Citrus Sinensis ID: 048624

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670---
MNPSNQSPNHTAEDESQAVVTRRIQRLSLHLMAPSAQNYDLCAVIWLYERKAQGDTRESVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF
ccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHHHHcHHHHHHccccHHHHHHHHHHHcccccccEEEEccccccccccccccEEEEcccccEEEEEccccccEEEEcccccccccEEEEEEEEEEcccccccccccccEEEEEEccccccccccccEEEEEccccccccccccEEEEEccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccc
ccccccccccccHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccEEEEEEEEEccccccccccEEEEEEcccccEEEEEccccccEEEccccccccccEEEEEEEEEEcccccccccccccEEEEEEccccccccccccEEEcccccccccccccccEEEEccEEccHHHHHHHHccccccccEEcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcHcccccHHHccccccEEccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccEcccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccccccccccHHHHHHHHHcc
mnpsnqspnhtaedesQAVVTRRIQRLSLHlmapsaqnydLCAVIWLYERkaqgdtresveyfnsrpdlqtpveiLKDDHRELCWRQLLGLVREagikpfkyvaedpAQYFAIAEAVGSVDMSLGIKMGVQyslwggsvinlgtkkhrdkyydgidnldypgcfamtelhhgsnvqglqtvatfdpikdefiintpndgaiKWWIGNAAVHGKFATVFAKLmlpthdskgysdmgvhafivpirdmkthqtlpgieihdcghkvglngvdngalrfcsvriprdnllnrfgdvsrdgkytsslpTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRqqfgpprkpevsiLDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREacgghgyaavnrfgslrndhdifqtfegdnTVLLQQVAGDLLKQYKekfqggpltvTWNYLRESMNaylsqpnpvtarwegeehlrdpkfqLDAFRYRTSRLLQSVAVRLRKHSktlgsfgawNRCLNHLLTLAESHIESVILAKFIEAVqncpdpssRAALKLVCDLYALNRiwndigtyrnvdyvapnkAKAIHKLTEYLSFQVRNIAGelidafdlpdyvtrapiarqsdAYAYYTQIVGF
mnpsnqspnhtaedesqaVVTRRIQRLSLHLMAPSAQNYDLCAVIWLYERKAQGDTRESveyfnsrpdlqtpvEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRiprdnllnrfgdvsrdgkytsslptINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHsktlgsfgawNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF
MNPSNQSPNHTAEDESQAVVTRRIQRLSLHLMAPSAQNYDLCAVIWLYERKAQGDTRESVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF
*******************VTRRIQRLSLHLMAPSAQNYDLCAVIWLYERKAQGD***SVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGP****EVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIV**
*************************************NYDLCAVIWLYERKAQGDTRESVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDG**********KRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQF******EVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYS*************VHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQY************WNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVA****************NRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF
********************TRRIQRLSLHLMAPSAQNYDLCAVIWLYERKAQGDTRESVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF
*********HTAEDESQAVVTRRIQRLSLHLMAPSAQNYDLCAVIWLYERKAQGDTRESVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MNPSNQSPNHTAEDESQAVVTRRIQRLSLHLMAPSAQNYDLCAVIWLYERKAQGDTRESVEYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query673 2.2.26 [Sep-21-2011]
O65201692 Acyl-coenzyme A oxidase 2 yes no 0.995 0.968 0.830 0.0
O64894690 Acyl-coenzyme A oxidase, N/A no 0.988 0.963 0.811 0.0
Q9DBS4632 Acyl-coenzyme A oxidase-l yes no 0.781 0.832 0.381 1e-95
P0CZ23675 Acyl-coenzyme A oxidase 3 no no 0.855 0.853 0.365 4e-94
Q9LMI7675 Putative acyl-coenzyme A no no 0.784 0.782 0.380 3e-93
Q9NUZ1547 Acyl-coenzyme A oxidase-l yes no 0.774 0.952 0.376 8e-93
Q5RAU0700 Peroxisomal acyl-coenzyme yes no 0.811 0.78 0.344 4e-87
O15254700 Peroxisomal acyl-coenzyme yes no 0.811 0.78 0.351 2e-86
Q9EPL9700 Peroxisomal acyl-coenzyme no no 0.852 0.82 0.343 2e-84
Q5RC19660 Peroxisomal acyl-coenzyme no no 0.775 0.790 0.352 2e-80
>sp|O65201|ACOX2_ARATH Acyl-coenzyme A oxidase 2, peroxisomal OS=Arabidopsis thaliana GN=ACX2 PE=1 SV=2 Back     alignment and function desciption
 Score = 1199 bits (3101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/690 (83%), Positives = 621/690 (90%), Gaps = 20/690 (2%)

Query: 4   SNQSPNHTAEDESQAVVT-RRIQRLSLHL---MAPSAQ----NYDLCAV----------- 44
           S +  N   E+ES  ++  RRIQRLSLHL   + PS        + C+            
Sbjct: 3   SRREKNPMTEEESDGLIAARRIQRLSLHLSPSLTPSPSLPLVQTETCSARSKKLDVNGEA 62

Query: 45  IWLYERKAQGDTRESV-EYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYV 103
           + LY R    D +E + ++FNSRPDLQTP+EI KDDHRELC  QL+GLVREAG++PF+YV
Sbjct: 63  LSLYMRGKHIDIQEKIFDFFNSRPDLQTPIEISKDDHRELCMNQLIGLVREAGVRPFRYV 122

Query: 104 AEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGC 163
           A+DP +YFAI EAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKY+DGIDNLDY GC
Sbjct: 123 ADDPEKYFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGC 182

Query: 164 FAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLML 223
           FAMTELHHGSNVQGLQT ATFDP+KDEF+I+TPNDGAIKWWIGNAAVHGKFATVFA+L+L
Sbjct: 183 FAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARLIL 242

Query: 224 PTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPR 283
           PTHDSKG SDMGVHAFIVPIRDMKTHQTLPG+EI DCGHKVGLNGVDNGALRF SVRIPR
Sbjct: 243 PTHDSKGVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGHKVGLNGVDNGALRFRSVRIPR 302

Query: 284 DNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYS 343
           DNLLNRFGDVSRDG YTSSLPTINKRF ATLGELVGGRVGLAY+SVGVLKI+ATIAIRYS
Sbjct: 303 DNLLNRFGDVSRDGTYTSSLPTINKRFGATLGELVGGRVGLAYASVGVLKISATIAIRYS 362

Query: 344 LLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVG 403
           LLRQQFGPP++PEVSILDYQSQQHKLMPMLASTYA+HFAT  LVEKYSEMKKTHDEQLV 
Sbjct: 363 LLRQQFGPPKQPEVSILDYQSQQHKLMPMLASTYAYHFATVYLVEKYSEMKKTHDEQLVA 422

Query: 404 DVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLL 463
           DVHALSAGLKSYVTSYTAK+LSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLL
Sbjct: 423 DVHALSAGLKSYVTSYTAKALSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLL 482

Query: 464 QQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDA 523
           QQVA DLLK+YKEKFQGG LTVTW+YLRESMN YLSQPNPVTARWEGE+HLRDPKFQLDA
Sbjct: 483 QQVAADLLKRYKEKFQGGTLTVTWSYLRESMNTYLSQPNPVTARWEGEDHLRDPKFQLDA 542

Query: 524 FRYRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCP 583
           FRYRTSRLLQ+VA RL+KHSKTLG FGAWNRCLNHLLTLAESHIE+VILAKFIEAV+NCP
Sbjct: 543 FRYRTSRLLQNVAARLQKHSKTLGGFGAWNRCLNHLLTLAESHIETVILAKFIEAVKNCP 602

Query: 584 DPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELI 643
           DPS++AALKL CDLYAL+RIW DIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRN+A EL+
Sbjct: 603 DPSAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNVAKELV 662

Query: 644 DAFDLPDYVTRAPIARQSDAYAYYTQIVGF 673
           DAF+LPD+VTRAPIA QSDAY+ YTQ+VGF
Sbjct: 663 DAFELPDHVTRAPIAMQSDAYSQYTQVVGF 692
Catalyzes the desaturation of long-chain acyl-CoAs to 2-trans-enoyl-CoAs. Active on substrates longer than C14 and mostly with C18-CoA. Activity on long-chain mono-unsaturated substrates is double than with the corresponding saturated substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 3EC: .EC: 6
>sp|O64894|ACOX2_CUCMA Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita maxima GN=Acx PE=1 SV=1 Back     alignment and function description
>sp|Q9DBS4|ACOXL_MOUSE Acyl-coenzyme A oxidase-like protein OS=Mus musculus GN=Acoxl PE=2 SV=1 Back     alignment and function description
>sp|P0CZ23|ACOX3_ARATH Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana GN=ACX3 PE=1 SV=1 Back     alignment and function description
>sp|Q9LMI7|ACO32_ARATH Putative acyl-coenzyme A oxidase 3.2, peroxisomal OS=Arabidopsis thaliana GN=ACX3.2 PE=3 SV=1 Back     alignment and function description
>sp|Q9NUZ1|ACOXL_HUMAN Acyl-coenzyme A oxidase-like protein OS=Homo sapiens GN=ACOXL PE=2 SV=3 Back     alignment and function description
>sp|Q5RAU0|ACOX3_PONAB Peroxisomal acyl-coenzyme A oxidase 3 OS=Pongo abelii GN=ACOX3 PE=2 SV=1 Back     alignment and function description
>sp|O15254|ACOX3_HUMAN Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2 Back     alignment and function description
>sp|Q9EPL9|ACOX3_MOUSE Peroxisomal acyl-coenzyme A oxidase 3 OS=Mus musculus GN=Acox3 PE=2 SV=2 Back     alignment and function description
>sp|Q5RC19|ACOX1_PONAB Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abelii GN=ACOX1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query673
402715752692 acyl-CoA oxidase 2 [Prunus persica] 0.989 0.962 0.844 0.0
297797531689 acyl-CoA oxidase [Arabidopsis lyrata sub 0.995 0.972 0.835 0.0
15238348692 acyl-coenzyme A oxidase 2 [Arabidopsis t 0.995 0.968 0.830 0.0
3044212692 acyl-CoA oxidase [Arabidopsis thaliana] 0.995 0.968 0.830 0.0
312282043688 unnamed protein product [Thellungiella h 0.977 0.956 0.846 0.0
224093772689 predicted protein [Populus trichocarpa] 0.995 0.972 0.823 0.0
359497188687 PREDICTED: acyl-coenzyme A oxidase, pero 0.994 0.973 0.829 0.0
356512717676 PREDICTED: acyl-coenzyme A oxidase 2, pe 0.980 0.976 0.837 0.0
224081166691 predicted protein [Populus trichocarpa] 0.995 0.969 0.809 0.0
62286587690 RecName: Full=Acyl-coenzyme A oxidase, p 0.988 0.963 0.811 0.0
>gi|402715752|gb|AFQ93694.1| acyl-CoA oxidase 2 [Prunus persica] Back     alignment and taxonomy information
 Score = 1204 bits (3115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/687 (84%), Positives = 624/687 (90%), Gaps = 21/687 (3%)

Query: 8   PNHTAEDESQAVVTRRIQRLSLHLMA--PSAQN----YDL----CAVIWL---------- 47
           P+ T EDESQ++  RRIQRLSLHL    P  +N    + L    CA   +          
Sbjct: 6   PDPTGEDESQSITNRRIQRLSLHLTPNYPQPKNDATHHQLQLLECAKAAMLKVDTDSLSN 65

Query: 48  YERKAQGDTRESV-EYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAED 106
           Y R    D ++ V +YFN+RPDLQTP+EILKDDHRELC RQL+ LVR+AGI+PF+YV ED
Sbjct: 66  YLRGKHKDIQDRVLDYFNNRPDLQTPLEILKDDHRELCMRQLVALVRDAGIRPFRYVIED 125

Query: 107 PAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAM 166
           PA+YFAI EAVGSVD+SL IKMGVQYSLWGGSV+NLGTKKH+DKY+DGIDN+DYPGCFAM
Sbjct: 126 PAKYFAILEAVGSVDVSLAIKMGVQYSLWGGSVLNLGTKKHKDKYFDGIDNMDYPGCFAM 185

Query: 167 TELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTH 226
           TELHHGSNVQGLQTVATFDP+ DEFII+TPNDGAIKWWIGNAAVHGKFATVFAKLMLPTH
Sbjct: 186 TELHHGSNVQGLQTVATFDPLTDEFIIDTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTH 245

Query: 227 DSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNL 286
           D+KG SDMGVHAFIVPIRD +TH+TLPGIEIHDCGHKVGLNGVDNGALRF SVRIPRDNL
Sbjct: 246 DTKGVSDMGVHAFIVPIRDFETHRTLPGIEIHDCGHKVGLNGVDNGALRFHSVRIPRDNL 305

Query: 287 LNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLR 346
           LNRFGDVSRDGKYTSSLP+INKRFAATLGELVGGRVGLAYSSV VLKIAA IAIRYSLLR
Sbjct: 306 LNRFGDVSRDGKYTSSLPSINKRFAATLGELVGGRVGLAYSSVSVLKIAAIIAIRYSLLR 365

Query: 347 QQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVH 406
           QQFGPP++PEV+ILDYQS QHKLMPMLASTYAFHFAT +LVEKY+EMKKTHDEQLVGDVH
Sbjct: 366 QQFGPPKQPEVTILDYQSHQHKLMPMLASTYAFHFATLHLVEKYAEMKKTHDEQLVGDVH 425

Query: 407 ALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQV 466
           +LSAGLK+YVT YTAKSLS+CREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQV
Sbjct: 426 SLSAGLKAYVTGYTAKSLSICREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQV 485

Query: 467 AGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRY 526
           AGDLLKQYKEKFQGG LTVTWNYLRESMN+YLSQPNPVTARWE E+HLRDPKFQLDAFRY
Sbjct: 486 AGDLLKQYKEKFQGGTLTVTWNYLRESMNSYLSQPNPVTARWESEDHLRDPKFQLDAFRY 545

Query: 527 RTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPS 586
           RTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILA FIE+VQNCPD S
Sbjct: 546 RTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILATFIESVQNCPDAS 605

Query: 587 SRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAF 646
           SRAALKLVCDLYAL RIW DIGTYRNVDYVAPNKAKAIHKL+EYLSF+VRNIA ELIDAF
Sbjct: 606 SRAALKLVCDLYALERIWKDIGTYRNVDYVAPNKAKAIHKLSEYLSFRVRNIARELIDAF 665

Query: 647 DLPDYVTRAPIARQSDAYAYYTQIVGF 673
           D+PD+VTRAPIA QSDAY++YTQ VGF
Sbjct: 666 DIPDHVTRAPIAMQSDAYSHYTQYVGF 692

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297797531|ref|XP_002866650.1| acyl-CoA oxidase [Arabidopsis lyrata subsp. lyrata] gi|297312485|gb|EFH42909.1| acyl-CoA oxidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15238348|ref|NP_201316.1| acyl-coenzyme A oxidase 2 [Arabidopsis thaliana] gi|62286588|sp|O65201.2|ACOX2_ARATH RecName: Full=Acyl-coenzyme A oxidase 2, peroxisomal; Short=AOX 2; AltName: Full=Long-chain acyl-CoA oxidase; Short=AtCX2; Flags: Precursor gi|10178173|dbj|BAB11647.1| acyl-CoA oxidase [Arabidopsis thaliana] gi|332010620|gb|AED98003.1| acyl-coenzyme A oxidase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3044212|gb|AAC13497.1| acyl-CoA oxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|312282043|dbj|BAJ33887.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|224093772|ref|XP_002309985.1| predicted protein [Populus trichocarpa] gi|222852888|gb|EEE90435.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359497188|ref|XP_002269650.2| PREDICTED: acyl-coenzyme A oxidase, peroxisomal [Vitis vinifera] gi|302144247|emb|CBI23497.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356512717|ref|XP_003525063.1| PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Glycine max] Back     alignment and taxonomy information
>gi|224081166|ref|XP_002306317.1| predicted protein [Populus trichocarpa] gi|222855766|gb|EEE93313.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|62286587|sp|O64894.1|ACOX2_CUCMA RecName: Full=Acyl-coenzyme A oxidase, peroxisomal; Short=AOX; AltName: Full=Long-chain acyl-CoA oxidase; Flags: Precursor gi|7431668|pir||T07901 acyl CoA oxidase homolog - cucurbit gi|3115374|gb|AAC15870.1| acyl CoA oxidase homolog [Cucurbita cv. Kurokawa Amakuri] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query673
TAIR|locus:2171825692 ACX2 "acyl-CoA oxidase 2" [Ara 0.931 0.906 0.883 2.50000000016e-314
DICTYBASE|DDB_G0286669667 DDB_G0286669 "acyl-CoA oxidase 0.870 0.878 0.408 1.5e-108
DICTYBASE|DDB_G0270990692 DDB_G0270990 "putative acyl-Co 0.839 0.816 0.409 3.2e-104
DICTYBASE|DDB_G0288735652 DDB_G0288735 "putative acyl-Co 0.579 0.598 0.461 5.3e-100
DICTYBASE|DDB_G0271340641 DDB_G0271340 "acyl-CoA oxidase 0.867 0.911 0.345 2.7e-93
UNIPROTKB|J9PB76659 ACOXL "Acyl-coenzyme A oxidase 0.805 0.822 0.395 4.5e-91
ZFIN|ZDB-GENE-081107-18652 acoxl "acyl-Coenzyme A oxidase 0.842 0.869 0.382 8.3e-90
ZFIN|ZDB-GENE-040426-2163692 acox3 "acyl-Coenzyme A oxidase 0.879 0.855 0.368 3.6e-89
RGD|1306814632 Acoxl "acyl-CoA oxidase-like" 0.797 0.849 0.381 3.2e-88
MGI|MGI:1921371632 Acoxl "acyl-Coenzyme A oxidase 0.794 0.846 0.380 6e-87
TAIR|locus:2171825 ACX2 "acyl-CoA oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2970 (1050.6 bits), Expect = 2.5e-314, Sum P(2) = 2.5e-314
 Identities = 555/628 (88%), Positives = 595/628 (94%)

Query:    47 LYERKAQGDTRESV-EYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAE 105
             LY R    D +E + ++FNSRPDLQTP+EI KDDHRELC  QL+GLVREAG++PF+YVA+
Sbjct:    65 LYMRGKHIDIQEKIFDFFNSRPDLQTPIEISKDDHRELCMNQLIGLVREAGVRPFRYVAD 124

Query:   106 DPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFA 165
             DP +YFAI EAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKY+DGIDNLDY GCFA
Sbjct:   125 DPEKYFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGCFA 184

Query:   166 MTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPT 225
             MTELHHGSNVQGLQT ATFDP+KDEF+I+TPNDGAIKWWIGNAAVHGKFATVFA+L+LPT
Sbjct:   185 MTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARLILPT 244

Query:   226 HDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDN 285
             HDSKG SDMGVHAFIVPIRDMKTHQTLPG+EI DCGHKVGLNGVDNGALRF SVRIPRDN
Sbjct:   245 HDSKGVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGHKVGLNGVDNGALRFRSVRIPRDN 304

Query:   286 LLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLL 345
             LLNRFGDVSRDG YTSSLPTINKRF ATLGELVGGRVGLAY+SVGVLKI+ATIAIRYSLL
Sbjct:   305 LLNRFGDVSRDGTYTSSLPTINKRFGATLGELVGGRVGLAYASVGVLKISATIAIRYSLL 364

Query:   346 RQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDV 405
             RQQFGPP++PEVSILDYQSQQHKLMPMLASTYA+HFAT  LVEKYSEMKKTHDEQLV DV
Sbjct:   365 RQQFGPPKQPEVSILDYQSQQHKLMPMLASTYAYHFATVYLVEKYSEMKKTHDEQLVADV 424

Query:   406 HALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQ 465
             HALSAGLKSYVTSYTAK+LSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQ
Sbjct:   425 HALSAGLKSYVTSYTAKALSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQ 484

Query:   466 VAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFR 525
             VA DLLK+YKEKFQGG LTVTW+YLRESMN YLSQPNPVTARWEGE+HLRDPKFQLDAFR
Sbjct:   485 VAADLLKRYKEKFQGGTLTVTWSYLRESMNTYLSQPNPVTARWEGEDHLRDPKFQLDAFR 544

Query:   526 YRTSRLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDP 585
             YRTSRLLQ+VA RL+KHSKTLG FGAWNRCLNHLLTLAESHIE+VILAKFIEAV+NCPDP
Sbjct:   545 YRTSRLLQNVAARLQKHSKTLGGFGAWNRCLNHLLTLAESHIETVILAKFIEAVKNCPDP 604

Query:   586 SSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDA 645
             S++AALKL CDLYAL+RIW DIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRN+A EL+DA
Sbjct:   605 SAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNVAKELVDA 664

Query:   646 FDLPDYVTRAPIARQSDAYAYYTQIVGF 673
             F+LPD+VTRAPIA QSDAY+ YTQ+VGF
Sbjct:   665 FELPDHVTRAPIAMQSDAYSQYTQVVGF 692
GO:0003995 "acyl-CoA dehydrogenase activity" evidence=IEA
GO:0003997 "acyl-CoA oxidase activity" evidence=IEA;ISS;IDA
GO:0005634 "nucleus" evidence=ISM
GO:0005777 "peroxisome" evidence=IEA;ISS
GO:0006631 "fatty acid metabolic process" evidence=IEA
GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISS;RCA;IDA
GO:0008152 "metabolic process" evidence=IEA
GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0001676 "long-chain fatty acid metabolic process" evidence=IDA
GO:0009062 "fatty acid catabolic process" evidence=RCA
GO:0009735 "response to cytokinin stimulus" evidence=RCA
GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0043248 "proteasome assembly" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
DICTYBASE|DDB_G0286669 DDB_G0286669 "acyl-CoA oxidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270990 DDB_G0270990 "putative acyl-CoA oxidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0288735 DDB_G0288735 "putative acyl-CoA oxidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271340 DDB_G0271340 "acyl-CoA oxidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|J9PB76 ACOXL "Acyl-coenzyme A oxidase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081107-18 acoxl "acyl-Coenzyme A oxidase-like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2163 acox3 "acyl-Coenzyme A oxidase 3, pristanoyl" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1306814 Acoxl "acyl-CoA oxidase-like" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1921371 Acoxl "acyl-Coenzyme A oxidase-like" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O64894ACOX2_CUCMA1, ., 3, ., 3, ., 60.81160.98810.9637N/Ano
O65201ACOX2_ARATH1, ., 3, ., 3, ., 60.83040.99550.9682yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.3.30.691
3rd Layer1.3.3.60.994

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
scaffold_803237.1
annotation not avaliable (689 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query673
PLN02636686 PLN02636, PLN02636, acyl-coenzyme A oxidase 0.0
cd01150610 cd01150, AXO, Peroxisomal acyl-CoA oxidase 0.0
PLN02312680 PLN02312, PLN02312, acyl-CoA oxidase 1e-140
PLN02443664 PLN02443, PLN02443, acyl-coenzyme A oxidase 4e-97
PTZ00460646 PTZ00460, PTZ00460, acyl-CoA dehydrogenase; Provis 6e-86
cd00567327 cd00567, ACAD, Acyl-CoA dehydrogenase 5e-43
COG1960393 COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid meta 3e-34
cd01158373 cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrog 3e-31
cd01161409 cd01161, VLCAD, Very long chain acyl-CoA dehydroge 6e-25
cd01151386 cd01151, GCD, Glutaryl-CoA dehydrogenase 5e-23
PLN02526412 PLN02526, PLN02526, acyl-coenzyme A oxidase 7e-18
pfam01756186 pfam01756, ACOX, Acyl-CoA oxidase 7e-18
cd01156376 cd01156, IVD, Isovaleryl-CoA dehydrogenase 1e-13
cd01160372 cd01160, LCAD, Long chain acyl-CoA dehydrogenase 7e-12
pfam0277052 pfam02770, Acyl-CoA_dh_M, Acyl-CoA dehydrogenase, 2e-10
cd01162375 cd01162, IBD, Isobutyryl-CoA dehydrogenase 3e-09
PLN02519404 PLN02519, PLN02519, isovaleryl-CoA dehydrogenase 1e-07
cd01153407 cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogena 2e-07
pfam00441150 pfam00441, Acyl-CoA_dh_1, Acyl-CoA dehydrogenase, 2e-06
cd01157378 cd01157, MCAD, Medium chain acyl-CoA dehydrogenase 8e-06
PTZ00461410 PTZ00461, PTZ00461, isovaleryl-CoA dehydrogenase; 8e-04
>gnl|CDD|215342 PLN02636, PLN02636, acyl-coenzyme A oxidase Back     alignment and domain information 
 Score = 1351 bits (3498), Expect = 0.0
 Identities = 570/684 (83%), Positives = 610/684 (89%), Gaps = 17/684 (2%)

Query: 6   QSPNHTAEDESQAVVTRRIQRLSLHLMA-----PSAQNYDLCA----------VIWLYER 50
           ++ N  AED+ + +  RRIQRLSLHL           +  +CA           + LY R
Sbjct: 4   KNQNPRAEDDGE-IAARRIQRLSLHLSPVPLPKEEQLSRLVCARSIKLSVNTEKLSLYMR 62

Query: 51  KAQGDTRESV-EYFNSRPDLQTPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQ 109
               D +E + E+FNSRPDLQTPVEI KD+HRELC RQL GLVREAGI+P KY+ EDPA+
Sbjct: 63  GKHRDIQEKIYEFFNSRPDLQTPVEISKDEHRELCMRQLTGLVREAGIRPMKYLVEDPAK 122

Query: 110 YFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTEL 169
           YFAI EAVGSVDMSLGIK+GVQYSLWGGSVINLGTKKHRDKY+DGIDNLDYPGCFAMTEL
Sbjct: 123 YFAITEAVGSVDMSLGIKLGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYPGCFAMTEL 182

Query: 170 HHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSK 229
           HHGSNVQGLQT ATFDP+ DEF+INTPNDGAIKWWIGNAAVHGKFATVFA+L LPTHDSK
Sbjct: 183 HHGSNVQGLQTTATFDPLTDEFVINTPNDGAIKWWIGNAAVHGKFATVFARLKLPTHDSK 242

Query: 230 GYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNR 289
           G SDMGVHAFIVPIRDMKTHQ LPG+EI DCGHKVGLNGVDNGALRF SVRIPRDNLLNR
Sbjct: 243 GVSDMGVHAFIVPIRDMKTHQVLPGVEIRDCGHKVGLNGVDNGALRFRSVRIPRDNLLNR 302

Query: 290 FGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQF 349
           FGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAY SVGVLK + TIAIRYSLLRQQF
Sbjct: 303 FGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYGSVGVLKASNTIAIRYSLLRQQF 362

Query: 350 GPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKTHDEQLVGDVHALS 409
           GPP++PE+SILDYQSQQHKLMPMLASTYAFHFAT  LVE+YSEMKKTHD+QLV DVHALS
Sbjct: 363 GPPKQPEISILDYQSQQHKLMPMLASTYAFHFATEYLVERYSEMKKTHDDQLVADVHALS 422

Query: 410 AGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGD 469
           AGLK+Y+TSYTAK+LS CREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVA D
Sbjct: 423 AGLKAYITSYTAKALSTCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAAD 482

Query: 470 LLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTS 529
           LLKQYKEKFQGG L+VTWNYLRESMN YLSQPNPVT RWEGEEHLRDPKFQLDAFRYRTS
Sbjct: 483 LLKQYKEKFQGGTLSVTWNYLRESMNTYLSQPNPVTTRWEGEEHLRDPKFQLDAFRYRTS 542

Query: 530 RLLQSVAVRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRA 589
           RLLQ+ A+RLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAV+ CPD S+RA
Sbjct: 543 RLLQTAALRLRKHSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVERCPDRSTRA 602

Query: 590 ALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLP 649
           ALKLVCDLYAL+RIW DIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRN+A EL+DAF LP
Sbjct: 603 ALKLVCDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNVAKELVDAFGLP 662

Query: 650 DYVTRAPIARQSDAYAYYTQIVGF 673
           D+VTRAPIA QS AY+ YTQ VGF
Sbjct: 663 DHVTRAPIAMQSGAYSEYTQYVGF 686

Length = 686
>gnl|CDD|173839 cd01150, AXO, Peroxisomal acyl-CoA oxidase Back     alignment and domain information
>gnl|CDD|215178 PLN02312, PLN02312, acyl-CoA oxidase Back     alignment and domain information
>gnl|CDD|178062 PLN02443, PLN02443, acyl-coenzyme A oxidase Back     alignment and domain information
>gnl|CDD|185639 PTZ00460, PTZ00460, acyl-CoA dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|173838 cd00567, ACAD, Acyl-CoA dehydrogenase Back     alignment and domain information
>gnl|CDD|224871 COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|173847 cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases Back     alignment and domain information
>gnl|CDD|173850 cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase Back     alignment and domain information
>gnl|CDD|173840 cd01151, GCD, Glutaryl-CoA dehydrogenase Back     alignment and domain information
>gnl|CDD|178141 PLN02526, PLN02526, acyl-coenzyme A oxidase Back     alignment and domain information
>gnl|CDD|201956 pfam01756, ACOX, Acyl-CoA oxidase Back     alignment and domain information
>gnl|CDD|173845 cd01156, IVD, Isovaleryl-CoA dehydrogenase Back     alignment and domain information
>gnl|CDD|173849 cd01160, LCAD, Long chain acyl-CoA dehydrogenase Back     alignment and domain information
>gnl|CDD|145755 pfam02770, Acyl-CoA_dh_M, Acyl-CoA dehydrogenase, middle domain Back     alignment and domain information
>gnl|CDD|173851 cd01162, IBD, Isobutyryl-CoA dehydrogenase Back     alignment and domain information
>gnl|CDD|215284 PLN02519, PLN02519, isovaleryl-CoA dehydrogenase Back     alignment and domain information
>gnl|CDD|173842 cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5 Back     alignment and domain information
>gnl|CDD|201229 pfam00441, Acyl-CoA_dh_1, Acyl-CoA dehydrogenase, C-terminal domain Back     alignment and domain information
>gnl|CDD|173846 cd01157, MCAD, Medium chain acyl-CoA dehydrogenase Back     alignment and domain information
>gnl|CDD|185640 PTZ00461, PTZ00461, isovaleryl-CoA dehydrogenase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 673
PLN02636686 acyl-coenzyme A oxidase 100.0
KOG0135661 consensus Pristanoyl-CoA/acyl-CoA oxidase [Lipid t 100.0
PLN02312680 acyl-CoA oxidase 100.0
KOG0136670 consensus Acyl-CoA oxidase [Lipid transport and me 100.0
cd01150610 AXO Peroxisomal acyl-CoA oxidase. Peroxisomal acyl 100.0
PTZ00460646 acyl-CoA dehydrogenase; Provisional 100.0
PLN02443664 acyl-coenzyme A oxidase 100.0
KOG0140408 consensus Medium-chain acyl-CoA dehydrogenase [Lip 100.0
KOG0141421 consensus Isovaleryl-CoA dehydrogenase [Amino acid 100.0
KOG0139398 consensus Short-chain acyl-CoA dehydrogenase [Lipi 100.0
cd01151386 GCD Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehyd 100.0
PRK09463 777 fadE acyl-CoA dehydrogenase; Reviewed 100.0
PRK03354380 crotonobetainyl-CoA dehydrogenase; Validated 100.0
cd01161409 VLCAD Very long chain acyl-CoA dehydrogenase. VLCA 100.0
PRK12341381 putative acyl-CoA dehydrogenase; Provisional 100.0
cd01162375 IBD Isobutyryl-CoA dehydrogenase. Isobutyryl-CoA d 100.0
TIGR03203378 pimD_small pimeloyl-CoA dehydrogenase, small subun 100.0
PLN02519404 isovaleryl-CoA dehydrogenase 100.0
PTZ00461410 isovaleryl-CoA dehydrogenase; Provisional 100.0
cd01157378 MCAD Medium chain acyl-CoA dehydrogenase. MCADs ar 100.0
PLN02526412 acyl-coenzyme A oxidase 100.0
cd01156376 IVD Isovaleryl-CoA dehydrogenase. Isovaleryl-CoA d 100.0
cd01160372 LCAD Long chain acyl-CoA dehydrogenase. LCAD is an 100.0
PRK13026 774 acyl-CoA dehydrogenase; Reviewed 100.0
TIGR03207372 cyc_hxne_CoA_dh cyclohexanecarboxyl-CoA dehydrogen 100.0
KOG0137634 consensus Very-long-chain acyl-CoA dehydrogenase [ 100.0
cd01158373 SCAD_SBCAD Short chain acyl-CoA dehydrogenases and 100.0
cd01155394 ACAD_FadE2 Acyl-CoA dehydrogenases similar to fadE 100.0
TIGR03204395 pimC_large pimeloyl-CoA dehydrogenase, large subun 100.0
KOG0138432 consensus Glutaryl-CoA dehydrogenase [Amino acid t 100.0
COG1960393 CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 100.0
PTZ00456622 acyl-CoA dehydrogenase; Provisional 100.0
PLN02876822 acyl-CoA dehydrogenase 100.0
cd01153407 ACAD_fadE5 Putative acyl-CoA dehydrogenases simila 100.0
cd01152380 ACAD_fadE6_17_26 Putative acyl-CoA dehydrogenases 100.0
cd01154418 AidB Proteins involved in DNA damage response, sim 100.0
PRK11561538 isovaleryl CoA dehydrogenase; Provisional 100.0
cd01163377 DszC Dibenzothiophene (DBT) desulfurization enzyme 100.0
cd00567327 ACAD Acyl-CoA dehydrogenase. Both mitochondrial ac 100.0
PTZ00457520 acyl-CoA dehydrogenase; Provisional 100.0
cd01159370 NcnH Naphthocyclinone hydroxylase. Naphthocyclinon 100.0
KOG1469392 consensus Predicted acyl-CoA dehydrogenase [Genera 100.0
PF01756187 ACOX: Acyl-CoA oxidase; InterPro: IPR002655 Acyl-C 100.0
PF00441150 Acyl-CoA_dh_1: Acyl-CoA dehydrogenase, C-terminal 99.86
TIGR02309477 HpaB-1 4-hydroxyphenylacetate 3-monooxygenase, oxy 99.86
PF08028134 Acyl-CoA_dh_2: Acyl-CoA dehydrogenase, C-terminal 99.4
PF0277052 Acyl-CoA_dh_M: Acyl-CoA dehydrogenase, middle doma 99.4
PF02771113 Acyl-CoA_dh_N: Acyl-CoA dehydrogenase, N-terminal 99.15
COG2368493 Aromatic ring hydroxylase [Secondary metabolites b 98.56
TIGR02310519 HpaB-2 4-hydroxyphenylacetate 3-monooxygenase, oxy 98.5
PF14749125 Acyl-CoA_ox_N: Acyl-coenzyme A oxidase N-terminal; 98.43
PF11794264 HpaB_N: 4-hydroxyphenylacetate 3-hydroxylase N ter 97.26
PF03241205 HpaB: 4-hydroxyphenylacetate 3-hydroxylase C termi 85.37
>PLN02636 acyl-coenzyme A oxidase Back     alignment and domain information 
Probab=100.00  E-value=5.8e-119  Score=1020.73  Aligned_cols=665  Identities=85%  Similarity=1.319  Sum_probs=599.7

Q ss_pred             CCCCcccccchHHHHHHHHHHHhhcCCCCcc-------------C-cC-chHhhhhhcCCCHHHHHH-HHHHHhcCCCCC
Q 048624            7 SPNHTAEDESQAVVTRRIQRLSLHLMAPSAQ-------------N-YD-LCAVIWLYERKAQGDTRE-SVEYFNSRPDLQ   70 (673)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~-~~~~m~~~l~~e~~~~~~-~~~~~~~~~~~~   70 (673)
                      +.++.+++..+ .++|||++++.||.+....             . .+ ++++|...+++++..+++ +++++.++|.|.
T Consensus         5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~l~~~~~~~r~~v~~~~~~~~~~~   83 (686)
T PLN02636          5 NQNPRAEDDGE-IAARRIQRLSLHLSPVPLPKEEQLSRLVCARSIKLSVNTEKLSLYMRGKHRDIQEKIYEFFNSRPDLQ   83 (686)
T ss_pred             ccCCccccchh-HHHHHHHHHHHhcCcCCCCCcccCCcccccccccCCCCHHHHHhhcCCcHHHHHHHHHHHHHhCcccc
Confidence            44556666666 6779999999998865421             1 11 667899999999988888 889999888774


Q ss_pred             CCccCCHHHHHHHHHHHHHHHHHHcCCCCccccCCCHHHHHHHHHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHh
Q 048624           71 TPVEILKDDHRELCWRQLLGLVREAGIKPFKYVAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDK  150 (673)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~l~e~Gl~~~~~p~~~~~~~~~~~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~  150 (673)
                      .+...++++.++.+.+++++.+.+.|++++.+|++++.++..+.|++++.|++++..+++|+++++++|..+||++|+++
T Consensus        84 ~~~~~~~~~~~e~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~d~s~~~~~~vh~~l~~~~I~~~GTeeQk~~  163 (686)
T PLN02636         84 TPVEISKDEHRELCMRQLTGLVREAGIRPMKYLVEDPAKYFAITEAVGSVDMSLGIKLGVQYSLWGGSVINLGTKKHRDK  163 (686)
T ss_pred             CCchhhHHHhhhhHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhhchhhHHHHHhhhhhHHHHHHHhCCHHHHHH
Confidence            45566677777777689999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             HHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEEEecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCC
Q 048624          151 YYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKG  230 (673)
Q Consensus       151 ~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~  230 (673)
                      |||++.+|+++||||+|||+||||+.+++|||++|+++|+|||||||++|+||||||++..||+++|+||++.++++..+
T Consensus       164 ~L~~~~~ge~ig~fA~TEpghGSdv~~leTtA~~d~~~defVLntP~~~g~K~wI~na~~~ad~~vV~Arl~~~~~~~~~  243 (686)
T PLN02636        164 YFDGIDNLDYPGCFAMTELHHGSNVQGLQTTATFDPLTDEFVINTPNDGAIKWWIGNAAVHGKFATVFARLKLPTHDSKG  243 (686)
T ss_pred             HHHHHhCCChhhhhhccCCCcccCcccCeeEEEEcCCCCeEEECCCCCCeEEEeecCCcccCCEEEEEEEecCCCCCccC
Confidence            99999999999999999999999999999999999888999999999999999999998459999999999754321111


Q ss_pred             CCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCceeEEecceecCcccccccCCcccCCCccccCCcccchHH
Q 048624          231 YSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRF  310 (673)
Q Consensus       231 ~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~  310 (673)
                      ++++|+++||||+|+.++|+++|||+|+++++|+|+++++|+.|.|||||||++||||++++|++||+|+++++++++||
T Consensus       244 ~~~~Gi~~FlVp~r~~~~~~~~PGV~v~~~~~K~G~~g~dng~l~FdnVrVP~~nlLg~~g~v~~~G~y~~~~~~~~~gf  323 (686)
T PLN02636        244 VSDMGVHAFIVPIRDMKTHQVLPGVEIRDCGHKVGLNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRF  323 (686)
T ss_pred             CCCCCeeEEEEecCccccCCCCCCeEeccCCCccCCCCCcceEEEEeeEEECHHHhccccccccCCCcccccCCCcchHH
Confidence            12459999999999999999999999999999999999999999999999999999999999999999999998889999


Q ss_pred             HHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048624          311 AATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKY  390 (673)
Q Consensus       311 ~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~  390 (673)
                      ..++..|..+|+.+++.++|++++|+++|++|+.+|+|||+|+++|.||++||.+|++|++|++.+++++++.+.+.+.+
T Consensus       324 ~~~~~~l~~~R~~iaa~a~g~a~~Al~iAvrYa~~R~qFg~p~~~e~~I~d~q~vQ~~La~~la~~~a~~~a~~~l~~~~  403 (686)
T PLN02636        324 AATLGELVGGRVGLAYGSVGVLKASNTIAIRYSLLRQQFGPPKQPEISILDYQSQQHKLMPMLASTYAFHFATEYLVERY  403 (686)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCEeCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHhccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHHHHHhCccCccCccchhccccccccccccCccHHHHHHHHHHHH
Q 048624          391 SEMKKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDL  470 (673)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~l  470 (673)
                      ++..+.++.....+.|..++++|+++++.+.+++++|+|+|||+||+.++++++++||+++.+|+||+|+|+++++|+.|
T Consensus       404 ~~~~~~~~~~~~~~~~~~as~aK~~~t~~a~~~~~~~rq~~GG~Gy~~~~~l~~l~rd~~~~~t~EG~n~Vl~~~iAr~l  483 (686)
T PLN02636        404 SEMKKTHDDQLVADVHALSAGLKAYITSYTAKALSTCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAADL  483 (686)
T ss_pred             HHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCcCcHHHHHHHhhhheeecChHHHHHHHHHHHH
Confidence            88776654333457899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCchhhHHHHHhhhhhhcCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchh
Q 048624          471 LKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKHSKTLGSFG  550 (673)
Q Consensus       471 l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~l~~~~~~~l~~~~~~~~~~~  550 (673)
                      |+.|++.++++++.+++.||.+.....+..+++....+....+|.|+++++++|++|+.++++.++.++++..++.+.++
T Consensus       484 l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~  563 (686)
T PLN02636        484 LKQYKEKFQGGTLSVTWNYLRESMNTYLSQPNPVTTRWEGEEHLRDPKFQLDAFRYRTSRLLQTAALRLRKHSKTLGSFG  563 (686)
T ss_pred             HHHHHHHhccCCCchHHHHHHhhhhhhhcccccccccccchhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Confidence            99999988888888899999765433333333332223345679999999999999999999999999987555566799


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHhhHhhhhccccccccCcCChhhHHHHHHHHHH
Q 048624          551 AWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEY  630 (673)
Q Consensus       551 a~n~~~~~~~~~a~A~~e~~~l~~f~~~i~~~~~~~~~~vL~~L~~Lyal~~i~~~~~~~~~~~~ls~~~~~~l~~~~~~  630 (673)
                      +||.|+++++++|+||+++++++.|+++|+++++++++++|++||.||+|+.|++|+|||+++||||++|++.|++.+.+
T Consensus       564 awn~~~~~l~~~a~ah~~~~~~~~f~~~v~~~~~~~~~~vL~~l~~Ly~l~~i~~~~g~fl~~~~l~~~~~~~i~~~i~~  643 (686)
T PLN02636        564 AWNRCLNHLLTLAESHIESVILAKFIEAVERCPDRSTRAALKLVCDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEY  643 (686)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhHHHHHHhHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998899999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhHHHhhhcCCCCcccccCcccc-CchHHHHHHHhhCC
Q 048624          631 LSFQVRNIAGELIDAFDLPDYVTRAPIAR-QSDAYAYYTQIVGF  673 (673)
Q Consensus       631 l~~~lrp~a~~Lvdaf~~pd~~l~s~i~~-dg~~Ye~~~~~~~~  673 (673)
                      ||.+|||||+.|||+|+|||++|+||||+ ||+ |..+-+.|||
T Consensus       644 l~~~lrp~av~LvDaF~~~d~~L~s~lg~~dg~-~~~~~~~~~~  686 (686)
T PLN02636        644 LSFQVRNVAKELVDAFGLPDHVTRAPIAMQSGA-YSEYTQYVGF  686 (686)
T ss_pred             HHHHHhHhHHHHhcccCCChhhhCcchhccCCc-HHHhhhhcCC
Confidence            99999999999999999999999999999 886 8889999998

>KOG0135 consensus Pristanoyl-CoA/acyl-CoA oxidase [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02312 acyl-CoA oxidase Back     alignment and domain information
>KOG0136 consensus Acyl-CoA oxidase [Lipid transport and metabolism] Back     alignment and domain information
>cd01150 AXO Peroxisomal acyl-CoA oxidase Back     alignment and domain information
>PTZ00460 acyl-CoA dehydrogenase; Provisional Back     alignment and domain information
>PLN02443 acyl-coenzyme A oxidase Back     alignment and domain information
>KOG0140 consensus Medium-chain acyl-CoA dehydrogenase [Lipid transport and metabolism] Back     alignment and domain information
>KOG0141 consensus Isovaleryl-CoA dehydrogenase [Amino acid transport and metabolism; Lipid transport and metabolism] Back     alignment and domain information
>KOG0139 consensus Short-chain acyl-CoA dehydrogenase [Lipid transport and metabolism] Back     alignment and domain information
>cd01151 GCD Glutaryl-CoA dehydrogenase Back     alignment and domain information
>PRK09463 fadE acyl-CoA dehydrogenase; Reviewed Back     alignment and domain information
>PRK03354 crotonobetainyl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd01161 VLCAD Very long chain acyl-CoA dehydrogenase Back     alignment and domain information
>PRK12341 putative acyl-CoA dehydrogenase; Provisional Back     alignment and domain information
>cd01162 IBD Isobutyryl-CoA dehydrogenase Back     alignment and domain information
>TIGR03203 pimD_small pimeloyl-CoA dehydrogenase, small subunit Back     alignment and domain information
>PLN02519 isovaleryl-CoA dehydrogenase Back     alignment and domain information
>PTZ00461 isovaleryl-CoA dehydrogenase; Provisional Back     alignment and domain information
>cd01157 MCAD Medium chain acyl-CoA dehydrogenase Back     alignment and domain information
>PLN02526 acyl-coenzyme A oxidase Back     alignment and domain information
>cd01156 IVD Isovaleryl-CoA dehydrogenase Back     alignment and domain information
>cd01160 LCAD Long chain acyl-CoA dehydrogenase Back     alignment and domain information
>PRK13026 acyl-CoA dehydrogenase; Reviewed Back     alignment and domain information
>TIGR03207 cyc_hxne_CoA_dh cyclohexanecarboxyl-CoA dehydrogenase Back     alignment and domain information
>KOG0137 consensus Very-long-chain acyl-CoA dehydrogenase [Lipid transport and metabolism] Back     alignment and domain information
>cd01158 SCAD_SBCAD Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases Back     alignment and domain information
>cd01155 ACAD_FadE2 Acyl-CoA dehydrogenases similar to fadE2 Back     alignment and domain information
>TIGR03204 pimC_large pimeloyl-CoA dehydrogenase, large subunit Back     alignment and domain information
>KOG0138 consensus Glutaryl-CoA dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>COG1960 CaiA Acyl-CoA dehydrogenases [Lipid metabolism] Back     alignment and domain information
>PTZ00456 acyl-CoA dehydrogenase; Provisional Back     alignment and domain information
>PLN02876 acyl-CoA dehydrogenase Back     alignment and domain information
>cd01153 ACAD_fadE5 Putative acyl-CoA dehydrogenases similar to fadE5 Back     alignment and domain information
>cd01152 ACAD_fadE6_17_26 Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26 Back     alignment and domain information
>cd01154 AidB Proteins involved in DNA damage response, similar to the AidB gene product Back     alignment and domain information
>PRK11561 isovaleryl CoA dehydrogenase; Provisional Back     alignment and domain information
>cd01163 DszC Dibenzothiophene (DBT) desulfurization enzyme C Back     alignment and domain information
>cd00567 ACAD Acyl-CoA dehydrogenase Back     alignment and domain information
>PTZ00457 acyl-CoA dehydrogenase; Provisional Back     alignment and domain information
>cd01159 NcnH Naphthocyclinone hydroxylase Back     alignment and domain information
>KOG1469 consensus Predicted acyl-CoA dehydrogenase [General function prediction only] Back     alignment and domain information
>PF01756 ACOX: Acyl-CoA oxidase; InterPro: IPR002655 Acyl-CoA oxidase (ACO) acts on CoA derivatives of fatty acids with chain lengths from 8 to 18 Back     alignment and domain information
>PF00441 Acyl-CoA_dh_1: Acyl-CoA dehydrogenase, C-terminal domain; InterPro: IPR006090 Mammalian Co-A dehydrogenases (1 Back     alignment and domain information
>TIGR02309 HpaB-1 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component Back     alignment and domain information
>PF08028 Acyl-CoA_dh_2: Acyl-CoA dehydrogenase, C-terminal domain; InterPro: IPR013107 Acyl Co-A dehydrogenases (1 Back     alignment and domain information
>PF02770 Acyl-CoA_dh_M: Acyl-CoA dehydrogenase, middle domain; InterPro: IPR006091 Acyl-CoA dehydrogenases (1 Back     alignment and domain information
>PF02771 Acyl-CoA_dh_N: Acyl-CoA dehydrogenase, N-terminal domain; InterPro: IPR006092 Mammalian Co-A dehydrogenases (1 Back     alignment and domain information
>COG2368 Aromatic ring hydroxylase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02310 HpaB-2 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component Back     alignment and domain information
>PF14749 Acyl-CoA_ox_N: Acyl-coenzyme A oxidase N-terminal; PDB: 2FON_A 1W07_B 1IS2_B 2DDH_A Back     alignment and domain information
>PF11794 HpaB_N: 4-hydroxyphenylacetate 3-hydroxylase N terminal; InterPro: IPR024674 This domain is found in the N terminus of HpaB, which encodes part of the 4-hydroxyphenylacetate 3-hydroxylase from Escherichia coli [] Back     alignment and domain information
>PF03241 HpaB: 4-hydroxyphenylacetate 3-hydroxylase C terminal; InterPro: IPR024719 This C-terminal domain is found in HpaB, which encodes part of the 4-hydroxyphenylacetate 3-hydroxylase from Escherichia coli [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query673
1is2_A661 Crystal Structure Of Peroxisomal Acyl-coa Oxidase-i 3e-73
1w07_A659 Arabidopsis Thaliana Acyl-Coa Oxidase 1 Length = 65 4e-71
2fon_A683 X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxid 4e-71
2vig_A391 Crystal Structure Of Human Short-Chain Acyl Coa Deh 4e-19
1jqi_A388 Crystal Structure Of Rat Short Chain Acyl-Coa Dehyd 1e-18
3b96_A587 Structural Basis For Substrate Fatty-Acyl Chain Spe 2e-17
2uxw_A607 Crystal Structure Of Human Very Long Chain Acyl-coa 2e-17
1buc_A383 Three-Dimensional Structure Of Butyryl-Coa Dehydrog 3e-16
2ix6_A449 Short Chain Specific Acyl-Coa Oxidase From Arabidop 5e-16
2ix5_A436 Short Chain Specific Acyl-Coa Oxidase From Arabidop 7e-16
2dvl_A372 Crystal Structure Of Project Tt0160 From Thermus Th 5e-13
2jif_A404 Structure Of Human Short-Branched Chain Acyl-Coa De 1e-11
2z1q_A577 Crystal Structure Of Acyl Coa Dehydrogenase Length 5e-11
3mpi_A397 Structure Of The Glutaryl-Coenzyme A Dehydrogenase 6e-11
3pfd_A393 Crystal Structure Of An Acyl-Coa Dehydrogenase From 9e-11
1ukw_A379 Crystal Structure Of Medium-Chain Acyl-Coa Dehydrog 1e-10
3owa_A597 Crystal Structure Of Acyl-Coa Dehydrogenase Complex 2e-10
3swo_A399 Crystal Structure Of A Glutaryl-Coa Dehydrogenase F 9e-09
3sf6_A403 Crystal Structure Of Glutaryl-Coa Dehydrogenase Fro 1e-08
1sir_A394 The Crystal Structure And Mechanism Of Human Glutar 1e-08
3eom_A396 2.4 A Crystal Structure Of Native Glutaryl-Coa Dehy 1e-08
3d6b_A395 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogena 1e-08
2r0m_A394 The Effect Of A Glu370asp Mutation In Glutaryl-Coa 1e-08
3gqt_A399 Crystal Structure Of Glutaryl-Coa Dehydrogenase Fro 1e-08
1siq_A392 The Crystal Structure And Mechanism Of Human Glutar 1e-08
3nf4_A387 Crystal Structure Of Acyl-Coa Dehydrogenase From My 2e-08
1ege_A396 Structure Of T255e, E376g Mutant Of Human Medium Ch 5e-08
2a1t_A421 Structure Of The Human Mcad:etf E165betaa Complex L 6e-08
1udy_A396 Medium-Chain Acyl-Coa Dehydrogenase With 3-Thiaocta 4e-07
1egd_A396 Structure Of T255e, E376g Mutant Of Human Medium Ch 5e-07
3mdd_A385 Crystal Structures Of Medium Chain Acyl-Coa Dehydro 5e-07
1ws9_A387 Crystal Structure Of Project Id Tt0172 From Thermus 6e-06
1ivh_A394 Structure Of Human Isovaleryl-coa Dehydrogenase At 7e-06
2eba_A385 Crystal Structure Of The Putative Glutaryl-coa Dehy 2e-05
1rx0_A393 Crystal Structure Of Isobutyryl-Coa Dehydrogenase C 4e-04
3r7k_A403 Crystal Structure Of A Probable Acyl Coa Dehydrogen 5e-04
>pdb|1IS2|A Chain A, Crystal Structure Of Peroxisomal Acyl-coa Oxidase-ii From Rat Liver Length = 661 Back     alignment and structure 
Iteration: 1

 Score =  273 bits (697), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 176/528 (33%), Positives = 285/528 (53%), Gaps = 20/528 (3%)
Query: 138 SVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPN 197
           ++++  T + +++++    NL+  G +A TE+ HG++++GL+T AT+DP   EFI+N+P 
Sbjct: 110 TLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPT 169
Query: 198 DGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEI 257
             +IKWW G        A V A+L+     ++G    G+HAF+VPIR++ TH+ LPGI +
Sbjct: 170 VTSIKWWPGGLGKTSNHAIVLAQLI-----TQGEC-YGLHAFVVPIREIGTHKPLPGITV 223
Query: 258 HDCGHKVGLNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGEL 317
            D G K G   +DNG L+  + RIPR+N+L ++  V  DG Y    P  NK    T G +
Sbjct: 224 GDIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVK--PLSNK---LTYGTM 278
Query: 318 VGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGPPR-KPEVSILDYQSQQHKLMPMLAST 376
           V  R  L  ++   L  A TIAIRYS +R+Q    + +PE  ILD+Q+QQ+KL P+LA+ 
Sbjct: 279 VFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATA 338
Query: 377 YAFHFATANLVEKYSEMKKT---HDEQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGG 433
           YAFHF    + E Y  + ++    D   + ++HAL+AGLK++ T      +  CR ACGG
Sbjct: 339 YAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGG 398
Query: 434 HGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRES 493
           HGY+  +   ++        TFEG+NTV++ Q A  L+K Y +   G  +    +YL + 
Sbjct: 399 HGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLND- 457
Query: 494 MNAYLSQPNPVTARWEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRKH-SKTLGSFGAW 552
           + +   QP  V A W     +   +   +A++ R +RL++  A  L+ H S       AW
Sbjct: 458 LPSQRIQPQQV-AVWPTMVDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAW 516
Query: 553 NRCLNHLLTLAESHIESVILAKFIEAVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRN 612
           N     L+  +E+H   V++  F + +    D + +A L+ +C LY+L  I    G +  
Sbjct: 517 NLTSVDLVRASEAHCHYVVVKVFSDKLPKIQDKAVQAVLRNLCLLYSLYGISQKGGDFLE 576
Query: 613 VDYVAPNKAKAIH-KLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIAR 659
              +   +   ++ ++ E L+  +R  A  L+DAFD  D    + + R
Sbjct: 577 GSIITGAQLSQVNARILELLTL-IRPNAVALVDAFDFKDMTLGSVLGR 623
>pdb|1W07|A Chain A, Arabidopsis Thaliana Acyl-Coa Oxidase 1 Length = 659 Back     alignment and structure
>pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase From Lycopersicon Esculentum (Tomato) Length = 683 Back     alignment and structure
>pdb|2VIG|A Chain A, Crystal Structure Of Human Short-Chain Acyl Coa Dehydrogenase Length = 391 Back     alignment and structure
>pdb|1JQI|A Chain A, Crystal Structure Of Rat Short Chain Acyl-Coa Dehydrogenase Complexed With Acetoacetyl-Coa Length = 388 Back     alignment and structure
>pdb|3B96|A Chain A, Structural Basis For Substrate Fatty-Acyl Chain Specificity: Crystal Structure Of Human Very-Long-Chain Acyl-Coa Dehydrogenase Length = 587 Back     alignment and structure
>pdb|2UXW|A Chain A, Crystal Structure Of Human Very Long Chain Acyl-coa Dehydrogenase (acadvl) Length = 607 Back     alignment and structure
>pdb|1BUC|A Chain A, Three-Dimensional Structure Of Butyryl-Coa Dehydrogenase From Megasphaera Elsdenii Length = 383 Back     alignment and structure
>pdb|2IX6|A Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis Thaliana, Acx4 Length = 449 Back     alignment and structure
>pdb|2IX5|A Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis Thaliana, Acx4 In Complex With Acetoacetyl-Coa Length = 436 Back     alignment and structure
>pdb|2DVL|A Chain A, Crystal Structure Of Project Tt0160 From Thermus Thermophilus Hb8 Length = 372 Back     alignment and structure
>pdb|2JIF|A Chain A, Structure Of Human Short-Branched Chain Acyl-Coa Dehydrogenase (Acadsb) Length = 404 Back     alignment and structure
>pdb|2Z1Q|A Chain A, Crystal Structure Of Acyl Coa Dehydrogenase Length = 577 Back     alignment and structure
>pdb|3MPI|A Chain A, Structure Of The Glutaryl-Coenzyme A Dehydrogenase Glutaryl-Coa Complex Length = 397 Back     alignment and structure
>pdb|3PFD|A Chain A, Crystal Structure Of An Acyl-Coa Dehydrogenase From Mycobacterium Thermoresistibile Bound To Reduced Flavin Adenine Dinucleotide Solved By Combined Iodide Ion Sad Mr Length = 393 Back     alignment and structure
>pdb|1UKW|A Chain A, Crystal Structure Of Medium-Chain Acyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 379 Back     alignment and structure
>pdb|3OWA|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With Fad From Bacillus Anthracis Length = 597 Back     alignment and structure
>pdb|3SWO|A Chain A, Crystal Structure Of A Glutaryl-Coa Dehydrogenase From Mycobacterium Smegmatis In Complex With Fadh2 Length = 399 Back     alignment and structure
>pdb|3SF6|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Mycobacterium Smegmatis Length = 403 Back     alignment and structure
>pdb|1SIR|A Chain A, The Crystal Structure And Mechanism Of Human Glutaryl-Coa Dehydrogenase Length = 394 Back     alignment and structure
>pdb|3EOM|A Chain A, 2.4 A Crystal Structure Of Native Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei Length = 396 Back     alignment and structure
>pdb|3D6B|A Chain A, 2.2 A Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei Length = 395 Back     alignment and structure
>pdb|2R0M|A Chain A, The Effect Of A Glu370asp Mutation In Glutaryl-Coa Dehydrogenase On Proton Transfer To The Dienolate Intermediate Length = 394 Back     alignment and structure
>pdb|3GQT|A Chain A, Crystal Structure Of Glutaryl-Coa Dehydrogenase From Burkholderia Pseudomallei With Fragment (1,4-Dimethyl-1,2,3,4- Tetrahydroquinoxalin-6-Yl)methylamine Length = 399 Back     alignment and structure
>pdb|1SIQ|A Chain A, The Crystal Structure And Mechanism Of Human Glutaryl-Coa Dehydrogenase Length = 392 Back     alignment and structure
>pdb|3NF4|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase From Mycobacterium Thermoresistibile Bound To Flavin Adenine Dinucleotide Length = 387 Back     alignment and structure
>pdb|1EGE|A Chain A, Structure Of T255e, E376g Mutant Of Human Medium Chain Acyl- Coa Dehydrogenase Length = 396 Back     alignment and structure
>pdb|2A1T|A Chain A, Structure Of The Human Mcad:etf E165betaa Complex Length = 421 Back     alignment and structure
>pdb|1UDY|A Chain A, Medium-Chain Acyl-Coa Dehydrogenase With 3-Thiaoctanoyl-Coa Length = 396 Back     alignment and structure
>pdb|1EGD|A Chain A, Structure Of T255e, E376g Mutant Of Human Medium Chain Acyl- Coa Dehydrogenase Length = 396 Back     alignment and structure
>pdb|3MDD|A Chain A, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase From Pig Liver Mitochondria With And Without Substrate Length = 385 Back     alignment and structure
>pdb|1WS9|A Chain A, Crystal Structure Of Project Id Tt0172 From Thermus Thermophilus Hb8 Length = 387 Back     alignment and structure
>pdb|1IVH|A Chain A, Structure Of Human Isovaleryl-coa Dehydrogenase At 2.6 Angstroms Resolution: Structural Basis For Substrate Specificity Length = 394 Back     alignment and structure
>pdb|2EBA|A Chain A, Crystal Structure Of The Putative Glutaryl-coa Dehydrogenase From Thermus Thermophilus Length = 385 Back     alignment and structure
>pdb|1RX0|A Chain A, Crystal Structure Of Isobutyryl-Coa Dehydrogenase Complexed With SubstrateLIGAND. Length = 393 Back     alignment and structure
>pdb|3R7K|A Chain A, Crystal Structure Of A Probable Acyl Coa Dehydrogenase From Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 403 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query673
2ddh_A661 Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundl 0.0
1w07_A659 Acyl-COA oxidase; oxidoreductase, peroxisomal beta 0.0
2uxw_A607 VERY-long-chain specific acyl-COA dehydrogenase; f 1e-41
3swo_A399 Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA d 1e-35
3sf6_A403 Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SB 2e-35
2ix5_A436 Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, 3e-35
1siq_A392 GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrog 4e-35
3owa_A597 Acyl-COA dehydrogenase; structural genomics, cente 1e-34
2d29_A387 Acyl-COA dehydrogenase; structural genomics, NPPSF 4e-34
3ii9_A396 Glutaryl-COA dehydrogenase; slipchip, microfluidic 5e-34
2z1q_A577 Acyl-COA dehydrogenase; FAD, structural genomics, 8e-34
2vig_A391 Short-chain specific acyl-COA dehydrogenase,; fatt 8e-34
2eba_A385 Putative glutaryl-COA dehydrogenase; thermus therm 2e-33
2jif_A404 Short/branched chain specific acyl-COA dehydrogen; 3e-33
2dvl_A372 Acyl-COA dehydrogenase; structural genomics, NPPSF 2e-32
1buc_A383 Butyryl-COA dehydrogenase; acyl-COA dehydrogenase 7e-32
3pfd_A393 Acyl-COA dehydrogenase; structural genomics, seatt 5e-31
1ivh_A394 Isovaleryl-COA dehydrogenase; oxidoreductase, acyl 6e-31
3mpi_A397 Glutaryl-COA dehydrogenase; alpha-beta fold, oxido 3e-30
3nf4_A387 Acyl-COA dehydrogenase; seattle structural genomic 4e-30
1egd_A396 Medium chain acyl-COA dehydrogenase; flavoprotein, 2e-29
1rx0_A393 Acyl-COA dehydrogenase family member 8, mitochondr 6e-28
1ukw_A379 Acyl-COA dehydrogenase; oxidoreductase, riken stru 6e-28
1r2j_A366 Protein FKBI; polyketide synthase, polyketide, acy 7e-28
3mkh_A438 Nitroalkane oxidase; oxidoreductase flavoenzyme, a 3e-27
2c12_A439 Nitroalkane oxidase; oxidoreductase, flavoenzyme, 3e-27
2pg0_A385 Acyl-COA dehydrogenase; GK1316, geobacillus kausto 1e-26
3p4t_A403 Putative acyl-COA dehydrogenase; ssgcid, structura 9e-26
3r7k_A403 Probable acyl COA dehydrogenase; ssgcid, structura 2e-25
3m9v_A439 FAD-dependent oxidoreductase; KIJD3, fatty acyl-CO 1e-23
3mxl_A395 Nitrososynthase; flavin monooxygenase, acyl-COA de 2e-21
2wbi_A428 Acyl-COA dehydrogenase family member 11; human, ph 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
3djl_A541 Protein AIDB; alpha helix, beta-barrel, FAD, flavo 1e-05
2jbr_A422 P-hydroxyphenylacetate hydroxylase C2 oxygenase C; 4e-05
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A* Length = 661 Back     alignment and structure
 Score =  626 bits (1615), Expect = 0.0
 Identities = 187/629 (29%), Positives = 305/629 (48%), Gaps = 29/629 (4%)

Query: 46  WLYERKAQGDTRESVE-YFNSRPDLQT-PVEIL-KDDHRELCWRQLLGLVREAGIKPFKY 102
            L         R  +E    + PD Q      L +    E+  ++   +V+    K  +Y
Sbjct: 22  ILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYEVAVKKSATMVK----KMREY 77

Query: 103 VAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPG 162
              DP +         SV       + +   ++  ++++  T + +++++    NL+  G
Sbjct: 78  GISDPEEIM---WFKNSVHRGHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITG 134

Query: 163 CFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLM 222
            +A TE+ HG++++GL+T AT+DP   EFI+N+P   +IKWW G        A V A+L 
Sbjct: 135 TYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL- 193

Query: 223 LPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIP 282
                ++G    G+HAF+VPIR++ TH+ LPGI + D G K G   +DNG L+  + RIP
Sbjct: 194 ----ITQG-ECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIP 248

Query: 283 RDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRY 342
           R+N+L ++  V  DG Y   L         T G +V  R  L  ++   L  A TIAIRY
Sbjct: 249 RENMLMKYAQVKPDGTYVKPLS-----NKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRY 303

Query: 343 SLLRQQFGPP-RKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEMKKT---HD 398
           S +R+Q      +PE  ILD+Q+QQ+KL P+LA+ YAFHF    + E Y  + ++    D
Sbjct: 304 SAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGD 363

Query: 399 EQLVGDVHALSAGLKSYVTSYTAKSLSVCREACGGHGYAAVNRFGSLRNDHDIFQTFEGD 458
              + ++HAL+AGLK++ T      +  CR ACGGHGY+  +   ++        TFEG+
Sbjct: 364 LSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGE 423

Query: 459 NTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTARWEGEEHLRDPK 518
           NTV++ Q A  L+K Y +   G  +    +YL +  +  +       A W     +   +
Sbjct: 424 NTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLNDLPSQRIQPQQV--AVWPTMVDINSLE 481

Query: 519 FQLDAFRYRTSRLLQSVAVRLRKH-SKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIE 577
              +A++ R +RL++  A  L+ H S       AWN     L+  +E+H   V++  F +
Sbjct: 482 GLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSD 541

Query: 578 AVQNCPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRN 637
            +    D + +A L+ +C LY+L  I    G +     +   +   ++     L   +R 
Sbjct: 542 KLPKIQDKAVQAVLRNLCLLYSLYGISQKGGDFLEGSIITGAQLSQVNARILELLTLIRP 601

Query: 638 IAGELIDAFDLPDYVTRAPIARQSDAYAY 666
            A  L+DAFD  D    + + R  D   Y
Sbjct: 602 NAVALVDAFDFKDMTLGSVLGR-YDGNVY 629
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A* Length = 659 Back     alignment and structure
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A* Length = 607 Back     alignment and structure
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis} Length = 399 Back     alignment and structure
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis} Length = 403 Back     alignment and structure
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A* Length = 436 Back     alignment and structure
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A* Length = 392 Back     alignment and structure
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis} Length = 597 Back     alignment and structure
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A* Length = 387 Back     alignment and structure
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A Length = 396 Back     alignment and structure
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus} Length = 577 Back     alignment and structure
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A* Length = 391 Back     alignment and structure
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus} Length = 385 Back     alignment and structure
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens} Length = 404 Back     alignment and structure
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus} Length = 372 Back     alignment and structure
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1 Length = 383 Back     alignment and structure
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile} Length = 393 Back     alignment and structure
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 Length = 394 Back     alignment and structure
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A* Length = 397 Back     alignment and structure
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile} Length = 387 Back     alignment and structure
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A* Length = 396 Back     alignment and structure
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 Length = 393 Back     alignment and structure
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 Length = 379 Back     alignment and structure
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1 Length = 366 Back     alignment and structure
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina} Length = 438 Back     alignment and structure
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A* Length = 439 Back     alignment and structure
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus} Length = 385 Back     alignment and structure
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A* Length = 403 Back     alignment and structure
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus} Length = 403 Back     alignment and structure
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata} Length = 439 Back     alignment and structure
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea} Length = 395 Back     alignment and structure
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens} Length = 428 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A* Length = 541 Back     alignment and structure
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A* Length = 422 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query673
2ddh_A661 Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundl 100.0
1w07_A659 Acyl-COA oxidase; oxidoreductase, peroxisomal beta 100.0
2z1q_A577 Acyl-COA dehydrogenase; FAD, structural genomics, 100.0
3owa_A597 Acyl-COA dehydrogenase; structural genomics, cente 100.0
1ukw_A379 Acyl-COA dehydrogenase; oxidoreductase, riken stru 100.0
2d29_A387 Acyl-COA dehydrogenase; structural genomics, NPPSF 100.0
2jif_A404 Short/branched chain specific acyl-COA dehydrogen; 100.0
2vig_A391 Short-chain specific acyl-COA dehydrogenase,; fatt 100.0
3pfd_A393 Acyl-COA dehydrogenase; structural genomics, seatt 100.0
3p4t_A403 Putative acyl-COA dehydrogenase; ssgcid, structura 100.0
1egd_A396 Medium chain acyl-COA dehydrogenase; flavoprotein, 100.0
1buc_A383 Butyryl-COA dehydrogenase; acyl-COA dehydrogenase 100.0
1ivh_A394 Isovaleryl-COA dehydrogenase; oxidoreductase, acyl 100.0
3r7k_A403 Probable acyl COA dehydrogenase; ssgcid, structura 100.0
3nf4_A387 Acyl-COA dehydrogenase; seattle structural genomic 100.0
3ii9_A396 Glutaryl-COA dehydrogenase; slipchip, microfluidic 100.0
2pg0_A385 Acyl-COA dehydrogenase; GK1316, geobacillus kausto 100.0
2dvl_A372 Acyl-COA dehydrogenase; structural genomics, NPPSF 100.0
1rx0_A393 Acyl-COA dehydrogenase family member 8, mitochondr 100.0
3sf6_A403 Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SB 100.0
4hr3_A415 Putative acyl-COA dehydrogenase; ssgcid, seattle s 100.0
2ix5_A436 Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, 100.0
2eba_A385 Putative glutaryl-COA dehydrogenase; thermus therm 100.0
3swo_A399 Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA d 100.0
2uxw_A607 VERY-long-chain specific acyl-COA dehydrogenase; f 100.0
2wbi_A428 Acyl-COA dehydrogenase family member 11; human, ph 100.0
1siq_A392 GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrog 100.0
3mpi_A397 Glutaryl-COA dehydrogenase; alpha-beta fold, oxido 100.0
3mkh_A438 Nitroalkane oxidase; oxidoreductase flavoenzyme, a 100.0
1r2j_A366 Protein FKBI; polyketide synthase, polyketide, acy 100.0
2c12_A439 Nitroalkane oxidase; oxidoreductase, flavoenzyme, 100.0
3m9v_A439 FAD-dependent oxidoreductase; KIJD3, fatty acyl-CO 100.0
3mxl_A395 Nitrososynthase; flavin monooxygenase, acyl-COA de 100.0
2or0_A414 Hydroxylase; APC7385, rhodococcus SP. RHA1, struct 100.0
2rfq_A394 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1 100.0
2jbr_A422 P-hydroxyphenylacetate hydroxylase C2 oxygenase C; 100.0
3djl_A541 Protein AIDB; alpha helix, beta-barrel, FAD, flavo 100.0
2yyk_A481 4-hydroxyphenylacetate-3-hydroxylase; structurome, 100.0
1u8v_A490 Gamma-aminobutyrate metabolism dehydratase/isomera 100.0
3hwc_A515 Chlorophenol-4-monooxygenase component 2; beta bar 99.96
4g5e_A517 2,4,6-trichlorophenol 4-monooxygenase; oxidoreduct 99.89
3owa_A597 Acyl-COA dehydrogenase; structural genomics, cente 82.1
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-98  Score=862.02  Aligned_cols=607  Identities=30%  Similarity=0.470  Sum_probs=511.9

Q ss_pred             chHhhhhhcCC--CHHHHHH-HHHHHhcCCCCCCC--ccCCHHHHHHHHHHHHHHH---HHHcCCCCccccCCCHHHHHH
Q 048624           41 LCAVIWLYERK--AQGDTRE-SVEYFNSRPDLQTP--VEILKDDHRELCWRQLLGL---VREAGIKPFKYVAEDPAQYFA  112 (673)
Q Consensus        41 ~~~~m~~~l~~--e~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---l~e~Gl~~~~~p~~~~~~~~~  112 (673)
                      ++.+|+..|.+  +...+|+ +++++.++|.|..+  ..+++++.++...+.+.+.   +.+.|..       +..+...
T Consensus        15 ~~~~l~~~l~g~~~~~~~r~~~~~~l~~~p~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~   87 (661)
T 2ddh_A           15 NPELITHILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYEVAVKKSATMVKKMREYGIS-------DPEEIMW   87 (661)
T ss_dssp             CHHHHHHHHHTSHHHHHHHHHHHHHHHTCGGGCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCC-------CHHHHHH
T ss_pred             CHHHHHHHHCCChhHHHHHHHHHHHHhcCcccccCCcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC-------CchHHHH
Confidence            88899988876  3455565 99999999987642  2467777666554443332   2344432       2333323


Q ss_pred             HHHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEEEEcCCCCEEE
Q 048624          113 IAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVATFDPIKDEFI  192 (673)
Q Consensus       113 ~~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA~~d~~~~~~v  192 (673)
                       .+++...  +.+.++.+|.++++.+|..+||++|+++|||++.+|++++|+|+|||+||||+.+++|+|++|+++|+|+
T Consensus        88 -~~~~~~~--~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~v  164 (661)
T 2ddh_A           88 -FKNSVHR--GHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFI  164 (661)
T ss_dssp             -HHHHHHT--TCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEE
T ss_pred             -HHHHhcc--chhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEE
Confidence             5555432  2345567888889999999999999999999999999999999999999999999999999998889999


Q ss_pred             EecCCCCceeeeccC-ccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCCCccCCCCCc
Q 048624          193 INTPNDGAIKWWIGN-AAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDN  271 (673)
Q Consensus       193 LntP~~~G~K~~i~~-~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~  271 (673)
                      ||||+++|+|+|||| +. .|||++|+||+..+++..      |+++|+||++|+++|++.|||+|+++|+++|++++++
T Consensus       165 LntP~~~G~K~wis~~a~-~Ad~~vV~Ar~~~~~~~~------G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~  237 (661)
T 2ddh_A          165 LNSPTVTSIKWWPGGLGK-TSNHAIVLAQLITQGECY------GLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDN  237 (661)
T ss_dssp             EECCSSTTSEECCTTTTT-TCSEEEEEEEEEETTEEE------EEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCC
T ss_pred             EcCCCCCeEEEecCCCcc-cCCEEEEEEEEccCCCCC------ceEEEEEecccccCCCCCCCeEEecCcccccCCCCcc
Confidence            999999999999999 66 999999999997654443      8999999999889999999999999999999999999


Q ss_pred             eeEEecceecCcccccccCCcccCCCccccCCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 048624          272 GALRFCSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGLAYSSVGVLKIAATIAIRYSLLRQQFGP  351 (673)
Q Consensus       272 ~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~~~~~~~g~~~~~~~l~~~rl~~aa~~~G~a~~al~~a~~ya~~R~qfg~  351 (673)
                      +.|.||||+||++++||++++|.++|.|.+++   .  +...+..|..+|+.+++.++|++++|++++++|++.|+|||+
T Consensus       238 ~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~---~--~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~  312 (661)
T 2ddh_A          238 GYLKMDNYRIPRENMLMKYAQVKPDGTYVKPL---S--NKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEI  312 (661)
T ss_dssp             EEEEESSEEEEGGGBCCSSCEECTTCCEECCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCS
T ss_pred             eEEEeccEEECHHHhcCcccccCCCCceeccc---h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC
Confidence            99999999999999999988888889888764   1  346677889999999999999999999999999999999997


Q ss_pred             -CCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCcchhhhHHHHHHhHHHHHHHHHHHHHHHH
Q 048624          352 -PRKPEVSILDYQSQQHKLMPMLASTYAFHFATANLVEKYSEM---KKTHDEQLVGDVHALSAGLKSYVTSYTAKSLSVC  427 (673)
Q Consensus       352 -~~~~e~~i~~~q~vq~~La~~~a~~~a~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~K~~at~~a~~~~~~~  427 (673)
                       ++++|.||++||.+|++|+++.+.+++++++...+...+...   .+.++.....+.+..++++|+++++.+.++++.|
T Consensus       313 ~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a  392 (661)
T 2ddh_A          313 KQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEEC  392 (661)
T ss_dssp             STTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             467788999999999999999999999887776665554321   1223221223578899999999999999999999


Q ss_pred             HHHhCccCccCccchhccccccccccccCccHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHhhhhhhcCCCCCccc
Q 048624          428 REACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVLLQQVAGDLLKQYKEKFQGGPLTVTWNYLRESMNAYLSQPNPVTAR  507 (673)
Q Consensus       428 ~q~~Gg~Gy~~~~~l~r~~rd~~~~~~~eG~~~vl~~~ia~~ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  507 (673)
                      +|+|||+||+.+++++++|||+++.++++|+|+++++++|+.+|+.|++.+++.++.+++.||.+... .+..+++.. .
T Consensus       393 ~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~-~  470 (661)
T 2ddh_A          393 RMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLNDLPS-QRIQPQQVA-V  470 (661)
T ss_dssp             HHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHHHHHHTCCCCGGGGGGGGCCC------------
T ss_pred             HHHhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHhhhh-hhccccccc-c
Confidence            99999999999999999999999999999999999999999999999998888888899999976321 111111111 1


Q ss_pred             ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 048624          508 WEGEEHLRDPKFQLDAFRYRTSRLLQSVAVRLRK-HSKTLGSFGAWNRCLNHLLTLAESHIESVILAKFIEAVQNCPDPS  586 (673)
Q Consensus       508 ~~~~~~l~~~~~~~~~~~~r~~~l~~~~~~~l~~-~~~~~~~~~a~n~~~~~~~~~a~A~~e~~~l~~f~~~i~~~~~~~  586 (673)
                      ..+..++.|+++++++|++|+++++..+++++++ .++|.+.+++||.|+++++++|+||+++++++.|+++|+++++++
T Consensus       471 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~g~~~~~a~n~~~~~~~~~a~a~~~~~~~~~f~~~~~~~~~~~  550 (661)
T 2ddh_A          471 WPTMVDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSDKLPKIQDKA  550 (661)
T ss_dssp             ----CCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHGGGCSSHH
T ss_pred             ccchhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence            2346789999999999999999999999999987 556778999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhHhhhhccccccccCcCChhhHHHHHHHHHHHHHHhhhhHHHhhhcCCCCcccccCcccc-CchHHH
Q 048624          587 SRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIAR-QSDAYA  665 (673)
Q Consensus       587 ~~~vL~~L~~Lyal~~i~~~~~~~~~~~~ls~~~~~~l~~~~~~l~~~lrp~a~~Lvdaf~~pd~~l~s~i~~-dg~~Ye  665 (673)
                      ++.+|.+||.||+|+.|++|+|||+++|+||+++++.|++.+.+||.+|||||+.|||+|+|||++|+||||+ ||++||
T Consensus       551 ~~~~L~~l~~L~~l~~i~~~~~~~l~~~~~s~~~~~~~~~~~~~l~~~lrp~av~Lvdaf~~~d~~l~s~lg~~dg~vY~  630 (661)
T 2ddh_A          551 VQAVLRNLCLLYSLYGISQKGGDFLEGSIITGAQLSQVNARILELLTLIRPNAVALVDAFDFKDMTLGSVLGRYDGNVYE  630 (661)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHTTSSCHHHHHHHHHHHHHHHHHHGGGHHHHHHTTCCCHHHHTCSTTCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHHhCchhhccCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999 999999


Q ss_pred             HHHHhh
Q 048624          666 YYTQIV  671 (673)
Q Consensus       666 ~~~~~~  671 (673)
                      +||+++
T Consensus       631 ~l~~~~  636 (661)
T 2ddh_A          631 NLFEWA  636 (661)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999985
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A* Back     alignment and structure
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus} Back     alignment and structure
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis} Back     alignment and structure
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 Back     alignment and structure
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A* Back     alignment and structure
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens} Back     alignment and structure
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A* Back     alignment and structure
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile} Back     alignment and structure
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A* Back     alignment and structure
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A* Back     alignment and structure
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1 Back     alignment and structure
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 Back     alignment and structure
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus} Back     alignment and structure
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile} Back     alignment and structure
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A Back     alignment and structure
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus} Back     alignment and structure
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus} Back     alignment and structure
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 Back     alignment and structure
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis} Back     alignment and structure
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus} Back     alignment and structure
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A* Back     alignment and structure
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus} Back     alignment and structure
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis} Back     alignment and structure
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A* Back     alignment and structure
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens} Back     alignment and structure
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A* Back     alignment and structure
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A* Back     alignment and structure
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina} Back     alignment and structure
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1 Back     alignment and structure
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A* Back     alignment and structure
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata} Back     alignment and structure
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea} Back     alignment and structure
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP} Back     alignment and structure
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A Back     alignment and structure
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A* Back     alignment and structure
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A* Back     alignment and structure
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A* Back     alignment and structure
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1 Back     alignment and structure
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia} Back     alignment and structure
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134} Back     alignment and structure
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 673
d2ddha3267 e.6.1.2 (A:1-267) Peroxisomal acyl-CoA oxidase-II, 3e-43
d1w07a3271 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domai 4e-40
d2ddha2181 a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase- 1e-39
d1w07a2198 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, do 2e-38
d2ddha1183 a.29.3.2 (A:278-460) Peroxisomal acyl-CoA oxidase- 5e-36
d1w07a1189 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, do 1e-32
d1ivha2236 e.6.1.1 (A:6-241) Isovaleryl-coa dehydrogenase, NM 2e-21
d3mdea2231 e.6.1.1 (A:11-241) Medium chain acyl-CoA dehydroge 4e-16
d1rx0a2231 e.6.1.1 (A:10-240) Isobutyryl-CoA dehydrogenase {H 5e-14
d1jqia2231 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM do 4e-13
d1ukwa2227 e.6.1.1 (A:32-258) Medium chain acyl-CoA dehydroge 1e-12
d2d29a2233 e.6.1.1 (A:2-234) Acyl-CoA dehydrogenase {Thermus 4e-12
d1buca2232 e.6.1.1 (A:1-232) Butyryl-CoA dehydrogenase, NM do 1e-11
d2c12a2259 e.6.1.1 (A:2-260) Nitroalkane oxidase {Fusarium ox 2e-11
d1siqa2236 e.6.1.1 (A:3-238) Glutaryl-CoA dehydrogenase GCDH 6e-10
d1rx0a1153 a.29.3.1 (A:241-393) Isobutyryl-CoA dehydrogenase 1e-07
d1r2ja1153 a.29.3.1 (A:213-365) Protein FkbI {Streptomyces hy 1e-07
d1jqia1153 a.29.3.1 (A:235-387) Butyryl-CoA dehydrogenase, C- 3e-07
d1buca1151 a.29.3.1 (A:233-383) Butyryl-CoA dehydrogenase, C- 9e-07
d2d29a1153 a.29.3.1 (A:235-387) Acyl-CoA dehydrogenase {Therm 1e-06
d1u8va2275 e.6.1.1 (A:1-275) 4-hydroxybutyryl-CoA dehydratase 9e-06
d1siqa1154 a.29.3.1 (A:239-392) Glutaryl-CoA dehydrogenase GC 3e-05
d3mdea1154 a.29.3.1 (A:242-395) Medium chain acyl-CoA dehydro 3e-05
d1ukwa1152 a.29.3.1 (A:259-410) Medium chain acyl-CoA dehydro 6e-05
d1r2ja2210 e.6.1.1 (A:3-212) Protein FkbI {Streptomyces hygro 1e-04
d1ivha1151 a.29.3.1 (A:242-392) Isovaleryl-CoA dehydrogenase, 3e-04
>d2ddha3 e.6.1.2 (A:1-267) Peroxisomal acyl-CoA oxidase-II, domains 1 and 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 267 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acyl-CoA dehydrogenase NM domain-like
superfamily: Acyl-CoA dehydrogenase NM domain-like
family: acyl-CoA oxidase N-terminal domains
domain: Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  154 bits (390), Expect = 3e-43
 Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 16/257 (6%)

Query: 46  WLYERKAQGDTRESV-EYFNSRPDLQT-PVEIL-KDDHRELCWRQLLGLVREAGIKPFKY 102
            L         R  +     + PD Q      L +    E+  ++   +V+    K  +Y
Sbjct: 22  ILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYEVAVKKSATMVK----KMREY 77

Query: 103 VAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPG 162
              DP +      +V          + +   ++  ++++  T + +++++    NL+  G
Sbjct: 78  GISDPEEIMWFKNSV---HRGHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITG 134

Query: 163 CFAMTELHHGSNVQGLQTVATFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLM 222
            +A TE+ HG++++GL+T AT+DP   EFI+N+P   +IKWW G        A V A+L 
Sbjct: 135 TYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQL- 193

Query: 223 LPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGHKVGLNGVDNGALRFCSVRIP 282
                       G+HAF+VPIR++ TH+ LPGI + D G K G   +DNG L+  + RIP
Sbjct: 194 -----ITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIP 248

Query: 283 RDNLLNRFGDVSRDGKY 299
           R+N+L ++  V  DG Y
Sbjct: 249 RENMLMKYAQVKPDGTY 265
>d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 271 Back     information, alignment and structure
>d2ddha2 a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 181 Back     information, alignment and structure
>d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 198 Back     information, alignment and structure
>d2ddha1 a.29.3.2 (A:278-460) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 183 Back     information, alignment and structure
>d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 189 Back     information, alignment and structure
>d1ivha2 e.6.1.1 (A:6-241) Isovaleryl-coa dehydrogenase, NM domains {Human (Homo sapiens) [TaxId: 9606]} Length = 236 Back     information, alignment and structure
>d3mdea2 e.6.1.1 (A:11-241) Medium chain acyl-CoA dehydrogenase, NM domains {Pig (Sus scrofa) [TaxId: 9823]} Length = 231 Back     information, alignment and structure
>d1rx0a2 e.6.1.1 (A:10-240) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 231 Back     information, alignment and structure
>d1jqia2 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM domains {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 231 Back     information, alignment and structure
>d1ukwa2 e.6.1.1 (A:32-258) Medium chain acyl-CoA dehydrogenase, NM domains {Thermus thermophilus [TaxId: 274]} Length = 227 Back     information, alignment and structure
>d2d29a2 e.6.1.1 (A:2-234) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 233 Back     information, alignment and structure
>d1buca2 e.6.1.1 (A:1-232) Butyryl-CoA dehydrogenase, NM domains {Megasphaera elsdenii [TaxId: 907]} Length = 232 Back     information, alignment and structure
>d2c12a2 e.6.1.1 (A:2-260) Nitroalkane oxidase {Fusarium oxysporum [TaxId: 5507]} Length = 259 Back     information, alignment and structure
>d1siqa2 e.6.1.1 (A:3-238) Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapiens) [TaxId: 9606]} Length = 236 Back     information, alignment and structure
>d1rx0a1 a.29.3.1 (A:241-393) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 153 Back     information, alignment and structure
>d1r2ja1 a.29.3.1 (A:213-365) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]} Length = 153 Back     information, alignment and structure
>d1jqia1 a.29.3.1 (A:235-387) Butyryl-CoA dehydrogenase, C-domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 153 Back     information, alignment and structure
>d1buca1 a.29.3.1 (A:233-383) Butyryl-CoA dehydrogenase, C-domain {Megasphaera elsdenii [TaxId: 907]} Length = 151 Back     information, alignment and structure
>d2d29a1 a.29.3.1 (A:235-387) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 153 Back     information, alignment and structure
>d1u8va2 e.6.1.1 (A:1-275) 4-hydroxybutyryl-CoA dehydratase AbfD, NM domains {Clostridium aminobutyricum [TaxId: 33953]} Length = 275 Back     information, alignment and structure
>d1siqa1 a.29.3.1 (A:239-392) Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapiens) [TaxId: 9606]} Length = 154 Back     information, alignment and structure
>d3mdea1 a.29.3.1 (A:242-395) Medium chain acyl-CoA dehydrogenase, C-domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 154 Back     information, alignment and structure
>d1ukwa1 a.29.3.1 (A:259-410) Medium chain acyl-CoA dehydrogenase, C-domain {Thermus thermophilus [TaxId: 274]} Length = 152 Back     information, alignment and structure
>d1r2ja2 e.6.1.1 (A:3-212) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]} Length = 210 Back     information, alignment and structure
>d1ivha1 a.29.3.1 (A:242-392) Isovaleryl-CoA dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 151 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query673
d1w07a3271 Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale 100.0
d2ddha3267 Peroxisomal acyl-CoA oxidase-II, domains 1 and 2 { 100.0
d2ddha2181 Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 { 100.0
d1ukwa2227 Medium chain acyl-CoA dehydrogenase, NM domains {T 100.0
d1w07a2198 Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale 100.0
d3mdea2231 Medium chain acyl-CoA dehydrogenase, NM domains {P 100.0
d1jqia2231 Butyryl-CoA dehydrogenase, NM domains {Rat (Rattus 100.0
d2d29a2233 Acyl-CoA dehydrogenase {Thermus thermophilus [TaxI 100.0
d1ivha2236 Isovaleryl-coa dehydrogenase, NM domains {Human (H 100.0
d1siqa2236 Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapie 100.0
d2c12a2259 Nitroalkane oxidase {Fusarium oxysporum [TaxId: 55 100.0
d1buca2232 Butyryl-CoA dehydrogenase, NM domains {Megasphaera 100.0
d1rx0a2231 Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) 100.0
d1r2ja2210 Protein FkbI {Streptomyces hygroscopicus [TaxId: 1 99.97
d1w07a1189 Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale 99.97
d2ddha1183 Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 { 99.97
d1jqia1153 Butyryl-CoA dehydrogenase, C-domain {Rat (Rattus n 99.93
d1siqa1154 Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapie 99.93
d3mdea1154 Medium chain acyl-CoA dehydrogenase, C-domain {Pig 99.92
d1ivha1151 Isovaleryl-CoA dehydrogenase, C-domain {Human (Hom 99.92
d1rx0a1153 Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) 99.92
d2d29a1153 Acyl-CoA dehydrogenase {Thermus thermophilus [TaxI 99.92
d1r2ja1153 Protein FkbI {Streptomyces hygroscopicus [TaxId: 1 99.91
d2c12a1170 Nitroalkane oxidase {Fusarium oxysporum [TaxId: 55 99.91
d1buca1151 Butyryl-CoA dehydrogenase, C-domain {Megasphaera e 99.91
d1ukwa1152 Medium chain acyl-CoA dehydrogenase, C-domain {The 99.9
d1u8va2275 4-hydroxybutyryl-CoA dehydratase AbfD, NM domains 99.75
d1u8va1215 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal 83.29
>d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acyl-CoA dehydrogenase NM domain-like
superfamily: Acyl-CoA dehydrogenase NM domain-like
family: acyl-CoA oxidase N-terminal domains
domain: Acyl-coenzyme A oxidase 1, domains 1 and 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.9e-42  Score=349.37  Aligned_cols=252  Identities=30%  Similarity=0.529  Sum_probs=208.3

Q ss_pred             CCCCccCcC-chHhhhhhcCC--CHHHHHH-HHHHHhcCCCCCCC--ccCCHHHHHHHHHHHH---HHHHHHcCCCCccc
Q 048624           32 MAPSAQNYD-LCAVIWLYERK--AQGDTRE-SVEYFNSRPDLQTP--VEILKDDHRELCWRQL---LGLVREAGIKPFKY  102 (673)
Q Consensus        32 ~~~~~~~~~-~~~~m~~~l~~--e~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~l~e~Gl~~~~~  102 (673)
                      +..+|...+ ++++|+.++..  |+..+++ +.+++.++|+|.+.  ..+++++......++.   ++.+.+.|+.    
T Consensus         6 L~~eR~~a~Fd~~el~~~l~g~ee~~~~r~~v~~~~~~dp~f~~~~~~~~sr~e~~~~~~~~~~~~~~~~~~~g~~----   81 (271)
T d1w07a3           6 LADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKELFKSTLRKCAHAFKRIIELRLN----   81 (271)
T ss_dssp             THHHHTTCSSCHHHHHHHHHSSHHHHHHHHHHHHHHHTCGGGCCTTTTSSCHHHHHHHHHHHHHHHHHHHHHTTCC----
T ss_pred             HHHHhccCCCCHHHHHHHHcCCHHHHHHHHHHHHHHhcCcccCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC----
Confidence            444565544 88999988864  4445555 99999999988652  3466666665554443   3444455543    


Q ss_pred             cCCCHHHHHHHHHHHhccchhhHHHHHHhHhhHHHHHhccCChhhHHhHHhhhhcCCcceeeeccCCCCCCCcCCceeEE
Q 048624          103 VAEDPAQYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTVA  182 (673)
Q Consensus       103 p~~~~~~~~~~~e~la~~~~s~~~~~~~h~~l~~~~i~~~gt~eq~~~~l~~i~~g~~~g~~a~TE~~~Gsd~~~~~TtA  182 (673)
                          ......+...+..     +..+++|++||+++|..+||++||++|||++.+|++++|||+|||+||||+.+++|+|
T Consensus        82 ----~~~~~~~~~~~~~-----~~~~~vh~~~~~~~i~~~Gt~eQk~~~Lp~l~~G~~~~~~a~TEp~~GSd~~~l~T~A  152 (271)
T d1w07a3          82 ----EEEAGRLRHFIDQ-----PAYVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTA  152 (271)
T ss_dssp             ----HHHHHHHHHHHCC-----CCHHHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEE
T ss_pred             ----hhhhHHHHHHhcc-----chHHHHHHHhhHHHHHhhCCHHHHHHhhHHHhCCCeEEEecccCCccccCccccccee
Confidence                2233333333322     2346789999999999999999999999999999999999999999999999999999


Q ss_pred             EEcCCCCEEEEecCCCCceeeeccCccccCcEEEEEEEEecCCCCCCCCCCCceEEEEEeecCCCCCCCCCCeEEecCCC
Q 048624          183 TFDPIKDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLMLPTHDSKGYSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGH  262 (673)
Q Consensus       183 ~~d~~~~~~vLntP~~~G~K~~i~~~~~~A~~~vV~Ar~~~~g~~~~~~~~~g~~~FlV~~rd~~~~~~~pGv~v~~~~~  262 (673)
                      ++|+++++||||+|+..|+|+||+|++..|++++|+||+..+++++      |+++|+||+++.+++.++|||+|+++++
T Consensus       153 ~~d~~gd~~vlng~k~~~~K~wi~~~g~~a~~~vv~a~~~~~~~~~------g~~~flV~~~~~~~~~~~pGv~v~~~~~  226 (271)
T d1w07a3         153 TLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDY------GIHGFIVQLRSLEDHSPLPNITVGDIGT  226 (271)
T ss_dssp             EEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEETTEEE------EEEEEEEECBCTTTCCBCTTEEEEECCC
T ss_pred             eecCCCceeeecccccceeeeccCCchhhhhhhheeeeecCCCCCC------CEEEEEEeccccCCCCCCCceEEccccc
Confidence            9999899999999999999999999765899999999999877665      9999999999999999999999999999


Q ss_pred             Ccc---CCCCCceeEEecceecCcccccccCCcccCCCccccC
Q 048624          263 KVG---LNGVDNGALRFCSVRIPRDNLLNRFGDVSRDGKYTSS  302 (673)
Q Consensus       263 ~~G---~~~~~~~~l~fd~v~VP~~~lL~~~~~v~~~G~~~~~  302 (673)
                      |+|   +++.+++.|.|||||||++||||++++|.++|.|+++
T Consensus       227 k~G~~~~~~~~~~~i~Fd~VrVP~~~lLg~~g~v~~~G~~~~s  269 (271)
T d1w07a3         227 KMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPS  269 (271)
T ss_dssp             BSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEEC
T ss_pred             ccCccccCCCceEEEEEeeEEECHHHcCCCCCcCCCCceEecC
Confidence            998   6899999999999999999999999999999999765
>d2ddha3 e.6.1.2 (A:1-267) Peroxisomal acyl-CoA oxidase-II, domains 1 and 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2ddha2 a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ukwa2 e.6.1.1 (A:32-258) Medium chain acyl-CoA dehydrogenase, NM domains {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3mdea2 e.6.1.1 (A:11-241) Medium chain acyl-CoA dehydrogenase, NM domains {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1jqia2 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM domains {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2d29a2 e.6.1.1 (A:2-234) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivha2 e.6.1.1 (A:6-241) Isovaleryl-coa dehydrogenase, NM domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1siqa2 e.6.1.1 (A:3-238) Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c12a2 e.6.1.1 (A:2-260) Nitroalkane oxidase {Fusarium oxysporum [TaxId: 5507]} Back     information, alignment and structure
>d1buca2 e.6.1.1 (A:1-232) Butyryl-CoA dehydrogenase, NM domains {Megasphaera elsdenii [TaxId: 907]} Back     information, alignment and structure
>d1rx0a2 e.6.1.1 (A:10-240) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r2ja2 e.6.1.1 (A:3-212) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]} Back     information, alignment and structure
>d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2ddha1 a.29.3.2 (A:278-460) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jqia1 a.29.3.1 (A:235-387) Butyryl-CoA dehydrogenase, C-domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1siqa1 a.29.3.1 (A:239-392) Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3mdea1 a.29.3.1 (A:242-395) Medium chain acyl-CoA dehydrogenase, C-domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1ivha1 a.29.3.1 (A:242-392) Isovaleryl-CoA dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rx0a1 a.29.3.1 (A:241-393) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2d29a1 a.29.3.1 (A:235-387) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1r2ja1 a.29.3.1 (A:213-365) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]} Back     information, alignment and structure
>d2c12a1 a.29.3.1 (A:261-430) Nitroalkane oxidase {Fusarium oxysporum [TaxId: 5507]} Back     information, alignment and structure
>d1buca1 a.29.3.1 (A:233-383) Butyryl-CoA dehydrogenase, C-domain {Megasphaera elsdenii [TaxId: 907]} Back     information, alignment and structure
>d1ukwa1 a.29.3.1 (A:259-410) Medium chain acyl-CoA dehydrogenase, C-domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1u8va2 e.6.1.1 (A:1-275) 4-hydroxybutyryl-CoA dehydratase AbfD, NM domains {Clostridium aminobutyricum [TaxId: 33953]} Back     information, alignment and structure
>d1u8va1 a.29.3.1 (A:276-490) 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain {Clostridium aminobutyricum [TaxId: 33953]} Back     information, alignment and structure