Citrus Sinensis ID: 048311

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSDA
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEcccccccccEEEEEccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEEcccEEEEEEEEccccccccccccccccccccccccccHHHHHHHcccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHccccccccEEEccccccccccEEEEEccccccccccccccccccccccccEEEEEEccccccccccccEEEEEEcccEEEEEEEEccccccccccccccccccccccccccHHHHHHHcccccccEEEEEEccc
Coil and Loop (DISEMBL)
MKKQLSSCVVLLICVLALVSLGveagtcnpsgkirgkkpppgqcnqenysdcckqgklysifrcsptvtghtkatltlnsfqkggdgggpsecdnqyhsddepvvalstgwynkgsrclNYINIygngnsvkakvvdecdstmgcdsdhdyqppcrnniVDASKAVWEAlgvpqskgemeIYWSDA
Flexible Loop (DISEMBL)
MKKQLSSCVVLLICVLALVSLGVEagtcnpsgkirgkkpppgqcNQENYSDCCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEAlgvpqskgemeiywsda
Low Complexity Region (SEG)
MKKQlsscvvllicvlalvslGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSDA
Disordered region (IsUnstruct)
******SCVVLLICVLALVSLGVEAGTC*******************NYSDCCKQGKLYSIFRCSPTVTGHTKATLTLN***********************PVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVP*************
Disordered Region (DISOPRED)
******SCVVLLICVLALVSLGVEAG*************************CCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSDA
Disordered Region (DISEMBL)
MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSDA
Disordered Region (DISPRO)
**KQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQC*QENYSDCCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSDA
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSDA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	186	2.2.26 [Sep-21-2011]
Q6H5X0	192	Putative ripening-related	yes	no	0.919	0.890	0.531	8e-47
Q7XVA8	183	Putative ripening-related	no	no	0.962	0.978	0.531	2e-41
P84527	189	Kiwellin OS=Actinidia del	N/A	no	0.967	0.952	0.502	3e-40
Q9M4H4	220	Ripening-related protein	no	no	0.720	0.609	0.607	5e-40
Q8LN49	276	Putative ripening-related	no	no	0.833	0.561	0.475	5e-38
Q9FWT5	213	Ripening-related protein	no	no	0.865	0.755	0.517	2e-37
Q9FWU1	216	Putative ripening-related	no	no	0.833	0.717	0.521	2e-36
Q7XD65	162	Putative ripening-related	no	no	0.548	0.629	0.442	2e-22
Q7XD66	167	Putative ripening-related	no	no	0.629	0.700	0.492	1e-19

>sp|Q6H5X0|RIP2_ORYSJ Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637000 PE=3 SV=1

 Score =  186 bits (472), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 102/192 (53%), Positives = 119/192 (61%), Gaps = 21/192 (10%)

Query: 9   VVLLICVLALVSL------------GVE-AGTCNPSGKIRGKKPPPGQCNQENYSDCCKQ 55
           + L I  L LVSL            G E AG CNPSG +R  +    Q       DCCK 
Sbjct: 8   LALAIAGLVLVSLPGLSRGDVDARRGRELAGGCNPSGTLRPSRSHSCQ-------DCCKA 60

Query: 56  GKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKG 115
           G+ Y  + CSP  TG TKA +TLN F+ GGDGG PSECD ++H + E VVALSTGWY  G
Sbjct: 61  GRSYPTYACSPATTGSTKAVMTLNDFEAGGDGGDPSECDGKFHKNTERVVALSTGWYANG 120

Query: 116 SRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVP-Q 174
            RC   I I  NG SV AKVVDECDS  GCD +H YQPPCR N+VDAS+AVW+AL +  +
Sbjct: 121 RRCNKNIRINANGRSVLAKVVDECDSLHGCDKEHAYQPPCRPNVVDASQAVWDALRITGE 180

Query: 175 SKGEMEIYWSDA 186
             GE +I WSDA
Sbjct: 181 DVGEYDITWSDA 192

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XVA8|RIP1_ORYSJ Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica GN=Os04g0364800 PE=3 SV=2

 Score =  168 bits (425), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/188 (53%), Positives = 118/188 (62%), Gaps = 9/188 (4%)

Query: 1   MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYS 60
           M   L +  +  + +++L  L    G CNPSG IR       Q       DCCK G+ Y 
Sbjct: 3   MTNCLLALAIAGVVLVSLPGLSRGDGECNPSGAIRSSTTHRCQ-------DCCKAGQSYP 55

Query: 61  IFRCSPTVTG-HTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCL 119
            + CSP  TG  T A +TLN F  GGDGGGPSECD  YHS+ E VVALSTGWY  GSRC 
Sbjct: 56  TYTCSPPTTGSSTDAVMTLNDFDAGGDGGGPSECDEMYHSNTELVVALSTGWYAGGSRCG 115

Query: 120 NYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVP-QSKGE 178
             + I  NG SV AKVVDECDS  GCD +H YQPPCR N+VDAS+AVW+ALG+  +  GE
Sbjct: 116 KSVRINANGRSVLAKVVDECDSQRGCDEEHAYQPPCRPNVVDASQAVWDALGITGEDVGE 175

Query: 179 MEIYWSDA 186
            +I WSDA
Sbjct: 176 YDITWSDA 183

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P84527|KIWEL_ACTDE Kiwellin OS=Actinidia deliciosa PE=1 SV=1

 Score =  164 bits (416), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/185 (50%), Positives = 112/185 (60%), Gaps = 5/185 (2%)

Query: 3   KQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIF 62
           + L+ C   LIC+    +   + GT    G     +P  G C       C  +GK Y  +
Sbjct: 9   RDLNDCDGQLICIKGKCNDDPQVGTHICRGTTHSHQP--GGCKPSGTLTC--RGKSYPTY 64

Query: 63  RCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYI 122
            CSP VT  T A LT N F +GGD GGPSECD  YH+++E +VALSTGWYN GSRC   I
Sbjct: 65  DCSPPVTSSTPAKLTNNDFSEGGDDGGPSECDESYHNNNERIVALSTGWYNGGSRCGKMI 124

Query: 123 NIYG-NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEI 181
            I   NG SV AKVVDECDS  GCD +H  QPPCRNNIVD S AVW ALG+ ++ G ++I
Sbjct: 125 RITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNVGVVDI 184

Query: 182 YWSDA 186
            WS A
Sbjct: 185 TWSMA 189

Kissper is an anion-selective pore-forming peptide.

Actinidia deliciosa (taxid: 3627)

>sp|Q9M4H4|GRI22_VITVI Ripening-related protein grip22 OS=Vitis vinifera GN=grip22 PE=2 SV=1

 Score =  163 bits (413), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 96/135 (71%), Gaps = 1/135 (0%)

Query: 53  CKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWY 112
           CK GK  + + CSP +T  T A LT N+F+KGGDGGGPS CDN+YH + E +VALSTGWY
Sbjct: 86  CKGGKPKNTYTCSPPITSSTPAVLTNNNFEKGGDGGGPSACDNKYHDNSERIVALSTGWY 145

Query: 113 NKGSRCLNYINIYG-NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALG 171
           N GSRC   I I   NG SV AKVVDECDS  GCD +H  QPPC NNIVD S AVW ALG
Sbjct: 146 NGGSRCGKMIRITAQNGRSVLAKVVDECDSMHGCDKEHAGQPPCDNNIVDGSNAVWNALG 205

Query: 172 VPQSKGEMEIYWSDA 186
           +  + GE+++ WS A
Sbjct: 206 LDINIGEVDVTWSMA 220

Vitis vinifera (taxid: 29760)

>sp|Q8LN49|RIP5_ORYSJ Putative ripening-related protein 5 OS=Oryza sativa subsp. japonica GN=Os10g0490500 PE=3 SV=1

 Score =  157 bits (396), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 107/183 (58%), Gaps = 28/183 (15%)

Query: 9   VVLLICVLALVSLG-----VEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFR 63
           ++ L+  L+   L      V AG C PSG + GK    G C + N  DCC+ GK Y  +R
Sbjct: 3   MIFLLAALSTTHLASSLRPVAAGACRPSGYLPGKS---GNCEKSNDPDCCEDGKAYPQYR 59

Query: 64  CSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYIN 123
                            F+KG DGGGPSECDN YHSD E VVALSTGW+   +RC + + 
Sbjct: 60  -----------------FEKGKDGGGPSECDNAYHSDGELVVALSTGWFAGTARCGHRVR 102

Query: 124 IY---GNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEME 180
           I    G G SV AKVVDECDS  GCD +H+Y+ PC NNIVDAS AVW+ALG+ ++ G   
Sbjct: 103 ITASGGGGRSVVAKVVDECDSVHGCDGEHNYEAPCGNNIVDASPAVWDALGLDKNVGMEH 162

Query: 181 IYW 183
           I W
Sbjct: 163 ITW 165

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FWT5|RIP3_ORYSJ Ripening-related protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0490100 PE=2 SV=1

 Score =  154 bits (390), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/168 (51%), Positives = 110/168 (65%), Gaps = 7/168 (4%)

Query: 23  VEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGH---TKATLTLN 79
           +++ +C PSG I G     G CN +N S+CC+ G  Y  + CSP V      T A LTLN
Sbjct: 49  LQSSSCQPSGAITGTS---GDCNADNGSECCQDGVQYMTYACSPPVAAGGTGTAALLTLN 105

Query: 80  SFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGN-SVKAKVVDE 138
           SF  GGDGGG   C  +++ D + VVALSTGW++  SRC   + I  +G  SV A VVDE
Sbjct: 106 SFADGGDGGGAPSCTGRFYDDGQLVVALSTGWFDGRSRCEKDVVIRASGGASVTAMVVDE 165

Query: 139 CDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSDA 186
           CDS  GCDSDH+++PPCRNNIVD S AVW+ALG+ +  GE +I WSDA
Sbjct: 166 CDSQRGCDSDHNFEPPCRNNIVDGSPAVWDALGLNKDDGEAQITWSDA 213

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FWU1|RIP4_ORYSJ Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0490666 PE=3 SV=2

 Score =  152 bits (383), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/163 (52%), Positives = 111/163 (68%), Gaps = 8/163 (4%)

Query: 28  CNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGH--TKATLTLNSFQKGG 85
           C+ SG + GK    G+CN+ + SDCC  G+ Y  FRCSP V+    T ATLTLNSF +GG
Sbjct: 56  CHISGFLHGKA---GKCNRAHGSDCCVTGRRYPQFRCSPPVSSARPTPATLTLNSFARGG 112

Query: 86  DGGGPSECDNQYHSDDEPVVALSTGWY--NKGSRCLNYINIY-GNGNSVKAKVVDECDST 142
           DGGG S CD ++H D   VVALS+GW   +  SRC   I +  GNG S  A+VVDECDS 
Sbjct: 113 DGGGRSSCDGRFHPDTAMVVALSSGWLRLDGASRCNRMIRVAAGNGRSALARVVDECDSV 172

Query: 143 MGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSD 185
            GCD++H+++PPC N++VD S AVW+ALG+ +  GE ++ WSD
Sbjct: 173 NGCDAEHNFEPPCPNDVVDGSPAVWKALGLDEGVGEFKVTWSD 215

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XD65|RIP7_ORYSJ Putative ripening-related protein 7 OS=Oryza sativa subsp. japonica GN=Os10g0489400 PE=3 SV=1

 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 20/122 (16%)

Query: 74  ATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGN---- 129
           A +T+N F+KG DGGGP+ CD  YHSD E +VALST W+  G RC   I I  + +    
Sbjct: 50  AVMTVNGFEKGEDGGGPAACDGHYHSDGELIVALSTEWFAGGRRCHRRIRITPSEHGRRG 109

Query: 130 ------SVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYW 183
                 +V+A VVDECDS  G          C++++VD+S AVW ALG+    GE+ + W
Sbjct: 110 GGGGRRAVEATVVDECDSRRG----------CKDDVVDSSPAVWRALGLDTDSGEVRVTW 159

Query: 184 SD 185
           SD
Sbjct: 160 SD 161

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XD66|RIP6_ORYSJ Putative ripening-related protein 6 OS=Oryza sativa subsp. japonica GN=Os10g0489301 PE=3 SV=1

 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 13/130 (10%)

Query: 61  IFRCS-PTVTGH-TKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRC 118
           + RCS P V+   T A +T+N F++G DGGGP+ CD +YHSD   V ALSTGW+  G RC
Sbjct: 47  MRRCSSPAVSEDGTPAVMTVNGFEEGEDGGGPAACDGRYHSDRSLVAALSTGWFAGGRRC 106

Query: 119 LNYINIYG--NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK 176
              I I    NG SV A VVDECDS  G          C+++IVD S AVW ALG+  + 
Sbjct: 107 HRGIRITSRQNGRSVVATVVDECDSRHG---------GCKDDIVDTSAAVWSALGLDTNV 157

Query: 177 GEMEIYWSDA 186
           GE+ + WSDA
Sbjct: 158 GEVPVTWSDA 167

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
224067882	188	predicted protein [Populus trichocarpa]	1.0	0.989	0.765	9e-78
255577889	187	Kiwellin, putative [Ricinus communis] gi	0.994	0.989	0.760	1e-76
255545110	187	Kiwellin, putative [Ricinus communis] gi	0.994	0.989	0.75	6e-76
224067880	188	predicted protein [Populus trichocarpa]	0.946	0.936	0.762	1e-75
224127059	188	predicted protein [Populus trichocarpa]	0.994	0.984	0.751	5e-74
255541550	187	Kiwellin, putative [Ricinus communis] gi	0.994	0.989	0.718	2e-70
147818444	188	hypothetical protein VITISV_009241 [Viti	0.978	0.968	0.699	4e-70
297745262	188	unnamed protein product [Vitis vinifera]	0.978	0.968	0.704	5e-70
225454174	188	PREDICTED: putative ripening-related pro	0.951	0.941	0.720	9e-70
356506241	186	PREDICTED: putative ripening-related pro	0.994	0.994	0.700	2e-69

>gi|224067882|ref|XP_002302580.1| predicted protein [Populus trichocarpa] gi|222844306|gb|EEE81853.1| predicted protein [Populus trichocarpa]

 Score =  294 bits (753), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 144/188 (76%), Positives = 157/188 (83%), Gaps = 2/188 (1%)

Query: 1   MKKQL-SSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLY 59
           MKKQ+ SS   +    LA + L +EA TC PSG IRG+KPPP QCNQEN SDCC  GKLY
Sbjct: 1   MKKQVCSSAFFVSFLFLATLCLSIEAQTCKPSGNIRGRKPPPNQCNQENDSDCCADGKLY 60

Query: 60  SIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCL 119
            IF+CSP VTG TKATLTLNSF+KGGDGG PSECDN YHSDD PVVALSTGWYN G+RCL
Sbjct: 61  PIFKCSPGVTGRTKATLTLNSFEKGGDGGAPSECDNHYHSDDTPVVALSTGWYNHGNRCL 120

Query: 120 NYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK-GE 178
           N+INI+GNG SVKA VVDECDSTMGCDSDHDYQPPC NNIVDASKAVW+ALGVP+S  G 
Sbjct: 121 NFINIHGNGKSVKAMVVDECDSTMGCDSDHDYQPPCANNIVDASKAVWKALGVPESDWGG 180

Query: 179 MEIYWSDA 186
           M+IYWSDA
Sbjct: 181 MDIYWSDA 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577889|ref|XP_002529817.1| Kiwellin, putative [Ricinus communis] gi|223530694|gb|EEF32566.1| Kiwellin, putative [Ricinus communis]

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 143/188 (76%), Positives = 157/188 (83%), Gaps = 3/188 (1%)

Query: 1   MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYS 60
           MKKQ  S  V LIC + L    VE+ TC PSGKIRG+K PPGQCN+EN SDCC QGK+Y+
Sbjct: 1   MKKQACS-KVFLICFMFLAVSSVESQTCRPSGKIRGRKSPPGQCNRENDSDCCVQGKMYT 59

Query: 61  IFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLN 120
            ++CSP VTGHTKATLT+NSF  GGDGG PSECDNQYHSDDE VVALSTGW++  SRCLN
Sbjct: 60  TYKCSPPVTGHTKATLTVNSFAPGGDGGAPSECDNQYHSDDELVVALSTGWFDNKSRCLN 119

Query: 121 YINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGV--PQSKGE 178
           YI I+GNG SVKAKVVDECDSTMGCDSDHDYQPPC NNIVDASKAVW+ALGV  P S GE
Sbjct: 120 YIMIHGNGQSVKAKVVDECDSTMGCDSDHDYQPPCPNNIVDASKAVWKALGVSDPDSVGE 179

Query: 179 MEIYWSDA 186
           M+IYWSDA
Sbjct: 180 MDIYWSDA 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545110|ref|XP_002513616.1| Kiwellin, putative [Ricinus communis] gi|223547524|gb|EEF49019.1| Kiwellin, putative [Ricinus communis]

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 158/188 (84%), Gaps = 3/188 (1%)

Query: 1   MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYS 60
           MKKQ+ S +  L C + LV   VE+ TC PSGKIRG KPPPGQCNQEN SDCC QGK+Y+
Sbjct: 1   MKKQICSNIFFL-CFVFLVITSVESQTCRPSGKIRGTKPPPGQCNQENDSDCCVQGKMYT 59

Query: 61  IFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLN 120
            ++CSP VTGHTKATLT+NSF  GGDGG PSECDNQYHSD+E VVALSTGW++  SRCLN
Sbjct: 60  TYKCSPPVTGHTKATLTVNSFAPGGDGGAPSECDNQYHSDNELVVALSTGWFDDKSRCLN 119

Query: 121 YINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGV--PQSKGE 178
           +I I+GNG SVKAKVVDECDSTMGCDSDHDYQPPC NNIVDASKAVW+ALGV  P + GE
Sbjct: 120 HIMIHGNGKSVKAKVVDECDSTMGCDSDHDYQPPCPNNIVDASKAVWKALGVSDPDNVGE 179

Query: 179 MEIYWSDA 186
           M+IYWSDA
Sbjct: 180 MDIYWSDA 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067880|ref|XP_002302579.1| predicted protein [Populus trichocarpa] gi|222844305|gb|EEE81852.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 135/177 (76%), Positives = 151/177 (85%), Gaps = 1/177 (0%)

Query: 11  LLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTG 70
           LL+ ++   +L +EA  C PSG+IRG  PPP QCNQEN SDCCK GK Y+ ++CSP V+ 
Sbjct: 12  LLVVLVLTYALHIEAQQCRPSGQIRGTNPPPDQCNQENDSDCCKDGKYYTTYKCSPLVSS 71

Query: 71  HTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGNS 130
           HTKATLTLNSF+ GGDGG PSECDNQYHSDD PVVALSTGWYN GSRCLNY+NI+GNG S
Sbjct: 72  HTKATLTLNSFEGGGDGGAPSECDNQYHSDDTPVVALSTGWYNHGSRCLNYVNIHGNGKS 131

Query: 131 VKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK-GEMEIYWSDA 186
           VKA VVDECDSTMGCDSDHDYQPPC NNIVDASKAVW+ALGVP+S  GEM+IYWSDA
Sbjct: 132 VKAMVVDECDSTMGCDSDHDYQPPCANNIVDASKAVWKALGVPESDWGEMDIYWSDA 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127059|ref|XP_002329376.1| predicted protein [Populus trichocarpa] gi|222870426|gb|EEF07557.1| predicted protein [Populus trichocarpa]

 Score =  282 bits (721), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 142/189 (75%), Positives = 157/189 (83%), Gaps = 4/189 (2%)

Query: 1   MKKQLSSCVVLLICVLALV--SLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKL 58
           MKKQ+ S  VLLIC+  L   SL VEA TC PSGKI G+K P GQCN+EN S CC +G+L
Sbjct: 1   MKKQVWS-SVLLICLSFLFASSLCVEAQTCRPSGKIMGRKAPKGQCNEENDSLCCIKGRL 59

Query: 59  YSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRC 118
           Y+ ++CSP  T HTKATLTLNSF+KGGDGG PSECDNQYHSDD PVVALSTGW+N  SRC
Sbjct: 60  YTTYKCSPPATNHTKATLTLNSFEKGGDGGAPSECDNQYHSDDTPVVALSTGWFNHKSRC 119

Query: 119 LNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK-G 177
           LNYINIYGNG SVKA VVDECDSTMGCD+DHDYQPPC NNIVDASKAVW AL VP ++ G
Sbjct: 120 LNYINIYGNGRSVKAMVVDECDSTMGCDADHDYQPPCPNNIVDASKAVWTALEVPLNQWG 179

Query: 178 EMEIYWSDA 186
           EMEI+WSDA
Sbjct: 180 EMEIHWSDA 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541550|ref|XP_002511839.1| Kiwellin, putative [Ricinus communis] gi|223549019|gb|EEF50508.1| Kiwellin, putative [Ricinus communis]

 Score =  270 bits (689), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/188 (71%), Positives = 156/188 (82%), Gaps = 3/188 (1%)

Query: 1   MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYS 60
           MKKQ+ S ++L   ++ L++ G E+ TC PSGKIRG+KPPPGQCNQE+ SDCC +GK+Y+
Sbjct: 1   MKKQVCSNILLTCFLVLLLN-GAESQTCGPSGKIRGRKPPPGQCNQEHDSDCCVEGKMYT 59

Query: 61  IFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLN 120
            + CSP VTGHTKA LT+NSF  GGDGGGPSECDN+YHSDDE VVALSTGW+++ SRCLN
Sbjct: 60  TYNCSPPVTGHTKAALTINSFAPGGDGGGPSECDNKYHSDDELVVALSTGWFDRKSRCLN 119

Query: 121 YINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGV--PQSKGE 178
           YI I+GNG SVKAKVVDECDSTMGCDSDHDYQPPC NNIVDASKA+W  LGV  P   G 
Sbjct: 120 YIMIHGNGKSVKAKVVDECDSTMGCDSDHDYQPPCPNNIVDASKAIWNTLGVSDPDDVGA 179

Query: 179 MEIYWSDA 186
           MEI WSDA
Sbjct: 180 MEIVWSDA 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147818444|emb|CAN71973.1| hypothetical protein VITISV_009241 [Vitis vinifera]

 Score =  269 bits (688), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 128/183 (69%), Positives = 148/183 (80%), Gaps = 1/183 (0%)

Query: 5   LSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRC 64
           L + ++L+  +     L V+   C+PSGKIRGKKPPPG+CNQ N SDCCK+GKLY+ ++C
Sbjct: 6   LKASLLLMAILFFTDFLNVDGQVCHPSGKIRGKKPPPGECNQGNDSDCCKEGKLYTTYKC 65

Query: 65  SPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINI 124
           SPTV+ HTKA LTLN F+K  DGG PSECDNQYHSDD PVVALSTGWYNKGSRCLN I I
Sbjct: 66  SPTVSSHTKAYLTLNGFEKDEDGGAPSECDNQYHSDDTPVVALSTGWYNKGSRCLNNITI 125

Query: 125 YGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGE-MEIYW 183
             NG SV A VVDECDSTMGCDSDHDYQPPC NNIVDAS+AVWEALGVP+ + E ++I W
Sbjct: 126 TANGRSVVAMVVDECDSTMGCDSDHDYQPPCANNIVDASRAVWEALGVPRDQWEGLDITW 185

Query: 184 SDA 186
           +DA
Sbjct: 186 TDA 188

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745262|emb|CBI40342.3| unnamed protein product [Vitis vinifera]

 Score =  268 bits (686), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 129/183 (70%), Positives = 148/183 (80%), Gaps = 1/183 (0%)

Query: 5   LSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRC 64
           L + ++L+  +L    L VE   C+PSGKIRGKKPPPG+CNQ N SDCCK+GKLY+ ++C
Sbjct: 6   LKASLLLMAILLFTDCLIVEGQACHPSGKIRGKKPPPGECNQGNDSDCCKEGKLYTTYKC 65

Query: 65  SPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINI 124
           SPTV+ HTKA LTLN FQK  DGG PSECDNQYHSDD PVVALSTGWYNKGSRCLN I I
Sbjct: 66  SPTVSSHTKAYLTLNGFQKDEDGGAPSECDNQYHSDDTPVVALSTGWYNKGSRCLNNITI 125

Query: 125 YGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK-GEMEIYW 183
             NG SV A VVDECDSTMGCDSDHDYQPPC NNI+DAS+AVW+ALGVP  + G ++I W
Sbjct: 126 SANGRSVVAMVVDECDSTMGCDSDHDYQPPCTNNIIDASRAVWKALGVPHDQWGGLDITW 185

Query: 184 SDA 186
           +DA
Sbjct: 186 TDA 188

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454174|ref|XP_002273597.1| PREDICTED: putative ripening-related protein 2-like [Vitis vinifera]

 Score =  268 bits (684), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 129/179 (72%), Positives = 146/179 (81%), Gaps = 2/179 (1%)

Query: 10  VLLICVLALVS-LGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTV 68
           +LLI +L     L VE   C+PSGKIRGKKPPPG+CNQ N SDCCK+GKLY+ ++CSPTV
Sbjct: 10  LLLIAILVFTDCLNVEGQVCHPSGKIRGKKPPPGECNQGNDSDCCKEGKLYTTYKCSPTV 69

Query: 69  TGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNG 128
           + H+KA LTLN F+K  DGG PSECDN YHSDD PVVALSTGWYNKGSRCLN I I  NG
Sbjct: 70  SSHSKAYLTLNGFEKDEDGGAPSECDNHYHSDDTPVVALSTGWYNKGSRCLNNITITANG 129

Query: 129 NSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK-GEMEIYWSDA 186
            SV A VVDECDSTMGCDSDHDYQPPC NNIVDAS+AVW+ALGVPQ + G ++I W+DA
Sbjct: 130 RSVVAMVVDECDSTMGCDSDHDYQPPCANNIVDASRAVWKALGVPQDQWGGLDITWTDA 188

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506241|ref|XP_003521895.1| PREDICTED: putative ripening-related protein 2-like [Glycine max]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/187 (70%), Positives = 151/187 (80%), Gaps = 2/187 (1%)

Query: 1   MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYS 60
           M   ++S V+LLI +++   L  EA  C PSG+I GKKPPPG+CN+EN SDCC QGK Y+
Sbjct: 1   MSNSIASFVLLLI-LISTNCLCSEAQQCRPSGRIMGKKPPPGECNKENDSDCCVQGKAYT 59

Query: 61  IFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLN 120
            ++CSP V+ HTKA LTLNSF+KGGDGGGPSECDNQYHSDD PVVALSTGW+N  SRCL+
Sbjct: 60  TYKCSPAVSRHTKAELTLNSFEKGGDGGGPSECDNQYHSDDTPVVALSTGWFNDRSRCLH 119

Query: 121 YINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK-GEM 179
            I I GNG SV A VVDECDSTMGCD DHDYQPPC NNIVDASKAVW+ALGVP ++ G +
Sbjct: 120 NITISGNGKSVVAMVVDECDSTMGCDEDHDYQPPCSNNIVDASKAVWKALGVPHNQWGGL 179

Query: 180 EIYWSDA 186
           EI WSDA
Sbjct: 180 EITWSDA 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

No hits with e-value below 0.001 by BLAST

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P84527	KIWEL_ACTDE	No assigned EC number	0.5027	0.9677	0.9523	N/A	no
Q6H5X0	RIP2_ORYSJ	No assigned EC number	0.5312	0.9193	0.8906	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_II001463 hypothetical protein (188 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	186
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.77
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.7
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.42
PLN00193	256	expansin-A; Provisional	99.29
PLN00050	247	expansin A; Provisional	99.24
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	98.85
PRK10672	361	rare lipoprotein A; Provisional	98.78
PLN03023	247	Expansin-like B1; Provisional	98.74
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	98.33
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	98.07
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	97.78
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	97.65

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.77  E-value=1.7e-18  Score=136.71  Aligned_cols=81  Identities=26%  Similarity=0.455  Sum_probs=71.8

Q ss_pred             CCCCCCCCccCCCccEEEeeccccCCCCCCccEEEEEe-----------CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCC
Q 048311           89 GPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYG-----------NGNSVKAKVVDECDSTMGCDSDHDYQPPCRN  157 (186)
Q Consensus        89 g~gaCg~~~~sdsd~VVALstg~~~~~~~CGk~I~It~-----------nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~  157 (186)
                      .++||+ ..+.+++++|||++.+|++++.||++++|+.           |||+|+++|+|+||            ++|. 
T Consensus        33 ~~gAC~-~~~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~~c~gksV~V~VtD~CP------------~~C~-   98 (125)
T PLN03024         33 TPSACY-RGTSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPHPCTGKSVTVKIVDHCP------------SGCA-   98 (125)
T ss_pred             CCcccc-CCCCCCCEeEEeCHHHcCCCcccCceEEEEECCCCccccccccCCeEEEEEEcCCC------------CCCC-
Confidence            456997 4577889999999999999999999999983           58999999999994            2576 


Q ss_pred             CeeecCHHHHHHhCCCCCCcEEEEEEE
Q 048311          158 NIVDASKAVWEALGVPQSKGEMEIYWS  184 (186)
Q Consensus       158 n~LDLS~avF~aLg~~~~~G~i~ItW~  184 (186)
                      ++||||+++|++|+ +.+.|+++|+|.
T Consensus        99 ~~~DLS~~AF~~iA-~~~aG~v~V~y~  124 (125)
T PLN03024         99 STLDLSREAFAQIA-NPVAGIINIDYI  124 (125)
T ss_pred             CceEcCHHHHHHhc-CccCCEEEEEEe
Confidence            59999999999999 788999999996

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.70  E-value=3e-17  Score=117.59  Aligned_cols=65  Identities=34%  Similarity=0.637  Sum_probs=57.6

Q ss_pred             EEeeccccCCCCCCccEEEEEe-----C-----C--cEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCC
Q 048311          105 VALSTGWYNKGSRCLNYINIYG-----N-----G--NSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGV  172 (186)
Q Consensus       105 VALstg~~~~~~~CGk~I~It~-----n-----G--kSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~  172 (186)
                      ||++..||+++..||++++++.     .     .  |+|+|+|+|+|             |+|.+++||||+++|++|+ 
T Consensus         2 ~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~C-------------p~~~~~~lDLS~~aF~~la-   67 (78)
T PF03330_consen    2 AAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRC-------------PGCPPNHLDLSPAAFKALA-   67 (78)
T ss_dssp             EEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE--------------TTSSSSEEEEEHHHHHHTB-
T ss_pred             eEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccC-------------CCCcCCEEEeCHHHHHHhC-
Confidence            7899999999999999999986     1     2  99999999999             8899999999999999999 


Q ss_pred             CCCCcEEEEEE
Q 048311          173 PQSKGEMEIYW  183 (186)
Q Consensus       173 ~~~~G~i~ItW  183 (186)
                      +.+.|+++|+|
T Consensus        68 ~~~~G~i~V~w   78 (78)
T PF03330_consen   68 DPDAGVIPVEW   78 (78)
T ss_dssp             STTCSSEEEEE
T ss_pred             CCCceEEEEEC
Confidence            88999999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.42  E-value=2.9e-13  Score=100.77  Aligned_cols=77  Identities=22%  Similarity=0.399  Sum_probs=61.1

Q ss_pred             EEEeeccccCCCCCCccEEEEEe--------CCcEEEEEEeeeCCCCCCCCCCCCCCCCC--CCCeeecCHHHHHHhCCC
Q 048311          104 VVALSTGWYNKGSRCLNYINIYG--------NGNSVKAKVVDECDSTMGCDSDHDYQPPC--RNNIVDASKAVWEALGVP  173 (186)
Q Consensus       104 VVALstg~~~~~~~CGk~I~It~--------nGkSV~a~VVD~Cds~~GCd~~~~~~p~C--~~n~LDLS~avF~aLg~~  173 (186)
                      .+|+|+.+|+++..||++++|+-        ++++|+++|+|+||...+..++.  ..-|  +..|+|||+.+|.+|+ .
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~--~~~C~~~~~hfDLS~~AF~~iA-~   77 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDN--GGWCNPPRKHFDLSQPAFEKIA-Q   77 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccC--CCccCCCCcCeEcCHHHHHHHh-h
Confidence            37999999999999999999982        45799999999997542221110  0236  3479999999999999 7


Q ss_pred             CCCcEEEEEE
Q 048311          174 QSKGEMEIYW  183 (186)
Q Consensus       174 ~~~G~i~ItW  183 (186)
                      ...|+|+|+|
T Consensus        78 ~~~Gvi~v~y   87 (87)
T smart00837       78 YKAGIVPVKY   87 (87)
T ss_pred             hcCCEEeeEC
Confidence            8899999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PLN00193 expansin-A; Provisional

Probab=99.29  E-value=1.5e-11  Score=107.47  Aligned_cols=93  Identities=20%  Similarity=0.365  Sum_probs=69.7

Q ss_pred             CCCCCCCc---cCCCccEEEeeccccCCCCCCccEEEEEe----------CCcEEEEEEeeeCCCCCCCCCCCCCCCCCC
Q 048311           90 PSECDNQY---HSDDEPVVALSTGWYNKGSRCLNYINIYG----------NGNSVKAKVVDECDSTMGCDSDHDYQPPCR  156 (186)
Q Consensus        90 ~gaCg~~~---~sdsd~VVALstg~~~~~~~CGk~I~It~----------nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~  156 (186)
                      -||||-.-   ....-+++||++..|+++..||++++|+-          +|++|+++|+|.||...+=  .-+...-|.
T Consensus        48 gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~~~~~~~C~~g~sV~Vt~td~CP~n~~~--~~~~ggwC~  125 (256)
T PLN00193         48 GGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCIKGASVTITATNFCPPNYAL--PNNNGGWCN  125 (256)
T ss_pred             CcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECCCCCCCccccCCCeEEEEEecCCCCcccc--cccCCCcCC
Confidence            36999431   11246899999999999999999999984          4679999999999742110  000012263


Q ss_pred             --CCeeecCHHHHHHhCCCCCCcEEEEEEEe
Q 048311          157 --NNIVDASKAVWEALGVPQSKGEMEIYWSD  185 (186)
Q Consensus       157 --~n~LDLS~avF~aLg~~~~~G~i~ItW~~  185 (186)
                        ..|+|||+.+|.+|+ ....|+++|+|.-
T Consensus       126 ~~~~HFDLS~~AF~~iA-~~~~Giv~V~yrR  155 (256)
T PLN00193        126 PPLQHFDMAQPAWEKIG-IYRGGIVPVLFQR  155 (256)
T ss_pred             CCCcccccCHHHHHHHh-hhcCCeEeEEEEE
Confidence              379999999999999 6789999999963

>PLN00050 expansin A; Provisional

Probab=99.24  E-value=2.8e-11  Score=105.27  Aligned_cols=92  Identities=18%  Similarity=0.309  Sum_probs=69.8

Q ss_pred             CCCCCCcc---CCCccEEEeeccccCCCCCCccEEEEEe-CC------cEEEEEEeeeCCCCCCCCCCCCCCCCCC--CC
Q 048311           91 SECDNQYH---SDDEPVVALSTGWYNKGSRCLNYINIYG-NG------NSVKAKVVDECDSTMGCDSDHDYQPPCR--NN  158 (186)
Q Consensus        91 gaCg~~~~---sdsd~VVALstg~~~~~~~CGk~I~It~-nG------kSV~a~VVD~Cds~~GCd~~~~~~p~C~--~n  158 (186)
                      ||||-...   .-..+++||++.+|+++..||.+++|+- ++      ++|+++|+|+||...+..++  ...-|.  ..
T Consensus        44 GACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~~~~C~~gsV~V~itd~CP~~~~~~~~--~~gwC~~~~~  121 (247)
T PLN00050         44 GACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPGSIIITATNFCPPNLALPNN--DGGWCNPPQQ  121 (247)
T ss_pred             cccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCCCcccCCCcEEEEEecCCCCCcCcCcc--CCCcCCCCCc
Confidence            69993321   1256899999999999999999999995 22      48999999999753221100  012273  48


Q ss_pred             eeecCHHHHHHhCCCCCCcEEEEEEEe
Q 048311          159 IVDASKAVWEALGVPQSKGEMEIYWSD  185 (186)
Q Consensus       159 ~LDLS~avF~aLg~~~~~G~i~ItW~~  185 (186)
                      |+|||+.+|.+|+ ....|+|+|+|.-
T Consensus       122 hFDLS~~AF~~iA-~~~aGii~V~yRR  147 (247)
T PLN00050        122 HFDLSQPVFQKIA-QYKAGIVPVQYRR  147 (247)
T ss_pred             ccccCHHHHHHHh-hhcCCeeeeEEEE
Confidence            9999999999999 7889999999963

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=98.85  E-value=3.8e-09  Score=82.99  Aligned_cols=56  Identities=18%  Similarity=0.430  Sum_probs=41.6

Q ss_pred             CCCCCccEEEEEe--CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCC---CCcEEEEEEEe
Q 048311          114 KGSRCLNYINIYG--NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQ---SKGEMEIYWSD  185 (186)
Q Consensus       114 ~~~~CGk~I~It~--nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~---~~G~i~ItW~~  185 (186)
                      +...|||+++||.  +|.+++++|||+|                .++.|||.+.||.+|-.+-   ..|.+.|+|+|
T Consensus        56 gq~~CGkClrVTNt~tga~~~~RIVDqC----------------snGGLDld~~vF~~iDtdG~G~~~Ghl~V~y~f  116 (119)
T PF00967_consen   56 GQDSCGKCLRVTNTATGAQVTVRIVDQC----------------SNGGLDLDPTVFNQIDTDGQGYAQGHLIVDYEF  116 (119)
T ss_dssp             SGGGTT-EEEEE-TTT--EEEEEEEEE-----------------SSSSEES-SSSHHHH-SSSHHHHHTEEEEEEEE
T ss_pred             CcccccceEEEEecCCCcEEEEEEEEcC----------------CCCCcccChhHHhhhccCCcccccceEEEEEEE
Confidence            3568999999997  7999999999999                4568999999999997322   37999999987

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PRK10672 rare lipoprotein A; Provisional

Probab=98.78  E-value=3.1e-07  Score=83.94  Aligned_cols=111  Identities=17%  Similarity=0.253  Sum_probs=80.3

Q ss_pred             CCCCCccccCCeeeeeeeeCCCccccceeEEEecccccCCCCCCCCCCCCCccCCCccEEEeeccccCCCCCCccEEEEE
Q 048311           46 QENYSDCCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIY  125 (186)
Q Consensus        46 ~~~~~~cc~~g~~y~~~~csp~v~~~t~a~lt~n~f~~g~dgGg~gaCg~~~~sdsd~VVALstg~~~~~~~CGk~I~It  125 (186)
                      ..+..+-=+.||.|...+=....+..-.|..|-..|     .|..+|-|+.|+. ..|.+|-.+-      --+-.|+|+
T Consensus        55 ~~~n~~Y~v~G~~Y~~~~~~~~~~~~G~ASwYg~~f-----~G~~TA~Ge~~~~-~~~tAAH~tL------Plps~vrVt  122 (361)
T PRK10672         55 PTANQDYQRNGKSYKIVQDPSNFSQAGLAAIYDAEA-----GSNLTASGERFDP-NALTAAHPTL------PIPSYVRVT  122 (361)
T ss_pred             ccCCCCeEECCEEEEeCccCCCcceEEEEEEeCCcc-----CCCcCcCceeecC-CcCeeeccCC------CCCCEEEEE
Confidence            444456778899999864222333344455544444     4788999977764 6677765532      477899999


Q ss_pred             e--CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCCCCcEEEEE
Q 048311          126 G--NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIY  182 (186)
Q Consensus       126 ~--nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~~~G~i~It  182 (186)
                      .  |||+|+++|.|++++..|             ..||||.+++++|+. ...++++|+
T Consensus       123 Nl~ngrsvvVrVnDRGP~~~g-------------RiiDLS~aAA~~Lg~-~~~~~V~ve  167 (361)
T PRK10672        123 NLANGRMIVVRINDRGPYGPG-------------RVIDLSRAAADRLNT-SNNTKVRID  167 (361)
T ss_pred             ECCCCcEEEEEEeCCCCCCCC-------------CeeEcCHHHHHHhCC-CCCceEEEE
Confidence            7  999999999999976543             699999999999995 456777765

>PLN03023 Expansin-like B1; Provisional

Probab=98.74  E-value=6.1e-08  Score=84.56  Aligned_cols=80  Identities=16%  Similarity=0.226  Sum_probs=62.3

Q ss_pred             CCCCCCCc---cCCCccEEEeeccccCCCCCCccEEEEEe------CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCee
Q 048311           90 PSECDNQY---HSDDEPVVALSTGWYNKGSRCLNYINIYG------NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIV  160 (186)
Q Consensus        90 ~gaCg~~~---~sdsd~VVALstg~~~~~~~CGk~I~It~------nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~L  160 (186)
                      -||||-.-   ....-+++|++ .+|+++..||.+.+|+-      .+++|+++|+|.|             +++ ..|+
T Consensus        43 gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~~~~~C~~~~v~V~iTd~~-------------~~~-~~hF  107 (247)
T PLN03023         43 TGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCKAPNLCSDDGVNVVVTDYG-------------EGD-KTDF  107 (247)
T ss_pred             CccccCCccccCCCcceeeeeh-hhhcCCchhcccEEeecCCCCccCCCCeEEEEEeCC-------------CCC-CCcc
Confidence            35897321   22245789998 99999999999999984      4568999999999             333 5799


Q ss_pred             ecCHHHHHHhCCC------CCCcEEEEEEE
Q 048311          161 DASKAVWEALGVP------QSKGEMEIYWS  184 (186)
Q Consensus       161 DLS~avF~aLg~~------~~~G~i~ItW~  184 (186)
                      |||..+|.+|+.+      ...|+|+|++.
T Consensus       108 dLS~~AF~~iA~pg~~~~l~~aGiv~v~Yr  137 (247)
T PLN03023        108 ILSPRAYARLARPNMAAELFAYGVVDVEYR  137 (247)
T ss_pred             ccCHHHHHHHhCccccchhccCcEEEeEEE
Confidence            9999999999932      24599999874

>TIGR00413 rlpA rare lipoprotein A

Probab=98.33  E-value=4.1e-06  Score=71.70  Aligned_cols=74  Identities=22%  Similarity=0.250  Sum_probs=59.8

Q ss_pred             CCCCCCCCCccCCCccEEEeeccccCCCCCCccEEEEEe--CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHH
Q 048311           88 GGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYG--NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKA  165 (186)
Q Consensus        88 Gg~gaCg~~~~sdsd~VVALstg~~~~~~~CGk~I~It~--nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~a  165 (186)
                      |..+|.|+.|+. ..|.+|-.+-      ..|-.|+|+.  |||+|+++|.|++|+..|             ..||||++
T Consensus        12 G~~TAnGe~y~~-~~~tAAHktL------PlgT~V~VtNl~ngrsviVrVnDRGPf~~g-------------RiIDLS~a   71 (208)
T TIGR00413        12 GRKTANGEVYNM-KALTAAHKTL------PFNTYVKVTNLHNNRSVIVRINDRGPFSDD-------------RIIDLSHA   71 (208)
T ss_pred             CCcCCCCeecCC-CccccccccC------CCCCEEEEEECCCCCEEEEEEeCCCCCCCC-------------CEEECCHH
Confidence            778999977765 5666665532      5888999996  999999999999976544             69999999


Q ss_pred             HHHHhCCCCCCcEEEEE
Q 048311          166 VWEALGVPQSKGEMEIY  182 (186)
Q Consensus       166 vF~aLg~~~~~G~i~It  182 (186)
                      ++++|+ -.+.|+.+|.
T Consensus        72 AA~~Lg-~~~~G~a~V~   87 (208)
T TIGR00413        72 AAREIG-LISRGVGQVR   87 (208)
T ss_pred             HHHHcC-CCcCceEEEE
Confidence            999999 5667777654

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=98.07  E-value=5.8e-05  Score=65.65  Aligned_cols=75  Identities=27%  Similarity=0.322  Sum_probs=54.1

Q ss_pred             CCCCCCCCCccCCCccEEEeeccccCCCCCCccEEEEEe--CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHH
Q 048311           88 GGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYG--NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKA  165 (186)
Q Consensus        88 Gg~gaCg~~~~sdsd~VVALstg~~~~~~~CGk~I~It~--nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~a  165 (186)
                      |..+|=|+.|+. ..+.+|=.+=      -=+-.++|+.  |||+|+++|.|+.|+..|             .+||||.+
T Consensus        96 gr~TA~Ge~~n~-~~~tAAH~TL------P~~t~v~VtNl~NgrsvvVRINDRGPf~~g-------------RiIDlS~a  155 (233)
T COG0797          96 GRKTANGERYDM-NALTAAHKTL------PLPTYVRVTNLDNGRSVVVRINDRGPFVSG-------------RIIDLSKA  155 (233)
T ss_pred             CccccCcccccc-cccccccccC------CCCCEEEEEEccCCcEEEEEEeCCCCCCCC-------------cEeEcCHH
Confidence            555566644443 3444443322      3567899997  999999999999976644             79999999


Q ss_pred             HHHHhCCCCCCcEEE--EEE
Q 048311          166 VWEALGVPQSKGEME--IYW  183 (186)
Q Consensus       166 vF~aLg~~~~~G~i~--ItW  183 (186)
                      ++++|+ -...|+.+  |+|
T Consensus       156 AA~~l~-~~~~G~a~V~i~~  174 (233)
T COG0797         156 AADKLG-MIRSGVAKVRIEV  174 (233)
T ss_pred             HHHHhC-CccCceEEEEEEE
Confidence            999999 66777775  554

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=97.78  E-value=0.00012  Score=57.85  Aligned_cols=65  Identities=15%  Similarity=0.271  Sum_probs=47.0

Q ss_pred             ccEEEee--ccccCCCCCCccEEEEEeCCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCC--CCCCc
Q 048311          102 EPVVALS--TGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGV--PQSKG  177 (186)
Q Consensus       102 d~VVALs--tg~~~~~~~CGk~I~It~nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~--~~~~G  177 (186)
                      -+|.+..  ++|  +.+.||++.+++++||+|.+..+|.=+                 ..+++|+++|+.|..  ....|
T Consensus        43 p~IGg~~~V~gW--nS~~CGtC~~lty~g~si~vlaID~a~-----------------~gfnis~~A~n~LT~g~a~~lG  103 (119)
T PF07249_consen   43 PYIGGAPAVAGW--NSPNCGTCWKLTYNGRSIYVLAIDHAG-----------------GGFNISLDAMNDLTNGQAVELG  103 (119)
T ss_dssp             TSEEEETT--ST--T-TTTT-EEEEEETTEEEEEEEEEE-S-----------------SSEEE-HHHHHHHHTS-CCCC-
T ss_pred             CeeccccccccC--CCCCCCCeEEEEECCeEEEEEEEecCC-----------------CcccchHHHHHHhcCCccccee
Confidence            3466665  355  468999999999999999999999852                 369999999999964  34589


Q ss_pred             EEEEEEEe
Q 048311          178 EMEIYWSD  185 (186)
Q Consensus       178 ~i~ItW~~  185 (186)
                      +|++++..
T Consensus       104 ~V~a~~~q  111 (119)
T PF07249_consen  104 RVDATYTQ  111 (119)
T ss_dssp             EEE-EEEE
T ss_pred             EEEEEEEE
Confidence            99999864

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=97.65  E-value=0.00016  Score=61.44  Aligned_cols=71  Identities=20%  Similarity=0.347  Sum_probs=59.3

Q ss_pred             CccEEEeeccccCC----CCCCccEEEEEeCCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCCCC
Q 048311          101 DEPVVALSTGWYNK----GSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK  176 (186)
Q Consensus       101 sd~VVALstg~~~~----~~~CGk~I~It~nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~~~  176 (186)
                      +.-|-||+....|-    ...-|..++|+....+.++.|.|.-             |.=..+.|||||.+|.++| +..+
T Consensus        55 d~eITAlNPaqlNlGGipAAmAGaYLrVqGPKG~TTVYVTDlY-------------PegasGaLDLSpNAFakIG-nm~q  120 (232)
T COG4305          55 DMEITALNPAQLNLGGIPAAMAGAYLRVQGPKGKTTVYVTDLY-------------PEGASGALDLSPNAFAKIG-NMKQ  120 (232)
T ss_pred             cceeeecCHHHcccCCchhhhccceEEEECCCCceEEEEeccc-------------ccccccccccChHHHhhhc-chhc
Confidence            45588999988883    3578999999995445568899988             5556789999999999999 8999


Q ss_pred             cEEEEEEEe
Q 048311          177 GEMEIYWSD  185 (186)
Q Consensus       177 G~i~ItW~~  185 (186)
                      |+|+|.|..
T Consensus       121 GrIpvqWrv  129 (232)
T COG4305         121 GRIPVQWRV  129 (232)
T ss_pred             CccceeEEE
Confidence            999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	186
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	8e-08

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score = 49.5 bits (118), Expect = 8e-08
 Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 20/104 (19%)

Query: 84  GGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSR----CLNYINIYGNGNSVKAKVVDEC 139
            G  GG           D  + A++    N G        +Y+ + G        V D  
Sbjct: 16  SGYSGGA--FLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEGPKGKTTVYVTDLY 73

Query: 140 DSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYW 183
                        P      +D S   +  +G     G++ I W
Sbjct: 74  -------------PEGARGALDLSPNAFRKIGNM-KDGKINIKW 103

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	186
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	99.79
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.63
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	99.62
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	99.51
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.49
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	98.83
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	97.56
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	97.44
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	97.24
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.19
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	97.12
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	97.1

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=99.79  E-value=2e-19  Score=150.10  Aligned_cols=83  Identities=18%  Similarity=0.266  Sum_probs=73.8

Q ss_pred             CCCCCCCCccCCCccEEEeeccccCCC----CCCccEEEEEeCCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCH
Q 048311           89 GPSECDNQYHSDDEPVVALSTGWYNKG----SRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASK  164 (186)
Q Consensus        89 g~gaCg~~~~sdsd~VVALstg~~~~~----~~CGk~I~It~nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~  164 (186)
                      ..||||......++++|||++.+|+++    +.||++|+|+.++++|+|+|+|+|             |+|+.++||||+
T Consensus        19 ~~GACG~~~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~~gsv~V~v~D~C-------------P~C~~~~~DLS~   85 (208)
T 3d30_A           19 SGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEGPKGKTTVYVTDLY-------------PEGARGALDLSP   85 (208)
T ss_dssp             SSCTTCCCCCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEETTEEEEEEEEEEC-------------TTCCTTCEEECH
T ss_pred             CCCcCCCCCCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeCCCcEEEEEEECC-------------CCCCCCeEECCH
Confidence            457999432334689999999999976    799999999998889999999999             889999999999


Q ss_pred             HHHHHhCCCCCCcEEEEEEEe
Q 048311          165 AVWEALGVPQSKGEMEIYWSD  185 (186)
Q Consensus       165 avF~aLg~~~~~G~i~ItW~~  185 (186)
                      .||++|+ .++.|+++|+|++
T Consensus        86 ~aF~~la-~~~~G~i~v~~~~  105 (208)
T 3d30_A           86 NAFRKIG-NMKDGKINIKWRV  105 (208)
T ss_dssp             HHHHHHS-CGGGSSEEEEEEE
T ss_pred             HHHHHhc-ccCCCEEEEEEEE
Confidence            9999999 7899999999986

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.63  E-value=6.9e-17  Score=126.73  Aligned_cols=97  Identities=13%  Similarity=0.329  Sum_probs=74.7

Q ss_pred             cceeEEEecccccCCCC------CCCCCCCCCccCCCccEEEeecccc---------CCCCCCccEEEEEe--CCcEEEE
Q 048311           71 HTKATLTLNSFQKGGDG------GGPSECDNQYHSDDEPVVALSTGWY---------NKGSRCLNYINIYG--NGNSVKA  133 (186)
Q Consensus        71 ~t~a~lt~n~f~~g~dg------Gg~gaCg~~~~sdsd~VVALstg~~---------~~~~~CGk~I~It~--nGkSV~a  133 (186)
                      ......|++.|+..+-+      -..++|+ .++. +..+++++..+|         +++..||++|+|+.  |||+|+|
T Consensus         3 ~~~~~~ty~~y~~~~~~~~~~~~~~s~~C~-t~da-~~~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~nGksV~V   80 (125)
T 1bw3_A            3 ANDVRATYHYYRPAQNNWDLGAPAVSAYCA-TWDA-SKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPATGAQITA   80 (125)
T ss_dssp             EEEEEEECCCSSCGGGTTCTTSTTTCCTTH-HHHT-TSCHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETTTTEEEEE
T ss_pred             ccceEEEEEEecCCCcCcccccceeeEeee-cccC-CCceeEecCCCceEeccCCCCCCCcccCCEEEeEeCCCCCEEEE
Confidence            34567788888764333      1457899 4554 445677766655         46788999999997  6999999


Q ss_pred             EEeeeCCCCCCCCCCCCCCCCCCCCeeecC-HHHHHHhCCC---CCCcEEEEEEEe
Q 048311          134 KVVDECDSTMGCDSDHDYQPPCRNNIVDAS-KAVWEALGVP---QSKGEMEIYWSD  185 (186)
Q Consensus       134 ~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS-~avF~aLg~~---~~~G~i~ItW~~  185 (186)
                      +|||+|             |+|   .|||| +++|++|+.+   .+.|+++|+|+|
T Consensus        81 ~VvD~C-------------P~g---gLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~  120 (125)
T 1bw3_A           81 RIVDQC-------------ANG---GLDLDWDTVFTKIDTNGIGYQQGHLNVNYQF  120 (125)
T ss_dssp             EEEECC-------------SSS---SCCSCSSSSHHHHCSSCHHHHHSEEEEEEEE
T ss_pred             EEEEeC-------------CCC---CCCCCCHHHHHHHhccCCcccCcEEEEEEEE
Confidence            999999             555   39999 9999999932   568999999987

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=99.62  E-value=1.4e-15  Score=130.02  Aligned_cols=84  Identities=17%  Similarity=0.231  Sum_probs=69.9

Q ss_pred             CCCCCCCcc---CCCccEEEeeccccCCCCCCccEEEEEeC------CcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCee
Q 048311           90 PSECDNQYH---SDDEPVVALSTGWYNKGSRCLNYINIYGN------GNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIV  160 (186)
Q Consensus        90 ~gaCg~~~~---sdsd~VVALstg~~~~~~~CGk~I~It~n------GkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~L  160 (186)
                      .||||....   ..+.+++||++.+|+++..||++++|+..      +++|+++|+|+|+    |        ++..+||
T Consensus        39 gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~~sv~V~VtD~C~----C--------~~~~~hf  106 (245)
T 2hcz_X           39 GGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMNY----E--------PIAPYHF  106 (245)
T ss_dssp             CCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCSSCEEEEEEEECC----C--------TTSSSEE
T ss_pred             CccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCCCCEEEEEEeccC----C--------CCCCccE
Confidence            489983321   12689999999999999999999999974      7899999999992    2        1156899


Q ss_pred             ecCHHHHHHhCCC------CCCcEEEEEEEe
Q 048311          161 DASKAVWEALGVP------QSKGEMEIYWSD  185 (186)
Q Consensus       161 DLS~avF~aLg~~------~~~G~i~ItW~~  185 (186)
                      |||+.||++|+.+      ...|+|+|+|+.
T Consensus       107 DLS~~AF~~iA~~g~~~~L~~~Gii~V~yrr  137 (245)
T 2hcz_X          107 DLSGKAFGSLAKPGLNDKIRHCGIMDVEFRR  137 (245)
T ss_dssp             EECHHHHHHTBCTTCHHHHTTTCCEEEEEEE
T ss_pred             EcCHHHHHHHhccccccccccCCEEEEEEEE
Confidence            9999999999943      689999999975

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=99.51  E-value=2.4e-14  Score=122.29  Aligned_cols=84  Identities=19%  Similarity=0.272  Sum_probs=68.8

Q ss_pred             CCCCCCCc-c--CCCccEEEeeccccCCCCCCccEEEEEeC------CcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCee
Q 048311           90 PSECDNQY-H--SDDEPVVALSTGWYNKGSRCLNYINIYGN------GNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIV  160 (186)
Q Consensus        90 ~gaCg~~~-~--sdsd~VVALstg~~~~~~~CGk~I~It~n------GkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~L  160 (186)
                      .||||... .  ..+.+++||++.+|+++..||++++|+..      +++|+++|+|+|.    |       |+ ..+||
T Consensus        39 gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~~v~V~VtD~C~----C-------~~-~~~hf  106 (241)
T 1n10_A           39 GGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHITDDNE----E-------PI-APYHF  106 (241)
T ss_dssp             CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEEEEECS----S-------CS-SSSEE
T ss_pred             CeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCCCEEEEEeEecC----C-------CC-CCcce
Confidence            57998332 1  12568999999999999999999999974      7899999999992    2       11 35899


Q ss_pred             ecCHHHHHHhCCC------CCCcEEEEEEEe
Q 048311          161 DASKAVWEALGVP------QSKGEMEIYWSD  185 (186)
Q Consensus       161 DLS~avF~aLg~~------~~~G~i~ItW~~  185 (186)
                      |||+.||.+|+.+      ...|+|+|+|+.
T Consensus       107 DLS~~AF~~iA~~g~~~~L~~~Gii~V~yrr  137 (241)
T 1n10_A          107 DLSGHAFGAMAKKGDEQKLRSAGELELQFRR  137 (241)
T ss_dssp             EEEHHHHHTTBSTTCHHHHHTTCSEEEEEEE
T ss_pred             ecCHHHHHHhhccCcccccccCCEEEEEEEE
Confidence            9999999999943      678999999975

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.49  E-value=2.1e-13  Score=102.51  Aligned_cols=77  Identities=22%  Similarity=0.256  Sum_probs=68.0

Q ss_pred             CCCCCCCCCccCCCccEEEeeccccCCCCCCccEEEEEe--CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHH
Q 048311           88 GGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYG--NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKA  165 (186)
Q Consensus        88 Gg~gaCg~~~~sdsd~VVALstg~~~~~~~CGk~I~It~--nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~a  165 (186)
                      |..+|||+.|+ .++|.+|..+      -.||..|+|+.  |||+|+++|.|+|             |-|...+||||++
T Consensus        15 G~~TA~Ge~~~-~~~~tAAH~t------lP~gt~vrVtNl~nGksVvVrVnDRG-------------P~~~griIDLS~a   74 (95)
T 4avr_A           15 GLRTASGERYN-PNAMTAAHRT------LPFGARVRVTNLDNRRSVVVRINDRG-------------PFRRGRIIDVSRK   74 (95)
T ss_dssp             TSBCTTSCBCC-TTSCEEECSS------SCTTCEEEEEETTTCCEEEEEEEECC-------------CCSTTEEEEECHH
T ss_pred             CCCCCCccCcC-CCCCEEEcCC------CCCCcEEEEEECCCCcEEEEEEccCC-------------CCCCCCEEEeCHH
Confidence            78999996665 4889999875      26999999996  9999999999999             6677789999999


Q ss_pred             HHHHhCCCCCCcEEEEEEEe
Q 048311          166 VWEALGVPQSKGEMEIYWSD  185 (186)
Q Consensus       166 vF~aLg~~~~~G~i~ItW~~  185 (186)
                      +|++|+ ..+.|+++|+|+.
T Consensus        75 Aa~~Lg-~~~~G~~~V~ve~   93 (95)
T 4avr_A           75 AAEGLG-MIRSGVAPVRIES   93 (95)
T ss_dssp             HHHHHT-CTTTSCEEEEEEE
T ss_pred             HHHHhC-CcCCCEEEEEEEE
Confidence            999999 7889999999975

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=98.83  E-value=3.1e-09  Score=87.83  Aligned_cols=83  Identities=16%  Similarity=0.212  Sum_probs=61.8

Q ss_pred             CccEEEeeccccCCC------CCCccEEEEEe-------------CCcEEEEEEeeeCCC----CCCCCCC--CCCCCCC
Q 048311          101 DEPVVALSTGWYNKG------SRCLNYINIYG-------------NGNSVKAKVVDECDS----TMGCDSD--HDYQPPC  155 (186)
Q Consensus       101 sd~VVALstg~~~~~------~~CGk~I~It~-------------nGkSV~a~VVD~Cds----~~GCd~~--~~~~p~C  155 (186)
                      ..+++|||+.+|+++      ..||++++|+-             .|+||++||+|.||.    ..+|...  .+..-..
T Consensus        46 g~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~  125 (181)
T 1wc2_A           46 GSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKY  125 (181)
T ss_dssp             GSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTT
T ss_pred             cceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCCCCCeEEEEEecCCCCCCCCCCccCCCcccCccccc
Confidence            467999999999986      89999999992             478999999999983    2455421  0000001


Q ss_pred             C-CCeeecCHHHHHHhCCCCCCcEEEEEEEe
Q 048311          156 R-NNIVDASKAVWEALGVPQSKGEMEIYWSD  185 (186)
Q Consensus       156 ~-~n~LDLS~avF~aLg~~~~~G~i~ItW~~  185 (186)
                      . ..|+||++.+ .+|+ ....|+++|+|+.
T Consensus       126 G~~~HFDLs~pa-~~Ia-~~~~GivpV~yrr  154 (181)
T 1wc2_A          126 GYELHLDLENGR-SQVT-GMGWNNPETTWEV  154 (181)
T ss_dssp             SCSEEEEEECTT-STTG-GGTCSSEEEEEEE
T ss_pred             CccccccccchH-HHhh-hhcCCCceeEEEE
Confidence            1 3699999999 7777 5678999999974

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=97.56  E-value=0.00013  Score=56.62  Aligned_cols=55  Identities=15%  Similarity=0.165  Sum_probs=47.1

Q ss_pred             CCCCCccEEEEEeCCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCCC--CcEEEEEEEe
Q 048311          114 KGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQS--KGEMEIYWSD  185 (186)
Q Consensus       114 ~~~~CGk~I~It~nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~~--~G~i~ItW~~  185 (186)
                      |.+.||.+.+++++||+|.+..+|.=.                 ..+++|.++|+.|...+.  .|+|+++|..
T Consensus        56 ns~~CGtC~~lty~g~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G~a~~lG~V~a~~~~  112 (120)
T 3m3g_A           56 NSASCGTCWKLQYSGHTIYVLAVDHAA-----------------SGFNIALDAMNALTGGQAVQLGRVSATATQ  112 (120)
T ss_dssp             TCTTTTCEEEEEETTEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCHHHHCEEECEEEE
T ss_pred             CCCCCCceEEEEECCeEEEEEEEecCC-----------------CceeecHHHHHHhhCCcceeeeeEeEEEEE
Confidence            468999999999999999999999762                 469999999999974443  5999999864

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=97.44  E-value=0.00034  Score=55.03  Aligned_cols=66  Identities=15%  Similarity=0.204  Sum_probs=53.2

Q ss_pred             ccEEEeeccc-cCCCCCCccEEEEEe-CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCCCCcEE
Q 048311          102 EPVVALSTGW-YNKGSRCLNYINIYG-NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEM  179 (186)
Q Consensus       102 d~VVALstg~-~~~~~~CGk~I~It~-nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~~~G~i  179 (186)
                      -+|.+...-= || .+.||++.+|++ |||||.+..+|.=.                 +.+++++++|+.|......|+|
T Consensus        50 P~IGga~~iagWN-S~~CGtC~~lty~ng~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G~~lG~V  111 (129)
T 2kqa_A           50 PNVGGIPDIAGWD-SPSCGTCWKVTIPNGNSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGSTEAGRV  111 (129)
T ss_dssp             SSEEEETTCCSTT-CTTCSCEEEEEETTTEEEEEEEEEECS-----------------SSEEECHHHHHHHHSSSSSCCB
T ss_pred             CeeccchhhccCC-CCCCCceEEEEEcCCCEEEEEEEccCC-----------------CceeehHHHHHHhcCCcccCcE
Confidence            3455554332 44 799999999999 99999999999862                 4799999999999755778999


Q ss_pred             -EEEEEe
Q 048311          180 -EIYWSD  185 (186)
Q Consensus       180 -~ItW~~  185 (186)
                       +++|..
T Consensus       112 ~~a~~~q  118 (129)
T 2kqa_A          112 DNVNYVQ  118 (129)
T ss_dssp             CSCEEEE
T ss_pred             eEEEEEE
Confidence             888864

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=97.24  E-value=0.00073  Score=52.60  Aligned_cols=55  Identities=16%  Similarity=0.213  Sum_probs=47.0

Q ss_pred             CCCCCccEEEEEeC--CcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCCC--CcEEEEEEEe
Q 048311          114 KGSRCLNYINIYGN--GNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQS--KGEMEIYWSD  185 (186)
Q Consensus       114 ~~~~CGk~I~It~n--GkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~~--~G~i~ItW~~  185 (186)
                      +.+.||.+.+++++  ||+|.+..+|.=.                 ..++++.++|+.|.....  .|+|+++|..
T Consensus        56 nS~~CGtC~~lty~~~g~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~a~~lG~V~a~~~q  114 (122)
T 3sul_A           56 NSESCGTCYQITWSGTGKTIHVVGVDVAG-----------------NGFNVGQRAMDDLTNGQAVALGNIDVTATL  114 (122)
T ss_dssp             TCTTTTCEEEEEETTTTEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCHHHHSEEEEEEEE
T ss_pred             CCCCCCceEEEEEcCCCcEEEEEEEecCC-----------------CceeehHHHHHHhcCCcceecceEeEEEEE
Confidence            35999999999998  9999999999763                 369999999999975443  5999999864

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.19  E-value=0.00094  Score=52.90  Aligned_cols=65  Identities=17%  Similarity=0.170  Sum_probs=51.0

Q ss_pred             ccEEEeeccccCCCCCCccEEEEEeCCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCC------C
Q 048311          102 EPVVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQ------S  175 (186)
Q Consensus       102 d~VVALstg~~~~~~~CGk~I~It~nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~------~  175 (186)
                      -+|.+..   || ...||.+.+|+++||+|.+..||.=.               ..+-+++|.++|+.|....      .
T Consensus        48 P~igg~~---wn-s~~CGtCwkLtY~G~sI~vlaID~a~---------------~g~~FnIs~~Amn~LT~G~~a~~a~e  108 (136)
T 3sum_A           48 PHFVAAP---EA-QTECGSCWKLRYKGNHAFVTVVDRVE---------------EANLFVGGTDLVKNLTTFNGAPEGYD  108 (136)
T ss_dssp             TSEEECC---BT-TBCTTCEEEEEETTEEEEEEEEECCC---------------STTEEEECHHHHHHHTCBTTBCHHHH
T ss_pred             Ccccccc---cC-CCCCCceEEEEECCeEEEEEEEecCC---------------CcceEeehHHHHHHHhCCCcccccee
Confidence            3466666   44 68999999999999999999999762               1113999999999997434      2


Q ss_pred             CcEEEE-EEEe
Q 048311          176 KGEMEI-YWSD  185 (186)
Q Consensus       176 ~G~i~I-tW~~  185 (186)
                      .|+|++ +|+.
T Consensus       109 lG~Vda~~~~q  119 (136)
T 3sum_A          109 WGTAQLFSAYQ  119 (136)
T ss_dssp             HSEEECSEEEE
T ss_pred             cceeeeeEEEE
Confidence            599998 8864

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.12  E-value=0.00088  Score=52.48  Aligned_cols=55  Identities=15%  Similarity=0.187  Sum_probs=46.8

Q ss_pred             CCCCCccEEEEEeCC-----cEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCCC--CcEEEEEEEe
Q 048311          114 KGSRCLNYINIYGNG-----NSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQS--KGEMEIYWSD  185 (186)
Q Consensus       114 ~~~~CGk~I~It~nG-----kSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~~--~G~i~ItW~~  185 (186)
                      |.+.||.+.+++++|     |+|.+..+|.=.                 ..+++|.++|+.|.....  .|+|+++|..
T Consensus        56 ns~~CGtC~~lty~g~~~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~g~a~~lG~V~~~~~~  117 (127)
T 3suj_A           56 NSPNCGSCYQLTYSSAHTTPKSIYMVAIDRSA-----------------EGFTASKQAMDDLTNKRAEELGTVNVDVRK  117 (127)
T ss_dssp             TCTTTTCEEEEEECCSSSCCEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCHHHHSSEEEEEEE
T ss_pred             CCCCCCceEEEEECCCCCcceEEEEEEEecCC-----------------CceeecHHHHHHhcCCccccceeEEEEEEE
Confidence            468999999999998     999999999762                 359999999999975443  5999999864

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.10  E-value=0.00081  Score=52.53  Aligned_cols=66  Identities=18%  Similarity=0.216  Sum_probs=51.1

Q ss_pred             ccEEEeec-cccCCCCCCccEEEEEeCC----cEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecCHHHHHHhCCCC--
Q 048311          102 EPVVALST-GWYNKGSRCLNYINIYGNG----NSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQ--  174 (186)
Q Consensus       102 d~VVALst-g~~~~~~~CGk~I~It~nG----kSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS~avF~aLg~~~--  174 (186)
                      -+|.+... .=| |.+.||.+.+++++|    |+|.+..+|.=.                 ..++++.++|+.|....  
T Consensus        45 P~IGg~~~i~gw-nS~~CGtC~~lty~g~~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~a~  106 (125)
T 3suk_A           45 PHIGASSDIGGF-NSPACGNCYTISFTFQGVTRSINLVAIDHAG-----------------NGFNVAQAAMDELTNGNAV  106 (125)
T ss_dssp             TSEEEETTCCST-TCTTTTCEEEEEEEETTEEEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCHH
T ss_pred             CeeccccccccC-CCCCCCeeEEEEEcCCCcceEEEEEEEecCC-----------------CceeecHHHHHHhcCCccc
Confidence            34555542 113 368999999999999    999999999762                 35999999999997444  


Q ss_pred             CCcEEEEEEEe
Q 048311          175 SKGEMEIYWSD  185 (186)
Q Consensus       175 ~~G~i~ItW~~  185 (186)
                      ..|+|+++|..
T Consensus       107 ~lG~V~~~~~~  117 (125)
T 3suk_A          107 ALGTIDVQSQQ  117 (125)
T ss_dssp             HHCEEEEEEEE
T ss_pred             ccceEeEEEEE
Confidence            35999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	186
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	99.54
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.19
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.54

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.54  E-value=7.2e-15  Score=114.75  Aligned_cols=83  Identities=19%  Similarity=0.294  Sum_probs=68.7

Q ss_pred             CCCCCCCc---cCCCccEEEeeccccCCCCCCccEEEEEe------CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCee
Q 048311           90 PSECDNQY---HSDDEPVVALSTGWYNKGSRCLNYINIYG------NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIV  160 (186)
Q Consensus        90 ~gaCg~~~---~sdsd~VVALstg~~~~~~~CGk~I~It~------nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~L  160 (186)
                      .||||...   .....++|||++..|+++..||++++|+.      ++++|+++|+|.|+            .+|..+||
T Consensus        37 gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~~~~c~~~sv~V~vtd~c~------------~~~~~~hf  104 (143)
T d1n10a2          37 GGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHITDDNE------------EPIAPYHF  104 (143)
T ss_dssp             CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEEEEECS------------SCSSSSEE
T ss_pred             cccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCCCCcccCCCEEEEEEeccc------------CCCCCccc
Confidence            47998432   12247999999999999999999999996      26899999999994            45666899


Q ss_pred             ecCHHHHHHhCCCC-------CCcEEEEEEEe
Q 048311          161 DASKAVWEALGVPQ-------SKGEMEIYWSD  185 (186)
Q Consensus       161 DLS~avF~aLg~~~-------~~G~i~ItW~~  185 (186)
                      |||+.+|.+|+ +.       +.|+|+|+|..
T Consensus       105 DLS~~AF~~iA-~~~~~~~~~~~Giv~V~yRr  135 (143)
T d1n10a2         105 DLSGHAFGAMA-KKGDEQKLRSAGELELQFRR  135 (143)
T ss_dssp             EEEHHHHHTTB-STTCHHHHHTTCSEEEEEEE
T ss_pred             cCCHHHHhhhc-cccchhhheecCccceEEEE
Confidence            99999999999 43       46999999964

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.19  E-value=1.6e-11  Score=99.39  Aligned_cols=82  Identities=16%  Similarity=0.188  Sum_probs=62.1

Q ss_pred             ccEEEeeccccCC------CCCCccEEEEEe-------------CCcEEEEEEeeeCCC----CCCCCCC--CC-CCCCC
Q 048311          102 EPVVALSTGWYNK------GSRCLNYINIYG-------------NGNSVKAKVVDECDS----TMGCDSD--HD-YQPPC  155 (186)
Q Consensus       102 d~VVALstg~~~~------~~~CGk~I~It~-------------nGkSV~a~VVD~Cds----~~GCd~~--~~-~~p~C  155 (186)
                      .+++|||+.+|++      +..||++++|+-             .|+||++||+|.||-    ..+|...  .. -..-+
T Consensus        47 ~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~~~~~~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g  126 (180)
T d1wc2a1          47 SFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYG  126 (180)
T ss_dssp             SCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTS
T ss_pred             ceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccCCCCCCCCcEEEEEEecCCCCCCCCCccCCccccccccccC
Confidence            5799999999998      789999999982             478999999999973    2445310  00 01113


Q ss_pred             CCCeeecCHHHHHHhCCCCCCcEEEEEEEe
Q 048311          156 RNNIVDASKAVWEALGVPQSKGEMEIYWSD  185 (186)
Q Consensus       156 ~~n~LDLS~avF~aLg~~~~~G~i~ItW~~  185 (186)
                      ...|+|||+ +|.+|+ ....|+|+|+|+.
T Consensus       127 ~~~HFDLs~-af~~ia-~~~~G~v~V~yrr  154 (180)
T d1wc2a1         127 YELHLDLEN-GRSQVT-GMGWNNPETTWEV  154 (180)
T ss_dssp             CSEEEEEEC-TTSTTG-GGTCSSEEEEEEE
T ss_pred             cccceechH-HHHHHh-hhcCCcceeEEEE
Confidence            345999985 888888 7788999999974

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.54  E-value=4.5e-08  Score=74.18  Aligned_cols=55  Identities=18%  Similarity=0.489  Sum_probs=46.5

Q ss_pred             CCCCCccEEEEEe--CCcEEEEEEeeeCCCCCCCCCCCCCCCCCCCCeeecC-HHHHHHhCCCCC----CcEEEEEEEe
Q 048311          114 KGSRCLNYINIYG--NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDAS-KAVWEALGVPQS----KGEMEIYWSD  185 (186)
Q Consensus       114 ~~~~CGk~I~It~--nGkSV~a~VVD~Cds~~GCd~~~~~~p~C~~n~LDLS-~avF~aLg~~~~----~G~i~ItW~~  185 (186)
                      +.+.|||+++|+.  +|.+++++|||+|                .++.|||. +.||++|- ...    .|.+.|++.|
T Consensus        59 gq~sCGkclrvTN~atga~~~~RiVDqC----------------sngGlDLD~~~vFn~iD-tdG~G~~~Ghl~V~y~f  120 (125)
T d1bw3a_          59 GQAACGKCLRVTNPATGAQITARIVDQC----------------ANGGLDLDWDTVFTKID-TNGIGYQQGHLNVNYQF  120 (125)
T ss_dssp             SGGGTTCEEEEEETTTTEEEEEEEEECC----------------SSSSCCSCSSSSHHHHC-SSCHHHHHSEEEEEEEE
T ss_pred             CcccccceEEeeecccCcEEEEEEeecc----------------cCCCCccccHhhhheec-CCCcccccccEEEEEEE
Confidence            3568999999997  8999999999999                56789999 78999997 332    6888888776