Citrus Sinensis ID: 048276

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MAFTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPVISTSDPDASSPMDANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPTV
ccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccEEccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEccccccccccccccccccccccccEEEEEEEEccccccccEEEEEcccccccccccEEEEEccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccEEEEccHccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEHHHHcccccccEccccccHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcccccccHHHcccHHHHHHHHHHHccEEEcccccccccccccccccccHHccccEcccEEEEEccccHHHHHHHHHHccEEEEEccccHHHHcccccEEccEccccccccEEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEcccccHHHHHHcccccEEEcc
MAFTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFAdltndefrsmyagydwqnqnspvistsdpdasspmdanstvtdvpssmdsrengavtpvkdqgdcnccwafssvAAVEGITKIetgklmslseqelvdcdtgsfdrgctvgrMDTAFEFiknnngltteadypfvgndygackttkdendaaaatisgfkfvpannEQALMQVVAdqpvsvsidssgymFQFYssgiikseecgtdidhgvtaigygassdgtKYWLVKnswgtgwgeggyVRIQREVGAQEGACGIammasyptv
MAFTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPVISTSDPDASSPMDANSTvtdvpssmdsRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIEtgklmslseqELVDCDTGSFDRGCTVGRMDTAFEFIKnnngltteadypFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPTV
MAFTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPVISTSDPDASSPMDANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPTV
**FTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFADLTNDEFRSMYAGYDWQ********************************************QGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMM******
******CQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFADLTNDEFRSMYAGY**********************ANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPTV
MAFTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPV*******************************AVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPTV
*AFTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFADLTNDEFRSMYAGYD********************DANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPTV
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAFTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQYRGYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPVISTSDPDASSPMDANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPTV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query345 2.2.26 [Sep-21-2011]
P43156360 Thiol protease SEN102 OS= N/A no 0.933 0.894 0.484 3e-80
Q9FGR9361 KDEL-tailed cysteine endo no no 0.863 0.825 0.487 7e-79
Q9STL5364 KDEL-tailed cysteine endo no no 0.866 0.821 0.490 7e-79
Q9STL4361 KDEL-tailed cysteine endo no no 0.860 0.822 0.477 3e-77
O65039360 Vignain OS=Ricinus commun N/A no 0.857 0.822 0.484 8e-77
P25803362 Vignain OS=Phaseolus vulg N/A no 0.855 0.814 0.482 2e-76
P12412362 Vignain OS=Vigna mungo PE N/A no 0.855 0.814 0.482 5e-76
O65493355 Xylem cysteine proteinase no no 0.843 0.819 0.459 3e-74
P25250373 Cysteine proteinase EP-B N/A no 0.860 0.796 0.465 3e-73
P25249371 Cysteine proteinase EP-B N/A no 0.869 0.808 0.461 1e-72
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1 Back     alignment and function desciption
 Score =  298 bits (764), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 170/351 (48%), Positives = 222/351 (63%), Gaps = 29/351 (8%)

Query: 10  FCLVSLLVMYFWAIHALCRPIGEKLI-----MLKMHEQWMAQHGLVYADEAEKAETAYDF 64
           F  ++L+ + F +I A   P  EK +     +  ++E+W   H  V  D  EK      F
Sbjct: 6   FIALALVALSFLSI-AQSIPFTEKDLASEDSLWNLYEKWRTHH-TVARDLDEKNRRFNVF 63

Query: 65  RRQYR-----------GYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPVISTSDPDASSP 113
           +   +            YKLA+NKF D+TN EFRS YAG   Q+  S        +  S 
Sbjct: 64  KENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQ--RGIQKNTGSF 121

Query: 114 MDANSTVTDVPS-SMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSE 172
           M  N  V  +P+ S+D R  GAVT VKDQG C  CWAFS++A+VEGI +I+TG+L+SLSE
Sbjct: 122 MYEN--VGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSE 179

Query: 173 QELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAA 232
           QELVDCDT S++ GC  G MD AFEFI+ N G+TTE  YP+   D G C +  +  ++  
Sbjct: 180 QELVDCDT-SYNEGCNGGLMDYAFEFIQKN-GITTEDSYPYAEQD-GTCAS--NLLNSPV 234

Query: 233 ATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTA 292
            +I G + VPANNE ALMQ VA+QP+SVSI++SGY FQFYS G+  +  CGT++DHGV  
Sbjct: 235 VSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVF-TGRCGTELDHGVAI 293

Query: 293 IGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYP 343
           +GYGA+ DGTKYW+VKNSWG  WGE GY+R+QR +  + G CGIAM ASYP
Sbjct: 294 VGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGIAMEASYP 344

Hemerocallis sp. (taxid: 29711)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9STL5|CEP3_ARATH KDEL-tailed cysteine endopeptidase CEP3 OS=Arabidopsis thaliana GN=CEP3 PE=2 SV=1 Back     alignment and function description
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function description
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function description
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function description
>sp|P25250|CYSP2_HORVU Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1 Back     alignment and function description
>sp|P25249|CYSP1_HORVU Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
255564908342 cysteine protease, putative [Ricinus com 0.927 0.935 0.569 7e-99
224076972307 predicted protein [Populus trichocarpa] 0.855 0.960 0.568 3e-97
147788834341 hypothetical protein VITISV_005140 [Viti 0.956 0.967 0.519 4e-97
359485281341 PREDICTED: LOW QUALITY PROTEIN: KDEL-tai 0.956 0.967 0.528 9e-97
224076970340 predicted protein [Populus trichocarpa] 0.918 0.932 0.534 2e-96
47524507344 putative cysteine protease [Gossypium hi 0.950 0.953 0.517 2e-96
255564910341 cysteine protease, putative [Ricinus com 0.924 0.935 0.555 2e-96
225446583341 PREDICTED: KDEL-tailed cysteine endopept 0.956 0.967 0.525 3e-96
225446581341 PREDICTED: vignain [Vitis vinifera] 0.956 0.967 0.525 4e-96
224081320340 predicted protein [Populus trichocarpa] 0.942 0.955 0.522 8e-96
>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis] gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  366 bits (940), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 196/344 (56%), Positives = 241/344 (70%), Gaps = 24/344 (6%)

Query: 12  LVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQY--- 68
            V+LLV+  WA  A  R + +   M + HE WMA++G VY D +EK      FR      
Sbjct: 11  FVALLVVGLWASQAWSRSLHDA-AMNERHEMWMAKYGRVYKDNSEKERRFEIFRNNVEFI 69

Query: 69  --------RGYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPVISTSDPDASSPMDANSTV 120
                   R YKL +N+FADLTN+EF+    GY    ++S V  T   + SS   AN  V
Sbjct: 70  ESFNKLGNRPYKLDINEFADLTNEEFKVSKNGY---KRSSGVGLT---EKSSFRYAN--V 121

Query: 121 TDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDT 180
           T VP+SMD R+NGAVTP+KDQG C CCWAFS+VAA+EGITK+ TGKL+SLSEQELVDCDT
Sbjct: 122 TAVPTSMDWRQNGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDT 181

Query: 181 GSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKF 240
              D+GC  G MD AFEFIK N GLTTEA+YP+ G D G C T K  ND  AA I+G++ 
Sbjct: 182 SGEDQGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTD-GTCNTNKAGND--AAKITGYED 238

Query: 241 VPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSD 300
           VPAN+E AL++ VA QPVSV+ID+SG  FQFYS G+  + +CGT++DHGVTA+GYG S D
Sbjct: 239 VPANSEDALLKAVASQPVSVAIDASGSAFQFYSGGVF-TGDCGTELDHGVTAVGYGTSDD 297

Query: 301 GTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPT 344
           GTKYWLVKNSWGT WGE GY+R++R++ A+EG CGIAM  SYPT
Sbjct: 298 GTKYWLVKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQPSYPT 341

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224076972|ref|XP_002305074.1| predicted protein [Populus trichocarpa] gi|224106329|ref|XP_002333698.1| predicted protein [Populus trichocarpa] gi|222837984|gb|EEE76349.1| predicted protein [Populus trichocarpa] gi|222848038|gb|EEE85585.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147788834|emb|CAN64655.1| hypothetical protein VITISV_005140 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485281|ref|XP_002280230.2| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224076970|ref|XP_002305073.1| predicted protein [Populus trichocarpa] gi|222848037|gb|EEE85584.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|47524507|gb|AAT34987.1| putative cysteine protease [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis] gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446581|ref|XP_002280246.1| PREDICTED: vignain [Vitis vinifera] Back     alignment and taxonomy information
>gi|224081320|ref|XP_002306369.1| predicted protein [Populus trichocarpa] gi|222855818|gb|EEE93365.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.965 0.962 0.502 1.1e-87
TAIR|locus:505006391364 CEP3 "cysteine endopeptidase 3 0.866 0.821 0.490 2.5e-74
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.881 0.873 0.471 2.5e-74
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.857 0.819 0.496 4e-74
TAIR|locus:2038515343 AT1G06260 [Arabidopsis thalian 0.823 0.827 0.478 1.2e-72
TAIR|locus:2055440345 AT2G34080 [Arabidopsis thalian 0.933 0.933 0.452 3.2e-72
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.855 0.830 0.468 3.7e-71
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.860 0.870 0.465 1.6e-70
TAIR|locus:2167821 463 RD21B "esponsive to dehydratio 0.843 0.628 0.468 3.3e-70
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.936 0.909 0.451 1.1e-69
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
 Identities = 180/358 (50%), Positives = 238/358 (66%)

Query:     1 MAFTNICQYFCLVSLLVMYFWAIHALCRPIGEKLIMLKMHEQWMAQHGLVYADEAEKAET 60
             MA  ++ Q F  V++   + ++I  L RP+  +LIM K H +WM +HG VYAD  E+   
Sbjct:     1 MALKHM-QIFLFVAIFSSFCFSI-TLSRPLDNELIMQKRHIEWMTKHGRVYADVKEENNR 58

Query:    61 AYDFRRQY------------RGYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPVISTSDP 108
                F+               R +KLAVN+FADLTNDEFRSMY G+    +    +S+   
Sbjct:    59 YVVFKNNVERIEHLNSIPAGRTFKLAVNQFADLTNDEFRSMYTGF----KGVSALSSQSQ 114

Query:   109 DASSPMD-ANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKL 167
                SP    N +   +P S+D R+ GAVTP+K+QG C CCWAFS+VAA+EG T+I+ GKL
Sbjct:   115 TKMSPFRYQNVSSGALPVSVDWRKKGAVTPIKNQGSCGCCWAFSAVAAIEGATQIKKGKL 174

Query:   168 MSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDE 227
             +SLSEQ+LVDCDT  F  GC  G MDTAFE IK   GLTTE++YP+ G D   C + K  
Sbjct:   175 ISLSEQQLVDCDTNDF--GCEGGLMDTAFEHIKATGGLTTESNYPYKGED-ATCNSKK-- 229

Query:   228 NDAAAATISGFKFVPANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDID 287
              +  A +I+G++ VP N+EQALM+ VA QPVSV I+  G+ FQFYSSG+   E C T +D
Sbjct:   230 TNPKATSITGYEDVPVNDEQALMKAVAHQPVSVGIEGGGFDFQFYSSGVFTGE-CTTYLD 288

Query:   288 HGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPTV 345
             H VTAIGYG S++G+KYW++KNSWGT WGE GY+RIQ++V  ++G CG+AM ASYPT+
Sbjct:   289 HAVTAIGYGESTNGSKYWIIKNSWGTKWGESGYMRIQKDVKDKQGLCGLAMKASYPTI 346
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
GO:0009723 "response to ethylene stimulus" evidence=IEP
GO:0007568 "aging" evidence=IEP;TAS
GO:0010150 "leaf senescence" evidence=IEP;TAS
GO:0010282 "senescence-associated vacuole" evidence=IDA
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IEP
TAIR|locus:505006391 CEP3 "cysteine endopeptidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038515 AT1G06260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055440 AT2G34080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5E998CATL2_BOVIN3, ., 4, ., 2, 2, ., 4, 30.40550.83180.8592yesno
P06797CATL1_MOUSE3, ., 4, ., 2, 2, ., 1, 50.38640.87240.9011yesno
Q9GL24CATL1_CANFA3, ., 4, ., 2, 2, ., 1, 50.40490.82890.8588yesno
Q28944CATL1_PIG3, ., 4, ., 2, 2, ., 1, 50.41610.82890.8562yesno
O60911CATL2_HUMAN3, ., 4, ., 2, 2, ., 4, 30.40370.82890.8562yesno
P25975CATL1_BOVIN3, ., 4, ., 2, 2, ., 1, 50.40860.83180.8592yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-107
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 2e-94
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 1e-77
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 4e-58
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 4e-48
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 2e-47
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 2e-31
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 1e-30
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 8e-27
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 2e-26
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 1e-14
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 9e-12
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 5e-09
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 1e-08
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-08
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 2e-07
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  311 bits (798), Expect = e-107
 Identities = 119/223 (53%), Positives = 146/223 (65%), Gaps = 11/223 (4%)

Query: 123 VPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGS 182
           +P S D RE GAVTPVKDQG C  CWAFS+V A+EG   I+TGKL+SLSEQ+LVDCDTG+
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTGN 60

Query: 183 FDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVP 242
              GC  G  D AFE+IK N G+ TE+DYP+  +D G CK  K  +    A I G+  VP
Sbjct: 61  N--GCNGGLPDNAFEYIKKNGGIVTESDYPYTAHD-GTCKFKKSNS--KYAKIKGYGDVP 115

Query: 243 ANNEQALMQ-VVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDG 301
            N+E+AL   +  + PVSV+ID+    FQ Y SG+ K  EC  ++DH V  +GYG + +G
Sbjct: 116 YNDEEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYG-TENG 174

Query: 302 TKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYPT 344
             YW+VKNSWGT WGE GY RI R V      CGIA  ASYP 
Sbjct: 175 VPYWIVKNSWGTDWGENGYFRIARGV----NECGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 345
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.91
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.72
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.44
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.18
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 98.83
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.78
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 95.99
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 93.52
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 88.91
PF09778212 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP 84.98
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=5.6e-81  Score=562.93  Aligned_cols=291  Identities=40%  Similarity=0.709  Sum_probs=254.2

Q ss_pred             HHHHHHHHHHHHHhCCccCCHHHHHHHHHHHhhc-----------CCceeeecccCCCCCHHHHHhHhcccccCCCCCCC
Q 048276           34 LIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQ-----------YRGYKLAVNKFADLTNDEFRSMYAGYDWQNQNSPV  102 (345)
Q Consensus        34 ~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~n-----------~~~~~~g~N~fsDlt~eE~~~~~~~~~~~~~~~~~  102 (345)
                      ...++.|..|+.+|+|+|.+.+|...|+.||++|           ..|.+.|+|+|||||+|||++++++.+   .. ..
T Consensus        65 l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~---~~-~~  140 (372)
T KOG1542|consen   65 LGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVK---RR-GS  140 (372)
T ss_pred             cchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccc---cc-cc
Confidence            3457889999999999999999999999999998           358999999999999999999998766   32 11


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCceecccCCCCCccccCCCCcchHHHHHHHHHHHHHHHhcCCCCcCChhHhhhcCCCC
Q 048276          103 ISTSDPDASSPMDANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGS  182 (345)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cgsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~  182 (345)
                      ..+.   ...... ......||++||||++|.||||||||+||||||||+++++|+++.|+++++++||||+|+||+.. 
T Consensus       141 ~~~~---~~~~~~-~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~-  215 (372)
T KOG1542|consen  141 KLPG---DAAEAP-IEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSC-  215 (372)
T ss_pred             cCcc---ccccCc-CCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCc-
Confidence            1001   011111 13345899999999999999999999999999999999999999999999999999999999975 


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCCCcccccCCCCCCCCCCcccCCCcceEeeeeEEccCChHHHHHHHHh-CCCeEEE
Q 048276          183 FDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVA-DQPVSVS  261 (345)
Q Consensus       183 ~~~gc~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~c~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV~v~  261 (345)
                       +.||+||.+..|++|+++.+|+..|.+|||++..-..|...   .....+.|++|..++ .|+++|.+.|. +|||+|+
T Consensus       216 -d~gC~GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~---~~~~~v~I~~f~~l~-~nE~~ia~wLv~~GPi~vg  290 (372)
T KOG1542|consen  216 -DNGCNGGLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFD---KSKIVVSIKDFSMLS-NNEDQIAAWLVTFGPLSVG  290 (372)
T ss_pred             -CCcCCCCChhHHHHHHHHhCCccccccCCccccCCCccccc---hhhceEEEeccEecC-CCHHHHHHHHHhcCCeEEE
Confidence             89999999999999988888999999999999983399988   467789999999998 58999988887 9999999


Q ss_pred             EecCCccccccccCeecC--CCCCCC-CCeEEEEEEecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCccccc
Q 048276          262 IDSSGYMFQFYSSGIIKS--EECGTD-IDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAM  338 (345)
Q Consensus       262 ~~~~~~~f~~y~~Gi~~~--~~~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~Cgi~~  338 (345)
                      |++.  .+|.|.+||..+  ..|+.. ++|+|+|||||.+...++|||||||||++|||+||+||.||.|    .|||++
T Consensus       291 iNa~--~mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N----~CGi~~  364 (372)
T KOG1542|consen  291 INAK--PMQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGSN----ACGIAD  364 (372)
T ss_pred             EchH--HHHHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEecccc----cccccc
Confidence            9975  899999999988  568855 8999999999998438999999999999999999999999974    599999


Q ss_pred             ccceec
Q 048276          339 MASYPT  344 (345)
Q Consensus       339 ~~~yp~  344 (345)
                      +++-+.
T Consensus       365 mvss~~  370 (372)
T KOG1542|consen  365 MVSSAA  370 (372)
T ss_pred             chhhhh
Confidence            987664

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 2e-69
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 6e-68
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 1e-59
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 3e-59
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 3e-58
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 3e-56
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 2e-55
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 2e-54
1pci_A322 Procaricain Length = 322 3e-54
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 2e-53
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 5e-53
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 1e-52
2act_A220 Crystallographic Refinement Of The Structure Of Act 4e-52
3hwn_A258 Cathepsin L With Az13010160 Length = 258 5e-52
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 5e-52
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 8e-52
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 3e-51
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 4e-51
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 9e-51
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 1e-50
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 2e-50
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 1e-49
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 1e-49
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 3e-49
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 3e-49
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 4e-49
3of8_A221 Structural Basis For Reversible And Irreversible In 4e-49
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 5e-49
3h89_A220 A Combined Crystallographic And Molecular Dynamics 5e-49
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 7e-49
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 2e-48
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 3e-48
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 4e-48
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 6e-48
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 6e-48
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 7e-48
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 9e-48
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 1e-47
1ppo_A216 Determination Of The Structure Of Papaya Protease O 1e-47
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 1e-47
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 3e-47
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 7e-47
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 1e-46
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 1e-46
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 1e-46
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 2e-46
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 2e-46
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 2e-46
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 3e-46
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 3e-46
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 2e-45
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 2e-45
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 2e-45
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 2e-45
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 4e-45
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 5e-45
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 9e-45
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 1e-44
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 2e-44
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 2e-44
2vhs_A217 Cathsilicatein, A Chimera Length = 217 5e-44
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 6e-44
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 4e-43
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 5e-41
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 1e-40
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 8e-39
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 2e-36
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 5e-34
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 7e-34
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 7e-34
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 4e-33
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 4e-33
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 8e-33
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 2e-31
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 3e-30
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 3e-30
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 5e-29
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 6e-24
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 2e-22
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 3e-21
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 3e-21
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 4e-20
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 7e-20
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 7e-18
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 1e-12
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 2e-12
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 2e-12
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 2e-12
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 3e-12
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 7e-12
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 2e-11
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 2e-11
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 3e-11
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 4e-11
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 5e-11
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 5e-11
1mir_A322 Rat Procathepsin B Length = 322 3e-10
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 1e-09
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 2e-09
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 6e-09
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 6e-09
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 7e-09
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 8e-09
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 6e-08
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 9e-07
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 1e-06
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 2e-05
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 129/221 (58%), Positives = 164/221 (74%), Gaps = 5/221 (2%)
Query: 123 VPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGS 182
           VP+S+D R+ GAVT VKDQG C  CWAFS++ AVEGI +I+T KL+SLSEQELVDCDT  
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQ 61
Query: 183 FDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVP 242
            ++GC  G MD AFEFIK   G+TTEA+YP+   D G C  +K+  +A A +I G + VP
Sbjct: 62  -NQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD-GTCDVSKE--NAPAVSIDGHENVP 117
Query: 243 ANNEQALMQVVADQPVSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGT 302
            N+E AL++ VA+QPVSV+ID+ G  FQFYS G+  +  CGT++DHGV  +GYG + DGT
Sbjct: 118 ENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVF-TGSCGTELDHGVAIVGYGTTIDGT 176
Query: 303 KYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIAMMASYP 343
           KYW VKNSWG  WGE GY+R++R +  +EG CGIAM ASYP
Sbjct: 177 KYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYP 217
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-149
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-142
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-141
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-141
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-137
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-137
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-136
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-134
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-129
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-129
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-128
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-126
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-126
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-126
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-126
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-125
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-124
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-124
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-124
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-123
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-120
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-120
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-119
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-117
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-116
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-115
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-114
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-114
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-113
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-110
3u8e_A222 Papain-like cysteine protease; papain-like cystein 1e-98
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 2e-96
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 2e-95
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 1e-85
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 6e-81
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 5e-77
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 1e-74
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 2e-67
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 3e-63
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 3e-17
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 2e-10
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 1e-06
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 1e-05
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  420 bits (1083), Expect = e-149
 Identities = 126/324 (38%), Positives = 167/324 (51%), Gaps = 36/324 (11%)

Query: 36  MLKMHEQWMAQHGLVYADEAEKAETAYDFRRQ---------------YRGYKLAVNKFAD 80
           ++++   WM  H   Y +  EK      +R +                  Y L +N+FAD
Sbjct: 18  LIQLFNSWMLNHNKFYENVDEKL-----YRFEIFKDNLNYIDETNKKNNSYWLGLNEFAD 72

Query: 81  LTNDEFRSMYAGYDWQNQNSPVISTSDPDASSPMDANSTVTDVPSSMDSRENGAVTPVKD 140
           L+NDEF   Y G         +I  +   +      N  + ++P ++D R+ GAVTPV+ 
Sbjct: 73  LSNDEFNEKYVGS--------LIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRH 124

Query: 141 QGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIK 200
           QG C  CWAFS+VA VEGI KI TGKL+ LSEQELVDC+      GC  G    A E++ 
Sbjct: 125 QGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR--SHGCKGGYPPYALEYVA 182

Query: 201 NNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQPVSV 260
             NG+   + YP+     G C+  +          SG   V  NNE  L+  +A QPVSV
Sbjct: 183 -KNGIHLRSKYPYKAKQ-GTCRAKQV--GGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSV 238

Query: 261 SIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGY 320
            ++S G  FQ Y  GI     CGT +D  VTA+GYG  S G  Y L+KNSWGT WGE GY
Sbjct: 239 VVESKGRPFQLYKGGIF-EGPCGTKVDGAVTAVGYG-KSGGKGYILIKNSWGTAWGEKGY 296

Query: 321 VRIQREVGAQEGACGIAMMASYPT 344
           +RI+R  G   G CG+   + YPT
Sbjct: 297 IRIKRAPGNSPGVCGLYKSSYYPT 320
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.6
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.49
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.05
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 96.96
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 96.93
3erv_A236 Putative C39-like peptidase; structural genomics, 86.75
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=1.7e-82  Score=600.70  Aligned_cols=298  Identities=38%  Similarity=0.722  Sum_probs=259.0

Q ss_pred             CCCchhHHHHHHHHHHHHHhCCccCCHHHHHHHHHHHhhc----------CCceeeecccCCCCCHHHHHhHhcccccCC
Q 048276           28 RPIGEKLIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQ----------YRGYKLAVNKFADLTNDEFRSMYAGYDWQN   97 (345)
Q Consensus        28 ~~~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~n----------~~~~~~g~N~fsDlt~eE~~~~~~~~~~~~   97 (345)
                      ..+.+++.+.++|++||++|+|+|.+.+|+.+|++||++|          +.+|++|+|+|+|||.+||++++++..   
T Consensus        54 ~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~~~~~~~~---  130 (363)
T 3tnx_A           54 NDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSI---  130 (363)
T ss_dssp             CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHHHHHSCSS---
T ss_pred             hhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHHHHhcccc---
Confidence            4455668899999999999999999999999999999998          578999999999999999999988765   


Q ss_pred             CCCCCccCCCCCCCCCCCCCCCCCCCCCceecccCCCCCccccCCCCcchHHHHHHHHHHHHHHHhcCCCCcCChhHhhh
Q 048276           98 QNSPVISTSDPDASSPMDANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVD  177 (345)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cgsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~d  177 (345)
                      ....... ..  ...... .....+||++||||++|.||||||||.||||||||++++||++++++++..+.||+|+|+|
T Consensus       131 ~~~~~~~-~~--~~~~~~-~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~Lvd  206 (363)
T 3tnx_A          131 AGNYTTT-EL--SYEEVL-NDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLD  206 (363)
T ss_dssp             CSCCCCS-SS--SSSCCC-CCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHH
T ss_pred             ccccccc-cc--cccccc-CcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhc
Confidence            3211110 00  011111 2223479999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCChHHHHHHHHHcCCCCCCCcccccCCCCCCCCCCcccCCCcceEeeeeEEccCChHHHHHHHHhCCC
Q 048276          178 CDTGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQP  257 (345)
Q Consensus       178 c~~~~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~c~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gP  257 (345)
                      |+..  +.||+||.+..|+.|+.++ |+++|++|||.+.+ +.|....  ......++.++..++..++..++.+|++||
T Consensus       207 C~~~--~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~-~~c~~~~--~~~~~~~~~~~~~~~~~~e~~l~~~v~~gP  280 (363)
T 3tnx_A          207 CDRR--SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQ-RYCRSRE--KGPYAAKTDGVRQVQPYNEGALLYSIANQP  280 (363)
T ss_dssp             HCTT--SCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSC-CCCCGGG--GCSCSBCCCEEEEECSSCHHHHHHHHTTSC
T ss_pred             ccCC--CCCCCCCChHHHHhHHHhc-CccccccCCCcCcC-CCcccCC--CCCceeeccceEEcchhhHHHHHHHHHcCC
Confidence            9875  7899999999999999986 99999999999988 7676543  344556778888888888999999999999


Q ss_pred             eEEEEecCCccccccccCeecCCCCCCCCCeEEEEEEecccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccc
Q 048276          258 VSVSIDSSGYMFQFYSSGIIKSEECGTDIDHGVTAIGYGASSDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGACGIA  337 (345)
Q Consensus       258 V~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~Cgi~  337 (345)
                      |+|++++..++|++|++|||..+ |+..++|||+|||||+     +|||||||||++|||+|||||+|+.++..|+|||+
T Consensus       281 vsvai~a~~~~F~~Y~sGVy~~~-~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~  354 (363)
T 3tnx_A          281 VSVVLEAAGKDFQLYRGGIFVGP-CGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLY  354 (363)
T ss_dssp             EEEEECCCSHHHHTEEEEEECCC-CCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTT
T ss_pred             cEEEEEecchhhhCCCCCEECCC-CCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCcc
Confidence            99999987678999999999987 8888999999999986     49999999999999999999999998877899999


Q ss_pred             cccceec
Q 048276          338 MMASYPT  344 (345)
Q Consensus       338 ~~~~yp~  344 (345)
                      +.++||+
T Consensus       355 ~~a~yPi  361 (363)
T 3tnx_A          355 TSSFYPV  361 (363)
T ss_dssp             SCEEEEE
T ss_pred             ceeeecc
Confidence            9999997
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 345
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 1e-61
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 1e-58
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 2e-57
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 1e-55
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 4e-55
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1e-54
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 1e-54
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 2e-54
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 4e-54
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 2e-53
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 3e-53
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 7e-53
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 1e-52
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 2e-52
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 5e-52
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 2e-49
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 5e-49
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-46
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 5e-42
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 2e-41
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 4e-06
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 3e-04
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (501), Expect = 1e-61
 Identities = 118/323 (36%), Positives = 163/323 (50%), Gaps = 37/323 (11%)

Query: 41  EQWMAQHGLVYADEAEK-------------AETAYDFRRQYRGYKLAVNKFADLTNDEFR 87
            +W A H  +Y    E                   ++R     + +A+N F D+T++EFR
Sbjct: 13  TKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFR 72

Query: 88  SMYAGYDWQNQNSPVISTSDPDASSPMDANSTVTDVPSSMDSRENGAVTPVKDQGDCNCC 147
            +  G+  +      +                  + P S+D RE G VTPVK+QG C  C
Sbjct: 73  QVMNGFQNRKPRKGKVFQ-----------EPLFYEAPRSVDWREKGYVTPVKNQGQCGSC 121

Query: 148 WAFSSVAAVEGITKIETGKLMSLSEQELVDCDTGSFDRGCTVGRMDTAFEFIKNNNGLTT 207
           WAFS+  A+EG    +TG+L+SLSEQ LVDC     + GC  G MD AF+++++N GL +
Sbjct: 122 WAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDS 181

Query: 208 EADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVADQ-PVSVSIDSSG 266
           E  YP     Y A + +   N   +             E+ALM+ VA   P+SV+ID+  
Sbjct: 182 EESYP-----YEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGH 236

Query: 267 YMFQFYSSGIIKSEECGT-DIDHGVTAIGYGA---SSDGTKYWLVKNSWGTGWGEGGYVR 322
             F FY  GI    +C + D+DHGV  +GYG     SD  KYWLVKNSWG  WG GGYV+
Sbjct: 237 ESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK 296

Query: 323 IQREVGAQEGACGIAMMASYPTV 345
           + ++       CGIA  ASYPTV
Sbjct: 297 MAKDR---RNHCGIASAASYPTV 316
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.76
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.7
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 96.07
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 95.83
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-76  Score=555.48  Aligned_cols=292  Identities=41%  Similarity=0.786  Sum_probs=248.4

Q ss_pred             HHHHHHHHHHHHHhCCccCCHHHHHHHHHHHhhc--------------CCceeeecccCCCCCHHHHHhHhcccccCCCC
Q 048276           34 LIMLKMHEQWMAQHGLVYADEAEKAETAYDFRRQ--------------YRGYKLAVNKFADLTNDEFRSMYAGYDWQNQN   99 (345)
Q Consensus        34 ~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~n--------------~~~~~~g~N~fsDlt~eE~~~~~~~~~~~~~~   99 (345)
                      ++++.+|++||++|+|+|.+ +|+.+|++||.+|              +.+|++|+|+|+|||.|||.+++++..   .+
T Consensus         6 ~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~---~~   81 (316)
T d1cs8a_           6 HSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ---NR   81 (316)
T ss_dssp             GGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBC---CC
T ss_pred             HHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccc---cc
Confidence            56778899999999999976 5778999999998              358999999999999999999987655   32


Q ss_pred             CCCccCCCCCCCCCCCCCCCCCCCCCceecccCCCCCccccCCCCcchHHHHHHHHHHHHHHHhcCCCCcCChhHhhhcC
Q 048276          100 SPVISTSDPDASSPMDANSTVTDVPSSMDSRENGAVTPVKDQGDCNCCWAFSSVAAVEGITKIETGKLMSLSEQELVDCD  179 (345)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpV~dQg~cgsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~  179 (345)
                      ....       ..... .....+||++||||++|+++||||||.||||||||+++++|++++++++..+.||+|+|+||+
T Consensus        82 ~~~~-------~~~~~-~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~  153 (316)
T d1cs8a_          82 KPRK-------GKVFQ-EPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCS  153 (316)
T ss_dssp             CCSC-------CEECC-CCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHC
T ss_pred             cccc-------Ccccc-CcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhcc
Confidence            2211       11111 233458999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHcCCCCCCCcccccCCCCCCCCCCcccCCCcceEeeeeEEccCChHHHHHHHHh-CCCe
Q 048276          180 TGSFDRGCTVGRMDTAFEFIKNNNGLTTEADYPFVGNDYGACKTTKDENDAAAATISGFKFVPANNEQALMQVVA-DQPV  258 (345)
Q Consensus       180 ~~~~~~gc~gG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~c~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPV  258 (345)
                      ....+.+|.||.+..|+.|+..++++.+|.++||.... ..|...   .......+..+.... .+.+.|+++|. +|||
T Consensus       154 ~~~~~~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv  228 (316)
T d1cs8a_         154 GPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE-ESCKYN---PKYSVANDAGFVDIP-KQEKALMKAVATVGPI  228 (316)
T ss_dssp             GGGTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSC-CCCCCC---GGGEEECCCCEEECC-SCHHHHHHHHHHHCCE
T ss_pred             ccccCCCCCCCchHHHHHHHHhcCcccccccccccccc-cccccc---ccccccccccccccc-CcHHHHHHHHHHhCCe
Confidence            76668899999999999999998668889999998877 677655   233445555666555 57788888887 8999


Q ss_pred             EEEEecCCccccccccCeecCCCCC-CCCCeEEEEEEeccc---CCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCc
Q 048276          259 SVSIDSSGYMFQFYSSGIIKSEECG-TDIDHGVTAIGYGAS---SDGTKYWLVKNSWGTGWGEGGYVRIQREVGAQEGAC  334 (345)
Q Consensus       259 ~v~~~~~~~~f~~y~~Gi~~~~~~~-~~~~Hav~iVGyg~~---~~g~~ywivkNSWG~~WG~~GY~~i~~~~~~~~~~C  334 (345)
                      ++++++....|++|++|||..+.|+ ..++|||+|||||.+   .+|.+|||||||||++|||+|||||+|+..   |.|
T Consensus       229 ~v~i~~~~~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~---n~C  305 (316)
T d1cs8a_         229 SVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHC  305 (316)
T ss_dssp             EEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGG
T ss_pred             EEEEEeccchhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCC---CcC
Confidence            9999998678999999999998887 468999999999965   368899999999999999999999999864   359


Q ss_pred             ccccccceecC
Q 048276          335 GIAMMASYPTV  345 (345)
Q Consensus       335 gi~~~~~yp~~  345 (345)
                      ||++.++||+|
T Consensus       306 GI~~~~~yP~v  316 (316)
T d1cs8a_         306 GIASAASYPTV  316 (316)
T ss_dssp             GTTTSCEEECC
T ss_pred             ccCCeeeeeeC
Confidence            99999999986
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure