Citrus Sinensis ID: 048503

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
AQNSQKLPFYNDNETPKSPISIIYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCLPDQGSSKINFGGIVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTNY
cccccccccccccccccccccccccccEEEcccEEEEEEEEcccccEEEEEEEcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEEEEEEEcccccccccccEEEEEcccccccccccccccEEEEcccccccHHHHHcccccccEEEEcccccccccEEcccccccccEEccccccccEEEEEEEEEEccEEEEEcccccccEEEEcccccEEccHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccccEEEEEEcccEEEEccccEEEEEcccEEEEEEEcccccEEEcccEEEEEEEEEEccccEEEEEccccccc
cccHHHHHHHccccccccccccccccHHHHHcHHHcEEEEEccccccEEEEEEccccccEccccccccHHHHHHccccccccccccEEEcccccccEEEEEccccccccEEEEEEccccEEEEEEEEEEEcEEEEcccccccEEEcccEEEEEccccccEEEEEccccHccccccHHHHHHHcccccccEEEEEEEcccccEEEEEcEcccccEEEEEEEcEEEEEEEEEEEEEccEEEEEEcccccEEEEEccccEccccHHHHHHHHHHHHHHHccccccccccccccccEEEEEccccccccEEEEEEccEEccccHHHEEEEccccEEEEcccccccEEEEcHHEHcEEEEEEEcccccEEEEccccccc
aqnsqklpfyndnetpkspisiiyqaeiisvdDIYLMHlsigtppvdifgsvdtgsdctwtqcepcpeldcfkqepplfdpkksstynsiscsssqcavvtsncsegdcsysflygrgayasfssgnlatetltfnstsglpvempnvifgcghknlasptsdskqtgiiglgpgnsslISQMgtsiagkfsyclpdqgsskinfggivagagvvstpliirdHYYLSLEAISVGNQrlefvssstgnifvdtGVLRTLLPLEYHSNLKSVMSNMikaqpvkgvgaepgfsdvlcynissqpkfpevtihfrgadvklspsnlfrnISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMvsfkpsrctny
aqnsqklpfyndnetpkspISIIYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCLPDQGSSKINFGGIVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMvsfkpsrctny
AQNSQKLPFYNDNETPKSPISIIYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKsstynsiscsssQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCLPDQGSSKINFGGIVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTNY
*******************ISIIYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQ***************ISCSSSQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKN************IIGLG****SLISQMGTSIAGKFSYCLPDQGSSKINFGGIVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSF********
******************************VDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDP**SSTYNSISCS***C**********DCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCLPDQGSSKINFGGIVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIK***********GFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN*
AQNSQKLPFYNDNETPKSPISIIYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKK********************CSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCLPDQGSSKINFGGIVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSF********
****QKLPFYND*ETPKSPISIIYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCLPDQGSSKINFGGIVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTN*
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oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
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AQNSQKLPFYNDNETPKSPISIIYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCLPDQGSSKINFGGIVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCTNY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query374 2.2.26 [Sep-21-2011]
Q6XBF8437 Aspartic proteinase CDR1 no no 0.895 0.766 0.468 5e-76
Q3EBM5447 Probable aspartic proteas no no 0.906 0.758 0.398 3e-63
Q766C3437 Aspartic proteinase nepen N/A no 0.877 0.750 0.344 2e-44
Q766C2438 Aspartic proteinase nepen N/A no 0.855 0.730 0.330 1e-41
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.842 0.63 0.310 1e-35
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.844 0.672 0.301 2e-31
Q9S9K4475 Aspartic proteinase-like no no 0.882 0.694 0.270 1e-25
Q9LZL3453 Aspartic proteinase PCS1 no no 0.815 0.673 0.286 1e-21
Q9LX20528 Aspartic proteinase-like no no 0.879 0.623 0.271 2e-14
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.855 0.780 0.226 5e-13
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  285 bits (728), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 172/367 (46%), Positives = 233/367 (63%), Gaps = 32/367 (8%)

Query: 25  QAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKS 84
           Q ++ S    YLM++SIGTPP  I    DTGSD  WTQC PC   DC+ Q  PLFDPK S
Sbjct: 80  QIDLTSNSGEYLMNVSIGTPPFPIMAIADTGSDLLWTQCAPCD--DCYTQVDPLFDPKTS 137

Query: 85  STYNSISCSSSQCAVV--TSNCSEGD--CSYSFLYGRGAYASFSSGNLATETLTFNSTSG 140
           STY  +SCSSSQC  +   ++CS  D  CSYS  YG  +Y   + GN+A +TLT  S+  
Sbjct: 138 STYKDVSCSSSQCTALENQASCSTNDNTCSYSLSYGDNSY---TKGNIAVDTLTLGSSDT 194

Query: 141 LPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCL----- 195
            P+++ N+I GCGH N    T + K +GI+GLG G  SLI Q+G SI GKFSYCL     
Sbjct: 195 RPMQLKNIIIGCGHNNAG--TFNKKGSGIVGLGGGPVSLIKQLGDSIDGKFSYCLVPLTS 252

Query: 196 -PDQGSSKINFG--GIVAGAGVVSTPLIIR----DHYYLSLEAISVGNQRLEFVSSSTG- 247
             DQ +SKINFG   IV+G+GVVSTPLI +      YYL+L++ISVG++++++  S +  
Sbjct: 253 KKDQ-TSKINFGTNAIVSGSGVVSTPLIAKASQETFYYLTLKSISVGSKQIQYSGSDSES 311

Query: 248 ---NIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKF 304
              NI +D+G   TLLP E++S L+  +++ I A+  K    + G S  LCY+ +   K 
Sbjct: 312 SEGNIIIDSGTTLTLLPTEFYSELEDAVASSIDAE--KKQDPQSGLS--LCYSATGDLKV 367

Query: 305 PEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMV 364
           P +T+HF GADVKL  SN F  +S++++C AFRG  +  +YG + Q+NFL+GYD     V
Sbjct: 368 PVITMHFDGADVKLDSSNAFVQVSEDLVCFAFRGSPSFSIYGNVAQMNFLVGYDTVSKTV 427

Query: 365 SFKPSRC 371
           SFKP+ C
Sbjct: 428 SFKPTDC 434
Involved in salicylic acid-dependent inducible resistance responses. May release an endogenous peptide elicitor required for the activation of inducible resistance mechanisms. Possesses protease activity in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query374
255566010439 Aspartic proteinase nepenthesin-1 precur 0.962 0.820 0.452 3e-82
224130878440 predicted protein [Populus trichocarpa] 0.946 0.804 0.425 4e-78
297805038440 predicted protein [Arabidopsis lyrata su 0.959 0.815 0.442 6e-77
15217764431 aspartyl protease-like protein [Arabidop 0.935 0.812 0.462 3e-76
15242803437 aspartyl protease family protein [Arabid 0.895 0.766 0.468 3e-74
357487631431 Aspartic proteinase nepenthesin-1 [Medic 0.871 0.756 0.441 4e-74
116831531438 unknown [Arabidopsis thaliana] 0.895 0.764 0.468 4e-74
224126551440 predicted protein [Populus trichocarpa] 0.893 0.759 0.451 1e-72
225427550439 PREDICTED: probable aspartic protease At 0.906 0.772 0.436 4e-71
357492389434 Aspartic proteinase nepenthesin-1 [Medic 0.877 0.755 0.441 1e-70
>gi|255566010|ref|XP_002523993.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223536720|gb|EEF38361.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  311 bits (798), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 187/413 (45%), Positives = 246/413 (59%), Gaps = 53/413 (12%)

Query: 2   QNSQKLPFYNDNETPKSPI-------------------SIIY----QAEIISVDDIYLMH 38
           ++S K PFYN  ETP   I                   S I+    Q+E+IS    YLM 
Sbjct: 36  RDSPKSPFYNPRETPTQRIVSAVRRSMSRVHHFSPTKNSDIFTDTAQSEMISNQGEYLMK 95

Query: 39  LSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCA 98
            S+GTP  DI    DTGSD  WTQC+PC +  C++Q+ PLFDPK SSTY  ISCS+ QC 
Sbjct: 96  FSLGTPAFDILAIADTGSDLIWTQCKPCDQ--CYEQDAPLFDPKSSSTYRDISCSTKQCD 153

Query: 99  VVTSNCS---EGD--CSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCG 153
           ++    S   EG+  C YS+ YG     SF+SGN+A +T+T  STSG PV +P  I GCG
Sbjct: 154 LLKEGASCSGEGNKTCHYSYSYGD---RSFTSGNVAADTITLGSTSGRPVLLPKAIIGCG 210

Query: 154 HKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCL-----PDQGSSKINFG-- 206
           H N  S T        +G GP   SLISQ+G++I GKFSYCL         SSK+NFG  
Sbjct: 211 HNNGGSFTEKGSGIVGLGGGP--ISLISQLGSTIDGKFSYCLVPLSSNATNSSKLNFGSN 268

Query: 207 GIVAGAGVVSTPLIIRD---HYYLSLEAISVGNQRLEFVSSS----TGNIFVDTGVLRTL 259
           GIV+G GV STPLI +D    Y+L+LEA+SVG++R++F  SS     GNI +D+G   TL
Sbjct: 269 GIVSGGGVQSTPLISKDPDTFYFLTLEAVSVGSERIKFPGSSFGTSEGNIIIDSGTTLTL 328

Query: 260 LPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLS 319
            P ++ S L S + + +   PV+    +P     LCY+I +  KFP +T HF GADVKL+
Sbjct: 329 FPEDFFSELSSAVQDAVAGTPVE----DPSGILSLCYSIDADLKFPSITAHFDGADVKLN 384

Query: 320 PSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCT 372
           P N F  +SD ++C AF   N+  ++G + Q+NFL+GYD+E   VSFKP+ CT
Sbjct: 385 PLNTFVQVSDTVLCFAFNPINSGAIFGNLAQMNFLVGYDLEGKTVSFKPTDCT 437

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224130878|ref|XP_002320947.1| predicted protein [Populus trichocarpa] gi|222861720|gb|EEE99262.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297805038|ref|XP_002870403.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316239|gb|EFH46662.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15217764|ref|NP_176663.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|5042418|gb|AAD38257.1|AC006193_13 Hypothetical Protein [Arabidopsis thaliana] gi|332196174|gb|AEE34295.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15242803|ref|NP_198319.1| aspartyl protease family protein [Arabidopsis thaliana] gi|75130158|sp|Q6XBF8.1|CDR1_ARATH RecName: Full=Aspartic proteinase CDR1; AltName: Full=Protein CONSTITUTIVE DISEASE RESISTANCE 1; Flags: Precursor gi|37935737|gb|AAP72988.1| CDR1 [Arabidopsis thaliana] gi|91806924|gb|ABE66189.1| aspartyl protease family protein [Arabidopsis thaliana] gi|109946613|gb|ABG48485.1| At5g33340 [Arabidopsis thaliana] gi|332006513|gb|AED93896.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357487631|ref|XP_003614103.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355515438|gb|AES97061.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|116831531|gb|ABK28718.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224126551|ref|XP_002329582.1| predicted protein [Populus trichocarpa] gi|222870291|gb|EEF07422.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225427550|ref|XP_002266461.1| PREDICTED: probable aspartic protease At2g35615 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357492389|ref|XP_003616483.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355517818|gb|AES99441.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query374
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.935 0.812 0.441 5.9e-78
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.895 0.766 0.452 2e-77
TAIR|locus:504955954447 AT2G35615 [Arabidopsis thalian 0.572 0.478 0.425 2.9e-70
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.577 0.485 0.400 7.8e-62
TAIR|locus:2057831396 AT2G28010 [Arabidopsis thalian 0.692 0.654 0.392 5.4e-59
TAIR|locus:2062809756 AT2G28220 [Arabidopsis thalian 0.855 0.423 0.343 1.4e-46
TAIR|locus:2046228395 AT2G28040 [Arabidopsis thalian 0.756 0.716 0.365 7.3e-43
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.858 0.696 0.350 9.3e-43
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.852 0.638 0.310 1.3e-38
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.839 0.650 0.317 4.3e-38
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 761 (272.9 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
 Identities = 169/383 (44%), Positives = 237/383 (61%)

Query:     7 LPFYNDNETPKSPISIIYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPC 66
             L F ND+ +P SP     Q+ I S    YLM++SIGTPPV I    DTGSD  WTQC PC
Sbjct:    63 LQFSNDDASPNSP-----QSFITSNRGEYLMNISIGTPPVPILAIADTGSDLIWTQCNPC 117

Query:    67 PELDCFKQEPPLFDPKKXXXXXXXXXXXXQC-AVVTSNCS--EGDCSYSFLYGRGAYASF 123
                DC++Q  PLFDPK+            QC A+  ++CS  E  CSY+  YG  +Y   
Sbjct:   118 E--DCYQQTSPLFDPKESSTYRKVSCSSSQCRALEDASCSTDENTCSYTITYGDNSY--- 172

Query:   124 SSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQM 183
             + G++A +T+T  S+   PV + N+I GCGH+N    T D   +GIIGLG G++SL+SQ+
Sbjct:   173 TKGDVAVDTVTMGSSGRRPVSLRNMIIGCGHENTG--TFDPAGSGIIGLGGGSTSLVSQL 230

Query:   184 GTSIAGKFSYCL-P---DQG-SSKINFG--GIVAGAGVVSTPLIIRD---HYYLSLEAIS 233
               SI GKFSYCL P   + G +SKINFG  GIV+G GVVST ++ +D   +Y+L+LEAIS
Sbjct:   231 RKSINGKFSYCLVPFTSETGLTSKINFGTNGIVSGDGVVSTSMVKKDPATYYFLNLEAIS 290

Query:   234 VGNQRLEFVSS----STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPG 289
             VG+++++F S+      GNI +D+G   TLLP  ++  L+SV+++ IKA+ V+    +P 
Sbjct:   291 VGSKKIQFTSTIFGTGEGNIVIDSGTTLTLLPSNFYYELESVVASTIKAERVQ----DPD 346

Query:   290 FSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIM 349
                 LCY  SS  K P++T+HF+G DVKL   N F  +S+++ C AF       ++G + 
Sbjct:   347 GILSLCYRDSSSFKVPDITVHFKGGDVKLGNLNTFVAVSEDVSCFAFAANEQLTIFGNLA 406

Query:   350 QINFLIGYDIEQAMVSFKPSRCT 372
             Q+NFL+GYD     VSFK + C+
Sbjct:   407 QMNFLVGYDTVSGTVSFKKTDCS 429
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057831 AT2G28010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062809 AT2G28220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046228 AT2G28040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691
3rd Layer3.4.23.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query374
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-133
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 4e-65
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 2e-46
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 3e-35
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-19
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 5e-13
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 9e-13
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 1e-12
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 9e-12
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 1e-08
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 6e-07
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 4e-06
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 1e-05
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 3e-04
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  387 bits (997), Expect = e-133
 Identities = 195/409 (47%), Positives = 249/409 (60%), Gaps = 53/409 (12%)

Query: 4   SQKLPFYNDNETP----------------------KSPISIIYQAEIISVDDIYLMHLSI 41
           S K PFYN +ETP                       SP     Q+++IS    YLM++SI
Sbjct: 34  SPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDASPNDP--QSDLISNGGEYLMNISI 91

Query: 42  GTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQC---A 98
           GTPPV I    DTGSD  WTQC+PC   DC+KQ  PLFDPKKSSTY  +SC SSQC    
Sbjct: 92  GTPPVPILAIADTGSDLIWTQCKPCD--DCYKQVSPLFDPKKSSTYKDVSCDSSQCQALG 149

Query: 99  VVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLA 158
              S   E  C+YS+ YG G   SF+ GNLA ETLT  STSG PV  P ++FGCGH N  
Sbjct: 150 NQASCSDENTCTYSYSYGDG---SFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNN-- 204

Query: 159 SPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCL-----PDQGSSKINFG--GIVAG 211
             T D K +GI+GLG G  SLISQ+G+SI GKFSYCL        G+SKINFG   IV+G
Sbjct: 205 GGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPLSSDSNGTSKINFGTNAIVSG 264

Query: 212 AGVVSTPLIIRD---HYYLSLEAISVGNQRLEFVSSS-----TGNIFVDTGVLRTLLPLE 263
           +GVVSTPL+ +D    YYL+LEAISVG+++L +  SS      GNI +D+G   TLLP +
Sbjct: 265 SGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTLLPSD 324

Query: 264 YHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNL 323
           ++S L+S +   I  + V     +   S  LCY+ +S  K P +T HF GADVKL P N 
Sbjct: 325 FYSELESAVEEAIGGERVS--DPQGLLS--LCYSSTSDIKLPIITAHFTGADVKLQPLNT 380

Query: 324 FRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQAMVSFKPSRCT 372
           F  +S++++C A    ++  ++G + Q+NFL+GYD+E   VSFKP+ CT
Sbjct: 381 FVKVSEDLVCFAMIPTSSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCT 429

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 374
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.94
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.88
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.87
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.17
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.36
PF1365090 Asp_protease_2: Aspartyl protease 97.02
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.72
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.53
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 95.52
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 94.46
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 93.65
COG3577215 Predicted aspartyl protease [General function pred 92.76
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 92.54
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 91.72
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 89.3
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 85.99
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 84.5
PF1365090 Asp_protease_2: Aspartyl protease 83.39
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 80.4
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.6e-60  Score=466.24  Aligned_cols=362  Identities=53%  Similarity=0.933  Sum_probs=299.4

Q ss_pred             CCCCCCCCCCCCCCCCCccccc--------------------cccceeeeeCceEEEEEEecCCCceEEEEEEcCCCcee
Q 048503            1 AQNSQKLPFYNDNETPKSPISI--------------------IYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTW   60 (374)
Q Consensus         1 ~~~~~~~p~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~tw   60 (374)
                      ||+++++|++.+..+..+++++                    .....+..++++|+++|.||||+|++.|++||||+++|
T Consensus        31 h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~W  110 (431)
T PLN03146         31 HRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDASPNDPQSDLISNGGEYLMNISIGTPPVPILAIADTGSDLIW  110 (431)
T ss_pred             eCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccccCCccccCcccCCccEEEEEEcCCCCceEEEEECCCCCcce
Confidence            8999999988665444433332                    11223445678999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCC--CCC-CCCCCeeeeEeCCCCCceeeEEEEEEEEEEEec
Q 048503           61 TQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVT--SNC-SEGDCSYSFLYGRGAYASFSSGNLATETLTFNS  137 (374)
Q Consensus        61 v~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~--~~c-~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~  137 (374)
                      |+|.+|.  .|..+.++.|||++|+|++...|.++.|....  ..| .++.|.|.+.|++|   +.+.|.+++|+|.|++
T Consensus       111 v~C~~C~--~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~i~Ygdg---s~~~G~l~~Dtltlg~  185 (431)
T PLN03146        111 TQCKPCD--DCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDG---SFTKGNLAVETLTIGS  185 (431)
T ss_pred             EcCCCCc--ccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeEEEeCCC---CceeeEEEEEEEEecc
Confidence            9999998  89767788999999999999999999997655  237 44579999999999   8778999999999988


Q ss_pred             CCCCceecCcEEEeeeecCCCCCCCCCCcceEeecCCCCChhhhhhhccccCcceecccCC-----CcceEEEcC--CCC
Q 048503          138 TSGLPVEMPNVIFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTSIAGKFSYCLPDQ-----GSSKINFGG--IVA  210 (374)
Q Consensus       138 ~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ql~~~~~~~Fs~~l~~~-----~~G~l~~Gg--~~~  210 (374)
                      ..++.+.++++.|||+....+  .|....+||||||+...++++|++....++||+||.+.     ..|.|+||+  .+.
T Consensus       186 ~~~~~~~v~~~~FGc~~~~~g--~f~~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~  263 (431)
T PLN03146        186 TSGRPVSFPGIVFGCGHNNGG--TFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPLSSDSNGTSKINFGTNAIVS  263 (431)
T ss_pred             CCCCcceeCCEEEeCCCCCCC--CccCCCceeEecCCCCccHHHHhhHhhCCcEEEECCCCCCCCCCcceEEeCCccccC
Confidence            655556789999999998776  56446899999999999999999876667999999642     379999999  444


Q ss_pred             CCCeeeeeeeeC---CceeEEEeEEEECCEEEEeeeC-----CCCcEEEecCcceeecChHHHHHHHHHHHhhhccCccc
Q 048503          211 GAGVVSTPLIIR---DHYYLSLEAISVGNQRLEFVSS-----STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVK  282 (374)
Q Consensus       211 ~~~l~~~p~~~~---~~w~v~l~~i~v~~~~~~~~~~-----~~~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~  282 (374)
                      +..+.|+|++..   .+|.|.+++|+||++.+..+..     ....++|||||++++||+++|++|.+++.++++.....
T Consensus       264 ~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~  343 (431)
T PLN03146        264 GSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVS  343 (431)
T ss_pred             CCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeCCccceecCHHHHHHHHHHHHHHhccccCC
Confidence            446899999853   4899999999999998765311     12479999999999999999999999999888643332


Q ss_pred             CCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEeCCCeEEEEEEcCCCceeecccceeeeEEEEECCCC
Q 048503          283 GVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNISDEIMCSAFRGGNANIVYGRIMQINFLIGYDIEQA  362 (374)
Q Consensus       283 ~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~~i~~~~~~~iLG~~fl~~~y~vfD~e~~  362 (374)
                      .    ......+|+.......+|.|+|+|+|.++.|+|++|++...++..|+++......||||..|||++|++||.+++
T Consensus       344 ~----~~~~~~~C~~~~~~~~~P~i~~~F~Ga~~~l~~~~~~~~~~~~~~Cl~~~~~~~~~IlG~~~q~~~~vvyDl~~~  419 (431)
T PLN03146        344 D----PQGLLSLCYSSTSDIKLPIITAHFTGADVKLQPLNTFVKVSEDLVCFAMIPTSSIAIFGNLAQMNFLVGYDLESK  419 (431)
T ss_pred             C----CCCCCCccccCCCCCCCCeEEEEECCCeeecCcceeEEEcCCCcEEEEEecCCCceEECeeeEeeEEEEEECCCC
Confidence            2    222367899754334789999999999999999999998877788999877667899999999999999999999


Q ss_pred             EEEEeeCCCCC
Q 048503          363 MVSFKPSRCTN  373 (374)
Q Consensus       363 rigfa~~~C~~  373 (374)
                      |||||+.+|..
T Consensus       420 ~igFa~~~C~~  430 (431)
T PLN03146        420 TVSFKPTDCTK  430 (431)
T ss_pred             EEeeecCCcCc
Confidence            99999999986

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query374
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 7e-07
1htr_B329 Crystal And Molecular Structures Of Human Progastri 1e-06
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 7e-06
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 2e-05
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 2e-05
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 6e-05
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 7e-05
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure 
Iteration: 1

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 111/278 (39%), Gaps = 36/278 (12%)
Query: 124 SSGNLATETLTFNSTSG-LPVEMPNV--IFGCGHKNLASPTSDSKQTGIIGLGPGNSSLI 180
           ++G+L       N+T G  PV   NV  +  C    L + +     TG+ GL     +L 
Sbjct: 95  AAGSLFHTRFAANTTDGNKPVSEVNVRVLAACAPSKLLA-SLPRGSTGVAGLAGSGLALP 153
Query: 181 SQMGTS--IAGKFSYCLPDQGSSKINFGGIVAGAGVVS-----TPLIIRD---HYYLSLE 230
           SQ+ ++  +  KF  CLP  G     FGG        +     TPL+ +     +Y+S  
Sbjct: 154 SQVASAQKVPNKFLLCLPTGGPGVAIFGGGPLPWPQFTQSMDYTPLVAKGGSPAHYISAR 213
Query: 231 AISVGNQRLEFVSS--STGNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEP 288
           +I V N R+       +TG + + T +   LL  + +  L    +  + AQP  G     
Sbjct: 214 SIKVENTRVPISERALATGGVMLSTRLPYVLLRRDVYRPLVDAFTKALAAQPANGAPVAR 273
Query: 289 GFSDV----LCYN---ISSQPK---FPEVTIHFR-GADVKLSPSNLFRNISDEIMCSAF- 336
               V    LCY+   + + P     P V +    G+D  ++  N   ++     C AF 
Sbjct: 274 AVKPVAPFELCYDTKTLGNNPGGYWVPNVLLELDGGSDWAMTGKNSMVDVKPGTACVAFV 333
Query: 337 --------RGGNANIVYGRIMQINFLIGYDIEQAMVSF 366
                    G    ++ G     +F++ +D+E+  + F
Sbjct: 334 EMKGVDAGDGSAPAVILGGAQMEDFVLDFDMEKKRLGF 371
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query374
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 6e-72
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 3e-64
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-61
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 1e-16
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 8e-16
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 2e-14
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 4e-14
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 4e-14
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 7e-14
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 4e-13
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 4e-13
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-13
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 6e-13
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 6e-13
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 6e-13
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-12
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 1e-12
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 2e-12
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 3e-12
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 4e-12
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 3e-11
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 5e-11
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 8e-11
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 2e-10
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 4e-10
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-09
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 3e-09
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 8e-09
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 1e-08
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 1e-08
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 1e-08
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 8e-06
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  228 bits (583), Expect = 6e-72
 Identities = 66/375 (17%), Positives = 113/375 (30%), Gaps = 46/375 (12%)

Query: 35  YLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSS 94
           +  +L   TP + +   VD   +  W  CE          + P     + S  N+  C S
Sbjct: 23  HWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQY--SSKTYQAPFCHSTQCSRANTHQCLS 80

Query: 95  SQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGL------PVEMPNV 148
              A             S             G L  + L  ++T G        V +P  
Sbjct: 81  CPAASRPGCHKNTCGLMSTNPITQ---QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQF 137

Query: 149 IFGCGHKNLASPTSDSKQTGIIGLGPGNSSLISQMGTS--IAGKFSYCLPDQ--GSSKIN 204
           +F C    L          G+ GLG    SL +Q+ +   +  +F+ CL         I 
Sbjct: 138 LFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAII 197

Query: 205 FGGIVAGAGVVSTPLIIRD------------HYYLSLEAISVGNQRLEFVSSST------ 246
           FG             I  D             Y + + +I +    +  ++  +      
Sbjct: 198 FGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGS 257

Query: 247 --GNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKF 304
             G   + T     +L    +     V +  +  Q    V +   F   LC+N +    +
Sbjct: 258 TSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQ--VKSVAPFG--LCFNSNKINAY 313

Query: 305 PEVTIHFR---GADVKLSPSNLFRNISDEIMCSAFRGGNAN----IVYGRIMQINFLIGY 357
           P V +      G   ++S  +L       + C     G       I  G       L+ +
Sbjct: 314 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVF 373

Query: 358 DIEQAMVSFKPSRCT 372
           D+ ++ V F  S   
Sbjct: 374 DLARSRVGFSTSSLH 388
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query374
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.86
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.71
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.38
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.19
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 93.66
2hs1_A99 HIV-1 protease; ultra-high resolution active site 87.97
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 87.74
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 86.78
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 85.82
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 81.24
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
Probab=100.00  E-value=2.1e-57  Score=436.82  Aligned_cols=302  Identities=24%  Similarity=0.378  Sum_probs=257.9

Q ss_pred             cccceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCC
Q 048503           23 IYQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTS  102 (374)
Q Consensus        23 ~~~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~  102 (374)
                      ..+++.++.+.+|+++|+||||||+|+|+|||||+++||++..|....|  ..++.|||++|+|++...           
T Consensus        46 ~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C--~~~~~y~~~~SsT~~~~~-----------  112 (370)
T 3psg_A           46 GDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLAC--SDHNQFNPDDSSTFEATS-----------  112 (370)
T ss_dssp             CCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-----------
T ss_pred             ceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCccc--CCCCCCCCccCcCcEECC-----------
Confidence            3467778899999999999999999999999999999999999986688  678899999999999987           


Q ss_pred             CCCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh---
Q 048503          103 NCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS---  178 (374)
Q Consensus       103 ~c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s---  178 (374)
                            +.|.+.|++|   + +.|.+++|+|++++     +.++++.||++...... .| ...++||||||+...+   
T Consensus       113 ------~~~~i~Yg~G---s-~~G~~~~Dtv~ig~-----~~v~~~~Fg~a~~~~~~-~~~~~~~dGIlGLg~~~~s~~~  176 (370)
T 3psg_A          113 ------QELSITYGTG---S-MTGILGYDTVQVGG-----ISDTNQIFGLSETEPGS-FLYYAPFDGILGLAYPSISASG  176 (370)
T ss_dssp             ------EEEEEESSSC---E-EEEEEEEEEEEETT-----EEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGCGGG
T ss_pred             ------cEEEEEeCCc---e-EEEEEEEEEEeeCC-----cccCCeEEEEEEeeccc-ccccCCccceeccCCccccccC
Confidence                  8999999999   7 57999999999999     99999999999988652 34 6788999999998654   


Q ss_pred             ---hhhhhh---ccccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCC
Q 048503          179 ---LISQMG---TSIAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSST  246 (374)
Q Consensus       179 ---~~~ql~---~~~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~  246 (374)
                         ++.+|.   .+.+++||+||.+.  ..|.|+|||    ++.+ ++.|+|+....+|.|.+++|.|+++.+..  ...
T Consensus       177 ~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g-~l~~~pv~~~~~w~v~l~~i~v~g~~~~~--~~~  253 (370)
T 3psg_A          177 ATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTG-SLNWVPVSVEGYWQITLDSITMDGETIAC--SGG  253 (370)
T ss_dssp             CCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSS-CCEEEECSEETTEEEEECEEESSSSEEEC--TTC
T ss_pred             CCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCC-cceeecccccceeEEEEeEEEECCEEEec--CCC
Confidence               333443   34679999999885  579999999    4555 89999999999999999999999988763  567


Q ss_pred             CcEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEE
Q 048503          247 GNIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRN  326 (374)
Q Consensus       247 ~~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~  326 (374)
                      ..+++||||+++++|.+++++|.+++.+.    ....    +. +.++|+...   .+|+|+|+|+|.+++|++++|++.
T Consensus       254 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----~~~~----g~-~~v~C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~  321 (370)
T 3psg_A          254 CQAIVDTGTSLLTGPTSAIANIQSDIGAS----ENSD----GE-MVISCSSID---SLPDIVFTIDGVQYPLSPSAYILQ  321 (370)
T ss_dssp             EEEEECTTCCSEEEEHHHHHHHHHHTTCE----ECTT----CC-EECCGGGGG---GCCCEEEEETTEEEEECHHHHEEE
T ss_pred             ceEEEcCCCCcEECCHHHHHHHHHHhCCc----ccCC----Cc-EEEECCCcc---cCCcEEEEECCEEEEECHHHhccc
Confidence            89999999999999999999997776432    2222    33 388999876   799999999999999999999988


Q ss_pred             eCCCeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503          327 ISDEIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSR  370 (374)
Q Consensus       327 ~~~~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~  370 (374)
                       . +..|++ |...      +..||||.+|||++|+|||.+++|||||+++
T Consensus       322 -~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~  370 (370)
T 3psg_A          322 -D-DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             -C-SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             -C-CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence             3 346987 7652      2469999999999999999999999999985
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 374
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 6e-34
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 5e-28
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-27
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 5e-26
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 5e-24
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 3e-23
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 9e-23
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 2e-22
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 1e-21
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 1e-21
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 1e-21
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 7e-21
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-20
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-20
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 3e-20
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 4e-20
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 4e-19
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 1e-18
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 3e-18
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 3e-18
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 3e-17
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 6e-11
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  127 bits (318), Expect = 6e-34
 Identities = 69/378 (18%), Positives = 132/378 (34%), Gaps = 52/378 (13%)

Query: 35  YLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSS 94
           Y +    G   V     +D      W+ C+        +          ++ Y +  C +
Sbjct: 16  YTIPFHDGASLV-----LDVAGPLVWSTCDGGQ--PPAEIPCSSPTCLLANAYPAPGCPA 68

Query: 95  SQCAVVTSNCSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSG---LPVEMPNVIFG 151
             C   +    +   +Y +    G   + ++G+L+      N+T G   +      V+  
Sbjct: 69  PSCG--SDKHDKPCTAYPYNPVSG---ACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAA 123

Query: 152 CGHKNLASPTSDSKQTGIIGLGPGNSSLISQMG--TSIAGKFSYCLPDQGSSKINFGGIV 209
           C    L   +     TG+ GL     +L +Q+     +A +F  CLP  G     FGG  
Sbjct: 124 CAPSKL-LASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGP 182

Query: 210 AGAG-----VVSTPLIIRD---HYYLSLEAISVGNQRLEFVSS--STGNIFVDTGVLRTL 259
                    +  TPL+ +     +Y+S  +I VG+ R+       +TG + + T +   L
Sbjct: 183 VPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVL 242

Query: 260 LPLEYHSNLKSVMSNMIKAQPVKGVG----AEPGFSDVLCYNISSQ------PKFPEVTI 309
           L  + +  L    +  + AQ   G       E      +CY+  +          P V +
Sbjct: 243 LRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQL 302

Query: 310 HFR-GADVKLSPSNLFRNISDEIMCSAFRGGNAN---------IVYGRIMQINFLIGYDI 359
               G+D  ++  N   ++     C AF               ++ G     +F++ +D+
Sbjct: 303 GLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDM 362

Query: 360 EQAMVSF----KPSRCTN 373
           E+  + F      + C  
Sbjct: 363 EKKRLGFSRLPHFTGCGG 380
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query374
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d4fiva_113 Feline immunodeficiency virus (FIV) protease {Feli 82.98
d2nmza199 Human immunodeficiency virus type 1 protease {Huma 82.49
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 81.89
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=7.4e-53  Score=403.66  Aligned_cols=301  Identities=24%  Similarity=0.378  Sum_probs=253.2

Q ss_pred             ccceeeeeCceEEEEEEecCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCcCCCCCCC
Q 048503           24 YQAEIISVDDIYLMHLSIGTPPVDIFGSVDTGSDCTWTQCEPCPELDCFKQEPPLFDPKKSSTYNSISCSSSQCAVVTSN  103 (374)
Q Consensus        24 ~~~~~~~~~~~y~~~v~iGtP~Q~~~~~iDTgS~~twv~~~~c~~~~C~~~~~~~y~~~~Sst~~~~~c~~~~c~~~~~~  103 (374)
                      .+++.++.+.+|+++|+||||+|+|.|+|||||+++||+|..|.  .|..+.++.|||++|+|++...            
T Consensus        47 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~--~~~~~~~~~yd~~~Sst~~~~~------------  112 (370)
T d3psga_          47 DEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS--SLACSDHNQFNPDDSSTFEATS------------  112 (370)
T ss_dssp             CCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC--SGGGTTSCCBCGGGCTTCEEEE------------
T ss_pred             ccccccccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCC--CcccccccccCCCcccccccCC------------
Confidence            35667778899999999999999999999999999999999998  5655788999999999999987            


Q ss_pred             CCCCCCeeeeEeCCCCCceeeEEEEEEEEEEEecCCCCceecCcEEEeeeecCCCCCCC-CCCcceEeecCCCCCh----
Q 048503          104 CSEGDCSYSFLYGRGAYASFSSGNLATETLTFNSTSGLPVEMPNVIFGCGHKNLASPTS-DSKQTGIIGLGPGNSS----  178 (374)
Q Consensus       104 c~~~~~~~~~~y~~g~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s----  178 (374)
                           +.|.+.|++|   +. .|.++.|++.+++     +.++++.||++...... .+ ..+.+||+|||+...+    
T Consensus       113 -----~~~~~~Yg~G---s~-~G~~~~d~~~~~~-----~~~~~~~f~~~~~~~~~-~~~~~~~~Gi~gl~~~~~~~~~~  177 (370)
T d3psga_         113 -----QELSITYGTG---SM-TGILGYDTVQVGG-----ISDTNQIFGLSETEPGS-FLYYAPFDGILGLAYPSISASGA  177 (370)
T ss_dssp             -----EEEEEESSSC---EE-EEEEEEEEEEETT-----EEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGCGGGC
T ss_pred             -----CcEEEEeCCc---eE-EEEEEEEEEeeec-----eeeeeeEEEEEeeccCc-eecccccccccccccCcccccCC
Confidence                 8999999999   75 5999999999999     89999999999988762 23 6788999999987543    


Q ss_pred             --hhhhh---hccccCcceecccCC--CcceEEEcC----CCCCCCeeeeeeeeCCceeEEEeEEEECCEEEEeeeCCCC
Q 048503          179 --LISQM---GTSIAGKFSYCLPDQ--GSSKINFGG----IVAGAGVVSTPLIIRDHYYLSLEAISVGNQRLEFVSSSTG  247 (374)
Q Consensus       179 --~~~ql---~~~~~~~Fs~~l~~~--~~G~l~~Gg----~~~~~~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~  247 (374)
                        +..++   +.+..++|++++.+.  ..|.|+|||    ++.+ ++.|+|+....+|.+.+.++.++++.+..  ....
T Consensus       178 ~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~-~l~~~p~~~~~~w~v~~~~i~v~g~~~~~--~~~~  254 (370)
T d3psga_         178 TPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTG-SLNWVPVSVEGYWQITLDSITMDGETIAC--SGGC  254 (370)
T ss_dssp             CCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSS-CCEEEECSEETTEEEEECEEESSSSEEEC--TTCE
T ss_pred             CchhhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhccc-ceeEEeecccceEEEEEeeEEeCCeEEec--CCCc
Confidence              33332   444789999999876  578999999    3444 89999999999999999999999988774  6678


Q ss_pred             cEEEecCcceeecChHHHHHHHHHHHhhhccCcccCCCCCCCccccceeeccCCCCCCeEEEEEeCceEEECCCceEEEe
Q 048503          248 NIFVDTGVLRTLLPLEYHSNLKSVMSNMIKAQPVKGVGAEPGFSDVLCYNISSQPKFPEVTIHFRGADVKLSPSNLFRNI  327 (374)
Q Consensus       248 ~~iiDTGt~~i~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~  327 (374)
                      .++|||||+++++|.+++++|.+++...    ....    +. +.++|+..+   .+|+|+|+|+|.++.|+|++|+++.
T Consensus       255 ~aiiDSGTs~~~lp~~~~~~i~~~l~~~----~~~~----~~-~~~~C~~~~---~~P~l~f~f~g~~~~l~~~~yi~~~  322 (370)
T d3psga_         255 QAIVDTGTSLLTGPTSAIANIQSDIGAS----ENSD----GE-MVISCSSID---SLPDIVFTIDGVQYPLSPSAYILQD  322 (370)
T ss_dssp             EEEECTTCCSEEEEHHHHHHHHHHTTCE----ECTT----CC-EECCGGGGG---GCCCEEEEETTEEEEECHHHHEEEC
T ss_pred             cEEEecCCceEeCCHHHHHHHHHHhCCe----eecC----Cc-EEEeccccC---CCceEEEEECCEEEEEChHHeEEEc
Confidence            9999999999999999999998776543    2222    33 378899876   7999999999999999999999875


Q ss_pred             CCCeEEEE-EEcC------CCceeecccceeeeEEEEECCCCEEEEeeCC
Q 048503          328 SDEIMCSA-FRGG------NANIVYGRIMQINFLIGYDIEQAMVSFKPSR  370 (374)
Q Consensus       328 ~~~~~C~~-i~~~------~~~~iLG~~fl~~~y~vfD~e~~rigfa~~~  370 (374)
                      .+  .|.. +...      ++.||||.+|||++|+|||.+++||||||++
T Consensus       323 ~~--~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         323 DD--SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             SS--CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             CC--eEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence            53  4755 5432      3679999999999999999999999999974
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure