+ RA+A+   LL+
Sbjct: 744 LNDPEKELELGCTLESALKRARAQGPSLLE 773

Required for mitotic fidelity, specifically in the G2 phase of the cell cycle. Plays a role in chromatin organization.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
357133918	587	PREDICTED: uncharacterized protein LOC10	0.938	0.574	0.364	2e-56
115463567	612	Os05g0376600 [Oryza sativa Japonica Grou	0.916	0.537	0.317	1e-41
224086906	531	predicted protein [Populus trichocarpa]	0.359	0.242	0.674	2e-40
297739885	666	unnamed protein product [Vitis vinifera]	0.389	0.210	0.554	5e-40
225441345	676	PREDICTED: uncharacterized protein LOC10	0.389	0.207	0.554	5e-40
147836147	1945	hypothetical protein VITISV_041860 [Viti	0.969	0.178	0.344	5e-39
449529471	383	PREDICTED: uncharacterized LOC101209162	0.389	0.365	0.542	5e-38
449467739	210	PREDICTED: uncharacterized LOC101209162,	0.389	0.666	0.542	1e-37
87241454	650	GCN5-related N-acetyltransferase; BRCT [	0.392	0.216	0.515	1e-36
356503415	649	PREDICTED: uncharacterized protein LOC10	0.392	0.217	0.515	4e-36

>gi|357133918|ref|XP_003568568.1| PREDICTED: uncharacterized protein LOC100845185 [Brachypodium distachyon]

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/425 (36%), Positives = 223/425 (52%), Gaps = 88/425 (20%)

Query: 1   DVLQIYSRELLSMNYA---GKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVV 57
           + L +Y  EL +M+YA   GK+S F EKC++NG      Y+  +             +  
Sbjct: 91  EALTLYKNELPTMDYAADTGKKSGFLEKCIING-----KYKTLI------------LRSR 133

Query: 58  SFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI 117
           S   L +++AAV YQIVPADTQYAE+PLA V S +Q  G G LLY +L +RLQ+VG+ TI
Sbjct: 134 SAAGLEEIIAAVSYQIVPADTQYAEIPLAVVRSHFQRVGFGHLLYKELSQRLQNVGVNTI 193

Query: 118 FCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKS---TEPERVVIDGCSRE 174
           FCW DK S  F+LK  Q F SV EVD++G+  R+P+R   R++        +++    +E
Sbjct: 194 FCWADKVSEGFWLK--QGFVSVGEVDSKGKIRRIPVRADIRRALCFPGSSTLMVTHLKKE 251

Query: 175 --------GAKLGGF------PPSLDTVHDSGDLATFEKVHCSNMTVGA--AQIGADTGA 218
                    AKL         P   DT   S + +  +   C  ++     A+ G+ TG 
Sbjct: 252 LPTPPIIPLAKLPAMVPDSISPGGTDTAVPSCEKSVPQTFGCHKVSKAGQVARNGSFTGT 311

Query: 219 KHCSFSQGQRR----------------------------------EDRPVSITSVVFVSK 244
             CS S  Q +                                  +  P + +  V V +
Sbjct: 312 GGCSSSDQQSKKRISETSSSSLKSKRVRCSGHADYKQDMKQNDICDSTPCTPSMSVHVER 371

Query: 245 EFQPNGK---CFR----ITLMNIADDSKKVHLT---KNLRGAVTSDGITSTHVVAGKVRK 294
           +   + K   C      + LMNIAD++KK+ LT   + L G VTS+G + THVV GK R+
Sbjct: 372 KLSGDAKGAICSNGRPSVMLMNIADETKKIRLTEVVEMLGGFVTSEGSSCTHVVTGKARR 431

Query: 295 TLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKAR 351
           T+NF  ALS   WIVSP+WLK+SF +G+FV ES ++L+D+ Y +KY+SE++DAV+RA+ R
Sbjct: 432 TMNFCIALSSGAWIVSPNWLKQSFKQGKFVGESEHVLDDEEYKMKYKSEMRDAVMRAQER 491

Query: 352 PGGLL 356
           P  L 
Sbjct: 492 PCSLF 496

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115463567|ref|NP_001055383.1| Os05g0376600 [Oryza sativa Japonica Group] gi|51038084|gb|AAT93887.1| unknown protein [Oryza sativa Japonica Group] gi|113578934|dbj|BAF17297.1| Os05g0376600 [Oryza sativa Japonica Group] gi|215706889|dbj|BAG93349.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 210/454 (46%), Gaps = 125/454 (27%)

Query: 1   DVLQIYSRELLSMNYA---GKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVV 57
           +VL +Y +EL +M+YA   G++S F EKCV NG                       YK +
Sbjct: 96  EVLLLYKQELPTMDYAANTGRKSGFLEKCVTNG----------------------KYKTL 133

Query: 58  ---SFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI 114
              S     +V AA+ YQ+VPADTQYAE+PLA V   YQ  G+G+LLY +L +RL++VG+
Sbjct: 134 VLSSTAGYEEVTAALSYQLVPADTQYAEIPLAVVRPPYQRVGIGQLLYKELSQRLRNVGV 193

Query: 115 RTIFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKS-------------- 160
            TIFCW D  S  F+LK  Q F SV EVDT+G+  R+P+R   +++              
Sbjct: 194 TTIFCWADNVSEGFWLK--QGFESVGEVDTKGKICRIPVRADIKRALCFPGGSMLMVSHL 251

Query: 161 ---TEPERVVIDGCSREGAKLGGFPPSLDTVHDSG-DLATFEK-----VHCSNMTVGAA- 210
                P++ ++   S++  +   F P   +  D+G    + EK     V C  ++  AA 
Sbjct: 252 KDLPAPQKSLLS--SQQTYQFHTFAPDSISPSDTGTSTPSCEKLLPQTVACHKVSKTAAV 309

Query: 211 QIGAD-TGAKHCSFSQGQRREDRPVSITSVVFVSK------------EFQPNGKCFR-IT 256
           +   D  G   CSFS  Q+   R    +S    SK            +   N  C + ++
Sbjct: 310 EKNEDFHGTGGCSFSD-QQENKRTHETSSSSLKSKRVRCSQHSDHHQDMNQNEICGKPLS 368

Query: 257 LMNIADDSKKVHLTKN------------------LRGAVTSDGITSTHV--VAGKVRKT- 295
           + N       VHL  N                   +  ++S+G  S  +  +A + +KT 
Sbjct: 369 ISNTPIHENSVHLMPNELSNPSMVGHVKSKISGDAKANISSNGSPSVMLMNIADETKKTQ 428

Query: 296 ------------------------------LNFFTAL---SWIVSPSWLKESFGEGRFVD 322
                                         +NF  AL   +WIVSP WLKESF +G+FV 
Sbjct: 429 LIEVVEMLGGVVTCEGNSCTHVITGKVRMTMNFCIALCSGAWIVSPKWLKESFKKGKFVG 488

Query: 323 ESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLL 356
           E+ Y+  DD + +KY+SEL+DAV+RAK RP  L 
Sbjct: 489 EAEYVFQDDEFKVKYKSELRDAVVRAKERPCSLF 522

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086906|ref|XP_002308001.1| predicted protein [Populus trichocarpa] gi|222853977|gb|EEE91524.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/135 (67%), Positives = 102/135 (75%), Gaps = 6/135 (4%)

Query: 229 REDRPVSITSVVFVSKEFQPNGKCFRITLMNIADDSKKVHLTK---NLRGAVTSDGITST 285
           +ED+  + TS V VSKEFQ  G+CFRI LMNIADD KK HLTK    L GAVT DG  ST
Sbjct: 308 KEDKSSNRTSEVLVSKEFQSKGECFRIMLMNIADDDKKTHLTKVIETLGGAVTPDGSVST 367

Query: 286 HVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELK 342
           HVV GKVR TLNF TALS   WIVS  WLKESF +GRFVDE  Y+L D+ YVLK+++ELK
Sbjct: 368 HVVTGKVRTTLNFCTALSSGAWIVSSKWLKESFRKGRFVDELPYILYDEEYVLKHKAELK 427

Query: 343 DAVLRAKARPGGLLK 357
           DAVLRA+ARP  LLK
Sbjct: 428 DAVLRARARPQALLK 442

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739885|emb|CBI30067.3| unnamed protein product [Vitis vinifera]

 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/164 (55%), Positives = 113/164 (68%), Gaps = 24/164 (14%)

Query: 1   DVLQIYSRELLSMNYA---GKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVV 57
           +VL IY  EL +MNYA   GK S+F E+CV NG                    CS+  + 
Sbjct: 116 EVLNIYKEELPAMNYAANTGKESMFLERCVSNG------------------KYCSLLLLS 157

Query: 58  SFLN-LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRT 116
           +F+   GKV+AAV YQI+PADTQYAE+PL AVSS +Q KG+GRLLY++LRKRLQ+VGIRT
Sbjct: 158 NFMEGPGKVIAAVTYQIIPADTQYAEIPLTAVSSNFQSKGIGRLLYIELRKRLQNVGIRT 217

Query: 117 IFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKS 160
           IFCW DKES  F+LK  Q F S+AEVDT+GRA RLP+R   R++
Sbjct: 218 IFCWGDKESEGFWLK--QGFVSIAEVDTKGRARRLPIRADIRRA 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441345|ref|XP_002274624.1| PREDICTED: uncharacterized protein LOC100245305 [Vitis vinifera]

 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/164 (55%), Positives = 113/164 (68%), Gaps = 24/164 (14%)

Query: 1   DVLQIYSRELLSMNYA---GKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVV 57
           +VL IY  EL +MNYA   GK S+F E+CV NG                    CS+  + 
Sbjct: 100 EVLNIYKEELPAMNYAANTGKESMFLERCVSNG------------------KYCSLLLLS 141

Query: 58  SFLN-LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRT 116
           +F+   GKV+AAV YQI+PADTQYAE+PL AVSS +Q KG+GRLLY++LRKRLQ+VGIRT
Sbjct: 142 NFMEGPGKVIAAVTYQIIPADTQYAEIPLTAVSSNFQSKGIGRLLYIELRKRLQNVGIRT 201

Query: 117 IFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKS 160
           IFCW DKES  F+LK  Q F S+AEVDT+GRA RLP+R   R++
Sbjct: 202 IFCWGDKESEGFWLK--QGFVSIAEVDTKGRARRLPIRADIRRA 243

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147836147|emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]

 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 147/427 (34%), Positives = 202/427 (47%), Gaps = 79/427 (18%)

Query: 1    DVLQIYSRELLSMNYA---GKRSIFPEKCVLNG------ILPNELYQLYMGSIHPL---- 47
            +VL IY  EL +MNYA   GK S+F E+CV NG      +L N +     G  H L    
Sbjct: 1439 EVLNIYKEELPAMNYAANTGKESMFLERCVSNGKYCSLLLLSNFMEGPGKGIGHLLYIEL 1498

Query: 48   ------INLCSMYKVVSFLNLGKVVAAVIYQIVPADTQ--YAEVPLAA-VSSIYQHKGVG 98
                  + +C+++      + G  +      I   DT+     +P+ A +       G  
Sbjct: 1499 RKRLQNVGICTIFCWGDKESEGFWLKQGFVSIAEVDTKGRARRLPIRADIRRALCFPGGS 1558

Query: 99   RLLYLKLRKRLQ---SVGIRTIFCWDDKESSFFFLKQVQDFASVAE-VDTEGRAGRLPLR 154
             L+   L K +    S  ++  F     E S     Q+Q    + E +DT     + P++
Sbjct: 1559 TLMVSHLSKDISANFSDAVKKSFSLKPHEKSSSLDVQIQGLGDIGESLDTL----KAPVQ 1614

Query: 155  QKFRKSTEPERVVIDG-------------CSREGAKLGGFPPSLDTVHDSGDLATFEKVH 201
                K+  P  +V DG             CS  GAK   +  SL ++  S  +    ++ 
Sbjct: 1615 TSL-KTFLPHVLVKDGFQKDDDMLDANCSCSAHGAKKRVWEASLSSLK-SKKVKGSHQIG 1672

Query: 202  C---SNMTVGAAQ--------IGADTGAKH--------------CSFSQGQRREDRPVSI 236
            C   SN  + +          +G   G                  S+ +    + RP+S 
Sbjct: 1673 CQLDSNWDIVSGNGKIDNVCFVGCSLGTTRNESLSEVLPRDILSSSYVEKNVEDCRPLSK 1732

Query: 237  TSVVFVSKEFQPNGKCFRITLMNIADDSKKVHLTK---NLRGAVTSDGITSTHVVAGKVR 293
              + F   E Q  G+ FRI LMNIADD+KK HLTK   +L G+VTSDG   THVV GKVR
Sbjct: 1733 DQLSF---ELQEKGEGFRIMLMNIADDTKKAHLTKIIKDLGGSVTSDGSACTHVVTGKVR 1789

Query: 294  KTLNFFTAL---SWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKA 350
            KTLNF TAL   +WI+SPSWLKESF EGRFVDES ++L D  Y+ KYR+E+K  +LRAKA
Sbjct: 1790 KTLNFCTALCSGAWILSPSWLKESFHEGRFVDESAFILEDAEYLFKYRAEIKSVILRAKA 1849

Query: 351  RPGGLLK 357
            RP  LLK
Sbjct: 1850 RPRALLK 1856

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449529471|ref|XP_004171723.1| PREDICTED: uncharacterized LOC101209162 [Cucumis sativus]

 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 110/164 (67%), Gaps = 24/164 (14%)

Query: 1   DVLQIYSRELLSMNYA---GKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMY-KV 56
           DVLQ+Y REL +M YA   GK+S F EKCV NG                    C++  + 
Sbjct: 62  DVLQLYKRELPTMAYAANTGKQSTFMEKCVSNG------------------KYCTLLLES 103

Query: 57  VSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRT 116
            S +N G V+AA+ YQIVPADTQYAE+PLAAVS  YQHKG G +LY++LRKRLQSVGIRT
Sbjct: 104 KSEVNPGLVIAAITYQIVPADTQYAEIPLAAVSLAYQHKGFGHILYMELRKRLQSVGIRT 163

Query: 117 IFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKS 160
           IFCW DKES  F+ K  Q F S+AEVDT+G+  R+P+R   R++
Sbjct: 164 IFCWGDKESEGFWSK--QGFLSIAEVDTKGKVRRIPVRADIRRA 205

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449467739|ref|XP_004151580.1| PREDICTED: uncharacterized LOC101209162, partial [Cucumis sativus]

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 110/164 (67%), Gaps = 24/164 (14%)

Query: 1   DVLQIYSRELLSMNYA---GKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMY-KV 56
           DVLQ+Y REL +M YA   GK+S F EKCV NG                    C++  + 
Sbjct: 62  DVLQLYKRELPTMAYAANTGKQSTFMEKCVSNG------------------KYCTLLLES 103

Query: 57  VSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRT 116
            S +N G V+AA+ YQIVPADTQYAE+PLAAVS  YQHKG G +LY++LRKRLQSVGIRT
Sbjct: 104 KSEVNPGLVIAAITYQIVPADTQYAEIPLAAVSLAYQHKGFGHILYMELRKRLQSVGIRT 163

Query: 117 IFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKS 160
           IFCW DKES  F+ K  Q F S+AEVDT+G+  R+P+R   R++
Sbjct: 164 IFCWGDKESEGFWSK--QGFLSIAEVDTKGKVRRIPVRADIRRA 205

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|87241454|gb|ABD33312.1| GCN5-related N-acetyltransferase; BRCT [Medicago truncatula]

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 22/163 (13%)

Query: 1   DVLQIYSRELLSMNYA---GKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVV 57
           +VLQ+Y  EL  MNYA   GK+S F E+CV NG     L +  +                
Sbjct: 86  EVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSSLAG-------------- 131

Query: 58  SFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI 117
              + GKV+AA+ YQIVPADT+YAE+PLAAV++IYQ KG G++L+L+LRKRLQ+VGIR+I
Sbjct: 132 ---DSGKVLAAITYQIVPADTEYAEIPLAAVNAIYQRKGFGQILFLELRKRLQNVGIRSI 188

Query: 118 FCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKS 160
           FCW DKES  F+LK  Q F+S+A+VDT+GRA R P++   RK+
Sbjct: 189 FCWGDKESEGFWLK--QGFSSIAQVDTKGRARRFPVKADIRKA 229

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503415|ref|XP_003520505.1| PREDICTED: uncharacterized protein LOC100806087 [Glycine max]

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/163 (51%), Positives = 110/163 (67%), Gaps = 22/163 (13%)

Query: 1   DVLQIYSRELLSMNYA---GKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVV 57
           +VLQ+Y+ EL  MNYA   GK+S F E+CV NG      Y+  +             K  
Sbjct: 87  EVLQMYTTELPGMNYAANTGKQSKFLERCVTNG-----KYRTLL------------IKST 129

Query: 58  SFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI 117
           S  N GKV+AA+ YQI+PADT+YAE+PLAAV++IYQ KG G L++L+LRKRLQSVG+R+I
Sbjct: 130 SVGNSGKVIAAITYQIIPADTEYAEIPLAAVNAIYQRKGFGHLMFLELRKRLQSVGVRSI 189

Query: 118 FCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKS 160
            CW DKES  F+LK  Q F  +A+V T+GRA RLP++   +KS
Sbjct: 190 LCWGDKESEGFWLK--QGFVEIAQVGTKGRARRLPIKADIQKS 230

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
TAIR|locus:2060535	612	AT2G41450 [Arabidopsis thalian	0.323	0.189	0.573	1.4e-53
ZFIN|ZDB-GENE-041010-214	1122	paxip1 "PAX interacting (with	0.225	0.072	0.404	1e-06
UNIPROTKB|A0JNA8	984	PAXIP1 "PAX-interacting protei	0.236	0.086	0.373	4.1e-06
UNIPROTKB|G3MZP9	1195	PAXIP1 "PAX-interacting protei	0.236	0.071	0.373	5.1e-06
UNIPROTKB|Q6ZW49	1069	PAXIP1 "PAX-interacting protei	0.236	0.079	0.351	2.1e-05
RGD|1307547	994	Paxip1 "PAX interacting (with	0.236	0.085	0.351	2.4e-05
UNIPROTKB|F1P482	1062	PAXIP1 "Uncharacterized protei	0.256	0.086	0.336	2.6e-05
MGI|MGI:1890430	1056	Paxip1 "PAX interacting (with	0.236	0.080	0.351	5.6e-05

TAIR|locus:2060535 AT2G41450 [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query:   242 VSKEFQPNGKCFRITLMNIADDSKKVHLTKNLR---GAVTSDGITSTHVVAGKVRKTLNF 298
             +  E +PNG+ +RI LM+I D++K+  LT+ +R   G VT DG TSTH+V GKVRKTLN 
Sbjct:   402 IDMEARPNGQHYRILLMDICDENKRAWLTEVIRKLGGTVTLDGTTSTHIVTGKVRKTLNL 461

Query:   299 FTAL---SWIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGL 355
              TAL   +WIVSPSWLKES  EGRF +E+ ++L+D+ Y LKY ++LK  VLRAKARP  L
Sbjct:   462 CTALCSGAWIVSPSWLKESVREGRFANEASHILHDEDYQLKYDTDLKSTVLRAKARPNSL 521

Query:   356 LK 357
             LK
Sbjct:   522 LK 523

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008080 "N-acetyltransferase activity" evidence=IEA;ISS

ZFIN|ZDB-GENE-041010-214 paxip1 "PAX interacting (with transcription-activation domain) protein 1" [Danio rerio (taxid:7955)]

 Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 34/84 (40%), Positives = 49/84 (58%)

Query:   272 NLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYML 328
             +L G V       TH+VA KV +T+ F TA+S    IV+P WL+ES+   +FVDE  YML
Sbjct:   941 DLGGEVADSTQKCTHLVANKVTRTVKFLTAISVVKHIVTPEWLEESWKSQKFVDEQSYML 1000

Query:   329 NDDGYVLKYRSELKDAVLRAKARP 352
              D    + +   L++++ RA A P
Sbjct:  1001 RDAEAEVLFSFSLEESLKRAHAAP 1024

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

UNIPROTKB|A0JNA8 PAXIP1 "PAX-interacting protein 1" [Bos taurus (taxid:9913)]

 Score = 140 (54.3 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 34/91 (37%), Positives = 52/91 (57%)

Query:   265 KKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV 321
             KK+++   L G V       TH++A KV +T+ F TA+S    IV+P WL+E F   +FV
Sbjct:   799 KKLYI---LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFV 855

Query:   322 DESFYMLNDDGYVLKYRSELKDAVLRAKARP 352
             DE  Y+L D    + +   L++++ RA A P
Sbjct:   856 DEQNYLLRDAEAEVLFSFSLEESLRRAHASP 886

GO:0016363 "nuclear matrix" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

UNIPROTKB|G3MZP9 PAXIP1 "PAX-interacting protein 1" [Bos taurus (taxid:9913)]

 Score = 140 (54.3 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 34/91 (37%), Positives = 52/91 (57%)

Query:   265 KKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV 321
             KK+++   L G V       TH++A KV +T+ F TA+S    IV+P WL+E F   +FV
Sbjct:  1010 KKLYI---LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFKCQKFV 1066

Query:   322 DESFYMLNDDGYVLKYRSELKDAVLRAKARP 352
             DE  Y+L D    + +   L++++ RA A P
Sbjct:  1067 DEQNYLLRDAEAEVLFSFSLEESLRRAHASP 1097

GO:0060717 "chorion development" evidence=IEA

GO:0060612 "adipose tissue development" evidence=IEA

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=IEA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IEA

GO:0051568 "histone H3-K4 methylation" evidence=IEA

GO:0045830 "positive regulation of isotype switching" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0035097 "histone methyltransferase complex" evidence=IEA

GO:0035066 "positive regulation of histone acetylation" evidence=IEA

GO:0031398 "positive regulation of protein ubiquitination" evidence=IEA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=IEA

UNIPROTKB|Q6ZW49 PAXIP1 "PAX-interacting protein 1" [Homo sapiens (taxid:9606)]

 Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 32/91 (35%), Positives = 51/91 (56%)

Query:   265 KKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV 321
             KK+++   L G V       TH++A KV +T+ F TA+S    IV+P WL+E F   +F+
Sbjct:   884 KKLYI---LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFI 940

Query:   322 DESFYMLNDDGYVLKYRSELKDAVLRAKARP 352
             DE  Y+L D    + +   L++++ RA   P
Sbjct:   941 DEQNYILRDAEAEVLFSFSLEESLKRAHVSP 971

GO:0006281 "DNA repair" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0060612 "adipose tissue development" evidence=IEA

GO:0060717 "chorion development" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IDA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=ISS

GO:0031398 "positive regulation of protein ubiquitination" evidence=ISS

GO:0035066 "positive regulation of histone acetylation" evidence=ISS

GO:0045830 "positive regulation of isotype switching" evidence=ISS

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISS

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=ISS;IMP

GO:0035097 "histone methyltransferase complex" evidence=IDA

GO:0051568 "histone H3-K4 methylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

RGD|1307547 Paxip1 "PAX interacting (with transcription-activation domain) protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 32/91 (35%), Positives = 50/91 (54%)

Query:   265 KKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV 321
             KK+++   L G V       TH++A KV +T+ F TA+S    IV+P WL+E F    F+
Sbjct:   809 KKLYI---LGGEVAESTKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQMFI 865

Query:   322 DESFYMLNDDGYVLKYRSELKDAVLRAKARP 352
             DE  Y+L D    + +   L++++ RA   P
Sbjct:   866 DEQNYILRDAEAEVLFSFSLEESLKRAHVSP 896

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=ISO

GO:0001570 "vasculogenesis" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0006974 "response to DNA damage stimulus" evidence=ISO

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=ISO

GO:0031398 "positive regulation of protein ubiquitination" evidence=ISO

GO:0035066 "positive regulation of histone acetylation" evidence=ISO

GO:0035097 "histone methyltransferase complex" evidence=ISO

GO:0043542 "endothelial cell migration" evidence=ISO

GO:0045830 "positive regulation of isotype switching" evidence=ISO

GO:0051568 "histone H3-K4 methylation" evidence=ISO

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISO

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=ISO

GO:0060612 "adipose tissue development" evidence=ISO

GO:0060717 "chorion development" evidence=ISO

UNIPROTKB|F1P482 PAXIP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 33/98 (33%), Positives = 54/98 (55%)

Query:   258 MNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKES 314
             M +    KK+++   L G V       TH++A KV +T+ F TA+S    IV+P WL+E 
Sbjct:   886 MQVQQYIKKLYI---LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEEC 942

Query:   315 FGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARP 352
             F   +FVDE  ++L D    + +   L++++ RA+  P
Sbjct:   943 FKCQKFVDEQNFVLRDAEAEVLFCFSLEESLKRAQVAP 980

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0031398 "positive regulation of protein ubiquitination" evidence=IEA

GO:0035066 "positive regulation of histone acetylation" evidence=IEA

GO:0035097 "histone methyltransferase complex" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0045830 "positive regulation of isotype switching" evidence=IEA

GO:0051568 "histone H3-K4 methylation" evidence=IEA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IEA

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=IEA

GO:0060612 "adipose tissue development" evidence=IEA

GO:0060717 "chorion development" evidence=IEA

MGI|MGI:1890430 Paxip1 "PAX interacting (with transcription-activation domain) protein 1" [Mus musculus (taxid:10090)]

 Score = 130 (50.8 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 32/91 (35%), Positives = 50/91 (54%)

Query:   265 KKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV 321
             KK+++   L G V       TH++A KV +T+ F TA+S    IV+P WL+E F    F+
Sbjct:   871 KKLYI---LGGEVAECTKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQTFI 927

Query:   322 DESFYMLNDDGYVLKYRSELKDAVLRAKARP 352
             DE  Y+L D    + +   L++++ RA   P
Sbjct:   928 DEQNYILRDAEAEVLFSFSLEESLKRAHVSP 958


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      359       348   0.00099  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  222 KB (2123 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.45u 0.10s 25.55t   Elapsed:  00:00:01
  Total cpu time:  25.45u 0.10s 25.55t   Elapsed:  00:00:01
  Start:  Mon May 20 21:25:44 2013   End:  Mon May 20 21:25:45 2013

GO:0000416 "positive regulation of histone H3-K36 methylation" evidence=IMP

GO:0001570 "vasculogenesis" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0006281 "DNA repair" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0030330 "DNA damage response, signal transduction by p53 class mediator" evidence=ISO

GO:0031398 "positive regulation of protein ubiquitination" evidence=IMP

GO:0035066 "positive regulation of histone acetylation" evidence=IMP

GO:0035097 "histone methyltransferase complex" evidence=ISO;IDA

GO:0043542 "endothelial cell migration" evidence=IMP

GO:0045830 "positive regulation of isotype switching" evidence=IMP

GO:0051568 "histone H3-K4 methylation" evidence=ISO

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IMP

GO:0060261 "positive regulation of transcription initiation from RNA polymerase II promoter" evidence=ISO;IMP

GO:0060612 "adipose tissue development" evidence=IMP

GO:0060717 "chorion development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	359
cd04301	65	cd04301, NAT_SF, N-Acyltransferase superfamily: Va	5e-04
TIGR01575	131	TIGR01575, rimI, ribosomal-protein-alanine acetylt	0.002
cd00027	72	cd00027, BRCT, Breast Cancer Suppressor Protein (B	0.002
pfam00583	80	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT	0.003

>gnl|CDD|173926 cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 11/58 (18%), Positives = 21/58 (36%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW 120
           G++V         +    A +   AV   Y+ KG+G  L     +  +  G + +   
Sbjct: 8   GEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRLE 65

NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included. Length = 65

>gnl|CDD|233477 TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIF 118
           GKVV     QIV  +   A +   AV   YQ +G+GR L  +L    +  G+  IF
Sbjct: 40  GKVVGYAGVQIVLDE---AHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIF 92

Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database [Protein synthesis, Ribosomal proteins: synthesis and modification]. Length = 131

>gnl|CDD|237994 cd00027, BRCT, Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 269 LTKNLRGAVTSDG-ITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESF 315
           L + L G VTS     +THV+ G          A+     IV+P WL +  
Sbjct: 21  LIEKLGGKVTSSVSKKTTHVIVGSDAGPKKLLKAIKLGIPIVTPEWLLDCL 71

The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks. Length = 72

>gnl|CDD|216007 pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 15/58 (25%), Positives = 27/58 (46%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW 120
           G++V      I+  +   AE+   AV   Y+ KG+G  L   L +  + +G++ I   
Sbjct: 5   GELVGFASLSIIDEEGNVAEIEGLAVDPEYRGKGIGTALLEALEEYARELGLKRIELE 62

This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 80

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
KOG2043	896	consensus Signaling protein SWIFT and related BRCT	99.74
PF00583	83	Acetyltransf_1: Acetyltransferase (GNAT) family; I	99.46
PRK10314	153	putative acyltransferase; Provisional	99.37
PF13508	79	Acetyltransf_7: Acetyltransferase (GNAT) domain; P	99.35
COG1246	153	ArgA N-acetylglutamate synthase and related acetyl	99.33
PTZ00330	147	acetyltransferase; Provisional	99.27
PLN02706	150	glucosamine 6-phosphate N-acetyltransferase	99.23
PF13673	117	Acetyltransf_10: Acetyltransferase (GNAT) domain;	99.22
PRK10146	144	aminoalkylphosphonic acid N-acetyltransferase; Pro	99.22
PRK07922	169	N-acetylglutamate synthase; Validated	99.16
cd02169	297	Citrate_lyase_ligase Citrate lyase ligase. Citrate	99.14
TIGR02382	191	wecD_rffC TDP-D-fucosamine acetyltransferase. This	99.11
PRK07757	152	acetyltransferase; Provisional	99.11
PRK03624	140	putative acetyltransferase; Provisional	99.11
PHA00673	154	acetyltransferase domain containing protein	99.07
PF13527	127	Acetyltransf_9: Acetyltransferase (GNAT) domain; P	99.04
TIGR02406	157	ectoine_EctA L-2,4-diaminobutyric acid acetyltrans	99.03
TIGR01575	131	rimI ribosomal-protein-alanine acetyltransferase.	99.02
PRK10975	194	TDP-fucosamine acetyltransferase; Provisional	99.02
PF13420	155	Acetyltransf_4: Acetyltransferase (GNAT) domain; P	98.99
PLN02825	515	amino-acid N-acetyltransferase	98.99
COG0456	177	RimI Acetyltransferases [General function predicti	98.98
PRK05279	441	N-acetylglutamate synthase; Validated	98.95
TIGR01890	429	N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi	98.95
PRK09491	146	rimI ribosomal-protein-alanine N-acetyltransferase	98.94
TIGR00124	332	cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP	98.94
PRK13688	156	hypothetical protein; Provisional	98.93
TIGR03827	266	GNAT_ablB putative beta-lysine N-acetyltransferase	98.93
PRK10140	162	putative acetyltransferase YhhY; Provisional	98.91
TIGR03448	292	mycothiol_MshD mycothiol biosynthesis acetyltransf	98.88
PRK12308	614	bifunctional argininosuccinate lyase/N-acetylgluta	98.87
PF00533	78	BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IP	98.86
PRK09831	147	putative acyltransferase; Provisional	98.84
KOG3139	165	consensus N-acetyltransferase [General function pr	98.77
cd00027	72	BRCT Breast Cancer Suppressor Protein (BRCA1), car	98.74
TIGR03103	547	trio_acet_GNAT GNAT-family acetyltransferase TIGR0	98.72
PRK15130	186	spermidine N1-acetyltransferase; Provisional	98.67
cd04301	65	NAT_SF N-Acyltransferase superfamily: Various enzy	98.67
COG3153	171	Predicted acetyltransferase [General function pred	98.67
smart00292	80	BRCT breast cancer carboxy-terminal domain.	98.64
PRK10514	145	putative acetyltransferase; Provisional	98.62
KOG4362	684	consensus Transcriptional regulator BRCA1 [Replica	98.61
TIGR03448	292	mycothiol_MshD mycothiol biosynthesis acetyltransf	98.6
PF08445	86	FR47: FR47-like protein; InterPro: IPR013653 Prote	98.6
PRK10151	179	ribosomal-protein-L7/L12-serine acetyltransferase;	98.59
PHA01807	153	hypothetical protein	98.59
PF13523	152	Acetyltransf_8: Acetyltransferase (GNAT) domain; P	98.58
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.58
TIGR01211	522	ELP3 histone acetyltransferase, ELP3 family. The S	98.57
PF13302	142	Acetyltransf_3: Acetyltransferase (GNAT) domain; P	98.54
PRK10809	194	ribosomal-protein-S5-alanine N-acetyltransferase;	98.52
PF12738	63	PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2W	98.51
TIGR03585	156	PseH pseudaminic acid biosynthesis N-acetyl transf	98.5
PRK01346	411	hypothetical protein; Provisional	98.49
PRK10562	145	putative acetyltransferase; Provisional	98.48
KOG3216	163	consensus Diamine acetyltransferase [Amino acid tr	98.47
KOG3396	150	consensus Glucosamine-phosphate N-acetyltransferas	98.44
COG2153	155	ElaA Predicted acyltransferase [General function p	98.41
KOG3397	225	consensus Acetyltransferases [General function pre	98.28
COG3393	268	Predicted acetyltransferase [General function pred	98.12
KOG2488	202	consensus Acetyltransferase (GNAT) domain-containi	98.11
COG1247	169	Sortase and related acyltransferases [Cell envelop	98.02
PF14542	78	Acetyltransf_CG: GCN5-related N-acetyl-transferase	97.97
COG3053	352	CitC Citrate lyase synthetase [Energy production a	97.95
COG1670	187	RimL Acetyltransferases, including N-acetylases of	97.9
COG0454	156	WecD Histone acetyltransferase HPA2 and related ac	97.81
PF13718	196	GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z	97.79
KOG3138	187	consensus Predicted N-acetyltransferase [General f	97.78
KOG3226	508	consensus DNA repair protein [Replication, recombi	97.74
COG2388	99	Predicted acetyltransferase [General function pred	97.49
PLN03123	981	poly [ADP-ribose] polymerase; Provisional	97.21
KOG3234	173	consensus Acetyltransferase, (GNAT) family [Genera	97.18
PLN03122	815	Poly [ADP-ribose] polymerase; Provisional	97.17
PF12568	128	DUF3749: Acetyltransferase (GNAT) domain; InterPro	97.05
KOG3235	193	consensus Subunit of the major N alpha-acetyltrans	97.05
COG1444	758	Predicted P-loop ATPase fused to an acetyltransfer	96.98
COG3818	167	Predicted acetyltransferase, GNAT superfamily [Gen	96.69
KOG4144	190	consensus Arylalkylamine N-acetyltransferase [Gene	96.33
PF06852	181	DUF1248: Protein of unknown function (DUF1248); In	96.08
COG3981	174	Predicted acetyltransferase [General function pred	96.07
PF12746	265	GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S	95.66
KOG3548	1176	consensus DNA damage checkpoint protein RHP9/CRB2/	95.47
COG1243	515	ELP3 Histone acetyltransferase [Transcription / Ch	95.41
PF08444	89	Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt	95.33
COG5628	143	Predicted acetyltransferase [General function pred	95.21
KOG1929	811	consensus Nucleotide excision repair factor NEF2,	95.18
COG4552	389	Eis Predicted acetyltransferase involved in intrac	95.14
TIGR03694	241	exosort_acyl putative PEP-CTERM/exosortase system-	94.81
PF13480	142	Acetyltransf_6: Acetyltransferase (GNAT) domain	94.55
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	94.33
KOG4135	185	consensus Predicted phosphoglucosamine acetyltrans	93.9
cd04264	99	DUF619-NAGS DUF619 domain of various N-acetylgluta	93.48
PRK13834	207	putative autoinducer synthesis protein; Provisiona	93.25
PF00765	182	Autoind_synth: Autoinducer synthetase; InterPro: I	92.94
KOG0966	881	consensus ATP-dependent DNA ligase IV [Replication	92.85
KOG1929	811	consensus Nucleotide excision repair factor NEF2,	92.79
PF04377	128	ATE_C: Arginine-tRNA-protein transferase, C termin	92.6
KOG2481	570	consensus Protein required for normal rRNA process	92.01
KOG2535	554	consensus RNA polymerase II elongator complex, sub	91.72
KOG1472	720	consensus Histone acetyltransferase SAGA/ADA, cata	91.41
PF01233	162	NMT: Myristoyl-CoA:protein N-myristoyltransferase,	89.73
cd04265	99	DUF619-NAGS-U DUF619 domain of various N-acetylglu	89.25
KOG3524	850	consensus Predicted guanine nucleotide exchange fa	89.24
PF05301	120	Mec-17: Touch receptor neuron protein Mec-17; Inte	89.12
PF13880	70	Acetyltransf_13: ESCO1/2 acetyl-transferase	88.61
COG3375	266	Uncharacterized conserved protein [Function unknow	88.29
KOG3524	850	consensus Predicted guanine nucleotide exchange fa	88.22
COG5163	591	NOP7 Protein required for biogenesis of the 60S ri	87.78
TIGR03827	266	GNAT_ablB putative beta-lysine N-acetyltransferase	87.21
KOG0966	881	consensus ATP-dependent DNA ligase IV [Replication	86.85
PRK01305	240	arginyl-tRNA-protein transferase; Provisional	84.05

>KOG2043 consensus Signaling protein SWIFT and related BRCT domain proteins [Transcription; Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]

Probab=99.74  E-value=1.8e-18  Score=187.95  Aligned_cols=291  Identities=22%  Similarity=0.259  Sum_probs=200.5

Q ss_pred             EEEEEEeeecC-CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEEeec
Q 048173           65 VVAAVIYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVD  143 (359)
Q Consensus        65 IVgvi~l~i~~-~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~  143 (359)
                      .-+.+++...+ .+..+......++..+-+-+|.++..........+..+.+-+..+.....+.||.+.  |+....+.+
T Consensus       343 ~~~~it~~~~~~~~~~~~~~~i~~~~~~~~~~~~ss~~~~~~qs~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~s~~~  420 (896)
T KOG2043|consen  343 NMAAITLQNFPDDQTQGNAQPIENIPSDPPQKKYSSMVTYSPQSPNEKKDSRMVQPFPIPENVNSLLKL--DGIKFSEFD  420 (896)
T ss_pred             cccccccccccccCcCcCccccccccCCcccccccCcceeccccccccCCccccccCCccccccccccc--ccccccccC
Confidence            67788888888 455788889999998888899999999998888888999999999999999999999  999888877


Q ss_pred             ccCcc--------cCcchhh---hhhhcCCCC-cEEEecccccc----------------cccC------CCCC--C---
Q 048173          144 TEGRA--------GRLPLRQ---KFRKSTEPE-RVVIDGCSREG----------------AKLG------GFPP--S---  184 (359)
Q Consensus       144 ~~g~~--------~~~~~~~---~m~K~l~~~-~~m~~~l~~~~----------------~~~~------~~~~--~---  184 (359)
                      ..++.        ....++-   ++...+.+. ++|-+|...+.                ++..      ..|.  .   
T Consensus       421 ~e~~~~~d~~~~~~~~~iks~~~e~e~s~~~~s~~~~~hv~~~~~s~tq~~~s~~~~~~~~~~~~~~~i~~~~~~~~~~~  500 (896)
T KOG2043|consen  421 PESPEKLDKLRKASEEVIKSNSGELENSFDSKSELFGKHVIDEHGSNTQMEDSVSDQKRESEVFNDVKITSYPAPPKQNN  500 (896)
T ss_pred             CCcccccchhhhcccccccccchhhhhcccCCccccccccccCCCCccccccchhhhhhhccccccccccccCCCccccc
Confidence            76622        2222222   233333344 66666665544                0110      0000  0   


Q ss_pred             -----CCcccC--------------CCC-cchhhhhcccc-------------ccccccccccccCcccccCcCCccccC
Q 048173          185 -----LDTVHD--------------SGD-LATFEKVHCSN-------------MTVGAAQIGADTGAKHCSFSQGQRRED  231 (359)
Q Consensus       185 -----~~~~~~--------------~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~s~ss~~~kr~~  231 (359)
                           ...+.|              |.. ...-++.-|++             ..+...+.+....+.+|.++..+|+..
T Consensus       501 ~~~~~~~~~id~k~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~d~~t~~~~~~~~~~~~~s~~~~~s~~~~  580 (896)
T KOG2043|consen  501 ERQPVKGDDIDLKGEESSTESVRQLLAKSKREKLTSKSNRKEKETIASQIEADVVTPESQWGLSTKNLASSSDETSKDER  580 (896)
T ss_pred             cccccccccccccccCCCCcchhhhhccCcccccccccccccccccchhhhhcccCcccccCcccccccccccccchhhh
Confidence                 000000              000 00000001111             112335556666777777776554430


Q ss_pred             C--------------------CCccccc-----------c-------------------eeec----ccC--CCCCc--e
Q 048173          232 R--------------------PVSITSV-----------V-------------------FVSK----EFQ--PNGKC--F  253 (359)
Q Consensus       232 ~--------------------~~~i~k~-----------~-------------------~i~~----~~~--~~~~~--p  253 (359)
                      .                    +..+.+.           .                   ++..    +..  .....  +
T Consensus       581 ~~~~~~~~~n~~~~~qi~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~t~~~~e~~s~~~~~~e~~~~r~  660 (896)
T KOG2043|consen  581 KNFKRLTRSNSDNDAQLNVSSKSSKPKTSQSSSQGESCPDVPTICVRTNYSGASRLASTPAASELRSSSANLNELASKRI  660 (896)
T ss_pred             ccccccccccccchhhhhccccccCcccccccccCCCCCCcccccccccccccchhccccchhhhhhhhhccchhhccce
Confidence            0                    0011111           0                   1111    111  11111  5


Q ss_pred             EEEEcccCcchHHHHHHHhcCcEEecCCCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCCCcceecC
Q 048173          254 RITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLND  330 (359)
Q Consensus       254 rI~fSgl~~e~kk~klik~LGG~V~~d~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L~D  330 (359)
                      .++|++..+.....+.++.|||.++.+..++||+|+.+++||.|||+||+   |||+++||.+|.+.|.|+||++|+|.|
T Consensus       661 ~~lfs~~~~~~~~k~~~k~lg~s~~ss~~e~Th~i~~rirRT~k~Leai~~G~~ivT~~wL~s~~k~g~~~dek~yil~D  740 (896)
T KOG2043|consen  661 EVLFSDKNDGKNYKLAKKFLGGSVASSDSEATHFIADRIRRTLKFLEAISSGKPLVTPQWLVSSLKSGEKLDEKPYILHD  740 (896)
T ss_pred             eeeeeeccCchhhhhHHhhccceeecccccceeeeehhhhccHHHHhhhccCCcccchHHHHHHhhccccccCccccccC
Confidence            68899998866566778899999999999999999999999999999999   999999999999999999999999999


Q ss_pred             cccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173          331 DGYVLKYRSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       331 ~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                      +|.|++|+|+|.++|.||+++|  ||.||
T Consensus       741 ~ekEk~~gf~l~ssl~RAr~~p--lL~g~  767 (896)
T KOG2043|consen  741 EEKEKEFGFRLKSSLLRARADP--LLEGI  767 (896)
T ss_pred             HHHHhccCcchhhHHHHhhcch--hhcCc
Confidence            9999999999999999999987  99997

>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2

Probab=99.46  E-value=3.3e-13  Score=102.95  Aligned_cols=76  Identities=21%  Similarity=0.275  Sum_probs=70.6

Q ss_pred             CCCCcEEEEEEeeecCCC---CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcc
Q 048173           60 LNLGKVVAAVIYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQV  133 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d---~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~  133 (359)
                      .++|+|||++.+...+.+   ...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+...   +..||+|+ 
T Consensus         2 ~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~-   80 (83)
T PF00583_consen    2 EEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKL-   80 (83)
T ss_dssp             EETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHT-
T ss_pred             cCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHc-
Confidence            478999999999998886   47899999999999999999999999999999999999999998885   77999999 


Q ss_pred             cCcE
Q 048173          134 QDFA  137 (359)
Q Consensus       134 ~GF~  137 (359)
                       ||+
T Consensus        81 -Gf~   83 (83)
T PF00583_consen   81 -GFE   83 (83)
T ss_dssp             -TEE
T ss_pred             -CCC
Confidence             996

3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....

>PRK10314 putative acyltransferase; Provisional

Probab=99.37  E-value=1.2e-12  Score=114.90  Aligned_cols=95  Identities=16%  Similarity=0.118  Sum_probs=79.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      ++|++||++++.....+...++|..+||+|+|||+|||+.|++++++.+++. |...+.+.+...+.+||+|.  ||+.+
T Consensus        55 ~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~--GF~~~  132 (153)
T PRK10314         55 KNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSF--GFIPV  132 (153)
T ss_pred             ECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHC--CCEEC
Confidence            6789999999765433334588999999999999999999999999999885 78899999988889999999  99999


Q ss_pred             EeecccCcccCcchhhhhhhcC
Q 048173          140 AEVDTEGRAGRLPLRQKFRKST  161 (359)
Q Consensus       140 ~e~~~~g~~~~~~~~~~m~K~l  161 (359)
                      ++.=.+..|.|..    |.|.+
T Consensus       133 g~~f~~~Gi~h~~----M~~~~  150 (153)
T PRK10314        133 TEVYEEDGIPHIG----MAREV  150 (153)
T ss_pred             CCccccCCCCcHh----hhhhh
Confidence            8764544588887    76643

>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A

Probab=99.35  E-value=2.9e-12  Score=99.00  Aligned_cols=71  Identities=23%  Similarity=0.358  Sum_probs=61.0

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      .++|+|||++.+   .++++.++|..++|+|+|||+|||+.|++.+.+.++   ...+++.++..+.+||+|+  ||+.
T Consensus         9 ~~~~~ivG~~~~---~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~---~~~i~l~~~~~~~~fY~~~--GF~~   79 (79)
T PF13508_consen    9 EDDGEIVGFIRL---WPNEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAK---SKKIFLFTNPAAIKFYEKL--GFEE   79 (79)
T ss_dssp             EETTEEEEEEEE---EETTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHT---CSEEEEEEEHHHHHHHHHT--TEEE
T ss_pred             EECCEEEEEEEE---EEcCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcC---CCcEEEEEcHHHHHHHHHC--cCCC
Confidence            479999999996   333458999999999999999999999999988884   4677888888999999999  9984

...

>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]

Probab=99.33  E-value=3.6e-12  Score=113.91  Aligned_cols=79  Identities=25%  Similarity=0.376  Sum_probs=70.2

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      ...+|+||||+.+|..++ ++.++|+.+||||+|||+|+|..|++.++..|+++||+++|+++. .+.+||+++  ||+.
T Consensus        45 ~E~~g~viGC~aL~~~~~-~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~~~~~F~~~--GF~~  120 (153)
T COG1246          45 IERDGKVIGCAALHPVLE-EDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-RSPEFFAER--GFTR  120 (153)
T ss_pred             eeeCCcEEEEEeecccCc-cCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-ccHHHHHHc--CCeE
Confidence            347999999999884333 356999999999999999999999999999999999999999996 569999999  9997


Q ss_pred             EEe
Q 048173          139 VAE  141 (359)
Q Consensus       139 ~~e  141 (359)
                      +..
T Consensus       121 vd~  123 (153)
T COG1246         121 VDK  123 (153)
T ss_pred             Ccc
Confidence            664

>PTZ00330 acetyltransferase; Provisional

Probab=99.27  E-value=2.1e-11  Score=102.45  Aligned_cols=79  Identities=18%  Similarity=0.238  Sum_probs=70.2

Q ss_pred             CCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G  135 (359)
                      .++|++||.+.+...+.    +..+++|..++|+|+|||+|||+.|++++++.+++.|+.++.+.++..|..||+|+  |
T Consensus        58 ~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~--G  135 (147)
T PTZ00330         58 SPTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKL--G  135 (147)
T ss_pred             eCCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHC--C
Confidence            36789999998876553    22367899999999999999999999999999999999999999998899999999  9


Q ss_pred             cEEEE
Q 048173          136 FASVA  140 (359)
Q Consensus       136 F~~~~  140 (359)
                      |+...
T Consensus       136 F~~~~  140 (147)
T PTZ00330        136 FRACE  140 (147)
T ss_pred             CEEec
Confidence            99765

>PLN02706 glucosamine 6-phosphate N-acetyltransferase

Probab=99.23  E-value=5.5e-11  Score=101.06  Aligned_cols=77  Identities=17%  Similarity=0.209  Sum_probs=67.6

Q ss_pred             CCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcE
Q 048173           62 LGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFA  137 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~  137 (359)
                      +|+|||.+.+.+.+.    ..++++|..++|+|+|||+|||+.|++++++.|++.|+++|.+.+.....+||+|+  ||+
T Consensus        63 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~--GF~  140 (150)
T PLN02706         63 SGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKC--GYV  140 (150)
T ss_pred             CCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHC--cCE
Confidence            689999988764431    23567888999999999999999999999999999999999999988888999999  999


Q ss_pred             EEE
Q 048173          138 SVA  140 (359)
Q Consensus       138 ~~~  140 (359)
                      ..+
T Consensus       141 ~~g  143 (150)
T PLN02706        141 RKE  143 (150)
T ss_pred             Eeh
Confidence            765

>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A

Probab=99.22  E-value=2.6e-11  Score=97.87  Aligned_cols=69  Identities=26%  Similarity=0.399  Sum_probs=59.5

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCc
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDF  136 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF  136 (359)
                      +.++|+|||.+.+.  + +   +.|.+++|+|+|||+|||++|++++++.|+. |++.+.+..+..|.+||+++  ||
T Consensus        49 ~~~~~~ivG~~~~~--~-~---~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~--GF  117 (117)
T PF13673_consen   49 AEEGGEIVGFAWLE--P-D---GEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKL--GF  117 (117)
T ss_dssp             EEETTEEEEEEEEE--T-C---EEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHT--T-
T ss_pred             EEECCEEEEEEEEc--C-C---CeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhC--CC
Confidence            44888999999975  2 2   3499999999999999999999999999988 99999999888899999999  98

>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional

Probab=99.22  E-value=2.8e-11  Score=101.29  Aligned_cols=79  Identities=15%  Similarity=0.135  Sum_probs=67.5

Q ss_pred             CCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173           60 LNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV  133 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~  133 (359)
                      .++|++||.+.+...+.   ...+++|..++|+|+|||+|+|+.|++++++.+++.|+..|.+.+..   .|..||+|+ 
T Consensus        53 ~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~-  131 (144)
T PRK10146         53 LLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLRE-  131 (144)
T ss_pred             EECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHc-
Confidence            46889999999876433   22357899999999999999999999999999999999999988764   599999999 


Q ss_pred             cCcEEEE
Q 048173          134 QDFASVA  140 (359)
Q Consensus       134 ~GF~~~~  140 (359)
                       ||+..+
T Consensus       132 -Gf~~~~  137 (144)
T PRK10146        132 -GYEQSH  137 (144)
T ss_pred             -CCchhh
Confidence             998553

>PRK07922 N-acetylglutamate synthase; Validated

Probab=99.16  E-value=1.4e-10  Score=103.10  Aligned_cols=77  Identities=21%  Similarity=0.324  Sum_probs=67.8

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.+...+.  ..++|..++|+|+|||+|||+.|++++++.+++.|++++++.+.  +..||+|+  ||..++
T Consensus        53 ~~~~iiG~~~~~~~~~--~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~--~~~fY~k~--GF~~~~  126 (169)
T PRK07922         53 LDGEVVGCGALHVMWE--DLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF--EVEFFARH--GFVEID  126 (169)
T ss_pred             cCCcEEEEEEEeecCC--CceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec--cHHHHHHC--CCEECc
Confidence            7889999988776554  45899999999999999999999999999999999999998876  48999999  999876


Q ss_pred             eec
Q 048173          141 EVD  143 (359)
Q Consensus       141 e~~  143 (359)
                      ...
T Consensus       127 ~~~  129 (169)
T PRK07922        127 GTP  129 (169)
T ss_pred             ccc
Confidence            533

>cd02169 Citrate_lyase_ligase Citrate lyase ligase

Probab=99.14  E-value=1.2e-10  Score=113.71  Aligned_cols=71  Identities=21%  Similarity=0.298  Sum_probs=65.9

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|+|||++.+..       .+|..+||+|+|||+|+|+.|++++++.+++.|+.++++.++..+.+||+|+  ||+.++
T Consensus        13 ~~~~iVG~~~l~~-------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~--GF~~~~   83 (297)
T cd02169          13 DAGELIATGSIAG-------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGL--GFKELA   83 (297)
T ss_pred             ECCEEEEEEEecc-------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHC--CCEEec
Confidence            6799999998631       3599999999999999999999999999999999999999998899999999  999888

Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.

>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase

Probab=99.11  E-value=3e-10  Score=101.90  Aligned_cols=77  Identities=14%  Similarity=0.099  Sum_probs=68.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+....+  ..++|..++|+|+|||+|+|+.|++++++.++++|+.+|.+.+..   .|..||+|+  ||+
T Consensus       106 ~~g~iiG~i~l~~~~~--~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~kl--GF~  181 (191)
T TIGR02382       106 ASGDPRGYVTLRELND--TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRS--GAN  181 (191)
T ss_pred             cCCeEEEEEEEEecCC--CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHc--CCc
Confidence            5789999999876554  348999999999999999999999999999999999999988655   499999999  999


Q ss_pred             EEEe
Q 048173          138 SVAE  141 (359)
Q Consensus       138 ~~~e  141 (359)
                      ..++
T Consensus       182 ~~~~  185 (191)
T TIGR02382       182 IEST  185 (191)
T ss_pred             cccc
Confidence            7765

This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).

>PRK07757 acetyltransferase; Provisional

Probab=99.11  E-value=3.4e-10  Score=96.44  Aligned_cols=78  Identities=26%  Similarity=0.404  Sum_probs=68.4

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.++..+.  ..++|..++|+|+|||+|+|+.|+.++++.+++.|+.++.+.+.  +..||+|+  ||+..+
T Consensus        48 ~~~~lvG~~~l~~~~~--~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~~~~Y~k~--GF~~~~  121 (152)
T PRK07757         48 EEGEIVGCCALHILWE--DLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--QPEFFEKL--GFREVD  121 (152)
T ss_pred             ECCEEEEEEEEEeccC--CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHC--CCEEcc
Confidence            5789999999876554  45889999999999999999999999999999999999987765  47899999  999987


Q ss_pred             eecc
Q 048173          141 EVDT  144 (359)
Q Consensus       141 e~~~  144 (359)
                      ..+.
T Consensus       122 ~~~~  125 (152)
T PRK07757        122 KEAL  125 (152)
T ss_pred             cccC
Confidence            6444

>PRK03624 putative acetyltransferase; Provisional

Probab=99.11  E-value=3e-10  Score=92.96  Aligned_cols=77  Identities=22%  Similarity=0.217  Sum_probs=65.3

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .++|++||.+.+..   +.+.+.|..++|+|+|||+|+|+.|+..+++.+++.|++.+.+.+..   .|..||+|+  ||
T Consensus        51 ~~~~~~vG~~~~~~---~~~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~--GF  125 (140)
T PRK03624         51 EVGGEVVGTVMGGY---DGHRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEAL--GY  125 (140)
T ss_pred             EcCCcEEEEEEeec---cCCCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHc--CC
Confidence            36789999987542   22346789999999999999999999999999999999999887765   489999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       126 ~~~~~  130 (140)
T PRK03624        126 EEQDR  130 (140)
T ss_pred             ccccE
Confidence            97664

>PHA00673 acetyltransferase domain containing protein

Probab=99.07  E-value=6.2e-10  Score=99.75  Aligned_cols=78  Identities=9%  Similarity=0.097  Sum_probs=71.4

Q ss_pred             CCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc--ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK--ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~--~A~~Fw~K~~~  134 (359)
                      ++|+|||.+.+.+.|.    +..+++|..+.|++++||+|||+.|++++++.|++.|...+++.+-.  .+..||.++  
T Consensus        62 ~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~--  139 (154)
T PHA00673         62 RGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAA--  139 (154)
T ss_pred             ECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhC--
Confidence            6889999999999886    44889999999999999999999999999999999999999998876  599999999  


Q ss_pred             CcEEEE
Q 048173          135 DFASVA  140 (359)
Q Consensus       135 GF~~~~  140 (359)
                      |++...
T Consensus       140 g~~~~~  145 (154)
T PHA00673        140 GYRETN  145 (154)
T ss_pred             Cchhhc
Confidence            998643

>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B

Probab=99.04  E-value=9.3e-10  Score=90.64  Aligned_cols=77  Identities=26%  Similarity=0.304  Sum_probs=63.5

Q ss_pred             cCCCCcEEEEEEeeecCC---CC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIVPA---DT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~---d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~  133 (359)
                      +.++|+|||.+.++....   +.  ..+.|..+||+|+|||+|+|+.|++++++++++.|+..+++++.  +.+||.|. 
T Consensus        46 ~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~~-  122 (127)
T PF13527_consen   46 AEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFPS--SPPFYRRF-  122 (127)
T ss_dssp             EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE-S--SHHHHHHT-
T ss_pred             EEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEecC--ChhhhhcC-
Confidence            447999999888755422   22  46999999999999999999999999999999999999999984  48999999 


Q ss_pred             cCcEEE
Q 048173          134 QDFASV  139 (359)
Q Consensus       134 ~GF~~~  139 (359)
                       ||+.+
T Consensus       123 -G~~~~  127 (127)
T PF13527_consen  123 -GFEYA  127 (127)
T ss_dssp             -TEEEE
T ss_pred             -CCEEC
Confidence             99863

...

>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase

Probab=99.03  E-value=1.2e-09  Score=95.53  Aligned_cols=76  Identities=21%  Similarity=0.120  Sum_probs=67.0

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+...+.+.+..+|..++|+|+|||+|+|+.|++.+++.+++.++.+|.+.+..   .|..||+|+  ||+
T Consensus        47 ~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~--G~~  124 (157)
T TIGR02406        47 EGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKAL--ARR  124 (157)
T ss_pred             CCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHh--Ccc
Confidence            567999988776666666778899999999999999999999999999999999999888755   488999999  997


Q ss_pred             E
Q 048173          138 S  138 (359)
Q Consensus       138 ~  138 (359)
                      .
T Consensus       125 ~  125 (157)
T TIGR02406       125 R  125 (157)
T ss_pred             c
Confidence            5

This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.

>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase

Probab=99.02  E-value=9.8e-10  Score=89.20  Aligned_cols=79  Identities=29%  Similarity=0.297  Sum_probs=67.1

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+....   +.++|..++|+|+|||+|+|+.|++++++.+++.|++++.+.+..   .|..||+|+  ||+
T Consensus        38 ~~~~~vg~~~~~~~~---~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~--Gf~  112 (131)
T TIGR01575        38 IGGKVVGYAGVQIVL---DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKL--GFN  112 (131)
T ss_pred             cCCeEEEEEEEEecC---CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHc--CCC
Confidence            688999999865433   236799999999999999999999999999999999999887554   478999999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      ..+....
T Consensus       113 ~~~~~~~  119 (131)
T TIGR01575       113 EIAIRRN  119 (131)
T ss_pred             ccccccc
Confidence            8876443

Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.

>PRK10975 TDP-fucosamine acetyltransferase; Provisional

Probab=99.02  E-value=2.1e-09  Score=96.34  Aligned_cols=77  Identities=16%  Similarity=0.141  Sum_probs=67.0

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+....+  ..++|..++|+|+|||+|+|+.|++.+++.+++.|+++|.+.+..   .|..||+|+  ||+
T Consensus       109 ~~g~~vG~~~l~~~~~--~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~--Gf~  184 (194)
T PRK10975        109 ASGQIQGFVTLRELND--TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRS--GAN  184 (194)
T ss_pred             CCCCEEEEEEEEecCC--CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHC--CCe
Confidence            5789999998765443  348899999999999999999999999999999999999887654   489999999  999


Q ss_pred             EEEe
Q 048173          138 SVAE  141 (359)
Q Consensus       138 ~~~e  141 (359)
                      ..+.
T Consensus       185 ~~~~  188 (194)
T PRK10975        185 IEST  188 (194)
T ss_pred             EeEE
Confidence            8775

>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A

Probab=98.99  E-value=3.1e-09  Score=90.16  Aligned_cols=83  Identities=25%  Similarity=0.307  Sum_probs=70.8

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....+....+++. +.|.++||++|+|+.|++.+++.| ++.|+++|.+.+..   .|..||+|+  ||
T Consensus        58 ~~g~iiG~~~~~~~~~~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~--GF  134 (155)
T PF13420_consen   58 EDGKIIGYVSLRDIDPYNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKL--GF  134 (155)
T ss_dssp             CTTEEEEEEEEEESSSGTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHT--TE
T ss_pred             cCCcEEEEEEEEeeeccCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhC--CC
Confidence            599999999988776666677666 777799999999999999999999 99999999876665   399999999  99


Q ss_pred             EEEEeecccC
Q 048173          137 ASVAEVDTEG  146 (359)
Q Consensus       137 ~~~~e~~~~g  146 (359)
                      +..++....+
T Consensus       135 ~~~g~~~~~~  144 (155)
T PF13420_consen  135 EEEGELKDHI  144 (155)
T ss_dssp             EEEEEEEEEE
T ss_pred             EEEEEEecEE
Confidence            9999765543

...

>PLN02825 amino-acid N-acetyltransferase

Probab=98.99  E-value=1.3e-09  Score=113.55  Aligned_cols=78  Identities=21%  Similarity=0.336  Sum_probs=68.6

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      ..+||+||||+.++..+ +...++|..+||+|+|||+|+|++|++++++.|++.|++++++.+. .+.+||+|+  ||+.
T Consensus       412 ~e~Dg~IVG~aal~~~~-~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt-~a~~fY~k~--GF~~  487 (515)
T PLN02825        412 VEREGSIIACAALFPFF-EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT-RTADWFVRR--GFSE  487 (515)
T ss_pred             EEECCEEEEEEEEEeec-CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC-cHHHHHHHC--CCEE
Confidence            34789999999876544 3356899999999999999999999999999999999999999884 679999999  9997


Q ss_pred             EE
Q 048173          139 VA  140 (359)
Q Consensus       139 ~~  140 (359)
                      .+
T Consensus       488 ~~  489 (515)
T PLN02825        488 CS  489 (515)
T ss_pred             eC
Confidence            65

>COG0456 RimI Acetyltransferases [General function prediction only]

Probab=98.98  E-value=2.6e-09  Score=92.14  Aligned_cols=79  Identities=23%  Similarity=0.288  Sum_probs=66.5

Q ss_pred             cEEEEEEeeecCCCC---ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC-cEEEEEeccc---cHHHHhhcccCc
Q 048173           64 KVVAAVIYQIVPADT---QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI-RTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        64 ~IVgvi~l~i~~~d~---~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI-~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      +++|.+.........   ..++|..+||+|+|||+|||+.|+.++++.+++.|+ ..+.|.++.+   |..||+|.  ||
T Consensus        72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~--GF  149 (177)
T COG0456          72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKL--GF  149 (177)
T ss_pred             ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHc--CC
Confidence            689988864222211   258899999999999999999999999999999997 8999998874   99999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      .+++....
T Consensus       150 ~~~~~~~~  157 (177)
T COG0456         150 EVVKIRKN  157 (177)
T ss_pred             EEEeeehh
Confidence            99886444

>PRK05279 N-acetylglutamate synthase; Validated

Probab=98.95  E-value=1.7e-09  Score=109.62  Aligned_cols=81  Identities=21%  Similarity=0.408  Sum_probs=69.0

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||++.+..... +..++|..++|+|+|||+|+|+.|++++++.+++.|+.++++.+ ..|.+||+|+  ||+..
T Consensus       340 ~~dg~iVG~~~~~~~~~-~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~-~~a~~fY~k~--GF~~~  415 (441)
T PRK05279        340 ERDGLIIGCAALYPFPE-EKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT-TRTAHWFLER--GFVPV  415 (441)
T ss_pred             EECCEEEEEEEEEEcCC-CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec-chHHHHHHHC--cCEEC
Confidence            46889999987654332 35689999999999999999999999999999999999998766 4689999999  99988


Q ss_pred             Eeecc
Q 048173          140 AEVDT  144 (359)
Q Consensus       140 ~e~~~  144 (359)
                      +....
T Consensus       416 g~~~~  420 (441)
T PRK05279        416 DVDDL  420 (441)
T ss_pred             ChhhC
Confidence            86443

>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase

Probab=98.95  E-value=2.4e-09  Score=108.46  Aligned_cols=78  Identities=21%  Similarity=0.380  Sum_probs=68.8

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||++.+...+ ++..++|..++|+|+|||+|+|+.|++++++.|++.|++++++++. .+.+||+|+  ||+..
T Consensus       328 ~~dg~iVG~~~~~~~~-~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~k~--GF~~~  403 (429)
T TIGR01890       328 EHDGNIIGCAALYPYA-EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFRER--GFQTA  403 (429)
T ss_pred             EECCEEEEEEEEEecC-CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHHHC--CCEEC
Confidence            3688999999876543 3467899999999999999999999999999999999999988765 578999999  99988


Q ss_pred             Ee
Q 048173          140 AE  141 (359)
Q Consensus       140 ~e  141 (359)
                      ++
T Consensus       404 g~  405 (429)
T TIGR01890       404 SV  405 (429)
T ss_pred             Ch
Confidence            75

This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.

>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional

Probab=98.94  E-value=4.6e-09  Score=89.07  Aligned_cols=76  Identities=26%  Similarity=0.291  Sum_probs=65.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+.....   .+.+..++|+|+|||+|+|+.+++.+++.+++.|++.+.+.+..   .|..||+|+  ||+
T Consensus        47 ~~~~~vG~~~~~~~~~---~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~--Gf~  121 (146)
T PRK09491         47 VNGQMAAFAITQVVLD---EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESL--GFN  121 (146)
T ss_pred             ECCeEEEEEEEEeecC---ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHc--CCE
Confidence            6789999988654332   25688999999999999999999999999999999999887644   499999999  999


Q ss_pred             EEEe
Q 048173          138 SVAE  141 (359)
Q Consensus       138 ~~~e  141 (359)
                      ..+.
T Consensus       122 ~~~~  125 (146)
T PRK09491        122 EVTI  125 (146)
T ss_pred             Eeee
Confidence            7775

>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase

Probab=98.94  E-value=2.7e-09  Score=105.74  Aligned_cols=74  Identities=15%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|+|||++.+.  +     ..|+.+||+|+|||+|+|+.|+.+|++.+++.|+.++++.+.....+||+++  ||..++
T Consensus        38 ~~~~lVg~g~l~--g-----~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~kl--GF~~i~  108 (332)
T TIGR00124        38 EDEEIIGCGGIA--G-----NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYC--GFKTLA  108 (332)
T ss_pred             ECCEEEEEEEEe--c-----CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHc--CCEEee
Confidence            788999999862  1     2499999999999999999999999999999999999999998889999999  999988


Q ss_pred             eec
Q 048173          141 EVD  143 (359)
Q Consensus       141 e~~  143 (359)
                      +++
T Consensus       109 ~~~  111 (332)
T TIGR00124       109 EAK  111 (332)
T ss_pred             eec
Confidence            754

ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.

>PRK13688 hypothetical protein; Provisional

Probab=98.93  E-value=4.1e-09  Score=93.81  Aligned_cols=76  Identities=24%  Similarity=0.211  Sum_probs=59.8

Q ss_pred             CCCCcEEEEEEeeecC--------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhh
Q 048173           60 LNLGKVVAAVIYQIVP--------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLK  131 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~--------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K  131 (359)
                      .+++++||++.+....        .+.++++|..++|+|+|||+|||++|++.+    ++.++. +.+.+...|..||+|
T Consensus        51 ~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a----~~~~~~-~~~~~~~~a~~FY~k  125 (156)
T PRK13688         51 YYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFA----KSFQLP-IKTIARNKSKDFWLK  125 (156)
T ss_pred             EECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHH----HHhCCe-EEEEeccchHHHHHh
Confidence            3788999988763321        234678999999999999999999999754    445664 556666679999999


Q ss_pred             cccCcEEEEee
Q 048173          132 QVQDFASVAEV  142 (359)
Q Consensus       132 ~~~GF~~~~e~  142 (359)
                      +  ||+..+..
T Consensus       126 ~--GF~~~~~~  134 (156)
T PRK13688        126 L--GFTPVEYK  134 (156)
T ss_pred             C--CCEEeEEe
Confidence            9  99998865

>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase

Probab=98.93  E-value=2.9e-09  Score=100.98  Aligned_cols=81  Identities=22%  Similarity=0.336  Sum_probs=70.0

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF~  137 (359)
                      ++|++||++.+.+.+. ...++|..++|+|+|||+|+|+.|++++++.+++.|++++++.++..   |..||+|+  ||.
T Consensus       165 ~~g~iVG~~~~~~~~~-~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~--GF~  241 (266)
T TIGR03827       165 DGGKIIALASAEMDPE-NGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARL--GYA  241 (266)
T ss_pred             ECCEEEEEEEEecCCC-CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHc--CCc
Confidence            6889999998755443 35689999999999999999999999999999999999999988764   67899999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      ..+....
T Consensus       242 ~~G~l~n  248 (266)
T TIGR03827       242 YGGTLVN  248 (266)
T ss_pred             cccEEee
Confidence            8886443

Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.

>PRK10140 putative acetyltransferase YhhY; Provisional

Probab=98.91  E-value=7e-09  Score=88.03  Aligned_cols=80  Identities=15%  Similarity=0.125  Sum_probs=65.0

Q ss_pred             CCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      ++|++||.+.+...+.  ....+++. ++|+|+|||+|+|+.|++.+.+.+++ .|+.++.+.+..   .|..||+|+  
T Consensus        58 ~~~~~vG~~~~~~~~~~~~~~~~~~~-~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~--  134 (162)
T PRK10140         58 IDGDVVGHLTIDVQQRPRRSHVADFG-ICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKY--  134 (162)
T ss_pred             ECCEEEEEEEEecccccccceEEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHC--
Confidence            5789999998875432  22334443 89999999999999999999999998 799999877753   589999999  


Q ss_pred             CcEEEEeec
Q 048173          135 DFASVAEVD  143 (359)
Q Consensus       135 GF~~~~e~~  143 (359)
                      ||+..+...
T Consensus       135 GF~~~g~~~  143 (162)
T PRK10140        135 GFEIEGTGK  143 (162)
T ss_pred             CCEEEeecc
Confidence            999888633

>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase

Probab=98.88  E-value=9e-09  Score=96.97  Aligned_cols=78  Identities=18%  Similarity=0.260  Sum_probs=65.9

Q ss_pred             CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEE
Q 048173           62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFAS  138 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~  138 (359)
                      +|++||.+.+...+.+...++|..++|+|+|||+|||+.|+.++++.+++.|+..|.+.+..   .|..||+|+  ||+.
T Consensus       208 ~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~--GF~~  285 (292)
T TIGR03448       208 PGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKL--GFTV  285 (292)
T ss_pred             CCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHc--CCEE
Confidence            68999986555444334567888899999999999999999999999999999999888755   489999999  9997


Q ss_pred             EEe
Q 048173          139 VAE  141 (359)
Q Consensus       139 ~~e  141 (359)
                      ...
T Consensus       286 ~~~  288 (292)
T TIGR03448       286 AEV  288 (292)
T ss_pred             ccc
Confidence            654

Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.

>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional

Probab=98.87  E-value=5.9e-09  Score=110.29  Aligned_cols=79  Identities=23%  Similarity=0.319  Sum_probs=68.1

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      +.++|+|||++.+.....  .+++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+.  +..||+|+  ||+.
T Consensus       508 a~~~g~IVG~~~l~~~~~--~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a~~FYek~--GF~~  581 (614)
T PRK12308        508 AEHHGEVTGCASLYIYDS--GLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--VPEFFMKQ--GFSP  581 (614)
T ss_pred             EEECCEEEEEEEEEEcCC--CeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--cHHHHHHC--CCEE
Confidence            347889999998765433  45889999999999999999999999999999999999998764  58999999  9998


Q ss_pred             EEeec
Q 048173          139 VAEVD  143 (359)
Q Consensus       139 ~~e~~  143 (359)
                      .+..+
T Consensus       582 ~~~~~  586 (614)
T PRK12308        582 TSKSL  586 (614)
T ss_pred             CCccc
Confidence            77543

>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1

Probab=98.86  E-value=7.6e-09  Score=78.63  Aligned_cols=65  Identities=25%  Similarity=0.489  Sum_probs=55.4

Q ss_pred             CceEEEEcccCcchH--HHHHHHhcCcEEecC-CCCeeEEEeCCC-CCcHHHHhhcc---cccCHHHHHHHH
Q 048173          251 KCFRITLMNIADDSK--KVHLTKNLRGAVTSD-GITSTHVVAGKV-RKTLNFFTALS---WIVSPSWLKESF  315 (359)
Q Consensus       251 ~~prI~fSgl~~e~k--k~klik~LGG~V~~d-~~~~THLVa~~~-~RT~KfL~AIa---wIVsp~WL~eS~  315 (359)
                      ++..|.++++....+  ..++++.+||.+..+ .+.+||||++.. .++.|+..+..   +||+|+||.+|+
T Consensus         7 ~g~~f~i~~~~~~~~~~l~~~i~~~GG~v~~~~~~~~thvI~~~~~~~~~k~~~~~~~~i~iV~~~Wi~~ci   78 (78)
T PF00533_consen    7 EGCTFCISGFDSDEREELEQLIKKHGGTVSNSFSKKTTHVIVGNPNKRTKKYKAAIANGIPIVSPDWIEDCI   78 (78)
T ss_dssp             TTEEEEESSTSSSHHHHHHHHHHHTTEEEESSSSTTSSEEEESSSHCCCHHHHHHHHTTSEEEETHHHHHHH
T ss_pred             CCEEEEEccCCCCCHHHHHHHHHHcCCEEEeecccCcEEEEeCCCCCccHHHHHHHHCCCeEecHHHHHHhC
Confidence            566788877766533  358899999999877 889999999988 89999999988   999999999995

The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....

>PRK09831 putative acyltransferase; Provisional

Probab=98.84  E-value=7e-09  Score=88.78  Aligned_cols=69  Identities=17%  Similarity=0.163  Sum_probs=58.4

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||.+.+..       .+|..++|+|+|||+|||+.|+.++++.+.+     +.+.++..|.+||+|+  ||+..
T Consensus        59 ~~~~~iiG~~~~~~-------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k~--Gf~~~  124 (147)
T PRK09831         59 VINAQPVGFITCIE-------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFERY--GFQTV  124 (147)
T ss_pred             EECCEEEEEEEehh-------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHHC--CCEEe
Confidence            47899999887531       4588999999999999999999999999887     3445566799999999  99998


Q ss_pred             Eee
Q 048173          140 AEV  142 (359)
Q Consensus       140 ~e~  142 (359)
                      ++.
T Consensus       125 g~~  127 (147)
T PRK09831        125 KQQ  127 (147)
T ss_pred             ecc
Confidence            873

>KOG3139 consensus N-acetyltransferase [General function prediction only]

Probab=98.77  E-value=3.5e-08  Score=89.13  Aligned_cols=75  Identities=19%  Similarity=0.261  Sum_probs=64.5

Q ss_pred             EEEEEEeeecCCC-CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEEEE
Q 048173           65 VVAAVIYQIVPAD-TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFASVA  140 (359)
Q Consensus        65 IVgvi~l~i~~~d-~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~~  140 (359)
                      -||++..-...+. ..++||-.+||+++|||+|||++|++++.+.+++.|...|++.+..   .|..+|+++  ||...+
T Consensus        68 ~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sL--GF~r~~  145 (165)
T KOG3139|consen   68 TVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESL--GFKRDK  145 (165)
T ss_pred             eEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhc--CceEec
Confidence            5888774333332 2579999999999999999999999999999999999999998877   499999999  999765


Q ss_pred             e
Q 048173          141 E  141 (359)
Q Consensus       141 e  141 (359)
                      .
T Consensus       146 r  146 (165)
T KOG3139|consen  146 R  146 (165)
T ss_pred             c
Confidence            4

>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain

Probab=98.74  E-value=3.7e-08  Score=71.46  Aligned_cols=64  Identities=25%  Similarity=0.428  Sum_probs=50.4

Q ss_pred             eEEEEcccC-cc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHh
Q 048173          253 FRITLMNIA-DD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFG  316 (359)
Q Consensus       253 prI~fSgl~-~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k  316 (359)
                      .+|.++|.. ..  ....++++.+||.+..+ ...+||||++......++..|+.   +||+++||.+|.+
T Consensus         2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~~~~~thvI~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~   72 (72)
T cd00027           2 LTFVITGDLPSEERDELKELIEKLGGKVTSSVSKKTTHVIVGSDAGPKKLLKAIKLGIPIVTPEWLLDCLK   72 (72)
T ss_pred             CEEEEEecCCCcCHHHHHHHHHHcCCEEeccccCCceEEEECCCCCchHHHHHHHcCCeEecHHHHHHHhC
Confidence            467888886 22  33357889999999988 55999999998776665666655   9999999999974

The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.

>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103

Probab=98.72  E-value=5e-08  Score=102.29  Aligned_cols=79  Identities=20%  Similarity=0.166  Sum_probs=65.8

Q ss_pred             CCCcEEEEEEeeecC---CC-CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173           61 NLGKVVAAVIYQIVP---AD-TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV  133 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~---~d-~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~  133 (359)
                      ++|+|||.+.+....   .+ +..++|..++|+|+|||+|||+.|+.++++.+++.|+.+|.+.+..   .|..||+|+ 
T Consensus       132 ~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~kl-  210 (547)
T TIGR03103       132 ASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKL-  210 (547)
T ss_pred             CCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHC-
Confidence            478999998753321   12 2347899999999999999999999999999999999999887764   489999999 


Q ss_pred             cCcEEEEe
Q 048173          134 QDFASVAE  141 (359)
Q Consensus       134 ~GF~~~~e  141 (359)
                       ||+.+..
T Consensus       211 -Gf~~~~~  217 (547)
T TIGR03103       211 -GFRRIPV  217 (547)
T ss_pred             -CCEEeeE
Confidence             9997653

Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.

>PRK15130 spermidine N1-acetyltransferase; Provisional

Probab=98.67  E-value=1.2e-07  Score=83.59  Aligned_cols=79  Identities=18%  Similarity=0.120  Sum_probs=65.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQ-SVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk-~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .+|++||.+.+....+....++| .++|+++|||+|+|+.++..+.+.+. ++|+++|++.+..   .|..||+|.  ||
T Consensus        64 ~~g~~iG~~~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~--GF  140 (186)
T PRK15130         64 CDGEKAGLVELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKL--GF  140 (186)
T ss_pred             ECCEEEEEEEEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHC--CC
Confidence            57899999987665544445666 49999999999999999999999886 5899999877544   599999999  99


Q ss_pred             EEEEee
Q 048173          137 ASVAEV  142 (359)
Q Consensus       137 ~~~~e~  142 (359)
                      +..+..
T Consensus       141 ~~~~~~  146 (186)
T PRK15130        141 EVEGEL  146 (186)
T ss_pred             EEEEEE
Confidence            988763

>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate

Probab=98.67  E-value=1.2e-07  Score=65.79  Aligned_cols=59  Identities=19%  Similarity=0.178  Sum_probs=53.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC  119 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l  119 (359)
                      +++++||.+.+...+.....++|..++|+++|||+|+|+.++.++.+.+++.|++++.+
T Consensus         6 ~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~   64 (65)
T cd04301           6 DDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL   64 (65)
T ss_pred             cCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence            56899999998777765677999999999999999999999999999999999999876

NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera

>COG3153 Predicted acetyltransferase [General function prediction only]

Probab=98.67  E-value=6.5e-08  Score=88.16  Aligned_cols=86  Identities=19%  Similarity=0.278  Sum_probs=71.5

Q ss_pred             ceeeccCCCCcEEEEEEeeecCCC---CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHh
Q 048173           54 YKVVSFLNLGKVVAAVIYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFL  130 (359)
Q Consensus        54 ~~~~~~~~~g~IVgvi~l~i~~~d---~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~  130 (359)
                      ..|-.+.++|+|||.|++.-..-+   ..---+.-+||+|+|||||||+.|+.+.++.|+..|...|+++++   .+||.
T Consensus        46 ~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGd---p~YY~  122 (171)
T COG3153          46 TLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGD---PTYYS  122 (171)
T ss_pred             ceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecC---ccccc
Confidence            344556688999999997665554   233447889999999999999999999999999999999999998   58999


Q ss_pred             hcccCcEEEEeecc
Q 048173          131 KQVQDFASVAEVDT  144 (359)
Q Consensus       131 K~~~GF~~~~e~~~  144 (359)
                      +.  ||+......-
T Consensus       123 rf--GF~~~~~~~l  134 (171)
T COG3153         123 RF--GFEPAAGAKL  134 (171)
T ss_pred             cc--CcEEcccccc
Confidence            99  9998776333

>smart00292 BRCT breast cancer carboxy-terminal domain

Probab=98.64  E-value=1.5e-07  Score=69.87  Aligned_cols=68  Identities=26%  Similarity=0.362  Sum_probs=50.8

Q ss_pred             CceEEEEcc-cCcc--hHHHHHHHhcCcEEecCCC--CeeEEEeCCCCCcHH-HHhhcc---cccCHHHHHHHHhCC
Q 048173          251 KCFRITLMN-IADD--SKKVHLTKNLRGAVTSDGI--TSTHVVAGKVRKTLN-FFTALS---WIVSPSWLKESFGEG  318 (359)
Q Consensus       251 ~~prI~fSg-l~~e--~kk~klik~LGG~V~~d~~--~~THLVa~~~~RT~K-fL~AIa---wIVsp~WL~eS~k~g  318 (359)
                      ++.+|.++| +...  ....++++.+||.+.....  .+||+|+....-... +..+..   +||+++||.+|.+.+
T Consensus         4 ~g~~~~~~g~~~~~~~~~l~~~i~~~Gg~~~~~~~~~~~thvi~~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~~~   80 (80)
T smart00292        4 KGKVFVITGKFDKNERDELKELIEALGGKVTSSLSSKTTTHVIVGSPEGGKLELLLAIALGIPIVTEDWLLDCLKAG   80 (80)
T ss_pred             CCeEEEEeCCCCCccHHHHHHHHHHcCCEEecccCccceeEEEEcCCCCccHHHHHHHHcCCCCccHHHHHHHHHCc
Confidence            456788888 4433  2335788999999998844  899999987654333 455554   999999999999864

>PRK10514 putative acetyltransferase; Provisional

Probab=98.62  E-value=8.9e-08  Score=80.58  Aligned_cols=70  Identities=16%  Similarity=0.153  Sum_probs=53.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.+.   +    .+|..++|+|+|||+|+|++|++.+++.++.  +.......+..|..||+|+  ||+..+
T Consensus        57 ~~~~~iG~~~~~---~----~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~~--i~~~v~~~N~~a~~~yek~--Gf~~~~  125 (145)
T PRK10514         57 ERDQPVGFMLLS---G----GHMEALFVDPDVRGCGVGRMLVEHALSLHPE--LTTDVNEQNEQAVGFYKKM--GFKVTG  125 (145)
T ss_pred             cCCcEEEEEEEe---c----CcEeEEEECHHhccCCHHHHHHHHHHHhccc--cEEEeecCCHHHHHHHHHC--CCEEec
Confidence            578999988752   1    3477899999999999999999999987543  2222222334599999999  999877


Q ss_pred             e
Q 048173          141 E  141 (359)
Q Consensus       141 e  141 (359)
                      .
T Consensus       126 ~  126 (145)
T PRK10514        126 R  126 (145)
T ss_pred             c
Confidence            5

>KOG4362 consensus Transcriptional regulator BRCA1 [Replication, recombination and repair; Transcription]

Probab=98.61  E-value=4.9e-08  Score=104.05  Aligned_cols=108  Identities=18%  Similarity=0.223  Sum_probs=75.2

Q ss_pred             cCCCCCceEEEEcccCcchHH--HHHHHhcCcEEecC-CCCeeEEEeC-----CCCCcHHHHhhcc---cccCHHHHHHH
Q 048173          246 FQPNGKCFRITLMNIADDSKK--VHLTKNLRGAVTSD-GITSTHVVAG-----KVRKTLNFFTALS---WIVSPSWLKES  314 (359)
Q Consensus       246 ~~~~~~~prI~fSgl~~e~kk--~klik~LGG~V~~d-~~~~THLVa~-----~~~RT~KfL~AIa---wIVsp~WL~eS  314 (359)
                      ....++..+.+.+|++|+.+.  .+....   ++... ++.+||+|+.     .+.||+|++.+|+   ||++.+|+.+|
T Consensus       472 ~~~~~kk~~~~~s~l~p~ek~~v~~~a~~---t~~k~~~~~~thvi~~~~~~g~c~rTlk~~~gil~gkwi~~~~w~~~s  548 (684)
T KOG4362|consen  472 THRFKKKLVLLVSGLTPSEKQLVEKFAVD---TISKFWIEPVTHVIASTDLEGACLRTLKVLMGILRGKWILSYDWVLAS  548 (684)
T ss_pred             ccCcccceeeeeccCCcchHHHHHHHHHH---HHhhccCCCceeeeeecccccchhhhHHHHHHhhcCceeeeHHHHHHH
Confidence            344556667778999996443  122211   22233 7889999995     5789999999999   99999999999


Q ss_pred             HhCCCCCCCCcceecCcccccccCCCHHHHHHHHHhCCCCCCCC
Q 048173          315 FGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKR  358 (359)
Q Consensus       315 ~k~g~flDEe~Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~G  358 (359)
                      ++.++|++|++|||.-+--...-+..... +.|-.++ .+||+|
T Consensus       549 ~k~~~~~~eepfEl~~d~~~~~~~~~~~~-~~a~s~~-~kLf~g  590 (684)
T KOG4362|consen  549 LKLRKWVSEEPFELQIDVPGAREGPKEKR-LRAESYK-PKLFEG  590 (684)
T ss_pred             HHhcCCCCCCCeeEeecccCcccCccccc-ccccccC-cchhcC
Confidence            99999999999999854332222222222 2333333 589998

>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase

Probab=98.60  E-value=1.1e-07  Score=89.51  Aligned_cols=74  Identities=12%  Similarity=0.166  Sum_probs=59.1

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .++|+|||.+.+.....+.  ++|..++|+|+|||+|||+.|++++++.+.    ..+.+++..   .|..||+++  ||
T Consensus        52 ~~~~~~vG~~~~~~~~~~~--~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~--Gf  123 (292)
T TIGR03448        52 VDSDPIVGYANLVPARGTD--PAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALASRL--GL  123 (292)
T ss_pred             EECCEEEEEEEEEcCCCCc--ceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHHHC--CC
Confidence            3678999999876654432  679999999999999999999999999865    344444443   489999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      ..+..
T Consensus       124 ~~~~~  128 (292)
T TIGR03448       124 VPTRE  128 (292)
T ss_pred             EEccE
Confidence            97764

Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.

>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT)

Probab=98.60  E-value=3.8e-07  Score=73.36  Aligned_cols=58  Identities=21%  Similarity=0.261  Sum_probs=48.7

Q ss_pred             eeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEEEEe
Q 048173           81 AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFASVAE  141 (359)
Q Consensus        81 a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~~e  141 (359)
                      ++|..+.++|+|||+|+|+.++.++.+.+.+.|..-. +....   .|..||+|.  ||+.+.+
T Consensus        22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~~-l~v~~~N~~s~~ly~kl--Gf~~~~~   82 (86)
T PF08445_consen   22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKTPF-LYVDADNEASIRLYEKL--GFREIEE   82 (86)
T ss_dssp             CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEEE-EEEETT-HHHHHHHHHC--T-EEEEE
T ss_pred             cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEE-EEEECCCHHHHHHHHHc--CCEEEEE
Confidence            7799999999999999999999999999999998654 44332   499999999  9998865

This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.

>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional

Probab=98.59  E-value=3.4e-07  Score=80.32  Aligned_cols=78  Identities=10%  Similarity=0.047  Sum_probs=66.0

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.++...++.+.++|.. .|+|+|||+|+|+.++.++.+.+.+ .|+++|.+.+..   .|..+++|+  ||
T Consensus        74 ~~~~~iG~~~l~~~~~~~~~~~ig~-~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~--Gf  150 (179)
T PRK10151         74 KEDELIGVLSFNRIEPLNKTAYIGY-WLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRN--GF  150 (179)
T ss_pred             ECCEEEEEEEEEeeccCCCceEEEE-EEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHC--CC
Confidence            4689999998776655556688876 6999999999999999999998875 689999877654   499999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       151 ~~~g~  155 (179)
T PRK10151        151 TLEGC  155 (179)
T ss_pred             EEEeE
Confidence            98876

>PHA01807 hypothetical protein

Probab=98.59  E-value=1.5e-07  Score=83.84  Aligned_cols=71  Identities=14%  Similarity=0.127  Sum_probs=58.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeE---EEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPL---AAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQ  132 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~---~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~  132 (359)
                      ++|++||.+.+.... +..+++|..   ++|+|+|||+|||+.|++++++.+++.|+..|.+.++..   |..||++-
T Consensus        60 ~dg~lvG~~~l~~~~-~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~  136 (153)
T PHA01807         60 RDGKLAGIAVLVFED-DPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV  136 (153)
T ss_pred             ECCEEEEEEEEEcCC-CcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence            688999998865444 333445443   799999999999999999999999999999998877774   88999875

>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A

Probab=98.58  E-value=3.2e-07  Score=78.31  Aligned_cols=85  Identities=16%  Similarity=0.168  Sum_probs=68.2

Q ss_pred             cCCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEeccc---cHHHHh
Q 048173           59 FLNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKE---SSFFFL  130 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~---A~~Fw~  130 (359)
                      +..||+++|.+.+.-..+    ++....|..++|+++|||+|+|+.++.++.+.+.+. ++.+|.+.+...   +...|+
T Consensus        53 ~~~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~  132 (152)
T PF13523_consen   53 AEDDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYE  132 (152)
T ss_dssp             EEETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHH
T ss_pred             EEECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHH
Confidence            458999999887643222    344556999999999999999999999999999987 899999988774   999999


Q ss_pred             hcccCcEEEEeeccc
Q 048173          131 KQVQDFASVAEVDTE  145 (359)
Q Consensus       131 K~~~GF~~~~e~~~~  145 (359)
                      |+  ||+.+++.+..
T Consensus       133 k~--GF~~~g~~~~~  145 (152)
T PF13523_consen  133 KA--GFRKVGEFEFP  145 (152)
T ss_dssp             HT--T-EEEEEEEES
T ss_pred             Hc--CCEEeeEEECC
Confidence            99  99999987653

>TIGR01686 FkbH FkbH-like domain

Probab=98.58  E-value=1.6e-07  Score=91.65  Aligned_cols=72  Identities=10%  Similarity=0.050  Sum_probs=62.2

Q ss_pred             CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec-----cccHHHHhhcccCc
Q 048173           62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD-----KESSFFFLKQVQDF  136 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~-----~~A~~Fw~K~~~GF  136 (359)
                      ++.+||.+.+...+   ...+|..++|++.+||+|||+.|+.++++.|++.|+.+|++...     ..|..||+|+  ||
T Consensus       242 d~givG~~~~~~~~---~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~--GF  316 (320)
T TIGR01686       242 DSGIIGIFVFEKKE---GNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQI--GF  316 (320)
T ss_pred             CCceEEEEEEEecC---CcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHc--CC
Confidence            66799998865432   34789999999999999999999999999999999999988653     3599999999  99


Q ss_pred             EE
Q 048173          137 AS  138 (359)
Q Consensus       137 ~~  138 (359)
                      +.
T Consensus       317 ~~  318 (320)
T TIGR01686       317 ED  318 (320)
T ss_pred             cc
Confidence            84

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01211 ELP3 histone acetyltransferase, ELP3 family

Probab=98.57  E-value=1.8e-07  Score=98.00  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=69.0

Q ss_pred             CCCcEEEEEEeeecCCC------CceeeeeEEEe-----------ccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc
Q 048173           61 NLGKVVAAVIYQIVPAD------TQYAEVPLAAV-----------SSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK  123 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d------~~~a~I~~~AV-----------~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~  123 (359)
                      +++.+||-+.+.....+      ..-|.|+.+.|           +++|||+|+|+.|++++++.|++.|+++|.+.++.
T Consensus       421 ~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~  500 (522)
T TIGR01211       421 KNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGI  500 (522)
T ss_pred             CCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCc
Confidence            45789999998776542      23588999985           49999999999999999999999999999999998


Q ss_pred             ccHHHHhhcccCcEEEEe
Q 048173          124 ESSFFFLKQVQDFASVAE  141 (359)
Q Consensus       124 ~A~~Fw~K~~~GF~~~~e  141 (359)
                      .|..||+|+  ||...++
T Consensus       501 ~A~~FY~kl--Gf~~~g~  516 (522)
T TIGR01211       501 GVREYYRKL--GYELDGP  516 (522)
T ss_pred             hHHHHHHHC--CCEEEcc
Confidence            999999999  9998775

The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.

>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A

Probab=98.54  E-value=5.7e-07  Score=74.49  Aligned_cols=74  Identities=18%  Similarity=0.230  Sum_probs=62.9

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      +++++||.+.+....+....++|+ +.|.++|||+|+|+.++..+.+.+ +..|+.+|.+.+...   |..+++|+  ||
T Consensus        65 ~~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~--GF  141 (142)
T PF13302_consen   65 DDGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKL--GF  141 (142)
T ss_dssp             TTTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHT--T-
T ss_pred             cCCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHc--CC
Confidence            557899999985554455679999 779999999999999999999999 799999998877763   99999999  99


Q ss_pred             E
Q 048173          137 A  137 (359)
Q Consensus       137 ~  137 (359)
                      +
T Consensus       142 ~  142 (142)
T PF13302_consen  142 E  142 (142)
T ss_dssp             E
T ss_pred             C
Confidence            6

...

>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional

Probab=98.52  E-value=5.7e-07  Score=80.05  Aligned_cols=78  Identities=9%  Similarity=0.052  Sum_probs=64.6

Q ss_pred             CCCcEEEEEEeeecCCCC-ceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPADT-QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~-~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      ++|++||.+.++...... +.++|. +.|+++|||+|+|+.+++.+.+.+.+ +|+++|.+.+..   .|..|++|+  |
T Consensus        84 ~~~~~iG~i~l~~~~~~~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~--G  160 (194)
T PRK10809         84 DEKEIIGVANFSNVVRGSFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARL--G  160 (194)
T ss_pred             CCCeEEEEEEEEeecCCCeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHC--C
Confidence            467999999987554322 345555 67999999999999999999999987 699999888866   499999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      |+..+.
T Consensus       161 f~~~g~  166 (194)
T PRK10809        161 FEKEGY  166 (194)
T ss_pred             CcEEee
Confidence            997665

>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A

Probab=98.51  E-value=1.2e-07  Score=71.36  Aligned_cols=57  Identities=21%  Similarity=0.352  Sum_probs=44.1

Q ss_pred             eEEEEcccCcch--HHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHH
Q 048173          253 FRITLMNIADDS--KKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSW  310 (359)
Q Consensus       253 prI~fSgl~~e~--kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~W  310 (359)
                      .+|++||+.+.+  ...++++.+||.+..+ ..++||||+ ....+.|+-.|..   +||+|+|
T Consensus         1 ~~i~~sg~~~~~~~~l~~~i~~~Gg~~~~~lt~~~THLI~-~~~~~~K~~~A~~~gi~vV~~~W   63 (63)
T PF12738_consen    1 VVICFSGFSGKERSQLRKLIEALGGKYSKDLTKKTTHLIC-SSPEGKKYRKAKEWGIPVVSPDW   63 (63)
T ss_dssp             -EEEEEEB-TTTCCHHHHHHHCTT-EEESSSSTT-SEEEE-ES--HHHHHHHHHCTSEEEEHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHHHCCCEEeccccCCceEEEE-eCCCcHHHHHHHHCCCcEECCCC
Confidence            378999998863  3458899999999998 889999999 4568888888877   9999999

>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase

Probab=98.50  E-value=6.4e-07  Score=75.92  Aligned_cols=77  Identities=10%  Similarity=0.068  Sum_probs=63.7

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|++||++.+.........++|..+ ++|.+| +|+|+.++.++++.+.+ .|+++|.+.+..   .|..||+|+  ||
T Consensus        58 ~~g~~vG~~~~~~~~~~~~~~~~g~~-~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~--Gf  133 (156)
T TIGR03585        58 QESRPIGVISFTDINLVHKSAFWGIY-ANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKF--GF  133 (156)
T ss_pred             ECCEEEEEEEEEecChhhCeEEEEEE-eChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHc--CC
Confidence            67999999987655533345777765 999999 99999999999999884 799999876544   499999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       134 ~~~g~  138 (156)
T TIGR03585       134 EREGV  138 (156)
T ss_pred             eEeee
Confidence            98875

Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.

>PRK01346 hypothetical protein; Provisional

Probab=98.49  E-value=4.9e-07  Score=90.12  Aligned_cols=79  Identities=11%  Similarity=0.052  Sum_probs=65.8

Q ss_pred             cCCCCcEEEEEEeeecC---C-C--CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhc
Q 048173           59 FLNLGKVVAAVIYQIVP---A-D--TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQ  132 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~---~-d--~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~  132 (359)
                      +.++|+|||.+.+....   + +  ...++|..++|+|+|||+|||+.|+.++++.+++.|+..+++++..  .+||+|.
T Consensus        52 a~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~~~Y~r~  129 (411)
T PRK01346         52 AFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--GGIYGRF  129 (411)
T ss_pred             EEECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--hhhHhhC
Confidence            34678999988764321   1 1  1458899999999999999999999999999999999999998875  6899999


Q ss_pred             ccCcEEEEe
Q 048173          133 VQDFASVAE  141 (359)
Q Consensus       133 ~~GF~~~~e  141 (359)
                        ||+....
T Consensus       130 --Gf~~~~~  136 (411)
T PRK01346        130 --GYGPATY  136 (411)
T ss_pred             --CCeeccc
Confidence              9997664

>PRK10562 putative acetyltransferase; Provisional

Probab=98.48  E-value=4.9e-07  Score=76.89  Aligned_cols=69  Identities=19%  Similarity=0.209  Sum_probs=53.9

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEe---ccccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWD---DKESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a---~~~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+..  .    ..|..++|+|+|||+|+|+.|++.+++.+.     ++.+.+   +..|..||+|+  ||+
T Consensus        55 ~~~~~iG~~~~~~--~----~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~-----~~~~~v~~~N~~s~~~y~k~--Gf~  121 (145)
T PRK10562         55 EDGKLLGFVSVLE--G----RFVGALFVAPKAVRRGIGKALMQHVQQRYP-----HLSLEVYQKNQRAVNFYHAQ--GFR  121 (145)
T ss_pred             ECCEEEEEEEEee--c----cEEEEEEECHHHcCCCHHHHHHHHHHhhCC-----eEEEEEEcCChHHHHHHHHC--CCE
Confidence            5689999987531  1    358889999999999999999999988543     443333   33589999999  999


Q ss_pred             EEEee
Q 048173          138 SVAEV  142 (359)
Q Consensus       138 ~~~e~  142 (359)
                      .++..
T Consensus       122 ~~~~~  126 (145)
T PRK10562        122 IVDSA  126 (145)
T ss_pred             Ecccc
Confidence            98853

>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]

Probab=98.47  E-value=5.1e-07  Score=81.23  Aligned_cols=78  Identities=15%  Similarity=0.113  Sum_probs=67.7

Q ss_pred             CCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEe---ccccHHHHhhcccC
Q 048173           62 LGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWD---DKESSFFFLKQVQD  135 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a---~~~A~~Fw~K~~~G  135 (359)
                      +++++|-+.+..++.   ..+.-+|--++|.|+|||+|+|+.|++.+.++|.++|..++.-.+   +..|..||+|.  |
T Consensus        63 ~~~~aGf~~yf~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~--g  140 (163)
T KOG3216|consen   63 GEVVAGFALYFNNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKV--G  140 (163)
T ss_pred             CCceeEEeeeecccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHh--C
Confidence            778999888776655   448899999999999999999999999999999999999994444   44699999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      ++..++
T Consensus       141 aq~l~~  146 (163)
T KOG3216|consen  141 AQDLKE  146 (163)
T ss_pred             ccccce
Confidence            997766

>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=98.44  E-value=4.9e-07  Score=80.08  Aligned_cols=80  Identities=21%  Similarity=0.193  Sum_probs=70.6

Q ss_pred             cCCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhccc
Q 048173           59 FLNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQ  134 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~  134 (359)
                      ....++|||.+.|.|.--    -+-.+-|--..||++||||++|+.|++.|...++++|.-+|.+.-...-.+||+|+  
T Consensus        60 d~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKc--  137 (150)
T KOG3396|consen   60 DKESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKC--  137 (150)
T ss_pred             eCCcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHc--
Confidence            346789999999988654    22456689999999999999999999999999999999999999999999999999  


Q ss_pred             CcEEEE
Q 048173          135 DFASVA  140 (359)
Q Consensus       135 GF~~~~  140 (359)
                      ||+..+
T Consensus       138 G~s~~~  143 (150)
T KOG3396|consen  138 GYSNAG  143 (150)
T ss_pred             Cccccc
Confidence            998654

>COG2153 ElaA Predicted acyltransferase [General function prediction only]

Probab=98.41  E-value=8.8e-07  Score=79.15  Aligned_cols=93  Identities=18%  Similarity=0.200  Sum_probs=77.4

Q ss_pred             CCcEEEEEEeeecCCCCceee--eeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEeccccHHHHhhcccCcEE
Q 048173           62 LGKVVAAVIYQIVPADTQYAE--VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~d~~~a~--I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      +|++||+.+|  .+++.++.+  |+..+|++++||+|+|+.|+.++.+.+.+.. =+.+.+-+-.--..||...  ||+.
T Consensus        58 ~g~LvAyaRL--l~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~--GFv~  133 (155)
T COG2153          58 DGELVAYARL--LPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASF--GFVR  133 (155)
T ss_pred             CCeEEEEEec--CCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHHh--CcEE
Confidence            8999999996  444444444  9999999999999999999999999999888 4556666666689999999  9999


Q ss_pred             EEeecccCcccCcchhhhhhhcCC
Q 048173          139 VAEVDTEGRAGRLPLRQKFRKSTE  162 (359)
Q Consensus       139 ~~e~~~~g~~~~~~~~~~m~K~l~  162 (359)
                      .+|.=.+..|.|..    |+....
T Consensus       134 ~~e~yledGIpHv~----M~r~~~  153 (155)
T COG2153         134 VGEEYLEDGIPHVG----MIREVI  153 (155)
T ss_pred             cCchhhcCCCCchh----hhhccc
Confidence            99877766799998    776543

>KOG3397 consensus Acetyltransferases [General function prediction only]

Probab=98.28  E-value=1.6e-06  Score=79.79  Aligned_cols=79  Identities=14%  Similarity=0.179  Sum_probs=71.5

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      ....+|||-.+|.-.....+-..+-...|+.+.||+|+|+.|++.+|..++..|++++++-+..+ .+||+..  ||+.-
T Consensus        63 E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ-~~FYe~l--GYe~c  139 (225)
T KOG3397|consen   63 EENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQ-CRFYESL--GYEKC  139 (225)
T ss_pred             ccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccc-hhhhhhh--ccccc
Confidence            56678999999888887777788999999999999999999999999999999999999999976 8999999  99965


Q ss_pred             Ee
Q 048173          140 AE  141 (359)
Q Consensus       140 ~e  141 (359)
                      +.
T Consensus       140 ~P  141 (225)
T KOG3397|consen  140 DP  141 (225)
T ss_pred             Cc
Confidence            54

>COG3393 Predicted acetyltransferase [General function prediction only]

Probab=98.12  E-value=8.4e-06  Score=78.92  Aligned_cols=79  Identities=19%  Similarity=0.251  Sum_probs=66.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEE-e-ccccHHHHhhcccCcEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW-D-DKESSFFFLKQVQDFAS  138 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~-a-~~~A~~Fw~K~~~GF~~  138 (359)
                      ++|+||+...-  ......+++|.-.+++|+|||||+++.++.+|.+.+-..|-..++.. + +..|..=|+|.  ||+.
T Consensus       184 ~d~~iVa~A~t--~a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~ri--GF~~  259 (268)
T COG3393         184 GDGKIVAKAET--AAENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRI--GFRE  259 (268)
T ss_pred             cCCcEEEeeec--cccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHh--CCee
Confidence            56699999883  44455899999999999999999999999999999999996655444 3 33699999999  9999


Q ss_pred             EEeec
Q 048173          139 VAEVD  143 (359)
Q Consensus       139 ~~e~~  143 (359)
                      +++..
T Consensus       260 ~g~~~  264 (268)
T COG3393         260 IGEFR  264 (268)
T ss_pred             cceEE
Confidence            98754

>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]

Probab=98.11  E-value=5.7e-06  Score=76.81  Aligned_cols=78  Identities=21%  Similarity=0.241  Sum_probs=66.2

Q ss_pred             cEEEEEEeeecCC-CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEEE
Q 048173           64 KVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFASV  139 (359)
Q Consensus        64 ~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~  139 (359)
                      ++||-..+.+.-. +....|++++-|.+.|||+|||+.|++.|+..+.....++|++-++.   .|.+||.++  ||.+.
T Consensus       103 ~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~--gf~~~  180 (202)
T KOG2488|consen  103 KLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRL--GFVVD  180 (202)
T ss_pred             ceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHc--CcccC
Confidence            7888766555444 55789999999999999999999999999999999999999777666   499999999  99987


Q ss_pred             Eeec
Q 048173          140 AEVD  143 (359)
Q Consensus       140 ~e~~  143 (359)
                      .+-+
T Consensus       181 ~~sp  184 (202)
T KOG2488|consen  181 EESP  184 (202)
T ss_pred             CCCC
Confidence            6433

>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]

Probab=98.02  E-value=5e-05  Score=69.33  Aligned_cols=83  Identities=17%  Similarity=0.144  Sum_probs=64.8

Q ss_pred             CCCCcEEEEEEeeecCCCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      .++|+|+|-+.+....+-.  +..--....|+|++||+|||++|+++|..++..+|++.++.....   .|..|+++.  
T Consensus        59 ~~~g~v~G~a~~~~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~--  136 (169)
T COG1247          59 EEDGKVLGYASAGPFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKL--  136 (169)
T ss_pred             cCCCeEEEEEEeeeccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHC--
Confidence            4669999988855444422  222345688999999999999999999999999999998554443   499999999  


Q ss_pred             CcEEEEeecc
Q 048173          135 DFASVAEVDT  144 (359)
Q Consensus       135 GF~~~~e~~~  144 (359)
                      ||+..+..+.
T Consensus       137 GF~~~G~~~~  146 (169)
T COG1247         137 GFEEVGTFPE  146 (169)
T ss_pred             CCEEeccccc
Confidence            9999884333

>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A

Probab=97.97  E-value=3.1e-05  Score=61.65  Aligned_cols=67  Identities=13%  Similarity=0.218  Sum_probs=51.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQ  132 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~  132 (359)
                      ++|+.+|.+.+..   +++.-.|.|..|+|++||||+|+.|++++.+.|++.|.+-+-.-.+  +..|+.|+
T Consensus         6 ~~g~~~a~l~Y~~---~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~p~C~y--~~~~~~~h   72 (78)
T PF14542_consen    6 DDGEEIAELTYRE---DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVVPTCSY--VAKYFRRH   72 (78)
T ss_dssp             SSTTEEEEEEEEE---SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEEETSHH--HHHHHHH-
T ss_pred             ECCEEEEEEEEEe---CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEEEECHH--HHHHHHhC
Confidence            5689999999865   3344669999999999999999999999999999999965533222  36677665

>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]

Probab=97.95  E-value=2.8e-05  Score=76.54  Aligned_cols=78  Identities=18%  Similarity=0.230  Sum_probs=68.9

Q ss_pred             ccCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcE
Q 048173           58 SFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFA  137 (359)
Q Consensus        58 ~~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~  137 (359)
                      ...++++||||+-+  .+.     -|++.||++.+||.|+.=.|+.+|...+-++|..++|+.+-.....||..+  ||.
T Consensus        41 ~~~~~~~iiacGsi--aGn-----vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~~--GF~  111 (352)
T COG3053          41 IYRDNEEIIACGSI--AGN-----VIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQC--GFS  111 (352)
T ss_pred             EEcCCCcEEEeccc--ccc-----eeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHhC--Cce
Confidence            34477999999982  333     399999999999999999999999999999999999999999999999999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      .+..++.
T Consensus       112 ~i~~~~~  118 (352)
T COG3053         112 EIASAEN  118 (352)
T ss_pred             EeeccCc
Confidence            8876543

>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]

Probab=97.90  E-value=5.2e-05  Score=64.56  Aligned_cols=77  Identities=19%  Similarity=0.146  Sum_probs=66.0

Q ss_pred             CCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccC
Q 048173           62 LGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      ++++||.+.++..++  +.+.++|.... +|+|+|+|+|+..+.++.+.+-+ +|+++|.+.+...   |....+|+  |
T Consensus        76 ~~~~iG~~~~~~~~~~~~~~~~~ig~~l-~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~--G  152 (187)
T COG1670          76 DGELIGVIGLSDIDRAANGDLAEIGYWL-DPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKL--G  152 (187)
T ss_pred             CCeEEEEEEEEEeccccccceEEEEEEE-ChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHc--C
Confidence            569999999887763  45667776665 99999999999999999999887 9999998877763   99999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      |+..+.
T Consensus       153 f~~eg~  158 (187)
T COG1670         153 FRLEGE  158 (187)
T ss_pred             Chhhhh
Confidence            998775

>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]

Probab=97.81  E-value=2.1e-05  Score=57.01  Aligned_cols=47  Identities=21%  Similarity=0.242  Sum_probs=42.1

Q ss_pred             eeE-EEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCc
Q 048173           83 VPL-AAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDF  136 (359)
Q Consensus        83 I~~-~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF  136 (359)
                      +.. ++|+|+|||+|||+.|++++++.++..|+.     ....+..||.+.  ||
T Consensus        83 ~~~~l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~~--~~  130 (156)
T COG0454          83 LDARLYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEKN--GF  130 (156)
T ss_pred             ceeeEEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHhc--CC
Confidence            444 999999999999999999999999999987     555689999999  98

>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B

Probab=97.79  E-value=6.6e-05  Score=69.98  Aligned_cols=60  Identities=23%  Similarity=0.265  Sum_probs=41.5

Q ss_pred             ceeeeeEEEeccCccccChHHHHHHHHHHHH-------------------------HHcCCcEE-EEEecc-ccHHHHhh
Q 048173           79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-------------------------QSVGIRTI-FCWDDK-ESSFFFLK  131 (359)
Q Consensus        79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-------------------------k~~GI~~I-~l~a~~-~A~~Fw~K  131 (359)
                      ..+-|-.+||||++|++|+|+.+++.+++.+                         +..++.-+ ...+.. +=-.||.|
T Consensus        89 ~g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k  168 (196)
T PF13718_consen   89 SGARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQK  168 (196)
T ss_dssp             EEEEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHC
T ss_pred             cceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHH
Confidence            3466889999999999999999999999999                         47788877 333332 34699999


Q ss_pred             cccCcEEEE
Q 048173          132 QVQDFASVA  140 (359)
Q Consensus       132 ~~~GF~~~~  140 (359)
                      +  ||..+.
T Consensus       169 ~--gf~pv~  175 (196)
T PF13718_consen  169 N--GFVPVY  175 (196)
T ss_dssp             T--T-EEEE
T ss_pred             C--CcEEEE
Confidence            9  999765

>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]

Probab=97.78  E-value=6.1e-05  Score=69.82  Aligned_cols=83  Identities=16%  Similarity=0.148  Sum_probs=65.9

Q ss_pred             eeeeeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEecc---ccHHHHhhcccCcEEEEeecccCcccCcchhh
Q 048173           80 YAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDK---ESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQ  155 (359)
Q Consensus        80 ~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~---~A~~Fw~K~~~GF~~~~e~~~~g~~~~~~~~~  155 (359)
                      ..||-++.|.+.||.+|||+.|++.+.+.+.... ++.|++.+..   .|..||++.  ||+.+...+.+-.+...+   
T Consensus        89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~--gF~~~~~~~~~y~~~~~~---  163 (187)
T KOG3138|consen   89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKR--GFEIVERLKNYYSILGPP---  163 (187)
T ss_pred             eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhc--CceEeeccccccccccCc---
Confidence            4899999999999999999999999999999999 8888666544   699999999  999999866643222222   


Q ss_pred             hhhhcCCCCcEEEeccccc
Q 048173          156 KFRKSTEPERVVIDGCSRE  174 (359)
Q Consensus       156 ~m~K~l~~~~~m~~~l~~~  174 (359)
                             +.-+|.++++..
T Consensus       164 -------~~~~l~~~~~~~  175 (187)
T KOG3138|consen  164 -------DDSFLRKLLIHG  175 (187)
T ss_pred             -------chhhhhhheecC
Confidence                   225666677654

>KOG3226 consensus DNA repair protein [Replication, recombination and repair]

Probab=97.74  E-value=2.6e-05  Score=78.69  Aligned_cols=82  Identities=17%  Similarity=0.270  Sum_probs=65.8

Q ss_pred             CCceEEEEcccCc-c-hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhc--c-cccCHHHHHHHHhCCCCCCC
Q 048173          250 GKCFRITLMNIAD-D-SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTAL--S-WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       250 ~~~prI~fSgl~~-e-~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AI--a-wIVsp~WL~eS~k~g~flDE  323 (359)
                      .+.+.+++|||.. + ...+...-.||+++-.| +..||||||. ..-|.||=.-.  . -||+-+||.+|++.++.||-
T Consensus       318 L~GVV~VlSGfqNP~Rs~LRskAl~LGAkY~pDW~~gsThLICA-F~NTPKy~QV~g~Gg~IV~keWI~~Cy~~kk~lp~  396 (508)
T KOG3226|consen  318 LEGVVFVLSGFQNPERSTLRSKALTLGAKYQPDWNAGSTHLICA-FPNTPKYRQVEGNGGTIVSKEWITECYAQKKLLPI  396 (508)
T ss_pred             hhceEEEEecccCchHHHHHHHHHhhcccccCCcCCCceeEEEe-cCCCcchhhcccCCceEeeHHHHHHHHHHHhhccH
Confidence            4567889999954 3 33456667899999999 8899999997 55666665444  4 99999999999999999999


Q ss_pred             CcceecCcc
Q 048173          324 SFYMLNDDG  332 (359)
Q Consensus       324 e~Y~L~D~e  332 (359)
                      .-|++...+
T Consensus       397 rrYlm~~~~  405 (508)
T KOG3226|consen  397 RRYLMHAGK  405 (508)
T ss_pred             HHHHhcCCC
Confidence            999987553

>COG2388 Predicted acetyltransferase [General function prediction only]

Probab=97.49  E-value=0.00019  Score=60.32  Aligned_cols=56  Identities=16%  Similarity=0.227  Sum_probs=50.3

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI  117 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I  117 (359)
                      .++|+.+|-+.+...+++.  --|.|..|++++||||||+.|++++.+.+++.|.+-|
T Consensus        21 ~~~G~~~~e~~y~~~~~~~--i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kii   76 (99)
T COG2388          21 TDEGEVIGEATYYDRGENL--IIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKII   76 (99)
T ss_pred             ecCCcEEEEEEEecCCCCE--EEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEc
Confidence            3788899999987777644  7799999999999999999999999999999999766

>PLN03123 poly [ADP-ribose] polymerase; Provisional

Probab=97.21  E-value=0.00098  Score=74.83  Aligned_cols=83  Identities=11%  Similarity=0.107  Sum_probs=64.0

Q ss_pred             CCCCceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCC--CCcHHHHhhc--c-cccCHHHHHHHHhCCC
Q 048173          248 PNGKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKV--RKTLNFFTAL--S-WIVSPSWLKESFGEGR  319 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~--~RT~KfL~AI--a-wIVsp~WL~eS~k~g~  319 (359)
                      .+-++.+|.++|-.+.  ...++.|+.+||++... ...|||||+..-  ++..|+-.|-  . .||+.+||.+|.+.+.
T Consensus       392 ~~l~~~~i~i~G~~~~~~~~~k~~Ie~~GG~~s~~v~~~~t~l~tt~e~~k~~~kv~qAk~~~ipIVsedwL~ds~~~~~  471 (981)
T PLN03123        392 EFLGDLKVSIVGASKEKVTEWKAKIEEAGGVFHATVKKDTNCLVVCGELDDEDAEMRKARRMKIPIVREDYLVDCFKKKK  471 (981)
T ss_pred             CCcCCeEEEEecCCCCcHHHHHHHHHhcCCEEeeeccCCceEEEccHHhhhcchHHHHHHhcCCCcccHHHHHHHHhccc
Confidence            4456789999887554  33357799999999988 668999999862  3444544443  3 9999999999999999


Q ss_pred             CCCCCcceecC
Q 048173          320 FVDESFYMLND  330 (359)
Q Consensus       320 flDEe~Y~L~D  330 (359)
                      .+++..|.+..
T Consensus       472 ~~p~~~y~~~~  482 (981)
T PLN03123        472 KLPFDKYKLEA  482 (981)
T ss_pred             cCcchhhhhcc
Confidence            99999997754

>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]

Probab=97.18  E-value=0.0019  Score=58.86  Aligned_cols=98  Identities=14%  Similarity=0.141  Sum_probs=73.8

Q ss_pred             CCCCcEEEEEEeeecCCCCce-eeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPADTQY-AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~-a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      ..+|+|-|-|.+-..+.++.. +-|--++|.|+||+.|+|+.++..+++.....+.--|-+.++.   .|..||+|+  |
T Consensus        48 ~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkL--G  125 (173)
T KOG3234|consen   48 APTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKL--G  125 (173)
T ss_pred             CCCCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhc--C
Confidence            567899999998776665532 4477889999999999999999999999999877777555544   599999999  9


Q ss_pred             cEEEEeecc---cCcccCcchhhhhhhcCC
Q 048173          136 FASVAEVDT---EGRAGRLPLRQKFRKSTE  162 (359)
Q Consensus       136 F~~~~e~~~---~g~~~~~~~~~~m~K~l~  162 (359)
                      |++...+-.   .|+=.+   -=+|||+|.
T Consensus       126 Y~~YR~Vi~YY~~g~ded---a~dMRKalS  152 (173)
T KOG3234|consen  126 YSVYRTVIEYYSVGPDED---AYDMRKALS  152 (173)
T ss_pred             ceEEEeeeeeeccCCCcc---hHhhhhhhc
Confidence            998665433   121111   125899888

>PLN03122 Poly [ADP-ribose] polymerase; Provisional

Probab=97.17  E-value=0.001  Score=73.46  Aligned_cols=81  Identities=15%  Similarity=0.073  Sum_probs=64.9

Q ss_pred             CCCceEEEEcccCcc--hHHHHHHHhcCcEEecCCCCeeEEEeCCCC---C-cHHHHhhcc---cccCHHHHHHHHhCCC
Q 048173          249 NGKCFRITLMNIADD--SKKVHLTKNLRGAVTSDGITSTHVVAGKVR---K-TLNFFTALS---WIVSPSWLKESFGEGR  319 (359)
Q Consensus       249 ~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d~~~~THLVa~~~~---R-T~KfL~AIa---wIVsp~WL~eS~k~g~  319 (359)
                      +-...+|+|||--..  +..+++|+.+||.|+++.+.+||+|+....   . +-|+-.|-.   .||+.+||.+|++.++
T Consensus       189 pL~G~~fviTGtl~~sr~elK~~Ie~~GGkvsssVs~~T~lIvt~~ev~k~gsSKlkkAk~lgIpIVsEd~L~d~i~~~k  268 (815)
T PLN03122        189 PFSGMMISLSGRLSRTHQYWKKDIEKHGGKVANSVEGVTCLVVSPAERERGGSSKIAEAMERGIPVVREAWLIDSIEKQE  268 (815)
T ss_pred             CcCCcEEEEeCCCCCCHHHHHHHHHHcCCEEccccccceEEEEcCccccccCccHHHHHHHcCCcCccHHHHHHHHhcCC
Confidence            456789999997543  334578999999999999999999987633   2 245555544   9999999999999999


Q ss_pred             CCCCCcceec
Q 048173          320 FVDESFYMLN  329 (359)
Q Consensus       320 flDEe~Y~L~  329 (359)
                      .+++.+|.+.
T Consensus       269 ~~~~~~y~l~  278 (815)
T PLN03122        269 AQPLEAYDVV  278 (815)
T ss_pred             cccchhhhhc
Confidence            9999999984

>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length

Probab=97.05  E-value=0.0017  Score=57.06  Aligned_cols=72  Identities=22%  Similarity=0.272  Sum_probs=51.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc-------cHHHHhhcc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE-------SSFFFLKQV  133 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~-------A~~Fw~K~~  133 (359)
                      =|++++|++.+.+..   +.+.|.+|+|++.=||+|||..|++++...+  -+|+...+.....       -..|-+.+ 
T Consensus        45 FNdRlLgAv~v~~~~---~~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~-  118 (128)
T PF12568_consen   45 FNDRLLGAVKVTISG---QQAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQAC-  118 (128)
T ss_dssp             ETTEEEEEEEEEEET---TEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHH-
T ss_pred             echheeeeEEEEEcC---cceEEeeEEEeeccccccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHHHHHHc-
Confidence            588999999977643   4688999999999999999999999999988  4566665555532       24899999 


Q ss_pred             cCcEEE
Q 048173          134 QDFASV  139 (359)
Q Consensus       134 ~GF~~~  139 (359)
                       ||...
T Consensus       119 -GF~~~  123 (128)
T PF12568_consen  119 -GFSAQ  123 (128)
T ss_dssp             -T-EE-
T ss_pred             -Ccccc
Confidence             99643

It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.

>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]

Probab=97.05  E-value=0.0026  Score=58.31  Aligned_cols=93  Identities=17%  Similarity=0.232  Sum_probs=69.9

Q ss_pred             hhccCccccccccccceeeccC-CCCcEEEEEEeeecC--CCC-ceeeeeEEEeccCccccChHHHHHHHHHHH-HHHcC
Q 048173           39 LYMGSIHPLINLCSMYKVVSFL-NLGKVVAAVIYQIVP--ADT-QYAEVPLAAVSSIYQHKGVGRLLYLKLRKR-LQSVG  113 (359)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~-~~g~IVgvi~l~i~~--~d~-~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~-lk~~G  113 (359)
                      ||-++--|-+       |-.+. ++|+|||-++--+..  .|+ ..+.|..+||...||+.|||+.|+...... ...-+
T Consensus        33 lyh~lswp~l-------SyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~  105 (193)
T KOG3235|consen   33 LYHGLSWPQL-------SYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYE  105 (193)
T ss_pred             HHhhcccccc-------eEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhc
Confidence            5666666654       33333 788999977755444  233 378999999999999999999998765443 34556


Q ss_pred             CcEEEEEeccc---cHHHHh-hcccCcEEEE
Q 048173          114 IRTIFCWDDKE---SSFFFL-KQVQDFASVA  140 (359)
Q Consensus       114 I~~I~l~a~~~---A~~Fw~-K~~~GF~~~~  140 (359)
                      ...|.+.+++.   |.+.|. .+  ||++.+
T Consensus       106 A~yvsLHVR~SNraAl~LY~~tl--~F~v~e  134 (193)
T KOG3235|consen  106 AKYVSLHVRKSNRAALHLYKNTL--GFVVCE  134 (193)
T ss_pred             ceEEEEeeecccHHHHHhhhhcc--ceEEee
Confidence            88899988884   888998 88  999877

>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]

Probab=96.98  E-value=0.00068  Score=74.07  Aligned_cols=56  Identities=23%  Similarity=0.331  Sum_probs=44.6

Q ss_pred             eeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE-EEEec-cccHHHHhhcccCcEEEE
Q 048173           82 EVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI-FCWDD-KESSFFFLKQVQDFASVA  140 (359)
Q Consensus        82 ~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I-~l~a~-~~A~~Fw~K~~~GF~~~~  140 (359)
                      -|-.+||||++|++|||+++++.+.++++ .|..-+ .-.+. .+=-.||.||  ||..+.
T Consensus       533 RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rn--GF~pVh  590 (758)
T COG1444         533 RIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRN--GFVPVH  590 (758)
T ss_pred             eEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHc--CeEEEE
Confidence            47789999999999999999999999998 455555 12222 2357899999  999765

>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]

Probab=96.69  E-value=0.0046  Score=55.18  Aligned_cols=65  Identities=23%  Similarity=0.286  Sum_probs=59.5

Q ss_pred             CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc-----cHHHHhhcccCcEEEEeecc
Q 048173           78 TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE-----SSFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus        78 ~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~-----A~~Fw~K~~~GF~~~~e~~~  144 (359)
                      +.+-+|....|....||+|+||+|+..+...++..|...+.|.++-.     |-.|--..  ||..+++...
T Consensus        82 e~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaal--GF~eVG~a~i  151 (167)
T COG3818          82 ENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAAL--GFHEVGQATI  151 (167)
T ss_pred             CceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhc--CceEccceEE
Confidence            47789999999999999999999999999999999999999998873     88899999  9999997655

>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]

Probab=96.33  E-value=0.0039  Score=56.94  Aligned_cols=59  Identities=15%  Similarity=0.222  Sum_probs=50.5

Q ss_pred             eeeeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEeccccHHHHhhcccCcEEEEe
Q 048173           81 AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDKESSFFFLKQVQDFASVAE  141 (359)
Q Consensus        81 a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~K~~~GF~~~~e  141 (359)
                      +-|..++|+|+||.+|.|..|+..-.+.+-+.- .+++++.+-+-=.+||++.  ||..+++
T Consensus       102 i~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr~--gFk~vgp  161 (190)
T KOG4144|consen  102 IHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYERF--GFKAVGP  161 (190)
T ss_pred             eeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccchhHhc--Cceeecc
Confidence            559999999999999999999988666555544 5678888888889999999  9999996

>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans

Probab=96.08  E-value=0.024  Score=52.47  Aligned_cols=78  Identities=19%  Similarity=0.173  Sum_probs=59.7

Q ss_pred             CCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G  135 (359)
                      +..+|||..-+....+     |+.+.+|+++-++|+|||+|+++.+-+-+.++++..+-+.+.+ +...+..||.|. -|
T Consensus        54 gT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N~~~~-~~~~~~~~w~k~-~G  131 (181)
T PF06852_consen   54 GTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDNSVAQ-GNVKMSNFWHKM-FG  131 (181)
T ss_pred             CCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCceeee-cCHHHHHHHHHH-hC
Confidence            4568998877644332     5679999999999999999999877777778888887776664 555678899987 46


Q ss_pred             cEEEE
Q 048173          136 FASVA  140 (359)
Q Consensus       136 F~~~~  140 (359)
                      |...+
T Consensus       132 ~~~~~  136 (181)
T PF06852_consen  132 FDDYG  136 (181)
T ss_pred             CCCCc
Confidence            55444

Note that some proteins in the entry contain more than one copy of this region.

>COG3981 Predicted acetyltransferase [General function prediction only]

Probab=96.07  E-value=0.03  Score=51.64  Aligned_cols=89  Identities=16%  Similarity=0.105  Sum_probs=63.1

Q ss_pred             CCCcEEEEEEeeecCCCCce---eeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPADTQY---AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~---a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~  134 (359)
                      +||++||.+.+--.=.+.-+   +-|+ ..|.|+.||||.|+.+++-..+.|+.+||++|.+-++.+   |..==++|  
T Consensus        76 ~d~~ivG~i~lRh~Ln~~ll~~gGHIG-Y~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~N--  152 (174)
T COG3981          76 EDGQIVGFINLRHQLNDFLLEEGGHIG-YSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEAN--  152 (174)
T ss_pred             cCCcEEEEEEeeeecchHHHhcCCccc-ceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhc--
Confidence            58999999875322221100   1122 379999999999999999999999999999998887774   78888888  


Q ss_pred             CcEEEEeeccc-CcccCcc
Q 048173          135 DFASVAEVDTE-GRAGRLP  152 (359)
Q Consensus       135 GF~~~~e~~~~-g~~~~~~  152 (359)
                      |=.-..++... -.++|+.
T Consensus       153 GGile~~~~~~g~~~~RYW  171 (174)
T COG3981         153 GGILENEFFGEGKEIRRYW  171 (174)
T ss_pred             CCEEeEEEccCCceeeeee
Confidence            75555544442 2345544

>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B

Probab=95.66  E-value=0.053  Score=52.89  Aligned_cols=80  Identities=16%  Similarity=0.124  Sum_probs=61.4

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      ..+|+||+.+.-...+.+.  ++|. ++.+|+|||||+++.+..++.....+.|+.-.+.-.+..|..-=+|+  ||+-.
T Consensus       171 ~~~~~iVs~~~s~~~~~~~--~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~S~~lA~kL--Gf~~~  245 (265)
T PF12746_consen  171 LHDGEIVSGCSSYFVYENG--IEID-IETHPEYRGKGLATAVAAAFILECLENGLYPSWDCHNLASIALAEKL--GFHFD  245 (265)
T ss_dssp             EETTEEEEEEEEEEEETTE--EEEE-EEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EESSHHHHHHHHHC--T--EE
T ss_pred             EECCEEEEEEEEEEEECCE--EEEE-EEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCCCHHHHHHHHHc--CCccc
Confidence            3778998877666666644  7765 56699999999999999999999999999888766677799999999  99987


Q ss_pred             Eeecc
Q 048173          140 AEVDT  144 (359)
Q Consensus       140 ~e~~~  144 (359)
                      .+...
T Consensus       246 ~~Y~~  250 (265)
T PF12746_consen  246 FEYTA  250 (265)
T ss_dssp             EEEEE
T ss_pred             ceeee
Confidence            76444

>KOG3548 consensus DNA damage checkpoint protein RHP9/CRB2/53BP1 [Replication, recombination and repair]

Probab=95.47  E-value=0.0079  Score=66.83  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=40.4

Q ss_pred             EEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCCCcceec
Q 048173          286 HVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLN  329 (359)
Q Consensus       286 HLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L~  329 (359)
                      -||+....||.|+|.|||   +.|++.||.+|.++++.||=.+|+|-
T Consensus       990 lLIsdth~Rt~KYLeaLA~giPcVh~~fI~aC~e~nr~Vdy~~YLLp 1036 (1176)
T KOG3548|consen  990 LLISDTHYRTHKYLEALARGIPCVHNTFIQACGEQNRCVDYTDYLLP 1036 (1176)
T ss_pred             eEeehhhhHHHHHHHHHHcCCCcccHHHHHHHHhccccccchhhccc
Confidence            467777889999999999   89999999999999999999999875

>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]

Probab=95.41  E-value=0.017  Score=60.25  Aligned_cols=80  Identities=15%  Similarity=0.158  Sum_probs=62.1

Q ss_pred             CCCCcEEEEEEeeecCCCCce-------eeeeEEEe----------ccCccccChHHHHHHHHHHHHHHcCCcEEEEEec
Q 048173           60 LNLGKVVAAVIYQIVPADTQY-------AEVPLAAV----------SSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD  122 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~-------a~I~~~AV----------~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~  122 (359)
                      .+++-+||..++-+...+.-+       |-|+.+-|          ...||++|.|+.|++++|..|++.|..+|...+-
T Consensus       413 ~~~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~~~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSg  492 (515)
T COG1243         413 PKNDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGKREDEWQHRGYGRELLEEAERIAREEGAKKILVISG  492 (515)
T ss_pred             chhhhhhheeeecccccchhhhhcccchhhhhhhhccccccccccCcchhhcccHHHHHHHHHHHHHHhhccccEEEEec
Confidence            345668888887665543322       22222222          4789999999999999999999999999999999


Q ss_pred             cccHHHHhhcccCcEEEEe
Q 048173          123 KESSFFFLKQVQDFASVAE  141 (359)
Q Consensus       123 ~~A~~Fw~K~~~GF~~~~e  141 (359)
                      ..+..||.|.  ||+..+.
T Consensus       493 iG~ReYy~k~--GY~~~gp  509 (515)
T COG1243         493 IGVREYYRKL--GYELDGP  509 (515)
T ss_pred             ccHHHHHHHh--CccccCC
Confidence            9999999999  9997664

>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2

Probab=95.33  E-value=0.016  Score=48.00  Aligned_cols=71  Identities=17%  Similarity=0.190  Sum_probs=56.5

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      +.+|++|-=++.      ++++++++..--|+|||||+.+.++..+.+.|+++|+. +++.+.+   .+.....+.  ||
T Consensus         5 gpeG~PVSW~lm------dqtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~~l--g~   75 (89)
T PF08444_consen    5 GPEGNPVSWSLM------DQTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSKSL--GF   75 (89)
T ss_pred             CCCCCEeEEEEe------cccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHHHC--CC
Confidence            467777764441      26788999999999999999999999999999999996 4444443   478888888  88


Q ss_pred             EEE
Q 048173          137 ASV  139 (359)
Q Consensus       137 ~~~  139 (359)
                      ...
T Consensus        76 ~~~   78 (89)
T PF08444_consen   76 IFM   78 (89)
T ss_pred             eec
Confidence            753

3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].

>COG5628 Predicted acetyltransferase [General function prediction only]

Probab=95.21  E-value=0.041  Score=48.49  Aligned_cols=69  Identities=13%  Similarity=0.081  Sum_probs=53.2

Q ss_pred             CCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE-EEEeccccHHHHhhc
Q 048173           61 NLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI-FCWDDKESSFFFLKQ  132 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I-~l~a~~~A~~Fw~K~  132 (359)
                      -+|.+||-+++--.+.   ..+++ |..|++-..|||+|+||+.++++-...+.  .-.| .+--++-|..||.+-
T Consensus        44 ~~~~~igf~l~L~~~~~~~~iD~~-~~efFIi~k~~~~GvGR~aaK~If~~~~g--~w~Va~i~EN~PA~~fwK~~  116 (143)
T COG5628          44 IGGLPVGFALVLDLAHSPTPIDRA-VAEFFIVRKHRRRGVGRAAAKAIFGSAWG--VWQVATVRENTPARAFWKRV  116 (143)
T ss_pred             ECCceeeeeeeecccCCCCccccc-chheEeeehhhccchhHHHHHHHHHHhhc--eEEEEEeccCChhHHHHHhh
Confidence            5788999877644443   33778 99999999999999999999999988764  3334 333344599999998

>KOG1929 consensus Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Replication, recombination and repair]

Probab=95.18  E-value=0.034  Score=61.62  Aligned_cols=84  Identities=19%  Similarity=0.193  Sum_probs=71.5

Q ss_pred             CCCCceEEEEcccCcchHH--HHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCC
Q 048173          248 PNGKCFRITLMNIADDSKK--VHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV  321 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e~kk--~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~fl  321 (359)
                      +.-...+|+.||+...++.  ..++.+.||+.... ....+|++.....-|.|+-+|+-   .||+++|+.+|...+..+
T Consensus       102 p~~~~~~Vc~tgl~~~eK~ei~~~v~k~gg~~~~~L~s~v~~~~~~~~~~~~kYe~al~wn~~v~~~~w~~~s~~~~~~~  181 (811)
T KOG1929|consen  102 PGFFGLKVCLTGLSGDEKSEIKILVPKHGGTLHRSLSSDVNSLKILPEVKTEKYEQALKWNIPVVSDDWLFDSIEKTAVL  181 (811)
T ss_pred             CcccceEEEecccchHHHHHHHHHhhhcccEEehhhhhhhheeeeccccchHHHHHHHhhCCccccHHHHhhhhcccccc
Confidence            4445678999999875443  47788999998887 67788888888888899999998   699999999999999999


Q ss_pred             CCCcceecCc
Q 048173          322 DESFYMLNDD  331 (359)
Q Consensus       322 DEe~Y~L~D~  331 (359)
                      ++++|++.-.
T Consensus       182 ~~~~~e~~~~  191 (811)
T KOG1929|consen  182 ETKPYEGAPV  191 (811)
T ss_pred             cccccccccc
Confidence            9999998874

>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]

Probab=95.14  E-value=0.033  Score=56.50  Aligned_cols=56  Identities=14%  Similarity=0.113  Sum_probs=52.2

Q ss_pred             ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173           79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      ..+.|-..|+.|+|||+|.-++|+.+.++..++.|+.-.+|....  .+||.|-  ||+-
T Consensus        69 ~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P~s--~~iYrKf--Gye~  124 (389)
T COG4552          69 PTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHPFS--GGIYRKF--GYEY  124 (389)
T ss_pred             eccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEeccCc--hhhHhhc--cccc
Confidence            567899999999999999999999999999999999999998876  8999999  9985

>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase

Probab=94.81  E-value=0.12  Score=49.38  Aligned_cols=77  Identities=22%  Similarity=0.257  Sum_probs=62.3

Q ss_pred             CCCcEEEEEEeeec----C------------------------CCCceeeeeEEEeccCcccc--------C--------
Q 048173           61 NLGKVVAAVIYQIV----P------------------------ADTQYAEVPLAAVSSIYQHK--------G--------   96 (359)
Q Consensus        61 ~~g~IVgvi~l~i~----~------------------------~d~~~a~I~~~AV~~~~Qgk--------G--------   96 (359)
                      ++|++||++++...    |                        ...+..||-.|||+++||++        |        
T Consensus        64 ~~g~vvG~~RLl~t~~~~p~~~~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~  143 (241)
T TIGR03694        64 RTGTFVGCVRLVLPNSSDPDQPFPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEA  143 (241)
T ss_pred             CCCCEEEEEEEeccccccccccccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCccccccccccccccccc
Confidence            46899999998752    0                        01368899999999999974        2        


Q ss_pred             ------------hHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           97 ------------VGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        97 ------------IG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                                  +...|+.++.+.+...||++++.++...-...+.+.  |+...
T Consensus       144 ~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~l~r~l~r~--G~~~~  196 (241)
T TIGR03694       144 PFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPRLARLLSRF--GIQFR  196 (241)
T ss_pred             ccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHHHHHHHHHh--CCceE
Confidence                        456799999999999999999999998767778889  98753

Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.

>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain

Probab=94.55  E-value=0.11  Score=42.69  Aligned_cols=63  Identities=16%  Similarity=0.072  Sum_probs=50.7

Q ss_pred             eeeccCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEE
Q 048173           55 KVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW  120 (359)
Q Consensus        55 ~~~~~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~  120 (359)
                      .......+|++||+...... .  +..+.....++++|++.++|..|+.++.+.+.+.|++.+-+-
T Consensus        72 ~l~~~~~~g~~va~~~~~~~-~--~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g  134 (142)
T PF13480_consen   72 RLFVLYDGGEPVAFALGFRH-G--GTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFG  134 (142)
T ss_pred             EEEEEEECCEEEEEEEEEEE-C--CEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEEC
Confidence            33444468999999875443 2  357789999999999999999999999999999999877543

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=94.33  E-value=0.02  Score=61.84  Aligned_cols=81  Identities=21%  Similarity=0.307  Sum_probs=62.3

Q ss_pred             ceEEEEcccCcchH------HHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc----cccCHHHHHHHHhCCCC
Q 048173          252 CFRITLMNIADDSK------KVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS----WIVSPSWLKESFGEGRF  320 (359)
Q Consensus       252 ~prI~fSgl~~e~k------k~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa----wIVsp~WL~eS~k~g~f  320 (359)
                      .-.++|||+.|..-      .-.....+|..++.+ ..++||+|+-+ .+|.|...|.-    |||.+.||..|...+..
T Consensus       444 ~~~~vfSg~~P~~~~~~~s~~~~~~~~~g~vs~~~~~~~~th~i~~~-~gt~k~~~a~~~~~~~Vv~~~wl~~~~e~w~~  522 (635)
T KOG0323|consen  444 GSQIVFSGLHPTGSTDESADILGVAQQLGAVSAPDVSDKTTHLIAAN-AGTKKVYKAVVSGSAKVVNAAWLWRSLEKWGK  522 (635)
T ss_pred             ccceeecccccCcCCcchhhhhhhhhcccceecccccchhhhHHhhc-cCcceeeccccccceeEechhHHHHHHHHhcc
Confidence            34688999888531      113346889887766 78899999764 35666666543    99999999999999999


Q ss_pred             CCCCcceecCccc
Q 048173          321 VDESFYMLNDDGY  333 (359)
Q Consensus       321 lDEe~Y~L~D~e~  333 (359)
                      ++|..|-+.|...
T Consensus       523 v~ek~~~l~~~~~  535 (635)
T KOG0323|consen  523 VEEKLEPLDDDQR  535 (635)
T ss_pred             hhccccccccccc
Confidence            9999999887654

>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]

Probab=93.90  E-value=0.16  Score=46.42  Aligned_cols=62  Identities=21%  Similarity=0.053  Sum_probs=52.1

Q ss_pred             ceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEe---ccccHHHHhhcccCcEEEEee
Q 048173           79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWD---DKESSFFFLKQVQDFASVAEV  142 (359)
Q Consensus        79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a---~~~A~~Fw~K~~~GF~~~~e~  142 (359)
                      -.+++--|--.|..||||+|+..+.++..++.+. ++.+-....   ++-+..||.|.  +|+.+.-.
T Consensus       106 ~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~--~f~q~~~n  171 (185)
T KOG4135|consen  106 ITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKF--LFTQVFYN  171 (185)
T ss_pred             eeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHh--hheeeeee
Confidence            4578888888999999999999999999999864 777777666   44599999999  99977653

>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish

Probab=93.48  E-value=0.12  Score=43.37  Aligned_cols=47  Identities=26%  Similarity=0.181  Sum_probs=35.9

Q ss_pred             CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHH
Q 048173           62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKR  108 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~  108 (359)
                      ++...||+.+-..+++...+++.-|||.++.||.|+|+.|++++.+.
T Consensus        16 ~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d   62 (99)
T cd04264          16 SEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD   62 (99)
T ss_pred             eCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhh
Confidence            44455555543333345779999999999999999999999988876

DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.

>PRK13834 putative autoinducer synthesis protein; Provisional

Probab=93.25  E-value=0.54  Score=43.98  Aligned_cols=77  Identities=12%  Similarity=0.117  Sum_probs=59.9

Q ss_pred             CCCcEEEEEEeeec-------------------CCCCceeeeeEEEeccCccc-c--C----hHHHHHHHHHHHHHHcCC
Q 048173           61 NLGKVVAAVIYQIV-------------------PADTQYAEVPLAAVSSIYQH-K--G----VGRLLYLKLRKRLQSVGI  114 (359)
Q Consensus        61 ~~g~IVgvi~l~i~-------------------~~d~~~a~I~~~AV~~~~Qg-k--G----IG~~Lv~~l~~~lk~~GI  114 (359)
                      ++|+|||+.+|.-.                   +...+..||-.|||++++++ +  +    +...|+..+.+.+...||
T Consensus        61 ~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi  140 (207)
T PRK13834         61 DSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGY  140 (207)
T ss_pred             CCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCC
Confidence            67899999987322                   11347899999999998632 2  2    667899999999999999


Q ss_pred             cEEEEEeccccHHHHhhcccCcEEE
Q 048173          115 RTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus       115 ~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      +.++.++...=+.-+.+.  ||...
T Consensus       141 ~~~~~v~~~~~~r~l~r~--G~~~~  163 (207)
T PRK13834        141 TEIVTATDLRFERILARA--GWPMQ  163 (207)
T ss_pred             CEEEEEECHHHHHHHHHc--CCCeE
Confidence            999999887555667888  98753

>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth

Probab=92.94  E-value=0.61  Score=42.87  Aligned_cols=78  Identities=18%  Similarity=0.096  Sum_probs=61.2

Q ss_pred             CCCcEEEEEEeeecC-------------------CCCceeeeeEEEeccCccc------cChHHHHHHHHHHHHHHcCCc
Q 048173           61 NLGKVVAAVIYQIVP-------------------ADTQYAEVPLAAVSSIYQH------KGVGRLLYLKLRKRLQSVGIR  115 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~-------------------~d~~~a~I~~~AV~~~~Qg------kGIG~~Lv~~l~~~lk~~GI~  115 (359)
                      ++|+|+|+++|.-..                   .+.+.-|+-.|||+++..+      .-+...|+.++.+.+.+.||+
T Consensus        52 ~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~  131 (182)
T PF00765_consen   52 DDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIR  131 (182)
T ss_dssp             ETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-S
T ss_pred             ECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCC
Confidence            459999999987321                   1357889999999998543      246789999999999999999


Q ss_pred             EEEEEeccccHHHHhhcccCcEEEE
Q 048173          116 TIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus       116 ~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      .++.++...-+..+.+.  ||...-
T Consensus       132 ~~v~V~~~~~~r~l~r~--G~~~~~  154 (182)
T PF00765_consen  132 HIVGVVDPAMERILRRA--GWPVRR  154 (182)
T ss_dssp             EEEEEEEHHHHHHHHHC--T-EEEE
T ss_pred             EEEEEEChHHHHHHHHc--CCceEE
Confidence            99999998889999999  999644

Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.

>KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair]

Probab=92.85  E-value=0.13  Score=56.71  Aligned_cols=72  Identities=17%  Similarity=0.228  Sum_probs=50.1

Q ss_pred             EcccCcchH---HHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHH-hhcc---cccCHHHHHHHHhCCCCCCCCccee
Q 048173          257 LMNIADDSK---KVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFF-TALS---WIVSPSWLKESFGEGRFVDESFYML  328 (359)
Q Consensus       257 fSgl~~e~k---k~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL-~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L  328 (359)
                      ++|...+..   ..++|...||.++.+ ....||.|+-...-|-..- .++.   -||.|+||.+|.+..++++=.|+.+
T Consensus       642 lsgt~~~~tk~~le~~ivenGG~iv~nv~p~~~~ci~~a~~et~~vk~~~~~~~cdVl~p~Wlldcc~~~~l~p~~P~~~  721 (881)
T KOG0966|consen  642 LSGTSETHTKAKLEEIIVENGGKIVQNVGPSDTLCIATAGKETTRVKAQAIKRSCDVLKPAWLLDCCKKQRLLPWLPRDL  721 (881)
T ss_pred             ecCCcccccHHHHHHHHHHcCCEEEEcCCCCCcceEEeccccchHHHHHHHhccCceeeHHHHHHHHhhhhccccccHHH
Confidence            566655432   347888999999988 5559999864333222222 2223   9999999999999999887777643

>KOG1929 consensus Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Replication, recombination and repair]

Probab=92.79  E-value=0.15  Score=56.57  Aligned_cols=82  Identities=18%  Similarity=0.186  Sum_probs=58.8

Q ss_pred             CCceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCC
Q 048173          250 GKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       250 ~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDE  323 (359)
                      -.+..|.++..+..  .+....+..+|+..... ....||||++. .+-.+..++.-   .||+|+||.+|.++++.++.
T Consensus       494 ~e~~~~~~s~~~~~~~e~ln~~~~~~gas~~~~f~r~~~~l~~~~-~k~s~~~~~~kw~ip~vT~~wL~e~~rq~~~~~~  572 (811)
T KOG1929|consen  494 FENLTISNSQSAEAEREKLNNLANDLGASNVKTFTRKSTTLLTTS-AKGSKYEIAGKWSIPIVTPDWLYECVRQNKGERN  572 (811)
T ss_pred             ccCceEEeeechHHHHHHHhHhhhhccccccceeeecccEEeccc-cccchhhhccccCCCccChhHHHhhccccCcccc
Confidence            34444544433332  12235677899987776 44449999998 44456666666   89999999999999999999


Q ss_pred             CcceecCcc
Q 048173          324 SFYMLNDDG  332 (359)
Q Consensus       324 e~Y~L~D~e  332 (359)
                      +-|.+....
T Consensus       573 e~~l~~~st  581 (811)
T KOG1929|consen  573 EGFLNGNST  581 (811)
T ss_pred             eeecccccc
Confidence            999987655

>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein

Probab=92.60  E-value=0.39  Score=42.10  Aligned_cols=56  Identities=18%  Similarity=0.290  Sum_probs=47.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC  119 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l  119 (359)
                      .+|++|||+.+-+.+..  ..-|++|. ||++....+|+..+..-.+.+++.|++-+.+
T Consensus        46 ~~~kLiav~v~D~l~~g--lSaVY~fy-DPd~~~~SlG~~~iL~eI~~a~~~~l~y~YL  101 (128)
T PF04377_consen   46 LDGKLIAVAVVDILPDG--LSAVYTFY-DPDYSKRSLGTYSILREIELARELGLPYYYL  101 (128)
T ss_pred             eCCeEEEEEEeecccch--hhheeeee-CCCccccCcHHHHHHHHHHHHHHcCCCEEee
Confidence            79999999887666653  24476666 9999999999999999999999999998864

In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation

>KOG2481 consensus Protein required for normal rRNA processing [RNA processing and modification]

Probab=92.01  E-value=0.14  Score=54.17  Aligned_cols=62  Identities=16%  Similarity=0.266  Sum_probs=48.4

Q ss_pred             HHHHHHhcCcEEecCC-----------CCeeEEEeCCCCCcHHHHhhcccccCHHHHHHHHhCCCCCCCCcceec
Q 048173          266 KVHLTKNLRGAVTSDG-----------ITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLN  329 (359)
Q Consensus       266 k~klik~LGG~V~~d~-----------~~~THLVa~~~~RT~KfL~AIawIVsp~WL~eS~k~g~flDEe~Y~L~  329 (359)
                      ..=+|.++||.|.-+.           ..+||=|++++.-+.++...  --|.|+||.||.-++..++.+.|..+
T Consensus       344 L~fiI~s~GG~V~wd~~~~g~~~~~~d~~ITH~IvDrP~~~~~v~gR--~YvQPQWvfDsvNar~llpt~~Y~~G  416 (570)
T KOG2481|consen  344 LEFIIRSFGGKVSWDPLGIGATYDESDERITHQIVDRPGQQTSVIGR--TYVQPQWVFDSVNARLLLPTEKYFPG  416 (570)
T ss_pred             HHHHHHHcCCceecCccCCCCcccccccceeeeeecccCccceeeee--eeecchhhhhhccchhhccHhhhCCC
Confidence            3456789999987652           45699999988655544332  67999999999999999999888755

>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]

Probab=91.72  E-value=0.24  Score=50.65  Aligned_cols=50  Identities=18%  Similarity=0.281  Sum_probs=43.8

Q ss_pred             cCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccccHHHHhhcccCcEEEEe
Q 048173           90 SIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKESSFFFLKQVQDFASVAE  141 (359)
Q Consensus        90 ~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e  141 (359)
                      ..||+||+|++|++++|..|++ -|-.+|.+.+--....||.|.  ||+..+.
T Consensus       497 ~KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~kl--GY~LdGP  547 (554)
T KOG2535|consen  497 TKFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKL--GYELDGP  547 (554)
T ss_pred             hhhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhh--CeeecCh
Confidence            3689999999999999999985 578888888888899999999  9997664

>KOG1472 consensus Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins [Chromatin structure and dynamics; Transcription]

Probab=91.41  E-value=0.048  Score=59.65  Aligned_cols=98  Identities=23%  Similarity=0.323  Sum_probs=81.0

Q ss_pred             EEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEeccccHHHHhhcccCcEEEEeec
Q 048173           65 VVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDKESSFFFLKQVQDFASVAEVD  143 (359)
Q Consensus        65 IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~  143 (359)
                      +||.+....++. ..+.+|.+.||+.+-|-+|-|+-+++.+.++.++.+ |......|+..|.++|.|+  ||...-..+
T Consensus       431 ~vggi~~r~f~~-k~f~eivf~av~~~eqv~g~g~hlmnhlkd~~~~~~~i~~~ltyad~~aigyfkkq--gfs~ei~~~  507 (720)
T KOG1472|consen  431 VVGGICFRPFPE-KGFTEIVFCAVTTDEQVKGSGTHLMNHLKDYVRSSSTIDYALTYADEGAIGYFKKQ--GFSKEIKFE  507 (720)
T ss_pred             cccccccCcCcc-cCCcceeeccccCcccccccCcCchhhHHHHhhccchHHHHHHhhhhcccccccCc--cchhhcccc
Confidence            888888655554 368999999999999999999999999999999988 8888999999999999999  999543222


Q ss_pred             c---cCcccCcchhhhhhhcCCCCcEEEecccccc
Q 048173          144 T---EGRAGRLPLRQKFRKSTEPERVVIDGCSREG  175 (359)
Q Consensus       144 ~---~g~~~~~~~~~~m~K~l~~~~~m~~~l~~~~  175 (359)
                      .   .|          ..|...+||+|-|.+....
T Consensus       508 ~~~~~g----------~ikdye~~tl~~c~l~~~i  532 (720)
T KOG1472|consen  508 KSPYVG----------YIKDYEGGTLMPCELLPEI  532 (720)
T ss_pred             cCcCcc----------ccccccCccccchhhccCc
Confidence            2   44          4455557799999999776

>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2

Probab=89.73  E-value=0.92  Score=41.57  Aligned_cols=58  Identities=16%  Similarity=0.169  Sum_probs=45.5

Q ss_pred             CCCCcEEEEEEeeecC-----CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 048173           60 LNLGKVVAAVIYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI  117 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~-----~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I  117 (359)
                      ...+++||-|......     .-...++|-+++||...|.|+++-.|++|+-.++...||=..
T Consensus        85 ~~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qA  147 (162)
T PF01233_consen   85 KSSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQA  147 (162)
T ss_dssp             TTTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EE
T ss_pred             CCCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceee
Confidence            3678999988754322     223779999999999999999999999999999999997443

3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....

>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish

Probab=89.25  E-value=0.79  Score=38.57  Aligned_cols=32  Identities=31%  Similarity=0.366  Sum_probs=28.8

Q ss_pred             CceeeeeEEEeccCccccChHHHHHHHHHHHH
Q 048173           78 TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL  109 (359)
Q Consensus        78 ~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l  109 (359)
                      ...+++.-|||.++.||.|+|+.|++++.+..
T Consensus        32 ~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~   63 (99)
T cd04265          32 DGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF   63 (99)
T ss_pred             CCceEEEEEEEchhhhhcChHHHHHHHHHhhC
Confidence            35789999999999999999999999888764

This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.

>KOG3524 consensus Predicted guanine nucleotide exchange factor (PEBBLE) [Signal transduction mechanisms]

Probab=89.24  E-value=0.29  Score=53.49  Aligned_cols=71  Identities=21%  Similarity=0.302  Sum_probs=53.6

Q ss_pred             CceEEEEcccCcchH-HHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc--cccCHHHHHHHHhCCCCCC
Q 048173          251 KCFRITLMNIADDSK-KVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS--WIVSPSWLKESFGEGRFVD  322 (359)
Q Consensus       251 ~~prI~fSgl~~e~k-k~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa--wIVsp~WL~eS~k~g~flD  322 (359)
                      .+...+|||+-+... .-.++..+||.|..| ..++||+|+....-+ |+-.|+.  .++.|+||.++-+...|++
T Consensus       120 ~~vvlcfTg~rkk~e~lv~lvh~mgg~irkd~nsktthli~n~s~ge-k~~~a~t~~~~~rp~wv~~aw~~rn~~y  194 (850)
T KOG3524|consen  120 KDVVMCFTGERKKKEELVDLVHYMGGSIRKDTNSKTTHLIANKVEGE-KQSIALVGVPTMRPDWVTEAWKHRNDSY  194 (850)
T ss_pred             cCceeeeeccchhhHHHHHHHHHhcceeEeeeccCceEEEeecccce-EEEEEeeccceechHhhhhhhcCcchhh
Confidence            345677999977432 236778999999988 899999999865443 4444444  9999999999988887753

>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch

Probab=89.12  E-value=1.2  Score=38.95  Aligned_cols=76  Identities=18%  Similarity=0.103  Sum_probs=47.1

Q ss_pred             ceeeccCCCCcEEEEEE-----eeecCCCCceee------eeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec
Q 048173           54 YKVVSFLNLGKVVAAVI-----YQIVPADTQYAE------VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD  122 (359)
Q Consensus        54 ~~~~~~~~~g~IVgvi~-----l~i~~~d~~~a~------I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~  122 (359)
                      ++.+..+..|.|+|..-     |.+...++...+      |--|.|+++.||+|+|+.|.+..++   ..++.---+--+
T Consensus         9 l~d~~~~~~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~---~e~~~p~~~a~D   85 (120)
T PF05301_consen    9 LKDSEAGGKGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQ---EENVSPHQLAID   85 (120)
T ss_pred             EEecCCCCCceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHH---HcCCCcccceec
Confidence            55555567777887653     334444443333      4457899999999999999988765   445443333333


Q ss_pred             cc---cHHHHhhc
Q 048173          123 KE---SSFFFLKQ  132 (359)
Q Consensus       123 ~~---A~~Fw~K~  132 (359)
                      .-   -.+|..|.
T Consensus        86 rPS~Kll~Fl~Kh   98 (120)
T PF05301_consen   86 RPSPKLLSFLKKH   98 (120)
T ss_pred             CCcHHHHHHHHHh
Confidence            32   34566665

Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity

>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase

Probab=88.61  E-value=0.42  Score=38.08  Aligned_cols=27  Identities=22%  Similarity=0.231  Sum_probs=24.3

Q ss_pred             eeEEEeccCccccChHHHHHHHHHHHH
Q 048173           83 VPLAAVSSIYQHKGVGRLLYLKLRKRL  109 (359)
Q Consensus        83 I~~~AV~~~~QgkGIG~~Lv~~l~~~l  109 (359)
                      |..+-|++.+|++||++.|++.+.+..
T Consensus         8 I~RIWV~~~~RR~GIAt~Lld~ar~~~   34 (70)
T PF13880_consen    8 ISRIWVSPSHRRKGIATRLLDAARENF   34 (70)
T ss_pred             eEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence            788899999999999999999988754

>COG3375 Uncharacterized conserved protein [Function unknown]

Probab=88.29  E-value=2.1  Score=41.57  Aligned_cols=87  Identities=20%  Similarity=0.230  Sum_probs=64.0

Q ss_pred             cCCCCcEEEEEEeeecCCCCc-eeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-----ccHHHHhhc
Q 048173           59 FLNLGKVVAAVIYQIVPADTQ-YAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-----ESSFFFLKQ  132 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~-~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-----~A~~Fw~K~  132 (359)
                      +..||++||...+....-.+. |-+=..++|.|++++.|+|-.|=..=.+.+.+.|+. .+.|++.     +|.-=+.|+
T Consensus        52 f~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~t-li~WTfDPl~alNA~fNi~KL  130 (266)
T COG3375          52 FSADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYT-LIAWTFDPLNALNARFNISKL  130 (266)
T ss_pred             EcCCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCee-eEEEecccchhhhhhcchhhh
Confidence            346669999999766332333 666778899999999999999999999999999995 5567776     344456677


Q ss_pred             ccCcEEEEeecc-cCcc
Q 048173          133 VQDFASVAEVDT-EGRA  148 (359)
Q Consensus       133 ~~GF~~~~e~~~-~g~~  148 (359)
                        |=....-.+. .|++
T Consensus       131 --Ga~artYi~nfYg~m  145 (266)
T COG3375         131 --GAIARTYIKNFYGEM  145 (266)
T ss_pred             --ceeEEEeeccccchh
Confidence              7665555444 4433

>KOG3524 consensus Predicted guanine nucleotide exchange factor (PEBBLE) [Signal transduction mechanisms]

Probab=88.22  E-value=0.29  Score=53.58  Aligned_cols=96  Identities=18%  Similarity=0.187  Sum_probs=72.6

Q ss_pred             cccceeecccCCCCCceEEEEcccCcchH--HHHHHHhcCcEEecCCCCeeEEEeCCCCCcHHHHhhcc--cccCHHHHH
Q 048173          237 TSVVFVSKEFQPNGKCFRITLMNIADDSK--KVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS--WIVSPSWLK  312 (359)
Q Consensus       237 ~k~~~i~~~~~~~~~~prI~fSgl~~e~k--k~klik~LGG~V~~d~~~~THLVa~~~~RT~KfL~AIa--wIVsp~WL~  312 (359)
                      .-.+-..++....-..-.+.|-|+.++..  .....+.-||....+.+.|||||.+.-+-+.+-+.--.  .+|..+|..
T Consensus       198 ~~~~f~d~hrl~~feg~~~~f~gF~~ee~~~m~~sle~~gg~~a~~d~~cthvvv~e~~~~~~p~~~s~~~~~vk~ewfw  277 (850)
T KOG3524|consen  198 MEPCFVDKHRLGVFEGLSLFFHGFKQEEIDDMLRSLENTGGKLAPSDTLCTHVVVNEDNDEVEPLAVSSNQVHVKKEWFW  277 (850)
T ss_pred             hccchhhhhccccccCCeEeecCCcHHHHHHHHHHHHhcCCcccCCCCCceeEeecCCccccccccccccceeecccceE
Confidence            33334555666666777888999988522  23456778999999999999999997655544443323  999999999


Q ss_pred             HHHhCCCCCCCCcceecCcc
Q 048173          313 ESFGEGRFVDESFYMLNDDG  332 (359)
Q Consensus       313 eS~k~g~flDEe~Y~L~D~e  332 (359)
                      =+...|+|.-|..|.+.+-.
T Consensus       278 ~siq~g~~a~e~~yl~~~~~  297 (850)
T KOG3524|consen  278 VSIQRGCCAIEDNYLLPTGK  297 (850)
T ss_pred             EEEecchhccccceeccccc
Confidence            99999999999999988763

>COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]

Probab=87.78  E-value=0.47  Score=49.25  Aligned_cols=64  Identities=16%  Similarity=0.239  Sum_probs=47.4

Q ss_pred             hHHHHHHHhcCcEEecC------------CCCeeEEEeCCCCCcHHHHhhcccccCHHHHHHHHhCCCCCCCCcceec
Q 048173          264 SKKVHLTKNLRGAVTSD------------GITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLN  329 (359)
Q Consensus       264 ~kk~klik~LGG~V~~d------------~~~~THLVa~~~~RT~KfL~AIawIVsp~WL~eS~k~g~flDEe~Y~L~  329 (359)
                      ....=+|.++||.|..+            .+.+||-|++++.-.-|+--.  --+.|+||.||+-.|.....+.|..+
T Consensus       365 dsLefiilscGG~V~~~p~~~~i~~~~~vD~~vth~i~drp~~~~kvegr--tYiQPQw~fDsiNkG~l~~~~~Y~~G  440 (591)
T COG5163         365 DSLEFIILSCGGSVVGSPCEADIHVSEKVDEKVTHQIVDRPVMKNKVEGR--TYIQPQWLFDSINKGKLACVENYCVG  440 (591)
T ss_pred             hHHHHHHHHcCCcccCchhhccCCchhhccchhhhhhccchhhhhhhcce--eeechHHHHhhhccccchhhhhcccc
Confidence            33345678999988754            467899999887543333221  66899999999999999888888654

>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase

Probab=87.21  E-value=1.2  Score=42.44  Aligned_cols=47  Identities=13%  Similarity=0.078  Sum_probs=43.6

Q ss_pred             ChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEEeecc
Q 048173           96 GVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus        96 GIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~~  144 (359)
                      |-...|+..+.+.|++.|+.+|++.+.....++|+++  ||...+.++.
T Consensus        21 ~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~--g~~~e~~i~~   67 (266)
T TIGR03827        21 NDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEER--GYLEEAKIPG   67 (266)
T ss_pred             ccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHC--CCeEEEeccc
Confidence            5688999999999999999999999999999999999  9999888665

Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.

>KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair]

Probab=86.85  E-value=0.76  Score=51.04  Aligned_cols=60  Identities=25%  Similarity=0.376  Sum_probs=44.6

Q ss_pred             HHHHhcCcEEecC-------CCCeeEEEeCCC---CCcHHHHhhc----c-cccCHHHHHHHHhCCCCCCCCcce
Q 048173          268 HLTKNLRGAVTSD-------GITSTHVVAGKV---RKTLNFFTAL----S-WIVSPSWLKESFGEGRFVDESFYM  327 (359)
Q Consensus       268 klik~LGG~V~~d-------~~~~THLVa~~~---~RT~KfL~AI----a-wIVsp~WL~eS~k~g~flDEe~Y~  327 (359)
                      -.++.+||.++..       ....||+|+-.+   .+..+...+-    - .||+|+|+++|...+..++|+.|.
T Consensus       807 l~~k~~g~~i~~~~~~~~~~~~~~t~~v~~~i~~~h~~~~~~~~~~lt~~rkv~~~~wv~~s~~~~~~~~e~~~~  881 (881)
T KOG0966|consen  807 LKLKNFGGRITDAQSECNNIGAKYTHCVLRCIDEDHEKIKEQKKASLTIKRKVVAPSWVDHSINENCLLPEEDFP  881 (881)
T ss_pred             HHHHHhcceeeeccchhhhcccceeeeeeeecchHHHHHHHHHHHHhcccccccCHHHHHHhhcccccCccccCC
Confidence            3467889998875       556799998632   2333333332    2 899999999999999999999983

>PRK01305 arginyl-tRNA-protein transferase; Provisional

Probab=84.05  E-value=4  Score=39.47  Aligned_cols=56  Identities=16%  Similarity=0.268  Sum_probs=46.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC  119 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l  119 (359)
                      ++|++|||+..-+.+..-  .-| .++-||++-..++|+..+..-.+.|+++|.+.+.+
T Consensus       151 ~~g~LiaVav~D~l~d~l--SAV-Y~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YL  206 (240)
T PRK01305        151 GDGKLVAVAVTDVLDDGL--SAV-YTFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYL  206 (240)
T ss_pred             eCCeEEEEEEEeccCCce--eeE-EEeeCCCccccCCHHHHHHHHHHHHHHcCCCeEee
Confidence            689999999876666532  436 45569999999999999999999999999988864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	359
3sqd_A	219	Crystal Structure Of Human Ptip Brct56-Gamma H2ax C		8e-09
3l40_A	220	Crystal Structure Of S. Pombe Brc1 Brct5-Brct6 Doma		1e-05
3k05_A	200	The Crystal Structure Of Mdc1 Brct T2067d In Comple		2e-04
2ado_A	196	Crystal Structure Of The Brct Repeat Region From Th		2e-04
2etx_A	209	Crystal Structure Of Mdc1 Tandem Brct Domains Lengt		2e-04
2azm_A	207	Crystal Structure Of The Mdc1 Brct Repeat In Comple		3e-04

>pdb|3SQD|A Chain A, Crystal Structure Of Human Ptip Brct56-Gamma H2ax Complex Length = 219

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 273 LRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLN 329
           L G V       TH++A KV +T+ F TA+S    IV+P WL+E F   +F+DE  Y+L 
Sbjct: 39  LGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFIDEQNYILR 98
Query: 330 DDGYVLKYRSELKDAVLRAKARP 352
           D    + +   L++++ RA   P
Sbjct: 99  DAEAEVLFSFSLEESLKRAHVSP 121

>pdb|3L40|A Chain A, Crystal Structure Of S. Pombe Brc1 Brct5-Brct6 Domains Length = 220

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 271 KNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSW---IVSPSWLKESFGEGRFVDESFYM 327
           K L  ++TS+    TH++A ++ +T  F  ++ +   +V+  W+         VDE  Y+
Sbjct: 26  KKLDMSITSNPSKCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEPYL 85
Query: 328 LNDDGYVLKYRSELKDAVLRAKARPGGLLK 357
           LND    L+    L+ A+ RA+A+   LL+
Sbjct: 86  LNDPEKELELGCTLESALKRARAQGPSLLE 115

>pdb|3K05|A Chain A, The Crystal Structure Of Mdc1 Brct T2067d In Complex With A Minimal Recognition Tetrapeptide With An Amidated C-Terminus Length = 200

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 263 DSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSW---IVSPSWLKESFGEGR 319
           D++       L G++      ++H+V  ++R+T+ F  AL     I+S  WL +S   G 
Sbjct: 13  DARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGF 72
Query: 320 FVDESFYMLNDDGYVLKYRSELKDAVLRAKAR 351
           F+    Y++ D      +   L+DA+ RA+ R
Sbjct: 73  FLPPDEYVVTDPEQEKNFGFSLQDALSRARER 104

>pdb|2ADO|A Chain A, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna Damage Checkpoint Protein 1, Mdc1 Length = 196

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 263 DSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSW---IVSPSWLKESFGEGR 319
           D++       L G++      ++H+V  ++R+T+ F  AL     I+S  WL +S   G 
Sbjct: 12  DARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGF 71
Query: 320 FVDESFYMLNDDGYVLKYRSELKDAVLRAKAR 351
           F+    Y++ D      +   L+DA+ RA+ R
Sbjct: 72  FLPPDEYVVTDPEQEKNFGFSLQDALSRARER 103

>pdb|2ETX|A Chain A, Crystal Structure Of Mdc1 Tandem Brct Domains Length = 209

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 263 DSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSW---IVSPSWLKESFGEGR 319
           D++       L G++      ++H+V  ++R+T+ F  AL     I+S  WL +S   G 
Sbjct: 22  DARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGF 81
Query: 320 FVDESFYMLNDDGYVLKYRSELKDAVLRAKAR 351
           F+    Y++ D      +   L+DA+ RA+ R
Sbjct: 82  FLPPDEYVVTDPEQEKNFGFSLQDALSRARER 113

>pdb|2AZM|A Chain A, Crystal Structure Of The Mdc1 Brct Repeat In Complex With The Histone Tail Of Gamma-H2ax Length = 207

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 263 DSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSW---IVSPSWLKESFGEGR 319
           D++       L G++      ++H+V  ++R+T+ F  AL     I+S  WL +S   G 
Sbjct: 20  DARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGF 79
Query: 320 FVDESFYMLNDDGYVLKYRSELKDAVLRAKAR 351
           F+    Y++ D      +   L+DA+ RA+ R
Sbjct: 80  FLPPDEYVVTDPEQEKNFGFSLQDALSRARER 111

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	359
3l41_A	220	BRCT-containing protein 1; BRC1, BRCT domain, tand	5e-21
3sqd_A	219	PAX-interacting protein 1; tandem BRCT domains, ce	3e-18
2etx_A	209	Mediator of DNA damage checkpoint protein 1; tande	2e-16
1z4r_A	168	General control of amino acid synthesis protein 5-	4e-13
1ygh_A	164	ADA4, protein (transcriptional activator GCN5); tr	2e-12
3al2_A	235	DNA topoisomerase 2-binding protein 1; BRCT domain	2e-12
1qst_A	160	TGCN5 histone acetyl transferase; GCN5-related N-a	6e-12
3u3z_A	199	Microcephalin; DNA repair, cell cycle regulation,	4e-10
1t15_A	214	Breast cancer type 1 susceptibility protein; prote	2e-09
1l0b_A	229	BRCA1; TANDEM-BRCT, three-helix bundle, unknown fu	5e-09
2nte_A	210	BARD-1, BRCA1-associated ring domain protein 1; BR	1e-08
1wf6_A	132	Similar to S.pombe -RAD4+/CUT5+product (A40727); B	1e-07
1kzy_C	259	Tumor suppressor P53-binding protein 1; tandem-BRC	2e-07
3e0k_A	150	Amino-acid acetyltransferase; N-acetylglutamate sy	3e-06
2d8m_A	129	DNA-repair protein XRCC1; parallel beta-sheet, DNA	1e-05
2vxb_A	241	DNA repair protein RHP9; BRCT, nucleus, cell cycle	2e-05
3l3e_A	107	DNA topoisomerase 2-binding protein 1; BRCT domain	2e-05
1mk4_A	157	Hypothetical protein YQJY; alpha-beta-alpha sandwi	3e-05
3ii6_X	263	DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alter	6e-05
3olc_X	298	DNA topoisomerase 2-binding protein 1; BRCT domain	8e-05
2r7h_A	177	Putative D-alanine N-acetyltransferase of GNAT FA;	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
3l46_A	112	Protein ECT2; alternative splicing, guanine-nucleo	2e-04
3pc6_A	104	DNA repair protein XRCC1; BRCT domain, protein:pro	2e-04
2jw5_A	106	DNA polymerase lambda; BRCT domain, family X polym	5e-04

>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A* Length = 220

 Score = 89.2 bits (221), Expect = 5e-21
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 254 RITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSW 310
            IT           +L K L  ++TS+    TH++A ++ +T  F  ++     +V+  W
Sbjct: 10  YITFTGYDKKPSIDNLKK-LDMSITSNPSKCTHLIAPRILRTSKFLCSIPYGPCVVTMDW 68

Query: 311 LKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLK 357
           +         VDE  Y+LND    L+    L+ A+ RA+A+   LL+
Sbjct: 69  INSCLKTHEIVDEEPYLLNDPEKELELGCTLESALKRARAQGPSLLE 115

>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens} Length = 219

 Score = 81.5 bits (201), Expect = 3e-18
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 254 RITLMNIADDSKK--VHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSP 308
            +          +  +     L G V       TH++A KV +T+ F TA+S    IV+P
Sbjct: 18  FVLFTGFEPVQVQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTP 77

Query: 309 SWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARP 352
            WL+E F   +F+DE  Y+L D    + +   L++++ RA   P
Sbjct: 78  EWLEECFRCQKFIDEQNYILRDAEAEVLFSFSLEESLKRAHVSP 121

>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A Length = 209

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 247 QPNGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS--- 303
                  ++    + D   +  +   L G++      ++H+V  ++R+T+ F  AL    
Sbjct: 7   NQESTAPKVLFTGVVDARGERAVLA-LGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGI 65

Query: 304 WIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAK 349
            I+S  WL +S   G F+    Y++ D      +   L+DA+ RA+
Sbjct: 66  PILSLDWLHQSRKAGFFLPPDEYVVTDPEQEKNFGFSLQDALSRAR 111

>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168

 Score = 65.7 bits (160), Expect = 4e-13
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD 122
           G+V+  + +++ P    + E+   AV+S  Q KG G  L   L++      I     + D
Sbjct: 63  GRVIGGICFRMFPTQ-GFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYAD 121

Query: 123 KESSFFFLKQVQDFASVAEVDTEGRAGR 150
           + +  +F K  Q F+   +V      G 
Sbjct: 122 EYAIGYFKK--QGFSKDIKVPKSRYLGY 147

>1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 Length = 164

 Score = 63.7 bits (155), Expect = 2e-12
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWD 121
             VV  + Y+      ++AE+   A+SS  Q +G G  L   L+  +++   I+    + 
Sbjct: 57  LTVVGGITYRPFD-KREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYA 115

Query: 122 DKESSFFFLKQVQDFASVAEVDTEGRAGRL 151
           D  +  +F K  Q F     +D     G +
Sbjct: 116 DNYAIGYFKK--QGFTKEITLDKSIWMGYI 143

>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A* Length = 235

 Score = 65.2 bits (158), Expect = 2e-12
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 251 KCFRITLMNIADDSKK--VHLTKNLRGAVTSDGITS---THVVAGKVRKTLNFFTALS-- 303
           K +   L ++    +    HL + L G V          TH+V G   +   +  +++  
Sbjct: 8   KQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAG 67

Query: 304 -WIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKA 350
            W++  S+L+     G FV E  Y       +             A A
Sbjct: 68  KWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALA 115

>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160

 Score = 62.2 bits (151), Expect = 6e-12
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD 122
            KV+  + ++      ++AEV   AV++  Q +G G  L  K +  +Q   I  +  + D
Sbjct: 56  QKVIGGICFRQYK-PQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYAD 114

Query: 123 KESSFFFLKQ 132
             +  +F KQ
Sbjct: 115 NFAIGYFKKQ 124

>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A* Length = 199

 Score = 57.8 bits (139), Expect = 4e-10
 Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 251 KCFRITLMNIADDSKKVHLTK---NLRGAVTSDGITS--THVVAGKVRKTLNFFTALS-- 303
           K  R  +M      K+  + +    L+G   +  +    THV++GK  +TLN    ++  
Sbjct: 9   KPTRTLVMTSMPSEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARG 68

Query: 304 -WIVSPSWLKESFGEGRFVDESFYMLNDDGY 333
            W++S  W+  S   G ++ E  + L+    
Sbjct: 69  CWVLSYDWVLWSLELGHWISEEPFELSHHFP 99

>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A Length = 214

 Score = 56.3 bits (135), Expect = 2e-09
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 13/93 (13%)

Query: 251 KCFRITLMNIADDSKKV--HLTKNLRGAVTSDGITS--THVVAGK-----VRKTLNFFTA 301
           K   + +  +  +   +     +     +T+  IT   THVV          +TL +F  
Sbjct: 3   KRMSMVVSGLTPEEFMLVYKFARKHHITLTNL-ITEETTHVVMKTDAEFVCERTLKYFLG 61

Query: 302 LS---WIVSPSWLKESFGEGRFVDESFYMLNDD 331
           ++   W+VS  W+ +S  E + ++E  + +  D
Sbjct: 62  IAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGD 94

>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3 Length = 229

 Score = 55.2 bits (132), Expect = 5e-09
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 251 KCFRITLMNIADDSKKV--HLTKNLRGAVTSDGITS--THVVAGK-----VRKTLNFFTA 301
           +   + +  +      +     +  R A+T   IT   THV+          +TL +F  
Sbjct: 6   RDISMVVSGLTPKEVMIVQKFAEKYRLALTDV-ITEETTHVIIKTDAEFVCERTLKYFLG 64

Query: 302 LS---WIVSPSWLKESFGEGRFVDESFYMLNDDGY 333
           ++   WIVS SW+ +S  E + +    + +  D  
Sbjct: 65  IAGGKWIVSYSWVIKSIQERKLLSVHEFEVKGDVV 99

>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A Length = 210

 Score = 53.6 bits (128), Expect = 1e-08
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 9/79 (11%)

Query: 262 DDSKKVHLTKNLR--GAVTSDGITS--THVVA--GKVRKTLNFFTALS---WIVSPSWLK 312
              ++  L++      A       S  THVV     V+ TL     +    WI+   W+K
Sbjct: 11  SSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVK 70

Query: 313 ESFGEGRFVDESFYMLNDD 331
                     E  Y + + 
Sbjct: 71  ACLRRKVCEQEEKYEIPEG 89

>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5 Length = 132

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 244 KEFQPNGKCF---RITLMNIADDSKKVHLTKNLR--GAVTSDGITS--THVVAG----KV 292
             FQ         RI L   +       L + +   G V  + +    THV+ G    ++
Sbjct: 32  SAFQAPEDLLDGCRIYLCGFSGRKLD-KLRRLINSGGGVRFNQLNEDVTHVIVGDYDDEL 90

Query: 293 RKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYML 328
           ++  N       +V   WL E F +G  + E  Y+ 
Sbjct: 91  KQFWNKSAHRPHVVGAKWLLECFSKGYMLSEEPYIH 126

>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B Length = 259

 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 285 THVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLNDD 331
             ++A +  +T  +F  L+     VS  W+ +S    +  +   Y+L   
Sbjct: 89  CLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAG 138

>3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} Length = 150

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD 122
           G ++          + + AE+   A+   Y+    G LL   ++ R +S  I  IF    
Sbjct: 52  GLIIGCAALYPYSEE-RKAEMACVAIHPDYRDGNRGLLLLNYMKHRSKSENINQIFVLTT 110

Query: 123 KESSFF 128
               +F
Sbjct: 111 HSLHWF 116

>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 129

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 6/63 (9%)

Query: 275 GAVTSDGITS--THVVAGKVRKTLNFFTALSW---IVSPSWLKESFGEGRFVDESFYMLN 329
           GA      T   TH++      T  +   L     IV   W+ +     R +    Y++ 
Sbjct: 49  GAKYRPDWTRDSTHLICAFAN-TPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMA 107

Query: 330 DDG 332
             G
Sbjct: 108 GPG 110

>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A* Length = 241

 Score = 44.9 bits (105), Expect = 2e-05
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 253 FRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALSW---IVSPS 309
            R    +     +K    ++L+    S       VV+    + + +  AL++    V P 
Sbjct: 40  LRPLFNDPFKSKQKK--LRHLKPQKRSKSWNQAFVVSDTFSRKVKYLEALAFNIPCVHPQ 97

Query: 310 WLKESFGEGRFVDESFYML 328
           ++K+     R VD S Y+L
Sbjct: 98  FIKQCLKMNRVVDFSPYLL 116

>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 Length = 157

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 9/57 (15%), Positives = 23/57 (40%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC 119
             +   +I     +D + A +  + V   ++   +G+ LY    + ++  G   + C
Sbjct: 51  NSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKC 107

>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A* Length = 263

 Score = 43.0 bits (100), Expect = 6e-05
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 9/79 (11%)

Query: 259 NIADDSKKVHLTKNLRGAVTSDGITS--THVVAGKVRKTLNFFTALS-------WIVSPS 309
           N         L     GA     +    +HV+ G+    +  F A          I+  S
Sbjct: 185 NEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKES 244

Query: 310 WLKESFGEGRFVDESFYML 328
           W+ +S  +    +E+ Y++
Sbjct: 245 WVTDSIDKCELQEENQYLI 263

>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A* Length = 298

 Score = 42.8 bits (100), Expect = 8e-05
 Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 8/112 (7%)

Query: 227 QRREDRPVSITSVVFVSKEFQPNGKCFRITLMNIADDSKKV--HLTKNLRGAVTSD--GI 282
           ++ +++ ++  + + +     P      I +  +    +K    LT    G         
Sbjct: 177 EKSQEKKITRYTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMN 236

Query: 283 TSTHVVAGKVRKTLNFFTALSW---IVSPSWLKESFGEGRFVDESFYMLNDD 331
             TH++  + +    +  A  W    V+  W  +S  +G   DES Y     
Sbjct: 237 ECTHLIVQEPK-GQKYECAKRWNVHCVTTQWFFDSIEKGFCQDESIYKTEPR 287

>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} Length = 177

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 14/58 (24%), Positives = 24/58 (41%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW 120
             +     Y   PA     ++   AV+   QH G+GR L  ++   ++  G R +F  
Sbjct: 77  DDMAGYACYGPTPATEGTYDLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLFAE 134

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 53/378 (14%), Positives = 106/378 (28%), Gaps = 101/378 (26%)

Query: 19  RSIFPEKCVLNGIL--PNELYQLYMGSIHPLIN-LC----SMYK--VVSFL--NLGKVVA 67
           +SI  ++  ++ I+   + +          L   L      M +  V   L  N   +++
Sbjct: 43  KSILSKE-EIDHIIMSKDAVSGTLR-----LFWTLLSKQEEMVQKFVEEVLRINYKFLMS 96

Query: 68  AVIYQ-IVPAD--TQYAEV--PLAAVSSIYQHKGVGRL-LYLKLRKRLQSV--------- 112
            +  +   P+     Y E    L   + ++    V RL  YLKLR+ L  +         
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156

Query: 113 ---GI-RTIF----CWDDK-ESSFFF----------------LKQVQDFASVAEVDTEGR 147
              G  +T      C   K +    F                L+ +Q      + +   R
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 148 AGRLPLRQKFRKSTEPERVVIDGCSREGAKLGGFPPSL---DTVHDSGDLATFEKVHCSN 204
           +       K R  +    +      R   K   +   L     V ++     F  + C  
Sbjct: 217 SDH-SSNIKLRIHSIQAEL------RRLLKSKPYENCLLVLLNVQNAKAWNAFN-LSCKI 268

Query: 205 -MTVGAAQIGADTGAKHCSFSQGQRREDRPVSITSVVFVSKE----FQPNGKCFRITLMN 259
            +T    Q+  D       F          +   S+     E         K       +
Sbjct: 269 LLTTRFKQV-TD-------FLSAATTTHISLDHHSMTLTPDEVKSLL---LKYLDCRPQD 317

Query: 260 IADDSKKVH-LTKNLRGAVTSDGITST----HVVAGKVRKTL-NFFTALSWIVSPSWLKE 313
           +  +    +    ++      DG+ +     HV   K+   + +    L     P+  ++
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL----EPAEYRK 373

Query: 314 SFGEGRFVDESFYMLNDD 331
            F       +   +    
Sbjct: 374 MF-------DRLSVFPPS 384

>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens} Length = 112

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 9/84 (10%)

Query: 254 RITLMNIADDSKKVHLTKNLR--GAVTSDGITS--THVVAGKVRKTLNFFTALSW---IV 306
            ++ +  +D+ K  ++ +     G           TH+V  +     +     S    +V
Sbjct: 26  ILSFLGFSDEEKT-NMEEMTEMQGGKYLPLGDERCTHLVVEEN-IVKDLPFEPSKKLYVV 83

Query: 307 SPSWLKESFGEGRFVDESFYMLND 330
              W   S        E+ Y+   
Sbjct: 84  KQEWFWGSIQMDARAGETMYLYEK 107

>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} PDB: 3pc8_A* 3qvg_B* 1cdz_A Length = 104

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 8/87 (9%)

Query: 249 NGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITS--THVVAG-----KVRKTLNFFTA 301
            GK F +      D+ +++            D +      V+          + L    +
Sbjct: 9   EGKHFFLYGEFPGDERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEALMENPS 68

Query: 302 LSWIVSPSWLKESFGEGRFVDESFYML 328
           L+  V P W+     + + +    Y +
Sbjct: 69  LA-FVRPRWIYSCNEKQKLLPHQLYGV 94

>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens} Length = 106

 Score = 38.1 bits (88), Expect = 5e-04
 Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 10/64 (15%)

Query: 275 GAVTSDGITS--THVVAGKVRKTLNFFTALS--------WIVSPSWLKESFGEGRFVDES 324
           G           TH+V  +          L          +V  +WL     E R VD +
Sbjct: 40  GGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQERRLVDVA 99

Query: 325 FYML 328
            + +
Sbjct: 100 GFSI 103

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
3l41_A	220	BRCT-containing protein 1; BRC1, BRCT domain, tand	99.92
2etx_A	209	Mediator of DNA damage checkpoint protein 1; tande	99.91
3sqd_A	219	PAX-interacting protein 1; tandem BRCT domains, ce	99.9
3al2_A	235	DNA topoisomerase 2-binding protein 1; BRCT domain	99.87
3u3z_A	199	Microcephalin; DNA repair, cell cycle regulation,	99.8
1l0b_A	229	BRCA1; TANDEM-BRCT, three-helix bundle, unknown fu	99.74
1t15_A	214	Breast cancer type 1 susceptibility protein; prote	99.73
2nte_A	210	BARD-1, BRCA1-associated ring domain protein 1; BR	99.71
3efa_A	147	Putative acetyltransferase; structural genom 2, pr	99.54
2jdc_A	146	Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.	99.54
2q0y_A	153	GCN5-related N-acetyltransferase; YP_295895.1, ace	99.53
3lod_A	162	Putative acyl-COA N-acyltransferase; structural ge	99.48
1xeb_A	150	Hypothetical protein PA0115; midwest center for st	99.47
1cjw_A	166	Protein (serotonin N-acetyltransferase); HET: COT;	99.47
3t7k_A	256	RTT107, regulator of TY1 transposition protein 107	99.46
3mgd_A	157	Predicted acetyltransferase; structural genomics,	99.45
3i3g_A	161	N-acetyltransferase; malaria, structural genomics,	99.44
2g3a_A	152	Acetyltransferase; structural genomics, PSI, prote	99.43
3gy9_A	150	GCN5-related N-acetyltransferase; YP_001815201.1,	99.43
1y9w_A	140	Acetyltransferase; structural genomics, Pro struct	99.42
3l3e_A	107	DNA topoisomerase 2-binding protein 1; BRCT domain	99.42
3l46_A	112	Protein ECT2; alternative splicing, guanine-nucleo	99.42
1u6m_A	199	Acetyltransferase, GNAT family; structural genomic	99.42
2vxb_A	241	DNA repair protein RHP9; BRCT, nucleus, cell cycle	99.4
1kux_A	207	Aralkylamine, serotonin N-acetyltransferase; enzym	99.4
2fia_A	162	Acetyltransferase; structural genomics, PSI, prote	99.4
1kzy_C	259	Tumor suppressor P53-binding protein 1; tandem-BRC	99.4
1i12_A	160	Glucosamine-phosphate N-acetyltransferase; GNAT, a	99.4
1tiq_A	180	Protease synthase and sporulation negative regulat	99.39
2r7h_A	177	Putative D-alanine N-acetyltransferase of GNAT FA;	99.38
1q2y_A	140	Protein YJCF, similar to hypothetical proteins; GC	99.38
4fd4_A	217	Arylalkylamine N-acetyltransferase like 5B; GNAT;	99.38
1qst_A	160	TGCN5 histone acetyl transferase; GCN5-related N-a	99.38
4evy_A	166	Aminoglycoside N(6')-acetyltransferase type 1; cen	99.38
1mk4_A	157	Hypothetical protein YQJY; alpha-beta-alpha sandwi	99.38
3t90_A	149	Glucose-6-phosphate acetyltransferase 1; GNAT fold	99.37
2dxq_A	150	AGR_C_4057P, acetyltransferase; structural genomic	99.37
2oh1_A	179	Acetyltransferase, GNAT family; YP_013287.1, struc	99.37
4ag7_A	165	Glucosamine-6-phosphate N-acetyltransferase; HET:	99.37
1z4e_A	153	Transcriptional regulator; nysgxrc target T2017, G	99.37
2x7b_A	168	N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf	99.37
2cou_A	109	ECT2 protein; BRCT domain, RHO GTPase, structural	99.36
1s3z_A	165	Aminoglycoside 6'-N-acetyltransferase; GNAT, amino	99.36
2d8m_A	129	DNA-repair protein XRCC1; parallel beta-sheet, DNA	99.36
2pdo_A	144	Acetyltransferase YPEA; alpha-beta-alpha sandwich,	99.36
1n71_A	180	AAC(6')-II; aminoglycoside 6'-N-acetyltransferase,	99.36
3e0k_A	150	Amino-acid acetyltransferase; N-acetylglutamate sy	99.36
3jvn_A	166	Acetyltransferase; alpha-beta protein, structural	99.35
1ghe_A	177	Acetyltransferase; acyl coenzyme A complex; HET: A	99.35
1wwz_A	159	Hypothetical protein PH1933; structural genomics,	99.35
4e0a_A	164	BH1408 protein; structural genomics, PSI-biology,	99.34
3t9y_A	150	Acetyltransferase, GNAT family; PSI-biology, struc	99.34
2cy2_A	174	TTHA1209, probable acetyltransferase; structural g	99.33
3fix_A	183	N-acetyltransferase; termoplasma acidophilum, stru	99.32
2bei_A	170	Diamine acetyltransferase 2; SSAT2, BC011751, AAH1	99.32
3d8p_A	163	Acetyltransferase of GNAT family; NP_373092.1, str	99.32
2i6c_A	160	Putative acetyltransferase; GNAT family, structura	99.32
2fiw_A	172	GCN5-related N-acetyltransferase:aminotransferase	99.31
2ae6_A	166	Acetyltransferase, GNAT family; GCN5-related N-ace	99.31
1z4r_A	168	General control of amino acid synthesis protein 5-	99.31
2o28_A	184	Glucosamine 6-phosphate N-acetyltransferase; struc	99.3
1qsm_A	152	HPA2 histone acetyltransferase; protein-acetyl coe	99.3
4id3_A	92	DNA repair protein REV1; BRCT domain, protein bind	99.29
3qb8_A	197	A654L protein; GNAT N-acetyltransferase, acetyltra	99.29
3dr6_A	174	YNCA; acetyltransferase, csgid target, essential g	99.29
3kkw_A	182	Putative uncharacterized protein; acetyltransferas	99.29
2vez_A	190	Putative glucosamine 6-phosphate acetyltransferase	99.29
1ygh_A	164	ADA4, protein (transcriptional activator GCN5); tr	99.29
2eui_A	153	Probable acetyltransferase; dimer, structural geno	99.29
3exn_A	160	Probable acetyltransferase; GCN5-related N-acetylt	99.28
3pp9_A	187	Putative streptothricin acetyltransferase; toxin p	99.28
2ozh_A	142	Hypothetical protein XCC2953; structural genomics,	99.28
1yvk_A	163	Hypothetical protein BSU33890; ALPHS-beta protein,	99.28
1bo4_A	168	Protein (serratia marcescens aminoglycoside-3-N- a	99.28
3fnc_A	163	Protein LIN0611, putative acetyltransferase; GNAT,	99.28
3dsb_A	157	Putative acetyltransferase; APC60368.2, ST genomic	99.28
2fl4_A	149	Spermine/spermidine acetyltransferase; structural	99.27
2ob0_A	170	Human MAK3 homolog; acetyltransferase, structural	99.27
3i9s_A	183	Integron cassette protein; oyster POND, woods HOLE	99.27
2ge3_A	170	Probable acetyltransferase; structural GEN PSI, pr	99.27
2atr_A	138	Acetyltransferase, GNAT family; MCSG, structural g	99.26
1y9k_A	157	IAA acetyltransferase; structural genomics, midwes	99.26
1vkc_A	158	Putative acetyl transferase; structural genomics,	99.26
3owc_A	188	Probable acetyltransferase; structural genomics, P	99.26
3s6f_A	145	Hypothetical acetyltransferase; acyl-COA N-acyltra	99.26
3eg7_A	176	Spermidine N1-acetyltransferase; structural genomi	99.26
4fd5_A	222	Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A	99.26
3fyn_A	176	Integron gene cassette protein HFX_CASS3; integron	99.25
4h89_A	173	GCN5-related N-acetyltransferase; N-acyltransferas	99.25
1ufh_A	180	YYCN protein; alpha and beta, fold, acetyltransfer	99.25
3f8k_A	160	Protein acetyltransferase; GCN5-related N-acetyltr	99.25
2fe7_A	166	Probable N-acetyltransferase; structural genomics,	99.25
1wf6_A	132	Similar to S.pombe -RAD4+/CUT5+product (A40727); B	99.24
2i79_A	172	Acetyltransferase, GNAT family; acetyl coenzyme *A	99.23
1y7r_A	133	Hypothetical protein SA2161; structural genomics,	99.23
2qec_A	204	Histone acetyltransferase HPA2 and related acetylt	99.23
1on0_A	158	YYCN protein; structural genomics, alpha-beta prot	99.23
2cnt_A	160	Modification of 30S ribosomal subunit protein S18;	99.23
3d3s_A	189	L-2,4-diaminobutyric acid acetyltransferase; alpha	99.23
1yre_A	197	Hypothetical protein PA3270; APC5563, midwest cent	99.23
3te4_A	215	GH12636P, dopamine N acetyltransferase, isoform A;	99.22
2gan_A	190	182AA long hypothetical protein; alpha-beta protei	99.22
3igr_A	184	Ribosomal-protein-S5-alanine N-acetyltransferase;	99.22
3juw_A	175	Probable GNAT-family acetyltransferase; structural	99.21
3tth_A	170	Spermidine N1-acetyltransferase; central intermedi	99.21
2aj6_A	159	Hypothetical protein MW0638; structural genomics,	99.21
1s7k_A	182	Acetyl transferase; GNAT; 1.80A {Salmonella typhim	99.21
1m4i_A	181	Aminoglycoside 2'-N-acetyltransferase; COA binding	99.21
2r1i_A	172	GCN5-related N-acetyltransferase; YP_831484.1, put	99.2
3g8w_A	169	Lactococcal prophage PS3 protein 05; APC61042, ace	99.2
2bue_A	202	AAC(6')-IB; GNAT, transferase, aminoglycoside, flu	99.2
1vhs_A	175	Similar to phosphinothricin acetyltransferase; str	99.2
2ebw_A	97	DNA repair protein REV1; A/B/A 3 layers, parallel	99.2
2q7b_A	181	Acetyltransferase, GNAT family; NP_689019.1, struc	99.2
2j8m_A	172	Acetyltransferase PA4866 from P. aeruginosa; GCN5	99.2
1yx0_A	159	Hypothetical protein YSNE; NESG, GFT structral gen	99.19
2pc1_A	201	Acetyltransferase, GNAT family; NP_688560.1, struc	99.19
2b5g_A	171	Diamine acetyltransferase 1; structural genomics,	99.18
1nsl_A	184	Probable acetyltransferase; structural genomics, h	99.18
3fbu_A	168	Acetyltransferase, GNAT family; structur genomics,	99.18
3bln_A	143	Acetyltransferase GNAT family; NP_981174.1, struct	99.17
2fck_A	181	Ribosomal-protein-serine acetyltransferase, putat;	99.17
2k5t_A	128	Uncharacterized protein YHHK; N-acetyl transferase	99.17
1yr0_A	175	AGR_C_1654P, phosphinothricin acetyltransferase; s	99.17
3h4q_A	188	Putative acetyltransferase; NP_371943.1, structura	99.17
3ec4_A	228	Putative acetyltransferase from the GNAT family; Y	99.17
3pzj_A	209	Probable acetyltransferases; MCSG, PSI-2, structur	99.16
2ree_A	224	CURA; GNAT, S-acetyltransferase, decarboxylase, po	99.16
3f5b_A	182	Aminoglycoside N(6')acetyltransferase; APC60744, l	99.15
3eo4_A	164	Uncharacterized protein MJ1062; APC60792.2,MJ_1062	99.15
2jlm_A	182	Putative phosphinothricin N-acetyltransferase; met	99.15
3ddd_A	288	Putative acetyltransferase; NP_142035.1, structura	99.14
1r57_A	102	Conserved hypothetical protein; GCN5, N-acetyltran	99.13
3r9f_A	188	MCCE protein; microcin C7, acetyltransferase, SELF	99.12
2z10_A	194	Ribosomal-protein-alanine acetyltransferase; alpha	99.12
2vi7_A	177	Acetyltransferase PA1377; GNAT, GCN5 family, N-ace	99.1
3ld2_A	197	SMU.2055, putative acetyltransferase; HET: COA; 2.	99.09
2wpx_A	339	ORF14; transferase, acetyl transferase, antibiotic	99.08
2fsr_A	195	Acetyltransferase; alpha-beta-sandwich, structural	99.07
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	99.05
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	99.05
3pa6_A	107	Microcephalin; BRCT domain, cell cycle; HET: MSE;	99.04
3olc_X	298	DNA topoisomerase 2-binding protein 1; BRCT domain	99.04
4fd7_A	238	Putative arylalkylamine N-acetyltransferase 7; GNA	99.03
3frm_A	254	Uncharacterized conserved protein; APC61048, staph	99.03
3ey5_A	181	Acetyltransferase-like, GNAT family; structural ge	99.03
2vzy_A	218	RV0802C; transferase, GCN5-related N-acetyltransfe	99.01
1p0h_A	318	Hypothetical protein RV0819; GNAT fold, acetyltran	99.0
2wpx_A	339	ORF14; transferase, acetyl transferase, antibiotic	98.99
3d2m_A	456	Putative acetylglutamate synthase; protein-COA-Glu	98.99
2g0b_A	198	FEEM; N-acyl transferase, environmental DNA, prote	98.98
3tcv_A	246	GCN5-related N-acetyltransferase; GRAM negative co	98.97
3iwg_A	276	Acetyltransferase, GNAT family; structural genomic	98.97
2qml_A	198	BH2621 protein; structural genomics, joint center	98.97
4ava_A	333	Lysine acetyltransferase; allosteric regulation, d	98.95
3c26_A	266	Putative acetyltransferase TA0821; NP_394282.1, A	98.95
2pr1_A	163	Uncharacterized N-acetyltransferase YLBP; YIBP pro	98.94
3tt2_A	330	GCN5-related N-acetyltransferase; structural genom	98.93
3pc6_A	104	DNA repair protein XRCC1; BRCT domain, protein:pro	98.92
2ozg_A	396	GCN5-related N-acetyltransferase; YP_325469.1, ace	98.87
2i00_A	406	Acetyltransferase, GNAT family; structural genomic	98.86
2d4p_A	141	Hypothetical protein TTHA1254; structural genomics	98.86
2kcw_A	147	Uncharacterized acetyltransferase YJAB; GNAT fold,	98.84
3g3s_A	249	GCN5-related N-acetyltransferase; ZP_00874857.1, a	98.82
3n7z_A	388	Acetyltransferase, GNAT family; PSI2, MCSG, struct	98.82
2hv2_A	400	Hypothetical protein; PSI, protein structure initi	98.79
3olc_X	298	DNA topoisomerase 2-binding protein 1; BRCT domain	98.78
2q04_A	211	Acetoin utilization protein; ZP_00540088.1, struct	98.75
3r1k_A	428	Enhanced intracellular surviVal protein; GNAT, ace	98.75
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	98.71
3sxn_A	422	Enhanced intracellular surviVal protein; GNAT fold	98.71
1ro5_A	201	Autoinducer synthesis protein LASI; alpha-beta-alp	98.69
1yk3_A	210	Hypothetical protein RV1347C/MT1389; acyltransfera	98.68
1sqh_A	312	Hypothetical protein CG14615-PA; structural genomi	98.66
3tt2_A	330	GCN5-related N-acetyltransferase; structural genom	98.65
2jw5_A	106	DNA polymerase lambda; BRCT domain, family X polym	98.62
2zpa_A	671	Uncharacterized protein YPFI; RNA modification enz	98.55
1xmt_A	103	Putative acetyltransferase; structural genomics, p	98.51
2ep8_A	100	Pescadillo homolog 1; A/B/A 3 layers, nucleolus, r	98.45
2ft0_A	235	TDP-fucosamine acetyltransferase; GNAT fold acetyl	98.41
3ii6_X	263	DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alter	98.4
3ii6_X	263	DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alter	98.37
1p0h_A	318	Hypothetical protein RV0819; GNAT fold, acetyltran	98.36
3p2h_A	201	AHL synthase; acyl-ACP binding, SAM binding, signa	98.27
1kzf_A	230	Acyl-homoserinelactone synthase ESAI; alpha-beta,	98.26
2coe_A	120	Deoxynucleotidyltransferase, terminal variant; BRC	98.19
1z56_C	264	DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA	98.01
1z56_C	264	DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA	97.82
3pc7_A	88	DNA ligase 3; DNA repair, BRCT domain, protein:pro	97.77
1bob_A	320	HAT1, histone acetyltransferase; histone modificat	97.74
2dun_A	133	POL MU, DNA polymerase MU; layers A/B/A, parallel	97.71
3shp_A	176	Putative acetyltransferase STHE_0691; PSI-biology,	97.64
1l0b_A	229	BRCA1; TANDEM-BRCT, three-helix bundle, unknown fu	97.61
3u3z_A	199	Microcephalin; DNA repair, cell cycle regulation,	97.59
3huf_A	325	DNA repair and telomere maintenance protein NBS1;	97.55
1t15_A	214	Breast cancer type 1 susceptibility protein; prote	97.48
2k6g_A	109	Replication factor C subunit 1; protein, BRCT, DNA	97.45
2ebu_A	112	Replication factor C subunit 1; A/B/A 3 layers, pa	97.35
1l7b_A	92	DNA ligase; BRCT, autostructure, structural genomi	97.2
2nte_A	210	BARD-1, BRCA1-associated ring domain protein 1; BR	96.99
2etx_A	209	Mediator of DNA damage checkpoint protein 1; tande	96.84
2cok_A	113	Poly [ADP-ribose] polymerase-1; BRCT domain, DNA r	96.62
1kzy_C	259	Tumor suppressor P53-binding protein 1; tandem-BRC	96.45
3dns_A	135	Ribosomal-protein-alanine acetyltransferase; N-ter	96.43
1yle_A	342	Arginine N-succinyltransferase, alpha chain; struc	96.2
2vxb_A	241	DNA repair protein RHP9; BRCT, nucleus, cell cycle	94.07
2l42_A	106	DNA-binding protein RAP1; BRCT domain, protein bin	93.06
2p0w_A	324	Histone acetyltransferase type B catalytic subuni;	92.67
3al2_A	235	DNA topoisomerase 2-binding protein 1; BRCT domain	92.47
4b14_A	385	Glycylpeptide N-tetradecanoyltransferase; malaria,	91.67
3s6g_A	460	N-acetylglutamate kinase / N-acetylglutamate SYNT;	91.17
4gns_A	290	Chitin biosynthesis protein CHS5; FN3, BRCT, tetra	90.09
4hkf_A	191	Alpha-tubulin N-acetyltransferase; tubulin acetylt	87.7
3iu1_A	383	Glycylpeptide N-tetradecanoyltransferase 1; N-myri	86.77
1iyk_A	392	Myristoyl-COA:protein N-myristoyltransferase; HET:	85.87
1iic_A	422	Peptide N-myristoyltransferase; HET: MYA; 2.20A {S	84.11
2wuu_A	421	N-myristoyltransferase; acyltransferase; HET: NHM;	83.96
1dgs_A	667	DNA ligase; AMP complex, NAD+-dependent; HET: DNA	83.55
3sqd_A	219	PAX-interacting protein 1; tandem BRCT domains, ce	83.26
4b5o_A	200	Alpha-tubulin N-acetyltransferase; microtubules, c	82.53
1rxt_A	496	Myristoyl-, glycylpeptide N-tetradecanoyltransfera	81.03
3s6k_A	467	Acetylglutamate kinase; synthase, transferase; 2.8	80.74
2owo_A	671	DNA ligase; protein-DNA complex, ligase-DNA comple	80.41
4h6u_A	200	Alpha-tubulin N-acetyltransferase; tubulin acetylt	80.22

>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*

Probab=99.92  E-value=4e-26  Score=211.04  Aligned_cols=110  Identities=26%  Similarity=0.410  Sum_probs=102.2

Q ss_pred             CCCceEEEEcccCcchHHHHHHHhcCcEEecCCCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCCCc
Q 048173          249 NGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESF  325 (359)
Q Consensus       249 ~~~~prI~fSgl~~e~kk~klik~LGG~V~~d~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDEe~  325 (359)
                      ..++++|+|||+.+.+. .+++++|||.++++.++||||||+++.||+|||+|++   |||+|+||.+|+++|+|+||++
T Consensus         5 ~~~~~~v~fSG~~~~~~-~~~i~~lGg~v~~~~~~~THlV~~~~~RT~K~l~Aia~g~~IVs~~Wl~~~~~~~~~l~e~~   83 (220)
T 3l41_A            5 ASKRVYITFTGYDKKPS-IDNLKKLDMSITSNPSKCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEP   83 (220)
T ss_dssp             --CCEEEEECSCSSCCC-CGGGGGGTEEECSCTTTCSEEECSSCCCBHHHHHHGGGCCEEECHHHHHHHHHHTSCCCSGG
T ss_pred             ccceEEEEEeccCCCCC-cchHhhcceeeccCchhhhhhhhhhHhhhcceeecCCCCCeEEEhHHHHhhhhhhhccccCc
Confidence            35679999999999654 6789999999999988999999999999999999999   9999999999999999999999


Q ss_pred             ceecCcccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173          326 YMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       326 Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                      |+|.|+++|.+|+|+|.+++.||++++++||+|+
T Consensus        84 y~l~d~~~e~~~~~~l~~~~~rar~~~~~LF~G~  117 (220)
T 3l41_A           84 YLLNDPEKELELGCTLESALKRARAQGPSLLEDY  117 (220)
T ss_dssp             GBCCCHHHHHHHTSCHHHHHHHHHHHCSCTTTTS
T ss_pred             cccCCcHHHhhccccHHHHHHHHHhcCchhhhhe
Confidence            9999999999999999999999998777899996

>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A

Probab=99.91  E-value=1.3e-24  Score=197.24  Aligned_cols=110  Identities=25%  Similarity=0.426  Sum_probs=99.2

Q ss_pred             CCCCCceEEEEcccCcchHHHHHHHhcCcEEecCCCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCC
Q 048173          247 QPNGKCFRITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       247 ~~~~~~prI~fSgl~~e~kk~klik~LGG~V~~d~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDE  323 (359)
                      ....++++|+|||+.+++ ..++++.|||.++++.++||||||+.+.||+||++|++   |||+|+||.+|+++|+++||
T Consensus         7 ~~~~~~~~v~~sG~~~~~-~~~~i~~lGg~~~~~~~~~THlI~~~~~rt~K~l~a~~~g~~IV~~~Wl~~~~~~~~~l~e   85 (209)
T 2etx_A            7 NQESTAPKVLFTGVVDAR-GERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGFFLPP   85 (209)
T ss_dssp             -----CCEEEECSSCCHH-HHHHHHHTTCEECSSTTTCSEEECSSCCCSHHHHHHHHHTCCEECTHHHHHHHHHTSCCCS
T ss_pred             cccCCCcEEEEeCCCcHH-HHHHHHHCCCEEeCCCCCceEEEECCCCCCHHHHHHHhcCCccccHHHHHHHHHcCCCCCh
Confidence            345678999999999854 46889999999999977899999999999999999999   99999999999999999999


Q ss_pred             CcceecCcccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173          324 SFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       324 e~Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                      ++|+|.|++.+.+|++++++++.+|++++  ||+|+
T Consensus        86 ~~y~~~~~~~~~~~~~~l~~~~~~a~~~~--lF~g~  119 (209)
T 2etx_A           86 DEYVVTDPEQEKNFGFSLQDALSRARERR--LLEGY  119 (209)
T ss_dssp             GGGBCCCHHHHHHTTCCHHHHHHHHHHSC--TTTTC
T ss_pred             hhccccChhhhhhcCCCHHHHHhhhhhCC--CcCCc
Confidence            99999999999999999999999999965  99996

>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}

Probab=99.90  E-value=3.5e-24  Score=197.27  Aligned_cols=110  Identities=29%  Similarity=0.455  Sum_probs=101.8

Q ss_pred             CCCCceEEEEcccCcchH--HHHHHHhcCcEEecCCCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCC
Q 048173          248 PNGKCFRITLMNIADDSK--KVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVD  322 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e~k--k~klik~LGG~V~~d~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flD  322 (359)
                      .+...++|+|||+.+.++  ..++++.|||.++++..+|||||++.+.||.||++|++   |||+|+||.+|+++|+++|
T Consensus        12 ~~~~~~~i~~SG~~~~~~~~l~~~i~~lGg~v~~~~~~~THLI~~~~~rT~K~l~A~~~g~~IVs~~Wl~~c~~~~~~l~   91 (219)
T 3sqd_A           12 TPELTPFVLFTGFEPVQVQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFID   91 (219)
T ss_dssp             CGGGCCEEEECSCCHHHHHHHHHHHHHTTCEECSSGGGCSEEECSSCCCCHHHHHHTTTCSEEECHHHHHHHHHHTSCCC
T ss_pred             CCCCCeEEEEeCCChHHHHHHHHHHHHCCCEEeCCCCCceEEEECCCCCCHHHHHHHHcCCCEecHHHHHHHHHcCCCCC
Confidence            567789999999988643  34788999999999989999999999999999999999   9999999999999999999


Q ss_pred             CCcceecCcccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173          323 ESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       323 Ee~Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                      |++|+|.|+++|.+|+|++++++.||++.|  ||+|+
T Consensus        92 e~~y~l~d~~~e~~~~~~l~~~l~ra~~~~--LF~G~  126 (219)
T 3sqd_A           92 EQNYILRDAEAEVLFSFSLEESLKRAHVSP--LFKAK  126 (219)
T ss_dssp             SGGGBCCCHHHHHHTTCCHHHHHHHHHHSC--TTTTE
T ss_pred             hHhccCCCchhhhhcCCChHHHhhhhcccc--ccCCc
Confidence            999999999999999999999999999855  99995

>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*

Probab=99.87  E-value=2e-22  Score=187.50  Aligned_cols=112  Identities=22%  Similarity=0.383  Sum_probs=90.8

Q ss_pred             CCCCceEEEEcccCcchH--HHHHHHhcCcEEecC---CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCC
Q 048173          248 PNGKCFRITLMNIADDSK--KVHLTKNLRGAVTSD---GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGR  319 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e~k--k~klik~LGG~V~~d---~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~  319 (359)
                      ...+.++|+|||+.++++  ..+++++|||.++++   +++||||||+.+.||+|||+||+   |||+++||.+|.++|+
T Consensus         5 ~~~~~~~~~~Sg~~~~~~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~~~RT~K~l~aia~G~wIvs~~wl~~s~~~g~   84 (235)
T 3al2_A            5 SLKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTAGH   84 (235)
T ss_dssp             ---CCCEEEEESCCHHHHHHHHHHHHHTTCEECCSSSCCTTCCEEEESSCCCSHHHHHHHHTTCEEECTHHHHHHHHHTS
T ss_pred             cCCCCEEEEEcCCCHHHHHHHHHHHHHcCCEEeccCCCCCCCcEEEECCCCCCHHHHHHHHcCCcCccHHHHHHHHHcCC
Confidence            456789999999997533  247889999999863   58999999999999999999999   9999999999999999


Q ss_pred             CCCCCcceecCcccc---cccCCC---HHHHHHHHHh----CC-----CCCCCCC
Q 048173          320 FVDESFYMLNDDGYV---LKYRSE---LKDAVLRAKA----RP-----GGLLKRI  359 (359)
Q Consensus       320 flDEe~Y~L~D~e~E---~k~~f~---L~~sL~rAr~----rp-----~~LF~Gy  359 (359)
                      |+||++|+|.|++.+   ..++++   |..+..|+|.    ++     .+||+||
T Consensus        85 ~l~E~~ye~~~~~~~d~~~~~~~~~~~l~~a~~r~R~~l~~~~~~g~~~~lF~g~  139 (235)
T 3al2_A           85 FVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGIVEGAFSGW  139 (235)
T ss_dssp             CCCSGGGBTTSHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHTTTCCSSTTTTC
T ss_pred             CCChhceeecCcchhccccCCChhhhHHHHHHHHHHHHHHhcccccccCCCCCCc
Confidence            999999999999865   345554   5566665553    11     3699996

>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*

Probab=99.80  E-value=3.6e-20  Score=167.87  Aligned_cols=107  Identities=21%  Similarity=0.392  Sum_probs=86.0

Q ss_pred             CceEEEEcccCcchHH--HHHHHhcCc-EEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCC
Q 048173          251 KCFRITLMNIADDSKK--VHLTKNLRG-AVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       251 ~~prI~fSgl~~e~kk--~klik~LGG-~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDE  323 (359)
                      ....+++||++++++.  .++++.||| .++++ .+.|||||++.+.||+|++.|++   |||+|+||.+|+++|+|+||
T Consensus        10 ~~~~~~~sgl~~~~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~~rT~K~l~ai~~g~~Iv~~~Wv~~~~~~g~~l~e   89 (199)
T 3u3z_A           10 PTRTLVMTSMPSEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWVLSYDWVLWSLELGHWISE   89 (199)
T ss_dssp             CCCEEEEESCCHHHHHHHHHHHHHHCSCEEESSCCTTEEEEEESSCCCBHHHHHHHHTTCEEEETHHHHHHHHHTSCCCS
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHHcCCcEEecCCCCCCeEEEECCCCCCHHHHHHHHCCCcEEeHHHHHHHhhCCCCCCh
Confidence            3467888999987543  478899988 56566 67899999999999999999999   99999999999999999999


Q ss_pred             CcceecCcccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173          324 SFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       324 e~Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                      ++|+|.|+..+.. .+++..+ .+|++++..||+|+
T Consensus        90 ~~y~~~~~~~~~~-~~rl~r~-~~~~~~~~~LF~g~  123 (199)
T 3u3z_A           90 EPFELSHHFPAAP-LCRSECH-LSAGPYRGTLFADQ  123 (199)
T ss_dssp             GGGBCTTTCTHHH-HHHHHHH-HCSSSCCCCTTTTS
T ss_pred             hhccccCCccccc-cchhhhh-hhcccccchhhCCC
Confidence            9999999876554 2344333 23344456799985

>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3

Probab=99.74  E-value=1.7e-18  Score=156.90  Aligned_cols=106  Identities=19%  Similarity=0.328  Sum_probs=84.5

Q ss_pred             CCceEEEEcccCcchH--HHHHHHhcCcEEecC-CCCeeEEEeCCC-----CCcHHHHhhcc---cccCHHHHHHHHhCC
Q 048173          250 GKCFRITLMNIADDSK--KVHLTKNLRGAVTSD-GITSTHVVAGKV-----RKTLNFFTALS---WIVSPSWLKESFGEG  318 (359)
Q Consensus       250 ~~~prI~fSgl~~e~k--k~klik~LGG~V~~d-~~~~THLVa~~~-----~RT~KfL~AIa---wIVsp~WL~eS~k~g  318 (359)
                      .+++.|++||+.++++  ..++++.+||.++.+ .+.|||||++..     +||+||+.|++   |||+++||.+|+++|
T Consensus         5 ~~~~~i~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~Wl~~~~~~~   84 (229)
T 1l0b_A            5 ERDISMVVSGLTPKEVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYSWVIKSIQER   84 (229)
T ss_dssp             CCCCEEEEESCCHHHHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETHHHHHHHTTT
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHHHHHHHHHCC
Confidence            4578999999998643  247889999999988 688999999987     89999999999   999999999999999


Q ss_pred             CCCCCCcceecCcccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173          319 RFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       319 ~flDEe~Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                      +++||++|++.+...+.. ...   .-.++|.++..||+|+
T Consensus        85 ~~~~e~~y~~~~~~~~~~-~~~---~~~~~r~~~~~lF~g~  121 (229)
T 1l0b_A           85 KLLSVHEFEVKGDVVTGS-NHQ---GPRRSRESQEKLFEGL  121 (229)
T ss_dssp             SCCCSGGGBCCEETTTCS-SSC---HHHHHHHHC--CCTTC
T ss_pred             CcCChHHeEecccccccc-ccc---cchhhhhhhhhhhcCc
Confidence            999999999997665432 111   1234444446799986

>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A

Probab=99.73  E-value=3.4e-18  Score=152.60  Aligned_cols=105  Identities=18%  Similarity=0.330  Sum_probs=85.0

Q ss_pred             CceEEEEcccCcchHH--HHHHHhcCcEEecC-CCCeeEEEeCCC-----CCcHHHHhhcc---cccCHHHHHHHHhCCC
Q 048173          251 KCFRITLMNIADDSKK--VHLTKNLRGAVTSD-GITSTHVVAGKV-----RKTLNFFTALS---WIVSPSWLKESFGEGR  319 (359)
Q Consensus       251 ~~prI~fSgl~~e~kk--~klik~LGG~V~~d-~~~~THLVa~~~-----~RT~KfL~AIa---wIVsp~WL~eS~k~g~  319 (359)
                      +...|++||+.++.+.  .++++.+||.++.+ ...|||||++..     +||+|++.|++   |||+|+||.+|+++|+
T Consensus         3 ~~~~~~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~Wl~~~~~~~~   82 (214)
T 1t15_A            3 KRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERK   82 (214)
T ss_dssp             -CCEEEEESCCHHHHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHHHHTTS
T ss_pred             CcEEEEECCCCHHHHHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHHHHHHHHHCCC
Confidence            5678999999875432  47889999999988 688999999987     89999999998   9999999999999999


Q ss_pred             CCCCCcceecCcccccccCCCHHHHHHHHHh-CCCCCCCCC
Q 048173          320 FVDESFYMLNDDGYVLKYRSELKDAVLRAKA-RPGGLLKRI  359 (359)
Q Consensus       320 flDEe~Y~L~D~e~E~k~~f~L~~sL~rAr~-rp~~LF~Gy  359 (359)
                      ++||++|++.++..+..    ......+++. .+.+||+|+
T Consensus        83 ~~~e~~y~~~~~~~~~~----~~~~~~~~r~~~~~~lF~g~  119 (214)
T 1t15_A           83 MLNEHDFEVRGDVVNGR----NHQGPKRARESQDRKIFRGL  119 (214)
T ss_dssp             CCCGGGGBCCEETTTBT----TCCHHHHHHTCTTSCTTTTC
T ss_pred             cCChHHeEeeccccccc----cccchhhHhhcCCCcccCCC
Confidence            99999999998765432    1223345553 235799985

>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A

Probab=99.71  E-value=1.8e-17  Score=149.38  Aligned_cols=99  Identities=18%  Similarity=0.261  Sum_probs=80.4

Q ss_pred             ceEEEEcccCcchH--HHHHHHhcCcEEecC-CCCeeEEEeCC--CCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCC
Q 048173          252 CFRITLMNIADDSK--KVHLTKNLRGAVTSD-GITSTHVVAGK--VRKTLNFFTALS---WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       252 ~prI~fSgl~~e~k--k~klik~LGG~V~~d-~~~~THLVa~~--~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDE  323 (359)
                      ++.|++||+.++++  ..++++.|||.++++ .+.|||||++.  ..||+|++.|++   |||+++||.+|+++|+++||
T Consensus         2 ~~vi~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~~~~~~e   81 (210)
T 2nte_A            2 PLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQE   81 (210)
T ss_dssp             CCEEEESSCCHHHHHHHHHHHHHTTCEEESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHHHHHHHHHTSCCCG
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHcCCEEeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHHHHHHHHcCCcCCh
Confidence            46899999988543  247889999999988 67999999987  799999999999   99999999999999999999


Q ss_pred             CcceecCcccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173          324 SFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       324 e~Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                      ++|+|.|..        .+..+.+.+ ....||+|+
T Consensus        82 ~~y~~~~~~--------~~~r~~~~~-~~~~lF~g~  108 (210)
T 2nte_A           82 EKYEIPEGP--------RRSRLNREQ-LLPKLFDGC  108 (210)
T ss_dssp             GGTBCTTHH--------HHHHHHHHT-TCCCTTTTC
T ss_pred             hhccCCCCC--------hhhhhcccc-ccccccCce
Confidence            999998631        122233332 224699986

>3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1}

Probab=99.54  E-value=2.7e-14  Score=116.41  Aligned_cols=88  Identities=11%  Similarity=0.055  Sum_probs=76.1

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.+....  ...++|..++|+|+|||+|+|+.|++++++.+++.|++.+.+.++..|..||+|+  ||+..+
T Consensus        54 ~~~~ivG~~~~~~~~--~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~--Gf~~~~  129 (147)
T 3efa_A           54 QPDLPITTLRLEPQA--DHVMRFGRVCTRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELC--GYRVTA  129 (147)
T ss_dssp             ETTEEEEEEEEEECS--TTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHT--TCEEEE
T ss_pred             CCCeEEEEEEEEeCC--CCeEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeccHHHHHHHHHc--CCcccC
Confidence            689999999976653  3669999999999999999999999999999999999999999998999999999  999998


Q ss_pred             eecccCcccCcc
Q 048173          141 EVDTEGRAGRLP  152 (359)
Q Consensus       141 e~~~~g~~~~~~  152 (359)
                      +.-....+.++.
T Consensus       130 ~~~~~~g~~~~~  141 (147)
T 3efa_A          130 GPYDEDGAPVVI  141 (147)
T ss_dssp             CCCCBTTBCEEE
T ss_pred             CcccCCCcceEE
Confidence            654432234444

>2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A*

Probab=99.54  E-value=4.6e-14  Score=115.25  Aligned_cols=91  Identities=15%  Similarity=0.195  Sum_probs=77.9

Q ss_pred             CCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G  135 (359)
                      .++|++||.+.+...+.    +...++|..++|+|+|||+|+|+.|++++++.+++.|++.+.+.++..|..||+|+  |
T Consensus        45 ~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~--G  122 (146)
T 2jdc_A           45 YYGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKL--G  122 (146)
T ss_dssp             EETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHT--T
T ss_pred             ecCCEEEEEEEEecccccccCCCceEEEEEEEECHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEccccHHHHHHHc--C
Confidence            36899999999887655    33589999999999999999999999999999999999999999998899999999  9


Q ss_pred             cEEEEeecccCcc-cCcc
Q 048173          136 FASVAEVDTEGRA-GRLP  152 (359)
Q Consensus       136 F~~~~e~~~~g~~-~~~~  152 (359)
                      |+..++......+ .++.
T Consensus       123 F~~~~~~~~~~~~~~~~~  140 (146)
T 2jdc_A          123 FSEQGEVFDTPPVGPHIL  140 (146)
T ss_dssp             CEEEEEEEECTTSCEEEE
T ss_pred             CEEecccccCCCCCCeEE
Confidence            9998875543323 4444

>2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134}

Probab=99.53  E-value=1.4e-14  Score=119.83  Aligned_cols=80  Identities=11%  Similarity=0.156  Sum_probs=70.8

Q ss_pred             CCCCcEEEEEEeeecCC--------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhh
Q 048173           60 LNLGKVVAAVIYQIVPA--------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLK  131 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~--------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K  131 (359)
                      .++|+|||.+.+.....        +...++|..++|+|+|||+|||+.|++++++.+++.|++.+.+.++..|.+||+|
T Consensus        59 ~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~~~~~A~~fY~k  138 (153)
T 2q0y_A           59 EEGGAPLAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFAVLHATEMGQPLYAR  138 (153)
T ss_dssp             EETTEEEEEEEEEEEECCCBTTBTTCSEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEECCCTTTHHHHHH
T ss_pred             EeCCeEEEEEEEEeeccCCCCCCCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCHHHHHHHHH
Confidence            36889999998765321        2356899999999999999999999999999999999999999999899999999


Q ss_pred             cccCcEEEEe
Q 048173          132 QVQDFASVAE  141 (359)
Q Consensus       132 ~~~GF~~~~e  141 (359)
                      +  ||+.+++
T Consensus       139 ~--GF~~~~~  146 (153)
T 2q0y_A          139 M--GWSPTTE  146 (153)
T ss_dssp             T--TCCCCCC
T ss_pred             c--CCccchh
Confidence            9  9997775

>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}

Probab=99.48  E-value=1.9e-13  Score=111.28  Aligned_cols=80  Identities=9%  Similarity=0.147  Sum_probs=71.5

Q ss_pred             C-CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 N-LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~-~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      + +|++||.+.+...  +...++|..++|+|+|||+|||+.|++++++.+++.|+++|.+.+...   |..||+|+  ||
T Consensus        56 ~~~~~~vG~~~~~~~--~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~--GF  131 (162)
T 3lod_A           56 SPQGEAVGCGAIVLS--EEGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRN--GY  131 (162)
T ss_dssp             CSSCCEEEEEEEEEC--TTSEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             CCCCCEEEEEEEEEc--CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHc--CC
Confidence            5 8999999998766  346799999999999999999999999999999999999999988764   89999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +..++...
T Consensus       132 ~~~~~~~~  139 (162)
T 3lod_A          132 QTRCAFAP  139 (162)
T ss_dssp             EEECCCTT
T ss_pred             EEcccccc
Confidence            99887433

>1xeb_A Hypothetical protein PA0115; midwest center for structural genomics, MCSG, structural GEN protein structure initiative, PSI, APC22065; 2.35A {Pseudomonas aeruginosa} SCOP: d.108.1.1

Probab=99.47  E-value=9.8e-14  Score=113.46  Aligned_cols=80  Identities=14%  Similarity=0.128  Sum_probs=72.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      ++|++||.+.+...+.....++|..++|+|+|||+|+|+.|++++++.+++. |+..+.+.++..|..||+|+  ||+..
T Consensus        56 ~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~~~--Gf~~~  133 (150)
T 1xeb_A           56 RDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRY--GFVAV  133 (150)
T ss_dssp             ETTEEEEEEEEECSTTTTTCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTT--TEEEC
T ss_pred             ECCEEEEEEEEEccCCCCCeEEEEEEEECHHHccCCHHHHHHHHHHHHHHHhcCCCEEEEechhHHHHHHHHc--CCEEC
Confidence            6889999999876655446799999999999999999999999999999998 99999999998899999999  99988


Q ss_pred             Eee
Q 048173          140 AEV  142 (359)
Q Consensus       140 ~e~  142 (359)
                      ++.
T Consensus       134 ~~~  136 (150)
T 1xeb_A          134 TEV  136 (150)
T ss_dssp             SCC
T ss_pred             Ccc
Confidence            753

>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A

Probab=99.47  E-value=3.8e-13  Score=108.58  Aligned_cols=82  Identities=16%  Similarity=0.246  Sum_probs=72.7

Q ss_pred             CCCCcEEEEEEeeecC-------------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecccc
Q 048173           60 LNLGKVVAAVIYQIVP-------------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKES  125 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~-------------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A  125 (359)
                      .++|++||.+.+....             ++.+.++|..++|+|+|||+|||+.|++++++.+++. |+..+.+.++..|
T Consensus        56 ~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a  135 (166)
T 1cjw_A           56 FVEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDAL  135 (166)
T ss_dssp             EETTEEEEEEEEEEECSSSCCGGGGGCCCTTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGG
T ss_pred             EECCeEEEEEEeeeeccccccccccccccCCCCceEEEEEEECHhhccCChHHHHHHHHHHHHHHhcCcceEEEecCchH
Confidence            3689999999887653             2457799999999999999999999999999999995 9999999888889


Q ss_pred             HHHHhhcccCcEEEEeec
Q 048173          126 SFFFLKQVQDFASVAEVD  143 (359)
Q Consensus       126 ~~Fw~K~~~GF~~~~e~~  143 (359)
                      ..||+|+  ||+..++..
T Consensus       136 ~~~y~k~--GF~~~~~~~  151 (166)
T 1cjw_A          136 VPFYQRF--GFHPAGPCA  151 (166)
T ss_dssp             HHHHHTT--TEEEEEECS
T ss_pred             HHHHHHc--CCeECCccc
Confidence            9999999  999988633

>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A

Probab=99.46  E-value=7.2e-14  Score=132.05  Aligned_cols=101  Identities=13%  Similarity=0.185  Sum_probs=83.8

Q ss_pred             CCCceEEEEcccC-cc--hHHHHHHHhcCcEEecCC---CCeeEEEeCCCCCcHHHHhhcc-----cccCHHHHHHHHhC
Q 048173          249 NGKCFRITLMNIA-DD--SKKVHLTKNLRGAVTSDG---ITSTHVVAGKVRKTLNFFTALS-----WIVSPSWLKESFGE  317 (359)
Q Consensus       249 ~~~~prI~fSgl~-~e--~kk~klik~LGG~V~~d~---~~~THLVa~~~~RT~KfL~AIa-----wIVsp~WL~eS~k~  317 (359)
                      +.-.++.++||.. ++  ..-.+.++.||..|+++.   ..|+||+||+..||.|||+|+|     +||+|+||.+|++.
T Consensus        19 ~~~~i~ai~TGc~~~~~~~~D~~~Lr~LGI~Iv~d~~~~~~~n~LiAPkilRT~KFL~sLa~~P~~~il~p~FI~~~Lk~   98 (256)
T 3t7k_A           19 PNYDLKAVCTGCFHDGFNEVDIEILNQLGIKIFDNIKETDKLNCIFAPKILRTEKFLKSLSFEPLKFALKPEFIIDLLKQ   98 (256)
T ss_dssp             CCCCEEEEESSSCSSCCCHHHHHHHHHTTEEECSSCCGGGCCCEEECSSCCCBHHHHHHTTSTTCCEEECTHHHHHHHHH
T ss_pred             CCeeEEEEecCCcccccCHHHHHHHHHcCeEEEecCcccCCCCEEEcCchhhHHHHHHHhccCccceEeCHHHHHHHHHH
Confidence            3357899999998 53  222467899999999986   6899999999999999999999     69999999999999


Q ss_pred             ---CC------CCCCCcceecCcccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173          318 ---GR------FVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       318 ---g~------flDEe~Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                         |+      .+|.++|.|.|.+.|         .+.| ++.+++||+|+
T Consensus        99 ih~~~~~~~~~~l~~~dY~L~d~~~E---------~l~r-~~~~gkLf~~~  139 (256)
T 3t7k_A           99 IHSKKDKLSQININLFDYEINGINES---------IISK-TKLPTKVFERA  139 (256)
T ss_dssp             HC-------CCCCCSSTTBCTTCCHH---------HHHH-TTSSSCHHHHT
T ss_pred             hhcCCcccccccCChhhccCCCcchh---------HHhh-hccccccccCC
Confidence               88      899999999999987         2244 66678999875

>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}

Probab=99.45  E-value=1.4e-13  Score=111.10  Aligned_cols=82  Identities=11%  Similarity=0.088  Sum_probs=73.7

Q ss_pred             CCCcEEEEEEeeec-------CCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcc
Q 048173           61 NLGKVVAAVIYQIV-------PADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQV  133 (359)
Q Consensus        61 ~~g~IVgvi~l~i~-------~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~  133 (359)
                      ++|++||.+.+...       .++...++|..++|+|+|||+|||+.|++++++.+++.|+..|.+.++..|..||+|+ 
T Consensus        58 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~-  136 (157)
T 3mgd_A           58 ENNQIIATAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLVASKLGRPVYKKY-  136 (157)
T ss_dssp             ETTEEEEEEEEEEEECCCBTTBTTCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEEECCCTTHHHHHHHH-
T ss_pred             ECCEEEEEEEEEeecCCCCccCcCCcEEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHc-
Confidence            68999999987754       2345789999999999999999999999999999999999999999999999999999 


Q ss_pred             cCcEEEEeecc
Q 048173          134 QDFASVAEVDT  144 (359)
Q Consensus       134 ~GF~~~~e~~~  144 (359)
                       ||+.+++...
T Consensus       137 -GF~~~~~~~~  146 (157)
T 3mgd_A          137 -GFQDTDEWLE  146 (157)
T ss_dssp             -TCCCCTTCCC
T ss_pred             -CCeecceEEE
Confidence             9998886554

>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A

Probab=99.44  E-value=6.9e-13  Score=108.43  Aligned_cols=81  Identities=20%  Similarity=0.290  Sum_probs=73.4

Q ss_pred             cCCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhccc
Q 048173           59 FLNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQ  134 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~  134 (359)
                      +.++|++||.+.+...+.    ..+.++|..++|+|+|||+|||+.|++++++.+++.|+..|.+.++..+..||+|+  
T Consensus        71 ~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~--  148 (161)
T 3i3g_A           71 HQPTGRIVGSASLMIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLPFYEKL--  148 (161)
T ss_dssp             ETTTTEEEEEEEEEEECCSSGGGCCEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCSEEEEEECTTTHHHHHHT--
T ss_pred             EEcCCCeEEEEEEEeccCCCCCCccEEEEEEEEEcHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEecccchhHHHhc--
Confidence            347899999999877543    35779999999999999999999999999999999999999999999899999999  


Q ss_pred             CcEEEEe
Q 048173          135 DFASVAE  141 (359)
Q Consensus       135 GF~~~~e  141 (359)
                      ||+.++.
T Consensus       149 GF~~~~~  155 (161)
T 3i3g_A          149 GFRAHER  155 (161)
T ss_dssp             TCEEEEE
T ss_pred             CCeecCc
Confidence            9998875

>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=99.43  E-value=4.6e-13  Score=109.39  Aligned_cols=79  Identities=10%  Similarity=0.127  Sum_probs=70.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec-cccHHHHhhcccCcEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD-KESSFFFLKQVQDFASV  139 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~-~~A~~Fw~K~~~GF~~~  139 (359)
                      ++|++||.+.+..   ....++|..++|+|+|||+|+|+.|++++++.+++.|+.++.+.+. ..|..||+|+  ||+..
T Consensus        59 ~~~~~vG~~~~~~---~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~y~k~--GF~~~  133 (152)
T 2g3a_A           59 DDNSVTGGLVGHT---ARGWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERY--GFTKI  133 (152)
T ss_dssp             TTCCEEEEEEEEE---ETTEEEEEEEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHH--TCEEE
T ss_pred             CCCeEEEEEEEEE---eCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCccHHHHHHHC--CCEEe
Confidence            4899999988776   2356899999999999999999999999999999999999999995 5699999999  99998


Q ss_pred             Eeecc
Q 048173          140 AEVDT  144 (359)
Q Consensus       140 ~e~~~  144 (359)
                      ++...
T Consensus       134 ~~~~~  138 (152)
T 2g3a_A          134 GSLGP  138 (152)
T ss_dssp             EEECC
T ss_pred             eeccC
Confidence            87544

>3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A*

Probab=99.43  E-value=4.1e-13  Score=108.56  Aligned_cols=79  Identities=14%  Similarity=0.131  Sum_probs=71.5

Q ss_pred             CCCCcEEEEEEeeecCC-CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173           60 LNLGKVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      .++|+|||.+.+...+. +...++|..++|+|+|||+|||+.|++++++.+++ |+..|.+.+ ..|..||+|+  ||+.
T Consensus        55 ~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~~i~l~~-~~a~~~y~k~--GF~~  130 (150)
T 3gy9_A           55 LSTTNQVLACGGYMKQSGQARTGRIRHVYVLPEARSHGIGTALLEKIMSEAFL-TYDRLVLYS-EQADPFYQGL--GFQL  130 (150)
T ss_dssp             ECTTCCEEEEEEEEECTTSTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHTT-TCSEEEECC-SSCHHHHHHT--TCEE
T ss_pred             EeCCeEEEEEEEEeccCCCCCeEEEEEEEECHhhcCCCHHHHHHHHHHHHHHh-CCCEEEEec-hHHHHHHHHC--CCEE
Confidence            37899999999877654 55789999999999999999999999999999999 999999999 8899999999  9998


Q ss_pred             EEee
Q 048173          139 VAEV  142 (359)
Q Consensus       139 ~~e~  142 (359)
                      +++.
T Consensus       131 ~~~~  134 (150)
T 3gy9_A          131 VSGE  134 (150)
T ss_dssp             CCCS
T ss_pred             eeee
Confidence            8763

>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1

Probab=99.42  E-value=1.2e-12  Score=106.12  Aligned_cols=80  Identities=18%  Similarity=0.209  Sum_probs=71.4

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEe-ccccHHHHhhcccCcEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWD-DKESSFFFLKQVQDFAS  138 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a-~~~A~~Fw~K~~~GF~~  138 (359)
                      .++|++||.+.+...+   +.++|..++|+|+|||+|+|+.|++++++.+++.|+..+.+.+ +..|..||+|+  ||+.
T Consensus        46 ~~~~~~vG~~~~~~~~---~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~n~~a~~~y~~~--Gf~~  120 (140)
T 1y9w_A           46 NEEGKIFGGVTGTMYF---YHLHIDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKH--GYRE  120 (140)
T ss_dssp             CTTCCEEEEEEEEEET---TEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHT--TCEE
T ss_pred             CCCCeEEEEEEEEEec---CEEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEcCCHhHHHHHHHC--CCEE
Confidence            3689999999876654   4588999999999999999999999999999999999999888 56799999999  9999


Q ss_pred             EEeecc
Q 048173          139 VAEVDT  144 (359)
Q Consensus       139 ~~e~~~  144 (359)
                      .++...
T Consensus       121 ~~~~~~  126 (140)
T 1y9w_A          121 YGVVED  126 (140)
T ss_dssp             EEEESS
T ss_pred             EEEEcC
Confidence            987554

>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}

Probab=99.42  E-value=1.1e-13  Score=116.31  Aligned_cols=91  Identities=15%  Similarity=0.175  Sum_probs=71.7

Q ss_pred             eeecccCCCCCceEEEEcccCcchHH--HHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHH
Q 048173          241 FVSKEFQPNGKCFRITLMNIADDSKK--VHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKES  314 (359)
Q Consensus       241 ~i~~~~~~~~~~prI~fSgl~~e~kk--~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS  314 (359)
                      .......++-.+.+|+|||+.++++.  .++|+.+||.+..+ ..+|||||+..... .|+-.|..   .||+++||.+|
T Consensus        13 ~~~~~~~p~F~g~~Ic~sGf~~~er~~l~~~i~~~GG~~~~~l~~~cTHLV~~~~~~-~K~~~A~~~~i~IVs~eWl~ds   91 (112)
T 3l46_A           13 NLYFQGVPPFQDCILSFLGFSDEEKTNMEEMTEMQGGKYLPLGDERCTHLVVEENIV-KDLPFEPSKKLYVVKQEWFWGS   91 (112)
T ss_dssp             -----CCCTTTTCEECEESCCHHHHHHHHHHHHHTTCEECCTTCTTCSEEEECTTTB-SSCSSCCCSSCEEEEHHHHHHH
T ss_pred             cccccCCCccCCeEEEEeCCCHHHHHHHHHHHHHcCCEECcccCCCceEEEecCCch-hhHHHHHHCCeeEecHHHHHHH
Confidence            34445567778899999999986433  47889999999986 89999999998652 36666666   99999999999


Q ss_pred             HhCCCCCCCCcceecCcc
Q 048173          315 FGEGRFVDESFYMLNDDG  332 (359)
Q Consensus       315 ~k~g~flDEe~Y~L~D~e  332 (359)
                      .+.|..+||..|.|..++
T Consensus        92 i~~g~~ldE~~Y~~~~~~  109 (112)
T 3l46_A           92 IQMDARAGETMYLYEKAN  109 (112)
T ss_dssp             HHHTSCCCGGGSBCCC--
T ss_pred             HHcCCccChhhceeccCC
Confidence            999999999999997764

>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1

Probab=99.42  E-value=4.8e-13  Score=115.41  Aligned_cols=85  Identities=14%  Similarity=0.135  Sum_probs=71.7

Q ss_pred             CCCCcEEEEEEeeecC-----------------------------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHH
Q 048173           60 LNLGKVVAAVIYQIVP-----------------------------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQ  110 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~-----------------------------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk  110 (359)
                      .++|+|||.+.+....                             ......+|..++|+|+|||+|||++|++++++.|+
T Consensus        63 ~~~g~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~  142 (199)
T 1u6m_A           63 EHAGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAK  142 (199)
T ss_dssp             EETTEEEEEEEEEEGGGTTTSSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHH
T ss_pred             EECCeEEEEEEEecCcHHHHHHHHHHHHHHHcCccccccceecccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHH
Confidence            3678999999875432                             12245789999999999999999999999999999


Q ss_pred             HcCCcEEEEEecc---ccHHHHhhcccCcEEEEeecccC
Q 048173          111 SVGIRTIFCWDDK---ESSFFFLKQVQDFASVAEVDTEG  146 (359)
Q Consensus       111 ~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~~e~~~~g  146 (359)
                      +.|++.|.+.+..   .|..||+|+  ||+.+++....|
T Consensus       143 ~~g~~~i~L~v~~~N~~A~~fY~k~--GF~~~~~~~~~~  179 (199)
T 1u6m_A          143 ASGKQALGLNVDFDNPGARKLYASK--GFKDVTTMTISG  179 (199)
T ss_dssp             TTTCSEEEEEEETTCHHHHHHHHTT--TCEEEEEEEETT
T ss_pred             HcCCCEEEEEEecCCHHHHHHHHHC--CCEEccEEEeCC
Confidence            9999999988876   499999999  999998755443

>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*

Probab=99.40  E-value=3.5e-13  Score=125.52  Aligned_cols=108  Identities=19%  Similarity=0.182  Sum_probs=82.7

Q ss_pred             ceEEEEccc--Ccc---hHHHHHHHhcCcEEecC--------CC-------------------CeeEEEeCCCCCcHHHH
Q 048173          252 CFRITLMNI--ADD---SKKVHLTKNLRGAVTSD--------GI-------------------TSTHVVAGKVRKTLNFF  299 (359)
Q Consensus       252 ~prI~fSgl--~~e---~kk~klik~LGG~V~~d--------~~-------------------~~THLVa~~~~RT~KfL  299 (359)
                      +..|++|+.  .++   ....++|++.||.|.++        ..                   ..||||++...||.|++
T Consensus         5 g~~F~ls~~~~~~~~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~~~rt~K~~   84 (241)
T 2vxb_A            5 DCVFAFSGPVHEDAYDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDTFSRKVKYL   84 (241)
T ss_dssp             TEEEEECCCSSTTSSCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSSCCCCHHHH
T ss_pred             CcEEEEecCCCCchhhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCCCCCcHHHH
Confidence            467888888  322   22357899999999886        21                   35999999999999999


Q ss_pred             hhcc---cccCHHHHHHHHhCCCCCCCCcceecCccccccc--------CCCHHHHHHHHHhCCCCCCCCC
Q 048173          300 TALS---WIVSPSWLKESFGEGRFVDESFYMLNDDGYVLKY--------RSELKDAVLRAKARPGGLLKRI  359 (359)
Q Consensus       300 ~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L~D~e~E~k~--------~f~L~~sL~rAr~rp~~LF~Gy  359 (359)
                      .|++   +||+|+||.+|.++++++|+++|+|.+.+.+...        .++..+++..+.+++.+||+||
T Consensus        85 ~ala~gipiV~~~Wi~dc~~~~~~~~~~~ylL~~~~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Lf~g~  155 (241)
T 2vxb_A           85 EALAFNIPCVHPQFIKQCLKMNRVVDFSPYLLASGYSHRLDCTLSQRIEPFDTTDSLYDRLLARKGPLFGK  155 (241)
T ss_dssp             HHHHHTCCEECTHHHHHHHHHTSCCCSGGGBBEEEEETTTTEEEECCCCCCCTTSCHHHHHHHCCCTTTTC
T ss_pred             HHHHcCCCEecHHHHHHHHHcCCcCChhhccCCCCcchhccchhhccccCCChhhHHHHHHhhcCcCCCCc
Confidence            9998   9999999999999999999999999877765432        2232223444444456899996

>1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E*

Probab=99.40  E-value=1.3e-12  Score=112.03  Aligned_cols=81  Identities=16%  Similarity=0.249  Sum_probs=72.6

Q ss_pred             CCCCcEEEEEEeeecCC-------------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecccc
Q 048173           60 LNLGKVVAAVIYQIVPA-------------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKES  125 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~-------------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A  125 (359)
                      .++|+|||.+.+.....             +...++|..++|+|+|||+|||+.|++++++.+++. |++.|++.++..|
T Consensus        85 ~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~~n~~a  164 (207)
T 1kux_A           85 FVEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDAL  164 (207)
T ss_dssp             EETTEEEEEEEEEEECSSSCCGGGGGCCCTTCCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECGGG
T ss_pred             EECCEEEEEEEEEeecccccccccccccCCCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEeecHHH
Confidence            36899999998766442             347899999999999999999999999999999999 9999999999889


Q ss_pred             HHHHhhcccCcEEEEee
Q 048173          126 SFFFLKQVQDFASVAEV  142 (359)
Q Consensus       126 ~~Fw~K~~~GF~~~~e~  142 (359)
                      ..||+|+  ||+.+++.
T Consensus       165 ~~~y~k~--GF~~~~~~  179 (207)
T 1kux_A          165 VPFYQRF--GFHPAGPC  179 (207)
T ss_dssp             HHHHHTT--TCEEEEEC
T ss_pred             HHHHHHC--CCEECCcc
Confidence            9999999  99999863

>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1

Probab=99.40  E-value=1.4e-12  Score=105.22  Aligned_cols=81  Identities=21%  Similarity=0.305  Sum_probs=72.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||++.+...... +.++|..++|+|+|||+|+|+.|++++++.+++.|++++.+.+..   .|..||+|+  ||+
T Consensus        57 ~~~~~vG~~~~~~~~~~-~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~--Gf~  133 (162)
T 2fia_A           57 HEEMIFSMATFCMEQEQ-DFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESK--GFT  133 (162)
T ss_dssp             ETTEEEEEEEEEECTTC-SEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHT--TCE
T ss_pred             ECCEEEEEEEEeeCCCC-CceEEEEEEEcccccCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHC--CCE
Confidence            68999999998776654 668899999999999999999999999999999999999988874   589999999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      ..++...
T Consensus       134 ~~~~~~~  140 (162)
T 2fia_A          134 KIHESLQ  140 (162)
T ss_dssp             EEEEECC
T ss_pred             EEeeEee
Confidence            9987655

>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B

Probab=99.40  E-value=7.9e-14  Score=131.04  Aligned_cols=66  Identities=18%  Similarity=0.218  Sum_probs=60.1

Q ss_pred             HHHHHhcCcEEecCCCC-------eeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCCCcceecCcc
Q 048173          267 VHLTKNLRGAVTSDGIT-------STHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLNDDG  332 (359)
Q Consensus       267 ~klik~LGG~V~~d~~~-------~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L~D~e  332 (359)
                      .++|+.+||.|+++..+       +||||+++..||.|++.|++   |||+++||.+|+++|+++|+++|+|.+..
T Consensus        64 ~~~I~~~GG~v~~~~~~~~~~~~~~t~LIa~~~~rt~K~l~ala~g~~iVs~~Wl~dc~~~~~~l~~~~Y~l~~g~  139 (259)
T 1kzy_C           64 ESQLRAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGY  139 (259)
T ss_dssp             HHHHHTTTCEECSSCCTTTTTTTCEEEEEESSCCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBCCCEE
T ss_pred             HHHHHHCCCEEecCccccccccCCCeEEEcCCCCCcHHHHHHHhcCCCCccHHHHHHHHHcCCcCCHHHccCCCCc
Confidence            47899999999988443       68999999999999999998   99999999999999999999999998644

>1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A

Probab=99.40  E-value=1.3e-12  Score=109.13  Aligned_cols=79  Identities=24%  Similarity=0.175  Sum_probs=70.0

Q ss_pred             CCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF  136 (359)
                      ++|+|||.+.+.....    ...+++|..++|+|+|||+|||+.|++++++.+++.|+.+|.+.+......||+|+  ||
T Consensus        72 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~fY~k~--GF  149 (160)
T 1i12_A           72 RTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKC--GF  149 (160)
T ss_dssp             TTTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHT--TC
T ss_pred             cCCeEEEEEEEEecccccccCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcChhhHHHHHHC--CC
Confidence            6789999888765422    13568899999999999999999999999999999999999999999889999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       150 ~~~g~  154 (160)
T 1i12_A          150 SNAGV  154 (160)
T ss_dssp             EEEEE
T ss_pred             EEcCe
Confidence            98875

>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.39  E-value=1.2e-12  Score=111.53  Aligned_cols=80  Identities=16%  Similarity=0.139  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhc
Q 048173           61 NLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQ  132 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~  132 (359)
                      ++|+|||.+.+.....     ....++|..++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+
T Consensus        66 ~~~~ivG~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~  145 (180)
T 1tiq_A           66 FDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKM  145 (180)
T ss_dssp             ETTEEEEEEEEEEGGGSSSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred             ECCEEEEEEEEEeCCCcccccCCCcEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEehhcCHHHHHHHHHc
Confidence            6789999888765542     23579999999999999999999999999999999999999998843   599999999


Q ss_pred             ccCcEEEEee
Q 048173          133 VQDFASVAEV  142 (359)
Q Consensus       133 ~~GF~~~~e~  142 (359)
                        ||+..+..
T Consensus       146 --GF~~~g~~  153 (180)
T 1tiq_A          146 --GFVQTGAH  153 (180)
T ss_dssp             --TCEEEEEE
T ss_pred             --CCEEcCcE
Confidence              99998863

>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp}

Probab=99.38  E-value=1.6e-12  Score=107.22  Aligned_cols=82  Identities=21%  Similarity=0.291  Sum_probs=73.1

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec-----cccHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD-----KESSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~-----~~A~~Fw~K~~~  134 (359)
                      .++|++||.+.+...+.+...++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+.     ..|..||+|+  
T Consensus        74 ~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~--  151 (177)
T 2r7h_A           74 TEDDDMAGYACYGPTPATEGTYDLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERA--  151 (177)
T ss_dssp             EETTEEEEEEEEEECTTSSSEEEEEEEEECTTTTTTTHHHHHHHHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHT--
T ss_pred             EECCeEEEEEEEEeccCCCCeEEEEEEEECHHHhCCCHHHHHHHHHHHHHHhcCCCEEEEEeccccccHHHHHHHHHc--
Confidence            368999999998877766678999999999999999999999999999999999999998773     3589999999  


Q ss_pred             CcEEEEeec
Q 048173          135 DFASVAEVD  143 (359)
Q Consensus       135 GF~~~~e~~  143 (359)
                      ||+..++..
T Consensus       152 Gf~~~~~~~  160 (177)
T 2r7h_A          152 GFSAEAVLK  160 (177)
T ss_dssp             TCEEEEEEE
T ss_pred             CCEeccccH
Confidence            999988643

>1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.38  E-value=7.8e-13  Score=107.45  Aligned_cols=77  Identities=18%  Similarity=0.248  Sum_probs=70.4

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||.+.+...   .+.++|..++|+|+|||+|+|+.|++++++.+++.|++.+.+.++..|..||+|+  ||+..
T Consensus        48 ~~~~~~vG~~~~~~~---~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~n~~~~~~y~~~--Gf~~~  122 (140)
T 1q2y_A           48 YDGEKPVGAGRWRMK---DGYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGASGFILNAQTQAVPFYKKH--GYRVL  122 (140)
T ss_dssp             EETTEEEEEEEEEEE---TTEEEEEEEECCGGGTTTTHHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHT--TCEES
T ss_pred             EECCeEEEEEEEEEc---CCcEEEEEEEEcHHHhccCHHHHHHHHHHHHHHHCCCcEEEEEecHHHHHHHHHC--CCEEe
Confidence            368999999997652   3568999999999999999999999999999999999999999998999999999  99987


Q ss_pred             Ee
Q 048173          140 AE  141 (359)
Q Consensus       140 ~e  141 (359)
                      ++
T Consensus       123 ~~  124 (140)
T 1q2y_A          123 SE  124 (140)
T ss_dssp             CS
T ss_pred             cc
Confidence            76

>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}

Probab=99.38  E-value=4.5e-12  Score=108.17  Aligned_cols=66  Identities=15%  Similarity=0.076  Sum_probs=58.6

Q ss_pred             CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec-cccHHHHhhcccCcEEEEeecc
Q 048173           77 DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD-KESSFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus        77 d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~-~~A~~Fw~K~~~GF~~~~e~~~  144 (359)
                      .+.+.+|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+. ..|..||+|+  ||+.+++..-
T Consensus       123 ~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~~~~~n~~a~~~Y~k~--GF~~~~~~~~  189 (217)
T 4fd4_A          123 LEKAYHVHILAVDPTYRGHSLGQRLLQFQMDLSKKLGFKAISGDFTSVFSVKLAEKL--GMECISQLAL  189 (217)
T ss_dssp             CSCEEEEEEEEECTTSCSSCHHHHHHHHHHHHHHHHTCSEEEEEECSHHHHHHHHHT--TCEEEEEEEG
T ss_pred             CCceEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHC--CCeEEEeEeH
Confidence            3466778899999999999999999999999999999999988654 4589999999  9999998655

>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A*

Probab=99.38  E-value=2.1e-12  Score=107.16  Aligned_cols=103  Identities=21%  Similarity=0.289  Sum_probs=80.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.+.... +..+++|..++|+|+|||+|+|+.|++++++.+++.|++.+.+.+...|..||+|+  ||+..+
T Consensus        54 ~~~~~vG~~~~~~~~-~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~l~~~~~n~a~~~y~k~--Gf~~~~  130 (160)
T 1qst_A           54 NKQKVIGGICFRQYK-PQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQ--GFTKEH  130 (160)
T ss_dssp             TTTEEEEEEEEEEEG-GGTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHT--TCBSSC
T ss_pred             cCCEEEEEEEEEEec-CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEeCcchhHHHHHHC--CCEEee
Confidence            678999999876553 34678899999999999999999999999999999999999877766899999999  999777


Q ss_pred             eecccCcccCcchhhhhhhcCCCCcEEEecccc
Q 048173          141 EVDTEGRAGRLPLRQKFRKSTEPERVVIDGCSR  173 (359)
Q Consensus       141 e~~~~g~~~~~~~~~~m~K~l~~~~~m~~~l~~  173 (359)
                      ......       .....+......+|.+.|..
T Consensus       131 ~~~~~~-------~~~~~~~~~~~~~m~~~l~~  156 (160)
T 1qst_A          131 RMPQEK-------WKGYIKDYDGGTLMECYIHP  156 (160)
T ss_dssp             SSCHHH-------HTTTSCCCSSSEEEEEECCT
T ss_pred             eecccc-------ceeEEecCCCceEEeeeccc
Confidence            543311       11122222233888888863

>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A

Probab=99.38  E-value=2.7e-12  Score=106.58  Aligned_cols=81  Identities=11%  Similarity=0.014  Sum_probs=71.7

Q ss_pred             CCCCcEEEEEEeeecCC------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHh
Q 048173           60 LNLGKVVAAVIYQIVPA------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFL  130 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~  130 (359)
                      .++|++||.+.+...+.      ....++|..++|+|+|||+|||+.|++++++.+++.|+..|.+.+...   |..||+
T Consensus        69 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~  148 (166)
T 4evy_A           69 YSDHQAIAMLEASIRFEYVNGTETSPVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHR  148 (166)
T ss_dssp             EETTEEEEEEEEEEECSCCTTCSSSSEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHH
T ss_pred             EECCeEEEEEEEEeecccccCCCCCCeEEEEEEEEChhhhcCCHHHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH
Confidence            36799999998755422      257899999999999999999999999999999999999999998876   999999


Q ss_pred             hcccCcEEEEee
Q 048173          131 KQVQDFASVAEV  142 (359)
Q Consensus       131 K~~~GF~~~~e~  142 (359)
                      |+  ||+..++.
T Consensus       149 k~--GF~~~~~~  158 (166)
T 4evy_A          149 SL--GFQETEKV  158 (166)
T ss_dssp             HT--TCEEEEEE
T ss_pred             Hc--CCEecceE
Confidence            99  99998863

>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.38  E-value=1.6e-12  Score=105.23  Aligned_cols=80  Identities=15%  Similarity=0.189  Sum_probs=73.1

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .++|++||.+.+...+.+.+.++|..++|+|+|||+|+|+.|+.++++.+++.|++.|.+.+..   .|..||+|+  ||
T Consensus        48 ~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~--Gf  125 (157)
T 1mk4_A           48 SEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKL--GF  125 (157)
T ss_dssp             ESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHT--TC
T ss_pred             EECCeEEEEEEEecCCCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHc--CC
Confidence            3689999999987777767889999999999999999999999999999999999999998877   489999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..++
T Consensus       126 ~~~~~  130 (157)
T 1mk4_A          126 DIEKG  130 (157)
T ss_dssp             EECCC
T ss_pred             EEcCC
Confidence            98874

>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana}

Probab=99.37  E-value=8.1e-13  Score=105.77  Aligned_cols=78  Identities=18%  Similarity=0.158  Sum_probs=70.4

Q ss_pred             CCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcE
Q 048173           62 LGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFA  137 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~  137 (359)
                      +|++||.+.+...+.    ....++|..++|+|+|||+|||+.|++++++.+++.|+..|.+.+......||+|+  ||+
T Consensus        61 ~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~~y~k~--GF~  138 (149)
T 3t90_A           61 SGKIAATGSVMIEKKFLRNCGKAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVENKVFYEKC--GMS  138 (149)
T ss_dssp             TTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEECCCCGGGHHHHHTT--TCC
T ss_pred             CCcEEEEEEEEeccccCCCCCCceEEEEEEECHHHhCCcHHHHHHHHHHHHHHHCCCeEEEEeccccHHHHHHHC--CCe
Confidence            799999999877532    34678999999999999999999999999999999999999999998888999999  998


Q ss_pred             EEEe
Q 048173          138 SVAE  141 (359)
Q Consensus       138 ~~~e  141 (359)
                      ..+.
T Consensus       139 ~~~~  142 (149)
T 3t90_A          139 NKSI  142 (149)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7664

>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}

Probab=99.37  E-value=2.1e-12  Score=106.65  Aligned_cols=76  Identities=18%  Similarity=0.219  Sum_probs=67.3

Q ss_pred             CCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhc
Q 048173           60 LNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQ  132 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~  132 (359)
                      .++|++||.+.+...+.    ...+++|..++|+|+|||+|||+.|++++++.+++.|+.+|.+.+..   .|..||+|+
T Consensus        57 ~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~  136 (150)
T 2dxq_A           57 TENGKPVATATLLIVPNLTRAARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESC  136 (150)
T ss_dssp             EETTEEEEEEEEEEECCSHHHHCCEEEEEEEECCGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHT
T ss_pred             ecCCEEEEEEEEEEecccccCCCceEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHc
Confidence            36789999999876554    12468999999999999999999999999999999999999998866   389999999


Q ss_pred             ccCcE
Q 048173          133 VQDFA  137 (359)
Q Consensus       133 ~~GF~  137 (359)
                        ||+
T Consensus       137 --GF~  139 (150)
T 2dxq_A          137 --GFV  139 (150)
T ss_dssp             --TCE
T ss_pred             --CCc
Confidence              999

>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}

Probab=99.37  E-value=3.4e-12  Score=105.44  Aligned_cols=80  Identities=11%  Similarity=0.059  Sum_probs=71.0

Q ss_pred             CCCcEEEEEEeeecCC-----------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cH
Q 048173           61 NLGKVVAAVIYQIVPA-----------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SS  126 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-----------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~  126 (359)
                      ++|++||.+.+...+.           +...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+...   |.
T Consensus        73 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~  152 (179)
T 2oh1_A           73 EAGALAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLN  152 (179)
T ss_dssp             TTCCEEEEEEEESSCCHHHHHHHGGGTTSCEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHH
T ss_pred             cCCeEEEEEEEecCCCcchhcccccCCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEecCCcHHHH
Confidence            6899999999765421           246799999999999999999999999999999999999999888764   89


Q ss_pred             HHHhhcccCcEEEEee
Q 048173          127 FFFLKQVQDFASVAEV  142 (359)
Q Consensus       127 ~Fw~K~~~GF~~~~e~  142 (359)
                      .||+|+  ||+.+++.
T Consensus       153 ~~y~k~--GF~~~~~~  166 (179)
T 2oh1_A          153 QMYVRY--GFQFSGKK  166 (179)
T ss_dssp             HHHHHT--TCEEEEEE
T ss_pred             HHHHHC--CCEEeccc
Confidence            999999  99999875

>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*

Probab=99.37  E-value=1.4e-12  Score=106.42  Aligned_cols=77  Identities=19%  Similarity=0.116  Sum_probs=69.1

Q ss_pred             CCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcE
Q 048173           62 LGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFA  137 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~  137 (359)
                      +|+|||.+.+.+.+.    ....++|..++|+|+|||+|||+.|++++++.+++.|+.+|.+.+...+..||+|+  ||+
T Consensus        78 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~Y~k~--GF~  155 (165)
T 4ag7_A           78 SQKVVASASLVVEMKFIHGAGSRGRVEDVVVDTEMRRQKLGAVLLKTLVSLGKSLGVYKISLECVPELLPFYSQF--GFQ  155 (165)
T ss_dssp             TTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEEECSCGGGHHHHHTT--TCE
T ss_pred             CCeEEEEEEEEecccccCCCCcEEEEEEEEECHHhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeCHHHHHHHHHC--CCC
Confidence            899999999875332    34678999999999999999999999999999999999999999998899999999  997


Q ss_pred             EEE
Q 048173          138 SVA  140 (359)
Q Consensus       138 ~~~  140 (359)
                      ..+
T Consensus       156 ~~~  158 (165)
T 4ag7_A          156 DDC  158 (165)
T ss_dssp             ECC
T ss_pred             ccc
Confidence            554

>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1

Probab=99.37  E-value=1.6e-12  Score=106.22  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=68.8

Q ss_pred             CCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173           61 NLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV  133 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~  133 (359)
                      ++|+|||.+.+...+.    +...++|..++|+|+|||+|||+.|++++++.|++.|++.|.+.+..   .|..||+|+ 
T Consensus        62 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~-  140 (153)
T 1z4e_A           62 NGEEIVGMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQL-  140 (153)
T ss_dssp             ETTEEEEEEEEEEEECSHHHHCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHH-
T ss_pred             cCCcEEEEEEEEecCCcccCCccceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHc-
Confidence            6789999998776543    22457899999999999999999999999999999999999888764   599999999 


Q ss_pred             cCcEEEEe
Q 048173          134 QDFASVAE  141 (359)
Q Consensus       134 ~GF~~~~e  141 (359)
                       ||+....
T Consensus       141 -GF~~~~~  147 (153)
T 1z4e_A          141 -GFKASHE  147 (153)
T ss_dssp             -TCEEEEE
T ss_pred             -CCceece
Confidence             9998764

>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus}

Probab=99.37  E-value=2.7e-12  Score=107.81  Aligned_cols=81  Identities=19%  Similarity=0.143  Sum_probs=70.3

Q ss_pred             CCCcEEEEEEeeecCC---------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecc---ccHH
Q 048173           61 NLGKVVAAVIYQIVPA---------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDK---ESSF  127 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~---------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~  127 (359)
                      ++|++||.+.+...+.         ....++|..++|+|+|||+|||+.|++++++.+++. |+++|.+.+..   .|..
T Consensus        59 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~A~~  138 (168)
T 2x7b_A           59 VDNSVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIA  138 (168)
T ss_dssp             ETTEEEEEEEEEEEEEECSSCSSCCEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCHHHHH
T ss_pred             ECCeEEEEEEEEEeccccccccccCCCcEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHhcCeeEEEEEEEeCCHHHHH
Confidence            5889999998776432         224789999999999999999999999999999999 99999998865   4899


Q ss_pred             HHhhcccCcEEEEeec
Q 048173          128 FFLKQVQDFASVAEVD  143 (359)
Q Consensus       128 Fw~K~~~GF~~~~e~~  143 (359)
                      ||+|+  ||+..+...
T Consensus       139 ~Yek~--GF~~~~~~~  152 (168)
T 2x7b_A          139 LYEKL--NFKKVKVLK  152 (168)
T ss_dssp             HHHHT--TCEEEEEET
T ss_pred             HHHHC--CCEEEEEee
Confidence            99999  999988743

>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.36  E-value=4.3e-13  Score=110.96  Aligned_cols=87  Identities=15%  Similarity=0.225  Sum_probs=71.6

Q ss_pred             cCCCCCceEEEEcccCcchHH--HHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCC
Q 048173          246 FQPNGKCFRITLMNIADDSKK--VHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGR  319 (359)
Q Consensus       246 ~~~~~~~prI~fSgl~~e~kk--~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~  319 (359)
                      ..+.-.+.+|+|||+.++++.  .++++.+||.++.+ ..+|||||+.... +.|+-.|..   .||+++||.||++.|+
T Consensus         9 ~~~~F~g~~i~~sg~~~~~r~~l~~~i~~~GG~~~~~~~~~~THLV~~~~~-~~K~~~a~~~~i~IV~~~Wl~dsi~~g~   87 (109)
T 2cou_A            9 KVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGSYLPVGDERCTHLIVEENT-VKDLPFEPSKKLFVVKQEWFWGSIQMDA   87 (109)
T ss_dssp             CCCTTTTCBEEEESSCHHHHHHHHHHHHHHTCBCCCTTCTTCSEEEECTTT-CSSCSSCCCTTSEEECHHHHHHHHHTTS
T ss_pred             cCCcCCCeEEEecCCCHHHHHHHHHHHHHcCCEEecccCCCccEEEEeCCc-cHHHHHHHHCCCeEecHHHHHHHHHcCC
Confidence            345667889999999875432  47889999999986 8899999998653 456666665   9999999999999999


Q ss_pred             CCCCCcceecCccc
Q 048173          320 FVDESFYMLNDDGY  333 (359)
Q Consensus       320 flDEe~Y~L~D~e~  333 (359)
                      .+||++|.+.+..-
T Consensus        88 ~ldE~~Y~~~~~~t  101 (109)
T 2cou_A           88 RAGETMYLYEKANT  101 (109)
T ss_dssp             CCCGGGTBCCCCCC
T ss_pred             cCChhccCCCCCCC
Confidence            99999999987544

>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*

Probab=99.36  E-value=3.9e-12  Score=104.66  Aligned_cols=81  Identities=14%  Similarity=0.059  Sum_probs=71.6

Q ss_pred             CCCcEEEEEEeeec------CCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhh
Q 048173           61 NLGKVVAAVIYQIV------PADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLK  131 (359)
Q Consensus        61 ~~g~IVgvi~l~i~------~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K  131 (359)
                      ++|++||.+.+...      .++...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+..   .|..||+|
T Consensus        70 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k  149 (165)
T 1s3z_A           70 ADGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQA  149 (165)
T ss_dssp             ETTEEEEEEEEEEECSCCTTCSSSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHH
T ss_pred             ECCEEEEEEEEEecccccccccCCCcEEEEEEEEChhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHH
Confidence            68999999998872      1245789999999999999999999999999999999999999998876   38999999


Q ss_pred             cccCcEEEEeec
Q 048173          132 QVQDFASVAEVD  143 (359)
Q Consensus       132 ~~~GF~~~~e~~  143 (359)
                      +  ||+..++..
T Consensus       150 ~--GF~~~~~~~  159 (165)
T 1s3z_A          150 L--GFEETERVI  159 (165)
T ss_dssp             T--TCEEEEEEE
T ss_pred             c--CCeEeeeEE
Confidence            9  999988643

>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.36  E-value=2e-12  Score=109.62  Aligned_cols=86  Identities=16%  Similarity=0.191  Sum_probs=73.3

Q ss_pred             CCCCceEEEEcccCcch--HHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCC
Q 048173          248 PNGKCFRITLMNIADDS--KKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV  321 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e~--kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~fl  321 (359)
                      ..-.+.+|+|||+....  ...++|+.+||.|+.+ ..+|||||++. .++.|+..|..   +||+++||.+|+++++.+
T Consensus        21 ~~f~g~~i~itG~~~~~r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~-~~~~K~~~A~~~gi~IV~~~Wl~d~~~~~~~l   99 (129)
T 2d8m_A           21 KILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAF-ANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRL   99 (129)
T ss_dssp             TTSTTEEEEEESCCTTHHHHHHHHHHHTTEEEESSCCTTCCEEEESS-SSCHHHHHHHHHTCEEEETHHHHHHHHTTSCC
T ss_pred             ccCCCeEEEEeCCCcHHHHHHHHHHHHcCCEEeCCcCCCCeEEEecC-CCChHHHHHHHCCCcEecHHHHHHHHHhCCcC
Confidence            44677899999998532  2357889999999988 77899999995 57899998876   999999999999999999


Q ss_pred             CCCcceecCcccc
Q 048173          322 DESFYMLNDDGYV  334 (359)
Q Consensus       322 DEe~Y~L~D~e~E  334 (359)
                      ||++|.|.+++..
T Consensus       100 ~e~~Y~l~~~~~~  112 (129)
T 2d8m_A          100 PSQRYLMAGPGSS  112 (129)
T ss_dssp             CGGGGBCSSSSCC
T ss_pred             ChHhcccCCCCcC
Confidence            9999999876643

>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}

Probab=99.36  E-value=2.1e-12  Score=105.60  Aligned_cols=76  Identities=16%  Similarity=0.143  Sum_probs=66.2

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .++|++||.+.+...   ...++|..++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+  ||
T Consensus        52 ~~~~~ivG~~~~~~~---~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~--GF  126 (144)
T 2pdo_A           52 EVNGEVVGTVMGGYD---GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERL--GY  126 (144)
T ss_dssp             EETTEEEEEEEEEEC---SSCEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEESSCHHHHHHHHHT--TC
T ss_pred             EcCCcEEEEEEeecC---CCceEEEEEEECccccCCcHHHHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHHc--CC
Confidence            368999999886543   3458899999999999999999999999999999999999987754   488999999  99


Q ss_pred             EEEE
Q 048173          137 ASVA  140 (359)
Q Consensus       137 ~~~~  140 (359)
                      +..+
T Consensus       127 ~~~~  130 (144)
T 2pdo_A          127 EHAD  130 (144)
T ss_dssp             EECS
T ss_pred             cccc
Confidence            9754

>1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A*

Probab=99.36  E-value=4e-12  Score=107.94  Aligned_cols=81  Identities=20%  Similarity=0.117  Sum_probs=70.9

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-----------------
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-----------------  123 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-----------------  123 (359)
                      ++|++||.+.+...+ +...++|..++|+|+|||+|||+.|++++++.+++.|+++|.+.+..                 
T Consensus        52 ~~~~~vG~~~~~~~~-~~~~~~i~~l~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~i~l~~~~~n~~s~~~~~~~~~~~~  130 (180)
T 1n71_A           52 DQDELVGFIGAIPQY-GITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTF  130 (180)
T ss_dssp             ETTEEEEEEEEEEEE-TTTEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHH
T ss_pred             cCCeEEEEEEEeccC-CCceEEEEEEEEccccccCCHHHHHHHHHHHHHHHCCCcEEEEEecCCcccccccccccccccc
Confidence            579999999986543 34678999999999999999999999999999999999999998743                 


Q ss_pred             -----------ccHHHHhhcccCcEEEEeecc
Q 048173          124 -----------ESSFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus       124 -----------~A~~Fw~K~~~GF~~~~e~~~  144 (359)
                                 .|..||+|+  ||+..+....
T Consensus       131 ~~~~~v~n~~~~a~~~y~k~--GF~~~~~~~~  160 (180)
T 1n71_A          131 DKVASIQNLREHPYEFYEKL--GYKIVGVLPN  160 (180)
T ss_dssp             HHHHTCCBSSCCTHHHHHHT--TCEEEEEETT
T ss_pred             hhhhhhcccchHHHHHHHHc--CcEEEeeecc
Confidence                       368999999  9999987554

>3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus}

Probab=99.36  E-value=9.7e-13  Score=107.21  Aligned_cols=79  Identities=23%  Similarity=0.274  Sum_probs=70.4

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||++.+...+. ...++|..++|+|+|||+|||+.|++++++.+++.|+..|++. +..|..||+|+  ||+.+
T Consensus        49 ~~~~~ivG~~~~~~~~~-~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~-n~~a~~~y~k~--GF~~~  124 (150)
T 3e0k_A           49 EKDGLIIGCAALYPYSE-ERKAEMACVAIHPDYRDGNRGLLLLNYMKHRSKSENINQIFVL-TTHSLHWFREQ--GFYEV  124 (150)
T ss_dssp             EETTEEEEEEEEEEEGG-GTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCCEEECC-CSSCHHHHHHH--TCCCC
T ss_pred             EECCEEEEEEEEEEcCC-CCeEEEEEEEECHHHhccCHHHHHHHHHHHHHHHCCCcEEEEe-cHHHHHHHHHc--CCeec
Confidence            46899999998876653 4679999999999999999999999999999999999999987 66799999999  99987


Q ss_pred             Eee
Q 048173          140 AEV  142 (359)
Q Consensus       140 ~e~  142 (359)
                      +..
T Consensus       125 ~~~  127 (150)
T 3e0k_A          125 GVD  127 (150)
T ss_dssp             CGG
T ss_pred             Ccc
Confidence            753

>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}

Probab=99.35  E-value=2.1e-12  Score=105.43  Aligned_cols=80  Identities=16%  Similarity=0.242  Sum_probs=57.1

Q ss_pred             CCCCcEEEEEEeeecC------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEe---ccccHHHHh
Q 048173           60 LNLGKVVAAVIYQIVP------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWD---DKESSFFFL  130 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a---~~~A~~Fw~  130 (359)
                      .++|++||.+.+....      .....++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+   +..|..||+
T Consensus        62 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~  141 (166)
T 3jvn_A           62 EMDDVIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYN  141 (166)
T ss_dssp             ESSSSEEEEEEEEEEEECCSSSCCEEEEEEEEEEECTTTCSSSHHHHHHHHHHHHHHTTTCSEEEECCC--CCBC-----
T ss_pred             EECCEEEEEEEEEeeccccccccCccEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHH
Confidence            3689999999976532      1336789999999999999999999999999999999999999988   446999999


Q ss_pred             hcccCcEEEEe
Q 048173          131 KQVQDFASVAE  141 (359)
Q Consensus       131 K~~~GF~~~~e  141 (359)
                      |+  ||+..++
T Consensus       142 k~--GF~~~~~  150 (166)
T 3jvn_A          142 KQ--GLNEHIH  150 (166)
T ss_dssp             -----------
T ss_pred             Hc--CCeEHHH
Confidence            99  9998876

>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*

Probab=99.35  E-value=6e-12  Score=102.84  Aligned_cols=81  Identities=16%  Similarity=0.159  Sum_probs=71.7

Q ss_pred             CCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc--ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK--ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~--~A~~Fw~K~~~GF  136 (359)
                      ++|++||++.+...+.  +...++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+..  .|..||+|+  ||
T Consensus        69 ~~~~~vG~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~--Gf  146 (177)
T 1ghe_A           69 EDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSAL--AY  146 (177)
T ss_dssp             ETTEEEEEEEEEECCSTTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHT--TC
T ss_pred             cCCEEEEEEEEEeccCCCCcceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccCCHHHHHHHHc--CC
Confidence            6899999999887653  34579999999999999999999999999999999999999888753  499999999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +..++..
T Consensus       147 ~~~~~~~  153 (177)
T 1ghe_A          147 TRVGELP  153 (177)
T ss_dssp             EEEEEEE
T ss_pred             EEccccc
Confidence            9988744

>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1

Probab=99.35  E-value=3.4e-12  Score=106.60  Aligned_cols=80  Identities=20%  Similarity=0.204  Sum_probs=68.0

Q ss_pred             CCCCcEEEEEEeeecC----CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhc
Q 048173           60 LNLGKVVAAVIYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQ  132 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~----~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~  132 (359)
                      .++|++||.+.+...+    .+...++|..++|+|+|||+|||+.|++++++.+++.| ++|.+++..   .|..||+|+
T Consensus        61 ~~~~~ivG~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~  139 (159)
T 1wwz_A           61 KVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKF  139 (159)
T ss_dssp             EETTEEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHT
T ss_pred             EECCEEEEEEEEeccccccccCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHC
Confidence            3688999998875432    13345899999999999999999999999999999999 999988764   489999999


Q ss_pred             ccCcEEEEee
Q 048173          133 VQDFASVAEV  142 (359)
Q Consensus       133 ~~GF~~~~e~  142 (359)
                        ||+..++.
T Consensus       140 --GF~~~~~~  147 (159)
T 1wwz_A          140 --GFKKVGKS  147 (159)
T ss_dssp             --TCEEEEEE
T ss_pred             --CCEEcccc
Confidence              99988863

>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*

Probab=99.34  E-value=3.8e-12  Score=102.81  Aligned_cols=82  Identities=12%  Similarity=0.120  Sum_probs=70.9

Q ss_pred             CCC-cEEEEEEeeecCC-------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHH
Q 048173           61 NLG-KVVAAVIYQIVPA-------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFF  129 (359)
Q Consensus        61 ~~g-~IVgvi~l~i~~~-------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw  129 (359)
                      ++| ++||.+.+.....       +...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+..   .|..||
T Consensus        61 ~~~g~~vG~~~~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y  140 (164)
T 4e0a_A           61 DEREKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVDAIELDVYDFNDRAKAFY  140 (164)
T ss_dssp             EETTEEEEEEEEEEEEECCCSSBCCEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHH
T ss_pred             CCCCcEEEEEEEEecCCCCCccccCCcEEEEEEEEECHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEEcCCHHHHHHH
Confidence            344 9999999876642       34679999999999999999999999999999999999999888655   489999


Q ss_pred             hhcccCcEEEEeecc
Q 048173          130 LKQVQDFASVAEVDT  144 (359)
Q Consensus       130 ~K~~~GF~~~~e~~~  144 (359)
                      +|+  ||+.+++...
T Consensus       141 ~k~--GF~~~~~~~~  153 (164)
T 4e0a_A          141 HSL--GMRCQKQTME  153 (164)
T ss_dssp             HHT--TCEEEEEEEE
T ss_pred             HHc--CCEEeceecc
Confidence            999  9999886554

>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}

Probab=99.34  E-value=1.5e-12  Score=104.36  Aligned_cols=79  Identities=11%  Similarity=0.171  Sum_probs=62.2

Q ss_pred             CCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec--c---ccHHHHhhc
Q 048173           61 NLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD--K---ESSFFFLKQ  132 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~--~---~A~~Fw~K~  132 (359)
                      ++|++||.+.+...++   +...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+.  .   .|..||+|+
T Consensus        58 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~  137 (150)
T 3t9y_A           58 KENKIIGLSGMCKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDN  137 (150)
T ss_dssp             ETTEEEEEEEEEEEECSSSSCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSCEEECCCCCC------------
T ss_pred             ECCEEEEEEEEEEeccccccCCEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHc
Confidence            6899999998877652   4578999999999999999999999999999999999999999987  3   499999999


Q ss_pred             ccCcEEEEe
Q 048173          133 VQDFASVAE  141 (359)
Q Consensus       133 ~~GF~~~~e  141 (359)
                        ||+..+.
T Consensus       138 --GF~~~~~  144 (150)
T 3t9y_A          138 --GYVSNTS  144 (150)
T ss_dssp             --CCCCCCC
T ss_pred             --CCEEecc
Confidence              9997653

>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*

Probab=99.33  E-value=9.8e-12  Score=100.67  Aligned_cols=80  Identities=25%  Similarity=0.273  Sum_probs=71.0

Q ss_pred             CCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      ++|++||.+.+....+   ....++|..++|+|+|||+|+|+.|+.++++.+++.|+++|.+.+..   .|..||+|+  
T Consensus        66 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~--  143 (174)
T 2cy2_A           66 ESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHL--  143 (174)
T ss_dssp             TTSCEEEEEEEEECCSCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT--
T ss_pred             cCCEEEEEEEEecCCCCCCCCCceEEEEEEECHHHhCcCHHHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHc--
Confidence            6889999999887663   24679999999999999999999999999999999999999888755   489999999  


Q ss_pred             CcEEEEee
Q 048173          135 DFASVAEV  142 (359)
Q Consensus       135 GF~~~~e~  142 (359)
                      ||+..++.
T Consensus       144 Gf~~~~~~  151 (174)
T 2cy2_A          144 GGVLLGER  151 (174)
T ss_dssp             TCEEEEEE
T ss_pred             CCeeeceE
Confidence            99998853

>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*

Probab=99.32  E-value=3.2e-12  Score=107.44  Aligned_cols=78  Identities=19%  Similarity=0.275  Sum_probs=70.4

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .++|++||.+.+...   ...++|..++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+  ||
T Consensus        93 ~~~~~ivG~~~~~~~---~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~--GF  167 (183)
T 3fix_A           93 FADSTLIGFIELKII---ANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKN--GF  167 (183)
T ss_dssp             EETTEEEEEEEEEEE---TTEEEEEEEEECGGGCCHHHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             EeCCEEEEEEEEEeC---CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHc--CC
Confidence            368999999998766   4679999999999999999999999999999999999999998844   589999999  99


Q ss_pred             EEEEee
Q 048173          137 ASVAEV  142 (359)
Q Consensus       137 ~~~~e~  142 (359)
                      +.+++.
T Consensus       168 ~~~~~~  173 (183)
T 3fix_A          168 KVEDTD  173 (183)
T ss_dssp             EEEEEC
T ss_pred             EEeccc
Confidence            999874

>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*

Probab=99.32  E-value=6e-12  Score=106.40  Aligned_cols=78  Identities=14%  Similarity=0.047  Sum_probs=67.5

Q ss_pred             CCcEEEEEEeeec--CCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           62 LGKVVAAVIYQIV--PADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        62 ~g~IVgvi~l~i~--~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      +|+|||.+.+...  ++..+.++|..++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+  ||
T Consensus        68 ~~~ivG~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~--GF  145 (170)
T 2bei_A           68 GPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKAL--GA  145 (170)
T ss_dssp             CCEEEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             CCcEEEEEEEEeeccccCCCcEEEEEEEEChHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeccCHHHHHHHHHC--CC
Confidence            7899998876542  3444678999999999999999999999999999999999999888766   499999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +.+++
T Consensus       146 ~~~~~  150 (170)
T 2bei_A          146 QDLTE  150 (170)
T ss_dssp             EEHHH
T ss_pred             Eeccc
Confidence            97553

>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}

Probab=99.32  E-value=1.6e-11  Score=99.26  Aligned_cols=80  Identities=15%  Similarity=0.211  Sum_probs=69.6

Q ss_pred             CCCc-EEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGK-VVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~-IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|+ +||.+.+....  ...++|..++|+|+|||+|+|+.|++++++.+++.|+++|.+.+..   .|..||+|+  ||
T Consensus        60 ~~~~~~vG~~~~~~~~--~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~--GF  135 (163)
T 3d8p_A           60 NNHQNIVGTIGLIRLD--NNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNN--GF  135 (163)
T ss_dssp             CTTCCEEEEEEEEECS--TTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHT--TC
T ss_pred             eCCCeEEEEEEEEecC--CCEEEEEEEEEChhhccCCHHHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHC--CC
Confidence            5677 99999876544  3568999999999999999999999999999999999999998876   389999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +..++...
T Consensus       136 ~~~~~~~~  143 (163)
T 3d8p_A          136 REIKRGDL  143 (163)
T ss_dssp             EEECGGGS
T ss_pred             EEeeeccc
Confidence            99876433

>2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A*

Probab=99.32  E-value=8.1e-12  Score=100.75  Aligned_cols=80  Identities=11%  Similarity=0.081  Sum_probs=69.7

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      .++|++||.+.+..... ...++|..++|+|+|||+|+|+.|++++++.+++ .|++.|.+.+..   .|..||+|+  |
T Consensus        56 ~~~~~~vG~~~~~~~~~-~~~~~i~~~~v~p~~rg~Gig~~l~~~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~--G  132 (160)
T 2i6c_A           56 VHDGQVLGFANFYQWQH-GDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQL--G  132 (160)
T ss_dssp             EETTEEEEEEEEEEEET-TTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHT--T
T ss_pred             EeCCeEEEEEEEEEEcC-CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEecCCHHHHHHHHHc--C
Confidence            36899999999776543 3568999999999999999999999999999999 799999988765   488899999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+..+..
T Consensus       133 f~~~~~~  139 (160)
T 2i6c_A          133 YQPRAIA  139 (160)
T ss_dssp             CEEEEEE
T ss_pred             CEEcccc
Confidence            9988853

>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1

Probab=99.31  E-value=8e-12  Score=102.56  Aligned_cols=73  Identities=18%  Similarity=0.165  Sum_probs=67.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.+.      ..++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.++..|..||+|+  ||+.++
T Consensus        69 ~~~~~vG~~~~~------~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~n~~a~~~y~k~--GF~~~~  140 (172)
T 2fiw_A           69 LQGVPVGFASLK------GPDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKR--GYVAKQ  140 (172)
T ss_dssp             ETTEEEEEEEEE------TTTEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTT--TCEEEE
T ss_pred             ECCEEEEEEEEe------cCcEEEEEEECccccCcCHHHHHHHHHHHHHHhcCCcEEEEEeCHHHHHHHHHc--CCEEec
Confidence            689999999976      236799999999999999999999999999999999999999988899999999  999877


Q ss_pred             e
Q 048173          141 E  141 (359)
Q Consensus       141 e  141 (359)
                      +
T Consensus       141 ~  141 (172)
T 2fiw_A          141 R  141 (172)
T ss_dssp             E
T ss_pred             c
Confidence            5

>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1

Probab=99.31  E-value=6.9e-12  Score=104.88  Aligned_cols=80  Identities=16%  Similarity=0.163  Sum_probs=68.0

Q ss_pred             CCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      ++|++||.+.+.....   ....+++ .++|+|+|||+|||+.|++++++.|++.|+++|.+.+..   .|..||+|+  
T Consensus        60 ~~~~ivG~~~~~~~~~~~~~~~~~~~-~l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Yek~--  136 (166)
T 2ae6_A           60 SGQQLAGFIEVHPPTSLAAHQKQWLL-SIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKH--  136 (166)
T ss_dssp             ETTEEEEEEEEECSSSCGGGTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHT--
T ss_pred             eCCEEEEEEEEEeccccCCCceEEEE-EEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeecCCHHHHHHHHHc--
Confidence            5789999999876522   2245656 799999999999999999999999999999999998865   499999999  


Q ss_pred             CcEEEEeec
Q 048173          135 DFASVAEVD  143 (359)
Q Consensus       135 GF~~~~e~~  143 (359)
                      ||+..+...
T Consensus       137 GF~~~~~~~  145 (166)
T 2ae6_A          137 GFVQEAHFK  145 (166)
T ss_dssp             TCEEEEEEE
T ss_pred             CCEEeeEEc
Confidence            999988644

>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B*

Probab=99.31  E-value=7.2e-12  Score=104.15  Aligned_cols=79  Identities=25%  Similarity=0.394  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.+...+ +..+++|..++|+|+|||+|+|+.|++++++.+++.|+..+.+..+..|..||+|+  ||+..+
T Consensus        61 ~~~~~vG~~~~~~~~-~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~~~~~~~~~a~~~y~k~--GF~~~~  137 (168)
T 1z4r_A           61 KDGRVIGGICFRMFP-TQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQ--GFSKDI  137 (168)
T ss_dssp             ETTEEEEEEEEEEET-TTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHT--TEESCC
T ss_pred             ECCEEEEEEEEEEec-CCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCcEEEEeCChHHHHHHHHC--CCcEee
Confidence            679999999877664 34678899999999999999999999999999999999999877777799999999  999776


Q ss_pred             ee
Q 048173          141 EV  142 (359)
Q Consensus       141 e~  142 (359)
                      ..
T Consensus       138 ~~  139 (168)
T 1z4r_A          138 KV  139 (168)
T ss_dssp             CS
T ss_pred             cc
Confidence            53

>2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A

Probab=99.30  E-value=4.6e-12  Score=106.84  Aligned_cols=83  Identities=20%  Similarity=0.125  Sum_probs=72.5

Q ss_pred             CCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcE
Q 048173           62 LGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFA  137 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~  137 (359)
                      +|++||.+.+...+.    ....++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+......||+|+  ||+
T Consensus        94 ~g~ivG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~--GF~  171 (184)
T 2o28_A           94 LGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLPQNVGFYKKF--GYT  171 (184)
T ss_dssp             TTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTEEEEEEEECGGGHHHHHTT--TCE
T ss_pred             CCcEEEEEEEEeccccCCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHC--CCe
Confidence            799999999876542    24679999999999999999999999999999999999999999988889999999  999


Q ss_pred             EEEeecccC
Q 048173          138 SVAEVDTEG  146 (359)
Q Consensus       138 ~~~e~~~~g  146 (359)
                      ..++....|
T Consensus       172 ~~~~~~~~~  180 (184)
T 2o28_A          172 VSEENYMCR  180 (184)
T ss_dssp             ECSSEEEEE
T ss_pred             eecccceeh
Confidence            877644333

>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A

Probab=99.30  E-value=8.7e-12  Score=99.45  Aligned_cols=78  Identities=12%  Similarity=0.165  Sum_probs=68.0

Q ss_pred             CCCcEEEEEEeeecC---CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~---~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      ++|++||.+.+....   .+...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+..   .|..||+|+  
T Consensus        61 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~--  138 (152)
T 1qsm_A           61 SSEKIIGMINFFNHMTTWDFKDKIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKV--  138 (152)
T ss_dssp             SSCCEEEEEEEEEECCTTCSSCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHH--
T ss_pred             CCCeEEEEEEEEecCCccccccceEEEEEEechhcccCCHHHHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHc--
Confidence            688999999987642   245789999999999999999999999999999999999999887765   389999999  


Q ss_pred             CcEEEE
Q 048173          135 DFASVA  140 (359)
Q Consensus       135 GF~~~~  140 (359)
                      ||+...
T Consensus       139 Gf~~~~  144 (152)
T 1qsm_A          139 GYKAPK  144 (152)
T ss_dssp             EEECSE
T ss_pred             CCCccc
Confidence            999543

>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}

Probab=99.29  E-value=6.2e-12  Score=98.64  Aligned_cols=81  Identities=21%  Similarity=0.186  Sum_probs=63.7

Q ss_pred             CCCCCceEEEEcccCcc--hHHHHHHHhcCcEEecC-C--CCeeEEEeCCCCCcHHHHhhcc-cccCHHHHHHHHhCCCC
Q 048173          247 QPNGKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-G--ITSTHVVAGKVRKTLNFFTALS-WIVSPSWLKESFGEGRF  320 (359)
Q Consensus       247 ~~~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~--~~~THLVa~~~~RT~KfL~AIa-wIVsp~WL~eS~k~g~f  320 (359)
                      ...-++.+|.++|+...  ....++|+.+||.++.+ .  .+|||||++... ..|...+.. .||+|+||.||.++|+.
T Consensus         5 ~~~f~g~~~~i~g~~~~~~~~l~~~i~~~GG~~~~~~~~~~~~THlI~~~~~-~~K~~~~~~~~iV~~~Wi~dci~~~~~   83 (92)
T 4id3_A            5 SKIFKNCVIYINGYTKPGRLQLHEMIVLHGGKFLHYLSSKKTVTHIVASNLP-LKKRIEFANYKVVSPDWIVDSVKEARL   83 (92)
T ss_dssp             -CTTTTCEEEECSCCSSCHHHHHHHHHHTTCEEESSCCCTTTCCEEECSCCC-HHHHHHTTTSCEECTHHHHHHHHHTSC
T ss_pred             ccccCCEEEEEeCCCCcCHHHHHHHHHHCCCEEEEEecCCCceEEEEecCCC-HHHHHHcCCCCEEcccHHHHHHHcCCc
Confidence            34456788999996432  33457899999999987 4  689999998754 345444434 99999999999999999


Q ss_pred             CCCCccee
Q 048173          321 VDESFYML  328 (359)
Q Consensus       321 lDEe~Y~L  328 (359)
                      +||++|.|
T Consensus        84 l~e~~Y~l   91 (92)
T 4id3_A           84 LPWQNYSL   91 (92)
T ss_dssp             CCGGGGBC
T ss_pred             CChhhccc
Confidence            99999987

>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1}

Probab=99.29  E-value=5.2e-12  Score=106.18  Aligned_cols=83  Identities=19%  Similarity=0.136  Sum_probs=68.5

Q ss_pred             CCCCcEEEEEEeeec--------------------CCCCce--eeee---EEEeccCccccChHHHHHHHHHHHHHHcCC
Q 048173           60 LNLGKVVAAVIYQIV--------------------PADTQY--AEVP---LAAVSSIYQHKGVGRLLYLKLRKRLQSVGI  114 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~--------------------~~d~~~--a~I~---~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI  114 (359)
                      .++|+|||++.....                    +....+  ++|.   .++|+|+|||+|||+.|++++++.+++.|+
T Consensus        62 ~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~  141 (197)
T 3qb8_A           62 DADDNIKAQILNIPYDAYENMHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIGSEVTGKGLATKLLKKTIEESSSHGF  141 (197)
T ss_dssp             CTTCCEEEEEEEEEHHHHHTCCCCCCGGGHHHHHHHHGGGGSCCSSCEEEEEEEEESSCSSSHHHHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEEEecCCcccchHHHHHHHHHHHHHHhcCcCcceeeEeeeceEEEECHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence            368999999664443                    111122  6677   999999999999999999999999999999


Q ss_pred             cEEEEEe-ccccHHHHhhcccCcEEEEeecc
Q 048173          115 RTIFCWD-DKESSFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus       115 ~~I~l~a-~~~A~~Fw~K~~~GF~~~~e~~~  144 (359)
                      ..+.+.+ +..|..||+|+  ||+.+++..-
T Consensus       142 ~~i~l~~~n~~a~~~y~k~--GF~~~~~~~~  170 (197)
T 3qb8_A          142 KYIYGDCTNIISQNMFEKH--GFETVGSVKY  170 (197)
T ss_dssp             CEEEEEECSHHHHHHHHHT--TCEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHC--CCeEEEEEEE
Confidence            9999988 44689999999  9999998763

>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*

Probab=99.29  E-value=1.2e-11  Score=100.16  Aligned_cols=83  Identities=18%  Similarity=0.133  Sum_probs=71.5

Q ss_pred             CCCCcEEEEEEeeecCCC--CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPAD--TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d--~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      .++|++||.+.+......  .....|..++|+|+|||+|+|+.|+.++++.+++.|++.|.+.+..   .|..||+|+  
T Consensus        60 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~--  137 (174)
T 3dr6_A           60 EENGVVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSL--  137 (174)
T ss_dssp             EETTEEEEEEEEEESSSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT--
T ss_pred             ecCCeEEEEEEEeecCCCCCcceEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhC--
Confidence            478999999998665442  2457899999999999999999999999999999999999988875   488999999  


Q ss_pred             CcEEEEeecc
Q 048173          135 DFASVAEVDT  144 (359)
Q Consensus       135 GF~~~~e~~~  144 (359)
                      ||+.+++...
T Consensus       138 Gf~~~~~~~~  147 (174)
T 3dr6_A          138 GFTVTAQMPQ  147 (174)
T ss_dssp             TCEEEEEEEE
T ss_pred             CCEEEEEccc
Confidence            9999887443

>3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1}

Probab=99.29  E-value=1e-11  Score=105.31  Aligned_cols=81  Identities=11%  Similarity=0.090  Sum_probs=70.0

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecc---ccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      .++|++||.+.+..... ...++|..++|+|+|||+|||+.|++++++.+++. |+++|.+.+..   .|..||+|+  |
T Consensus        78 ~~~g~ivG~~~~~~~~~-~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~--G  154 (182)
T 3kkw_A           78 VHDGQVLGFANFYQWQH-GDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQL--G  154 (182)
T ss_dssp             EETTEEEEEEEEEEEET-TTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHT--T
T ss_pred             EeCCeEEEEEEEEeecC-CceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHC--C
Confidence            47899999999765443 35799999999999999999999999999999999 89999887755   488899999  9


Q ss_pred             cEEEEeec
Q 048173          136 FASVAEVD  143 (359)
Q Consensus       136 F~~~~e~~  143 (359)
                      |+..+...
T Consensus       155 F~~~~~~~  162 (182)
T 3kkw_A          155 YQPRAIAE  162 (182)
T ss_dssp             CEEEEEEE
T ss_pred             CeEecccc
Confidence            99888643

>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A*

Probab=99.29  E-value=2.6e-12  Score=109.51  Aligned_cols=79  Identities=16%  Similarity=0.102  Sum_probs=70.6

Q ss_pred             CCCcEEEEEEeeecC----CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~----~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....    .+...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+......||+|+  ||
T Consensus       102 ~~g~ivG~~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~--GF  179 (190)
T 2vez_A          102 GEGRIVGTGSLVVERKFIHSLGMVGHIEDIAVEKGQQGKKLGLRIIQALDYVAEKVGCYKTILDCSEANEGFYIKC--GF  179 (190)
T ss_dssp             TTSCEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEECCCCGGGHHHHHHT--TC
T ss_pred             CCCcEEEEEEEEeccccccCCCceEEEEEEEEchhhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeccchHHHHHHC--CC
Confidence            479999999987642    244679999999999999999999999999999999999999999988889999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..++
T Consensus       180 ~~~~~  184 (190)
T 2vez_A          180 KRAGL  184 (190)
T ss_dssp             CCCCC
T ss_pred             eehHH
Confidence            97664

>1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1

Probab=99.29  E-value=1.5e-11  Score=103.81  Aligned_cols=103  Identities=21%  Similarity=0.278  Sum_probs=78.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      ++|++||.+.+...+ +..+++|..++|+|+|||+|+|+.|++++++.+++ .|++.+.+.....|..||+|+  ||+..
T Consensus        55 ~~~~ivG~~~~~~~~-~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~~g~~~l~v~~~n~a~~~y~k~--GF~~~  131 (164)
T 1ygh_A           55 KPLTVVGGITYRPFD-KREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQ--GFTKE  131 (164)
T ss_dssp             TTTEEEEEEEEEEEG-GGTEEEEEEEEECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHT--TCBSS
T ss_pred             CCCEEEEEEEEEEcC-CCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEecCChHHHHHHHc--CCEec
Confidence            688999999876653 33568899999999999999999999999999999 999966655555789999999  99977


Q ss_pred             EeecccCcccCcchhhhhhhcCCCCcEEEecccc
Q 048173          140 AEVDTEGRAGRLPLRQKFRKSTEPERVVIDGCSR  173 (359)
Q Consensus       140 ~e~~~~g~~~~~~~~~~m~K~l~~~~~m~~~l~~  173 (359)
                      +..+....       ....+...++.+|.+.+..
T Consensus       132 ~~~~~~~~-------~~~~~~~~~~~~m~~~l~~  158 (164)
T 1ygh_A          132 ITLDKSIW-------MGYIKDYEGGTLMQCSMLP  158 (164)
T ss_dssp             CCSCHHHH-------BTTBCCTTCCEEEEEECCC
T ss_pred             ceeccceE-------EEEEEEecCeEEEEeeccc
Confidence            75433100       0122223355899988863

>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1

Probab=99.29  E-value=3.7e-12  Score=101.38  Aligned_cols=79  Identities=6%  Similarity=-0.099  Sum_probs=69.5

Q ss_pred             CCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173           62 LGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      +|++||.+.+...+.   +...++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+..   .|..||+|+  |
T Consensus        57 ~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~--G  134 (153)
T 2eui_A           57 EDRLLGFCQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESI--G  134 (153)
T ss_dssp             SCCEEEEEEEEEEEETTTTEEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTT--T
T ss_pred             CCcEEEEEEEEecCCCCccCceEEEEEEEEcHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHc--C
Confidence            899999999865532   34779999999999999999999999999999999999999988875   489999999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+..++.
T Consensus       135 f~~~~~~  141 (153)
T 2eui_A          135 FREDQEF  141 (153)
T ss_dssp             CBCCCSB
T ss_pred             CEEeccc
Confidence            9977653

>3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus}

Probab=99.28  E-value=9.3e-12  Score=100.09  Aligned_cols=79  Identities=18%  Similarity=0.199  Sum_probs=71.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+....++...++|..++|+|+|||+|||+.|++++++.+++  +..|.+.+..   .|..||+|+  ||+
T Consensus        69 ~~~~~vG~~~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~ll~~~~~~~~~--~~~i~~~~~~~n~~a~~~y~~~--Gf~  144 (160)
T 3exn_A           69 LGQEPVGYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFAAGLDG--VRRLYAVVYGHNPKAKAFFQAQ--GFR  144 (160)
T ss_dssp             ETTEEEEEEEEEETCSSTTCEEEEEEEECGGGTTSSHHHHHHHHHHHTCTT--CCEEEEEEESSCHHHHHHHHHT--TCE
T ss_pred             ECCeEEEEEEeecccCCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHhh--CCeEEEEEeeCCHHHHHHHHHC--CCE
Confidence            589999999988876666789999999999999999999999999999999  8899888875   388999999  999


Q ss_pred             EEEeec
Q 048173          138 SVAEVD  143 (359)
Q Consensus       138 ~~~e~~  143 (359)
                      .+++..
T Consensus       145 ~~~~~~  150 (160)
T 3exn_A          145 YVKDGG  150 (160)
T ss_dssp             EEEECS
T ss_pred             EcccCC
Confidence            988744

>3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis}

Probab=99.28  E-value=1.8e-11  Score=102.91  Aligned_cols=79  Identities=15%  Similarity=0.153  Sum_probs=70.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+.....  +.++|..++|+|+|||+|+|+.|++++++.+++.|+++|.+.+..   .|..||+|+  ||+
T Consensus        83 ~~~~~vG~~~~~~~~~--~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~--Gf~  158 (187)
T 3pp9_A           83 LHNQIIGFIVLKKNWN--NYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKC--GFV  158 (187)
T ss_dssp             ETTEEEEEEEEEECTT--SCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT--TCE
T ss_pred             ECCeEEEEEEEEcCCC--CeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHC--CCE
Confidence            6899999999875444  669999999999999999999999999999999999999988875   489999999  999


Q ss_pred             EEEeec
Q 048173          138 SVAEVD  143 (359)
Q Consensus       138 ~~~e~~  143 (359)
                      ..+...
T Consensus       159 ~~~~~~  164 (187)
T 3pp9_A          159 IGGFDF  164 (187)
T ss_dssp             EEEEES
T ss_pred             EeceEe
Confidence            988633

>2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV}

Probab=99.28  E-value=4.3e-12  Score=102.71  Aligned_cols=78  Identities=13%  Similarity=0.029  Sum_probs=69.7

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.+....  ...++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+. .|..||+|+  ||+..+
T Consensus        52 ~~~~~vG~~~~~~~~--~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~-~a~~~y~k~--GF~~~~  126 (142)
T 2ozh_A           52 VDGRQVAFARVISDY--ATFAYLGDVFVLPEHRGRGYSKALMDAVMAHPDLQGLRRFSLATS-DAHGLYARY--GFTPPL  126 (142)
T ss_dssp             ETTEEEEEEEEEECS--SSEEEEEEEEECGGGTTSSHHHHHHHHHHHCGGGSSCSEEECCCS-SCHHHHHTT--TCCSCS
T ss_pred             ECCEEEEEEEEEecC--CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEecc-hHHHHHHHC--CCEEcC
Confidence            588999999876643  366999999999999999999999999999999999999999888 899999999  999877


Q ss_pred             eec
Q 048173          141 EVD  143 (359)
Q Consensus       141 e~~  143 (359)
                      +..
T Consensus       127 ~~~  129 (142)
T 2ozh_A          127 FPQ  129 (142)
T ss_dssp             SGG
T ss_pred             Ccc
Confidence            543

>1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1

Probab=99.28  E-value=2.1e-11  Score=102.83  Aligned_cols=80  Identities=20%  Similarity=0.170  Sum_probs=71.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+...  +.+.++|..++|+|+|||+|+|+.|++++++.+++.|+..|.+.+...   |..||+|+  ||+
T Consensus        46 ~~~~~vG~~~~~~~--~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~--GF~  121 (163)
T 1yvk_A           46 AGDELAGVYVLLKT--RPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKC--GFR  121 (163)
T ss_dssp             ETTEEEEEEEEEEC--STTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT--TCE
T ss_pred             ECCEEEEEEEEEec--CCCeEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEcCCCCHHHHHHHHHC--CCE
Confidence            68899999987654  446799999999999999999999999999999999999999988876   89999999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      ..+....
T Consensus       122 ~~~~~~~  128 (163)
T 1yvk_A          122 IQAIDHD  128 (163)
T ss_dssp             EEEEETT
T ss_pred             Eeceehh
Confidence            9886443

>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1

Probab=99.28  E-value=4.7e-12  Score=103.24  Aligned_cols=78  Identities=18%  Similarity=0.201  Sum_probs=64.4

Q ss_pred             CCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      ++|++||.+.+...+.   +...++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+..   .|..||+|+  
T Consensus        83 ~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~--  160 (168)
T 1bo4_A           83 DQEAVVGALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKL--  160 (168)
T ss_dssp             ETTEEEEEEEEEEEECSSSSCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC--
T ss_pred             ECCeEEEEEEEEeccCccCCCceEEEEEEEECHHHhcCCHHHHHHHHHHHHHHhCCCCEEEEEecCCChHHHHHHHHc--
Confidence            6899999998876542   34679999999999999999999999999999999999999998874   599999999  


Q ss_pred             CcEEEE
Q 048173          135 DFASVA  140 (359)
Q Consensus       135 GF~~~~  140 (359)
                      ||+..+
T Consensus       161 GF~~~g  166 (168)
T 1bo4_A          161 GIREEV  166 (168)
T ss_dssp             ------
T ss_pred             CCeecc
Confidence            999765

>3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} SCOP: d.108.1.0

Probab=99.28  E-value=1e-11  Score=100.47  Aligned_cols=79  Identities=15%  Similarity=0.146  Sum_probs=69.3

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .++|++||.+.+....  ...++|..++|+|+|||+|||+.|++++++.++  |++++.+.+..   .|..||+|+  ||
T Consensus        66 ~~~~~~vG~~~~~~~~--~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~--~~~~i~l~v~~~n~~a~~~y~k~--Gf  139 (163)
T 3fnc_A           66 EQADKVIGFANFIELE--KGKSELAAFYLLPEVTQRGLGTELLEVGMTLFH--VPLPMFVNVEKGNETAIHFYKAK--GF  139 (163)
T ss_dssp             EETTEEEEEEEEEEEE--TTEEEEEEEEECGGGCSSSHHHHHHHHHHHHTT--CCSSEEEEEETTCHHHHHHHHHT--TC
T ss_pred             EECCEEEEEEEEEeCC--CCcEEEEEEEECHHHhCCCHHHHHHHHHHHHhc--cCCEEEEEEeCCCHHHHHHHHHc--CC
Confidence            3689999999987665  466999999999999999999999999999998  99999888875   488999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +.+++...
T Consensus       140 ~~~~~~~~  147 (163)
T 3fnc_A          140 VQVEEFTE  147 (163)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEE
Confidence            99886443

>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile}

Probab=99.28  E-value=1.2e-11  Score=98.79  Aligned_cols=80  Identities=15%  Similarity=0.177  Sum_probs=68.6

Q ss_pred             CCCCcEEEEEEeeecC---CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEecc---ccHHHHhhc
Q 048173           60 LNLGKVVAAVIYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDK---ESSFFFLKQ  132 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~---~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~---~A~~Fw~K~  132 (359)
                      .++|++||.+.+....   .+...++|..++|+|+|||+|||+.|++++++.+++.| ++++.+.+..   .|..||+|+
T Consensus        61 ~~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~  140 (157)
T 3dsb_A           61 TVFDKVVAQIMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESL  140 (157)
T ss_dssp             EETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEEEEETTCTTHHHHHHTT
T ss_pred             EeCCcEEEEEEEEEeccccCCCceEEEEEEEECHHHhcCCHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHC
Confidence            3689999999985432   24466789999999999999999999999999999999 9999887766   489999999


Q ss_pred             ccCcEEEEe
Q 048173          133 VQDFASVAE  141 (359)
Q Consensus       133 ~~GF~~~~e  141 (359)
                        ||+..+.
T Consensus       141 --Gf~~~~~  147 (157)
T 3dsb_A          141 --NMYECDY  147 (157)
T ss_dssp             --TCEECSE
T ss_pred             --CCEEecc
Confidence              9998764

>2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: d.108.1.1

Probab=99.27  E-value=2.4e-11  Score=100.78  Aligned_cols=80  Identities=13%  Similarity=0.124  Sum_probs=68.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+...+.  ..++|..++|+|+|||+|+|+.|++++++.+++. |+++|.+.+..   .|..||+|+  ||
T Consensus        53 ~~~~~iG~~~~~~~~~--~~~~i~~~~v~~~~~g~Gig~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~--GF  128 (149)
T 2fl4_A           53 DGNQLIGYAMYGRWQD--GRVWLDRFLIDQRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQL--GF  128 (149)
T ss_dssp             ETTEEEEEEEEEECTT--SCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHT--TC
T ss_pred             ECCeEEEEEEEeecCC--CcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhCCCCEEEEEEECCCHHHHHHHHHC--CC
Confidence            5789999988765442  3477999999999999999999999999999975 79999999865   499999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +..+....
T Consensus       129 ~~~g~~~~  136 (149)
T 2fl4_A          129 VFNGELDT  136 (149)
T ss_dssp             EEEEEECT
T ss_pred             EEeccccc
Confidence            99887443

>2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A*

Probab=99.27  E-value=1.3e-11  Score=101.58  Aligned_cols=81  Identities=12%  Similarity=0.117  Sum_probs=71.7

Q ss_pred             CCCcEEEEEEeeecCC-CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecc---ccHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      ++|++||.+.+..... +...++|..++|+|+|||+|||+.|+.++++.+++. |++.|.+.+..   .|..||+|+  |
T Consensus        52 ~~~~~vG~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~--G  129 (170)
T 2ob0_A           52 FNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKF--G  129 (170)
T ss_dssp             ETTEEEEEEEEEEEEETTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHCCCSEEEEEEETTCHHHHHHHHHT--T
T ss_pred             ECCeEEEEEEEEEEecCCCcEEEEEEEEECHHHcCcCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHc--C
Confidence            5899999999866543 335799999999999999999999999999999998 99999998877   589999999  9


Q ss_pred             cEEEEeec
Q 048173          136 FASVAEVD  143 (359)
Q Consensus       136 F~~~~e~~  143 (359)
                      |+..++..
T Consensus       130 F~~~~~~~  137 (170)
T 2ob0_A          130 FEIIETKK  137 (170)
T ss_dssp             CEEEEEET
T ss_pred             CEEeEeee
Confidence            99988744

>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}

Probab=99.27  E-value=1.2e-11  Score=103.74  Aligned_cols=80  Identities=18%  Similarity=0.116  Sum_probs=70.7

Q ss_pred             CCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcc
Q 048173           60 LNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQV  133 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~  133 (359)
                      .++|+|||.+.+.....   ....++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+...   |..||+|+ 
T Consensus        80 ~~~g~ivG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~-  158 (183)
T 3i9s_A           80 VEHDKVLGFATYTIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSI-  158 (183)
T ss_dssp             EETTEEEEEEEEEEESCCGGGCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHT-
T ss_pred             EECCEEEEEEEEEEecCCCCCCCeEEEEeEEECHhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCChHHHHHHHHc-
Confidence            47899999999876644   246789999999999999999999999999999999999998888654   89999999 


Q ss_pred             cCcEEEEe
Q 048173          134 QDFASVAE  141 (359)
Q Consensus       134 ~GF~~~~e  141 (359)
                       ||+.+++
T Consensus       159 -GF~~~~~  165 (183)
T 3i9s_A          159 -GASLIRE  165 (183)
T ss_dssp             -TCEECTT
T ss_pred             -CCceecc
Confidence             9998774

>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1

Probab=99.27  E-value=2.3e-11  Score=100.98  Aligned_cols=80  Identities=15%  Similarity=0.158  Sum_probs=69.0

Q ss_pred             CCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      ++|++||.+.+.....  ....++| .++|+|+|||+|+|+.|++++++.+++.|+++|.+.+..   .|..||+|+  |
T Consensus        65 ~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~--G  141 (170)
T 2ge3_A           65 ADGDVIGWCDIRRQDRATRAHCGTL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKI--G  141 (170)
T ss_dssp             ETTEEEEEEEEEECCSTTTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHH--T
T ss_pred             ECCEEEEEEEEecccccCCCceEEE-EEEECHHHhCCCHHHHHHHHHHHHHHHCCceEEEEEEEcCCHHHHHHHHHC--C
Confidence            6899999998876543  2356777 799999999999999999999999999999999998876   499999999  9


Q ss_pred             cEEEEeec
Q 048173          136 FASVAEVD  143 (359)
Q Consensus       136 F~~~~e~~  143 (359)
                      |+..+...
T Consensus       142 F~~~~~~~  149 (170)
T 2ge3_A          142 FAHEGRAR  149 (170)
T ss_dssp             CEEEEEEE
T ss_pred             CEEEeEec
Confidence            99887643

>2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1

Probab=99.26  E-value=1.6e-12  Score=103.11  Aligned_cols=84  Identities=17%  Similarity=0.124  Sum_probs=68.2

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||.+.+...  +...++|..++|+|+|||+|+|+.|++++++.+++.|+..+.+..+..|..||+|+  ||+..
T Consensus        48 ~~~~~~vG~~~~~~~--~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~l~~~~n~~a~~~y~k~--Gf~~~  123 (138)
T 2atr_A           48 LDGDAVVGLIRLVGD--GFSSVFVQDLIVLPSYQRQGIGSSLMKEALGNFKEAYQVQLATEETEKNVGFYRSM--GFEIL  123 (138)
T ss_dssp             EETTEEEEEEEEEEC--SSSEEEEEEEEECTTSCSSSHHHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHHT--TCCCG
T ss_pred             EECCeeEEEEEEEeC--CCCeEEEEEEEEchhhcCCCHHHHHHHHHHHHHHhcCeEEEEeCCChHHHHHHHHc--CCccc
Confidence            368999999987543  33679999999999999999999999999999999998433332255699999999  99988


Q ss_pred             EeecccCc
Q 048173          140 AEVDTEGR  147 (359)
Q Consensus       140 ~e~~~~g~  147 (359)
                      ++....+.
T Consensus       124 ~~~~~~~~  131 (138)
T 2atr_A          124 STYDCTGM  131 (138)
T ss_dssp             GGGTCCCC
T ss_pred             ceecceee
Confidence            77555443

>1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1

Probab=99.26  E-value=3.4e-11  Score=99.03  Aligned_cols=80  Identities=16%  Similarity=0.152  Sum_probs=71.0

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+...  +...++|..++|+|+|||+|+|+.|++++++.+++.|+..|.+.+...   |..||+|+  ||+
T Consensus        44 ~~~~~vG~~~~~~~--~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~--Gf~  119 (157)
T 1y9k_A           44 QGGSVIGVYVLLET--RPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKC--GFR  119 (157)
T ss_dssp             CSSSEEEEEEEEEC--STTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT--TCE
T ss_pred             ECCEEEEEEEEEcC--CCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHHC--CCE
Confidence            68899999987543  446799999999999999999999999999999999999999888764   89999999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      ..++...
T Consensus       120 ~~~~~~~  126 (157)
T 1y9k_A          120 IFSIDFD  126 (157)
T ss_dssp             EEEEETT
T ss_pred             Eeccccc
Confidence            9887544

>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1

Probab=99.26  E-value=9.2e-12  Score=102.53  Aligned_cols=79  Identities=15%  Similarity=0.121  Sum_probs=70.0

Q ss_pred             CC-CcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc--ccHHHHhhccc
Q 048173           61 NL-GKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK--ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~-g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~--~A~~Fw~K~~~  134 (359)
                      ++ |++||.+.+.....   +...++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+..  .|..||+|+  
T Consensus        68 ~~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~--  145 (158)
T 1vkc_A           68 NERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEER--  145 (158)
T ss_dssp             ETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHT--
T ss_pred             cCCCcEEEEEEEEEeccccCCCCEEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCcEEEEEEeCCCcHHHHHHHC--
Confidence            45 89999999877543   55789999999999999999999999999999999999999997654  689999999  


Q ss_pred             CcEEEEe
Q 048173          135 DFASVAE  141 (359)
Q Consensus       135 GF~~~~e  141 (359)
                      ||+..+.
T Consensus       146 GF~~~~~  152 (158)
T 1vkc_A          146 GYKARAL  152 (158)
T ss_dssp             TCCCCCC
T ss_pred             CCEeeEE
Confidence            9997664

>3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}

Probab=99.26  E-value=3.3e-11  Score=99.93  Aligned_cols=79  Identities=8%  Similarity=0.035  Sum_probs=70.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+...+ +...++|..++|+|+|||+|+|+.|++++++.+++ .|+++|.+.+..   .|..||+|+  ||
T Consensus        75 ~~~~~vG~~~~~~~~-~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~--GF  151 (188)
T 3owc_A           75 RDDQVIGHCQLLFDR-RNGVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRA--GF  151 (188)
T ss_dssp             ETTEEEEEEEEEEET-TTTEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHHSTTCCEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             ECCcEEEEEEEEecC-CCCEEEEEEEEEcHHHhCCChhHHHHHHHHHHHHHhhCceEEEEEEecCCHHHHHHHHHc--CC
Confidence            589999999988663 44679999999999999999999999999999999 599999998865   488999999  99


Q ss_pred             EEEEee
Q 048173          137 ASVAEV  142 (359)
Q Consensus       137 ~~~~e~  142 (359)
                      +.++..
T Consensus       152 ~~~~~~  157 (188)
T 3owc_A          152 REEGLR  157 (188)
T ss_dssp             EEEEEE
T ss_pred             EEeeeE
Confidence            998864

>3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans}

Probab=99.26  E-value=6.7e-12  Score=103.23  Aligned_cols=74  Identities=18%  Similarity=0.196  Sum_probs=65.2

Q ss_pred             CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEEe
Q 048173           62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAE  141 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e  141 (359)
                      +|++||.+.+..  .+...++|..++|+|+|||+|||+.|++++++.++  +...+.+.++..|..||+|+  ||+..++
T Consensus        57 ~~~~vG~~~~~~--~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~--~~~~~~l~~~~~a~~fY~k~--GF~~~~~  130 (145)
T 3s6f_A           57 DGQVIGFVNALS--DGILAASIPLLEVQAGWRSLGLGSELMRRVLTELG--DLYMVDLSCDDDVVPFYERL--GLKRANA  130 (145)
T ss_dssp             TCCEEEEEEEEE--CSSSEEECCCEEECTTSCSSSHHHHHHHHHHHHHC--SCSEEECCCCGGGHHHHHHT--TCCCCCC
T ss_pred             CCCEEEEEEEEe--cCCcEEEEEEEEECHHHhcCcHHHHHHHHHHHHhc--CCCeEEEEECHHHHHHHHHC--CCEECCc
Confidence            799999998653  33367899999999999999999999999999996  67788888888999999999  9998664

>3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0

Probab=99.26  E-value=3.1e-11  Score=99.37  Aligned_cols=80  Identities=13%  Similarity=0.112  Sum_probs=70.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....+....++|. ++|+|+|||+|+|+.|++++++.+++. |+++|.+.+..   .|..||+|+  ||
T Consensus        66 ~~~~~vG~~~~~~~~~~~~~~~~~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~--GF  142 (176)
T 3eg7_A           66 AQKNLIGLVELIEINYIHRSAEFQ-IIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEEC--GF  142 (176)
T ss_dssp             TTCCEEEEEEEEEEETTTTEEEEE-EEECGGGTTSSCHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             cCCCEEEEEEEEecCcccCceEEE-EEECHHHhCCCHHHHHHHHHHHHHHHhCCccEEEEEehhcCHHHHHHHHHC--CC
Confidence            789999999988776656678786 899999999999999999999999884 99999988876   388899999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +..+...
T Consensus       143 ~~~~~~~  149 (176)
T 3eg7_A          143 VEEGHLV  149 (176)
T ss_dssp             EEEEEEE
T ss_pred             EEeeeeh
Confidence            9988743

>4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A

Probab=99.26  E-value=5.1e-11  Score=104.58  Aligned_cols=66  Identities=17%  Similarity=0.163  Sum_probs=58.8

Q ss_pred             CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-ccHHHHhhcccCcEEEEeeccc
Q 048173           78 TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-ESSFFFLKQVQDFASVAEVDTE  145 (359)
Q Consensus        78 ~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~K~~~GF~~~~e~~~~  145 (359)
                      ....+|..++|+|+|||+|||+.|++++++.+++.|++.+.+.+.. .|..||+|+  ||+.+++.+-.
T Consensus       128 ~~~~~i~~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~--Gf~~~~~~~~~  194 (222)
T 4fd5_A          128 DKIFEIRILSVDSRFRGKGLAKKLIEKSEELALDRGFQVMKTDATGAFSQRVVSSL--GFITKCEINYT  194 (222)
T ss_dssp             SEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHT--TCEEEEEEEGG
T ss_pred             CcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHC--CCEEEEEEchh
Confidence            3678899999999999999999999999999999999998776654 589999999  99999986653

>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}

Probab=99.25  E-value=6.4e-12  Score=104.68  Aligned_cols=80  Identities=11%  Similarity=0.089  Sum_probs=66.8

Q ss_pred             CCCCcEEEEEEeeecC---CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173           60 LNLGKVVAAVIYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV  133 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~---~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~  133 (359)
                      .++|++||.+.+...+   .+.+.++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+..   .|..||+|+ 
T Consensus        77 ~~~~~ivG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~-  155 (176)
T 3fyn_A           77 AEGTESVGYIVLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETGPEDHPARGVYSRA-  155 (176)
T ss_dssp             EETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEECCCC--------HHHHT-
T ss_pred             EECCEEEEEEEEEeccccccCCceEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHC-
Confidence            3689999999987633   244689999999999999999999999999999999999999888874   589999999 


Q ss_pred             cCcEEEEe
Q 048173          134 QDFASVAE  141 (359)
Q Consensus       134 ~GF~~~~e  141 (359)
                       ||+.+++
T Consensus       156 -GF~~~~~  162 (176)
T 3fyn_A          156 -GFEESGR  162 (176)
T ss_dssp             -TCCCCCC
T ss_pred             -CCeeccc
Confidence             9998776

>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}

Probab=99.25  E-value=2.6e-11  Score=102.79  Aligned_cols=83  Identities=16%  Similarity=0.113  Sum_probs=66.8

Q ss_pred             cCCCCcEEEEEEeeecCCC-CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEE-e---ccccHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIVPAD-TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW-D---DKESSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d-~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~-a---~~~A~~Fw~K~~  133 (359)
                      ...+|+|||.+.+....+. .....+..++|+|+|||+|||+.|++++++.|++.|++++.+. +   +..|..||+|+ 
T Consensus        66 ~~~dg~ivG~~~~~~~~~~~~~~~~~~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~-  144 (173)
T 4h89_A           66 VDADGTVLGSANMYPNRPGPGAHVASASFMVAAAARGRGVGRALCQDMIDWAGREGFRAIQFNAVVETNTVAVKLWQSL-  144 (173)
T ss_dssp             ECTTCCEEEEEEEEESSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEEETTCHHHHHHHHHT-
T ss_pred             EEeCCeEEEEEEEEecCCCCCceEEEEeeEEEEeeccchHHHHHHHHHHHHHHHCCCcEEEEeeecccCHHHHHHHHHC-
Confidence            3478999999987765442 2233456789999999999999999999999999999998653 2   23489999999 


Q ss_pred             cCcEEEEeec
Q 048173          134 QDFASVAEVD  143 (359)
Q Consensus       134 ~GF~~~~e~~  143 (359)
                       ||+.++..+
T Consensus       145 -GF~~~G~~~  153 (173)
T 4h89_A          145 -GFRVIGTVP  153 (173)
T ss_dssp             -TCEEEEEEE
T ss_pred             -CCEEEEEEc
Confidence             999988644

>1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1

Probab=99.25  E-value=1.3e-11  Score=102.85  Aligned_cols=79  Identities=16%  Similarity=0.130  Sum_probs=70.0

Q ss_pred             CC-CcEEEEEEeeecCCC-CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173           61 NL-GKVVAAVIYQIVPAD-TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~-g~IVgvi~l~i~~~d-~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      ++ |++||.+.+...+.. ...++|..++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+  |
T Consensus        91 ~~~~~~vG~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~--G  168 (180)
T 1ufh_A           91 LNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQT--G  168 (180)
T ss_dssp             SSSSCEEEEEEEEECTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHT--T
T ss_pred             cCCCCEEEEEEEEecCCCCCCcEEEEEEEECHhhcCCChHHHHHHHHHHHHHHCCCCEEEEEeccCcHHHHHHHHHC--C
Confidence            45 999999998876642 4679999999999999999999999999999999999999999865   499999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      |+..+.
T Consensus       169 F~~~~~  174 (180)
T 1ufh_A          169 FQETDV  174 (180)
T ss_dssp             CCCCCC
T ss_pred             CEEeee
Confidence            997654

>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}

Probab=99.25  E-value=2.1e-11  Score=99.16  Aligned_cols=76  Identities=22%  Similarity=0.162  Sum_probs=67.3

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .++|++||.+.+.    +  .++| .++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+  ||
T Consensus        60 ~~~~~~vG~~~~~----~--~~~~-~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~--GF  130 (160)
T 3f8k_A           60 EVDGKVVGEASLH----K--DGEF-SLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKL--GF  130 (160)
T ss_dssp             EETTEEEEEEEEE----T--TSBE-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHH--TC
T ss_pred             EECCeEEEEEEee----c--ceEE-EEEECHHHcCCCHHHHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHc--CC
Confidence            3789999999977    2  4667 899999999999999999999999999999999998876   488999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +.+++.+.
T Consensus       131 ~~~~~~~~  138 (160)
T 3f8k_A          131 KMRFYEDE  138 (160)
T ss_dssp             EEEECSSC
T ss_pred             EEEeeccc
Confidence            99886444

>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1

Probab=99.25  E-value=1.6e-11  Score=99.61  Aligned_cols=80  Identities=14%  Similarity=0.075  Sum_probs=67.5

Q ss_pred             CCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173           60 LNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV  133 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~  133 (359)
                      .++|++||.+.+...+.   +...++|..++|+|+|||+|||+.|+.++++.+++.|+++|.+.+..   .|..||+|+ 
T Consensus        65 ~~~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~-  143 (166)
T 2fe7_A           65 LSEGRPIGYAVFFYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSI-  143 (166)
T ss_dssp             EETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT-
T ss_pred             EeCCeEEEEEEEEeccCCcccCCcEEEEEEEECccccCccHHHHHHHHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHc-
Confidence            36899999998876422   34568999999999999999999999999999999999999888776   489999999 


Q ss_pred             cCcEEEEe
Q 048173          134 QDFASVAE  141 (359)
Q Consensus       134 ~GF~~~~e  141 (359)
                       ||+.+++
T Consensus       144 -Gf~~~~~  150 (166)
T 2fe7_A          144 -GALPQDE  150 (166)
T ss_dssp             -TCEECTT
T ss_pred             -CCeEccc
Confidence             9998765

>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5

Probab=99.24  E-value=3e-11  Score=102.70  Aligned_cols=83  Identities=24%  Similarity=0.326  Sum_probs=66.0

Q ss_pred             CCCceEEEEcccCcch--HHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhh-cc---cccCHHHHHHHHhCCCCC
Q 048173          249 NGKCFRITLMNIADDS--KKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTA-LS---WIVSPSWLKESFGEGRFV  321 (359)
Q Consensus       249 ~~~~prI~fSgl~~e~--kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~A-Ia---wIVsp~WL~eS~k~g~fl  321 (359)
                      --++.+|.|+|+....  ...++++.+||.++.+ .+.|||||+++...+++-..+ ..   +||+|+||.+|+++|+++
T Consensus        40 lF~g~~i~i~G~~~~~~~~L~~~i~~~Gg~v~~~l~~~vTHvI~~~~~~~~~~~~~~~~~~~~iV~~~Wv~dsi~~~~ll  119 (132)
T 1wf6_A           40 LLDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPHVVGAKWLLECFSKGYML  119 (132)
T ss_dssp             TTTTCEEEEESCCSHHHHHHHHHHHHTTCEEESSCCSSCCEEEESSCCSHHHHHHHHSCCCCCEEEHHHHHHHHHHSSCC
T ss_pred             ccCCEEEEEECCChHHHHHHHHHHHHCCCEEeCcCCCCCeEEEECCchHHHHHHHHhhCCCCeEechHHHHHHHHcCCcC
Confidence            3466789999996542  2347789999999887 689999999976556554333 22   999999999999999999


Q ss_pred             CCCcceecCc
Q 048173          322 DESFYMLNDD  331 (359)
Q Consensus       322 DEe~Y~L~D~  331 (359)
                      ||++|.+.++
T Consensus       120 ~e~~Y~~~~~  129 (132)
T 1wf6_A          120 SEEPYIHSGP  129 (132)
T ss_dssp             CSGGGBCCCS
T ss_pred             CHhhccCCCC
Confidence            9999988765

>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae}

Probab=99.23  E-value=4.8e-11  Score=99.80  Aligned_cols=79  Identities=16%  Similarity=0.224  Sum_probs=67.3

Q ss_pred             CCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEecc---ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      ++|++||.+.++....  ....++| .++|+|+|||+|+|+.|++++++.+++.| +++|.+.+..   .|..||+|+  
T Consensus        66 ~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~A~~~yek~--  142 (172)
T 2i79_A           66 LNGKIAGIVNITADQRKRVRHIGDL-FIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKH--  142 (172)
T ss_dssp             ETTEEEEEEEEECCCSTTTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSSCCEEEEEEETTCHHHHHHHHHT--
T ss_pred             ECCEEEEEEEEEecCCCccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHC--
Confidence            6789999998775442  2345666 48999999999999999999999999999 9999998876   499999999  


Q ss_pred             CcEEEEee
Q 048173          135 DFASVAEV  142 (359)
Q Consensus       135 GF~~~~e~  142 (359)
                      ||+..+..
T Consensus       143 GF~~~g~~  150 (172)
T 2i79_A          143 GFVIEGSQ  150 (172)
T ss_dssp             TCEEEEEE
T ss_pred             CCEEEeEE
Confidence            99988853

>1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1

Probab=99.23  E-value=3e-11  Score=96.72  Aligned_cols=77  Identities=14%  Similarity=0.157  Sum_probs=65.4

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE--EEEeccccHHHHhhcccCcEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI--FCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I--~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      ++|++||.+.+....  ...++|..++|+|+|||+|+|+.|++++++.+++.|++.+  .+.++..|..||+|+  ||+.
T Consensus        46 ~~~~~vG~~~~~~~~--~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~~~~~~~~n~~a~~~y~k~--Gf~~  121 (133)
T 1y7r_A           46 DKDRLIGMGRVIGDG--GTVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKF--GFMP  121 (133)
T ss_dssp             ETTEEEEEEEEEECS--SSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTT--TCEE
T ss_pred             ECCEEEEEEEEEccC--CCeEEEEEEEEcHHHhcCchHHHHHHHHHHHHHHcCCCEEEEEEeCCchHHHHHHHc--CCeE
Confidence            688999998875433  3568999999999999999999999999999999997654  445566689999999  9998


Q ss_pred             EEe
Q 048173          139 VAE  141 (359)
Q Consensus       139 ~~e  141 (359)
                      .++
T Consensus       122 ~~~  124 (133)
T 1y7r_A          122 TEP  124 (133)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            764

>2qec_A Histone acetyltransferase HPA2 and related acetyltransferases; NP_600742.1, acetyltransferase (GNAT) family; 1.90A {Corynebacterium glutamicum atcc 13032}

Probab=99.23  E-value=3.7e-11  Score=100.01  Aligned_cols=63  Identities=16%  Similarity=0.112  Sum_probs=54.8

Q ss_pred             CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-ccHHHHhhcccCcEEEEeecc
Q 048173           77 DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-ESSFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus        77 d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~K~~~GF~~~~e~~~  144 (359)
                      +...++|..++|+|+|||+|||+.|++++++.+++.   .+.+.+.. .|..||+|+  ||+.+++...
T Consensus       122 ~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~---~~~v~~~n~~a~~~y~k~--GF~~~~~~~~  185 (204)
T 2qec_A          122 KFPHWYLYTVATSSSARGTGVGSALLNHGIARAGDE---AIYLEATSTRAAQLYNRL--GFVPLGYIPS  185 (204)
T ss_dssp             SSCCEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTS---CEEEEESSHHHHHHHHHT--TCEEEEEECC
T ss_pred             CCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHhhhC---CeEEEecCccchHHHHhc--CCeEeEEEEc
Confidence            345678999999999999999999999999999988   66666654 699999999  9999987654

>1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.23  E-value=2.4e-11  Score=101.29  Aligned_cols=76  Identities=17%  Similarity=0.165  Sum_probs=67.5

Q ss_pred             CcEEEEEEeeecCC-CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEE
Q 048173           63 GKVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFAS  138 (359)
Q Consensus        63 g~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~  138 (359)
                      |++||.+.+...+. ....++|..++|+|+|||+|+|+.|++++++.+++.|+++|.+.+..   .|..||+|+  ||+.
T Consensus        70 ~~~iG~~~~~~~~~~~~~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~--GF~~  147 (158)
T 1on0_A           70 KDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQT--GFQE  147 (158)
T ss_dssp             SCEEEEEEEEECTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCCEEEECCCTTCHHHHHHHHHT--TCCC
T ss_pred             CCceEEEEEEecCCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHC--CCEE
Confidence            89999998877543 23568899999999999999999999999999999999999999875   499999999  9996


Q ss_pred             EE
Q 048173          139 VA  140 (359)
Q Consensus       139 ~~  140 (359)
                      .+
T Consensus       148 ~g  149 (158)
T 1on0_A          148 TD  149 (158)
T ss_dssp             CC
T ss_pred             Ee
Confidence            65

>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*

Probab=99.23  E-value=5.1e-11  Score=98.73  Aligned_cols=78  Identities=22%  Similarity=0.257  Sum_probs=69.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+...+   +.++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+..   .|..||+|+  ||+
T Consensus        47 ~~~~~vG~~~~~~~~---~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~--GF~  121 (160)
T 2cnt_A           47 ADDRMAAFAITQVVL---DEATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESL--GFN  121 (160)
T ss_dssp             ETTEEEEEEEEEEET---TEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHH--TCE
T ss_pred             ECCeEEEEEEEEecC---CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHC--CCE
Confidence            689999999976543   358899999999999999999999999999999999999988765   489999999  999


Q ss_pred             EEEeec
Q 048173          138 SVAEVD  143 (359)
Q Consensus       138 ~~~e~~  143 (359)
                      ..+...
T Consensus       122 ~~~~~~  127 (160)
T 2cnt_A          122 EATIRR  127 (160)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            988643

>3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822}

Probab=99.23  E-value=8.2e-12  Score=106.00  Aligned_cols=79  Identities=18%  Similarity=0.069  Sum_probs=71.3

Q ss_pred             C-CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 N-LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~-~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      + +|+|||.+.+...+.+...++|..++|+|+|||+|||+.|++++++.+++.|+..|.+.+..   .|..||+|+  ||
T Consensus        74 ~~~g~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~--Gf  151 (189)
T 3d3s_A           74 SPGGRIDGFVSAYLLPTRPDVLFVWQVAVHSRARGHRLGRAMLGHILERQECRHVRHLETTVGPDNQASRRTFAGL--AG  151 (189)
T ss_dssp             CTTSCEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHHSGGGTTCCEEEEEECTTCHHHHHHHHHH--HH
T ss_pred             CCCCEEEEEEEEEEcCCCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHc--CC
Confidence            5 89999999988877766789999999999999999999999999999999999999888877   489999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..++
T Consensus       152 ~~~~~  156 (189)
T 3d3s_A          152 ERGAH  156 (189)
T ss_dssp             TTTCE
T ss_pred             ccccc
Confidence            85444

>1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1

Probab=99.23  E-value=4.9e-11  Score=101.02  Aligned_cols=81  Identities=7%  Similarity=-0.026  Sum_probs=72.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....++...++|..++|+|+|||+|+|+.++.++++.+++ .|+++|.+.+...   |..||+|+  ||
T Consensus        77 ~~~~~iG~~~~~~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~--GF  154 (197)
T 1yre_A           77 LGVQLVGTTRFAEFLPALPACEIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKL--GA  154 (197)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHH--TC
T ss_pred             ECCeEEEEEEEEeecCCcCeeEEEEEEECHhHhcCCHHHHHHHHHHHHHHhhcCccEEEEEEcCCCHHHHHHHHHc--CC
Confidence            789999999987666666789999999999999999999999999999999 8999998888763   88999999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +..+...
T Consensus       155 ~~~g~~~  161 (197)
T 1yre_A          155 QREGVLR  161 (197)
T ss_dssp             EEEEEEE
T ss_pred             eeeeeec
Confidence            9988644

>3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A*

Probab=99.22  E-value=5.4e-11  Score=104.20  Aligned_cols=65  Identities=15%  Similarity=0.152  Sum_probs=58.4

Q ss_pred             eeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec-cccHHHHhhcccCcEEEEeecccC
Q 048173           80 YAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD-KESSFFFLKQVQDFASVAEVDTEG  146 (359)
Q Consensus        80 ~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~-~~A~~Fw~K~~~GF~~~~e~~~~g  146 (359)
                      +.+|..++|+|+|||+|||+.|++++++.+++.|++.+.+.+. ..|..||+|+  ||+.+++.+-.+
T Consensus       125 ~~~i~~~~v~p~~rg~Gig~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~--Gf~~~~~~~~~~  190 (215)
T 3te4_A          125 ILDGKILSVDTNYRGLGIAGRLTERAYEYMRENGINVYHVLCSSHYSARVMEKL--GFHEVFRMQFAD  190 (215)
T ss_dssp             EEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHT--TCEEEEEECGGG
T ss_pred             EEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHHHHHC--CCEEEEEEEhhh
Confidence            8999999999999999999999999999999999999976664 3589999999  999999876533

>2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1

Probab=99.22  E-value=4.2e-11  Score=101.96  Aligned_cols=81  Identities=17%  Similarity=0.286  Sum_probs=69.9

Q ss_pred             CCCcEEEEEEeee-cCC------------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEE-eccccH
Q 048173           61 NLGKVVAAVIYQI-VPA------------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW-DDKESS  126 (359)
Q Consensus        61 ~~g~IVgvi~l~i-~~~------------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~-a~~~A~  126 (359)
                      ++|++||++.+.. ...            +...++|..++|+|+|||+|+|+.|+.++++.+++.|++.|.+. .+..|.
T Consensus        74 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~  153 (190)
T 2gan_A           74 KDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVTFPNLEAY  153 (190)
T ss_dssp             ESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCEEEEEECGGGSHH
T ss_pred             ECCEEEEEEEEEecccccccccccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecCCcccc
Confidence            5789999999876 332            33479999999999999999999999999999999999999886 444689


Q ss_pred             HH-HhhcccCcEEEEeec
Q 048173          127 FF-FLKQVQDFASVAEVD  143 (359)
Q Consensus       127 ~F-w~K~~~GF~~~~e~~  143 (359)
                      .| |+|+  ||+..++..
T Consensus       154 ~~~y~k~--GF~~~~~~~  169 (190)
T 2gan_A          154 SYYYMKK--GFREIMRYK  169 (190)
T ss_dssp             HHHHHTT--TEEEEECCT
T ss_pred             ccEEecC--CCEEeeccc
Confidence            99 9999  999988644

>3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0

Probab=99.22  E-value=7.2e-11  Score=97.87  Aligned_cols=80  Identities=19%  Similarity=0.170  Sum_probs=69.0

Q ss_pred             CCCcEEEEEEeeecCC-CCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      ++|++||.+.+..... ....++|. ++|+|+|||+|+|+.|+.++++.+ ++.|+++|.+.+...   |..||+|+  |
T Consensus        76 ~~~~~vG~~~~~~~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~--G  152 (184)
T 3igr_A           76 NEHKIIGTVSYSNITRFPFHAGHVG-YSLDSEYQGKGIMRRAVNVTIDWMFKAQNLHRIMAAYIPRNEKSAKVLAAL--G  152 (184)
T ss_dssp             TTTEEEEEEEEEEEECTTTCEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHT--T
T ss_pred             CCCeEEEEEEeeecccccCceEEEE-EEEChhhccCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHc--C
Confidence            5889999998875554 34567777 689999999999999999999999 789999999998874   99999999  9


Q ss_pred             cEEEEeec
Q 048173          136 FASVAEVD  143 (359)
Q Consensus       136 F~~~~e~~  143 (359)
                      |+..+...
T Consensus       153 F~~~g~~~  160 (184)
T 3igr_A          153 FVKEGEAK  160 (184)
T ss_dssp             CEEEEEEE
T ss_pred             CEeeeeeh
Confidence            99988643

>3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, acetyltransferas protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis}

Probab=99.21  E-value=5.9e-11  Score=97.87  Aligned_cols=83  Identities=17%  Similarity=0.133  Sum_probs=69.6

Q ss_pred             CCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecc---ccHHHHhh
Q 048173           61 NLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDK---ESSFFFLK  131 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~K  131 (359)
                      ++|++||.+.+....+     ....++|. ++|+|+|||+|+|+.|+.++++.+++. |+++|.+.+..   .|..||+|
T Consensus        74 ~~g~~vG~~~~~~~~~~~~~~~~~~~~~~-~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k  152 (175)
T 3juw_A           74 VSGEMRGEAGFQFRRRGFGPGFDNHPEAA-WAVASAHQGRGLAAEAMQALLAHHDRSSGRQRVVALIARSNLPSLRLAER  152 (175)
T ss_dssp             TTCCEEEEEEEECCCCSSCTTTTTSCEEE-EEECGGGTTSSHHHHHHHHHHHHHHHHHTSCCEEEEEETTCHHHHHHHHH
T ss_pred             CCCcEEEEeeeEEeeccccCCCCCCceEE-EEECHHHhCCCHHHHHHHHHHHHHHhCCCCceEEEEECCCChhHHHHHHH
Confidence            5899999999877432     22456565 799999999999999999999999985 99999988887   48999999


Q ss_pred             cccCcEEEEeecccC
Q 048173          132 QVQDFASVAEVDTEG  146 (359)
Q Consensus       132 ~~~GF~~~~e~~~~g  146 (359)
                      +  ||+.+++....|
T Consensus       153 ~--GF~~~~~~~~~g  165 (175)
T 3juw_A          153 L--GFRGYSDVAFDG  165 (175)
T ss_dssp             T--TCEEEEEEEETT
T ss_pred             c--CCeEecceeeCC
Confidence            9  999999866544

>3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii}

Probab=99.21  E-value=8.8e-11  Score=96.41  Aligned_cols=80  Identities=15%  Similarity=0.071  Sum_probs=69.4

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....+....++|. ++|+|+|||+|+|+.|+.++++.+.+ .|+++|.+.+...   |..||+|+  ||
T Consensus        65 ~~~~~vG~~~~~~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~--GF  141 (170)
T 3tth_A           65 LKDNKVGLVELTEIDFIHRRCEFA-IIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKS--GF  141 (170)
T ss_dssp             TTCCEEEEEEEEEEETTTTEEEEE-EEECTTSCSSCSHHHHHHHHHHHHHHTSCCCEEEEEEETTCHHHHHHHHTT--TC
T ss_pred             CCCCEEEEEEEEecccccceEEEE-EEECccccCCCHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHC--CC
Confidence            789999999887766655678775 69999999999999999999999966 5999999888764   89999999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +..+...
T Consensus       142 ~~~g~~~  148 (170)
T 3tth_A          142 AEEGKLV  148 (170)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEE
Confidence            9988633

>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1

Probab=99.21  E-value=1.4e-11  Score=102.33  Aligned_cols=77  Identities=14%  Similarity=0.163  Sum_probs=53.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+...+ +...++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+..   .|..||+|+  ||+
T Consensus        72 ~~~~~vG~~~~~~~~-~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~--GF~  148 (159)
T 2aj6_A           72 NEGQLIAFIWGHFSN-EKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISNTIHKNNLPMISLNKDL--GYQ  148 (159)
T ss_dssp             ETTEEEEEEEEEEET-TTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCCCCC--------------------
T ss_pred             ECCeEEEEEEEEeec-CCCEEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCcEEEEEeccCCHHHHHHHHHC--CCE
Confidence            679999999987654 34579999999999999999999999999999999999999777664   499999999  999


Q ss_pred             EEE
Q 048173          138 SVA  140 (359)
Q Consensus       138 ~~~  140 (359)
                      ..+
T Consensus       149 ~~~  151 (159)
T 2aj6_A          149 VSH  151 (159)
T ss_dssp             ---
T ss_pred             Eee
Confidence            766

>1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A

Probab=99.21  E-value=7.6e-11  Score=96.97  Aligned_cols=80  Identities=10%  Similarity=0.061  Sum_probs=70.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....+....++|. ++|+|+|||+|+|+.|++++++.+++ .|+++|.+.+...   |..||+|+  ||
T Consensus        77 ~~~~~vG~~~~~~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~--Gf  153 (182)
T 1s7k_A           77 CQNEMAGVLSFNAIEPINKAAYIG-YWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRN--HF  153 (182)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEE-EEECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             ECCEEEEEEEEEEccCCCceEEEE-EEECHhhcCCCHHHHHHHHHHHHHHhhCCccEEEEEecCCCHHHHHHHHHC--CC
Confidence            689999999988766656678887 69999999999999999999999997 8999999888664   89999999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +..+...
T Consensus       154 ~~~~~~~  160 (182)
T 1s7k_A          154 TLEGCMK  160 (182)
T ss_dssp             EEEEEEE
T ss_pred             EEEeeee
Confidence            9988644

>1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A*

Probab=99.21  E-value=3.5e-11  Score=100.85  Aligned_cols=78  Identities=8%  Similarity=0.029  Sum_probs=68.8

Q ss_pred             CCCcEEEEEEeeecC---CCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~---~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G  135 (359)
                      ++|++||.+.+....   .+.  ..++|..++|+|+|||+|||+.|++++++.+++ ++.-.+...+..|..||+|+  |
T Consensus        54 ~~~~~vG~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~l~~~~~n~~a~~~y~k~--G  130 (181)
T 1m4i_A           54 HHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRG-AYQLGALSSSARARRLYASR--G  130 (181)
T ss_dssp             ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHH-HCSEEEEECCTTTHHHHHHT--T
T ss_pred             ECCEEEEEEEEEEeccccCCCCcceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHh-CcEEEEecCCHHHHHHHHhc--C
Confidence            688999999987655   443  678999999999999999999999999999999 88777777888899999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      |+..+.
T Consensus       131 F~~~~~  136 (181)
T 1m4i_A          131 WLPWHG  136 (181)
T ss_dssp             CEECCS
T ss_pred             CEEcCC
Confidence            998774

>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}

Probab=99.20  E-value=1.2e-11  Score=101.22  Aligned_cols=79  Identities=13%  Similarity=0.032  Sum_probs=70.1

Q ss_pred             CCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173           62 LGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      +|++||.+.+...+.   +...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+..   .|..||+|+  |
T Consensus        76 ~~~~vG~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k~--G  153 (172)
T 2r1i_A           76 GEPPTGLAVLSFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEAR--G  153 (172)
T ss_dssp             TTTTCEEEEEEEECCTTCSSCEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTT--T
T ss_pred             CCeeEEEEEEEeccCCCCCCceEEEEEEEECcccccCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHC--C
Confidence            889999999876543   45689999999999999999999999999999999999999888865   489999999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+.+++.
T Consensus       154 f~~~~~~  160 (172)
T 2r1i_A          154 FTNTEPN  160 (172)
T ss_dssp             CBSSCTT
T ss_pred             CEecccC
Confidence            9977653

>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}

Probab=99.20  E-value=7.8e-11  Score=96.62  Aligned_cols=79  Identities=16%  Similarity=0.126  Sum_probs=68.9

Q ss_pred             CCCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      .++|++||.+.+...+.  ....++|..++|+|  ||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+  
T Consensus        61 ~~~~~~vG~~~~~~~~~~~~~~~~~i~~~~v~~--rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~--  136 (169)
T 3g8w_A           61 FEDDELVATCTLKQMNYVGKCHKAILENNFVKN--NDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSI--  136 (169)
T ss_dssp             ESSSCEEEEEEEEECCSTTTTTEEEEEEEEEGG--GCHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTT--
T ss_pred             EECCEEEEEEEEEeccccccCceEEEEEEEEcc--CCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHc--
Confidence            37899999998876654  23679999999999  9999999999999999999999999877665   389999999  


Q ss_pred             CcEEEEee
Q 048173          135 DFASVAEV  142 (359)
Q Consensus       135 GF~~~~e~  142 (359)
                      ||+..+..
T Consensus       137 GF~~~g~~  144 (169)
T 3g8w_A          137 GFENLAFE  144 (169)
T ss_dssp             TCEEEEEE
T ss_pred             CCEEeeee
Confidence            99988863

>2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A*

Probab=99.20  E-value=7.3e-11  Score=99.25  Aligned_cols=82  Identities=16%  Similarity=0.085  Sum_probs=71.1

Q ss_pred             CCCcEEEEEEeeecC----------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccH
Q 048173           61 NLGKVVAAVIYQIVP----------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESS  126 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~----------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~  126 (359)
                      ++|++||.+.+....          .+...++|..++|+|+|||+|||+.|++++++.+++ .|+++|.+.+..   .|.
T Consensus        85 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~  164 (202)
T 2bue_A           85 LNGEPIGYAQSYVALGSGDGWWEEETDPGVRGIDQLLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAI  164 (202)
T ss_dssp             ETTEEEEEEEEEEGGGCCTTSSTTCCCTTEEEEEEEESCGGGTTSSHHHHHHHHHHHHHHTSTTCCEEEECCCTTCHHHH
T ss_pred             ECCEEEEEEEEEEecccccccccccCCCCceEEEEEEEChhhccCChHHHHHHHHHHHHHhCCCCcEEEeCcccCCHHHH
Confidence            589999999987532          234678999999999999999999999999999998 599999998766   489


Q ss_pred             HHHhhcccCcEEEEeecc
Q 048173          127 FFFLKQVQDFASVAEVDT  144 (359)
Q Consensus       127 ~Fw~K~~~GF~~~~e~~~  144 (359)
                      .||+|+  ||+..+....
T Consensus       165 ~~y~k~--GF~~~~~~~~  180 (202)
T 2bue_A          165 RCYEKA--GFERQGTVTT  180 (202)
T ss_dssp             HHHHHT--TCEEEEEEEE
T ss_pred             HHHHHc--CCEEeeeecC
Confidence            999999  9999887443

>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.20  E-value=7.7e-11  Score=99.79  Aligned_cols=79  Identities=24%  Similarity=0.296  Sum_probs=66.8

Q ss_pred             CC-CcEEEEEEeeecCCC---CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173           61 NL-GKVVAAVIYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV  133 (359)
Q Consensus        61 ~~-g~IVgvi~l~i~~~d---~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~  133 (359)
                      ++ |++||.+.+......   ...++| .++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+ 
T Consensus        59 ~~~~~ivG~~~~~~~~~~~~~~~~~e~-~l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~yek~-  136 (175)
T 1vhs_A           59 DENGNVAAWISFETFYGRPAYNKTAEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKH-  136 (175)
T ss_dssp             CTTSCEEEEEEEEESSSSGGGTTEEEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHT-
T ss_pred             cCCCcEEEEEEEeccCCCCccCCEEEE-EEEEChhhcCCCHHHHHHHHHHHHHHhCCceEEEEEEecCCHHHHHHHHHC-
Confidence            45 899999987765431   234666 799999999999999999999999999999999988765   499999999 


Q ss_pred             cCcEEEEee
Q 048173          134 QDFASVAEV  142 (359)
Q Consensus       134 ~GF~~~~e~  142 (359)
                       ||+..+..
T Consensus       137 -GF~~~g~~  144 (175)
T 1vhs_A          137 -GFAEWGLF  144 (175)
T ss_dssp             -TCEEEEEE
T ss_pred             -CCEEEeEc
Confidence             99988863

>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}

Probab=99.20  E-value=4.2e-11  Score=95.58  Aligned_cols=80  Identities=19%  Similarity=0.211  Sum_probs=62.6

Q ss_pred             CCCceEEEEcccCcc--hHHHHHHHhcCcEEecC--CCCeeEEEeCCCCCcHHHHhhcc-cccCHHHHHHHHhCCCCCCC
Q 048173          249 NGKCFRITLMNIADD--SKKVHLTKNLRGAVTSD--GITSTHVVAGKVRKTLNFFTALS-WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       249 ~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d--~~~~THLVa~~~~RT~KfL~AIa-wIVsp~WL~eS~k~g~flDE  323 (359)
                      -=++.+|.++|+.+.  ....++|+.+||.+..+  ...+||||+++.. +.|+-.+.. +||+|+||.||+++|+.+||
T Consensus        12 lF~g~~~~isg~~~~~~~~L~~~i~~~GG~~~~~~~~~~~THlI~~~~~-~~k~~~~~~~~iV~p~Wl~dci~~~~~l~~   90 (97)
T 2ebw_A           12 IFSGVAIYVNGYTDPSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLP-NAKIKELKGEKVIRPEWIVESIKAGRLLSY   90 (97)
T ss_dssp             TTTTCEEEECSSCSSCHHHHHHHHHHTTCEECSSCCSSSCCEEECSCCC-TTHHHHTSSSCCBCTHHHHHHHHHTSCCCS
T ss_pred             CCCCeEEEEeCCCcccHHHHHHHHHHcCCEEeeecCCCCCEEEEecCCC-hHHHHHhcCCCEeChHHHHHHHHcCCccCc
Confidence            345678899998543  33458899999998875  3689999999763 345444435 99999999999999999999


Q ss_pred             Ccceec
Q 048173          324 SFYMLN  329 (359)
Q Consensus       324 e~Y~L~  329 (359)
                      ++|.|.
T Consensus        91 ~~Y~l~   96 (97)
T 2ebw_A           91 IPYQLY   96 (97)
T ss_dssp             GGGBSC
T ss_pred             hHcEec
Confidence            999864

>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V}

Probab=99.20  E-value=6.8e-11  Score=100.14  Aligned_cols=78  Identities=18%  Similarity=0.212  Sum_probs=70.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccc--cChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQH--KGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~Qg--kGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      ++|++||++.+.....  ..++|..++|+|+|||  +|||+.|++++++.+++.|+++|.+.+...   |..||+|+  |
T Consensus        78 ~~g~ivG~~~~~~~~~--~~~~i~~~~V~p~~rg~~~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~--G  153 (181)
T 2q7b_A           78 ENEKVVGSIALLRIDD--KTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQ--G  153 (181)
T ss_dssp             ETTEEEEEEEEEECSS--SEEEEEEEEECGGGSSTTTCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTT--T
T ss_pred             ECCEEEEEEEEEEcCC--CEEEEEEEEEChhhcCccccHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHC--C
Confidence            6899999999776644  5699999999999999  999999999999999999999999988774   89999999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+.++..
T Consensus       154 F~~~~~~  160 (181)
T 2q7b_A          154 FKQITRD  160 (181)
T ss_dssp             CEEECTT
T ss_pred             CEEeeee
Confidence            9988864

>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A

Probab=99.20  E-value=1.2e-10  Score=97.38  Aligned_cols=81  Identities=17%  Similarity=0.118  Sum_probs=66.4

Q ss_pred             CCCCcEEEEEEeeecCCCC---ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173           60 LNLGKVVAAVIYQIVPADT---QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV  133 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~---~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~  133 (359)
                      .++|++||.+.+.......   ..+++ .++|+|+|||+|||+.|++++++.|++.|+++|.+.+..   .|..||+|+ 
T Consensus        60 ~~~~~~vG~~~~~~~~~~~~~~~~~~~-~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~-  137 (172)
T 2j8m_A           60 DAAGEVLGYASYGDWRPFEGFRGTVEH-SVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRL-  137 (172)
T ss_dssp             CTTCCEEEEEEEEESSSSGGGTTEEEE-EEEECTTCTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT-
T ss_pred             cCCCeEEEEEEEecccCCcccCceEEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCccEEEEEEcCCCHHHHHHHHHC-
Confidence            3578999999876543211   23433 589999999999999999999999999999999988764   489999999 


Q ss_pred             cCcEEEEeec
Q 048173          134 QDFASVAEVD  143 (359)
Q Consensus       134 ~GF~~~~e~~  143 (359)
                       ||+..+...
T Consensus       138 -GF~~~g~~~  146 (172)
T 2j8m_A          138 -GFEISGQMP  146 (172)
T ss_dssp             -TCEEEEEEE
T ss_pred             -CCEEEeecc
Confidence             999988643

>1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1

Probab=99.19  E-value=1.8e-11  Score=101.58  Aligned_cols=78  Identities=9%  Similarity=0.080  Sum_probs=69.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-----ccHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-----ESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-----~A~~Fw~K~~~G  135 (359)
                      ++|++||.+.+.....  ..++|..++|+|+|||+|+|+.|++++++.+++.|++.|.+.+..     .|..||+|+  |
T Consensus        53 ~~~~~vG~~~~~~~~~--~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~--G  128 (159)
T 1yx0_A           53 EGDELAGCGALKELDT--RHGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESF--G  128 (159)
T ss_dssp             CSSSEEEEEEEEEEET--TEEECCCCCCSTTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTT--S
T ss_pred             ECCEEEEEEEEEEcCC--CcEEEEEEEECHhhcCCCHHHHHHHHHHHHHHhCCCcEEEEEecccccCchHHHHHHHc--C
Confidence            6899999999776553  569999999999999999999999999999999999999988865     389999999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+..++.
T Consensus       129 f~~~~~~  135 (159)
T 1yx0_A          129 FQYCEPF  135 (159)
T ss_dssp             EEECCCC
T ss_pred             CEEcccc
Confidence            9988763

>2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V}

Probab=99.19  E-value=7.9e-11  Score=100.60  Aligned_cols=78  Identities=12%  Similarity=0.125  Sum_probs=68.1

Q ss_pred             CCCcEEEEEEeeecCC--------------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc--
Q 048173           61 NLGKVVAAVIYQIVPA--------------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE--  124 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~--------------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~--  124 (359)
                      ++|++||.+.+.....              +...++|..++|+|+|||+|||+.|++++++   +.|++.|.+.+...  
T Consensus        78 ~~~~ivG~~~~~~~~~~~~~~~~~g~w~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~---~~g~~~i~l~v~~~N~  154 (201)
T 2pc1_A           78 EDGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIE---GHKGPDFRCDTHEKNV  154 (201)
T ss_dssp             ETTEEEEEEEEEEECCGGGGGCBSSCCSSCCSCEEEEEEEEECSTTCSSHHHHHHHHHHHH---HSCCSEEEEEECTTCH
T ss_pred             ECCeEEEEEEEecCCchhhccccccccccCCCcEEEEEEEEECHHHhCCCHHHHHHHHHHH---hCCCceEEEEEecCCH
Confidence            6899999999876432              1256889999999999999999999999999   88999999998875  


Q ss_pred             -cHHHHhhcccCcEEEEeec
Q 048173          125 -SSFFFLKQVQDFASVAEVD  143 (359)
Q Consensus       125 -A~~Fw~K~~~GF~~~~e~~  143 (359)
                       |..||+|+  ||+.+++..
T Consensus       155 ~a~~~y~k~--GF~~~~~~~  172 (201)
T 2pc1_A          155 TMQHILNKL--GYQYCGKVP  172 (201)
T ss_dssp             HHHHHHHHT--TCEEEEEEC
T ss_pred             HHHHHHHHC--CCEEEEEEE
Confidence             99999999  999988753

>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*

Probab=99.18  E-value=5.1e-11  Score=97.63  Aligned_cols=75  Identities=13%  Similarity=0.115  Sum_probs=65.7

Q ss_pred             EEEEEEeeecC--CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEEE
Q 048173           65 VVAAVIYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFASV  139 (359)
Q Consensus        65 IVgvi~l~i~~--~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~  139 (359)
                      |||.+.+....  ++.+.++|..++|+|+|||+|||+.|+.++++.+++.|+++|.+.+..   .|..||+|+  ||+..
T Consensus        71 ivG~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~--Gf~~~  148 (171)
T 2b5g_A           71 IVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRR--GASDL  148 (171)
T ss_dssp             EEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTT--TCEEH
T ss_pred             eEEEEEEEeecCCcCCceEEEEEEEECHhhhCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccCHHHHHHHHHc--CCEec
Confidence            89999986543  344568899999999999999999999999999999999999988854   589999999  99977


Q ss_pred             Ee
Q 048173          140 AE  141 (359)
Q Consensus       140 ~e  141 (359)
                      +.
T Consensus       149 ~~  150 (171)
T 2b5g_A          149 SS  150 (171)
T ss_dssp             HH
T ss_pred             cc
Confidence            65

>1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1

Probab=99.18  E-value=1.1e-10  Score=96.42  Aligned_cols=80  Identities=11%  Similarity=0.075  Sum_probs=68.8

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....++...++|.. +|+|+|||+|+|+.|+.++++.+ ++.|+++|.+.+...   |..||+|+  ||
T Consensus        75 ~~~~~vG~~~~~~~~~~~~~~~i~~-~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~--Gf  151 (184)
T 1nsl_A           75 YDGSLCGMISLHNLDQVNRKAEIGY-WIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERI--GF  151 (184)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEEE-EECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHH--TC
T ss_pred             ECCEEEEEEEEEecccccCeEEEEE-EEChhhcCCCHHHHHHHHHHHHHHHhcCcEEEEEEEecCCHHHHHHHHHc--CC
Confidence            5789999999876655556687875 99999999999999999999999 568999999888763   88999999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +.++...
T Consensus       152 ~~~~~~~  158 (184)
T 1nsl_A          152 LEEGKAR  158 (184)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEee
Confidence            9988643

>3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str}

Probab=99.18  E-value=1.6e-10  Score=94.72  Aligned_cols=79  Identities=13%  Similarity=0.015  Sum_probs=68.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+.... +...++|..+ |+|+|||+|+|+.++.++++.+.+. |+++|.+.+...   |..||+|+  ||
T Consensus        65 ~~~~~iG~~~~~~~~-~~~~~~i~~~-v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~--GF  140 (168)
T 3fbu_A           65 GENILVGHIVFHKYF-GEHTYEIGWV-FNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKI--GM  140 (168)
T ss_dssp             TTTEEEEEEEEEEEE-TTTEEEEEEE-ECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHT--TC
T ss_pred             CCCCEEEEEEEEeec-CCCcEEEEEE-ECHHHhcCCHHHHHHHHHHHHHHhhCCceEEEEEeccCChHHHHHHHHC--CC
Confidence            589999999987776 3466877765 9999999999999999999999876 999999998874   88899999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +..+...
T Consensus       141 ~~~g~~~  147 (168)
T 3fbu_A          141 RREGYFK  147 (168)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEee
Confidence            9988643

>3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus}

Probab=99.17  E-value=2.5e-11  Score=97.20  Aligned_cols=80  Identities=13%  Similarity=0.067  Sum_probs=65.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||.+.+.....  +.++|..++|+|+|||+|+|+.|+.++++.+++.|+.-.....+..|..||+|+  ||+..+
T Consensus        47 ~~~~~vG~~~~~~~~~--~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~--Gf~~~~  122 (143)
T 3bln_A           47 EDNSISGFLTYDTNFF--DCTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKIFSSTNESNESMQKVFNAN--GFIRSG  122 (143)
T ss_dssp             ETTEEEEEEEEEEEET--TEEEEEEEEECTTCCSSCHHHHHHHHHHHHCSSSEEEEEEETTCHHHHHHHHHT--TCEEEE
T ss_pred             eCCeEEEEEEEEecCC--CceEEEEEEECHHHcCCChHHHHHHHHHHHHhhCCeEEEEcccCHHHHHHHHHC--CCeEee
Confidence            6799999999876544  458899999999999999999999999999999874322222233599999999  999998


Q ss_pred             eecc
Q 048173          141 EVDT  144 (359)
Q Consensus       141 e~~~  144 (359)
                      +...
T Consensus       123 ~~~~  126 (143)
T 3bln_A          123 IVEN  126 (143)
T ss_dssp             EECS
T ss_pred             EEec
Confidence            7543

>2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1

Probab=99.17  E-value=9.4e-11  Score=96.61  Aligned_cols=80  Identities=15%  Similarity=0.042  Sum_probs=68.8

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....++...++|. ++|+|+|||+|+|+.|+.++++.+++ .|+++|.+.+...   |..||+|+  ||
T Consensus        79 ~~~~~vG~~~~~~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~--GF  155 (181)
T 2fck_A           79 QTQTLVGMVAINEFYHTFNMASLG-YWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRC--GA  155 (181)
T ss_dssp             TTCCEEEEEEEEEEEGGGTEEEEE-EEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHT--TC
T ss_pred             CCCcEEEEEEEEEecccCCeEEEE-EEEChhhcCCChHHHHHHHHHHHHHHhcCceEEEEEEccCCHHHHHHHHHc--CC
Confidence            489999999987655545668884 69999999999999999999999999 5999999988663   88999999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +.++...
T Consensus       156 ~~~~~~~  162 (181)
T 2fck_A          156 NREQLAP  162 (181)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEe
Confidence            9988643

>2k5t_A Uncharacterized protein YHHK; N-acetyl transferase, COA, bound ligand, coenzyme A, structural genomics, PSI-2, protein structure initiative; HET: COA; NMR {Escherichia coli K12}

Probab=99.17  E-value=2.8e-11  Score=98.49  Aligned_cols=75  Identities=15%  Similarity=0.168  Sum_probs=60.7

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-----ccHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-----ESSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-----~A~~Fw~K~~~  134 (359)
                      .++|++||.+.+....   ..++|..++|+|+|||+|||+.|++++++.++.  +..+.+.+..     .|..||+|+  
T Consensus        43 ~~~~~ivG~~~~~~~~---~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~--~~~~~l~~~~~~~~~~a~~fY~~~--  115 (128)
T 2k5t_A           43 RFNERLLAAVRVTLSG---TEGALDSLRVREVTRRRGVGQYLLEEVLRNNPG--VSCWWMADAGVEDRGVMTAFMQAL--  115 (128)
T ss_dssp             EETTEEEEEEEEEEET---TEEEEEEEEECTTCSSSSHHHHHHHHHHHHSCS--CCEEEECCTTCSTHHHHHHHHHHH--
T ss_pred             EECCeEEEEEEEEEcC---CcEEEEEEEECHHHcCCCHHHHHHHHHHHHhhh--CCEEEEeccCccccHHHHHHHHHc--
Confidence            3688999999876543   348999999999999999999999999999864  5666663322     478999999  


Q ss_pred             CcEEEEe
Q 048173          135 DFASVAE  141 (359)
Q Consensus       135 GF~~~~e  141 (359)
                      ||+..++
T Consensus       116 GF~~~~~  122 (128)
T 2k5t_A          116 GFTTQQG  122 (128)
T ss_dssp             TCEECSS
T ss_pred             CCCcccc
Confidence            9997664

>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=99.17  E-value=1.5e-10  Score=97.02  Aligned_cols=81  Identities=16%  Similarity=0.072  Sum_probs=65.6

Q ss_pred             CCCcEEEEEEeeecCCCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      ++|++||.+.+.......  ....+..++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+  |
T Consensus        62 ~~~~ivG~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~--G  139 (175)
T 1yr0_A           62 LDGKVAGYASYGDWRAFDGYRHTREHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESL--G  139 (175)
T ss_dssp             ETTEEEEEEEEEESSSSGGGTTEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHT--T
T ss_pred             eCCcEEEEEEEecccCccccCceEEEEEEECccccCCCHHHHHHHHHHHHHHhCCccEEEEEecCCCHHHHHHHHHC--C
Confidence            578999999876543211  112234689999999999999999999999999999999887754   489999999  9


Q ss_pred             cEEEEeec
Q 048173          136 FASVAEVD  143 (359)
Q Consensus       136 F~~~~e~~  143 (359)
                      |+.++...
T Consensus       140 F~~~g~~~  147 (175)
T 1yr0_A          140 FRVVGRFS  147 (175)
T ss_dssp             CEEEEEEE
T ss_pred             CEEEEEcc
Confidence            99988643

>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}

Probab=99.17  E-value=1e-10  Score=98.35  Aligned_cols=81  Identities=16%  Similarity=0.084  Sum_probs=66.9

Q ss_pred             CCCCcEEEEEEeeecC-----------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---cc
Q 048173           60 LNLGKVVAAVIYQIVP-----------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ES  125 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~-----------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A  125 (359)
                      .++|+|||.+.+....           .+..+++|..++|+|+|  +|||+.|++++++.+++.|++.|.+.+..   .|
T Consensus        74 ~~~~~ivG~~~~~~~~~~~~~~~~w~~~~~~~~~i~~l~V~p~~--~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a  151 (188)
T 3h4q_A           74 EENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPA  151 (188)
T ss_dssp             EETTEEEEEEEEESCCCGGGGGSCCSSCCTTCEEEEEEECCSSC--TTHHHHHHHHHHHHHHHTTCCEEEEEGGGSCGGG
T ss_pred             EECCEEEEEEEEEccCcccccccccccCCCCeEEEEEEEECCcc--CcHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHH
Confidence            3689999999986643           23567889999999999  99999999999999999999999999554   59


Q ss_pred             HHHHhhcccCcEEEEeecc
Q 048173          126 SFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus       126 ~~Fw~K~~~GF~~~~e~~~  144 (359)
                      ..||+|+  ||+.+++...
T Consensus       152 ~~~y~k~--GF~~~~~~~~  168 (188)
T 3h4q_A          152 QGLFAKF--GFHKVGEQLM  168 (188)
T ss_dssp             THHHHHT--TCEEC-----
T ss_pred             HHHHHHC--CCeEeceEEe
Confidence            9999999  9999887544

>3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}

Probab=99.17  E-value=1.1e-10  Score=105.54  Aligned_cols=81  Identities=15%  Similarity=0.162  Sum_probs=70.5

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      .++|++||.+.+...+ +.+.++|..++|+|+|||+|||+.|++++++.+++.| .++++.+...   |..||+|+  ||
T Consensus       138 ~~~g~lVG~~~~~~~~-~~~~~~i~~l~V~p~~Rg~GiG~~Ll~~~~~~a~~~g-~~i~l~v~~~N~~a~~~Y~k~--GF  213 (228)
T 3ec4_A          138 RIDGRLAAMAGERMRP-APNLAEVSGVCTWPEYRGRGLAARLIRKVIAGMAARG-EVPYLHSYASNASAIRLYESL--GF  213 (228)
T ss_dssp             EETTEEEEEEEECCCS-STTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTT-CEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             EECCEEEEEEEEEEec-CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcC-CeEEEEEeCCCHHHHHHHHHC--CC
Confidence            3689999999976652 3467999999999999999999999999999999999 8998888653   88999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +.+++...
T Consensus       214 ~~~~~~~~  221 (228)
T 3ec4_A          214 RARRAMTA  221 (228)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEE
Confidence            99887543

>3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum}

Probab=99.16  E-value=6.2e-11  Score=102.87  Aligned_cols=81  Identities=12%  Similarity=0.046  Sum_probs=72.7

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+....++...++|..++|+|+|||+|+|+.++.++++.+++.|+++|.+.+...   |..||+|+  ||+
T Consensus       100 ~~~~~iG~~~l~~~~~~~~~~ei~~~~v~~~~~g~Gig~~ll~~l~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~--GF~  177 (209)
T 3pzj_A          100 DSDQALGFLGYRQMVQAHGAIEIGHVNFSPALRRTRLATEAVFLLLKTAFELGYRRCEWRCDSRNAASAAAARRF--GFQ  177 (209)
T ss_dssp             TCCCCCEEEEEEEEEGGGTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHH--TCE
T ss_pred             CCCcEEEEEEeeeecCcCCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHcCCcEEEEeecCCCHHHHHHHHHC--CCE
Confidence            5889999999866655567899999999999999999999999999999999999999988875   89999999  999


Q ss_pred             EEEeec
Q 048173          138 SVAEVD  143 (359)
Q Consensus       138 ~~~e~~  143 (359)
                      ..+...
T Consensus       178 ~~g~~~  183 (209)
T 3pzj_A          178 FEGTLR  183 (209)
T ss_dssp             EEEEEE
T ss_pred             Eeeeec
Confidence            888643

>2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A*

Probab=99.16  E-value=1.3e-10  Score=101.72  Aligned_cols=83  Identities=12%  Similarity=0.068  Sum_probs=68.0

Q ss_pred             CCCCcEEEEEEeeecC------------------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEE
Q 048173           60 LNLGKVVAAVIYQIVP------------------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCW  120 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~------------------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~  120 (359)
                      .++|+|||.+.+....                  .+..+++|..++|+|+|||+|||+.|++++++.+++. |++.|.+.
T Consensus        60 ~~~g~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~~~  139 (224)
T 2ree_A           60 ELEDKIVGAIYSQRIDNPQLLDNKTCTQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAV  139 (224)
T ss_dssp             EESSCEEEEEEEEEESCGGGGTTCCTTTGGGGCCTTCSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEE
T ss_pred             EECCEEEEEEEEeccCchhhchhhcccchhhccCCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCccEEEEe
Confidence            3689999999875432                  1345788999999999999999999999999999997 99999832


Q ss_pred             e--------------------------ccccHHHHhhcccCcEEEEeecc
Q 048173          121 D--------------------------DKESSFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus       121 a--------------------------~~~A~~Fw~K~~~GF~~~~e~~~  144 (359)
                      .                          +..|..||+|+  ||+..+....
T Consensus       140 l~~~~~~~~~~~~~~~y~~~~~~~g~~N~~a~~fY~k~--GF~~~g~~~~  187 (224)
T 2ree_A          140 TLCRNYPDYSPMPMAEYIHQKNESGLLVDPLLRFHQIH--GAKIEKLLPG  187 (224)
T ss_dssp             ECCSSGGGTTTSCHHHHTTCBCTTSCBSSHHHHHHHHT--TCEEEEEETT
T ss_pred             ccCCccccCCCCCHHHHHHHHhcCCcccCcceeeeecC--CeEEEEEccc
Confidence            1                          23489999999  9999887544

>3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp}

Probab=99.15  E-value=5.1e-11  Score=98.57  Aligned_cols=81  Identities=12%  Similarity=0.075  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcc
Q 048173           61 NLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQV  133 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~  133 (359)
                      ++|++||.+.+.....    ....++|..++|+|+|||+|+|+.|++++++.+.+ |+++|.+.+...   |..||+|+ 
T Consensus        71 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~-~~~~i~l~v~~~N~~a~~~y~k~-  148 (182)
T 3f5b_A           71 DNEIPFAYLITSEIEKSEEYPDGAVTLDLFICRLDYIGKGLSVQMIHEFILSQFS-DTKIVLINPEISNERAVHVYKKA-  148 (182)
T ss_dssp             ETTEEEEEEEEEEECSCSSCTTCEEEEEEEECSGGGCCHHHHHHHHHHHHHHHCT-TCSEEEECCBTTCHHHHHHHHHH-
T ss_pred             eCCCcEEEEEEeccccccccCCCceEEEEEEEChhhcCCchHHHHHHHHHHHhhC-CCCEEEEecCcCCHHHHHHHHHC-
Confidence            7899999998766532    34568899999999999999999999999999955 999999988774   89999999 


Q ss_pred             cCcEEEEeecc
Q 048173          134 QDFASVAEVDT  144 (359)
Q Consensus       134 ~GF~~~~e~~~  144 (359)
                       ||+.+++...
T Consensus       149 -GF~~~~~~~~  158 (182)
T 3f5b_A          149 -GFEIIGEFIA  158 (182)
T ss_dssp             -TCEEEEEEEE
T ss_pred             -CCEEEeEEec
Confidence             9999987544

>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}

Probab=99.15  E-value=1.5e-10  Score=95.20  Aligned_cols=79  Identities=18%  Similarity=0.133  Sum_probs=68.0

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEecc-CccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSS-IYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~-~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      .++|++||.+.+....++.  ++| .++|+| +|||+|+|+.|++++++.+++.|+++|.+.+...   |..||+|+  |
T Consensus        72 ~~~~~~iG~~~~~~~~~~~--~~i-~~~v~~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~--G  146 (164)
T 3eo4_A           72 NNTIRKVGSVNVSQLNTDN--PEI-GILIGEFFLWGKHIGRHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESL--G  146 (164)
T ss_dssp             TTEEEEEEEEEEECTTSSS--CEE-EEEECSTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT--T
T ss_pred             cCCCcEEEEEEEEecCCCc--EEE-EEEEcCHHHcCccHHHHHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHC--C
Confidence            3678999999976555543  777 567888 9999999999999999999999999999988874   99999999  9


Q ss_pred             cEEEEeec
Q 048173          136 FASVAEVD  143 (359)
Q Consensus       136 F~~~~e~~  143 (359)
                      |+..+...
T Consensus       147 F~~~g~~~  154 (164)
T 3eo4_A          147 FKKTKKGR  154 (164)
T ss_dssp             CEEEEECS
T ss_pred             CEEEeeec
Confidence            99988743

>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}

Probab=99.15  E-value=2.1e-10  Score=97.89  Aligned_cols=79  Identities=16%  Similarity=0.159  Sum_probs=66.0

Q ss_pred             CCCcEEEEEEeeecCCC---CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d---~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      ++|++||.+.+......   ...+++ .++|+|+|||||||+.|++++++.+++.|+++|.+.+..   .|..||+|+  
T Consensus        69 ~~g~iiG~~~~~~~~~~~~~~~~~e~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~--  145 (182)
T 2jlm_A           69 EVGQLLGFASWGSFRAFPAYKYTVEH-SVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKL--  145 (182)
T ss_dssp             TTSCEEEEEEEEESSSSGGGTTEEEE-EEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT--
T ss_pred             cCCcEEEEEEecccCCcccccceeEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCceEEEEEEeCCCHHHHHHHHHC--
Confidence            67899999887654321   124444 589999999999999999999999999999999998865   499999999  


Q ss_pred             CcEEEEee
Q 048173          135 DFASVAEV  142 (359)
Q Consensus       135 GF~~~~e~  142 (359)
                      ||+..+..
T Consensus       146 GF~~~g~~  153 (182)
T 2jlm_A          146 GFIHSGTI  153 (182)
T ss_dssp             TCEEEEEE
T ss_pred             CCcEEEEe
Confidence            99998863

>3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii}

Probab=99.14  E-value=1.7e-10  Score=106.26  Aligned_cols=79  Identities=16%  Similarity=0.119  Sum_probs=71.1

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||.+.+....   +.++|..++|+|+|||+|||+.|++++++.++ .|++.+.+.++..+..||+|+  ||+..
T Consensus        69 ~~~g~~vG~~~~~~~~---~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~-~~~~~~~l~~n~~a~~~y~k~--Gf~~~  142 (288)
T 3ddd_A           69 FLKDEPVGMGCIFFYN---KQAWIGLMGVKKAYQRRGIGTEVFRRLLEIGR-RKVDTIRLDASSQGYGLYKKF--KFVDE  142 (288)
T ss_dssp             EETTEEEEEEEEEECS---SEEEEEEEEECGGGCSSSHHHHHHHHHHHHHH-HHCSEEEEEECTTTHHHHHHT--TCEEE
T ss_pred             EECCEEEEEEEEEEEC---CEEEEEEEEECHHHcCCCHHHHHHHHHHHHHH-cCCcEEEEEeCHHHHHHHHHC--CCEEe
Confidence            3689999999865544   67999999999999999999999999999999 999999999999999999999  99998


Q ss_pred             Eeecc
Q 048173          140 AEVDT  144 (359)
Q Consensus       140 ~e~~~  144 (359)
                      ++...
T Consensus       143 ~~~~~  147 (288)
T 3ddd_A          143 YRTVR  147 (288)
T ss_dssp             EEEEE
T ss_pred             ceEEE
Confidence            86444

>1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A*

Probab=99.13  E-value=9.1e-11  Score=92.64  Aligned_cols=75  Identities=17%  Similarity=0.263  Sum_probs=64.4

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC-cEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD-FASV  139 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G-F~~~  139 (359)
                      ++|++||.+.+.....  +.++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+  .+..||+|+  | |..+
T Consensus        18 ~~~~ivG~~~~~~~~~--~~~~i~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~--~~~nfy~k~--~~~~~~   91 (102)
T 1r57_A           18 DENNALAEITYRFVDN--NEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASCS--FAKHMLEKE--DSYQDV   91 (102)
T ss_dssp             SSTTEEEEEEEEESSS--SEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCEEEESSH--HHHHHHHHC--GGGTTT
T ss_pred             CCCeEEEEEEEEeCCC--CEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHcCCCEEEcCH--HHHHHHHhC--hHHHHH
Confidence            6789999999766542  4588999999999999999999999999999999999887664  468999999  8 8755


Q ss_pred             Ee
Q 048173          140 AE  141 (359)
Q Consensus       140 ~e  141 (359)
                      ..
T Consensus        92 ~~   93 (102)
T 1r57_A           92 YL   93 (102)
T ss_dssp             BC
T ss_pred             hh
Confidence            43

>3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A*

Probab=99.12  E-value=2.8e-10  Score=95.39  Aligned_cols=80  Identities=16%  Similarity=0.109  Sum_probs=69.8

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....++...++|.. +|+|+|||+|+|+.+++++++.+.+. |+++|.+.+...   |..||+|+  ||
T Consensus        85 ~~~~~iG~~~~~~~~~~~~~~~i~~-~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~~~v~~~N~~a~~~y~k~--GF  161 (188)
T 3r9f_A           85 YKTKIAGVVSFNIIDHANKTAYIGY-WLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRC--GF  161 (188)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEEE-EECGGGTTSSHHHHHHHHHHHHHHTTTSCSEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             ECCEEEEEEEEEEecCCCCEEEEEE-EEChhhcCCCHHHHHHHHHHHHHHHhcCeEEEEEEecCCCHHHHHHHHHC--CC
Confidence            6899999999876665567798985 89999999999999999999999766 999999988874   89999999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +..+...
T Consensus       162 ~~~g~~~  168 (188)
T 3r9f_A          162 TLEGVLQ  168 (188)
T ss_dssp             EEEEEEE
T ss_pred             eEEeEee
Confidence            9888633

>2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A*

Probab=99.12  E-value=2.1e-10  Score=97.14  Aligned_cols=80  Identities=9%  Similarity=-0.093  Sum_probs=69.9

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEeccc---cHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      .++|++||.+.+.....+...++|..+.| |+|||+|+|+.|+.++++.+++. |+++|.+.+...   |..||+|+  |
T Consensus        69 ~~~g~~vG~~~~~~~~~~~~~~~i~~~~~-p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~--G  145 (194)
T 2z10_A           69 LFGKEVAGRISVIAPEPEHAKLELGTMLF-KPFWGSPANKEAKYLLLRHAFEVLRAERVQFKVDLRNERSQRALEAL--G  145 (194)
T ss_dssp             EETTEEEEEEEEEEEEGGGTEEEEEEEEC-GGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHH--T
T ss_pred             ecCCCEEEEEEecccCcccCEEEEeeEEC-HhHhCCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHc--C
Confidence            46899999999875555556799999888 99999999999999999999986 999999888764   88999999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+..+..
T Consensus       146 F~~~g~~  152 (194)
T 2z10_A          146 AVREGVL  152 (194)
T ss_dssp             CEEEEEE
T ss_pred             CcEEEec
Confidence            9998863

>2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase, hypothetical protein; 2.25A {Pseudomonas aeruginosa}

Probab=99.10  E-value=1.5e-10  Score=97.60  Aligned_cols=79  Identities=19%  Similarity=0.222  Sum_probs=66.6

Q ss_pred             CCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecc---ccHHHHhhccc
Q 048173           61 NLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      ++|++||.+.+.....  ....++| .++|+|+|||||||+.|++++++.+++. |+++|.+.+..   .|..||+|+  
T Consensus        65 ~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~Yek~--  141 (177)
T 2vi7_A           65 HQGDVIGSASLEQHPRIRRSHSGSI-GMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKF--  141 (177)
T ss_dssp             ETTEEEEEEEEEECSSGGGTTEEEC-TTCCEESSTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHT--
T ss_pred             ECCEEEEEEEEecCCccccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHC--
Confidence            6789999998876432  2345667 5899999999999999999999999987 59999988875   499999999  


Q ss_pred             CcEEEEee
Q 048173          135 DFASVAEV  142 (359)
Q Consensus       135 GF~~~~e~  142 (359)
                      ||+..+..
T Consensus       142 GF~~~g~~  149 (177)
T 2vi7_A          142 GFETEGEM  149 (177)
T ss_dssp             TCEEEEEE
T ss_pred             CCEEEeee
Confidence            99988863

>3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans}

Probab=99.09  E-value=3.2e-10  Score=96.28  Aligned_cols=82  Identities=21%  Similarity=0.193  Sum_probs=69.3

Q ss_pred             CCCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~  134 (359)
                      .++|++||.+.+.....  +.+..+|..++|+|+|||+|||+.|+.++++.+++. ++.|.+.+..   .|..||+|+  
T Consensus        87 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-~~~i~l~v~~~N~~a~~~y~k~--  163 (197)
T 3ld2_A           87 KIKDKIVGVLDYSSLYPFPSGQHIVTFGIAVAEKERRKGIGRALVQIFLNEVKSD-YQKVLIHVLSSNQEAVLFYKKL--  163 (197)
T ss_dssp             EESSCEEEEEEEEESCSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTT-CSEEEEEEETTCHHHHHHHHHT--
T ss_pred             EeCCCEEEEEEEEeccCCCCCCeEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHH-HHeEEEEeeCCCHHHHHHHHHC--
Confidence            37899999999876432  234577889999999999999999999999999999 9999888665   389999999  


Q ss_pred             CcEEEEeecc
Q 048173          135 DFASVAEVDT  144 (359)
Q Consensus       135 GF~~~~e~~~  144 (359)
                      ||+.+++...
T Consensus       164 GF~~~~~~~~  173 (197)
T 3ld2_A          164 GFDLEARLTK  173 (197)
T ss_dssp             TCEEEEEEEE
T ss_pred             CCEEeeeccc
Confidence            9999887433

>2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A*

Probab=99.08  E-value=6.5e-10  Score=102.11  Aligned_cols=78  Identities=13%  Similarity=0.095  Sum_probs=70.6

Q ss_pred             CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH--cCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS--VGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~--~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      +|+|||.+.+.....+...++|..++|+|+|||+|||+.|+.++++.+++  .|++++.+++...   |..||+|+  ||
T Consensus       245 ~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~G~g~~L~~~~~~~~~~~~~g~~~~~l~v~~~N~~a~~ly~~~--Gf  322 (339)
T 2wpx_A          245 TGALAGYTSVSKTTGNPAYALQGMTVVHREHRGHALGTLLKLANLEYVLRHEPEVRLVETANAEDNHPMIAVNAAL--GF  322 (339)
T ss_dssp             TTEEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHHCTTCCEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             CCcEEEEEEEEccCCCCceEEEeeEEECHHhcCccHHHHHHHHHHHHHHHhCCCceEEEEecccccHHHHHHHHHc--CC
Confidence            89999999987765555689999999999999999999999999999999  9999999988763   88899999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       323 ~~~~~  327 (339)
T 2wpx_A          323 EPYDR  327 (339)
T ss_dssp             EEEEE
T ss_pred             EEecc
Confidence            98775

>2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=99.07  E-value=3.6e-10  Score=97.48  Aligned_cols=80  Identities=9%  Similarity=-0.046  Sum_probs=68.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+... ++...++| .++|+|+|||+|+|+.|+.++++.+++ .|+++|.+.+...   |..||+|+  ||
T Consensus        94 ~~g~~iG~~~~~~~-~~~~~~~i-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~--GF  169 (195)
T 2fsr_A           94 ETGECIGQIGINHG-PLFPEKEL-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERI--GG  169 (195)
T ss_dssp             TTTEEEEEEEEECS-TTCSSCEE-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHT--TC
T ss_pred             CCCCEEEEEeeEec-CCCCeEEE-EEEEChhHcCCChHHHHHHHHHHHHHhhCCccEEEEEECCCCHHHHHHHHHC--CC
Confidence            58899999987665 33456788 679999999999999999999999998 7999999988774   88999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +..++...
T Consensus       170 ~~~g~~~~  177 (195)
T 2fsr_A          170 TLDPLAPR  177 (195)
T ss_dssp             EECTTSCC
T ss_pred             EEEeeecc
Confidence            98876443

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=99.05  E-value=1.8e-10  Score=116.61  Aligned_cols=81  Identities=26%  Similarity=0.332  Sum_probs=70.4

Q ss_pred             CCCCceEEEEcccCcc------hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc----cccCHHHHHHHHh
Q 048173          248 PNGKCFRITLMNIADD------SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS----WIVSPSWLKESFG  316 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e------~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa----wIVsp~WL~eS~k  316 (359)
                      +.-.+.+|+|||+.+.      .....+++.+||.++.+ ..+||||||+.. +|.|+..|..    +||+|+||.+|++
T Consensus       351 ~~L~G~~IvfSG~~p~~~~~~r~~l~~~~~~lGa~~~~~vs~~vTHLVa~~~-~t~K~~~A~~~g~IkIVs~~WL~dcl~  429 (442)
T 3ef1_A          351 KVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAAKI-RTEKVKKAVSMGNIKVVKLNWLTESLS  429 (442)
T ss_dssp             TTSTTCEEEEESSSCTTSCSTTSHHHHHHHTTTCEECSSSSSCCSEEEECSC-CCHHHHHHHHHSSSEEEEHHHHHHHHH
T ss_pred             cccCCcEEEEecccCCCCCccHHHHHHHHHHcCCEEeCCCCCCceEEEeCCC-CCHHHHHHHhcCCCEEEeHHHHHHHHH
Confidence            4456789999999764      23457899999999998 889999999964 7999999987    8999999999999


Q ss_pred             CCCCCCCCcceec
Q 048173          317 EGRFVDESFYMLN  329 (359)
Q Consensus       317 ~g~flDEe~Y~L~  329 (359)
                      .|+.+||.+|.|.
T Consensus       430 ~~krldE~~YlLy  442 (442)
T 3ef1_A          430 QWKRLPESDYLLY  442 (442)
T ss_dssp             HTSCCCGGGTBCC
T ss_pred             cCCcCChhccccC
Confidence            9999999999874

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=99.05  E-value=2.6e-10  Score=112.92  Aligned_cols=81  Identities=26%  Similarity=0.309  Sum_probs=69.9

Q ss_pred             CCCCceEEEEcccCcc------hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc----cccCHHHHHHHHh
Q 048173          248 PNGKCFRITLMNIADD------SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS----WIVSPSWLKESFG  316 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e------~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa----wIVsp~WL~eS~k  316 (359)
                      ..-++.+|+|||+.+.      ....++++.+||.++.+ ..+||||||+. .+|.|+..|..    +||+|+||.+|++
T Consensus       281 ~~L~G~~ivfSG~~~~~~~~~~~~l~~l~~~lGa~v~~~vs~~vTHLVa~~-~~t~K~~~A~~~~~I~IV~~~Wl~~c~~  359 (372)
T 3ef0_A          281 KVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAAK-IRTEKVKKAVSMGNIKVVKLNWLTESLS  359 (372)
T ss_dssp             TTSTTCEEEEESSSCTTSCTTTSHHHHHHHHTTCEEESSSSSCCSEEEECS-CCCHHHHHHHHSSSCCEEEHHHHHHHHH
T ss_pred             hhcCCcEEEEecccCCCcchhHHHHHHHHHHcCCEEeCcCCCCceEEEEcC-CCchHHHHHHhcCCCEEEcHHHHHHHHH
Confidence            5667889999999753      23457899999999998 77999999986 56899988875    8999999999999


Q ss_pred             CCCCCCCCcceec
Q 048173          317 EGRFVDESFYMLN  329 (359)
Q Consensus       317 ~g~flDEe~Y~L~  329 (359)
                      +++.+||++|.|.
T Consensus       360 ~~~~vdE~~Y~l~  372 (372)
T 3ef0_A          360 QWKRLPESDYLLY  372 (372)
T ss_dssp             TTSCCCGGGGBCC
T ss_pred             hCCcCChhhceeC
Confidence            9999999999873

>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*

Probab=99.04  E-value=3.3e-10  Score=94.17  Aligned_cols=85  Identities=16%  Similarity=0.140  Sum_probs=63.5

Q ss_pred             CCCCceEEEEcccCc---c---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCC-CcHHHHhhcc-cccCHHHHHHHHhCC
Q 048173          248 PNGKCFRITLMNIAD---D---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVR-KTLNFFTALS-WIVSPSWLKESFGEG  318 (359)
Q Consensus       248 ~~~~~prI~fSgl~~---e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~-RT~KfL~AIa-wIVsp~WL~eS~k~g  318 (359)
                      +.-+..+|.|.....   +   +....+++.+||.++.+ ...+||||+.... +|.+...... .||+|+||.+|.++|
T Consensus         6 p~f~g~vvyvd~~~~~g~~~~s~~l~~~l~~~GA~v~~~l~~~vTHvV~~~~~~~~~~~A~~~~i~iV~~~Wv~~C~~~~   85 (107)
T 3pa6_A            6 PILKDVVAYVEVWSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLWVEKCRTAG   85 (107)
T ss_dssp             CTTTTCEEEEEEBCTTSCCBCHHHHHHHHHHTTCEECSSCCTTCCEEEEESCCHHHHHHHHHHTCEEECHHHHHHHHHHT
T ss_pred             cccCCEEEEEeccCCCChhhHHHHHHHHHHHcCCEEecccCCCccEEEEeCCCChHHHHHhcCCCEEECHHHHHHHHHhC
Confidence            445666777744431   1   23357789999999998 8899999997644 3443322223 999999999999999


Q ss_pred             CCCCCCcceecCcc
Q 048173          319 RFVDESFYMLNDDG  332 (359)
Q Consensus       319 ~flDEe~Y~L~D~e  332 (359)
                      +.+||++|.+.+++
T Consensus        86 ~~vdE~~Y~i~~~~   99 (107)
T 3pa6_A           86 AHIDESLFPAANMN   99 (107)
T ss_dssp             SCCCGGGSBCCCTT
T ss_pred             ccCChhcccCCCCc
Confidence            99999999998774

>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*

Probab=99.04  E-value=2.9e-10  Score=109.01  Aligned_cols=88  Identities=19%  Similarity=0.165  Sum_probs=71.9

Q ss_pred             ccCCCCCceEEEEcccCcchH--HHHHHHhcCcEEecC-C-CCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhC
Q 048173          245 EFQPNGKCFRITLMNIADDSK--KVHLTKNLRGAVTSD-G-ITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGE  317 (359)
Q Consensus       245 ~~~~~~~~prI~fSgl~~e~k--k~klik~LGG~V~~d-~-~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~  317 (359)
                      ...+.-.+..|+|||+.+..+  ..++|+.+||.++.+ . .+|||||++.. .+.|+-.|..   +||+|+||.+|++.
T Consensus       195 ~~~~~f~g~~i~~tG~~~~~r~~l~~li~~~GG~~~~~ls~~~~THLI~~~~-~g~K~~~A~~~gi~IV~~~Wl~dsi~~  273 (298)
T 3olc_X          195 FKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEP-KGQKYECAKRWNVHCVTTQWFFDSIEK  273 (298)
T ss_dssp             GBCCTTTTCEEEECSCCHHHHHHHHHHHHHTTCEECSSCCTTTCCEEECSSS-CSHHHHHHHHTTCEEECHHHHHHHHHH
T ss_pred             ccccccCCeEEEEeCCCCccHHHHHHHHHHcCCEEeceecCCCceEEEEeCC-CchHHHHHHHCCCeEEeHHHHHHHHHC
Confidence            334566778999999987532  247889999999988 4 68999999987 4788888875   99999999999999


Q ss_pred             CCCCCCCcceecCccc
Q 048173          318 GRFVDESFYMLNDDGY  333 (359)
Q Consensus       318 g~flDEe~Y~L~D~e~  333 (359)
                      |+.+||++|.|...+.
T Consensus       274 g~~lde~~Y~l~~~~~  289 (298)
T 3olc_X          274 GFCQDESIYKTEPRPE  289 (298)
T ss_dssp             TSCCCGGGSBSCC---
T ss_pred             CCCCCchhcCCCCCch
Confidence            9999999999987654

>4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti}

Probab=99.03  E-value=6.2e-10  Score=100.17  Aligned_cols=82  Identities=12%  Similarity=0.117  Sum_probs=67.8

Q ss_pred             CCCcEEEEEEeeecCC----------------------------------CCceeeeeEEEeccCccccChHHHHHHHHH
Q 048173           61 NLGKVVAAVIYQIVPA----------------------------------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLR  106 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~----------------------------------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~  106 (359)
                      ++|+|||++.+.....                                  .+.+.+|..++|+|+|||+|||+.|+++++
T Consensus        94 ~~g~IVG~a~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~L~~~~~  173 (238)
T 4fd7_A           94 GSDEIVGVNILDVASRSDKDNAQFNSAIFQAIYDTIEYVSHQANIFDRYNVDHYLNAMGLSVDPKYRGRGIATEILRARI  173 (238)
T ss_dssp             TCCSEEEEEEEEEEETTCCCCCCCSCHHHHHHHHHHHHHHHHHTHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHTHH
T ss_pred             CCCcEEEEEEecccCcccccccccCCHHHHHHHHHHHHHHhhCcHHHhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHH
Confidence            4689999988776543                                  124556777999999999999999999999


Q ss_pred             HHHHHcCCcEEEEEe-ccccHHHHhhcccCcEEEEeecc
Q 048173          107 KRLQSVGIRTIFCWD-DKESSFFFLKQVQDFASVAEVDT  144 (359)
Q Consensus       107 ~~lk~~GI~~I~l~a-~~~A~~Fw~K~~~GF~~~~e~~~  144 (359)
                      +.+++.|++.+.+.. +..|..||+|+  ||+.+++..-
T Consensus       174 ~~~~~~g~~~~~~~~~n~~a~~~y~k~--GF~~~~~~~~  210 (238)
T 4fd7_A          174 PLCRAVGLKLSATCFTGPNSQTAATRV--GFQEDFTITY  210 (238)
T ss_dssp             HHHHHHTCCEEEEEECSHHHHHHHHHH--TCEEEEEEEH
T ss_pred             HHHHHcCCcEEEEEcCCHHHHHHHHHC--CCEEEEEEEe
Confidence            999999999776533 34599999999  9999987655

>3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis}

Probab=99.03  E-value=5.2e-10  Score=102.39  Aligned_cols=76  Identities=13%  Similarity=0.110  Sum_probs=63.8

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||.+.+...   ...++|..++|+|+|||+|||+.|+.++++.++..++.- ++..+..|..||+|+  ||+.+
T Consensus       170 ~~~g~~vG~~~~~~~---~~~~~i~~l~V~p~~Rg~GiG~~Ll~~~~~~a~~~~i~l-v~~~n~~a~~~Y~k~--GF~~~  243 (254)
T 3frm_A          170 YVNHQPVGIVDIIMT---DKTIEIDGFGVLEEFQHQGIGSEIQAYVGRMANERPVIL-VADGKDTAKDMYLRQ--GYVYQ  243 (254)
T ss_dssp             EETTEEEEEEEEEEC---SSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTCCEEE-EECSSCTTHHHHHHT--TCEEE
T ss_pred             EECCEEEEEEEEEEc---CCEEEEEEEEECHHHcCCCHHHHHHHHHHHHhccCcEEE-EECCchHHHHHHHHC--CCEEe
Confidence            478999999997754   345899999999999999999999999999996655544 333466799999999  99998


Q ss_pred             Ee
Q 048173          140 AE  141 (359)
Q Consensus       140 ~e  141 (359)
                      ++
T Consensus       244 g~  245 (254)
T 3frm_A          244 GF  245 (254)
T ss_dssp             EE
T ss_pred             ee
Confidence            86

>3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron}

Probab=99.03  E-value=4.6e-10  Score=95.02  Aligned_cols=72  Identities=15%  Similarity=0.184  Sum_probs=60.5

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-------ccHHHHhhc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-------ESSFFFLKQ  132 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-------~A~~Fw~K~  132 (359)
                      .++|++||.+.+...   .+.++|..++|+|+|||+|||+.|++++++.++    ..+++.+..       .|..||+|+
T Consensus        56 ~~~~~ivG~~~~~~~---~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~----~~~~l~v~~~~~~~n~~a~~fY~k~  128 (181)
T 3ey5_A           56 FDDDLPIGFITYWDF---DEFYYVEHFATNPALRNGGYGKRTLEHLCEFLK----RPIVLEVERPVEEMAKRRINFYQRH  128 (181)
T ss_dssp             EETTEEEEEEEEEEC---SSCEEEEEEEECGGGTTSSHHHHHHHHHHHHCC----SCEEEEECCTTSHHHHHHHHHHHHT
T ss_pred             EECCEEEEEEEEEEc---CCeEEEEEEEEchhhcCCCHHHHHHHHHHHhhh----hCeEEEEeCCCccchHHHHHHHHHC
Confidence            378999999987654   356899999999999999999999999999998    455555444       268999999


Q ss_pred             ccCcEEEE
Q 048173          133 VQDFASVA  140 (359)
Q Consensus       133 ~~GF~~~~  140 (359)
                        ||+..+
T Consensus       129 --GF~~~~  134 (181)
T 3ey5_A          129 --GFTLWE  134 (181)
T ss_dssp             --TCEEEE
T ss_pred             --CCEECC
Confidence              999988

>2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A*

Probab=99.01  E-value=9.6e-10  Score=95.22  Aligned_cols=79  Identities=10%  Similarity=-0.036  Sum_probs=68.0

Q ss_pred             CCCcEEEEEEeeecCC-CCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      ++|++||.+.+..... +...++|. ++|+|+|||+|+|+.+++++++.+.+ .|+++|.+.+...   |..||+|+  |
T Consensus        86 ~~~~~iG~~~~~~~~~~~~~~~eig-~~v~~~~rgkGig~~ll~~l~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~--G  162 (218)
T 2vzy_A           86 VDGRAVGVQALSSKDFPITRQVDSG-SWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRN--G  162 (218)
T ss_dssp             ETTEEEEEEEEEEESHHHHCEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHT--T
T ss_pred             ECCEEEEEEEEeccccCCCCeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCceEEEEEeccCCHHHHHHHHHC--C
Confidence            6889999999876653 23567786 58999999999999999999999998 7999999888764   89999999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+..+..
T Consensus       163 F~~~g~~  169 (218)
T 2vzy_A          163 YRDNGLD  169 (218)
T ss_dssp             CEEEEEE
T ss_pred             CEEeeee
Confidence            9988863

>1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A*

Probab=99.00  E-value=1.4e-09  Score=99.64  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=69.5

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC----------cEEEEEecc---ccHH
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI----------RTIFCWDDK---ESSF  127 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI----------~~I~l~a~~---~A~~  127 (359)
                      ++|++||.+.+...+.+...++|..++|+|+|||+|+|+.|+.++++.+++.|+          +.|.+++..   .|..
T Consensus       216 ~~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~Glg~~ll~~~~~~~~~~g~~~~~~~~~~~~~i~l~v~~~N~~a~~  295 (318)
T 1p0h_A          216 RPGRLLGFHWTKVHPDHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVR  295 (318)
T ss_dssp             --CCEEEEEEEECCTTSTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHHH
T ss_pred             CCCcEEEEEEeeccCCCCceEEEEEEEECHHhccCCHHHHHHHHHHHHHHHcccccccccccccceEEEEecCCCHHHHH
Confidence            688999999987766655689999999999999999999999999999999999          999888766   3899


Q ss_pred             HHhhcccCcEEEEeec
Q 048173          128 FFLKQVQDFASVAEVD  143 (359)
Q Consensus       128 Fw~K~~~GF~~~~e~~  143 (359)
                      ||+|+  ||+..+...
T Consensus       296 ~y~~~--GF~~~~~~~  309 (318)
T 1p0h_A          296 TYQSL--GFTTYSVDT  309 (318)
T ss_dssp             HHHHT--TCEEEEEEE
T ss_pred             HHHhc--CCEEEeEEE
Confidence            99999  999887643

>2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A*

Probab=98.99  E-value=1.1e-09  Score=100.57  Aligned_cols=79  Identities=18%  Similarity=0.128  Sum_probs=70.4

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc----------ccHHHH
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK----------ESSFFF  129 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~----------~A~~Fw  129 (359)
                      .++|++||.+.+... .+...++|..++|+|+|||+|||+.|+.++++.+++.|++.|.+.+..          .+..||
T Consensus        65 ~~~g~~vG~~~~~~~-~~~~~~~i~~~~v~p~~r~~Gig~~Ll~~~~~~~~~~g~~~i~~~~~~~n~~g~~~~~~~~~~~  143 (339)
T 2wpx_A           65 RSGGRVVGALRLALP-DGAPTARVDQLLVHPGRRRRGIGRALWAHARELARKHDRTTLTATVVESLPSGPAQDPGPAAFA  143 (339)
T ss_dssp             EETTEEEEEEEEEEE-TTCSEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEEEEECCSSSCCCCCHHHHHH
T ss_pred             EECCEEEEEEEEEec-CCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEeecCCCCcccccchHHHHH
Confidence            378999999998776 444679999999999999999999999999999999999999888765          589999


Q ss_pred             hhcccCcEEEEe
Q 048173          130 LKQVQDFASVAE  141 (359)
Q Consensus       130 ~K~~~GF~~~~e  141 (359)
                      +|+  ||+..+.
T Consensus       144 ~~~--Gf~~~~~  153 (339)
T 2wpx_A          144 AAM--GAHRSDI  153 (339)
T ss_dssp             HHT--TCEECSS
T ss_pred             HHC--CCeeeee
Confidence            999  9998764

>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*

Probab=98.99  E-value=1.3e-09  Score=108.55  Aligned_cols=79  Identities=19%  Similarity=0.335  Sum_probs=70.7

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .++|++||++.+...+. ...++|..++|+|+|||+|+|+.|++++++.+++.|++.+++. +..|..||+|+  ||+..
T Consensus       352 ~~~g~iVG~~~~~~~~~-~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~-N~~a~~fY~k~--GF~~~  427 (456)
T 3d2m_A          352 EHDGNLYGCAALKTFAE-ADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFAL-STNTGEWFAER--GFQTA  427 (456)
T ss_dssp             EETTEEEEEEEEEECSS-TTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEE-ESSCHHHHHTT--TCEEE
T ss_pred             EECCEEEEEEEEEecCC-CCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEE-cHHHHHHHHHC--CCEEe
Confidence            37899999999876643 4679999999999999999999999999999999999999887 66799999999  99988


Q ss_pred             Eee
Q 048173          140 AEV  142 (359)
Q Consensus       140 ~e~  142 (359)
                      +..
T Consensus       428 ~~~  430 (456)
T 3d2m_A          428 SED  430 (456)
T ss_dssp             CGG
T ss_pred             Ccc
Confidence            753

>2g0b_A FEEM; N-acyl transferase, environmental DNA, protein-product compl antibiotic synthase, transferase; HET: NLT; 3.00A {Uncultured bacterium}

Probab=98.98  E-value=1.8e-09  Score=97.46  Aligned_cols=81  Identities=12%  Similarity=0.036  Sum_probs=73.5

Q ss_pred             CCCcEEEEEEeeecCC-------------------CCceeeeeEEEeccCc--------cccChHHHHHHHHHHHHHHcC
Q 048173           61 NLGKVVAAVIYQIVPA-------------------DTQYAEVPLAAVSSIY--------QHKGVGRLLYLKLRKRLQSVG  113 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-------------------d~~~a~I~~~AV~~~~--------QgkGIG~~Lv~~l~~~lk~~G  113 (359)
                      .+|++||.+.+++..+                   ....++|..+||+++|        ||+|||+.|++.+++.++..|
T Consensus        56 ~~g~ivG~~~l~~~~~~~lp~~~~~~~e~~~~~~~~~~~~EI~RLaV~~~~~~~~~~~~rg~gig~~L~~~a~~~a~~~g  135 (198)
T 2g0b_A           56 NGEVLYGTISIINDGAQGLPMDSIYAVELAAWRGEGKKLAEVVQFAMDHTLYEAVAGAKPSPFEAASLFTMVLTYALETH  135 (198)
T ss_dssp             ETTEEEEEEEEEECBTTBCTTHHHHHHHHHHHHHTTCCEEEEEEEEECTTSSCCCC----CGGGCHHHHHHHHHHHHHTT
T ss_pred             ECCEEEEEEEEEeCCCcCCchhhhchhhhhhhhhcCCcEEEEEEEEEchHHhhcccccccCChHHHHHHHHHHHHHHHcC
Confidence            6799999999988765                   3358999999999999        999999999999999999999


Q ss_pred             CcEEEEEeccccHHHHhhcccCcEEEEeec
Q 048173          114 IRTIFCWDDKESSFFFLKQVQDFASVAEVD  143 (359)
Q Consensus       114 I~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~  143 (359)
                      ++.+++.++..+..||+|+  ||+.+++..
T Consensus       136 ~~~i~levn~ra~~FY~k~--GF~~~g~~~  163 (198)
T 2g0b_A          136 IDYLCISINPKHDTFYSLL--GFTQIGALK  163 (198)
T ss_dssp             CSEEEEEECGGGHHHHHHT--TCEEEEEEE
T ss_pred             CCEEEEEeCHHHHHHHHHC--CCEEeeCCc
Confidence            9999999999999999999  999999743

>3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}

Probab=98.97  E-value=2.1e-09  Score=97.51  Aligned_cols=79  Identities=11%  Similarity=-0.012  Sum_probs=71.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.+....++...++|..++|+|+|||+|+|+.++..+++.+.+ +|+++|.+.+...   |..||+|+  ||
T Consensus       107 ~~g~~IG~~~l~~~~~~~~~~eig~~~v~p~~rgkGig~~ll~~ll~~a~~~~g~~~i~l~v~~~N~~s~~lyek~--GF  184 (246)
T 3tcv_A          107 ASGKVAGRQALMRIDPANGVIEIGSIYWGPLISRRPAATEAQFLFMQYVFDVLGYRRYEWECHNENGPSRRAAERF--GF  184 (246)
T ss_dssp             TTCSEEEEEEEEEEETTTTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHH--TC
T ss_pred             CCCCEEEEEEEeecccccCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCcEEEEEEccCCCHHHHHHHHHC--CC
Confidence            588999999987666656789999999999999999999999999999987 6999999888874   99999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       185 ~~~G~  189 (246)
T 3tcv_A          185 RFEGI  189 (246)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            98886

>3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea}

Probab=98.97  E-value=2e-09  Score=100.94  Aligned_cols=79  Identities=19%  Similarity=0.276  Sum_probs=65.5

Q ss_pred             CCCCcEEEEEEeee-cCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQI-VPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i-~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      .++|++||++.+.. ..++...+++. ++|+|+|||+|||+.|++++++.+++.|++.+. .+..   .|..||+|+  |
T Consensus       186 ~~~g~iVG~~~~~~~~~~~~~~~~~~-l~V~p~~RGkGiG~~Ll~~l~~~a~~~g~~~i~-~v~~~N~~A~~~Yekl--G  261 (276)
T 3iwg_A          186 WHKGKLLAAGECRLFDQYQTEYADLG-MIVAQSNRGQGIAKKVLTFLTKHAATQGLTSIC-STESNNVAAQKAIAHA--G  261 (276)
T ss_dssp             EETTEEEEEEEEEECSSSCTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTTCEEEE-EEETTCHHHHHHHHHT--T
T ss_pred             EECCEEEEEEEEEeccccCCcceEEE-EEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEE-EEccCCHHHHHHHHHC--C
Confidence            36899999998664 33444555444 999999999999999999999999999999998 5544   489999999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+..+..
T Consensus       262 F~~~~~l  268 (276)
T 3iwg_A          262 FTSAHRI  268 (276)
T ss_dssp             EEEEEEE
T ss_pred             CEEeeEE
Confidence            9988764

>2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans}

Probab=98.97  E-value=2.2e-09  Score=91.15  Aligned_cols=82  Identities=18%  Similarity=0.099  Sum_probs=67.5

Q ss_pred             CCCcEEEEEEeeecCC-------CCceeeee-EEEec-cCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHH
Q 048173           61 NLGKVVAAVIYQIVPA-------DTQYAEVP-LAAVS-SIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSF  127 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~-------d~~~a~I~-~~AV~-~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~  127 (359)
                      ++|++||.+.+.....       +...++|. .++|+ |+|||+|+|+.+++++++.+.+ .|+++|.+.+...   |..
T Consensus        77 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~  156 (198)
T 2qml_A           77 INGVPMSYWESYWVKEDIIANYYPFEEHDQGIHLLIGPQEYLGQGLIYPLLLAIMQQKFQEPDTNTIVAEPDRRNKKMIH  156 (198)
T ss_dssp             ETTEEEEEEEEEEGGGSGGGGGSCCCTTCEEEEEEECSGGGSSSSTHHHHHHHHHHHHHTSTTCCEEEECCBTTCHHHHH
T ss_pred             ECCEEEEEEEEEecccccccccccCCCccEEEEEEEeCHHHcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHH
Confidence            6889999999875442       23345565 37888 5999999999999999999987 5999999998875   899


Q ss_pred             HHhhcccCcEEEEeecc
Q 048173          128 FFLKQVQDFASVAEVDT  144 (359)
Q Consensus       128 Fw~K~~~GF~~~~e~~~  144 (359)
                      ||+|+  ||+..++...
T Consensus       157 ~y~k~--GF~~~~~~~~  171 (198)
T 2qml_A          157 VFKKC--GFQPVKEVEL  171 (198)
T ss_dssp             HHHHT--TCEEEEEEEC
T ss_pred             HHHHC--CCEEEEEEec
Confidence            99999  9999887443

>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*

Probab=98.95  E-value=2e-09  Score=100.69  Aligned_cols=80  Identities=18%  Similarity=0.126  Sum_probs=69.2

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      +.++|++||.+.+...+.+...++| .++|+|+|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+  |
T Consensus       212 a~~~~~~vG~~~~~~~~~~~~~~e~-~~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~--G  288 (333)
T 4ava_A          212 VTDGSDPVADARFVRDETDPTVAEI-AFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRY--G  288 (333)
T ss_dssp             EEETTEEEEEEEEEECSSCTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTT--T
T ss_pred             EEeCCCeEEEEEEEecCCCCCeEEE-EEEECHHhcCCCHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHc--C
Confidence            3477889999998877765567766 488999999999999999999999999999999888876   389999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      |+...+
T Consensus       289 F~~~~~  294 (333)
T 4ava_A          289 AVWQRE  294 (333)
T ss_dssp             CCCEEC
T ss_pred             Cceecc
Confidence            997643

>3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728}

Probab=98.95  E-value=1.8e-09  Score=100.46  Aligned_cols=79  Identities=16%  Similarity=0.082  Sum_probs=69.0

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+...+  .+.++|..++|+|+|||+|+|+.|++++++.+++.|+++| +.+..   .|..||+|+  ||+
T Consensus        67 ~~g~iVG~~~~~~~~--~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i-l~v~~~N~~a~~~Yek~--GF~  141 (266)
T 3c26_A           67 VSGRPVATIHMEKLP--DGSVMLGGLRVHPEYRGSRLGMSIMQETIQFLRGKTERLR-SAVYSWNEPSLRLVHRL--GFH  141 (266)
T ss_dssp             ETTEEEEEEEEEECT--TSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHBTTBSEEE-EEEETTCHHHHHHHHHH--TCE
T ss_pred             ECCEEEEEEEEEEcC--CCeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEE-EEEcCCCHHHHHHHHHC--CCE
Confidence            689999999987664  3569999999999999999999999999999999999999 66543   589999999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      ..++...
T Consensus       142 ~~~~~~~  148 (266)
T 3c26_A          142 QVEEYPI  148 (266)
T ss_dssp             EEEEEEE
T ss_pred             EeeEEEe
Confidence            8886433

>2pr1_A Uncharacterized N-acetyltransferase YLBP; YIBP protein, coenzyme A, structural GE PSI-2, protein structure initiative; HET: SUC COA; 3.20A {Bacillus subtilis}

Probab=98.94  E-value=1.9e-09  Score=91.01  Aligned_cols=75  Identities=25%  Similarity=0.222  Sum_probs=61.7

Q ss_pred             CCCCcEEEEEEeeecCCC--------CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhh
Q 048173           60 LNLGKVVAAVIYQIVPAD--------TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLK  131 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d--------~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K  131 (359)
                      ..+++++|.+.+......        ...++|..++|+|+|||+|||+.|++++++    .|+ .+.+.+...|..||+|
T Consensus        54 ~~~~~~~g~~~~~~~~~~i~G~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~----~g~-~l~~~~~n~a~~fY~k  128 (163)
T 2pr1_A           54 YFGDKLVARMSLYQVNGKSNPYFDNRQDYLELWKLEVLPGYQNRGYGRALVEFAKS----FKM-PIRTNPRMKSAEFWNK  128 (163)
T ss_dssp             EETTEEEEEEEEEEECTTSSCCSGGGCCEEEEEEEEECTTSTTSSHHHHHHHHHHT----TCS-CEEECCCGGGHHHHHH
T ss_pred             EeCCceeEEEEEEecCCeeeeEEecCCCEEEEEEEEECHHHcCCCHHHHHHHHHHH----cCc-EEEEecCchHHHHHHH
Confidence            367889998887654321        357899999999999999999999999998    365 5777776679999999


Q ss_pred             cccCcEEEEe
Q 048173          132 QVQDFASVAE  141 (359)
Q Consensus       132 ~~~GF~~~~e  141 (359)
                      +  ||+..+.
T Consensus       129 ~--GF~~~~~  136 (163)
T 2pr1_A          129 M--NFKTVKY  136 (163)
T ss_dssp             T--TCEECCC
T ss_pred             c--CCEEeee
Confidence            9  9998775

>3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus}

Probab=98.93  E-value=2e-09  Score=97.76  Aligned_cols=80  Identities=8%  Similarity=-0.002  Sum_probs=68.8

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec----cccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD----KESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~----~~A~~Fw~K~~~G  135 (359)
                      .++|++||.+.+... .+...++|..++|+|+|||+|+|+.|+.++++.+++.|++.+.+.+.    ..|..||+|+  |
T Consensus       227 ~~~g~~vG~~~~~~~-~~~~~~~i~~~~v~p~~rg~G~g~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~~a~~~y~~~--G  303 (330)
T 3tt2_A          227 VETDSGHIVGTCLGQ-ETAGKGWIGSVGVRRPWRGRGIALALLQEVFGVYYRRGVREVELSVDAESRTGAPRLYRRA--G  303 (330)
T ss_dssp             EETTTTEEEEEEEEE-EETTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEEEETTTCSCHHHHHT--T
T ss_pred             EECCEEEEEEEEecC-CCCCcEEEEEeeECHHHhhcCHHHHHHHHHHHHHHHcCCCeEEEEEecCCChhHHHHHHHc--C
Confidence            368999999987663 22356899999999999999999999999999999999999988643    3589999999  9


Q ss_pred             cEEEEee
Q 048173          136 FASVAEV  142 (359)
Q Consensus       136 F~~~~e~  142 (359)
                      |+..++.
T Consensus       304 F~~~~~~  310 (330)
T 3tt2_A          304 MHVKHRY  310 (330)
T ss_dssp             CEEEEEE
T ss_pred             CEEeEEE
Confidence            9998863

>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A

Probab=98.92  E-value=3.1e-09  Score=88.17  Aligned_cols=82  Identities=13%  Similarity=0.172  Sum_probs=66.6

Q ss_pred             CCCCceEEEEcccCcchHH---HHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc-----cccCHHHHHHHHhCC
Q 048173          248 PNGKCFRITLMNIADDSKK---VHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS-----WIVSPSWLKESFGEG  318 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e~kk---~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa-----wIVsp~WL~eS~k~g  318 (359)
                      .-=.+.++.|++..|...+   .++|..+||.+.+. .+++||+|+.+. -+.+|-.+..     -+|+|+||.+|.+++
T Consensus         6 d~F~g~~f~l~~~~p~~~r~~l~ryiia~GG~v~~~~~~~vTHvIt~~~-~d~~~~~a~~~~p~~~~V~P~WI~~Ci~~~   84 (104)
T 3pc6_A            6 DFFEGKHFFLYGEFPGDERRRLIRYVTAFNGELEDYMNERVQFVITAQE-WDPNFEEALMENPSLAFVRPRWIYSCNEKQ   84 (104)
T ss_dssp             CTTTTCEEEEESCCSTTHHHHHHHHHHHTTCEECSSCCTTCCEEEESSC-CCHHHHHHHTTCTTCEEECHHHHHHHHHHT
T ss_pred             hhhCCeEEEEcCCCcHHHHHHHHHHHHHcCCEEEcccCCCceEEEeCCC-CChhHHHHhhhCCCCeEEccHHHHHHHhcC
Confidence            3345678999999853332   47788999998876 789999999986 6667766664     899999999999999


Q ss_pred             CCCCCCcceecC
Q 048173          319 RFVDESFYMLND  330 (359)
Q Consensus       319 ~flDEe~Y~L~D  330 (359)
                      +.|++++|++.-
T Consensus        85 klvp~~~y~~~~   96 (104)
T 3pc6_A           85 KLLPHQLYGVVP   96 (104)
T ss_dssp             SCCCGGGGBCCC
T ss_pred             ccCCcccceecc
Confidence            999999998753

>2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10

Probab=98.87  E-value=5.2e-09  Score=100.12  Aligned_cols=81  Identities=10%  Similarity=0.103  Sum_probs=69.4

Q ss_pred             CCCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~  134 (359)
                      .++|++||.+.+.....     ....++|..++|+|+|||+|+|+.|++++++.+++.|+..+.+  +..+..||+|+  
T Consensus        54 ~~~g~~vG~~~~~~~~~~~~g~~~~~~~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~i~l--n~~a~~~Y~~~--  129 (396)
T 2ozg_A           54 YREQKVAGGLAILPMGQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIPISVL--YPATQRLYRKA--  129 (396)
T ss_dssp             EETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEE--CCSCHHHHHHT--
T ss_pred             EECCEEEEEEEEEeccceECCeecceeEEEEEEEChhhccCCHHHHHHHHHHHHHHHCCCeEEEE--ccccHHHHHhc--
Confidence            36899999998766421     2256889999999999999999999999999999999999998  56789999999  


Q ss_pred             CcEEEEeecc
Q 048173          135 DFASVAEVDT  144 (359)
Q Consensus       135 GF~~~~e~~~  144 (359)
                      ||+..++...
T Consensus       130 GF~~~~~~~~  139 (396)
T 2ozg_A          130 GYEQAGSSCV  139 (396)
T ss_dssp             TCEEEEEEEE
T ss_pred             CCeEcccEEE
Confidence            9998886443

>2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10

Probab=98.86  E-value=5.1e-09  Score=101.08  Aligned_cols=80  Identities=5%  Similarity=0.118  Sum_probs=67.6

Q ss_pred             cCCCCcEEEEEEeeecCC---C--CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIVPA---D--TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~---d--~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~  133 (359)
                      +.++|+|||++.+.....   +  ...++|..++|+|+|||+|||+.|++++++.+++.|+..+.+++.  +.+||+|+ 
T Consensus        65 a~~~g~lVG~~~~~~~~~~~~g~~~~~~~i~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~~--~~~fY~r~-  141 (406)
T 2i00_A           65 WFHENQLISQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY--NIPYYRRK-  141 (406)
T ss_dssp             EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHHT-
T ss_pred             EEECCEEEEEEEEEEEEEEECCEEEEeccEEEEEEChhhCCCCHHHHHHHHHHHHHHhCCCeEEEEEcc--Chhhhhcc-
Confidence            347899999998753221   1  146899999999999999999999999999999999998888765  59999999 


Q ss_pred             cCcEEEEee
Q 048173          134 QDFASVAEV  142 (359)
Q Consensus       134 ~GF~~~~e~  142 (359)
                       ||+..+..
T Consensus       142 -GF~~~~~~  149 (406)
T 2i00_A          142 -GWEIMSDK  149 (406)
T ss_dssp             -TCEEEEEE
T ss_pred             -CceEccce
Confidence             99988763

>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A

Probab=98.86  E-value=3.5e-09  Score=92.38  Aligned_cols=74  Identities=14%  Similarity=-0.038  Sum_probs=65.5

Q ss_pred             CCCCcEEEEEEeee--cCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQI--VPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i--~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~  134 (359)
                      .++|+|||.+.++.  .. |..++.|.+++    |||+|||+.|++++++.|++.|+.+|.+.++.+   |..||+++  
T Consensus        41 e~~g~ivG~v~l~~~i~g-dg~~~~L~dl~----~R~~GIG~~Ll~~a~~~a~~~G~~rv~L~~~~~N~~a~~fye~~--  113 (141)
T 2d4p_A           41 EEGEEPMGFALAQAVWQG-EATTVLVTRIE----GRSVEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAE--  113 (141)
T ss_dssp             EETTEEEEEEEEEEEECS-SSEEEEEEEEE----ESSHHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHT--
T ss_pred             EECCEEEEEEeeeeEEEc-CCeEEEEeHHh----hccccHHHHHHHHHHHHHHHCCCCEEEEEecccCHHHHHHHHHC--
Confidence            37899999665542  33 88999999999    999999999999999999999999999998885   99999999  


Q ss_pred             CcEEEE
Q 048173          135 DFASVA  140 (359)
Q Consensus       135 GF~~~~  140 (359)
                      ||....
T Consensus       114 Gf~~~~  119 (141)
T 2d4p_A          114 GFALGP  119 (141)
T ss_dssp             TCCCCS
T ss_pred             CCEecC
Confidence            999655

>2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli}

Probab=98.84  E-value=2.2e-09  Score=86.20  Aligned_cols=70  Identities=14%  Similarity=0.125  Sum_probs=56.6

Q ss_pred             CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEe-ccccHHHHhhcccCcEEEE
Q 048173           62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWD-DKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a-~~~A~~Fw~K~~~GF~~~~  140 (359)
                      +|++||.+.+.       .++|..++|+|+|||+|+|+.|++++++.++.   -.+.+.. +..|..||+|+  ||+..+
T Consensus        59 ~~~~vG~~~~~-------~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~---~~~~v~~~N~~a~~~y~k~--Gf~~~~  126 (147)
T 2kcw_A           59 RDQPVGFMLLS-------GQHMDALFIDPDVRGCGVGRVLVEHALSMAPE---LTTNVNEQNEQAVGFYKKV--GFKVTG  126 (147)
T ss_dssp             TSCEEEEEEEE-------TTEEEEEEECHHHHTTTHHHHHHHHHHHHCTT---CEEEEETTCHHHHHHHHHH--TEEEEE
T ss_pred             CCCEEEEEEEe-------cceeccEEECHHHhCCCHHHHHHHHHHHhccc---eEEEEecCChHHHHHHHHC--CCEEec
Confidence            39999999865       16799999999999999999999999999853   2333333 23589999999  999988


Q ss_pred             eec
Q 048173          141 EVD  143 (359)
Q Consensus       141 e~~  143 (359)
                      +..
T Consensus       127 ~~~  129 (147)
T 2kcw_A          127 RSE  129 (147)
T ss_dssp             ECS
T ss_pred             eee
Confidence            743

>3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase (GNAT) family, structural joint center for structural genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis}

Probab=98.82  E-value=5.5e-09  Score=97.63  Aligned_cols=77  Identities=13%  Similarity=0.017  Sum_probs=65.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++|++||++.+.....  ..++| .++|+|+|||||+|+.|++++++.+++.|+..++...+..|..||+|+  ||+..+
T Consensus       167 ~~g~iVG~~~~~~~~~--~~~ei-~i~v~p~~rGkGlg~~Ll~~li~~a~~~g~~~~~~~~N~~a~~lYeKl--GF~~~g  241 (249)
T 3g3s_A          167 HKGQVVSGASSYASYS--AGIEI-EVDTREDYRGLGLAKACAAQLILACLDRGLYPSWDAHTLTSLKLAEKL--GYELDK  241 (249)
T ss_dssp             ETTEEEEEEEEEEEET--TEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCEEECEESSHHHHHHHHHH--TCCEEE
T ss_pred             ECCEEEEEEEEEEecC--CeEEE-EEEEChHhcCCCHHHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHC--CCEEee
Confidence            6799999998776643  44666 589999999999999999999999999999865555566799999999  999888


Q ss_pred             ee
Q 048173          141 EV  142 (359)
Q Consensus       141 e~  142 (359)
                      +.
T Consensus       242 ~~  243 (249)
T 3g3s_A          242 AY  243 (249)
T ss_dssp             EE
T ss_pred             eE
Confidence            64

>3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis}

Probab=98.82  E-value=1e-08  Score=98.93  Aligned_cols=80  Identities=13%  Similarity=0.102  Sum_probs=67.0

Q ss_pred             cCCCCcEEEEEEeeec---CCCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIV---PADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~---~~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~  133 (359)
                      +.++|+|||++.+...   ..+.  ..++|..++|+|+|||+|||+.|++++++.+++.|+..+.+..  .+.+||+|+ 
T Consensus        50 ~~~~g~lvG~~~~~~~~~~~~~~~~~~~~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~l~~--~a~~~Y~~~-  126 (388)
T 3n7z_A           50 IMEGENLAAKLHLIPFHIYIGKEKFKMGGVAGVATYPEYRRSGYVKELLQHSLQTMKKDGYTVSMLHP--FAVSFYRKY-  126 (388)
T ss_dssp             EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHHTCCEEEECC--SCHHHHHTT-
T ss_pred             EEECCEEEEEEEEEeEEEEECCEEEEeeEEEEEEECHHHCCCChHHHHHHHHHHHHHHCCCcEEEEcc--CChhhhhhc-
Confidence            3478999999884432   2222  4679999999999999999999999999999999999888873  679999999 


Q ss_pred             cCcEEEEee
Q 048173          134 QDFASVAEV  142 (359)
Q Consensus       134 ~GF~~~~e~  142 (359)
                       ||+..++.
T Consensus       127 -Gf~~~~~~  134 (388)
T 3n7z_A          127 -GWELCANL  134 (388)
T ss_dssp             -TCEEEEEE
T ss_pred             -CcEEeccE
Confidence             99988764

>2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10

Probab=98.79  E-value=1.1e-08  Score=98.49  Aligned_cols=80  Identities=14%  Similarity=0.090  Sum_probs=66.9

Q ss_pred             cCCCCcEEEEEEeeecC---CC--CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIVP---AD--TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~---~d--~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~  133 (359)
                      +.++|++||++.+....   .+  ...++|..++|+|+|||+|||+.|++++++.+++.|+..+.+++.  +.+||+|+ 
T Consensus        52 a~~~g~~vg~~~~~~~~~~~~g~~~~~~~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~L~~~--~~~~Y~~~-  128 (400)
T 2hv2_A           52 FLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVALSYLAPF--SYPFYRQY-  128 (400)
T ss_dssp             EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHTT-
T ss_pred             EEECCEEEEEEEEeeeEEEECCEEEEeccEeEEEEChhhcCCCHHHHHHHHHHHHHHHcCceEEEEecC--CHhHHHhc-
Confidence            34789999998865322   11  145899999999999999999999999999999999998888765  49999999 


Q ss_pred             cCcEEEEee
Q 048173          134 QDFASVAEV  142 (359)
Q Consensus       134 ~GF~~~~e~  142 (359)
                       ||+.....
T Consensus       129 -GF~~~~~~  136 (400)
T 2hv2_A          129 -GYEQTFEQ  136 (400)
T ss_dssp             -TCEECCEE
T ss_pred             -CCEEeceE
Confidence             99987653

>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*

Probab=98.78  E-value=5.9e-09  Score=99.87  Aligned_cols=77  Identities=21%  Similarity=0.366  Sum_probs=66.5

Q ss_pred             CCCceEEEEcccCcchH--HHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCC
Q 048173          249 NGKCFRITLMNIADDSK--KVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVD  322 (359)
Q Consensus       249 ~~~~prI~fSgl~~e~k--k~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flD  322 (359)
                      .-.+..|++||+.++.+  ..++++.+||.++.+ ..++||||++.. +|.|+..|+.   |||+|+||.+|.+.++.++
T Consensus       105 ~l~g~~~~~tG~~~~~r~~l~~~i~~~GG~v~~~~t~~tTHLI~~~~-~t~Ky~~A~~~gi~IV~~~Wl~~c~~~~~~~~  183 (298)
T 3olc_X          105 VMSDVTISCTSLEKEKREEVHKYVQMMGGRVYRDLNVSVTHLIAGEV-GSKKYLVAANLKKPILLPSWIKTLWEKSQEKK  183 (298)
T ss_dssp             TTTTCEEEEESCCHHHHHHHHHHHHHTTCEECSSCCTTCCEEEESSS-CSHHHHHHHHTTCCEECHHHHHHHHHHHHTTC
T ss_pred             ccCCeEEEeCCCcHHhHHHHHHHHHHCCCEEecCcCCCeeEEEEeCC-CChHHHHHHHCCCeEeeHHHHHHHHHcCCcCC
Confidence            45678999999988533  247889999999998 789999999975 7999999988   9999999999999999988


Q ss_pred             CCcc
Q 048173          323 ESFY  326 (359)
Q Consensus       323 Ee~Y  326 (359)
                      ..+|
T Consensus       184 ~~~~  187 (298)
T 3olc_X          184 ITRY  187 (298)
T ss_dssp             CSSG
T ss_pred             cccc
Confidence            7665

>2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum}

Probab=98.75  E-value=9.8e-09  Score=93.31  Aligned_cols=80  Identities=8%  Similarity=-0.047  Sum_probs=62.5

Q ss_pred             CCCCcEEEEEEeeecCCCC--------ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEE-------------
Q 048173           60 LNLGKVVAAVIYQIVPADT--------QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIF-------------  118 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~--------~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~-------------  118 (359)
                      .++|+|||.+.++....-.        ..++|..++|+|+|||+|||++|++++++.++..|+-.+.             
T Consensus        67 ~~dg~iVG~~~l~~~~~~~~~~~~~~~~~~el~~i~V~p~~RG~GIG~~Ll~~~~~~a~~~~~i~l~~~~~~~~~~~~~~  146 (211)
T 2q04_A           67 RQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHWDLKGSG  146 (211)
T ss_dssp             EETTEEEEEEEEECCCTTSGGGCSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHTSGGGGGSEEEEEECGGGCCHHHHC
T ss_pred             EECCEEEEEEEEEeCCcccccccccccceEEEeEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceeeeehhhhcCccccc
Confidence            4789999988876553211        3578888999999999999999999999998887653332             


Q ss_pred             EEe---ccccHHHHhhcccCcEEEEe
Q 048173          119 CWD---DKESSFFFLKQVQDFASVAE  141 (359)
Q Consensus       119 l~a---~~~A~~Fw~K~~~GF~~~~e  141 (359)
                      +.+   +..|..||+|+  ||+..+.
T Consensus       147 L~V~~~N~~A~~lY~k~--GF~~~g~  170 (211)
T 2q04_A          147 LSVWDYRKIMEKMMNHG--GLVFFPT  170 (211)
T ss_dssp             CCHHHHHHHHHHHHHHT--TCEEECC
T ss_pred             cchhhhhHHHHHHHHHC--CCEEecc
Confidence            222   23589999999  9999886

>3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} PDB: 3sxo_A 3ryo_A 3uy5_A

Probab=98.75  E-value=1.1e-08  Score=101.50  Aligned_cols=78  Identities=14%  Similarity=0.227  Sum_probs=65.1

Q ss_pred             CCcEEEEEEeeecC---CC---CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC
Q 048173           62 LGKVVAAVIYQIVP---AD---TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD  135 (359)
Q Consensus        62 ~g~IVgvi~l~i~~---~d---~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G  135 (359)
                      +|+|||.+.++...   .+   ...++|..++|+|+|||+|||+.|++++++.+++.|+..+++++.  +.+||+|+  |
T Consensus        81 ~g~lVG~~~~~~~~~~~~gg~~~~~~~I~~v~V~P~~Rg~Gig~~Ll~~~l~~a~~~g~~~~~L~~~--a~~fY~r~--G  156 (428)
T 3r1k_A           81 GSEVVGMALYMDLRLTVPGEVVLPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHAS--EGGIYGRF--G  156 (428)
T ss_dssp             -CCEEEEEEEEEEEEEETTTEEEEEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEECS--STTSSGGG--T
T ss_pred             CCcEEEEEEEEeeeeccCCCcccceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecC--CHHHHHhC--C
Confidence            39999988865432   12   145889999999999999999999999999999999998888754  68999999  9


Q ss_pred             cEEEEeec
Q 048173          136 FASVAEVD  143 (359)
Q Consensus       136 F~~~~e~~  143 (359)
                      |+..+...
T Consensus       157 F~~~~~~~  164 (428)
T 3r1k_A          157 YGPATTLH  164 (428)
T ss_dssp             CEECCEEE
T ss_pred             CEEeeeEE
Confidence            99877533

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=98.71  E-value=3.2e-08  Score=89.74  Aligned_cols=74  Identities=7%  Similarity=-0.075  Sum_probs=63.7

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|++ |.+.++....   .++|. ++|+|+|||+|+|+.+++++++.+ ++.|+++|.+.+..   .|..||+|+  ||
T Consensus        77 ~~g~~-G~~~~~~~~~---~~~ig-~~v~~~~~g~G~g~~l~~~l~~~a~~~~g~~~i~~~v~~~N~~s~~ly~k~--GF  149 (301)
T 2zw5_A           77 DGTVP-GMAGLLGGTD---VPGLT-WLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARV--GL  149 (301)
T ss_dssp             TTBCC-EEEEEESSCS---SCEEE-EEECTTSTTTTHHHHHHHHHHHHHHTTTCCSEEEEEEESSCHHHHHHHHHT--TC
T ss_pred             CCCCe-EEEEEecCCC---eEEEE-EEECHhHcCCCHHHHHHHHHHHHHHhcCCccEEEEEeCCCCHHHHHHHHHc--CC
Confidence            47889 9988765443   57787 689999999999999999999999 56799999998855   489999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       150 ~~~g~  154 (301)
T 2zw5_A          150 TERAR  154 (301)
T ss_dssp             EEEEE
T ss_pred             cCcce
Confidence            99886

>3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis}

Probab=98.71  E-value=2.2e-08  Score=98.93  Aligned_cols=81  Identities=15%  Similarity=0.205  Sum_probs=67.7

Q ss_pred             CCC--CcEEEEEEeeecC---CCC---ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhh
Q 048173           60 LNL--GKVVAAVIYQIVP---ADT---QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLK  131 (359)
Q Consensus        60 ~~~--g~IVgvi~l~i~~---~d~---~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K  131 (359)
                      .++  |+|||++.++...   .++   ..++|..++|+|+|||+|||+.|++++++.+++.|+..+++++.  +.+||+|
T Consensus        71 ~~~~~g~lvG~~~~~~~~~~~~g~~~~~~~~I~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~~--~~~fY~r  148 (422)
T 3sxn_A           71 PDETDDAFVGQSLYLDMQLTVPGGEVLPVAGISFVAVAPTHRRRGVLRAMYTELHDRIARAGYPLAVLTAS--EGGIYGR  148 (422)
T ss_dssp             ECTTSSSEEEEEEEEEEEEECTTSCEEEEEEEEEEEECTTTTTSSHHHHHHHHHHHHHHHHTCSEEEECCS--STTSSGG
T ss_pred             EECCCCcEEEEEEEEEeEeecCCCcccccceEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEecC--CHHHHHh
Confidence            366  9999998875432   222   45899999999999999999999999999999999998888754  5899999


Q ss_pred             cccCcEEEEeecc
Q 048173          132 QVQDFASVAEVDT  144 (359)
Q Consensus       132 ~~~GF~~~~e~~~  144 (359)
                      .  ||+..++...
T Consensus       149 ~--GF~~~~~~~~  159 (422)
T 3sxn_A          149 F--GYGVATIEQH  159 (422)
T ss_dssp             G--TCEECCEEEE
T ss_pred             C--CCEEeceeEE
Confidence            9  9998876443

>1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signalin; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3

Probab=98.69  E-value=2.7e-08  Score=89.23  Aligned_cols=90  Identities=10%  Similarity=-0.013  Sum_probs=74.7

Q ss_pred             CCCcEEEEEEeeecC-------------------CCCceeeeeEEEeccCccc----cChHHHHHHHHHHHHHHcCCcEE
Q 048173           61 NLGKVVAAVIYQIVP-------------------ADTQYAEVPLAAVSSIYQH----KGVGRLLYLKLRKRLQSVGIRTI  117 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~-------------------~d~~~a~I~~~AV~~~~Qg----kGIG~~Lv~~l~~~lk~~GI~~I  117 (359)
                      ++|++||++++....                   .+....+|.-|||++++|+    .|+|..|+.++.+.+++.|++.+
T Consensus        61 ~~g~~vGt~Rll~~~~~~~l~~~f~~~~~~~~~p~~~~~~ei~R~aV~~~~r~~~~~~~v~~~L~~~~~~~a~~~g~~~~  140 (201)
T 1ro5_A           61 EDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTL  140 (201)
T ss_dssp             ETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEE
T ss_pred             eCCeEEEEEecCCCCCCchhhhhhhhhcCCCCCCCCCCEEEeeeeEECchhhccccchHHHHHHHHHHHHHHHHCCCCEE
Confidence            348999999987532                   1356789999999999998    79999999999999999999999


Q ss_pred             EEEeccccHHHHhhcccCcEE--EEeecccCcccCcc
Q 048173          118 FCWDDKESSFFFLKQVQDFAS--VAEVDTEGRAGRLP  152 (359)
Q Consensus       118 ~l~a~~~A~~Fw~K~~~GF~~--~~e~~~~g~~~~~~  152 (359)
                      ++.+...+..||++.  ||..  +++.-..+.+.|..
T Consensus       141 ~~~a~~~~~~fy~r~--G~~~~~~G~~~~~~g~~~~~  175 (201)
T 1ro5_A          141 VTVTTVGVEKMMIRA--GLDVSRFGPHLKIGIERAVA  175 (201)
T ss_dssp             EEEEEHHHHHHHHHT--TCEEEESSCCEEETTEEEEE
T ss_pred             EEEECHHHHHHHHHc--CCCeEECCCCeeeCCeEEEE
Confidence            999999999999999  9985  55543444455544

>1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1

Probab=98.68  E-value=4.5e-08  Score=86.72  Aligned_cols=81  Identities=16%  Similarity=0.085  Sum_probs=62.8

Q ss_pred             CCCcEEEEEEeeecCCC-------Cceeeee-EEEec-cCccccChHHHHHHHHHHHHHH--cCCcEEEEEeccc---cH
Q 048173           61 NLGKVVAAVIYQIVPAD-------TQYAEVP-LAAVS-SIYQHKGVGRLLYLKLRKRLQS--VGIRTIFCWDDKE---SS  126 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d-------~~~a~I~-~~AV~-~~~QgkGIG~~Lv~~l~~~lk~--~GI~~I~l~a~~~---A~  126 (359)
                      .+|++||.+.++....+       ....++. .+.|. |+|||||+|+.+++++++.+.+  .|+++|.+.+...   |.
T Consensus        98 ~~g~~iG~~~l~~~~~~~~~~~~~~~~~~~g~~~~i~~p~~rGkGiG~~ll~~~~~~a~~~~~g~~~I~l~v~~~N~~A~  177 (210)
T 1yk3_A           98 WHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATR  177 (210)
T ss_dssp             ETTEEEEEEEEEEGGGBGGGGSSCCCTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHH
T ss_pred             ECCEEEEEEEEEcccccccccccCCCCCceEEEEEEEChhhcCCChHHHHHHHHHHHHHhcCCCCCEEEEecCccCHHHH
Confidence            57899999887643211       0112222 45554 8999999999999999999996  8999999988763   99


Q ss_pred             HHHhhcccCcEEEEeec
Q 048173          127 FFFLKQVQDFASVAEVD  143 (359)
Q Consensus       127 ~Fw~K~~~GF~~~~e~~  143 (359)
                      .||+|+  ||+..+...
T Consensus       178 ~lyek~--GF~~~g~~~  192 (210)
T 1yk3_A          178 RLCEWA--GCKFLGEHD  192 (210)
T ss_dssp             HHHHHH--TCEEEEEEE
T ss_pred             HHHHHc--CCEEeEEEe
Confidence            999999  999988743

>1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5

Probab=98.66  E-value=6.1e-08  Score=92.32  Aligned_cols=72  Identities=14%  Similarity=0.292  Sum_probs=61.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQ-SVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk-~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      ++|++||.+...  +    .++|..++|+|+|||+|+|+.|+.++.+.+. +.|+. +++.+..   .|..||+|+  ||
T Consensus       218 ~~g~~VG~~~~~--~----~~~i~~l~V~p~~rgkGiG~~ll~~l~~~~~~~~g~~-i~l~V~~~N~~A~~lyekl--GF  288 (312)
T 1sqh_A          218 DTGELIAWIFQN--D----FSGLGMLQVLPKAERRGLGGLLAAAMSREIARGEEIT-LTAWIVATNWRSEALLKRI--GY  288 (312)
T ss_dssp             TTCCEEEEEEEC--T----TSSEEEEEECGGGCSSSHHHHHHHHHHHHHHHHSCSC-EEEEEETTCHHHHHHHHHH--TC
T ss_pred             cCCCEEEEEEEc--C----CceEEEEEECHHHcCCCHHHHHHHHHHHHHHHhCCCe-EEEEEeCCCHHHHHHHHHC--CC
Confidence            688999988642  2    2569999999999999999999999999998 99998 7766654   399999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       289 ~~~g~  293 (312)
T 1sqh_A          289 QKDLV  293 (312)
T ss_dssp             EEEEE
T ss_pred             EEeee
Confidence            98764

>3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus}

Probab=98.65  E-value=6.8e-08  Score=87.60  Aligned_cols=77  Identities=12%  Similarity=0.016  Sum_probs=61.1

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-------CCcEEEEEecc---ccHHHH
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-------GIRTIFCWDDK---ESSFFF  129 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-------GI~~I~l~a~~---~A~~Fw  129 (359)
                      .++|+|||.+.+.....  . ..+-.++|+|+|||+|||+.|++++++.+++.       +...+.+++..   .+..||
T Consensus        66 ~~~g~~vG~~~~~~~~~--~-~~~~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~y  142 (330)
T 3tt2_A           66 APDGEAAAYADVLNRRY--V-QLSVYGYVHPRFRGMGLGTWLVQWGEEWIQDRMHLAPAEAQVTVQHYIRASSTSALRLM  142 (330)
T ss_dssp             CTTSSEEEEEEEEEETT--T-EEEEEEEECTTSTTSSHHHHHHHHHHHHHHHHGGGSCTTBCEEEEEEEETTCHHHHHHH
T ss_pred             CCCCcEEEEEEEEecCC--e-EEEEEEEECccccCccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeccccCChHHHHHH
Confidence            47899999999744332  2 44667999999999999999999999999988       55555445543   389999


Q ss_pred             hhcccCcEEEEe
Q 048173          130 LKQVQDFASVAE  141 (359)
Q Consensus       130 ~K~~~GF~~~~e  141 (359)
                      +++  ||.....
T Consensus       143 ~~~--Gf~~~~~  152 (330)
T 3tt2_A          143 EQH--GYRPVRD  152 (330)
T ss_dssp             HHT--TCEEEEE
T ss_pred             HhC--CCceEEE
Confidence            999  9998764

>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens}

Probab=98.62  E-value=2e-08  Score=82.99  Aligned_cols=63  Identities=22%  Similarity=0.367  Sum_probs=51.5

Q ss_pred             HHHHHhcCcEEecC-CCCeeEEEeCC---CCCcHHHHhh--cc---cccCHHHHHHHHhCCCCCCCCcceec
Q 048173          267 VHLTKNLRGAVTSD-GITSTHVVAGK---VRKTLNFFTA--LS---WIVSPSWLKESFGEGRFVDESFYMLN  329 (359)
Q Consensus       267 ~klik~LGG~V~~d-~~~~THLVa~~---~~RT~KfL~A--Ia---wIVsp~WL~eS~k~g~flDEe~Y~L~  329 (359)
                      .+.++..||.++++ .+.+||||+.+   ..+.++.|.+  +.   .||+++|+.||.++|+.|||+.|.+.
T Consensus        33 ~~~a~~~Ga~v~~~~~~~vTHVVvd~~~s~~~~l~~l~~~~l~~~~~iV~~~Wv~dci~~~~llde~~y~~~  104 (106)
T 2jw5_A           33 EKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQERRLVDVAGFSIF  104 (106)
T ss_dssp             HHHHHHTTCCCCSTTCTTCCEEEECSSSCHHHHHHHTTCSSCCSSCEEEEHHHHHHHHHTCSCCCGGGTBCS
T ss_pred             HHHHHHcCCEEeeccCCCccEEEEcCCCCHHHHHHHHhhcccCCCcEEecCchHHHHHhcCcccCccccccc
Confidence            46788999999988 67999999974   2345555554  33   89999999999999999999999653

>2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12}

Probab=98.55  E-value=5.4e-08  Score=102.94  Aligned_cols=79  Identities=18%  Similarity=0.088  Sum_probs=61.7

Q ss_pred             CCCCcEEEEEEeeecCC-----------------------------------CCceeeeeEEEeccCccccChHHHHHHH
Q 048173           60 LNLGKVVAAVIYQIVPA-----------------------------------DTQYAEVPLAAVSSIYQHKGVGRLLYLK  104 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~-----------------------------------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~  104 (359)
                      .++|+|||++.+...+.                                   ....++|..+||+|+|||+|||+.|+++
T Consensus       400 ~~~g~IVG~i~v~~eG~l~~~~~~~~~~g~rRp~G~lip~~l~~~~~~~e~~~~~~~~I~~IAV~P~~rg~GiG~~LL~~  479 (671)
T 2zpa_A          400 AGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGNNPLAATLRGRRVSRIAVHPARQREGTGRQLIAG  479 (671)
T ss_dssp             ECSSSEEEEEEEEEEECCCHHHHHHHHHTSCCCSSCHHHHHHHHHSSCTTGGGSEEEEEEEEEECTTSCSSSHHHHHHHH
T ss_pred             EECCeEEEEEEEEEcCCcCHHHHHHHHhcccCCCCcchhHHHHHhhcchhhcccCceEEEEEEECHHHcCCCHHHHHHHH
Confidence            36899999999865432                                   1245679999999999999999999999


Q ss_pred             HHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173          105 LRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus       105 l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      +++.++..+.-.+....+..+..||+|+  ||+.+.
T Consensus       480 ~e~~a~~~~~l~v~~~~n~~ai~FYek~--GF~~v~  513 (671)
T 2zpa_A          480 ALQYTQDLDYLSVSFGYTGELWRFWQRC--GFVLVR  513 (671)
T ss_dssp             HHHTCCSCSEEEEEEECCHHHHHHHHHT--TCEEEE
T ss_pred             HHHHHhcCCEEEEEecCCHHHHHHHHHC--CCEEEe
Confidence            9998855444333333456799999999  999875

>1xmt_A Putative acetyltransferase; structural genomics, protein structure initiative, CESG, AT1G77540, center for eukaryotic structural genomics; 1.15A {Arabidopsis thaliana} SCOP: d.108.1.1 PDB: 2q44_A 2evn_A 2il4_A* 2q4y_A*

Probab=98.51  E-value=1.1e-07  Score=77.25  Aligned_cols=65  Identities=17%  Similarity=0.113  Sum_probs=52.9

Q ss_pred             EEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHH-HHhhc
Q 048173           65 VVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSF-FFLKQ  132 (359)
Q Consensus        65 IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~-Fw~K~  132 (359)
                      .+|.+.+..... +..++|.+++|+|+|||+|||+.|++++++.+++.|++.+.+.+.  +.+ ||+|+
T Consensus        22 ~vG~i~~~~~~~-~~~~~i~~i~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~--~~~~f~~k~   87 (103)
T 1xmt_A           22 HEAFIEYKMRNN-GKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPSCSY--VSDTFLPRN   87 (103)
T ss_dssp             SSSEEEEEEETT-TTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTCEEEECSHH--HHHTHHHHC
T ss_pred             cEEEEEEEEcCC-CCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCeEEEEehh--hhHHHHHhC
Confidence            357666554432 246889999999999999999999999999999999997765544  466 99999

>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.45  E-value=1.8e-07  Score=76.84  Aligned_cols=73  Identities=15%  Similarity=0.269  Sum_probs=54.6

Q ss_pred             CceEEEEcccCcchHHHHHHHhcCcEEecC------------CCCeeEEEeCCCCCcHHHHhhcc--cccCHHHHHHHHh
Q 048173          251 KCFRITLMNIADDSKKVHLTKNLRGAVTSD------------GITSTHVVAGKVRKTLNFFTALS--WIVSPSWLKESFG  316 (359)
Q Consensus       251 ~~prI~fSgl~~e~kk~klik~LGG~V~~d------------~~~~THLVa~~~~RT~KfL~AIa--wIVsp~WL~eS~k  316 (359)
                      ++.++.++.-.+......+|+.+||.|..+            ....||+|++++.-  +-  ...  .+|.|+||.||..
T Consensus        14 ~g~~F~i~~e~p~~~le~~I~~~GG~v~~~~~~~~g~~~~~~~~~iTh~I~drp~~--~~--~~~~r~~VqPqWV~Dcin   89 (100)
T 2ep8_A           14 EGLKFFLNREVPREALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQ--QT--SVIGRCYVQPQWVFDSVN   89 (100)
T ss_dssp             SSCEEECCSSSCHHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECSCTTT--SC--CBTTBEEECTHHHHHHHH
T ss_pred             CCcEEEEecCCCHHHHHHHHHHcCCEEEeccccccCcccccCCCceEEEEecccch--hh--hcCCCeEEcchHHHHHHh
Confidence            345565654444444567899999999875            47899999997531  11  123  8999999999999


Q ss_pred             CCCCCCCCcce
Q 048173          317 EGRFVDESFYM  327 (359)
Q Consensus       317 ~g~flDEe~Y~  327 (359)
                      +++.+|+++|.
T Consensus        90 ~~~lLp~~~Y~  100 (100)
T 2ep8_A           90 ARLLLPVAEYF  100 (100)
T ss_dssp             HTSCCCTTTCC
T ss_pred             cCCcCChhhcC
Confidence            99999999994

>2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase, structural genomics, montreal-K bacterial structural genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia coli} PDB: 2fs5_A*

Probab=98.41  E-value=9.3e-07  Score=78.87  Aligned_cols=71  Identities=11%  Similarity=0.044  Sum_probs=60.8

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA  137 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~  137 (359)
                      ++|++||.+.+.....     .+..++|.+   |+|||+.|+.++++.+++.|+++|.+.+..   .|..||+|+  ||+
T Consensus       156 ~~g~ivG~~~l~~~~~-----~~~~i~v~~---g~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~lY~k~--GF~  225 (235)
T 2ft0_A          156 ASGDIRGYVSLRELNA-----TDARIGLLA---GRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQS--GAN  225 (235)
T ss_dssp             TTSCEEEEEEEEECSS-----SEEEEEEEE---CTTCHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT--TCE
T ss_pred             CCCcEEEEEEEEecCC-----CceEEEEEc---CCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHC--CCE
Confidence            6889999999775322     146778888   999999999999999999999999988865   389999999  999


Q ss_pred             EEEe
Q 048173          138 SVAE  141 (359)
Q Consensus       138 ~~~e  141 (359)
                      .+++
T Consensus       226 ~~~~  229 (235)
T 2ft0_A          226 VEST  229 (235)
T ss_dssp             EEEE
T ss_pred             EeEE
Confidence            8876

>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*

Probab=98.40  E-value=2.6e-07  Score=86.80  Aligned_cols=62  Identities=19%  Similarity=0.339  Sum_probs=48.8

Q ss_pred             HHHHHhcCcEEecC-CCCeeEEEeCCC-CCc--HHHHhh-cc---cccCHHHHHHHHhCCCCCCCCccee
Q 048173          267 VHLTKNLRGAVTSD-GITSTHVVAGKV-RKT--LNFFTA-LS---WIVSPSWLKESFGEGRFVDESFYML  328 (359)
Q Consensus       267 ~klik~LGG~V~~d-~~~~THLVa~~~-~RT--~KfL~A-Ia---wIVsp~WL~eS~k~g~flDEe~Y~L  328 (359)
                      ..+++..||.++++ ...+||||++.. .|.  ++-+.. +.   .||+|+||.+|+++|+.+||++|.+
T Consensus       194 ~~~i~~~GG~v~~~l~~~vTHVVv~~~~~r~~~~~~~~~~~~~~~~iV~~~Wv~dci~~~~~l~E~~Y~i  263 (263)
T 3ii6_X          194 ALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKESWVTDSIDKCELQEENQYLI  263 (263)
T ss_dssp             HHHHHHTTCEEESSCCTTCCEEEECSCCTTHHHHHHHHHTCSSCCEEEETHHHHHHHHTTSCCCGGGTBC
T ss_pred             HHHHHccCCEEecCCCCCceEEEECCCCccHHHHHHHHhhcCCCCEEeChHHHHHHHHcCCcCCHhhCCC
Confidence            46688999999998 667999999863 232  332222 22   8999999999999999999999975

>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*

Probab=98.37  E-value=7.3e-07  Score=83.70  Aligned_cols=76  Identities=17%  Similarity=0.290  Sum_probs=57.6

Q ss_pred             CceEEEE-cccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc----cccCHHHHHHHHhCCCCCC
Q 048173          251 KCFRITL-MNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS----WIVSPSWLKESFGEGRFVD  322 (359)
Q Consensus       251 ~~prI~f-Sgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa----wIVsp~WL~eS~k~g~flD  322 (359)
                      .+..|++ +|....  ....++|+++||.+..+ .+.+||+|+++  +|.|+-.++.    .||+|+||.||.++|+.||
T Consensus        12 ~G~~f~V~sg~~~~~k~~L~~lI~~~GG~v~~n~~~~t~~iIa~~--~~~k~~~~~~~g~~~IV~p~Wv~Dci~~~~llp   89 (263)
T 3ii6_X           12 EDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGS--ENIRVKNIILSNKHDVVKPAWLLECFKTKSFVP   89 (263)
T ss_dssp             TTCEEEECCCC--CCHHHHHHHHHHTTCEECSSCCTTEEEEECSS--CCHHHHHHHHSCSCCEECHHHHHHHHHHTSCCC
T ss_pred             CCeEEEEEcCCCCCCHHHHHHHHHHcCCEEEecCCCCEEEEEeCC--CCHHHHHHHhcCCCCEeehHHHHHHHhcCCcCC
Confidence            3456665 554332  33458899999999977 66677789875  5688777764    9999999999999999999


Q ss_pred             CCccee
Q 048173          323 ESFYML  328 (359)
Q Consensus       323 Ee~Y~L  328 (359)
                      .+||.+
T Consensus        90 ~~p~~~   95 (263)
T 3ii6_X           90 WQPRFM   95 (263)
T ss_dssp             CCGGGE
T ss_pred             CCHHHH
Confidence            988843

>1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A*

Probab=98.36  E-value=7.5e-07  Score=81.50  Aligned_cols=71  Identities=10%  Similarity=0.088  Sum_probs=53.7

Q ss_pred             CcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEEE
Q 048173           63 GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFASV  139 (359)
Q Consensus        63 g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~  139 (359)
                      |+|||.+.+......  ...+-.++|+|+|||+|||+.|++++++.+.    ..+.+++..   .+..||+++  ||...
T Consensus        62 g~~vG~~~~~~~~~~--~~~~~~l~v~p~~rg~Gig~~Ll~~~~~~~~----~~~~~~~~~~~~~a~~~y~~~--Gf~~~  133 (318)
T 1p0h_A           62 GPIIGYLNLSPPRGA--GGAMAELVVHPQSRRRGIGTAMARAALAKTA----GRNQFWAHGTLDPARATASAL--GLVGV  133 (318)
T ss_dssp             CCEEEEEEEECC-----CCCEEEEEECGGGCSSSHHHHHHHHHHHHTT----TCCEEEEGGGCHHHHHHHHHT--TCEEE
T ss_pred             CcEEEEEEEECCCCC--CcEEEEEEECccccCCCHHHHHHHHHHHhhc----CEEEEEEcCCCHHHHHHHHHC--CCeeE
Confidence            899999987654332  2335568999999999999999999998762    345555543   488999999  99987


Q ss_pred             Ee
Q 048173          140 AE  141 (359)
Q Consensus       140 ~e  141 (359)
                      ..
T Consensus       134 ~~  135 (318)
T 1p0h_A          134 RE  135 (318)
T ss_dssp             EE
T ss_pred             eE
Confidence            74

>3p2h_A AHL synthase; acyl-ACP binding, SAM binding, signaling protein-I MTA complex, signaling protein-inhibitor complex; HET: MTA NOO; 2.00A {Burkholderia glumae} PDB: 3p2f_A*

Probab=98.27  E-value=3.4e-06  Score=76.28  Aligned_cols=78  Identities=9%  Similarity=-0.040  Sum_probs=63.1

Q ss_pred             CCCcEEEEEEeeecC------------------CCCceeeeeEEEeccCc-cc----cChHHHHHHHHHHHHHHcCCcEE
Q 048173           61 NLGKVVAAVIYQIVP------------------ADTQYAEVPLAAVSSIY-QH----KGVGRLLYLKLRKRLQSVGIRTI  117 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~------------------~d~~~a~I~~~AV~~~~-Qg----kGIG~~Lv~~l~~~lk~~GI~~I  117 (359)
                      ++|++||++++....                  .+....+|..|||+++| |+    .++|..|+.++.+.+++.|++.+
T Consensus        60 ~~g~~vgt~Rll~~~~~~~l~~~f~~l~~~~~p~~~~~~EisR~aV~~~~rR~~~g~~~~~~~L~~~~~~~a~~~g~~~~  139 (201)
T 3p2h_A           60 ANGEICGCARLLPTTRPYLLQEVFPHLLADEAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAVECAARRGARQL  139 (201)
T ss_dssp             TTSCEEEEEEEEETTSCCHHHHTCGGGCSSCCCCCTTEEEEEEEEEC----------CTTHHHHHHHHHHHHHHTTCSEE
T ss_pred             CCCeEEEEEEeccccCCccccccChhhcCCccCCCCCEEEEEEEEEcchhcccccccChHHHHHHHHHHHHHHHCCCCEE
Confidence            478999999987531                  13567899999999999 54    34699999999999999999999


Q ss_pred             EEEeccccHHHHhhcccCcEEEE
Q 048173          118 FCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus       118 ~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      ++.+......||++.  ||....
T Consensus       140 ~~~aq~~~~~~y~rl--G~~~~~  160 (201)
T 3p2h_A          140 IGVTFCSMERMFRRI--GVHAHR  160 (201)
T ss_dssp             EEEEEHHHHHHHHHH--TCEEEE
T ss_pred             EEEECHHHHHHHHHc--CCCeEE
Confidence            999999999999999  999643

>1kzf_A Acyl-homoserinelactone synthase ESAI; alpha-beta, autoinducer synthase, quorum sensing, bacterial pathogenesis, ligase; 1.80A {Pantoea stewartii subsp} SCOP: d.108.1.3 PDB: 1k4j_A

Probab=98.26  E-value=1.3e-06  Score=80.71  Aligned_cols=80  Identities=13%  Similarity=0.177  Sum_probs=68.0

Q ss_pred             CCCcEEEEEEeeecCC------------------CCceeeeeEEEeccCccccC-------hHHHHHHHHHHHHHHcCCc
Q 048173           61 NLGKVVAAVIYQIVPA------------------DTQYAEVPLAAVSSIYQHKG-------VGRLLYLKLRKRLQSVGIR  115 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~------------------d~~~a~I~~~AV~~~~QgkG-------IG~~Lv~~l~~~lk~~GI~  115 (359)
                      ++|++||++++.....                  ... .+|.-|||+++ |++|       +|..|+.++++.+++.|++
T Consensus        79 ~~g~~Vgt~RLlp~~~~~~l~~~f~~~~~~~~~p~~~-~Ei~R~aV~~~-r~~g~~~~~~~v~~~L~~al~~~a~~~G~~  156 (230)
T 1kzf_A           79 CEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYG-TESSRFFVDKA-RARALLGEHYPISQVLFLAMVNWAQNNAYG  156 (230)
T ss_dssp             ETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSC-EEEEEEEECHH-HHHHHHCTTCCHHHHHHHHHHHHHHHTTCS
T ss_pred             cCCeEEEEEeecCCCcchhhcCcChhhcCCccCCCCC-eEEEEEEEccc-cccccccchhHHHHHHHHHHHHHHHHCCCC
Confidence            4789999999874321                  123 68999999999 8886       9999999999999999999


Q ss_pred             EEEEEeccccHHHHhhcccCcEE--EEeecc
Q 048173          116 TIFCWDDKESSFFFLKQVQDFAS--VAEVDT  144 (359)
Q Consensus       116 ~I~l~a~~~A~~Fw~K~~~GF~~--~~e~~~  144 (359)
                      .+++.+...+..||++.  ||..  +++.-.
T Consensus       157 ~l~~~aq~~~~~fy~r~--G~~~~~~G~~~~  185 (230)
T 1kzf_A          157 NIYTIVSRAMLKILTRS--GWQIKVIKEAFL  185 (230)
T ss_dssp             EEEEEEEHHHHHHHHHH--CCCCEEEEEEES
T ss_pred             EEEEEeCHHHHHHHHHc--CCCeEECCCCee
Confidence            99999999999999999  9974  666433

>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.19  E-value=1.4e-06  Score=74.03  Aligned_cols=66  Identities=26%  Similarity=0.380  Sum_probs=51.1

Q ss_pred             HHHHHhcCcEEecC-CCCeeEEEeCCC--CCcHHHHhh----cc---cccCHHHHHHHHhCCCCCCCC-cceecCcc
Q 048173          267 VHLTKNLRGAVTSD-GITSTHVVAGKV--RKTLNFFTA----LS---WIVSPSWLKESFGEGRFVDES-FYMLNDDG  332 (359)
Q Consensus       267 ~klik~LGG~V~~d-~~~~THLVa~~~--~RT~KfL~A----Ia---wIVsp~WL~eS~k~g~flDEe-~Y~L~D~e  332 (359)
                      .++++..|+.|.+. .+.+||||+...  .+..+++..    .+   +||+.+|+.||.++|+.+||+ .|.|.++.
T Consensus        42 ~~l~r~~G~~V~~~ls~~VTHVVve~~~~~e~~~~l~~~~l~~~~~~~lv~i~Wl~esmk~g~lv~ee~~~~l~~~~  118 (120)
T 2coe_A           42 MELARRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIGAGKPVEMTGKHQLSGPS  118 (120)
T ss_dssp             HHHHHHHTCEECSSCCTTCCEEEESSCCHHHHHHHHHHCCCCCSSCCEEEEHHHHHHHHHTTSCCCCSSSSBCCCSC
T ss_pred             HHHHHHcCCEEeeccCCCcCEEEecCCCHHHHHHHHhccccccccccEEeecHHHHHHHHcCCccCcccceEeccCC
Confidence            36778999999988 889999999743  234444542    32   999999999999999999995 45576653

>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}

Probab=98.01  E-value=3.3e-06  Score=78.13  Aligned_cols=79  Identities=13%  Similarity=0.140  Sum_probs=41.8

Q ss_pred             ceEEEEcccCcchH---HHHHHHhcCcEEecCCCCee-EEEeCCCC--C-----cHH-HHh-h---------cccccCHH
Q 048173          252 CFRITLMNIADDSK---KVHLTKNLRGAVTSDGITST-HVVAGKVR--K-----TLN-FFT-A---------LSWIVSPS  309 (359)
Q Consensus       252 ~prI~fSgl~~e~k---k~klik~LGG~V~~d~~~~T-HLVa~~~~--R-----T~K-fL~-A---------IawIVsp~  309 (359)
                      +.+|.|++..++..   ...+++.+||+++++...+| |||+....  |     .++ -+. .         +..||+|+
T Consensus       163 g~~~yl~~~~~~~~~~~l~~~i~~~GG~v~~~l~~~t~hVV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iV~~~  242 (264)
T 1z56_C          163 NRIAYVPRRKISTEDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDTIPKIARVVAPE  242 (264)
T ss_dssp             -----------------CHHHHHHHTTSCCCCSSSCSEEECCCSSTTTHHHHSSHHHHTTTTTTTSSSSCCCCCEEECTH
T ss_pred             CeEEEEecCCCchhHHHHHHHHHHcCCEEecccCCCEEEEEeCCCccchHHHHHHHHHHHHhhcccccccCCCCEEecHH
Confidence            45666766533222   13668999999998844555 55543211  1     111 111 1         12899999


Q ss_pred             HHHHHHhCCCCCCCCcceecC
Q 048173          310 WLKESFGEGRFVDESFYMLND  330 (359)
Q Consensus       310 WL~eS~k~g~flDEe~Y~L~D  330 (359)
                      ||.+|++.|+.+||++|.+.|
T Consensus       243 Wv~dci~~~~ll~e~~Y~~~~  263 (264)
T 1z56_C          243 WVDHSINENCQVPEEDFPVVN  263 (264)
T ss_dssp             HHHHHHTTSCCCSSCCC----
T ss_pred             HHHHHHHcCCcCCHHHcCCCC
Confidence            999999999999999997654

>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}

Probab=97.82  E-value=6.7e-06  Score=76.09  Aligned_cols=62  Identities=11%  Similarity=0.114  Sum_probs=49.4

Q ss_pred             HHHHHHHhcCcEEecC--C-C---CeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCCCccee
Q 048173          265 KKVHLTKNLRGAVTSD--G-I---TSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYML  328 (359)
Q Consensus       265 kk~klik~LGG~V~~d--~-~---~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L  328 (359)
                      ...++|+++||.++.+  . +   ..||+|+++  .|.|+-.++.   .||+|+||.+|.++|+.++.++|.+
T Consensus        30 ~L~~li~~~GG~~~~~~~~~t~~~~~~~iI~~~--~t~k~~~~~~~~~~vV~p~Wv~dci~~~~llp~~~y~~  100 (264)
T 1z56_C           30 ELEKTIVEHGGKLIYNVILKRHSIGDVRLISCK--TTTECKALIDRGYDILHPNWVLDCIAYKRLILIEPNYC  100 (264)
T ss_dssp             CTHHHHHHHHTTSCCCSSCCCCCSSCCEEEECS--CCGGGGGGTTTTCCCBCSSTTHHHHSSCSCCCCCSCBS
T ss_pred             HHHHHHHHcCCEEeecCCCCccCccceEEEecC--CcHHHHHHHhCCCCEEechHHHHHhhcCCCCCCChHHh
Confidence            3468999999987654  1 1   147999985  5777766554   8999999999999999999999854

>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*

Probab=97.77  E-value=3.4e-05  Score=62.32  Aligned_cols=67  Identities=22%  Similarity=0.312  Sum_probs=48.3

Q ss_pred             CceEEEEc-ccCcchHHHHHHHhcCcEEecC--CCCeeEEEeCCCCCcHHHHhhcc-cccCHHHHHHHHhCCCCCCCC
Q 048173          251 KCFRITLM-NIADDSKKVHLTKNLRGAVTSD--GITSTHVVAGKVRKTLNFFTALS-WIVSPSWLKESFGEGRFVDES  324 (359)
Q Consensus       251 ~~prI~fS-gl~~e~kk~klik~LGG~V~~d--~~~~THLVa~~~~RT~KfL~AIa-wIVsp~WL~eS~k~g~flDEe  324 (359)
                      .+.++.+. ++.+.....+.+-.+||.|+.+  .+++||+|+++.    +   --. -+|+|+||.||..+|+.|++.
T Consensus        18 sg~~~~l~~~v~~~~~l~RyiiAfgG~v~~~~~~~~vTHvI~~~~----~---~~~~~~V~p~WI~dcI~k~~Ll~~~   88 (88)
T 3pc7_A           18 TGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMTSATHVLGSRD----K---NPAAQQVSPEWIWACIRKRRLVAPS   88 (88)
T ss_dssp             TTCEECCCTTSTTHHHHHHHHHHTTCEECCGGGGGGCSEEESCCT----T---CTTSEEECHHHHHHHHHHTSCCSCC
T ss_pred             cCeEEEccCCcCchhhheeeeeecCCEEecccCCCcCeEEecCCC----c---CCCCcEEchHHHHHHHhCCcccCCC
Confidence            44555553 3333223457788999999775  568999998764    1   111 889999999999999999863

>1bob_A HAT1, histone acetyltransferase; histone modification, acetyl coenzyme A binding-protein; HET: ACO; 2.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1

Probab=97.74  E-value=4.6e-05  Score=74.26  Aligned_cols=61  Identities=21%  Similarity=0.182  Sum_probs=50.0

Q ss_pred             CCCcEEEEEEeeec--CCC----------CceeeeeEEEeccCccccChHHHHHHHHH-HHHHHcCCcEEEEEe
Q 048173           61 NLGKVVAAVIYQIV--PAD----------TQYAEVPLAAVSSIYQHKGVGRLLYLKLR-KRLQSVGIRTIFCWD  121 (359)
Q Consensus        61 ~~g~IVgvi~l~i~--~~d----------~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~-~~lk~~GI~~I~l~a  121 (359)
                      .++.+||.+.++..  +++          ..+..|.+|.|.|.|||+|+|+.|+++++ ..++..|+.+|-+..
T Consensus       183 ~~~~ivG~~t~y~~~~~~~~~~f~~~~~~~~R~rIsq~lVlPpyQgkGiG~~Ll~~i~~~~~~~~~i~~ItVeD  256 (320)
T 1bob_A          183 KTKELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVED  256 (320)
T ss_dssp             TTCCEEEEEEEEEECCC---------CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEESS
T ss_pred             cCCcEEEEEEEEeeeccCCcccccccccCCceEEEEEEEEcHHHhCCCHHHHHHHHHHHHHHhcCCCceEEEEC
Confidence            36899998887643  234          67899999999999999999999999999 788888888876543

>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*

Probab=97.71  E-value=3.5e-05  Score=66.72  Aligned_cols=65  Identities=23%  Similarity=0.283  Sum_probs=51.3

Q ss_pred             HHHHHhcCcEEecC-CCCeeEEEeCCC--CCcHHHHh--------hcc--cccCHHHHHHHHhCCCCCCCC-cceecCc
Q 048173          267 VHLTKNLRGAVTSD-GITSTHVVAGKV--RKTLNFFT--------ALS--WIVSPSWLKESFGEGRFVDES-FYMLNDD  331 (359)
Q Consensus       267 ~klik~LGG~V~~d-~~~~THLVa~~~--~RT~KfL~--------AIa--wIVsp~WL~eS~k~g~flDEe-~Y~L~D~  331 (359)
                      .+++.+-|+.|.+. ...+||||+...  .|.+..|.        +..  ++|+.+|+.+|+++|+.||++ .|.|.+.
T Consensus        32 ~~la~~kGf~v~~~~S~~VTHVV~E~~s~~~~~~~L~~~~~~l~~~~~~~~lLdisWltecm~~g~pV~~e~~~~l~~~  110 (133)
T 2dun_A           32 TGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLDISWLTESLGAGQPVPVECRHRLEVA  110 (133)
T ss_dssp             HHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEEHHHHHHHHHHTSCCCCCTTTSCCCC
T ss_pred             HHHHHhcCCEeccccCCCceEEEecCCCHHHHHHHHHHhhcccCcCCCCcEEeccHHHHHHHhcCCcCCcccceEeecc
Confidence            47788999999988 888999999764  35665551        223  999999999999999999994 5566654

>3shp_A Putative acetyltransferase STHE_0691; PSI-biology, midwest center for structural genomics, MCSG; HET: SRT; 2.21A {Sphaerobacter thermophilus}

Probab=97.64  E-value=9.8e-05  Score=62.65  Aligned_cols=72  Identities=8%  Similarity=-0.124  Sum_probs=58.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeE----EEeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEeccc---cHHHHhhc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPL----AAVSSIYQHKGVGRLLYLKLRKRLQ-SVGIRTIFCWDDKE---SSFFFLKQ  132 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~----~AV~~~~QgkGIG~~Lv~~l~~~lk-~~GI~~I~l~a~~~---A~~Fw~K~  132 (359)
                      ++|++||.+.+   .+..+.++|+.    +.++++|||    +.++..+.+.+. .+|+++|.+.+...   |..+|+|+
T Consensus        68 ~~~~~iG~~~l---~~~~~~~eig~~~~~~i~~~~~~G----~ea~~~ll~~af~~~~~~~i~~~v~~~N~~s~~l~ek~  140 (176)
T 3shp_A           68 SDEAVVGSCRI---EFGKQTASLRFHMAPWLDDADVLR----AEALELVVPWLRDEHELLVITVEIAADEQRTLAAAEAA  140 (176)
T ss_dssp             TTCCEEEEEEE---EECSSEEEEEEEECTTCSCHHHHH----HHHHHHHHHHHHHHSCCSEEEEEEETTCHHHHHHHHHT
T ss_pred             CCCcEEEEEEE---ecCCCEEEEEEeecceecChhHhh----HHHHHHHHHHHHhhCCeEEEEEEEcCCCHHHHHHHHHC
Confidence            68899999987   23335688887    655999999    667777777774 58999998888774   99999999


Q ss_pred             ccCcEEEEe
Q 048173          133 VQDFASVAE  141 (359)
Q Consensus       133 ~~GF~~~~e  141 (359)
                        ||+..+.
T Consensus       141 --GF~~~G~  147 (176)
T 3shp_A          141 --GLKAAVR  147 (176)
T ss_dssp             --TCEEEEE
T ss_pred             --CCEEEEE
Confidence              9999886

>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3

Probab=97.61  E-value=6.4e-05  Score=67.56  Aligned_cols=84  Identities=11%  Similarity=0.089  Sum_probs=52.2

Q ss_pred             CCCceEEEEcc-cCc--chHHHHHHHhcCcEEecCCC------CeeEE-EeCCC--CCcHH--HHhhcc--cccCHHHHH
Q 048173          249 NGKCFRITLMN-IAD--DSKKVHLTKNLRGAVTSDGI------TSTHV-VAGKV--RKTLN--FFTALS--WIVSPSWLK  312 (359)
Q Consensus       249 ~~~~prI~fSg-l~~--e~kk~klik~LGG~V~~d~~------~~THL-Va~~~--~RT~K--fL~AIa--wIVsp~WL~  312 (359)
                      .-.+.+|.|++ +..  ......+|+..||.++.+..      .+||+ |+...  .+..+  .+..-.  .||+++||.
T Consensus       117 lF~g~~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~l~~~~~i~iVs~~Wll  196 (229)
T 1l0b_A          117 LFEGLQIYCCEPFTNMPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVMWDWVL  196 (229)
T ss_dssp             CCTTCEEEECSCCSSSCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------CEEETHHHH
T ss_pred             hhcCceEEEEecCCCCCHHHHHHHHHHCCCEEeCCcccccccCCCceEEEEcCCccchhhhHHHHHHHcCCeEeehhHHH
Confidence            33566788865 332  23345889999999998733      35774 44422  12222  222112  999999999


Q ss_pred             HHHhCCCCCCCCcceecCcc
Q 048173          313 ESFGEGRFVDESFYMLNDDG  332 (359)
Q Consensus       313 eS~k~g~flDEe~Y~L~D~e  332 (359)
                      +|..+++.+++++|.|....
T Consensus       197 dsI~~~~~~~~~~Y~l~~~~  216 (229)
T 1l0b_A          197 DSISVYRCRDLDAYLVQNIT  216 (229)
T ss_dssp             HHHHTTSCCCGGGGBCC---
T ss_pred             HHHhcCCcCCccceEccccc
Confidence            99999999999999998654

>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*

Probab=97.59  E-value=5.3e-05  Score=68.22  Aligned_cols=69  Identities=16%  Similarity=0.196  Sum_probs=52.3

Q ss_pred             EEEcccCc--chHHHHHHHhcCcEEecCCCCeeEEEeCCCCCcHHHHhhcc--cccCHHHHHHHHhCCCCCCCCcceec
Q 048173          255 ITLMNIAD--DSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS--WIVSPSWLKESFGEGRFVDESFYMLN  329 (359)
Q Consensus       255 I~fSgl~~--e~kk~klik~LGG~V~~d~~~~THLVa~~~~RT~KfL~AIa--wIVsp~WL~eS~k~g~flDEe~Y~L~  329 (359)
                      ++++++..  .+....+|+..||+|+.+...++++|++...+      ...  .+|+|+||.||..+++.+|+++|.+.
T Consensus       126 ~~v~~~~~~~~~~L~~lI~~~GG~v~~~~~~~~iiI~~~~~~------~~~~~~~V~p~Wi~DsI~~~~llp~~~Y~~~  198 (199)
T 3u3z_A          126 MFVSPASSPPVAKLCELVHLCGGRVSQVPRQASIVIGPYSGK------KKATVKYLSEKWVLDSITQHKVCAPENYLLS  198 (199)
T ss_dssp             EEECTTCSSCHHHHHHHHHHTTCCBCSSGGGCSEEESCCCSC------CCTTCEEECHHHHHHHHHHTSCCCGGGGBCC
T ss_pred             EEECCCCCCCHHHHHHHHHHcCCEEeccCCCCEEEEeCCchh------ccCCCcEEChhHHHHHHHcCCcCChHhccCC
Confidence            44455432  24456889999999999977888888653221      112  99999999999999999999999875

>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*

Probab=97.55  E-value=2e-05  Score=76.87  Aligned_cols=52  Identities=17%  Similarity=0.035  Sum_probs=42.6

Q ss_pred             HHHHHHhcCcEEecC-CCCeeEEEeCC---CCCcHHHHhhcc---cccCHHHHHHHHhC
Q 048173          266 KVHLTKNLRGAVTSD-GITSTHVVAGK---VRKTLNFFTALS---WIVSPSWLKESFGE  317 (359)
Q Consensus       266 k~klik~LGG~V~~d-~~~~THLVa~~---~~RT~KfL~AIa---wIVsp~WL~eS~k~  317 (359)
                      ..+.+++|||.+++- .+.|||||+.+   .+=|+|.|+|+.   +||+|+||++-.+.
T Consensus       129 L~~~L~~LGik~v~~~~detTHlVm~krnT~KvTvK~L~ALI~gkPIV~~~Fl~al~~~  187 (325)
T 3huf_A          129 WASNLNLLGIPTGLRDSDATTHFVMNRQAGSSITVGTMYAFLKKTVIIDDSYLQYLSTV  187 (325)
T ss_dssp             HHHHHHTTTCCEESSCCTTCCEEECCCCCSSCCCHHHHHHHHTTCEEECHHHHHHHTTC
T ss_pred             HHHHHHHcCCEEEEccCCCEEEEEEeccccccchHHHHHHHHCCCcEecHHHHHHHHHh
Confidence            346789999999833 56799999974   345899999987   99999999998753

>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A

Probab=97.48  E-value=8.5e-05  Score=65.71  Aligned_cols=80  Identities=13%  Similarity=0.154  Sum_probs=53.2

Q ss_pred             CCceEEEEcc-cCc--chHHHHHHHhcCcEEecCCCC------eeEEE-eCCCCCc--HHHHhhcc-----cccCHHHHH
Q 048173          250 GKCFRITLMN-IAD--DSKKVHLTKNLRGAVTSDGIT------STHVV-AGKVRKT--LNFFTALS-----WIVSPSWLK  312 (359)
Q Consensus       250 ~~~prI~fSg-l~~--e~kk~klik~LGG~V~~d~~~------~THLV-a~~~~RT--~KfL~AIa-----wIVsp~WL~  312 (359)
                      =...+|+|++ +..  ......+|+..||.++.+...      .+|+| +.....+  .++ .+++     .||+++||.
T Consensus       116 F~g~~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~ivi~~~~~~~~~~~~-~~~a~~~~~~iV~~~Wi~  194 (214)
T 1t15_A          116 FRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGF-HAIGQMCEAPVVTREWVL  194 (214)
T ss_dssp             TTTCEEEECSCCSSSCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGG-GSSTTTCSSCEEEHHHHH
T ss_pred             cCCCEEEEEecCCCCCHHHHHHHHHHCCCEEecCccccccCCCCccEEEECCCcccchhhH-HHHHHhcCCcEEeccHHH
Confidence            3456788866 322  234457889999999987322      13443 3322221  122 2222     999999999


Q ss_pred             HHHhCCCCCCCCcceecC
Q 048173          313 ESFGEGRFVDESFYMLND  330 (359)
Q Consensus       313 eS~k~g~flDEe~Y~L~D  330 (359)
                      ||..+++.+|+++|.+.+
T Consensus       195 dsi~~~~~l~~~~Y~l~~  212 (214)
T 1t15_A          195 DSVALYQCQELDTYLIPQ  212 (214)
T ss_dssp             HHHHHTSCCCSGGGBCCC
T ss_pred             HhHhhcCcCCCcceeecc
Confidence            999999999999998875

>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A

Probab=97.45  E-value=0.00036  Score=58.03  Aligned_cols=71  Identities=13%  Similarity=0.084  Sum_probs=56.6

Q ss_pred             CCCCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCC
Q 048173          248 PNGKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEG  318 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g  318 (359)
                      .+-...+|+|||.-+.   .....+|+.+||.|+.+ ..++||||++....+-|+-.|..   .||+.+|+.+.+..+
T Consensus        31 ~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~~lgI~Ii~E~~f~~ll~~~  108 (109)
T 2k6g_A           31 NCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRNL  108 (109)
T ss_dssp             TTTTTCEEEEESBCSSCCHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTCEEECHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeeeCCCCCHHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHHHcCCeEEeHHHHHHHHHhC
Confidence            3467789999998753   33357899999999998 67899999997655567766655   999999999988654

>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.35  E-value=0.00073  Score=56.59  Aligned_cols=69  Identities=13%  Similarity=0.107  Sum_probs=56.2

Q ss_pred             CCCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhC
Q 048173          249 NGKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGE  317 (359)
Q Consensus       249 ~~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~  317 (359)
                      +-...+|+|||.-+.   ....++|+.+||.|+.+ ..++||||++.-..+-|+-.|..   .||+.+|+.+.+..
T Consensus        22 ~l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~~lgI~IisE~~f~~ll~~   97 (112)
T 2ebu_A           22 CLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRT   97 (112)
T ss_dssp             SSTTCEEEECSCCSSSCHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHHHHTCEEEEHHHHHHHHHH
T ss_pred             CcCCCEEEEeeeCCCCCHHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHHHcCCeEEeHHHHHHHHhh
Confidence            456789999998753   33357899999999998 67899999998666677777765   99999999999874

>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2

Probab=97.20  E-value=0.00051  Score=55.42  Aligned_cols=68  Identities=13%  Similarity=0.057  Sum_probs=53.1

Q ss_pred             CCCCceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHh
Q 048173          248 PNGKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFG  316 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k  316 (359)
                      ++-...+|+|||.-+.  .....+|+.+||.|+.+ ..++||||++... .-|+-.|..   .||+.+|+.+++.
T Consensus         6 ~~l~G~~~v~TG~l~~~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~-gsK~~kA~~lgI~Ii~E~~f~~~l~   79 (92)
T 1l7b_A            6 EALKGLTFVITGELSRPREEVKALLRRLGAKVTDSVSRKTSYLVVGENP-GSKLEKARALGVPTLTEEELYRLLE   79 (92)
T ss_dssp             CSSTTCEEECSTTTTSCHHHHHHHHHHTTCEEESCCSSSCCCBEECSSS-STTHHHHHCSSSCCEEHHHHHHHHH
T ss_pred             CCcCCcEEEEecCCCCCHHHHHHHHHHcCCEEeCcccCCeeEEEeCCCC-ChHHHHHHHcCCcEEeHHHHHHHHH
Confidence            3456788999998764  22347889999999998 7789999999643 366666655   9999999998875

>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A

Probab=96.99  E-value=0.00057  Score=60.98  Aligned_cols=75  Identities=11%  Similarity=0.048  Sum_probs=50.7

Q ss_pred             CCceEEEEccc-Cc--chHHHHHHHhcCcEEecC------------------------CCCeeEEEeCCCCCcHHHHhhc
Q 048173          250 GKCFRITLMNI-AD--DSKKVHLTKNLRGAVTSD------------------------GITSTHVVAGKVRKTLNFFTAL  302 (359)
Q Consensus       250 ~~~prI~fSgl-~~--e~kk~klik~LGG~V~~d------------------------~~~~THLVa~~~~RT~KfL~AI  302 (359)
                      =....|++++- ..  .+....+|+..||.++..                        ...|||+|...+.+-.+--.+.
T Consensus       105 F~g~~~~l~~~~~~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~~t~~iv~~~~~~~~~~~~~  184 (210)
T 2nte_A          105 FDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCNYHPERVR  184 (210)
T ss_dssp             TTTCEEEECSCCSSSCHHHHHHHHHHTTCEEESSCCCGGGCGGGSSCCCCTTSCTTCGGGTCCEEEEECSCSSCCCSCSE
T ss_pred             cCceEEEEeccCCCCCHHHHHHHHHHCCCEEEecCCCCccccccccceeeeccCCCcccccceEEEEeccccccCHHHHh
Confidence            34567888763 22  244468899999998852                        1458999887653211110121


Q ss_pred             -c--cccCHHHHHHHHhCCCCCCCC
Q 048173          303 -S--WIVSPSWLKESFGEGRFVDES  324 (359)
Q Consensus       303 -a--wIVsp~WL~eS~k~g~flDEe  324 (359)
                       .  ++|+++||.||..+++.+|.+
T Consensus       185 ~~~v~~V~~~Wl~dcI~~~~llp~~  209 (210)
T 2nte_A          185 QGKVWKAPSSWFIDCVMSFELLPLD  209 (210)
T ss_dssp             ETTEEEEEHHHHHHHHHHTSCCCSC
T ss_pred             ccCcccccHHHHHHHHHhCeeccCC
Confidence             1  899999999999999999865

>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A

Probab=96.84  E-value=0.0017  Score=58.33  Aligned_cols=82  Identities=10%  Similarity=0.030  Sum_probs=54.9

Q ss_pred             CCceEEEEcccCc-c-hHHHHHHHhcCcEEecCCCC---eeEEEeCCCCC--cHHHHhhcc-cccCHHHHHHHHhCCCCC
Q 048173          250 GKCFRITLMNIAD-D-SKKVHLTKNLRGAVTSDGIT---STHVVAGKVRK--TLNFFTALS-WIVSPSWLKESFGEGRFV  321 (359)
Q Consensus       250 ~~~prI~fSgl~~-e-~kk~klik~LGG~V~~d~~~---~THLVa~~~~R--T~KfL~AIa-wIVsp~WL~eS~k~g~fl  321 (359)
                      -.+.+|.+++... . .....+|+..||.|+.....   -+|+|.....-  +...+..-. +||+++||.+|...+++ 
T Consensus       116 F~g~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~~~~~~~~~ivI~~~~d~~~~~~~~~~~i~vvs~eWi~~sI~~q~l-  194 (209)
T 2etx_A          116 LEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEFLLTGVLKQEA-  194 (209)
T ss_dssp             TTTCEEEECTTCSSCHHHHHHHHHHTTCEECSSCCCSCCTTEEEECCGGGGGGCHHHHHHTCCEECTHHHHHHHHHTCC-
T ss_pred             cCCcEEEEeCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCceEEEECcccHHHHHHHHHCCCeEEcHHHHHHHHHhccc-
Confidence            3456788876532 2 34458899999999976322   25776654322  222222222 99999999999999775 


Q ss_pred             CCCcceecCcc
Q 048173          322 DESFYMLNDDG  332 (359)
Q Consensus       322 DEe~Y~L~D~e  332 (359)
                      |+++|.|..++
T Consensus       195 d~e~y~l~~~~  205 (209)
T 2etx_A          195 KPEAFVLSPLE  205 (209)
T ss_dssp             CGGGGBCCTTC
T ss_pred             ChHHheecCCC
Confidence            99999987654

>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A

Probab=96.62  E-value=0.0029  Score=52.93  Aligned_cols=70  Identities=13%  Similarity=0.130  Sum_probs=50.7

Q ss_pred             CCCceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCC--CCcHHHHhhcc---cccCHHHHHHHHhCC
Q 048173          249 NGKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKV--RKTLNFFTALS---WIVSPSWLKESFGEG  318 (359)
Q Consensus       249 ~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~--~RT~KfL~AIa---wIVsp~WL~eS~k~g  318 (359)
                      +-...+|+|||--..  ++..++|+.+||.|+.+ ..++||||++.-  .-.-|+-.|-.   .||+.+||.++...+
T Consensus        10 ~l~G~~~ViTG~l~~~R~e~k~~ie~~Ggkv~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~~l~~~~~~~   87 (113)
T 2cok_A           10 PLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDVSAST   87 (113)
T ss_dssp             SSSSCEEEECSCCSSCHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTHHHHHHHSCC
T ss_pred             CcCCCEEEEEecCCCCHHHHHHHHHHCCCEEcCccccCccEEEECCCCCCCChHHHHHHHCCCcEEeHHHHHHHHhhc
Confidence            356788999987653  23357889999999998 668899999831  12345555544   999999977666555

>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B

Probab=96.45  E-value=0.0038  Score=58.32  Aligned_cols=78  Identities=12%  Similarity=-0.009  Sum_probs=53.1

Q ss_pred             CCceEEEEcccCc-c--hHHHHHHHhcCcEEecCC-----------CCeeEEEeCCCCCcHHHHhhcc---cccCHHHHH
Q 048173          250 GKCFRITLMNIAD-D--SKKVHLTKNLRGAVTSDG-----------ITSTHVVAGKVRKTLNFFTALS---WIVSPSWLK  312 (359)
Q Consensus       250 ~~~prI~fSgl~~-e--~kk~klik~LGG~V~~d~-----------~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~  312 (359)
                      -++.+|.+++... .  .....+++..||.++...           ..+++||++.-..+.+..+|..   .||+.+||.
T Consensus       156 F~G~~I~i~~~~~~~~~~~~~~Il~~~Ga~vv~~~~s~~~~~d~~~~~~~viv~d~~~~~~~~~~a~~~~i~iVs~EWv~  235 (259)
T 1kzy_C          156 FQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWVI  235 (259)
T ss_dssp             TTTCEEEEEESCTTTTHHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTCCEECHHHHH
T ss_pred             CCCeEEEEecCCCCCHHHHHHHHHHhcCCEEEeccccchhhhhccCCCCeEEEECCCChHHHHHHHHhcCCCEecHHHHH
Confidence            3567788866542 1  234568899999876541           2345566654334444444444   999999999


Q ss_pred             HHHhCCCCCCCCcce
Q 048173          313 ESFGEGRFVDESFYM  327 (359)
Q Consensus       313 eS~k~g~flDEe~Y~  327 (359)
                      +|...|+.+|++.|.
T Consensus       236 ~sI~~~~ll~~~~hp  250 (259)
T 1kzy_C          236 QCLIVGERIGFKQHP  250 (259)
T ss_dssp             HHHHHTSCCCTTSSG
T ss_pred             HHHHhCCcCCCCcCc
Confidence            999999999998763

>3dns_A Ribosomal-protein-alanine acetyltransferase; N-terminal domain of ribosomal-protein-alanine acetyltransfe MCSG, PSI; 2.10A {Clostridium acetobutylicum}

Probab=96.43  E-value=0.025  Score=48.81  Aligned_cols=76  Identities=14%  Similarity=0.114  Sum_probs=65.3

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccC---hHHHHHHHHHHHH-HHcCCcEEEEEecc-ccHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKG---VGRLLYLKLRKRL-QSVGIRTIFCWDDK-ESSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkG---IG~~Lv~~l~~~l-k~~GI~~I~l~a~~-~A~~Fw~K~~~G  135 (359)
                      ++|++||.+.+.-..|.-+.|+|+..-- ++  |+|   .|+.-+.-+.+.| .++++++|.+.+.. .|..-|+|+  |
T Consensus        27 ~~~~~IG~i~i~~Id~~nr~a~i~I~Ig-k~--gkG~~~ygtEAl~l~l~y~F~elnlhKi~l~v~~~~ai~~yeKl--G  101 (135)
T 3dns_A           27 KYGITIGRIFIVDLNKDNRFCMFRMKIY-KQ--GKSINTYIKEILSVFMEFLFKSNDINKVNIIVDEEVSTQPFVEL--G  101 (135)
T ss_dssp             TTCCEEEEEEEEEEETTTTEEEEEEEEC-CC--SSCCHHHHHHHHHHHHHHHHHHSCCSEEEEEEETTSCSHHHHHT--T
T ss_pred             CCCCEEEEEEEEEeccccCEEEEEEEEe-eC--CCChHHHHHHHHHHHHHHHHHhcCceEEEEEEecHHHHHHHHHc--C
Confidence            5789999999988888889998887665 55  999   9999888888876 58999999887776 499999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      |...+-
T Consensus       102 F~~EG~  107 (135)
T 3dns_A          102 FAFEGI  107 (135)
T ss_dssp             CEEEEE
T ss_pred             CeEeee
Confidence            998875

>1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, protein structure initiative; 1.70A {Pseudomonas aeruginosa} SCOP: d.108.1.8

Probab=96.20  E-value=0.013  Score=57.55  Aligned_cols=60  Identities=10%  Similarity=-0.192  Sum_probs=45.0

Q ss_pred             ecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH---cCCcEEEEEecc-----ccHHHHhhc
Q 048173           73 IVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS---VGIRTIFCWDDK-----ESSFFFLKQ  132 (359)
Q Consensus        73 i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~---~GI~~I~l~a~~-----~A~~Fw~K~  132 (359)
                      +...-+...||.-++|+|+|||+|+|++|.+.-.-.+.+   .=-.+|+..-+-     .-.|||+..
T Consensus       115 L~~d~tg~sEl~tLfl~p~~R~~G~G~lLS~~R~lfiA~~~~rF~~~v~AEmrG~~De~G~SPFW~~l  182 (342)
T 1yle_A          115 LCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAVVVEIVGYSDEQGESPFWNAV  182 (342)
T ss_dssp             EECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEEEEECCBCCCTTCCCHHHHHT
T ss_pred             eecCCCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHChhhhhhhhheeccCccCCCCCCccHhHh
Confidence            343345779999999999999999999999987666553   334566554433     367999998

>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*

Probab=94.07  E-value=0.09  Score=48.48  Aligned_cols=54  Identities=13%  Similarity=0.175  Sum_probs=37.4

Q ss_pred             HHHHHhcCcEE--ecC-CCCeeEEEeCCCCCcHHHHhhcc-cccCHHHHHHHHhCCCCCCC
Q 048173          267 VHLTKNLRGAV--TSD-GITSTHVVAGKVRKTLNFFTALS-WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       267 ~klik~LGG~V--~~d-~~~~THLVa~~~~RT~KfL~AIa-wIVsp~WL~eS~k~g~flDE  323 (359)
                      ..+++.+||.+  +.+ .+.-+|+|.... +..  ..... .||+++||.+|+..|+.+|.
T Consensus       184 ~~i~~~~Ga~~~~v~~~~~~~~d~v~~~~-~~~--~~~~~~~iV~~eWv~~~i~~g~~l~~  241 (241)
T 2vxb_A          184 VYHALALGADVEIRPNVAHLECDLILTMD-GNI--VDETNCPVVDPEWIVECLISQSDIST  241 (241)
T ss_dssp             HHHHHHTTCEEECCSCCSSCCCSEEECSS-SCC--CSSCSSCEECHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHcCCceecccccccCCccEEEECC-ccc--cccCCCCEecHHHHHHHHHhceecCC
Confidence            35778999999  433 334567777533 221  11112 99999999999999999984

>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}

Probab=93.06  E-value=0.063  Score=44.51  Aligned_cols=64  Identities=16%  Similarity=0.237  Sum_probs=47.8

Q ss_pred             hHHHHHHHhcCcEEecC-CCCe--eEEEeCCCCCcHHHHhhcc-cccCHHHHHHHHhCCCCCCCCcceecCcccc
Q 048173          264 SKKVHLTKNLRGAVTSD-GITS--THVVAGKVRKTLNFFTALS-WIVSPSWLKESFGEGRFVDESFYMLNDDGYV  334 (359)
Q Consensus       264 ~kk~klik~LGG~V~~d-~~~~--THLVa~~~~RT~KfL~AIa-wIVsp~WL~eS~k~g~flDEe~Y~L~D~e~E  334 (359)
                      +..+++|.+.||.|... +++.  .+.|+....-|       - ..|+|.||.+|...+.++|-++|++-=.+.|
T Consensus        33 d~L~~lI~~nGG~Vl~~lP~~s~~~~yVVSpyN~t-------~LpTVtpTYI~aC~~~nTLLnv~~YLvp~d~~~  100 (106)
T 2l42_A           33 DQLARLIRANGGEVLDSKPRESKENVFIVSPYNHT-------NLPTVTPTYIKACCQSNSLLNMENYLVPYDNLE  100 (106)
T ss_dssp             HHHHHHHHTTTSCCCEECCCCCSSCCCCBCTTCCC-------SSSBCCTTHHHHHHHSTTSCGGGGCCBCSCC--
T ss_pred             HHHHHHHHhcCcEEhhhCcccccCCeEEEeCCCCC-------CCccccHHHHHHHHhcCceecccccccCchhhc
Confidence            45568999999999876 2222  36666655444       3 8999999999999999999999988655544

>2p0w_A Histone acetyltransferase type B catalytic subuni; HAT1, structural genomics, structural genomics consortium, S transferase; HET: ACO; 1.90A {Homo sapiens}

Probab=92.67  E-value=0.18  Score=49.16  Aligned_cols=49  Identities=16%  Similarity=0.158  Sum_probs=40.3

Q ss_pred             cEEEEEEeee--cCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc
Q 048173           64 KVVAAVIYQI--VPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV  112 (359)
Q Consensus        64 ~IVgvi~l~i--~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~  112 (359)
                      .+||-...+-  .+++..+.-|-+|.|-|-|||+|+|+.|++.+.+.+...
T Consensus       200 ~~vGy~T~Y~f~~yp~~~R~RISQ~LILPPyQ~kG~G~~Ll~~iy~~~~~~  250 (324)
T 2p0w_A          200 ATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVHRYYTEF  250 (324)
T ss_dssp             EEEEEEEEEEEEETTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEEEEEeeecCCcccceeEEEEEcCcccccCcHHHHHHHHHHHHhcC
Confidence            4788555422  345777888999999999999999999999999998873

>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*

Probab=92.47  E-value=0.15  Score=46.92  Aligned_cols=81  Identities=11%  Similarity=0.118  Sum_probs=54.1

Q ss_pred             CceEEEEcccCcc-hHHHHHHHhcCcEEecCC-----CCeeEEEeCCCC---C--cHHHHhh--cc-cccCHHHHHHHHh
Q 048173          251 KCFRITLMNIADD-SKKVHLTKNLRGAVTSDG-----ITSTHVVAGKVR---K--TLNFFTA--LS-WIVSPSWLKESFG  316 (359)
Q Consensus       251 ~~prI~fSgl~~e-~kk~klik~LGG~V~~d~-----~~~THLVa~~~~---R--T~KfL~A--Ia-wIVsp~WL~eS~k  316 (359)
                      ...+|+|++-.+. ....++|+.-||+|....     .+.||++++...   .  ..++...  -. .||+++||.+++-
T Consensus       137 ~g~~v~l~~~~~~~~~l~~ii~agGg~vl~~~~~~~~~~~t~~~vd~~~~~~~~~~~~~~~~~~~~i~~v~~ewlld~i~  216 (235)
T 3al2_A          137 SGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRTEYIADYLM  216 (235)
T ss_dssp             TTCEEEEECCHHHHHHHHHHHHHTTCEECSSCCGGGGGGCSEEEECC--------CCCHHHHHHTTCEEEETHHHHHHHH
T ss_pred             CCcEEEEecCCCcHHHHHHHHHcCCcEEecCCCCCccccCceEEEecccCCccchhHHHHHHHHcCCcEEcHHHHHHHHh
Confidence            4466777653221 233578889999998652     457998876311   0  0123222  12 9999999999999


Q ss_pred             CCCCCCCCcceecCc
Q 048173          317 EGRFVDESFYMLNDD  331 (359)
Q Consensus       317 ~g~flDEe~Y~L~D~  331 (359)
                      .....+.+.|+|...
T Consensus       217 ~~~~~~~~~y~l~~~  231 (235)
T 3al2_A          217 QESPPHVENYCLPEA  231 (235)
T ss_dssp             CSSCCCHHHHBCGGG
T ss_pred             cCCCCChhheEcccc
Confidence            999999999988753

>4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A*

Probab=91.67  E-value=0.26  Score=49.15  Aligned_cols=63  Identities=14%  Similarity=0.138  Sum_probs=50.2

Q ss_pred             CCCCcEEEEEEeeec-----CCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE-EEEec
Q 048173           60 LNLGKVVAAVIYQIV-----PADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI-FCWDD  122 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~-----~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I-~l~a~  122 (359)
                      ..++++||.|.....     ..--+.+||-+++||+.+|+||++-.|++|+-.++...||=.. +.-+.
T Consensus       107 ~~~~kLVgfIsaiP~~irv~~~~~~~~eINFLCVHKklRsKrlAPvLIkEitRR~n~~gI~qAvyTag~  175 (385)
T 4b14_A          107 DASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGV  175 (385)
T ss_dssp             TTTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTTCCEEEEEESS
T ss_pred             ccCCeEEEEEeeeEEEEEEeceEeeeEEEEEEEEehhHhccCccHHHHHHHHHHhhccCceEEEEecCc
Confidence            368899999875432     2223679999999999999999999999999999999997554 44333

>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*

Probab=91.17  E-value=0.11  Score=52.64  Aligned_cols=41  Identities=15%  Similarity=0.263  Sum_probs=34.3

Q ss_pred             CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc
Q 048173           77 DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK  123 (359)
Q Consensus        77 d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~  123 (359)
                      ++..+|+..|||+|+|||.|+|..|++++++..     ++ .+|...
T Consensus       368 ~~~~aeL~kfaV~~~~~g~g~gd~l~~~i~~~~-----~~-L~Wrsr  408 (460)
T 3s6g_A          368 LDGWVYLDKFAVLDDARGEGLGRTVWNRMVDYA-----PQ-LIWRSR  408 (460)
T ss_dssp             ETTEEEEEEEEECHHHHHHTHHHHHHHHHHHHC-----SS-EEEEEE
T ss_pred             CCCCeEEEEEEEChhhhcCCHHHHHHHHHHHhC-----Cc-eEEEeC
Confidence            457899999999999999999999999999874     45 455444

>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}

Probab=90.09  E-value=0.88  Score=41.55  Aligned_cols=89  Identities=18%  Similarity=0.237  Sum_probs=62.1

Q ss_pred             CceEEEEcccCcchH-----HHHHHHhcCcEEecC--CCCeeEEEeCCC---CCcHHHHhhcc---cccCHHHHHHHHhC
Q 048173          251 KCFRITLMNIADDSK-----KVHLTKNLRGAVTSD--GITSTHVVAGKV---RKTLNFFTALS---WIVSPSWLKESFGE  317 (359)
Q Consensus       251 ~~prI~fSgl~~e~k-----k~klik~LGG~V~~d--~~~~THLVa~~~---~RT~KfL~AIa---wIVsp~WL~eS~k~  317 (359)
                      ..+.+++--++|-..     .-+-+..+|+.-...  .-++||+||...   .....++.|--   .||.|+|+.+|--.
T Consensus       163 sgitvclgpldplkeisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnnipivrpewvraceve  242 (290)
T 4gns_A          163 SGITVCLGPLDPLKEISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEESNEELIRAKHNNIPIVRPEWVRACEVE  242 (290)
T ss_dssp             TTCCEEECCCCGGGTCCHHHHHHHHHHTTCCCCBSSCCTTCCEEECSCCTTCTTCHHHHHHHHTTCCEECTHHHHHHHHT
T ss_pred             cCceEEecCCChhhhhhhccHHHHHHHhCCchhhheeeeecceeeecCCCcccchHHHHhhhccCCCccCHHHHHHHhhh
Confidence            344566655555321     124456789876655  678999999875   35566666654   99999999999999


Q ss_pred             CCCCCCCcceecCcc-cccccCC
Q 048173          318 GRFVDESFYMLNDDG-YVLKYRS  339 (359)
Q Consensus       318 g~flDEe~Y~L~D~e-~E~k~~f  339 (359)
                      ++.+.-..|.|..+. .-+-|.|
T Consensus       243 krivgvrgfyldadqsilksytf  265 (290)
T 4gns_A          243 KRIVGVRGFYLDADQSILKSYTF  265 (290)
T ss_dssp             TSCCCSGGGBTTSCGGGGGGGCC
T ss_pred             heeeeeeeEEEcccHHHHhhcCC
Confidence            999999998887443 3344544

>4hkf_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase, MEC-17, GNAT, acetyl-COA, GNAT FO transferase; HET: ACO; 1.70A {Danio rerio} PDB: 4h6u_A* 4h6z_A*

Probab=87.70  E-value=0.56  Score=42.68  Aligned_cols=50  Identities=20%  Similarity=0.100  Sum_probs=35.0

Q ss_pred             eeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhc
Q 048173           80 YAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQ  132 (359)
Q Consensus        80 ~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~  132 (359)
                      ...|.-|.|++++||+|+|+.+++..   |+..|+.-+-+-.+.   ....|-.|+
T Consensus       114 ~lcIlDFyV~es~QR~G~Gk~lfe~m---L~~e~i~p~rvA~DnPS~k~l~Fl~Kh  166 (191)
T 4hkf_A          114 PLCVLDFYVTETLQRHGYGSELFDFM---LKHKQVEPAQMAYDRPSPKFLSFLEKR  166 (191)
T ss_dssp             CEEEEEEEECGGGTTSSHHHHHHHHH---HHHHTCCGGGSEEESCCHHHHHHHHHH
T ss_pred             ccEEEeEEEeeeeeccCHHHHHHHHH---HHhcCCcceeeecCCchHHHHHHHHhc
Confidence            36788899999999999999976665   666676555222232   245676666

>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A*

Probab=86.77  E-value=1  Score=44.86  Aligned_cols=65  Identities=15%  Similarity=0.226  Sum_probs=51.2

Q ss_pred             cCCCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC-cEEEEEecc
Q 048173           59 FLNLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI-RTIFCWDDK  123 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI-~~I~l~a~~  123 (359)
                      ...+|++||-|......=     ....+||-+++||+..|+|+++-.|++|+-.++...|| +.|+.-+..
T Consensus       103 ~~~s~kLVgfIsaiP~~irv~~~~~~~~eINFLCVhKkLRsKrLAPvLIkEITRRvn~~gI~qAvYTag~v  173 (383)
T 3iu1_A          103 VVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVV  173 (383)
T ss_dssp             ETTTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTTCCCEEEEESSC
T ss_pred             EccCCeEEEEEecceEEEEEcceEeeeeEEEEEEEcHhHHhCCCcHHHHHHHHHHhhhcchhhheeeccee
Confidence            346899999887543221     22679999999999999999999999999999999998 444554433

>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A

Probab=85.87  E-value=1.3  Score=44.18  Aligned_cols=65  Identities=15%  Similarity=0.250  Sum_probs=50.9

Q ss_pred             cCCCCcEEEEEEeeecCC---C----CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC-cEEEEEecc
Q 048173           59 FLNLGKVVAAVIYQIVPA---D----TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI-RTIFCWDDK  123 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~---d----~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI-~~I~l~a~~  123 (359)
                      ...+|++||-|......=   +    ...+||-+++||...|+|+++-.|++|+-.+....|| +.|+.-+..
T Consensus        84 ~~~s~kLVgFIsgiP~~irv~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~gI~QAvYTagvv  156 (392)
T 1iyk_A           84 VKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSI  156 (392)
T ss_dssp             ETTTCCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEEEEECSC
T ss_pred             EcCCCcEEEEEeeeeEEEEEcCcCceEEEEEEEEEEEcHhHhhcCCcHHHHHHHHHHhhhccceeeeeecCcc
Confidence            346789999887643322   2    2479999999999999999999999999999999997 445554443

>1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A*

Probab=84.11  E-value=1.5  Score=44.19  Aligned_cols=65  Identities=15%  Similarity=0.172  Sum_probs=51.2

Q ss_pred             cCCCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC-cEEEEEecc
Q 048173           59 FLNLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI-RTIFCWDDK  123 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI-~~I~l~a~~  123 (359)
                      ...+|++||-|......=     --..++|-+++||...|+|+++-.|++|+-.+....|| +.|+.-+..
T Consensus       106 ~~~s~kLVgFIsgiP~~irv~~~~~~~~eINFLCVHKKLRsKRLAPVLIkEITRRvn~~gI~QAvYTagvv  176 (422)
T 1iic_A          106 VKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIV  176 (422)
T ss_dssp             ETTTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEEEEESSC
T ss_pred             EccCCcEEEEEeceeEEEEEcceEEEeeEEEEEEechhhhhccCcHHHHHHHHHHhhhcchheeeeecccc
Confidence            346789999888643322     12579999999999999999999999999999999997 444544443

>2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A*

Probab=83.96  E-value=2.4  Score=42.72  Aligned_cols=65  Identities=12%  Similarity=0.141  Sum_probs=50.6

Q ss_pred             cCCCCcEEEEEEeeecC------------------------C--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc
Q 048173           59 FLNLGKVVAAVIYQIVP------------------------A--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV  112 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~------------------------~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~  112 (359)
                      ...++++||-|.+....                        .  -...++|-+++||...|+|+++-.|++|+-.+....
T Consensus       116 ~~~~~kLVgFIsgiP~~irv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~  195 (421)
T 2wuu_A          116 RKADKKLLAFIAGVPVTLRMGTPKYMKVKAQEKGQEEEAAKYDAPRHICEINFLCVHKQLREKRLAPILIKEVTRRVNRT  195 (421)
T ss_dssp             ETTTCCEEEEEEEEEEEEECSCCHHHHHHHHHTTCHHHHHTTCSCEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHT
T ss_pred             EccCCcEEEEEeeeeEEEEecccccccccccccccccchhcccceeeeeeEEEEEechhHhhccCcHHHHHHHHHHhhhc
Confidence            34678999988764321                        1  125789999999999999999999999999999999


Q ss_pred             CC-cEEEEEecc
Q 048173          113 GI-RTIFCWDDK  123 (359)
Q Consensus       113 GI-~~I~l~a~~  123 (359)
                      || +.|+.-+..
T Consensus       196 gI~qAvYTag~v  207 (421)
T 2wuu_A          196 NVWQAVYTAGVL  207 (421)
T ss_dssp             TCCCEEEEESSC
T ss_pred             chhheeeecccc
Confidence            98 444554443

>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*

Probab=83.55  E-value=0.22  Score=52.86  Aligned_cols=68  Identities=13%  Similarity=0.049  Sum_probs=0.0

Q ss_pred             CCceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCC
Q 048173          250 GKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEG  318 (359)
Q Consensus       250 ~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g  318 (359)
                      -.+.+|+|||.-+.  ..-..+++.+||.|+.+ ..++++||++... .-|+-.|..   .||+.+|+.+.+..+
T Consensus       588 l~G~~~v~TG~l~~~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~-gsKl~KA~~lgI~Ii~E~~f~~~l~~~  661 (667)
T 1dgs_A          588 LSGLTFVLTGELSRPREEVKALLGRLGAKVTDSVSRKTSYLVVGENP-GSKLEKARALGVAVLTEEEFWRFLKEK  661 (667)
T ss_dssp             ---------------------------------------------------------------------------
T ss_pred             cCCCEEEEeCCCCCCHHHHHHHHHHcCCEEcCcccCCeeEEEECCCC-ChHHHHHHHCCCeEEeHHHHHHHHhcC
Confidence            46678999998654  22246789999999998 6789999998643 356666654   999999999888765

>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}

Probab=83.26  E-value=2.5  Score=38.22  Aligned_cols=79  Identities=10%  Similarity=-0.022  Sum_probs=50.9

Q ss_pred             CCCceEEEEccc-Ccc-hHHHHHHHhcCcEEecCCC--------------CeeEEEeCC-CCCcHHHHhhcc-cccCHHH
Q 048173          249 NGKCFRITLMNI-ADD-SKKVHLTKNLRGAVTSDGI--------------TSTHVVAGK-VRKTLNFFTALS-WIVSPSW  310 (359)
Q Consensus       249 ~~~~prI~fSgl-~~e-~kk~klik~LGG~V~~d~~--------------~~THLVa~~-~~RT~KfL~AIa-wIVsp~W  310 (359)
                      --++.+|.+|+- .+. .....+|+..||+|+....              .-..||+.. ...+.+-+..-. .|++++|
T Consensus       122 LF~G~~f~it~~~~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~~~~~~ivis~~~d~~~~~~~~~~~~~v~s~E~  201 (219)
T 3sqd_A          122 LFKAKYFYITPGICPSLSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFARGIDVHNAEF  201 (219)
T ss_dssp             TTTTEEEEECTTCSSCHHHHHHHHHHTTCEEESSCCCHHHHHHHHHCTTSCEEEEEECGGGGGGGHHHHHTTCCCEETHH
T ss_pred             ccCCcEEEEeCCCCCCHHHHHHHHHHCCCEEECCCCchHHhhhhhcccCCCCEEEEecccHHHHHHHHHHCCCcEEeHHH
Confidence            345567888764 333 3446889999999988622              224455442 333333332223 9999999


Q ss_pred             HHHHHhCCCCCCCCccee
Q 048173          311 LKESFGEGRFVDESFYML  328 (359)
Q Consensus       311 L~eS~k~g~flDEe~Y~L  328 (359)
                      |.+|.-..++ |-+.|.|
T Consensus       202 il~~Il~q~l-d~~~~~~  218 (219)
T 3sqd_A          202 VLTGVLTQTL-DYESYKF  218 (219)
T ss_dssp             HHHHHHHTCC-CTTTSBC
T ss_pred             HHHHHHheee-cchhccc
Confidence            9999996665 7777765

>4b5o_A Alpha-tubulin N-acetyltransferase; microtubules, cilium, intraflagellar transport; HET: ACO; 1.05A {Homo sapiens} PDB: 4b5p_A*

Probab=82.53  E-value=1.6  Score=39.94  Aligned_cols=48  Identities=15%  Similarity=0.198  Sum_probs=32.0

Q ss_pred             CCcEEEEE-----EeeecCCCCceee-----eeEEEeccCccccChHHHHHHHHHHHH
Q 048173           62 LGKVVAAV-----IYQIVPADTQYAE-----VPLAAVSSIYQHKGVGRLLYLKLRKRL  109 (359)
Q Consensus        62 ~g~IVgvi-----~l~i~~~d~~~a~-----I~~~AV~~~~QgkGIG~~Lv~~l~~~l  109 (359)
                      .+.|+|..     .|++....+...+     |=-|+||+++||+|+|+.|++..++.-
T Consensus        94 ~~~v~G~LKvG~K~Lfl~d~~g~~~e~~~lCvLDFYVhEs~QR~G~Gk~LF~~ML~~e  151 (200)
T 4b5o_A           94 KGAIIGFIKVGYKKLFVLDDREAHNEVEPLCILDFYIHESVQRHGHGRELFQYMLQKE  151 (200)
T ss_dssp             ---EEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSHHHHHHHHHHHHH
T ss_pred             CceEEEEEEEeeeeeEEECCCCCEEEeecceEEEEEechhhhhcCcHHHHHHHHHHHc
Confidence            45677766     2344444444444     456999999999999999999876543

>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2

Probab=81.03  E-value=1.7  Score=44.64  Aligned_cols=83  Identities=13%  Similarity=0.255  Sum_probs=61.2

Q ss_pred             cCCCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC-cEEEEEecc-----ccHH
Q 048173           59 FLNLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI-RTIFCWDDK-----ESSF  127 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI-~~I~l~a~~-----~A~~  127 (359)
                      ...++++||-|......=     -...++|-+++||...|+|+++-.|++|+-.+....|| +.|+.-+..     ..-.
T Consensus       216 v~~s~KLVgFIsgiP~~irv~~~~~~~~eINFLCVHKKLRsKRLAPVLIKEITRRvnl~gI~QAvYTaGvvLP~Pvstcr  295 (496)
T 1rxt_A          216 VVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCR  295 (496)
T ss_dssp             CSSSSCEEEEECCEECCCCCSSSCCCCEECCCCEECSSCCCSSSHHHHHHHHHHHHTTTTCCCEEEEESSCCSSBSCCCC
T ss_pred             EccCCeEEEEEeeeEEEEEEcceEEEeeeEEEEEecHhhhhccCcHHHHHHHHHHhhhcceeeeeeecCcccCCCceeee
Confidence            346789999998654333     22579999999999999999999999999999999997 445554433     2445


Q ss_pred             HHhhcc-------cCcEEEEe
Q 048173          128 FFLKQV-------QDFASVAE  141 (359)
Q Consensus       128 Fw~K~~-------~GF~~~~e  141 (359)
                      ||.+-+       .||.....
T Consensus       296 Y~HRsLNpkKL~evGFS~l~~  316 (496)
T 1rxt_A          296 YWHRSLNPRKLIEVKFSHLSR  316 (496)
T ss_dssp             CCCCCSSHHHHHHTTSSCCCT
T ss_pred             eeeeeCCHHHHhhhCCccCCc
Confidence            665433       57875443

>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}

Probab=80.74  E-value=0.92  Score=46.08  Aligned_cols=54  Identities=17%  Similarity=0.354  Sum_probs=39.4

Q ss_pred             CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc----cHHHHhhcccCcEE
Q 048173           78 TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE----SSFFFLKQVQDFAS  138 (359)
Q Consensus        78 ~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~----A~~Fw~K~~~GF~~  138 (359)
                      +..+|+-.|||+|+|||.|+|..|++++++.     .++ .+|....    -.=||+|. +|+-.
T Consensus       377 ~~~~~L~kfaV~~~~~g~g~~d~l~~~i~~~-----~p~-L~Wrsr~~n~~~~Wyf~rs-~G~~~  434 (467)
T 3s6k_A          377 SALIYLDKFAVLDDAQGEGLGRAVWNVMREE-----TPQ-LFWRSRHNNQVNIFYYAES-DGCIK  434 (467)
T ss_dssp             CSEEEEEEECCCHHHHTTTSHHHHHHHHTTT-----CCS-EEEEECSSCTTHHHHHHHC-SEEEE
T ss_pred             CCCeEEEEEEEchhhhcCCHHHHHHHHHHHh-----CCc-eEEEeCCCCCccceEEeee-eEEEE
Confidence            5799999999999999999999999998865     455 5555442    22345544 45443

>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}

Probab=80.41  E-value=0.34  Score=51.49  Aligned_cols=66  Identities=12%  Similarity=0.078  Sum_probs=0.0

Q ss_pred             CCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHh
Q 048173          250 GKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFG  316 (359)
Q Consensus       250 ~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k  316 (359)
                      -.+.+|+|||.-+.   ..-..+|+.+||.|+.+ ..++++||++... .-|+-.|..   .||+.+|+.+.+.
T Consensus       598 l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~-gsKl~KA~~lgI~Ii~E~~f~~~l~  670 (671)
T 2owo_A          598 FAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAA-GSKLAKAQELGIEVIDEAEMLRLLG  670 (671)
T ss_dssp             --------------------------------------------------------------------------
T ss_pred             ccCcEEEEcCCCCCCCHHHHHHHHHHcCCEEeCcccCceeEEEECCCC-ChHHHHHHHCCCcEEcHHHHHHHhc
Confidence            45678999998653   22247789999999998 6789999999643 256656654   9999999887653

>4h6u_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase; HET: ACO; 2.45A {Danio rerio} PDB: 4h6z_A*

Probab=80.22  E-value=3.6  Score=37.66  Aligned_cols=26  Identities=27%  Similarity=0.247  Sum_probs=22.7

Q ss_pred             eeEEEeccCccccChHHHHHHHHHHH
Q 048173           83 VPLAAVSSIYQHKGVGRLLYLKLRKR  108 (359)
Q Consensus        83 I~~~AV~~~~QgkGIG~~Lv~~l~~~  108 (359)
                      |=-|+||++.||+|+|+.|++..++.
T Consensus       119 vLDFYVhEs~QR~G~Gk~LF~~ML~~  144 (200)
T 4h6u_A          119 VLAFYVTETLQRHGYGSELFDFMLKH  144 (200)
T ss_dssp             EEEEEECGGGTTSSHHHHHHHHHHHH
T ss_pred             eeeeeeehhhcccCcHHHHHHHHHHH
Confidence            55789999999999999999887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	359
d1kzyc1	153	c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens)	2e-08
d1t15a1	109	c.15.1.3 (A:1649-1757) Breast cancer associated pr	2e-06
d1qsra_	162	d.108.1.1 (A:) Catalytic domain of GCN5 histone ac	2e-05
d1wf6a_	132	c.15.1.5 (A:) DNA topoisomerase II binding protein	0.004

>d1kzyc1 c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 153

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: 53BP1
domain: 53BP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 285 THVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYML 328
             ++A +  +T  +F  L+     VS  W+ +S    +  +   Y+L
Sbjct: 89  CLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLL 135

>d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 10/82 (12%)

Query: 262 DDSKKVHLTKNLRGAVTSDGITS--THVVA-----GKVRKTLNFFTALSW---IVSPSWL 311
           ++   V+          ++ IT   THVV          +TL +F  ++    +VS  W+
Sbjct: 12  EEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWV 71

Query: 312 KESFGEGRFVDESFYMLNDDGY 333
            +S  E + ++E  + +  D  
Sbjct: 72  TQSIKERKMLNEHDFEVRGDVV 93

>d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Tetrahymena thermophila [TaxId: 5911]

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 63  GKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD 122
            KV+  + ++      ++AEV   AV++  Q +G G  L  K +  +Q   I  +  + D
Sbjct: 56  QKVIGGICFRQYK-PQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYAD 114

Query: 123 KESSFFFLKQVQDFASVAEVDTEGRAGRLP 152
             +  +F K  Q F     +  E   G + 
Sbjct: 115 NFAIGYFKK--QGFTKEHRMPQEKWKGYIK 142

>d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 132

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA topoisomerase II binding protein 1, TopBP1
domain: DNA topoisomerase II binding protein 1, TopBP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.004
 Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 9/86 (10%)

Query: 253 FRITLMNIADDSKKVHLTKNLR--GAVTSDGITS--THVVAGKVRKTLNFFTALS----W 304
            RI L   +       L + +   G V  + +    THV+ G     L  F   S     
Sbjct: 44  CRIYLCGFSGRKLD-KLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPH 102

Query: 305 IVSPSWLKESFGEGRFVDESFYMLND 330
           +V   WL E F +G  + E  Y+ + 
Sbjct: 103 VVGAKWLLECFSKGYMLSEEPYIHSG 128

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	359
d1z4ra1	162	Catalytic domain of GCN5 histone acetyltransferase	99.8
d1qsra_	162	Catalytic domain of GCN5 histone acetyltransferase	99.78
d1ygha_	164	Catalytic domain of GCN5 histone acetyltransferase	99.69
d1t15a1	109	Breast cancer associated protein, BRCA1 {Human (Ho	99.66
d2jdca1	145	Probable acetyltransferase YitI {Bacillus lichenif	99.64
d1y9wa1	140	Probable acetyltransferase BC2806 {Bacillus cereus	99.56
d1q2ya_	140	Probable acetyltransferase YjcF {Bacillus subtilis	99.55
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	99.54
d1xeba_	149	Hypothetical protein PA0115 {Pseudomonas aeruginos	99.53
d1n71a_	180	Aminoglycoside 6'-N-acetyltransferase {Enterococcu	99.52
d2fiwa1	156	Probable N-acetyltransferase RPA1999 {Rhodopseudom	99.49
d1i12a_	157	Glucosamine-phosphate N-acetyltransferase GNA1 {Ba	99.47
d1ghea_	170	Tabtoxin resistance protein {Pseudomonas syringae	99.45
d2atra1	137	Probable acetyltransferase SP0256 {Streptococcus p	99.43
d1cjwa_	166	Serotonin N-acetyltranferase {Sheep (Ovis aries) [	99.42
d1wf6a_	132	DNA topoisomerase II binding protein 1, TopBP1 {Hu	99.41
d1mk4a_	157	Hypothetical protein YqiY {Bacillus subtilis [TaxI	99.4
d1y7ra1	133	Hypothetical protein SA2161 {Staphylococcus aureus	99.39
d1y9ka1	152	IAA acetyltransferase {Bacillus cereus [TaxId: 139	99.38
d1s3za_	147	Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal	99.37
d1u6ma_	189	Putative acetyltransferase EF0945 {Enterococcus fa	99.36
d1yx0a1	151	Hypothetical protein YsnE {Bacillus subtilis [TaxI	99.36
d2fiaa1	157	Probable acetyltransferase EF1919 {Enterococcus fa	99.35
d1yvka1	152	Hypothetical protein YvbK (BSu33890) {Bacillus sub	99.35
d2gana1	182	Hypothetical protein PH0736 {Pyrococcus horikoshii	99.35
d1ufha_	155	Putative acetyltransferase YycN {Bacillus subtilis	99.35
d1vkca_	149	Putative acetyltransferase PF0028 {Pyrococcus furi	99.35
d2fl4a1	146	Probable spermine/spermidine acetyltransferase EF1	99.33
d1z4ea1	150	Transcriptional regulator BH1968 {Bacillus halodur	99.31
d1wwza1	157	Hypothetical protein PH1933 {Pyrococcus horikoshii	99.3
d1tiqa_	173	Protease synthase and sporulation negative regulat	99.28
d2fe7a1	156	Probable N-acetyltransferase PA0478 {Pseudomonas a	99.28
d1kzyc1	153	53BP1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1cdza_	96	DNA-repair protein XRCC1 {Human (Homo sapiens) [Ta	99.26
d1bo4a_	137	Aminoglycoside 3-N-acetyltransferase {Serratia mar	99.25
d2cy2a1	174	Probable acetyltransferase TTHA1209 {Thermus therm	99.23
d1qsma_	150	Histone acetyltransferase HPA2 {Baker's yeast (Sac	99.23
d2ae6a1	161	Putative acetyltransferase EF0244 {Enterococcus fa	99.21
d2i6ca1	160	Putative acetyltransferase PA4794 {Pseudomonas aer	99.2
d1yr0a1	163	Phosphinothricin acetyltransferase {Agrobacterium	99.2
d2b5ga1	167	Diamine acetyltransferase 1 {Human (Homo sapiens)	99.2
d1vhsa_	165	Putative phosphinothricin acetyltransferase YwnH {	99.2
d1yvoa1	169	Hypothetical protein PA4866 {Pseudomonas aeruginos	99.18
d2euia1	153	Probable acetyltransferase PA4026 {Pseudomonas aer	99.18
d2beia1	167	Diamine acetyltransferase 2 {Human (Homo sapiens)	99.1
d1p0ha_	308	Mycothiol synthase MshD {Mycobacterium tuberculosi	99.06
d2ge3a1	164	Probable acetyltransferase Atu2290 {Agrobacterium	99.0
d1m4ia_	181	Aminoglycoside 2'-N-acetyltransferase {Mycobacteri	99.0
d1r57a_	102	Hypothetical protein SA2309 {Staphylococcus aureus	98.96
d2aj6a1	118	Hypothetical protein MW0638 {Staphylococcus aureus	98.95
d1t15a2	102	Breast cancer associated protein, BRCA1 {Human (Ho	98.88
d1sqha_	297	Hypothetical protein cg14615-pa {Fruit fly (Drosop	98.79
d1nsla_	180	Probable acetyltransferase YdaF {Bacillus subtilis	98.77
d2hv2a2	285	Hypothetical protein EF1021 {Enterococcus faecalis	98.77
d2i00a2	291	Putative acetyltransferase EF2353 {Enterococcus fa	98.75
d1yrea1	183	Hypothetical protein PA3270 {Pseudomonas aeruginos	98.7
d2ozga2	283	Putative acetyltransferase Ava4977 {Anabaena varia	98.7
d2fcka1	178	Putative ribosomal-protein-serine acetyltransferas	98.69
d1s7ka1	174	L7/L12-Ribosomal-protein-serine acetyltransferase	98.61
d1in1a_	88	DNA ligase III alpha {Human (Homo sapiens) [TaxId:	98.34
d1yk3a1	198	Hypothetical protein Rv1347c/MT1389 {Mycobacterium	98.31
d2fsra1	164	Probable acetyltranferase Atu2435 {Agrobacterium t	97.94
d1p0ha_	308	Mycothiol synthase MshD {Mycobacterium tuberculosi	97.92
d1ro5a_	197	Autoinducer synthesis protein LasI {Pseudomonas ae	97.84
d1xmta_	95	Hypothetical protein AT1g77540 {Thale cress (Arabi	97.37
d1l7ba_	92	NAD+-dependent DNA ligase, domain 4 {Thermus therm	97.31
d1kzfa_	210	Acyl-homoserinelactone synthase EsaI {Pantoea stew	96.83
d1iica1	185	N-myristoyl transferase, NMT {Baker's yeast (Sacch	95.73
d1rxta1	141	N-myristoyl transferase, NMT {Human (Homo sapiens)	95.19
d1iyka1	165	N-myristoyl transferase, NMT {Yeast (Candida albic	94.55
d1kzyc2	106	53BP1 {Human (Homo sapiens) [TaxId: 9606]}	94.49
d1l0ba2	97	Breast cancer associated protein, BRCA1 {Rat (Ratt	90.84
d1lrza3	182	Methicillin resistance protein FemA {Staphylococcu	88.45
d1boba_	315	Histone acetyltransferase HAT1 {Baker's yeast (Sac	84.4

>d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.2e-20  Score=158.93  Aligned_cols=129  Identities=21%  Similarity=0.305  Sum_probs=105.6

Q ss_pred             hhhhhhcccccccCccCCcchhhhccCCccchhhhhhccCccccccccccceeeccCCCCcEEEEEEeeecCCCCceeee
Q 048173            4 QIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEV   83 (359)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~IVgvi~l~i~~~d~~~a~I   83 (359)
                      ++|.++||.|.     +.++++++.+....+            ++     +     .++|+|||++.++..+ +.++++|
T Consensus        29 ~iF~~~lp~m~-----~~yi~r~~~d~~~~~------------~v-----~-----~~~~~iIG~i~~~~~~-~~~~aeI   80 (162)
T d1z4ra1          29 NVFSHQLPRMP-----KEYIARLVFDPKHKT------------LA-----L-----IKDGRVIGGICFRMFP-TQGFTEI   80 (162)
T ss_dssp             HHHHHHCTTSC-----HHHHHHHHTCTTCEE------------EE-----E-----EETTEEEEEEEEEEET-TTTEEEE
T ss_pred             HHHHHhCCCCc-----HHHHHHHhcCCCceE------------EE-----E-----EECCEEEEEEEEEEEC-CCCEEEE
Confidence            57888999984     568888887776655            43     2     2689999999988765 4578999


Q ss_pred             eEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEEeecc---cCcccCcchhhhhhhc
Q 048173           84 PLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDT---EGRAGRLPLRQKFRKS  160 (359)
Q Consensus        84 ~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~~---~g~~~~~~~~~~m~K~  160 (359)
                      ..+||+|+|||+|+|+.|++.+++.|++.|++++++.++..|.+||+|+  ||++....+.   .|.|+.+         
T Consensus        81 ~~laV~~~~qgkGiG~~Lm~~l~~~~~~~g~~~i~~~~~~~A~~fY~k~--GF~~~~~~~~~~~~~~ikdy---------  149 (162)
T d1z4ra1          81 VFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQ--GFSKDIKVPKSRYLGYIKDY---------  149 (162)
T ss_dssp             EEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHT--TEESCCCSCHHHHTTTSCCC---------
T ss_pred             EEEEEChhhhhhhHHHHHHHHHHHHHHHCCCcEEEEecCcchHHHHHhC--CCeEeccCchhHhcCCccCC---------
Confidence            9999999999999999999999999999999999999999999999999  9976543333   3444443         


Q ss_pred             CCCCcEEEeccc
Q 048173          161 TEPERVVIDGCS  172 (359)
Q Consensus       161 l~~~~~m~~~l~  172 (359)
                       ..+|+|.|+|.
T Consensus       150 -~~~~lm~~~~~  160 (162)
T d1z4ra1         150 -EGATLMECELN  160 (162)
T ss_dssp             -TTCEEEEEECC
T ss_pred             -CCeEEEEEecC
Confidence             24499999986

>d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Tetrahymena thermophila [TaxId: 5911]

Probab=99.78  E-value=1.5e-19  Score=157.27  Aligned_cols=135  Identities=22%  Similarity=0.311  Sum_probs=104.4

Q ss_pred             cchhhhhhcccccccCccCCcchhhhccCCccchhhhhhccCccccccccccceeeccCCCCcEEEEEEeeecCCCCcee
Q 048173            2 VLQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYA   81 (359)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~IVgvi~l~i~~~d~~~a   81 (359)
                      +.+++.++||.|     ++.++++.+-+....+            ++         .+..+|+|||++.+.+.+ +++++
T Consensus        21 l~~if~~~lp~~-----~~~y~~r~i~d~~~~~------------~~---------v~~~~g~iVG~~~~~~~~-~~~~~   73 (162)
T d1qsra_          21 LKNIFSRQLPKM-----PKEYIVKLVFDRHHES------------MV---------ILKNKQKVIGGICFRQYK-PQRFA   73 (162)
T ss_dssp             HHHHHHHHCTTS-----CHHHHHHHHTSTTEEE------------EE---------EEETTTEEEEEEEEEEET-TTTEE
T ss_pred             HHHHHHHHCCCC-----CHHHHHHHhhCcCCcE------------EE---------EEEECCEEEEEEEEEEEC-CCCEE
Confidence            357888899987     4566777776655443            22         234789999999987765 45789


Q ss_pred             eeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEEeecccCcccCcchhhhhhhcC
Q 048173           82 EVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKST  161 (359)
Q Consensus        82 ~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~~~g~~~~~~~~~~m~K~l  161 (359)
                      +|..+||+|+|||+|||++|+..+++.|++.|++.|++.++..|.+||+|+  ||+..+..+..-...       ..|..
T Consensus        74 ei~~laV~p~~rg~GiG~~Ll~~l~~~a~~~g~~~i~l~~~~~a~~fY~k~--GF~~~~~~~~~~~~~-------~~k~y  144 (162)
T d1qsra_          74 EVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQ--GFTKEHRMPQEKWKG-------YIKDY  144 (162)
T ss_dssp             EEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHT--TCBSSCSSCHHHHBT-------TBCCC
T ss_pred             EEEEEEEcHHHccCchHHHHHHHHHHHHHhCCCeEEEEecCCccHHHHHhC--CCeeeccCChhHhcC-------cccCC
Confidence            999999999999999999999999999999999999999999999999999  998655443311111       22222


Q ss_pred             CCCcEEEeccc
Q 048173          162 EPERVVIDGCS  172 (359)
Q Consensus       162 ~~~~~m~~~l~  172 (359)
                      ..+++|.++|.
T Consensus       145 ~~~~~M~~~l~  155 (162)
T d1qsra_         145 DGGTLMECYIH  155 (162)
T ss_dssp             TTSEEEEEECC
T ss_pred             CCeEEEEEecC
Confidence            23399999996

>d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=3.2e-17  Score=142.31  Aligned_cols=135  Identities=19%  Similarity=0.259  Sum_probs=101.7

Q ss_pred             chhhhhhcccccccCccCCcchhhhccCCccchhhhhhccCccccccccccceeeccCCCCcEEEEEEeeecCCCCceee
Q 048173            3 LQIYSRELLSMNYAGKRSIFPEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAE   82 (359)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~IVgvi~l~i~~~d~~~a~   82 (359)
                      .++|+++||.|     .+.+++++.-|....+            ++         .+.++|+|||++.+++.+ +.+.++
T Consensus        23 ~~if~~~lp~~-----~~~~i~r~~~d~~~~~------------~~---------v~~~~~~iVG~~~~~~~~-~~~~ae   75 (164)
T d1ygha_          23 KNIFQKQLPKM-----PKEYIARLVYDRSHLS------------MA---------VIRKPLTVVGGITYRPFD-KREFAE   75 (164)
T ss_dssp             HHHHHHHCTTS-----CHHHHHHHHHCTTCEE------------EE---------EEETTTEEEEEEEEEEEG-GGTEEE
T ss_pred             HHHHHHHcCCc-----cHHHHHHHHhccCCce------------EE---------EEEeCCeEEEEEEEEecC-CCCEEE
Confidence            46788999988     3568888887765444            32         234799999999987664 456899


Q ss_pred             eeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEeccccHHHHhhcccCcEEEEeecccCcccCcchhhhhhhcC
Q 048173           83 VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDKESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQKFRKST  161 (359)
Q Consensus        83 I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~~~g~~~~~~~~~~m~K~l  161 (359)
                      |..+||+|+|||+|+|+.|++++++.|++.| +..++..++..|.+||+|+  ||+.....+...       .....|.-
T Consensus        76 I~~laV~p~~rg~GiG~~L~~~l~~~~k~~~~~~~~~~~~n~~A~~fY~k~--GF~~~~~~~~~~-------~~gy~kd~  146 (164)
T d1ygha_          76 IVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQ--GFTKEITLDKSI-------WMGYIKDY  146 (164)
T ss_dssp             EEEEEECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHT--TCBSSCCSCHHH-------HBTTBCCT
T ss_pred             EEEEEECchhccCHHHHHHHHHHHHHHHhhCceEEEEEecCHHHHHHHHhc--CCEEecccchhh-------hcCcccCC
Confidence            9999999999999999999999999999887 5555666677899999999  998665544321       11122322


Q ss_pred             CCCcEEEecccc
Q 048173          162 EPERVVIDGCSR  173 (359)
Q Consensus       162 ~~~~~m~~~l~~  173 (359)
                      +.+.+|.|.|..
T Consensus       147 e~~ilM~~~l~p  158 (164)
T d1ygha_         147 EGGTLMQCSMLP  158 (164)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCeEEEEEEcCC
Confidence            244999999973

>d1t15a1 c.15.1.3 (A:1649-1757) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=4.2e-17  Score=132.46  Aligned_cols=81  Identities=20%  Similarity=0.397  Sum_probs=71.4

Q ss_pred             eEEEEcccCcchHH--HHHHHhcCcEEecC-CCCeeEEEeCC-----CCCcHHHHhhcc---cccCHHHHHHHHhCCCCC
Q 048173          253 FRITLMNIADDSKK--VHLTKNLRGAVTSD-GITSTHVVAGK-----VRKTLNFFTALS---WIVSPSWLKESFGEGRFV  321 (359)
Q Consensus       253 prI~fSgl~~e~kk--~klik~LGG~V~~d-~~~~THLVa~~-----~~RT~KfL~AIa---wIVsp~WL~eS~k~g~fl  321 (359)
                      +.|++||+.++++.  .++++.+||.+..+ .++|||||+..     ..||+|++.|++   |||+|+||.+|+++|+++
T Consensus         2 ~~i~~SGl~~~e~~~l~~~i~~~Gg~~~~~~~~~~THlI~~~~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~~~~l   81 (109)
T d1t15a1           2 MSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKML   81 (109)
T ss_dssp             CEEEEESCCHHHHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHHHHTTSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHHcCCEEEeEecCCccEEEEecCcchhhHhhHHHHHHHHCCCccccHHHHHHHHHhCCcC
Confidence            57899999986443  48899999999988 88999999964     579999999988   999999999999999999


Q ss_pred             CCCcceecCccc
Q 048173          322 DESFYMLNDDGY  333 (359)
Q Consensus       322 DEe~Y~L~D~e~  333 (359)
                      ||++|++..+..
T Consensus        82 ~e~~y~v~~~~~   93 (109)
T d1t15a1          82 NEHDFEVRGDVV   93 (109)
T ss_dssp             CGGGGBCCEETT
T ss_pred             CchheEEecccC
Confidence            999999886544

>d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YitI
species: Bacillus licheniformis [TaxId: 1402]

Probab=99.64  E-value=4.7e-16  Score=131.70  Aligned_cols=96  Identities=16%  Similarity=0.193  Sum_probs=82.2

Q ss_pred             CCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G  135 (359)
                      .++++|||++.++..++    +...++|+.++|+|+|||+|||+.|++++++.|++.|++.|+++++..|.+||+|+  |
T Consensus        44 ~~~~~iVg~~~~~~~~~~~~~~~~~~~l~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~A~~fY~k~--G  121 (145)
T d2jdca1          44 YYGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKL--G  121 (145)
T ss_dssp             EETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHT--T
T ss_pred             EeCCEEEEEEEEEeccccccCCCCeEEEEEEEEeHHHhhhhHHHHHHHHHHHHHHHcCCCEEEEeccchHHHHHHHC--C
Confidence            37899999999887664    44668899999999999999999999999999999999999999999999999999  9


Q ss_pred             cEEEEeecccCcc-cCcchhhhhhhcC
Q 048173          136 FASVAEVDTEGRA-GRLPLRQKFRKST  161 (359)
Q Consensus       136 F~~~~e~~~~g~~-~~~~~~~~m~K~l  161 (359)
                      |+.+++.=....+ .|+.    |.|.|
T Consensus       122 F~~~g~~f~~~~ig~h~~----M~k~l  144 (145)
T d2jdca1         122 FSEQGEVFDTPPVGPHIL----MYKRI  144 (145)
T ss_dssp             CEEEEEEEECTTSCEEEE----EEEEC
T ss_pred             CEEeCcEeccCCCcccEE----EEEEC
Confidence            9999865333333 5666    77765

>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase BC2806
species: Bacillus cereus [TaxId: 1396]

Probab=99.56  E-value=6e-15  Score=122.30  Aligned_cols=81  Identities=17%  Similarity=0.172  Sum_probs=71.7

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec-cccHHHHhhcccCcE
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD-KESSFFFLKQVQDFA  137 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~-~~A~~Fw~K~~~GF~  137 (359)
                      ..++|+|||.+.+...+   +.++|..++|+|+|||+|+|+.|++++++.|++.|+.+|.+.+. ..|..||+|+  ||+
T Consensus        45 ~~~~~~ivG~~~~~~~~---~~~~i~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~A~~fY~k~--GF~  119 (140)
T d1y9wa1          45 KNEEGKIFGGVTGTMYF---YHLHIDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKH--GYR  119 (140)
T ss_dssp             ECTTCCEEEEEEEEEET---TEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHT--TCE
T ss_pred             EeCCCcEEEEEEEEEec---CeeEEEEEEECccccCCCcHHHHHHHHHHHHHhccceEEEEeechhhHHHHHHhC--CCE
Confidence            45789999988865543   45889999999999999999999999999999999999999986 4699999999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      .+++.+.
T Consensus       120 ~~g~~~~  126 (140)
T d1y9wa1         120 EYGVVED  126 (140)
T ss_dssp             EEEEESS
T ss_pred             EEEEECC
Confidence            9998655

>d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YjcF
species: Bacillus subtilis [TaxId: 1423]

Probab=99.55  E-value=3.9e-15  Score=125.42  Aligned_cols=88  Identities=17%  Similarity=0.226  Sum_probs=78.0

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      .+++++||++++...+   .+++|..+||+|+|||+|+|+.|++++++.+++.|+++|++.++..|.+||+|+  ||+.+
T Consensus        48 ~~~~~~vg~~~~~~~~---~~~~i~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~a~~fY~k~--GF~~~  122 (140)
T d1q2ya_          48 YDGEKPVGAGRWRMKD---GYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGASGFILNAQTQAVPFYKKH--GYRVL  122 (140)
T ss_dssp             EETTEEEEEEEEEEET---TEEEEEEEECCGGGTTTTHHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHT--TCEES
T ss_pred             eccccEEEEEeeeccc---ceeeEeeeEEchhhcCCcHHHHHHHHHHHHHHHcCCCceEEeCCHHHHHHHHHC--cCEEc
Confidence            4789999999976543   569999999999999999999999999999999999999999998999999999  99999


Q ss_pred             Eeecc-cCcccCcc
Q 048173          140 AEVDT-EGRAGRLP  152 (359)
Q Consensus       140 ~e~~~-~g~~~~~~  152 (359)
                      ++..- ...|.|+.
T Consensus       123 ~~~~~~e~gI~h~~  136 (140)
T d1q2ya_         123 SEKEFLDAGIPHLQ  136 (140)
T ss_dssp             CSCCEESSSSEEEE
T ss_pred             CCeeeeeCCCceEE
Confidence            87543 55577776

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.54  E-value=6.8e-15  Score=122.77  Aligned_cols=81  Identities=10%  Similarity=0.103  Sum_probs=72.2

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-ccHHHHhhcccCcE
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-ESSFFFLKQVQDFA  137 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~K~~~GF~  137 (359)
                      ..++|+|||++.....+   ..++|..++|+|+|||+|||+.|++++++.+++.|+.+|.+.+.. .|..||+|+  ||+
T Consensus        42 ~d~~g~ivG~~~~~~~~---~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~fY~k~--GF~  116 (137)
T d2g3aa1          42 RNDDNSVTGGLVGHTAR---GWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERY--GFT  116 (137)
T ss_dssp             ECTTCCEEEEEEEEEET---TEEEEEEEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHH--TCE
T ss_pred             EeCCCCEEEEEEEEEeC---CeEEEEEEEEChhhcCCChHHHHHHHHHHHHHHcCCceEEEecccHhhHHHHHhC--CCE
Confidence            44789999998865543   358899999999999999999999999999999999999998875 599999999  999


Q ss_pred             EEEeecc
Q 048173          138 SVAEVDT  144 (359)
Q Consensus       138 ~~~e~~~  144 (359)
                      .+++.+.
T Consensus       117 ~~g~~~~  123 (137)
T d2g3aa1         117 KIGSLGP  123 (137)
T ss_dssp             EEEEECC
T ss_pred             EEEEECC
Confidence            9998776

>d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA0115
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.53  E-value=5e-15  Score=126.71  Aligned_cols=95  Identities=14%  Similarity=0.161  Sum_probs=80.8

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCc-EEEEEeccccHHHHhhcccCcEE
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIR-TIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~-~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      .++|++||+++++..+.....++|..+||+|+|||+|+|+.|++++++.+++.|.. .|.|.+...+.+||+|+  ||+.
T Consensus        54 ~~~~~~vg~~rl~~~~~~~~~~~i~rvaV~~~~Rg~GiG~~L~~~~l~~~~~~~~~~~i~l~A~~~a~~FY~k~--GF~~  131 (149)
T d1xeba_          54 WRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRY--GFVA  131 (149)
T ss_dssp             EETTEEEEEEEEECSTTTTTCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTT--TEEE
T ss_pred             EeCCeEEEEEEEeeccccCCcEEEEEEEEehhhhccChhHHHHHHHHHHHHHhCCCCEEEEeChHHHHHHHHHC--CCEE
Confidence            37899999999876555455688999999999999999999999999999999765 59999998899999999  9999


Q ss_pred             EEeecccCcccCcchhhhhhhc
Q 048173          139 VAEVDTEGRAGRLPLRQKFRKS  160 (359)
Q Consensus       139 ~~e~~~~g~~~~~~~~~~m~K~  160 (359)
                      +++.-.+..|.|..    |+|+
T Consensus       132 ~g~~f~e~GipHv~----M~k~  149 (149)
T d1xeba_         132 VTEVYLEDDIPHIG----MRRA  149 (149)
T ss_dssp             CSCCEEETTEEEEE----EEEC
T ss_pred             CCCccccCCCccce----EECC
Confidence            98654433478887    7764

>d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 6'-N-acetyltransferase
species: Enterococcus faecium [TaxId: 1352]

Probab=99.52  E-value=2.6e-14  Score=123.51  Aligned_cols=85  Identities=20%  Similarity=0.142  Sum_probs=73.3

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec----------------
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD----------------  122 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~----------------  122 (359)
                      +.++|++||++.+.... +...++|..++|+|+|||+|||+.|++++++.|++.|+++|.+.++                
T Consensus        50 a~~~~~iig~~~~~~~~-~~~~~~I~~i~V~p~~rg~GiG~~Ll~~~~~~a~~~G~~~i~L~t~~~~~~~~~~~~~~~~~  128 (180)
T d1n71a_          50 AVDQDELVGFIGAIPQY-GITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEH  128 (180)
T ss_dssp             EEETTEEEEEEEEEEEE-TTTEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSS
T ss_pred             EEECCeEEEEEEEEEec-CCCEEEEEEEEEchHHhccHHHHHHHHHHHHHHHHCCCCEEEEEecCcccccchhhhhcccc
Confidence            44889999987765443 4467899999999999999999999999999999999999999884                


Q ss_pred             ------------cccHHHHhhcccCcEEEEeecc-cC
Q 048173          123 ------------KESSFFFLKQVQDFASVAEVDT-EG  146 (359)
Q Consensus       123 ------------~~A~~Fw~K~~~GF~~~~e~~~-~g  146 (359)
                                  ..|..||+|+  ||.+++..+. .|
T Consensus       129 ~~~~~~~~~~~n~~a~~fY~k~--Gf~~~g~~~~~~g  163 (180)
T d1n71a_         129 TFDKVASIQNLREHPYEFYEKL--GYKIVGVLPNANG  163 (180)
T ss_dssp             HHHHHHTCCBSSCCTHHHHHHT--TCEEEEEETTTTS
T ss_pred             cccccchhccccHHHHHHHHHC--CCEEEeeecCCCC
Confidence                        3489999999  9999998776 45

>d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable N-acetyltransferase RPA1999
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=99.49  E-value=2.5e-14  Score=120.26  Aligned_cols=75  Identities=17%  Similarity=0.143  Sum_probs=67.6

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      +..+|+|||.+.+  .+.    ++|..++|+|+|||+|||++|++++++.|++.|+..+.+.++..|.+||+|+  ||+.
T Consensus        63 a~~~~~ivG~~~~--~~~----~~i~~l~V~p~~~g~GiG~~Ll~~~~~~a~~~g~~~l~~~~~~~A~~fY~k~--GF~~  134 (156)
T d2fiwa1          63 ATLQGVPVGFASL--KGP----DHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKR--GYVA  134 (156)
T ss_dssp             EEETTEEEEEEEE--ETT----TEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTT--TCEE
T ss_pred             EEECCEEEEEEee--ccc----hhHHHHhccHHHcCCCHHHHHHHHHHHHHHhcCCCEEEEEeccchhHHHHhC--CCEE
Confidence            4478999998874  233    4699999999999999999999999999999999999999999999999999  9998


Q ss_pred             EEe
Q 048173          139 VAE  141 (359)
Q Consensus       139 ~~e  141 (359)
                      +++
T Consensus       135 ~~~  137 (156)
T d2fiwa1         135 KQR  137 (156)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            875

>d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Glucosamine-phosphate N-acetyltransferase GNA1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.47  E-value=9.6e-14  Score=113.80  Aligned_cols=81  Identities=23%  Similarity=0.143  Sum_probs=72.6

Q ss_pred             cCCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhccc
Q 048173           59 FLNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQ  134 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~  134 (359)
                      ...+|+|||.+.+.+.+.    +...++|..++|+|+|||+|||+.|++++++.|++.|++.|++.++..+.+||+|+  
T Consensus        67 ~~~~~~ivG~~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~L~~~~~~~a~~~g~~~i~l~~~~~~~~~Y~k~--  144 (157)
T d1i12a_          67 DKRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKC--  144 (157)
T ss_dssp             ETTTTEEEEEEEEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHT--
T ss_pred             EEECCEEEEEEEEeccccccccCcceeEEEEEEecHhhcCCCchHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHhC--
Confidence            347889999988765544    34778999999999999999999999999999999999999999999999999999  


Q ss_pred             CcEEEEe
Q 048173          135 DFASVAE  141 (359)
Q Consensus       135 GF~~~~e  141 (359)
                      ||+..+.
T Consensus       145 GF~~~g~  151 (157)
T d1i12a_         145 GFSNAGV  151 (157)
T ss_dssp             TCEEEEE
T ss_pred             CCEEeeE
Confidence            9998773

>d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Tabtoxin resistance protein
species: Pseudomonas syringae [TaxId: 317]

Probab=99.45  E-value=2.2e-13  Score=116.16  Aligned_cols=83  Identities=16%  Similarity=0.146  Sum_probs=72.4

Q ss_pred             CCCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc--ccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK--ESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~--~A~~Fw~K~~~G  135 (359)
                      .++|+|||++.+...+.  +..+++|..++|+|+|||+|||+.|++++++.+++.|++.+.+....  .|..||+|+  |
T Consensus        65 ~~~~~ivG~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~l~L~~~~n~~a~~fY~k~--G  142 (170)
T d1ghea_          65 AEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSAL--A  142 (170)
T ss_dssp             EETTEEEEEEEEEECCSTTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHT--T
T ss_pred             EECCEEEEEEEEeeccccCCCcEEEEEEEEEcchhhcCCcHHHHHHHHHHHHHHcCCceEeeecccchHHHHHHHHC--C
Confidence            47899999988776654  33679999999999999999999999999999999999999886554  489999999  9


Q ss_pred             cEEEEeecc
Q 048173          136 FASVAEVDT  144 (359)
Q Consensus       136 F~~~~e~~~  144 (359)
                      |+.+++.+.
T Consensus       143 F~~~g~~~~  151 (170)
T d1ghea_         143 YTRVGELPG  151 (170)
T ss_dssp             CEEEEEEEE
T ss_pred             CEEEEEeCC
Confidence            999998554

>d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase SP0256
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.43  E-value=1.9e-14  Score=118.36  Aligned_cols=84  Identities=17%  Similarity=0.114  Sum_probs=73.6

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS  138 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~  138 (359)
                      +.++|+|||.+.++..+.  .+++|..++|+|+|||+|||++|++++++.+++.|+..+.+.++..|.+||+|+  ||+.
T Consensus        47 ~~~~~~ivG~~~~~~~~~--~~~~i~~l~V~~~~rg~GiG~~Ll~~~~~~~~~~~~~~i~l~~~~~a~~fY~k~--GF~~  122 (137)
T d2atra1          47 ALDGDAVVGLIRLVGDGF--SSVFVQDLIVLPSYQRQGIGSSLMKEALGNFKEAYQVQLATEETEKNVGFYRSM--GFEI  122 (137)
T ss_dssp             EEETTEEEEEEEEEECSS--SEEEEEEEEECTTSCSSSHHHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHHT--TCCC
T ss_pred             EEECCEEEEEEEEEccCC--ceEEEEEEEEEHHHcCchHHHHHHHHHHHHHHHCCCeEEEEeecHHHHHHHHhC--CCEE
Confidence            347889999988654444  679999999999999999999999999999999999999999988899999999  9998


Q ss_pred             EEeecccC
Q 048173          139 VAEVDTEG  146 (359)
Q Consensus       139 ~~e~~~~g  146 (359)
                      +++.+..|
T Consensus       123 ~~~~~~~~  130 (137)
T d2atra1         123 LSTYDCTG  130 (137)
T ss_dssp             GGGGTCCC
T ss_pred             CccCCccc
Confidence            77655443

>d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Serotonin N-acetyltranferase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.42  E-value=4.5e-13  Score=110.93  Aligned_cols=91  Identities=15%  Similarity=0.210  Sum_probs=75.4

Q ss_pred             CCCCcEEEEEEeeecC-------------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecccc
Q 048173           60 LNLGKVVAAVIYQIVP-------------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKES  125 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~-------------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A  125 (359)
                      ..+|+++|.+......             .+.++++|..++|+|+|||+|||+.|++++.+.+++. |++.|.+.++..|
T Consensus        56 ~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~~~~~~i~l~~~~~a  135 (166)
T d1cjwa_          56 FVEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDAL  135 (166)
T ss_dssp             EETTEEEEEEEEEEECSSSCCGGGGGCCCTTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGG
T ss_pred             EECCceeeeecccccccccchhhhhhcccCCCCEEEEEEEEECHHHccCCHHHHHHHHHHHHHHHhCCCceEEEecCHHH
Confidence            3688999987754332             2447899999999999999999999999998888776 6888999999899


Q ss_pred             HHHHhhcccCcEEEEeecc-cCcccCcc
Q 048173          126 SFFFLKQVQDFASVAEVDT-EGRAGRLP  152 (359)
Q Consensus       126 ~~Fw~K~~~GF~~~~e~~~-~g~~~~~~  152 (359)
                      .+||+|+  ||+.+++.+. .|.++-+.
T Consensus       136 i~fY~k~--GF~~~G~~~~~~g~~~~~~  161 (166)
T d1cjwa_         136 VPFYQRF--GFHPAGPCAIVVGSLTFTE  161 (166)
T ss_dssp             HHHHHTT--TEEEEEECSCCBTTBCCEE
T ss_pred             HHHHHHC--CCEEEcceeeEECCEEEEE
Confidence            9999999  9999998655 66555554

>d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA topoisomerase II binding protein 1, TopBP1
domain: DNA topoisomerase II binding protein 1, TopBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.6e-13  Score=114.38  Aligned_cols=84  Identities=21%  Similarity=0.321  Sum_probs=71.2

Q ss_pred             CCceEEEEcccCcchH--HHHHHHhcCcEEecC-CCCeeEEEeCCCC-CcHHHHhhcc---cccCHHHHHHHHhCCCCCC
Q 048173          250 GKCFRITLMNIADDSK--KVHLTKNLRGAVTSD-GITSTHVVAGKVR-KTLNFFTALS---WIVSPSWLKESFGEGRFVD  322 (359)
Q Consensus       250 ~~~prI~fSgl~~e~k--k~klik~LGG~V~~d-~~~~THLVa~~~~-RT~KfL~AIa---wIVsp~WL~eS~k~g~flD  322 (359)
                      -...+|.|||+.+..+  ..+++..+||.+... .+.|||||+.... ++.+++.+..   |||+|+||.+|+++++++|
T Consensus        41 f~G~~i~isGf~~~~~~~l~~~i~~~GG~~~~~~~~~vTHvIv~~~~~~~~~~~~~~~~~i~iV~~~Wl~~c~~~~~~l~  120 (132)
T d1wf6a_          41 LDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPHVVGAKWLLECFSKGYMLS  120 (132)
T ss_dssp             TTTCEEEEESCCSHHHHHHHHHHHHTTCEEESSCCSSCCEEEESSCCSHHHHHHHHSCCCCCEEEHHHHHHHHHHSSCCC
T ss_pred             hCCeEEEEeeCCCHHHHHHHHHHHHcCCEEecccCCCceEEEecCCCccHHHHHHHhcCCCCcCCHHHHHHHHHcCCcCC
Confidence            4578999999987533  247889999999887 7889999998754 6677777776   9999999999999999999


Q ss_pred             CCcceecCccc
Q 048173          323 ESFYMLNDDGY  333 (359)
Q Consensus       323 Ee~Y~L~D~e~  333 (359)
                      |++|.+..|+.
T Consensus       121 ~~~Y~~~~P~~  131 (132)
T d1wf6a_         121 EEPYIHSGPSS  131 (132)
T ss_dssp             SGGGBCCCSCC
T ss_pred             HHhCcCCCCCC
Confidence            99999988753

>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YqiY
species: Bacillus subtilis [TaxId: 1423]

Probab=99.40  E-value=5.3e-13  Score=111.27  Aligned_cols=84  Identities=15%  Similarity=0.184  Sum_probs=75.7

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccC
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      +.++|++||.+.+...+.+.+.++|..++|+|+|||+|+|+.|++++++.+++.|+++|.+.+...   |..||+|+  |
T Consensus        47 ~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~v~~~~~~~N~~a~~~y~k~--G  124 (157)
T d1mk4a_          47 TSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKL--G  124 (157)
T ss_dssp             EESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHT--T
T ss_pred             EEECCEEEEEeeeeeeccCCccceeeEEEEEHHHcCCcccchHHHHHHHhhccccceEEEEEeccchHHHHHHHHHC--C
Confidence            448999999888777777778899999999999999999999999999999999999999999885   89999999  9


Q ss_pred             cEEEEeecc
Q 048173          136 FASVAEVDT  144 (359)
Q Consensus       136 F~~~~e~~~  144 (359)
                      |+..++.++
T Consensus       125 F~~~~~~~~  133 (157)
T d1mk4a_         125 FDIEKGTKT  133 (157)
T ss_dssp             CEECCCSEE
T ss_pred             CEEeeeEec
Confidence            998776444

>d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein SA2161
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.39  E-value=2.5e-13  Score=112.21  Aligned_cols=79  Identities=14%  Similarity=0.217  Sum_probs=67.2

Q ss_pred             ccCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEE--EeccccHHHHhhcccC
Q 048173           58 SFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC--WDDKESSFFFLKQVQD  135 (359)
Q Consensus        58 ~~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l--~a~~~A~~Fw~K~~~G  135 (359)
                      .+.++|++||++.+...  ....++|..++|+|+|||+|+|+.|++++++.+++.|++++.+  .++..|.+||+|+  |
T Consensus        43 ~~~~~~~~vG~~~~~~~--~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g~~~~~l~~~a~~~a~~fY~k~--G  118 (133)
T d1y7ra1          43 TLYDKDRLIGMGRVIGD--GGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKF--G  118 (133)
T ss_dssp             EEEETTEEEEEEEEEEC--SSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTT--T
T ss_pred             EEEECCEEEEEEEEEec--cCCEEEEEEEEEeecccchHHHHHHHHHHHHHHHHcCCCEEEEEEcCChHHHHHHHHC--C
Confidence            34578999999986443  3467999999999999999999999999999999999998754  4666799999999  9


Q ss_pred             cEEEE
Q 048173          136 FASVA  140 (359)
Q Consensus       136 F~~~~  140 (359)
                      |+..+
T Consensus       119 F~~~~  123 (133)
T d1y7ra1         119 FMPTE  123 (133)
T ss_dssp             CEECT
T ss_pred             CEEeC
Confidence            98643

>d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: IAA acetyltransferase
species: Bacillus cereus [TaxId: 1396]

Probab=99.38  E-value=1.2e-12  Score=111.21  Aligned_cols=81  Identities=16%  Similarity=0.144  Sum_probs=70.9

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .++|++||++.+..  .+++.++|..++|+|+|||+|+|+.|++.+++.+++.|++.+.+.+..   .|..||+|+  ||
T Consensus        41 ~~~g~ivG~~~~~~--~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~t~~~n~~a~~fY~k~--GF  116 (152)
T d1y9ka1          41 KQGGSVIGVYVLLE--TRPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKC--GF  116 (152)
T ss_dssp             ECSSSEEEEEEEEE--CSTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             EECCEEEEEEEEEE--cCCCEEEEEEEEEcHHHCCCCcchHHHHHHHHHHHHcCCceEEEEeccCCHHHHHHHHHC--CC
Confidence            47899999887543  445779999999999999999999999999999999999999998776   388899999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +..+..+.
T Consensus       117 ~~~~~~~~  124 (152)
T d1y9ka1         117 RIFSIDFD  124 (152)
T ss_dssp             EEEEEETT
T ss_pred             EEEeEEcC
Confidence            99887543

>d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside N-acetyltransferase AAC(6')-IY
species: Salmonella enteritidis [TaxId: 149539]

Probab=99.37  E-value=1.7e-12  Score=105.37  Aligned_cols=82  Identities=15%  Similarity=0.109  Sum_probs=71.5

Q ss_pred             cCCCCcEEEEEEeeecCC------CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHH
Q 048173           59 FLNLGKVVAAVIYQIVPA------DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFF  129 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~------d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw  129 (359)
                      +.++|++||.+.+.+.+.      ..++++|..++|+|+|||+|||+.|++++++.+++.|+++|.+.+...   |..||
T Consensus        50 a~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~~l~V~~~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~fY  129 (147)
T d1s3za_          50 AMADGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVH  129 (147)
T ss_dssp             EEETTEEEEEEEEEEECSCCTTCSSSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHH
T ss_pred             EEECCEEEEEEEEEeecCcccccCCCCeEEEEEEEECHHHcCCcHHHHHHHHHHHHhhhccccceEEEEcCCCHHHHHHH
Confidence            347899999887765543      347899999999999999999999999999999999999999998864   89999


Q ss_pred             hhcccCcEEEEee
Q 048173          130 LKQVQDFASVAEV  142 (359)
Q Consensus       130 ~K~~~GF~~~~e~  142 (359)
                      +|+  ||+.++.+
T Consensus       130 ~k~--GF~~~~~~  140 (147)
T d1s3za_         130 QAL--GFEETERV  140 (147)
T ss_dssp             HHT--TCEEEEEE
T ss_pred             HHC--CCEEECeE
Confidence            999  99887753

>d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase EF0945
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.36  E-value=9e-13  Score=109.94  Aligned_cols=87  Identities=14%  Similarity=0.183  Sum_probs=72.7

Q ss_pred             ccCCCCcEEEEEEeeecCCC-----------------------------CceeeeeEEEeccCccccChHHHHHHHHHHH
Q 048173           58 SFLNLGKVVAAVIYQIVPAD-----------------------------TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKR  108 (359)
Q Consensus        58 ~~~~~g~IVgvi~l~i~~~d-----------------------------~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~  108 (359)
                      .+.++++|+|+.........                             ...++|..++|+|+|||+|+|+.|++++++.
T Consensus        60 v~e~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~  139 (189)
T d1u6ma_          60 VYEHAGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEV  139 (189)
T ss_dssp             EEEETTEEEEEEEEEEGGGTTTSSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHH
T ss_pred             EEEEcCeEEEEEEEeccccccccchhhhhhhhhcccccccccccccccCCCEEEEEEEEECHHHcCCCcCcchhHHHHHH
Confidence            34578899998876432221                             1347899999999999999999999999999


Q ss_pred             HHHcCCcEEEEEeccc---cHHHHhhcccCcEEEEeecccC
Q 048173          109 LQSVGIRTIFCWDDKE---SSFFFLKQVQDFASVAEVDTEG  146 (359)
Q Consensus       109 lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF~~~~e~~~~g  146 (359)
                      |++.|++.+.+.+...   |..||+|+  ||+.+++....|
T Consensus       140 a~~~g~~~~~l~v~~~N~~a~~~Yek~--GF~~~~~~~~~~  178 (189)
T d1u6ma_         140 AKASGKQALGLNVDFDNPGARKLYASK--GFKDVTTMTISG  178 (189)
T ss_dssp             HHTTTCSEEEEEEETTCHHHHHHHHTT--TCEEEEEEEETT
T ss_pred             HHhcCCceeEEEEcCCCHHHHHHHHHC--CCEEEEEEEECC
Confidence            9999999999988764   78999999  999999866644

>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YsnE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.36  E-value=3e-13  Score=115.62  Aligned_cols=80  Identities=9%  Similarity=0.063  Sum_probs=70.2

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec--c---ccHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD--K---ESSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~--~---~A~~Fw~K~~  133 (359)
                      +.++|++||++.+...+.  ..++|..++|+|+|||+|+|++|++.+++.|++.|++.|.+++.  .   .|..||+|+ 
T Consensus        51 a~~~~~~vG~~~~~~~~~--~~~~i~~~~V~p~~Rg~Glg~~Ll~~~~~~A~~~g~~~i~L~t~~~~~n~~A~~lY~k~-  127 (151)
T d1yx0a1          51 AWEGDELAGCGALKELDT--RHGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESF-  127 (151)
T ss_dssp             EECSSSEEEEEEEEEEET--TEEECCCCCCSTTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTT-
T ss_pred             EEECCEEEEEEEEEeccC--ceEEEEeeeeCHHHHhCChhHHHHHHHHHHHHHCCCcEEEEEeccccchHHHHHHHHHc-
Confidence            448999999999876666  45999999999999999999999999999999999999999753  2   389999999 


Q ss_pred             cCcEEEEee
Q 048173          134 QDFASVAEV  142 (359)
Q Consensus       134 ~GF~~~~e~  142 (359)
                       ||+.++..
T Consensus       128 -GF~~~~~~  135 (151)
T d1yx0a1         128 -GFQYCEPF  135 (151)
T ss_dssp             -SEEECCCC
T ss_pred             -CCEECCcc
Confidence             99987643

>d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase EF1919
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.35  E-value=1.8e-12  Score=106.97  Aligned_cols=82  Identities=21%  Similarity=0.303  Sum_probs=73.0

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      .++|+++|++.+...+. ...++|..++|+|+|||+|+|+.|++++++.|++.|+++|.+.+...   |..||+|+  ||
T Consensus        56 ~~~~~~~g~~~~~~~~~-~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~--GF  132 (157)
T d2fiaa1          56 VHEEMIFSMATFCMEQE-QDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESK--GF  132 (157)
T ss_dssp             EETTEEEEEEEEEECTT-CSEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             EECCEEEEEEEEeecCc-cceeeecccEECHHHcCCCCcchhhHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHHC--CC
Confidence            37889999999766554 46789999999999999999999999999999999999999997763   89999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +.+++...
T Consensus       133 ~~v~e~~~  140 (157)
T d2fiaa1         133 TKIHESLQ  140 (157)
T ss_dssp             EEEEEECC
T ss_pred             EEeeeECC
Confidence            99998655

>d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein YvbK (BSu33890)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.35  E-value=1.9e-12  Score=110.07  Aligned_cols=81  Identities=20%  Similarity=0.164  Sum_probs=72.2

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      .++|+|||++.+...+.  ..++|..++|+|+|||+|+|+.|++.+++.+++.|++++.+.+...   |.+||+|+  ||
T Consensus        41 ~~~g~ivG~~~~~~~~~--~~~~l~~i~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~~~l~~~~~n~~a~~fYek~--GF  116 (152)
T d1yvka1          41 WAGDELAGVYVLLKTRP--QTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKC--GF  116 (152)
T ss_dssp             EETTEEEEEEEEEECST--TEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             EECCEEEEEEEEEecCC--CEEEEEEeeeCHhHcCCCcccHHHHHHHHHhhhhcccccceeeccCCHHHHHHHHHC--CC
Confidence            37899999998765554  6799999999999999999999999999999999999999988763   89999999  99


Q ss_pred             EEEEeecc
Q 048173          137 ASVAEVDT  144 (359)
Q Consensus       137 ~~~~e~~~  144 (359)
                      +..+..+.
T Consensus       117 ~~~~~~~~  124 (152)
T d1yvka1         117 RIQAIDHD  124 (152)
T ss_dssp             EEEEEETT
T ss_pred             EEEEEEcC
Confidence            99986543

>d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PH0736
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.35  E-value=1.3e-12  Score=111.97  Aligned_cols=80  Identities=18%  Similarity=0.334  Sum_probs=67.0

Q ss_pred             cCCCCcEEEEEEeeecC-------------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc--
Q 048173           59 FLNLGKVVAAVIYQIVP-------------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK--  123 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~-------------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~--  123 (359)
                      +.++|+|||++.+....             .+.++++|..++|+|+|||+|||+.|++.+++.|++.|++ +++.+..  
T Consensus        72 a~~d~~ivG~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~ak~~G~~-~~l~~~~~n  150 (182)
T d2gana1          72 YQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKD-PYVVTFPNL  150 (182)
T ss_dssp             EEESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCE-EEEEECGGG
T ss_pred             EEECCEEEEEEEEeccCcccccccccccccCCCCEEEEEEEEECHhhcCCCHHHHHHHHHHHHHHHcCCe-EEEEEccCC
Confidence            34789999998875432             1457899999999999999999999999999999999997 5555543  


Q ss_pred             -ccHHHHhhcccCcEEEEe
Q 048173          124 -ESSFFFLKQVQDFASVAE  141 (359)
Q Consensus       124 -~A~~Fw~K~~~GF~~~~e  141 (359)
                       .|.+||+|+  ||+.+.+
T Consensus       151 ~~a~~fY~k~--GF~~~~~  167 (182)
T d2gana1         151 EAYSYYYMKK--GFREIMR  167 (182)
T ss_dssp             SHHHHHHHTT--TEEEEEC
T ss_pred             HHHHHHHHHC--CCEEeeE
Confidence             489999999  9998876

>d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase YycN
species: Bacillus subtilis [TaxId: 1423]

Probab=99.35  E-value=1.1e-12  Score=105.43  Aligned_cols=80  Identities=19%  Similarity=0.166  Sum_probs=71.0

Q ss_pred             cCCCCcEEEEEEeeecCC-CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhccc
Q 048173           59 FLNLGKVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQ  134 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~  134 (359)
                      ..++|++||.+.++..+. ..+.++|..++|+|+|||+|+|+.|++.+++.+++.|+++|.+.+...   |..||+|+  
T Consensus        65 ~~~~~~~ig~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~--  142 (155)
T d1ufha_          65 KLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQT--  142 (155)
T ss_dssp             ESSSSCEEEEEEEEECTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHT--
T ss_pred             EEcCCeEEEEEEEEeeccCCCCceEEEEEEEEHHHcCCcccchHHHHHHHHhhhcCCceeEEEEcCCCHHHHHHHHHC--
Confidence            458899999999887655 446789999999999999999999999999999999999999987763   89999999  


Q ss_pred             CcEEEE
Q 048173          135 DFASVA  140 (359)
Q Consensus       135 GF~~~~  140 (359)
                      ||+.++
T Consensus       143 GF~~~g  148 (155)
T d1ufha_         143 GFQETD  148 (155)
T ss_dssp             TCCCCC
T ss_pred             CCEEEe
Confidence            999665

>d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase PF0028
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.35  E-value=6e-13  Score=110.24  Aligned_cols=78  Identities=14%  Similarity=0.138  Sum_probs=67.5

Q ss_pred             CCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc--cHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE--SSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~--A~~Fw~K~~~G  135 (359)
                      ++|+|||.+.+.....   ....++|..++|+|+|||+|+|+.|++++++.+++.|+++|.+.+..+  |..||+|+  |
T Consensus        60 ~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~~~~Rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~n~A~~~Y~k~--G  137 (149)
T d1vkca_          60 ERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEER--G  137 (149)
T ss_dssp             TTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHT--T
T ss_pred             cCCeEEEEEEEEeccCCCCCCcEEEEEEEEECHHHcCCChHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHC--C
Confidence            6789999887654432   447789999999999999999999999999999999999999987663  99999999  9


Q ss_pred             cEEEE
Q 048173          136 FASVA  140 (359)
Q Consensus       136 F~~~~  140 (359)
                      |+..+
T Consensus       138 F~~~~  142 (149)
T d1vkca_         138 YKARA  142 (149)
T ss_dssp             CCCCC
T ss_pred             CEEEE
Confidence            98543

>d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable spermine/spermidine acetyltransferase EF1086
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.33  E-value=3.4e-12  Score=104.82  Aligned_cols=82  Identities=13%  Similarity=0.167  Sum_probs=71.1

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.++..+.  ..++|..++|+|+|||+|+|+.|++.+++.+ ++.|+++|.+.+...   |..||+|+  ||
T Consensus        52 ~~~~~vG~~~~~~~~~--~~~~i~~~~v~~~~rgkGiG~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~--GF  127 (146)
T d2fl4a1          52 DGNQLIGYAMYGRWQD--GRVWLDRFLIDQRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQL--GF  127 (146)
T ss_dssp             ETTEEEEEEEEEECTT--SCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHT--TC
T ss_pred             ECCEEEEEEEEEEcCC--CeEEEeeEEEcHHHcCCChhhhhhhhhccccccccCceEEEeecccccHHHHHHHHHC--CC
Confidence            6889999999876655  4588999999999999999999999987655 567999999988774   99999999  99


Q ss_pred             EEEEeecccC
Q 048173          137 ASVAEVDTEG  146 (359)
Q Consensus       137 ~~~~e~~~~g  146 (359)
                      +.+++.+..|
T Consensus       128 ~~~g~~~~~g  137 (146)
T d2fl4a1         128 VFNGELDTNG  137 (146)
T ss_dssp             EEEEEECTTS
T ss_pred             EEeeEEeeCC
Confidence            9999977655

>d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Transcriptional regulator BH1968
species: Bacillus halodurans [TaxId: 86665]

Probab=99.31  E-value=2.2e-12  Score=105.27  Aligned_cols=81  Identities=20%  Similarity=0.186  Sum_probs=70.5

Q ss_pred             cCCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhh
Q 048173           59 FLNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLK  131 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K  131 (359)
                      +..+|+|||.+.+.+.+.    ....++|..++|+|+|||+|||+.|++++++.|++.|++.|.+.+..   .|..||+|
T Consensus        57 ~~~~g~iiG~~~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~l~~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k  136 (150)
T d1z4ea1          57 ACNGEEIVGMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQ  136 (150)
T ss_dssp             EEETTEEEEEEEEEEEECSHHHHCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHH
T ss_pred             EEECCceEEEEEEEeecccCcCCCCEEEEEEEEcCHHHcCCChhHHHHHHHHHHHHHcCCCEEEEEEcCCCHHHHHHHHH
Confidence            347999999998765443    44678999999999999999999999999999999999999998876   38999999


Q ss_pred             cccCcEEEEe
Q 048173          132 QVQDFASVAE  141 (359)
Q Consensus       132 ~~~GF~~~~e  141 (359)
                      +  ||+...+
T Consensus       137 ~--GF~~~~~  144 (150)
T d1z4ea1         137 L--GFKASHE  144 (150)
T ss_dssp             H--TCEEEEE
T ss_pred             C--CCEEcce
Confidence            9  9987665

>d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PH1933
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.30  E-value=2.6e-12  Score=104.25  Aligned_cols=83  Identities=17%  Similarity=0.155  Sum_probs=67.9

Q ss_pred             cCCCCcEEEEEEeeec----CCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhh
Q 048173           59 FLNLGKVVAAVIYQIV----PADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLK  131 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~----~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K  131 (359)
                      +..+|++||.+.+...    ..+...++|..++|+|+|||+|||+.|+.++++.|++.|.+.. +.+..   .|..||+|
T Consensus        60 ~~~~~~~vg~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~~~~~-~~v~~~N~~a~~~Y~k  138 (157)
T d1wwza1          60 AKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTIE-LWVGEKNYGAMNLYEK  138 (157)
T ss_dssp             EEETTEEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTCSEEE-EEEETTCHHHHHHHHH
T ss_pred             EEECCEEEEEEEeeccccccccCCcEEEEEEEEEEehhccchhHHHHHHHHHHHHHHhCCceE-EEEcCCCHHHHHHHHH
Confidence            3478999998886554    2244678999999999999999999999999999999997544 44443   48999999


Q ss_pred             cccCcEEEEeecc
Q 048173          132 QVQDFASVAEVDT  144 (359)
Q Consensus       132 ~~~GF~~~~e~~~  144 (359)
                      +  ||+.+++.+.
T Consensus       139 ~--GF~~~g~~~~  149 (157)
T d1wwza1         139 F--GFKKVGKSGI  149 (157)
T ss_dssp             T--TCEEEEEETT
T ss_pred             C--CCEEEeEEcc
Confidence            9  9999998554

>d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Protease synthase and sporulation negative regulatory protein PaiA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.28  E-value=6.7e-12  Score=106.02  Aligned_cols=82  Identities=16%  Similarity=0.139  Sum_probs=72.0

Q ss_pred             cCCCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHh
Q 048173           59 FLNLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFL  130 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~  130 (359)
                      +..+|+|||.+.+...+.     ....++|..++|+|+|||+|+|+.|++++++.+++.|+++|.+.+..   .|..||+
T Consensus        63 ~~~~~~ivG~~~~~~~~~~~~~~~~~~~~i~~i~v~~~~rgkGig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~fY~  142 (173)
T d1tiqa_          63 IYFDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYK  142 (173)
T ss_dssp             EEETTEEEEEEEEEEGGGSSSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHH
T ss_pred             EEECCEecceEEEEecCccccccCCCeEEEEEEEECHHHcCCCCCcchhHhhhhhhhhhhcchhhccccccCHHHHHHHH
Confidence            457899999988876543     33678999999999999999999999999999999999999998765   3999999


Q ss_pred             hcccCcEEEEee
Q 048173          131 KQVQDFASVAEV  142 (359)
Q Consensus       131 K~~~GF~~~~e~  142 (359)
                      |+  ||+..++.
T Consensus       143 k~--GF~~~g~~  152 (173)
T d1tiqa_         143 KM--GFVQTGAH  152 (173)
T ss_dssp             HT--TCEEEEEE
T ss_pred             HC--CCEEeeEE
Confidence            99  99998863

>d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable N-acetyltransferase PA0478
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.28  E-value=2.9e-12  Score=106.83  Aligned_cols=82  Identities=13%  Similarity=0.049  Sum_probs=69.5

Q ss_pred             ccCCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhh
Q 048173           58 SFLNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLK  131 (359)
Q Consensus        58 ~~~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K  131 (359)
                      .+..+|+|||.+.++..+.   +...++|..++|+|+|||+|||++|+.++++.+++.|+.+|.+.+...   |..||+|
T Consensus        53 va~~~~~ivG~~~~~~~~~~~~~~~~~~i~~~~V~p~~Rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k  132 (156)
T d2fe7a1          53 MCLSEGRPIGYAVFFYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRS  132 (156)
T ss_dssp             EEEETTEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred             EEeeCCEEEEEEeEeecccccccCCeEEeeeeeechhhhccChHHHHHHHHHHHHHHccCCcceEEEcCCCHHHHHHHHH
Confidence            3458899999887766543   457899999999999999999999999999999999999999888874   8999999


Q ss_pred             cccCcEEEEe
Q 048173          132 QVQDFASVAE  141 (359)
Q Consensus       132 ~~~GF~~~~e  141 (359)
                      +  ||+...+
T Consensus       133 ~--GF~~~~~  140 (156)
T d2fe7a1         133 I--GALPQDE  140 (156)
T ss_dssp             T--TCEECTT
T ss_pred             C--CCEEcCc
Confidence            9  9996554

>d1kzyc1 c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: 53BP1
domain: 53BP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.9e-12  Score=111.84  Aligned_cols=63  Identities=19%  Similarity=0.274  Sum_probs=57.7

Q ss_pred             HHHHHhcCcEEecC-------CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCCCcceec
Q 048173          267 VHLTKNLRGAVTSD-------GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLN  329 (359)
Q Consensus       267 ~klik~LGG~V~~d-------~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L~  329 (359)
                      ...++.+||.+.++       ...++|||++++.||.|||+|+|   |||+++||++|.++|++|||++|+|-
T Consensus        64 ~~~i~~~gg~v~~~~~~~~~~~~~~~~LIa~~~~RT~Kyl~Ala~g~piv~~~Wi~~c~~~~~~ld~~~YlLp  136 (153)
T d1kzyc1          64 ESQLRAGAGYILEDFNEAQCNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLP  136 (153)
T ss_dssp             HHHHHTTTCEECSSCCTTTTTTTCEEEEEESSCCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBCC
T ss_pred             hhhhhhcCCeEeeccccccccccceEEEecCCCCchHHHHHHHccCCcEEcHHHHHHHHHcCCcCChHHccCC
Confidence            46789999999875       34588999999999999999999   99999999999999999999999984

>d1cdza_ c.15.1.1 (A:) DNA-repair protein XRCC1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA-repair protein XRCC1
domain: DNA-repair protein XRCC1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=5.9e-12  Score=97.78  Aligned_cols=78  Identities=10%  Similarity=0.198  Sum_probs=61.3

Q ss_pred             CceEEEEcc-cCcchH--HHHHHHhcCcEEecC-CCCeeEEEeCCCC-CcHHHHhhcc---cccCHHHHHHHHhCCCCCC
Q 048173          251 KCFRITLMN-IADDSK--KVHLTKNLRGAVTSD-GITSTHVVAGKVR-KTLNFFTALS---WIVSPSWLKESFGEGRFVD  322 (359)
Q Consensus       251 ~~prI~fSg-l~~e~k--k~klik~LGG~V~~d-~~~~THLVa~~~~-RT~KfL~AIa---wIVsp~WL~eS~k~g~flD  322 (359)
                      .+.+|.++| ++...+  ..++|..+||.+.++ .+++||||+.... ++.+...+..   +||+|+||.||.++++.+|
T Consensus         7 ~g~~f~v~g~~~~~~~~~l~~~i~~~GG~v~~~~~~~~THvI~~~~~~~~~~~~~~~~~~i~iV~~~Wl~dc~~~~~~lp   86 (96)
T d1cdza_           7 QGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNEKQKLLP   86 (96)
T ss_dssp             TTCEEEECSCCCTHHHHHHHHHHHHTTCEECSSCSTTCSEEECSSCCCHHHHHHHTTCTTCEEECTHHHHHHHTTTSCCC
T ss_pred             CCcEEEEeCCCCHHHHHHHHHHHHHhCCEEeccCCCCceEEEEccCCcceeeehhhhCCCCeEEEEhHHHHHHHcCCcCC
Confidence            567888888 444332  247889999999887 8889999998653 3444444433   8999999999999999999


Q ss_pred             CCccee
Q 048173          323 ESFYML  328 (359)
Q Consensus       323 Ee~Y~L  328 (359)
                      +++|.+
T Consensus        87 ~~~Y~i   92 (96)
T d1cdza_          87 HQLYGV   92 (96)
T ss_dssp             GGGGBC
T ss_pred             chhcEe
Confidence            999987

>d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 3-N-acetyltransferase
species: Serratia marcescens [TaxId: 615]

Probab=99.25  E-value=2.2e-12  Score=103.45  Aligned_cols=75  Identities=19%  Similarity=0.213  Sum_probs=64.6

Q ss_pred             cCCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhc
Q 048173           59 FLNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQ  132 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~  132 (359)
                      +.++|+|||.+.+...+.   +...++|..++|+|+|||+|||+.|++++++.|++.|+++|++.+..   .|..||+|+
T Consensus        57 ~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~V~p~~Rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~~~  136 (137)
T d1bo4a_          57 AFDQEAVVGALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKL  136 (137)
T ss_dssp             EEETTEEEEEEEEEEEECSSSSCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC
T ss_pred             EEECCeeeeecccccccCccCCCCEEEEEEEEEcHHHhhhchhhHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHhc
Confidence            457899999887665432   45678899999999999999999999999999999999999998876   489999998


Q ss_pred             ccC
Q 048173          133 VQD  135 (359)
Q Consensus       133 ~~G  135 (359)
                        |
T Consensus       137 --G  137 (137)
T d1bo4a_         137 --G  137 (137)
T ss_dssp             ---
T ss_pred             --C
Confidence              7

>d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase TTHA1209
species: Thermus thermophilus [TaxId: 274]

Probab=99.23  E-value=2.6e-11  Score=101.10  Aligned_cols=82  Identities=26%  Similarity=0.279  Sum_probs=71.0

Q ss_pred             CCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcc
Q 048173           60 LNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQV  133 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~  133 (359)
                      .++|++||.+.+....+   ....++|..++|+|+|||+|+|+.|+..+++.+++.|+.++.+.+...   |..||+|+ 
T Consensus        65 ~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~~y~k~-  143 (174)
T d2cy2a1          65 SESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHL-  143 (174)
T ss_dssp             CTTSCEEEEEEEEECCSCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT-
T ss_pred             EcCCEEEeeeeccccccccccCCceEEEEEEEcHHHhhCCCchHHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHC-
Confidence            37889999887655544   245788999999999999999999999999999999999999887764   89999999 


Q ss_pred             cCcEEEEeec
Q 048173          134 QDFASVAEVD  143 (359)
Q Consensus       134 ~GF~~~~e~~  143 (359)
                       ||+.+++..
T Consensus       144 -GF~~~g~~~  152 (174)
T d2cy2a1         144 -GGVLLGERE  152 (174)
T ss_dssp             -TCEEEEEEE
T ss_pred             -CCEEEeEEE
Confidence             999988633

>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Histone acetyltransferase HPA2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.23  E-value=2.3e-11  Score=99.01  Aligned_cols=78  Identities=12%  Similarity=0.152  Sum_probs=68.7

Q ss_pred             cCCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhc
Q 048173           59 FLNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQ  132 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~  132 (359)
                      +.+++.|||.+.+...+.   ....++|..++|+|++||+|||++|++++++.+++.|+.+|.+.+...   |..||+|+
T Consensus        57 ~~~~~~ivg~~~~~~~~~~~~~~~~~~l~~l~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~  136 (150)
T d1qsma_          57 ESSSEKIIGMINFFNHMTTWDFKDKIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKV  136 (150)
T ss_dssp             ESSSCCEEEEEEEEEECCTTCSSCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHH
T ss_pred             hhhcCcEEEEEEEeeccccccccchheehhhhhhhcccCccHHHHHHHHHHhhhcccccccceeEEccCCHHHHHHHHHc
Confidence            457789999888766555   335678999999999999999999999999999999999999999873   89999999


Q ss_pred             ccCcEE
Q 048173          133 VQDFAS  138 (359)
Q Consensus       133 ~~GF~~  138 (359)
                        ||+.
T Consensus       137 --GFk~  140 (150)
T d1qsma_         137 --GYKA  140 (150)
T ss_dssp             --EEEC
T ss_pred             --CCCC
Confidence              9984

>d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase EF0244
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.21  E-value=2.1e-11  Score=100.37  Aligned_cols=82  Identities=16%  Similarity=0.153  Sum_probs=69.4

Q ss_pred             CCCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~  134 (359)
                      .++|++||.+.++....  ..+..+|..++|+|+|||+|||+.|++.+++.+++.|++++.+.+...   |..||+|+  
T Consensus        56 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~v~~~~rg~Gig~~ll~~l~~~~~~~g~~~i~~~~~~~N~~a~~~y~~~--  133 (161)
T d2ae6a1          56 ISGQQLAGFIEVHPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKH--  133 (161)
T ss_dssp             EETTEEEEEEEEECSSSCGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHT--
T ss_pred             EECCEEEEEEeecccccccccceEEEEEEEEeeccccccccccchhheeeccccccchhheehhccccHHHHHHHHHC--
Confidence            46899999887654333  224577999999999999999999999999999999999998887664   89999999  


Q ss_pred             CcEEEEeec
Q 048173          135 DFASVAEVD  143 (359)
Q Consensus       135 GF~~~~e~~  143 (359)
                      ||+..+...
T Consensus       134 GF~~~g~~~  142 (161)
T d2ae6a1         134 GFVQEAHFK  142 (161)
T ss_dssp             TCEEEEEEE
T ss_pred             CCEEEEEEe
Confidence            999988643

>d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative acetyltransferase PA4794
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.20  E-value=3.1e-11  Score=99.77  Aligned_cols=79  Identities=11%  Similarity=0.080  Sum_probs=66.4

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEecc---ccHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDK---ESSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~K~~~G  135 (359)
                      ..+|++||.+.+..... .++++|..++|+|+|||||||+.|+..+++.+++. +++.|.+.+..   .|..||+|+  |
T Consensus        56 ~~~g~~vG~~~~~~~~~-~~~~~i~~~~V~p~~rgkGig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~--G  132 (160)
T d2i6ca1          56 VHDGQVLGFANFYQWQH-GDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQL--G  132 (160)
T ss_dssp             EETTEEEEEEEEEEEET-TTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHT--T
T ss_pred             EECCEEEEEeeeecccc-CCEEEEEEeEeCHhHcCCcchhhhhHHHHHHHHHhccccceeeecccccchhhhHHHhC--C
Confidence            36899999988655433 46799999999999999999999999999999875 68888766665   389999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      |+.++.
T Consensus       133 F~~~~~  138 (160)
T d2i6ca1         133 YQPRAI  138 (160)
T ss_dssp             CEEEEE
T ss_pred             CEEEEE
Confidence            998763

>d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Phosphinothricin acetyltransferase
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.20  E-value=3.1e-11  Score=99.76  Aligned_cols=84  Identities=17%  Similarity=0.078  Sum_probs=70.2

Q ss_pred             cCCCCcEEEEEEeeecCCC--CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIVPAD--TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d--~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~  133 (359)
                      +..+|+|||.+.+....+.  ...+.+..++|+|+|||+|+|+.|+.++++.|++.|++++.+.+..+   |..||+|+ 
T Consensus        57 a~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~v~p~~rg~Glg~~ll~~~~~~a~~~g~~~l~~~v~~~N~~a~~~y~k~-  135 (163)
T d1yr0a1          57 AILDGKVAGYASYGDWRAFDGYRHTREHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESL-  135 (163)
T ss_dssp             EEETTEEEEEEEEEESSSSGGGTTEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHT-
T ss_pred             EEECCeEEEeecceeecccccccceEEEEeeeeecccCCCCceeeeecccccccccccceEEEEEecCCHHHHHHHHHC-
Confidence            3468999998776554432  24577889999999999999999999999999999999998887763   89999999 


Q ss_pred             cCcEEEEeecc
Q 048173          134 QDFASVAEVDT  144 (359)
Q Consensus       134 ~GF~~~~e~~~  144 (359)
                       ||+.++....
T Consensus       136 -GF~~~G~~~~  145 (163)
T d1yr0a1         136 -GFRVVGRFSE  145 (163)
T ss_dssp             -TCEEEEEEEE
T ss_pred             -CCEEEEEEee
Confidence             9999886443

>d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Diamine acetyltransferase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.4e-11  Score=101.54  Aligned_cols=82  Identities=12%  Similarity=0.058  Sum_probs=71.2

Q ss_pred             cCCCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~  133 (359)
                      ...++++||.+.+...+.  .....+|..++|+|+|||+|+|++|++++++.+++.|+++|.+.+...   |..||+|+ 
T Consensus        63 ~~~~~~ivG~~~~~~~~~~~~~~~~~i~~l~v~~~~rg~Gig~~L~~~l~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~-  141 (167)
T d2b5ga1          63 TPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRR-  141 (167)
T ss_dssp             CTTCCCEEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTT-
T ss_pred             EeeCCeEEEEEEEEeecccccccceecceeeeeeccccCCCchhhhhhhhhhhcccCcceeeeecccCcHHHHHHHHHC-
Confidence            447889999887766554  346788999999999999999999999999999999999999888774   99999999 


Q ss_pred             cCcEEEEee
Q 048173          134 QDFASVAEV  142 (359)
Q Consensus       134 ~GF~~~~e~  142 (359)
                       ||+.+++.
T Consensus       142 -GF~~~~~~  149 (167)
T d2b5ga1         142 -GASDLSSE  149 (167)
T ss_dssp             -TCEEHHHH
T ss_pred             -CCEECcEe
Confidence             99987753

>d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative phosphinothricin acetyltransferase YwnH
species: Bacillus subtilis [TaxId: 1423]

Probab=99.20  E-value=3.8e-11  Score=99.87  Aligned_cols=79  Identities=22%  Similarity=0.230  Sum_probs=65.8

Q ss_pred             CCCCcEEEEEEeeecCCCC---ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcc
Q 048173           60 LNLGKVVAAVIYQIVPADT---QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQV  133 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~---~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~  133 (359)
                      .++|+|||.+.+....+..   ..+ +-.++|+|+|||+|||+.|++++++.+++.|+++|.+.+...   |..||+|+ 
T Consensus        58 ~~~~~ivG~~~~~~~~~~~~~~~~~-~~~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~i~~~v~~~N~~a~~~y~k~-  135 (165)
T d1vhsa_          58 DENGNVAAWISFETFYGRPAYNKTA-EVSIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKH-  135 (165)
T ss_dssp             CTTSCEEEEEEEEESSSSGGGTTEE-EEEEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHT-
T ss_pred             ecCCceEeeeeeeeccccccccceE-EEeeecCchhhcccccchhhhhhhhhhccccceeEEEEEecCCHHHHHHHHHC-
Confidence            4688999988865544322   234 345899999999999999999999999999999999887774   89999999 


Q ss_pred             cCcEEEEe
Q 048173          134 QDFASVAE  141 (359)
Q Consensus       134 ~GF~~~~e  141 (359)
                       ||+.++-
T Consensus       136 -GF~~~g~  142 (165)
T d1vhsa_         136 -GFAEWGL  142 (165)
T ss_dssp             -TCEEEEE
T ss_pred             -CCEEEEE
Confidence             9998875

>d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA4866
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.18  E-value=4e-11  Score=100.11  Aligned_cols=83  Identities=16%  Similarity=0.089  Sum_probs=69.7

Q ss_pred             CCCCcEEEEEEeeecCCCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIVPADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~  134 (359)
                      ..+|++||.+.+....+..  +...+-.++|+|+|||+|+|+.|++++++.+++.|+++|.+.+...   |..||+|+  
T Consensus        57 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~i~v~p~~rg~G~g~~l~~~~~~~a~~~g~~~l~~~v~~~N~~s~~~y~k~--  134 (169)
T d1yvoa1          57 DAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRL--  134 (169)
T ss_dssp             CTTCCEEEEEEEEESSSSGGGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT--
T ss_pred             ecCCCEEEeeccccccccccccceEEEEeecChhhhcCCeeeeeeeeeccccccccceEEEEEeccCcHHHHHHHhcC--
Confidence            3678999999876555422  3466777999999999999999999999999999999998888774   78899999  


Q ss_pred             CcEEEEeecc
Q 048173          135 DFASVAEVDT  144 (359)
Q Consensus       135 GF~~~~e~~~  144 (359)
                      ||+.++....
T Consensus       135 GF~~~g~~~~  144 (169)
T d1yvoa1         135 GFEISGQMPQ  144 (169)
T ss_dssp             TCEEEEEEEE
T ss_pred             CcEEEEEEee
Confidence            9999886433

>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase PA4026
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.18  E-value=1.2e-11  Score=101.27  Aligned_cols=82  Identities=6%  Similarity=-0.107  Sum_probs=70.8

Q ss_pred             ccCCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhh
Q 048173           58 SFLNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLK  131 (359)
Q Consensus        58 ~~~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K  131 (359)
                      ...++|++||.+.+...+.   ....++|..++|+|++||+|+|+.|++.+++.|++.|+++|.+.+...   |..||+|
T Consensus        53 ~~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~~~V~~~~r~~Gig~~Ll~~~~~~ak~~g~~~i~l~~~~~N~~a~~~Y~k  132 (153)
T d2euia1          53 LADEEDRLLGFCQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYES  132 (153)
T ss_dssp             ECSSSCCEEEEEEEEEEEETTTTEEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHT
T ss_pred             EEecCCeEEEEEeeecccccccccceEEecceeeeecccCcchhhHHHHHHhhhHHHhhhccceEEecCCCHHHHHHHHH
Confidence            3458899999888755443   346789999999999999999999999999999999999999998874   9999999


Q ss_pred             cccCcEEEEe
Q 048173          132 QVQDFASVAE  141 (359)
Q Consensus       132 ~~~GF~~~~e  141 (359)
                      +  ||+..++
T Consensus       133 ~--GF~~~~~  140 (153)
T d2euia1         133 I--GFREDQE  140 (153)
T ss_dssp             T--TCBCCCS
T ss_pred             C--CCEEcce
Confidence            9  9986554

>d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Diamine acetyltransferase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=8.3e-11  Score=95.87  Aligned_cols=84  Identities=14%  Similarity=0.054  Sum_probs=67.6

Q ss_pred             ccCCCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhc
Q 048173           58 SFLNLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQ  132 (359)
Q Consensus        58 ~~~~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~  132 (359)
                      ....++.++|...+...+.  ....++|..++|+++|||+|||+.|++++++.+++.|+++|.+.+..   .|..||+|+
T Consensus        62 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~  141 (167)
T d2beia1          62 GKLLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKAL  141 (167)
T ss_dssp             ----CCEEEEEEEEEEEEETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred             ceeecceeeeEEEeecccccccccceeccceecCHhhcCCCcchhhHHHHHHHHhhhcccccceeeccCCHHHHHHHHHC
Confidence            3346677888665444333  44788899999999999999999999999999999999999988775   489999999


Q ss_pred             ccCcEEEEeec
Q 048173          133 VQDFASVAEVD  143 (359)
Q Consensus       133 ~~GF~~~~e~~  143 (359)
                        ||+.+++.+
T Consensus       142 --GF~~~~~~~  150 (167)
T d2beia1         142 --GAQDLTEAE  150 (167)
T ss_dssp             --TCEEHHHHH
T ss_pred             --CCEEccEec
Confidence              999887643

>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Mycothiol synthase MshD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.06  E-value=2.9e-10  Score=101.65  Aligned_cols=81  Identities=14%  Similarity=0.157  Sum_probs=68.2

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc----------CCcEEEEEeccc---c
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV----------GIRTIFCWDDKE---S  125 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~----------GI~~I~l~a~~~---A  125 (359)
                      ...+|+|||.+.+.....+...++|..++|+|+|||+|||+.|+.++++.|++.          |++.|.|.++..   |
T Consensus       209 ~~~~g~vvG~~~~~~~~~~~~~~~i~~~~V~p~~RGrGlG~~Ll~~~~~~~~~~g~~~~~~~~~g~~~i~L~V~~~N~~A  288 (308)
T d1p0ha_         209 RERPGRLLGFHWTKVHPDHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAA  288 (308)
T ss_dssp             ----CCEEEEEEEECCTTSTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHH
T ss_pred             cccCCeEEEEEEEEEcCCCCcEEEEeccEECHHHcCCCHHHHHHHHHHHHHHHhCCcceeeecCCccEEEEeccCCCHHH
Confidence            347899999988777776678899999999999999999999999999999988          667777777653   8


Q ss_pred             HHHHhhcccCcEEEEe
Q 048173          126 SFFFLKQVQDFASVAE  141 (359)
Q Consensus       126 ~~Fw~K~~~GF~~~~e  141 (359)
                      ..||+++  ||+.++.
T Consensus       289 ~~lY~~~--GF~~~~~  302 (308)
T d1p0ha_         289 VRTYQSL--GFTTYSV  302 (308)
T ss_dssp             HHHHHHT--TCEEEEE
T ss_pred             HHHHHHC--CCEEece
Confidence            9999999  9998874

>d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2290
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.00  E-value=8.3e-10  Score=90.44  Aligned_cols=78  Identities=17%  Similarity=0.181  Sum_probs=66.1

Q ss_pred             CCCcEEEEEEeeecCCCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccC
Q 048173           61 NLGKVVAAVIYQIVPADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      .+|++||.+.+....+..  ..++| .++|+|+|||+|+|+.|+.++++.+++.|+++|.+.+...   |..||+|+  |
T Consensus        60 ~~~~~vG~~~~~~~~~~~~~~~~~~-~~~v~~~~rg~Gig~~l~~~~~~~a~~~~~~~i~~~v~~~N~~s~~~y~k~--G  136 (164)
T d2ge3a1          60 ADGDVIGWCDIRRQDRATRAHCGTL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKI--G  136 (164)
T ss_dssp             ETTEEEEEEEEEECCSTTTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHH--T
T ss_pred             ECCEEEEEEEeeccccCCcCcEEEE-EEEeChhhccccccccchhhhhheeccccccccccccCcchHHHHHHHHHC--C
Confidence            678999998876665532  23444 4799999999999999999999999999999998888775   88999999  9


Q ss_pred             cEEEEe
Q 048173          136 FASVAE  141 (359)
Q Consensus       136 F~~~~e  141 (359)
                      |+..+.
T Consensus       137 F~~~g~  142 (164)
T d2ge3a1         137 FAHEGR  142 (164)
T ss_dssp             CEEEEE
T ss_pred             CEEEEE
Confidence            998875

>d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Aminoglycoside 2'-N-acetyltransferase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.00  E-value=5.4e-10  Score=96.42  Aligned_cols=97  Identities=11%  Similarity=0.106  Sum_probs=76.5

Q ss_pred             CCccchhhhhhccCccccccccccceeeccCCCCcEEEEEEeeec-----CCCCceeeeeEEEeccCccccChHHHHHHH
Q 048173           30 GILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIV-----PADTQYAEVPLAAVSSIYQHKGVGRLLYLK  104 (359)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~IVgvi~l~i~-----~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~  104 (359)
                      |-+..+.|+...+.+|-|+           .++|++||.+.+...     ......++|..+||+|+|||+|||++|+++
T Consensus        34 ~d~~~~~~~~~~~~~~~l~-----------~~~~~~v~~~~~~~~~~~~~~~~~~~~~I~~v~V~p~~Rg~Gig~~Ll~~  102 (181)
T d1m4ia_          34 GDFTETDWEHTLGGMHALI-----------WHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDA  102 (181)
T ss_dssp             TCCCHHHHHHTCSSEEEEE-----------EETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHH
T ss_pred             CCCCHHHHhhhcCceEEEE-----------EeCCceeEEEEEEEEEEecCCcccceEEEEEEEEcHHHCCCHHHHHHHHH
Confidence            4455566777778888654           368899997765421     112256899999999999999999999999


Q ss_pred             HHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173          105 LRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA  140 (359)
Q Consensus       105 l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~  140 (359)
                      +++.+++.| ..+++.++..+.+||.|.  ||+...
T Consensus       103 ~~~~~r~~~-~~~~l~~~~~~~~fY~~~--G~~~~~  135 (181)
T d1m4ia_         103 VEQVMRGAY-QLGALSSSARARRLYASR--GWLPWH  135 (181)
T ss_dssp             HHHHHHHHC-SEEEEECCTTTHHHHHHT--TCEECC
T ss_pred             HHHHHHhcC-CEEEEecchhhHHHHHHc--CCEEcC
Confidence            999999876 566788888899999999  998643

>d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein SA2309
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.96  E-value=5.2e-10  Score=89.73  Aligned_cols=70  Identities=16%  Similarity=0.195  Sum_probs=59.2

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhc
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQ  132 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~  132 (359)
                      ..++|++||++.+...++  +.++|.+++|+|++||+|||++|++++++.|++.|.+-+.+-.+  +..||+|+
T Consensus        16 ~~~~g~~vg~~~~~~~~~--~~~~i~~~~V~p~~RG~Gig~~Lv~~~l~~Ar~~g~kvvp~c~y--~~~~~~k~   85 (102)
T d1r57a_          16 GDDENNALAEITYRFVDN--NEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASCSF--AKHMLEKE   85 (102)
T ss_dssp             ESSSTTEEEEEEEEESSS--SEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCEEEESSHH--HHHHHHHC
T ss_pred             EEeCCceEEEEEEEEcCC--CEEEEEEEEEChHHCCccHHHHHHHHHHHHHHHCCCEEEEecHh--HHHHHHhC
Confidence            348999999999765544  56999999999999999999999999999999999965544443  57899987

>d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein MW0638
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.95  E-value=4.9e-10  Score=88.84  Aligned_cols=58  Identities=17%  Similarity=0.310  Sum_probs=51.9

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI  117 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I  117 (359)
                      +..+|+|||.+.+++... .++++|..++|+|+|||+|||+.|++++++.|++.|+++|
T Consensus        58 a~~~~~ivG~~~~~~~~~-~~~~~i~~l~V~~~~RgkGiG~~Ll~~~~~~a~~~g~~~i  115 (118)
T d2aj6a1          58 YENEGQLIAFIWGHFSNE-KSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRI  115 (118)
T ss_dssp             EEETTEEEEEEEEEEETT-TTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCC
T ss_pred             EEECCEEEEEeeeccccC-CCeEEEEEEEEchhhccCHHHHHHHHHHHHHHHHhCCCEE
Confidence            457899999998776554 4679999999999999999999999999999999999876

>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=1.1e-09  Score=84.65  Aligned_cols=80  Identities=10%  Similarity=0.125  Sum_probs=58.8

Q ss_pred             CceEEEEcc-cCcc--hHHHHHHHhcCcEEecC------CCCeeEEEeCCC---CC-cHHHHhhcc---cccCHHHHHHH
Q 048173          251 KCFRITLMN-IADD--SKKVHLTKNLRGAVTSD------GITSTHVVAGKV---RK-TLNFFTALS---WIVSPSWLKES  314 (359)
Q Consensus       251 ~~prI~fSg-l~~e--~kk~klik~LGG~V~~d------~~~~THLVa~~~---~R-T~KfL~AIa---wIVsp~WL~eS  314 (359)
                      ++..|+|+| +++.  ....++|+.+||.++.+      ...+||+++...   ++ ..+...+..   .||+|+||.||
T Consensus         5 ~g~~i~~~g~~~~~~~~~L~~li~~~GG~v~~~~~~~~~~~~~t~~~i~~~~~~~~~~~~~~~~~~~~i~iV~~~Wl~ds   84 (102)
T d1t15a2           5 RGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDS   84 (102)
T ss_dssp             TTCEEEECSCCSSSCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCEEEHHHHHHH
T ss_pred             CCcEEEEeCCCCCcCHHHHHHHHHHhCCEEeeccccccccccccchheecccccchhhHHHHHHHhCCCcEEeeHHHHHH
Confidence            457899998 4442  33458899999999764      457899887542   22 233333333   99999999999


Q ss_pred             HhCCCCCCCCcceecC
Q 048173          315 FGEGRFVDESFYMLND  330 (359)
Q Consensus       315 ~k~g~flDEe~Y~L~D  330 (359)
                      ..+++.+|+++|+|..
T Consensus        85 i~~~~~lp~~~Yll~~  100 (102)
T d1t15a2          85 VALYQCQELDTYLIPQ  100 (102)
T ss_dssp             HHHTSCCCSGGGBCCC
T ss_pred             HHhCCcCCchhccCCC
Confidence            9999999999998753

>d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Hypothetical protein cg14615-pa
domain: Hypothetical protein cg14615-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.79  E-value=6.8e-09  Score=96.63  Aligned_cols=74  Identities=14%  Similarity=0.229  Sum_probs=65.1

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      .++|++||.+..  .    ++++|..++|+|+|||+|+|+.|+.++.+.+++.|+..+++.+..+   |..||+|+  ||
T Consensus       211 ~e~G~lv~w~~~--~----~~g~l~~l~V~p~~r~~G~g~~l~~~~~~~~~~~g~~~v~~~v~~~N~~s~~ly~kl--GF  282 (297)
T d1sqha_         211 SDTGELIAWIFQ--N----DFSGLGMLQVLPKAERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRI--GY  282 (297)
T ss_dssp             TTTCCEEEEEEE--C----TTSSEEEEEECGGGCSSSHHHHHHHHHHHHHHHHSCSCEEEEEETTCHHHHHHHHHH--TC
T ss_pred             CCCCCEEEEEEE--C----CCEEEEEEEEChHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCcHHHHHHHHHC--CC
Confidence            467999998863  2    2367999999999999999999999999999999999998877764   89999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +.+++
T Consensus       283 ~~~~~  287 (297)
T d1sqha_         283 QKDLV  287 (297)
T ss_dssp             EEEEE
T ss_pred             EEeeE
Confidence            98875

>d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase YdaF
species: Bacillus subtilis [TaxId: 1423]

Probab=98.77  E-value=1.7e-08  Score=84.67  Aligned_cols=78  Identities=12%  Similarity=0.069  Sum_probs=68.2

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      .+|++||.+.+.-..++...++|. +.|+|++||+|+|+.++.++.+.+ .+.|+++|.+.+...   |..+++|+  ||
T Consensus        75 ~~~~~iG~~~~~~~~~~~~~~eig-~~i~~~~~g~G~~~e~~~~~~~~af~~~~~~~i~~~v~~~N~~s~~~~~k~--GF  151 (180)
T d1nsla_          75 YDGSLCGMISLHNLDQVNRKAEIG-YWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERI--GF  151 (180)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHH--TC
T ss_pred             ECCcEEEEEEeeecccCCCeEEEE-EeecccccccccchhhhhhhhhccccccCcceeecccccccHHHHHHHHHC--CC
Confidence            578999998777655655778997 679999999999999999999987 778999998888874   99999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       152 ~~eg~  156 (180)
T d1nsla_         152 LEEGK  156 (180)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            98875

>d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Hypothetical protein EF1021
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.77  E-value=7.1e-09  Score=93.98  Aligned_cols=78  Identities=13%  Similarity=0.061  Sum_probs=65.7

Q ss_pred             CCCCcEEEEEEeeec---CCCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhccc
Q 048173           60 LNLGKVVAAVIYQIV---PADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQ  134 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~---~~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~  134 (359)
                      .++|+|||.+.+...   ..+.  ..+.|..+||+|+|||+|+|+.|++++++.+++.|+..+++++.  +.+||+|.  
T Consensus        49 ~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~rg~G~~~~l~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~~--  124 (285)
T d2hv2a2          49 LIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVALSYLAPF--SYPFYRQY--  124 (285)
T ss_dssp             EETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHTT--
T ss_pred             EECCEEEEEEEEEEeEEEECCeeeeEEEEEEEEECHHHcCCChHHHHHHHHHHHHHHhCCceeeeecc--chhhHhcC--
Confidence            488999999875322   1222  34789999999999999999999999999999999999998875  48999999  


Q ss_pred             CcEEEEe
Q 048173          135 DFASVAE  141 (359)
Q Consensus       135 GF~~~~e  141 (359)
                      ||+.+++
T Consensus       125 Gf~~~~~  131 (285)
T d2hv2a2         125 GYEQTFE  131 (285)
T ss_dssp             TCEECCE
T ss_pred             CcEEeee
Confidence            9997765

>d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Putative acetyltransferase EF2353
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.75  E-value=1.1e-08  Score=92.66  Aligned_cols=80  Identities=5%  Similarity=0.133  Sum_probs=67.1

Q ss_pred             ccCCCCcEEEEEEeeecC---CCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhc
Q 048173           58 SFLNLGKVVAAVIYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQ  132 (359)
Q Consensus        58 ~~~~~g~IVgvi~l~i~~---~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~  132 (359)
                      .+.++|+|||++.++...   .+.  ..++|..++|+|+|||+|+|+.|+.++++.+++.|+.-+++++.  +.+||+|.
T Consensus        55 ~~~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~r~~G~~~~L~~~~~~~~~~~~~~~~~l~~~--~~~~Y~~~  132 (291)
T d2i00a2          55 GWFHENQLISQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY--NIPYYRRK  132 (291)
T ss_dssp             EEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHHT
T ss_pred             EEEECCEEEEEEEEEEeEEEECCeeeeEEEEEEEEEchhhcCCChHHHHHHHHHHHHHhcCCcEEEeecc--chhhHhcC
Confidence            344899999988764322   222  45889999999999999999999999999999999998888775  48999999


Q ss_pred             ccCcEEEEe
Q 048173          133 VQDFASVAE  141 (359)
Q Consensus       133 ~~GF~~~~e  141 (359)
                        ||...++
T Consensus       133 --Gf~~~~~  139 (291)
T d2i00a2         133 --GWEIMSD  139 (291)
T ss_dssp             --TCEEEEE
T ss_pred             --CCEEecc
Confidence              9998775

>d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein PA3270
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.70  E-value=3.7e-08  Score=83.54  Aligned_cols=79  Identities=8%  Similarity=-0.016  Sum_probs=70.1

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      ++|++||.+.++-..+....++|+.+.|+++|||+|+|+..+..+.+.+ ..+|+++|.+.+...   |..+++|+  ||
T Consensus        65 ~~g~~iG~i~l~~~~~~~~~~eiG~~~l~~~~~g~G~~~ea~~~l~~~af~~lg~~~i~~~v~~~N~aS~~~~~k~--Gf  142 (183)
T d1yrea1          65 LGVQLVGTTRFAEFLPALPACEIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKL--GA  142 (183)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHH--TC
T ss_pred             ECCEEEEEEEeeeccccCCeEEEEEEEecHHHcCCccchhHHHHHhhhhhhccCcceEEeecccCCHHHHhhHhcc--Ce
Confidence            6899999999876556667899999999999999999999999999988 678999998777763   99999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       143 ~~eg~  147 (183)
T d1yrea1         143 QREGV  147 (183)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            98775

>d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: EF1021-like
domain: Putative acetyltransferase Ava4977
species: Anabaena variabilis [TaxId: 1172]

Probab=98.70  E-value=2.2e-08  Score=90.67  Aligned_cols=81  Identities=10%  Similarity=0.131  Sum_probs=66.8

Q ss_pred             cCCCCcEEEEEEeeecCC--CC---ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcc
Q 048173           59 FLNLGKVVAAVIYQIVPA--DT---QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQV  133 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~--d~---~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~  133 (359)
                      +.++|+|||++.+.....  ++   ..+.|..++|+|+|||+|+|+.|++++.+.+++.|+.-.++++.  +.+||+|. 
T Consensus        45 ~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~rg~G~~~~L~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~~-  121 (283)
T d2ozga2          45 IYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIPISVLYPA--TQRLYRKA-  121 (283)
T ss_dssp             EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHHT-
T ss_pred             EEECCEEEEEEEEEEeeeeECCeeeeEeeEEEEEECcccccCChHHHHHHHHHHHHHhcCceEEEccCC--ccchHHcC-
Confidence            347999999987654321  11   44789999999999999999999999999999999987777765  48999999 


Q ss_pred             cCcEEEEeec
Q 048173          134 QDFASVAEVD  143 (359)
Q Consensus       134 ~GF~~~~e~~  143 (359)
                       ||+......
T Consensus       122 -Gf~~~~~~~  130 (283)
T d2ozga2         122 -GYEQAGSSC  130 (283)
T ss_dssp             -TCEEEEEEE
T ss_pred             -CCeEeceEE
Confidence             999877633

>d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative ribosomal-protein-serine acetyltransferase VC1889
species: Vibrio cholerae [TaxId: 666]

Probab=98.69  E-value=2.6e-08  Score=83.87  Aligned_cols=80  Identities=15%  Similarity=0.059  Sum_probs=69.6

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~GF  136 (359)
                      +++++||.+.++...++...++|. +.|+++|||+|+|+.++..+.+.+ ..+|+++|...+...   |...++|+  ||
T Consensus        76 ~~~~~iG~~~l~~~~~~~~~~eig-~~i~~~~~g~G~~~e~l~~l~~~af~~~~~~~i~~~~~~~N~~s~~l~ek~--GF  152 (178)
T d2fcka1          76 QTQTLVGMVAINEFYHTFNMASLG-YWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRC--GA  152 (178)
T ss_dssp             TTCCEEEEEEEEEEEGGGTEEEEE-EEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHT--TC
T ss_pred             cCCceEEEEeecccccCCCeEEEE-EeeecccccchhhhhhhheeeeeeccccCcceeeEecCCCcHHHHHHHHHC--CC
Confidence            578999998887655656789998 689999999999999999999999 667999999888874   99999999  99


Q ss_pred             EEEEeec
Q 048173          137 ASVAEVD  143 (359)
Q Consensus       137 ~~~~e~~  143 (359)
                      +..+...
T Consensus       153 ~~eg~~~  159 (178)
T d2fcka1         153 NREQLAP  159 (178)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEe
Confidence            9988633

>d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: L7/L12-Ribosomal-protein-serine acetyltransferase RimL
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.61  E-value=9.3e-08  Score=79.88  Aligned_cols=78  Identities=10%  Similarity=0.058  Sum_probs=67.8

Q ss_pred             CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173           61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDK---ESSFFFLKQVQDF  136 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~K~~~GF  136 (359)
                      .+|++||.+.++...+....++|.. .|+++|||+|+|+..+..+.+.+ ...|++++.+.+..   .|..+++|+  ||
T Consensus        72 ~~~~~iG~~~~~~~~~~~~~~eig~-~i~~~~~gkG~~~ea~~~l~~~~f~~~~~~~l~a~~~~~N~~S~~~~~k~--Gf  148 (174)
T d1s7ka1          72 CQNEMAGVLSFNAIEPINKAAYIGY-WLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRN--HF  148 (174)
T ss_dssp             ETTEEEEEEEEEEEETTTTEEEEEE-EECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHT--TC
T ss_pred             EcCCceEEEeeccccCCCCeEEEEE-EEeehhccchhHHHHHHHHHhhhhhhcCcccceeecccCcHHHHHHHHHC--CC
Confidence            5689999999877666667788875 68999999999999999999999 66899999888766   399999999  99


Q ss_pred             EEEEe
Q 048173          137 ASVAE  141 (359)
Q Consensus       137 ~~~~e  141 (359)
                      +..+.
T Consensus       149 ~~eG~  153 (174)
T d1s7ka1         149 TLEGC  153 (174)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            98875

>d1in1a_ c.15.1.2 (A:) DNA ligase III alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA ligase
domain: DNA ligase III alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.3e-07  Score=74.20  Aligned_cols=67  Identities=21%  Similarity=0.296  Sum_probs=51.6

Q ss_pred             CCceEEEEcccCcc-hHHHHHHHhcCcEEecC--CCCeeEEEeCCCCCcHHHHhhcc-cccCHHHHHHHHhCCCCCCC
Q 048173          250 GKCFRITLMNIADD-SKKVHLTKNLRGAVTSD--GITSTHVVAGKVRKTLNFFTALS-WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       250 ~~~prI~fSgl~~e-~kk~klik~LGG~V~~d--~~~~THLVa~~~~RT~KfL~AIa-wIVsp~WL~eS~k~g~flDE  323 (359)
                      =.+.+|.+.+..++ ....++|..+||.+..+  .+.+||||+.+...       -. -||+|+||.||.++++.|++
T Consensus        17 F~G~~~~i~~~~p~~~~L~r~i~a~GG~~~~~~~~~~vTHvI~~~~~~-------~~~~iV~p~Wi~dci~~~~lLPp   87 (88)
T d1in1a_          17 FTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKN-------PAAQQVSPEWIWACIRKRRLVAP   87 (88)
T ss_dssp             STTCBCCCCTTSTTHHHHHHHHHHHTCBCCCTTCCTTCCCEESCCTTC-------TTSCEECHHHHHHHHHHTSCCCC
T ss_pred             hCCeEEEECCCCCCHHHHHHHHHHhCCEEeeeccCCCceEEEEcCCCC-------CCcEEEehHHHHHHHHcCCcCCC
Confidence            34566777777664 34457889999998775  45799999986521       12 89999999999999999985

>d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein Rv1347c/MT1389
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.31  E-value=8.6e-07  Score=75.78  Aligned_cols=82  Identities=17%  Similarity=0.071  Sum_probs=67.0

Q ss_pred             CCCcEEEEEEeeecC---------CCCceeeeeEEEeccCccccChHHHHHHHHHHHH--HHcCCcEEEEEeccc---cH
Q 048173           61 NLGKVVAAVIYQIVP---------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL--QSVGIRTIFCWDDKE---SS  126 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~---------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l--k~~GI~~I~l~a~~~---A~  126 (359)
                      .+|+.+|.+.+....         ....-+.|..+.++++|||+|+|+.++.++.+.+  +..|+.+|.+.+...   |.
T Consensus        89 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GkG~gt~~l~~li~~~f~~~~~~~ri~~~v~~~N~~s~  168 (198)
T d1yk3a1          89 WHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATR  168 (198)
T ss_dssp             ETTEEEEEEEEEEGGGBGGGGSSCCCTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHH
T ss_pred             ECCEEEEEEEEEeccccccccccccCCCceEEEEEEEChhhcCCcHHHHHHHHHHHHHHhhcCCccEEEEEeCCCCHHHH
Confidence            578899987754322         1222345888999999999999999999999987  367999999988874   99


Q ss_pred             HHHhhcccCcEEEEeecc
Q 048173          127 FFFLKQVQDFASVAEVDT  144 (359)
Q Consensus       127 ~Fw~K~~~GF~~~~e~~~  144 (359)
                      .+|+|+  ||+..++.+.
T Consensus       169 rl~erl--GF~~~ge~d~  184 (198)
T d1yk3a1         169 RLCEWA--GCKFLGEHDT  184 (198)
T ss_dssp             HHHHHH--TCEEEEEEEC
T ss_pred             HHHHHc--CCEEEeEEec
Confidence            999999  9999999665

>d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltranferase Atu2435
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.94  E-value=1.9e-05  Score=63.27  Aligned_cols=81  Identities=10%  Similarity=0.003  Sum_probs=66.5

Q ss_pred             CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccC
Q 048173           60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQD  135 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~G  135 (359)
                      .+++.+||.+.+...+.. ..+++. +.+.++|+|+|+|+.++..+...+ +.+|+++|.+.+..+   |...++|+  |
T Consensus        68 ~~~~~~ig~~~~~~~~~~-~~~~~g-~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~v~~~v~~~N~~S~rl~ek~--G  143 (164)
T d2fsra1          68 GETGECIGQIGINHGPLF-PEKELG-WLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERI--G  143 (164)
T ss_dssp             TTTTEEEEEEEEECSTTC-SSCEEE-EEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHT--T
T ss_pred             cCCCeEEEEEEeeccCcc-ccceEe-eEeeeeeccccccccceeEEEeeccccccceeEEEEECcCCHHHHHHHHHC--C
Confidence            478899999988765543 345454 689999999999999999888866 578999999988874   99999999  9


Q ss_pred             cEEEEeecc
Q 048173          136 FASVAEVDT  144 (359)
Q Consensus       136 F~~~~e~~~  144 (359)
                      |+..++.+.
T Consensus       144 F~~eg~~~~  152 (164)
T d2fsra1         144 GTLDPLAPR  152 (164)
T ss_dssp             CEECTTSCC
T ss_pred             CEEeeeEcc
Confidence            998876555

>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Mycothiol synthase MshD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.92  E-value=4.5e-06  Score=73.81  Aligned_cols=79  Identities=8%  Similarity=-0.058  Sum_probs=59.3

Q ss_pred             ccCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcE
Q 048173           58 SFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFA  137 (359)
Q Consensus        58 ~~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~  137 (359)
                      ...++|+|||.+.+..  ++..-+.+..++|+|+|||+|||+.|+.+++.+++..+...+. .....+..|+.+.  ||.
T Consensus        52 ~~~~~g~~vG~~~~~~--~~~~~~~~~~~~V~P~~R~~GiG~~Ll~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~--~~~  126 (308)
T d1p0ha_          52 GSRPGGPIIGYLNLSP--PRGAGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAH-GTLDPARATASAL--GLV  126 (308)
T ss_dssp             CSSTTCCEEEEEEEEC--C---CCCEEEEEECGGGCSSSHHHHHHHHHHHHTTTCCEEEEG-GGCHHHHHHHHHT--TCE
T ss_pred             EEecCCEEEEEEEEEe--cCCCceeEEEEEECHHHhcCCHHHHHHHHHHHHHhhhccceec-ccchhhHHHHHhc--ccc
Confidence            3458899999887543  3334467889999999999999999999999988876654432 2223578999999  999


Q ss_pred             EEEe
Q 048173          138 SVAE  141 (359)
Q Consensus       138 ~~~e  141 (359)
                      ....
T Consensus       127 ~~~~  130 (308)
T d1p0ha_         127 GVRE  130 (308)
T ss_dssp             EEEE
T ss_pred             cccc
Confidence            7654

>d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Autoinducer synthetase
domain: Autoinducer synthesis protein LasI
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.84  E-value=3.4e-05  Score=66.77  Aligned_cols=78  Identities=10%  Similarity=-0.029  Sum_probs=67.2

Q ss_pred             CCCCcEEEEEEeeecC-------------------CCCceeeeeEEEeccCccccC----hHHHHHHHHHHHHHHcCCcE
Q 048173           60 LNLGKVVAAVIYQIVP-------------------ADTQYAEVPLAAVSSIYQHKG----VGRLLYLKLRKRLQSVGIRT  116 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~-------------------~d~~~a~I~~~AV~~~~QgkG----IG~~Lv~~l~~~lk~~GI~~  116 (359)
                      .++|++||++++....                   .+....||.-|||++++++++    ++..|+.++.+.+.+.|++.
T Consensus        60 ~~~g~~vG~~Rl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~E~sR~aV~~~~r~~~r~~~~~~~L~~~~~~~a~~~G~~~  139 (197)
T d1ro5a_          60 QEDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQT  139 (197)
T ss_dssp             EETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCE
T ss_pred             ccccceEEEEEeecCCCCCcccccchhhhcCccccCCCceEEEEEEEEccccccccchhHHHHHHHHHHHHHHHHCCCCE
Confidence            3678999999986432                   244678999999999996554    88899999999999999999


Q ss_pred             EEEEeccccHHHHhhcccCcEEE
Q 048173          117 IFCWDDKESSFFFLKQVQDFASV  139 (359)
Q Consensus       117 I~l~a~~~A~~Fw~K~~~GF~~~  139 (359)
                      +++.+......||.+.  ||...
T Consensus       140 ~~~~~~~~~~r~~~r~--G~~~~  160 (197)
T d1ro5a_         140 LVTVTTVGVEKMMIRA--GLDVS  160 (197)
T ss_dssp             EEEEEEHHHHHHHHHT--TCEEE
T ss_pred             EEEEecHHHHHHHHHC--CCcEE
Confidence            9999999999999999  99764

>d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein AT1g77540
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.37  E-value=0.00014  Score=57.15  Aligned_cols=64  Identities=17%  Similarity=0.140  Sum_probs=46.8

Q ss_pred             EEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhc
Q 048173           67 AAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQ  132 (359)
Q Consensus        67 gvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~  132 (359)
                      |.+.+..... ++.-.|.|..|++++||||||+.|++++.+.+++.|. +|.-...-.+..|..|+
T Consensus        20 a~~~y~~~~~-~~~i~i~HT~V~~~~rGqGia~~Lv~~al~~ar~~g~-kV~P~Cpyv~~~~~~kh   83 (95)
T d1xmta_          20 AFIEYKMRNN-GKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSI-SIIPSCSYVSDTFLPRN   83 (95)
T ss_dssp             SEEEEEEETT-TTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTC-EEEECSHHHHHTHHHHC
T ss_pred             EEEEEEEeCC-CcEEEEEEEEeCcccCCChHHHHHHHHHHHHHHHCCC-EEEEeCHHHHHHHHHhC
Confidence            4444433333 3444599999999999999999999999999999997 55544443334566666

>d1l7ba_ c.15.1.2 (A:) NAD+-dependent DNA ligase, domain 4 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: DNA ligase
domain: NAD+-dependent DNA ligase, domain 4
species: Thermus thermophilus [TaxId: 274]

Probab=97.31  E-value=0.00013  Score=57.08  Aligned_cols=79  Identities=11%  Similarity=0.008  Sum_probs=59.1

Q ss_pred             CCCCceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCC
Q 048173          248 PNGKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV  321 (359)
Q Consensus       248 ~~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~fl  321 (359)
                      .+-.+.+|+|||.-..  ....++|+.+||.|+++ ..++||||++... +-|+-.|.-   .||+.+|+.+.+++..--
T Consensus         6 ~~l~G~~iv~TG~~~~~R~e~~~~i~~~Gg~v~~sVs~~t~~LV~g~~~-g~K~~kA~~~gI~IisE~~f~~~l~~~~~~   84 (92)
T d1l7ba_           6 EALKGLTFVITGELSRPREEVKALLRRLGAKVTDSVSRKTSYLVVGENP-GSKLEKARALGVPTLTEEELYRLLEARTGK   84 (92)
T ss_dssp             CSSTTCEEECSTTTTSCHHHHHHHHHHTTCEEESCCSSSCCCBEECSSS-STTHHHHHCSSSCCEEHHHHHHHHHHHHCS
T ss_pred             CCcCCCEEEEeCCccCCHHHHHHHHHHhCCEEcCccccceeEEEECCCC-CcHHHHHHHcCCcEecHHHHHHHHHhCCCC
Confidence            3446778999998643  23357889999999999 7789999998643 346666665   999999999999875554


Q ss_pred             CCCcce
Q 048173          322 DESFYM  327 (359)
Q Consensus       322 DEe~Y~  327 (359)
                      +.++++
T Consensus        85 ~~~e~~   90 (92)
T d1l7ba_          85 KAEELV   90 (92)
T ss_dssp             CSSSCS
T ss_pred             CHHHHh
Confidence            555444

>d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: Autoinducer synthetase
domain: Acyl-homoserinelactone synthase EsaI
species: Pantoea stewartii subsp. stewartii [TaxId: 66271]

Probab=96.83  E-value=0.0011  Score=57.62  Aligned_cols=79  Identities=13%  Similarity=0.162  Sum_probs=66.3

Q ss_pred             CCCcEEEEEEeeecC-----------------CCCceeeeeEEEeccCcccc------ChHHHHHHHHHHHHHHcCCcEE
Q 048173           61 NLGKVVAAVIYQIVP-----------------ADTQYAEVPLAAVSSIYQHK------GVGRLLYLKLRKRLQSVGIRTI  117 (359)
Q Consensus        61 ~~g~IVgvi~l~i~~-----------------~d~~~a~I~~~AV~~~~Qgk------GIG~~Lv~~l~~~lk~~GI~~I  117 (359)
                      ++|++||++++.-..                 ......|+..|||++++++.      .+...|+.++.+.+.+.||+.+
T Consensus        59 ~~g~~vG~~Rllp~~~~~~l~~~f~~l~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~v~~~L~~~~~~~a~~~Gi~~~  138 (210)
T d1kzfa_          59 CEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVLFLAMVNWAQNNAYGNI  138 (210)
T ss_dssp             ETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSCEEEEEEEECHHHHHHHHCTTCCHHHHHHHHHHHHHHHTTCSEE
T ss_pred             cCCeEEEEEEecCCCCCcchhhcchhhccCCCCCCCeEEEEEEEeccccccccccccchHHHHHHHHHHHHHHHCCCCEE
Confidence            579999999974321                 13356899999999999875      3788999999999999999999


Q ss_pred             EEEeccccHHHHhhcccCcE--EEEe
Q 048173          118 FCWDDKESSFFFLKQVQDFA--SVAE  141 (359)
Q Consensus       118 ~l~a~~~A~~Fw~K~~~GF~--~~~e  141 (359)
                      +..+...-..+|.+.  ||.  .++.
T Consensus       139 ~~v~~~~~~r~~~r~--G~~~~~lg~  162 (210)
T d1kzfa_         139 YTIVSRAMLKILTRS--GWQIKVIKE  162 (210)
T ss_dssp             EEEEEHHHHHHHHHH--CCCCEEEEE
T ss_pred             EEEeCHHHHHHHHHC--CCCeEEcCC
Confidence            999999889999999  984  5554

>d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.73  E-value=0.011  Score=51.37  Aligned_cols=62  Identities=16%  Similarity=0.205  Sum_probs=50.3

Q ss_pred             cCCCCcEEEEEEeeec-----CCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC-cEEEEE
Q 048173           59 FLNLGKVVAAVIYQIV-----PADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI-RTIFCW  120 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~-----~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI-~~I~l~  120 (359)
                      ..+++++||.|.....     ...-..+||-+++||.++|.||++-.|++|+-.++...|| ..|+.-
T Consensus       106 ~~~~~KLvg~Is~~P~~i~i~~~~~~~~~VnFLCVhkk~R~K~lAPvLI~EitRr~n~~~i~qavyt~  173 (185)
T d1iica1         106 VKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTA  173 (185)
T ss_dssp             ETTTCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EccCCcEEEEEeeeEEEEEEcCeEEEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhcccCeEEEEEec
Confidence            3478899999875322     2223679999999999999999999999999999999998 555553

>d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.011  Score=49.46  Aligned_cols=58  Identities=17%  Similarity=0.220  Sum_probs=48.5

Q ss_pred             CCCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 048173           60 LNLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI  117 (359)
Q Consensus        60 ~~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I  117 (359)
                      .+++++||.|.....--     .-..+||-+++||.++|.||++-.|++|+-.++...||=..
T Consensus        63 ~~~~kLVgfIs~~P~~i~i~~~~~~~~~InFLCVhKklR~k~lAPvLI~EitRr~n~~gI~qa  125 (141)
T d1rxta1          63 VSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQA  125 (141)
T ss_dssp             SSSSCEEEEECCEECCCCCSSSCCCCEECCCCEECSSCCCSSSHHHHHHHHHHHHTTTTCCCE
T ss_pred             ccCCeEEEEEeceEEEEEEeCCEeEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhhccCeEEE
Confidence            47899999998643322     33679999999999999999999999999999999997443

>d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Yeast (Candida albicans) [TaxId: 5476]

Probab=94.55  E-value=0.027  Score=48.16  Aligned_cols=59  Identities=17%  Similarity=0.268  Sum_probs=48.1

Q ss_pred             cCCCCcEEEEEEeeec-----CCCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 048173           59 FLNLGKVVAAVIYQIV-----PADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI  117 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~-----~~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I  117 (359)
                      ..+++++||.|.....     ..+.  ..+||-+++||..+|.||++-.|++|+-.++...||=..
T Consensus        84 ~~~~~kLvgfIs~~P~~i~i~~~~~~~~~~~INFLCVhKklR~KrlAPvLI~EitRr~n~~gI~qA  149 (165)
T d1iyka1          84 VKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQA  149 (165)
T ss_dssp             ETTTCCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCE
T ss_pred             EccCCcEEEEEecceEEEEEecCCcEEEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhhccCeEEE
Confidence            3478899999876532     1232  559999999999999999999999999999999997443

>d1kzyc2 c.15.1.4 (C:1867-1972) 53BP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: 53BP1
domain: 53BP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.036  Score=44.23  Aligned_cols=78  Identities=14%  Similarity=0.044  Sum_probs=54.7

Q ss_pred             CCCceEEEEcccCcc---hHHHHHHHhcCcEEecC-----------CCCeeEEEeCCC--CCcHHHHhhcc-cccCHHHH
Q 048173          249 NGKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-----------GITSTHVVAGKV--RKTLNFFTALS-WIVSPSWL  311 (359)
Q Consensus       249 ~~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-----------~~~~THLVa~~~--~RT~KfL~AIa-wIVsp~WL  311 (359)
                      +-+..||++.+-.++   +....+++..|+.++..           ...|+.+|++.-  .-++|...++. .|||++|+
T Consensus         2 pF~~l~vl~vs~~~~~F~e~Ws~IL~~~Ga~vV~~~~~~~~~sd~~~~~~DVvvTD~scp~~vl~~a~~~~ipvVS~EWV   81 (106)
T d1kzyc2           2 PFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQEWV   81 (106)
T ss_dssp             TTTTCEEEEEESCTTTTHHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTCCEECHHHH
T ss_pred             CCcceEEEEEecccccHHHHHHHHHHhCCceEeeccccchhhccCccccccEEEeCCCCCHHHHHHHHHcCCcEeeHHHH
Confidence            345678887443332   23357788889866431           347899999864  34555555555 99999999


Q ss_pred             HHHHhCCCCCCCCcc
Q 048173          312 KESFGEGRFVDESFY  326 (359)
Q Consensus       312 ~eS~k~g~flDEe~Y  326 (359)
                      .+|+=.|+.++-+.+
T Consensus        82 IQsLI~G~~~~~dsH   96 (106)
T d1kzyc2          82 IQCLIVGERIGFKQH   96 (106)
T ss_dssp             HHHHHHTSCCCTTSS
T ss_pred             HHHHHccCcCCCCCC
Confidence            999999999987654

>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: BRCT domain
superfamily: BRCT domain
family: BRCT domain
domain: Breast cancer associated protein, BRCA1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.84  E-value=0.13  Score=40.32  Aligned_cols=71  Identities=14%  Similarity=0.152  Sum_probs=43.6

Q ss_pred             EcccCcchHHHHHHHhcCcEEecCCCC------eeEEEeCC--C---CCcHHHHhhcc--cccCHHHHHHHHhCCCCCCC
Q 048173          257 LMNIADDSKKVHLTKNLRGAVTSDGIT------STHVVAGK--V---RKTLNFFTALS--WIVSPSWLKESFGEGRFVDE  323 (359)
Q Consensus       257 fSgl~~e~kk~klik~LGG~V~~d~~~------~THLVa~~--~---~RT~KfL~AIa--wIVsp~WL~eS~k~g~flDE  323 (359)
                      ||+++- +....+++-.|+.|+++.+.      .+-||.-.  .   .+...-+.+.+  .+|+.+|+.||.+.=+..+-
T Consensus        13 Ft~mt~-d~Le~mv~lCGAsVvk~~~~l~~~~~~~~viVvqpda~t~~~~~~~i~~~~~~~vVtreWvLDSIA~Y~~Q~l   91 (97)
T d1l0ba2          13 FTNMPK-DELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVMWDWVLDSISVYRCRDL   91 (97)
T ss_dssp             CSSSCH-HHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------CEEETHHHHHHHHTTSCCCG
T ss_pred             ccCCCH-HHHHHHHHHcCceeecChhhcCCCCCCeeEEEEcCCccccccccHHHHHhccccEEehhHhhhhhhheeeeeh
Confidence            566665 34457889999999987322      22233322  1   23333333333  89999999999999999988


Q ss_pred             Cccee
Q 048173          324 SFYML  328 (359)
Q Consensus       324 e~Y~L  328 (359)
                      +.|++
T Consensus        92 ~~YL~   96 (97)
T d1l0ba2          92 DAYLV   96 (97)
T ss_dssp             GGGBC
T ss_pred             Hhhhc
Confidence            88865

>d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: FemXAB nonribosomal peptidyltransferases
domain: Methicillin resistance protein FemA
species: Staphylococcus aureus [TaxId: 1280]

Probab=88.45  E-value=0.45  Score=38.65  Aligned_cols=60  Identities=12%  Similarity=0.024  Sum_probs=50.0

Q ss_pred             cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEe
Q 048173           59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWD  121 (359)
Q Consensus        59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a  121 (359)
                      +-.+|++||++++...+   +.++..+.+.+++++..+.+..|+-++.+.+++.|++..-+.+
T Consensus        76 a~~~~~~ia~~l~~~~~---~~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G~~~~D~gG  135 (182)
T d1lrza3          76 AYINELPISAGFFFINP---FEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYG  135 (182)
T ss_dssp             EEEEEEEEEEEEEEECS---SCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             eecCCccEEEEEEEeec---hhheeeeceeccchhhcCchHHHHHHHHHHHHHcCCcEEEecC
Confidence            34788999987754333   3476778899999999999999999999999999999987765

>d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Histone acetyltransferase HAT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.40  E-value=1.1  Score=41.27  Aligned_cols=41  Identities=24%  Similarity=0.289  Sum_probs=33.3

Q ss_pred             CCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEE
Q 048173           77 DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTI  117 (359)
Q Consensus        77 d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I  117 (359)
                      +..+.-|-+|.|-|-|||+|+|+.|++.+-+.+.. .++..|
T Consensus       206 ~~~R~RISQ~LILPPyQ~kG~G~~L~~~iy~~~~~d~~v~ei  247 (315)
T d1boba_         206 KKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEI  247 (315)
T ss_dssp             CCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             ccccceeEEEEEeCccccCCchHHHHHHHHHHHhcCCCeeec
Confidence            44567799999999999999999999999877765 444443