Citrus Sinensis ID: 048662

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLKGLDIDSILQSYSV
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccccHHHHHHHHHHHHHHHHHHEEHEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccEEccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHEEEccccHHHHcccccc
Coil and Loop (DISEMBL)
rtfgisslnkknvddGRKLASAVYLQVSSISQAHLFVTHArswsyvkcpVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAfttkrdfgkeeHERRWAQEQRtlhglhprdtsmfsvESSYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLkgldidsilqsysv
Flexible Loop (DISEMBL)
rtfgisslnkknvddgRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTafttkrdfgkeehERRWAQeqrtlhglhprdtsmFSVESSYGELSRMAEEAIRRAEIARLRELHTLKGQVeslirlkgldidsilqsysv
Low Complexity Region (SEG)
RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMaeeairraeiarlrelHTLKGQVESLIRLKGLDIDSILQSYSV
Disordered region (IsUnstruct)
******************LASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKR*********************************************IRRAEIARLRELHTLKGQVESLIRLKGLDIDSIL*****
Disordered Region (DISOPRED)
RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNF*****************************************************************IARLRELHTLKGQVESLIRLKGLDIDS*******
Disordered Region (DISEMBL)
RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRD***********QEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLKGLDIDSILQSYSV
Disordered Region (DISPRO)
*TFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLKGLDIDSILQSYS*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLKGLDIDSILQSYSV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
Q9SU58	960	ATPase 4, plasma membrane	yes	no	1.0	0.222	0.705	2e-84
Q9LV11	956	ATPase 11, plasma membran	no	no	1.0	0.223	0.696	2e-83
Q08436	956	Plasma membrane ATPase 3	N/A	no	1.0	0.223	0.668	4e-81
P22180	956	Plasma membrane ATPase 1	N/A	no	1.0	0.223	0.682	4e-81
Q08435	957	Plasma membrane ATPase 1	N/A	no	0.990	0.221	0.669	1e-80
P23980	704	Plasma membrane ATPase 2	N/A	no	1.0	0.303	0.663	2e-80
Q03194	952	Plasma membrane ATPase 4	N/A	no	0.971	0.218	0.600	1e-70
Q42556	954	ATPase 9, plasma membrane	no	no	0.971	0.218	0.610	5e-69
Q7XPY2	951	Plasma membrane ATPase OS	no	no	0.971	0.218	0.586	5e-69
Q9SJB3	949	ATPase 5, plasma membrane	no	no	0.971	0.219	0.591	6e-69

>sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2

 Score =  311 bits (797), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 151/214 (70%), Positives = 176/214 (82%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           RTFG+++L K   DD RKLASA+YLQVS ISQA +FVT +RSWS+V+ P +FL +AF +A
Sbjct: 747 RTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGIFLMIAFILA 806

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGVIWLYNIIFYI LDFIKFFIRY LS   WDLVI
Sbjct: 807 QLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVI 866

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT ++DFGKE+ E +WA  QRTLHGL   DT MF+  +   EL++MAEEA RRAE
Sbjct: 867 EQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAE 926

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDI++I Q+Y+V
Sbjct: 927 IARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960

The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6

>sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1

 Score =  308 bits (788), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 149/214 (69%), Positives = 172/214 (80%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           RTFG+S+L K   DD RKLASA+YLQVS ISQA +FVT +RSWSYV+ P + L +AF +A
Sbjct: 743 RTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERPGMLLVVAFILA 802

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGVIWLYNI+FYI LD IKF IRY LS   WDLVI
Sbjct: 803 QLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVI 862

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT ++DFGKE+ E +WA  QRTLHGL   D  MF   + + ELS+MAEEA RRAE
Sbjct: 863 EQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFPERTHFNELSQMAEEAKRRAE 922

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDI++I Q+Y+V
Sbjct: 923 IARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956

The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

>sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1

 Score =  300 bits (769), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 143/214 (66%), Positives = 172/214 (80%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           R FG+S+L K   DD RKLASA+YLQVS+ISQA +FVT +RSWS+++ P L L +AF +A
Sbjct: 743 RVFGVSTLEKTATDDFRKLASAIYLQVSTISQALIFVTRSRSWSFMERPGLLLVVAFFIA 802

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGVIWLYNI+FYI LD   F IRY LS   WDLVI
Sbjct: 803 QLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDLXXFLIRYALSGKAWDLVI 862

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT K+DFGKE+ E +WA  QRTLHGL   D  +FS  +++ EL+++AEEA RRAE
Sbjct: 863 EQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPKIFSETTNFNELNQLAEEAKRRAE 922

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES+++LKGLDI++I Q+Y+V
Sbjct: 923 IARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956

The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Nicotiana plumbaginifolia (taxid: 4092)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

>sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1

 Score =  300 bits (769), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 146/214 (68%), Positives = 171/214 (79%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           R FG+S+L K   DD RKLASA+YLQVS+ISQA +FVT +RSWS+V+ P L L  AF VA
Sbjct: 743 RIFGVSTLEKTATDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVFAFFVA 802

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGVIWLYNI+ YI LD IKF IRY LS   WDLV+
Sbjct: 803 QLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVTYIPLDLIKFLIRYALSGKAWDLVL 862

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT K+DFGKE  E +WA  QRTLHGL   D  +FS  +++ EL+++AEEA RRAE
Sbjct: 863 EQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPKIFSETTNFNELNQLAEEAKRRAE 922

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES+++LKGLDI++I QSY+V
Sbjct: 923 IARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956

The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

>sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1

 Score =  299 bits (765), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 142/212 (66%), Positives = 172/212 (81%)

Query: 3   FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
           FG+S+L K   DD RKLASA+YLQVS ISQA +FVT +RSWS+V+ P   L +AF +AQL
Sbjct: 746 FGVSTLEKTATDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGFLLVIAFVIAQL 805

Query: 63  TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
            ATLIAVYA WSFA IEGIGWGWAGVIW+YN++FYI LD IKFFIRY LS   WDLV E+
Sbjct: 806 VATLIAVYANWSFAAIEGIGWGWAGVIWIYNLVFYIPLDIIKFFIRYALSGRAWDLVFER 865

Query: 123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAEIA 182
           R AFT K+DFGKE+ E +WA  QRTLHGL   DT +FS  +++ EL+++AEEA RRAEIA
Sbjct: 866 RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKLFSEATNFNELNQLAEEAKRRAEIA 925

Query: 183 RLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           RLRELHTLKG VES+++LKGLDI++I Q+Y+V
Sbjct: 926 RLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957

The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Nicotiana plumbaginifolia (taxid: 4092)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

>sp|P23980|PMA2_SOLLC Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1

 Score =  298 bits (762), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 142/214 (66%), Positives = 172/214 (80%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           R FG+S+L +   DD RKLASA+YLQVS+ISQA +FVT +RSWS+V+ P L L +A  VA
Sbjct: 491 RVFGVSTLQRTATDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVVALIVA 550

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA+WSFA IEGIGWGWAGVIWLYN++FY  LD IKF IRY LS   WDLV+
Sbjct: 551 QLVATLIAVYASWSFAAIEGIGWGWAGVIWLYNLVFYFPLDIIKFLIRYALSGRAWDLVL 610

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT K+DFGKE+ E +WA  QRTLHGL   D  +FS  +++ EL+++AEEA RRAE
Sbjct: 611 EQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIKLFSEATNFNELNQLAEEAKRRAE 670

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IAR RELHTLKG VES+++LKGLDI++I QSY+V
Sbjct: 671 IARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704

The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

>sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1

 Score =  266 bits (679), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/213 (60%), Positives = 172/213 (80%), Gaps = 5/213 (2%)

Query: 3   FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
           FG+ SL  +N D+  ++ SA+YLQVS ISQA +FVT +RSWS+++ P + L +AF +AQL
Sbjct: 744 FGVKSL--RNSDE--EMMSALYLQVSIISQALIFVTRSRSWSFLERPGMLLVIAFMIAQL 799

Query: 63  TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
            ATLIAVYA W+FA ++G GWGWAGVIWLY+IIFY+ LD +KF IRY+LS   W+ +++ 
Sbjct: 800 VATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKFAIRYILSGKAWNNLLDN 859

Query: 123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRD-TSMFSVESSYGELSRMAEEAIRRAEI 181
           +TAFTTK+D+GKEE E +WA  QRTLHGL P + T++F+ ++SY ELS +AE+A RRAE+
Sbjct: 860 KTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNSYRELSEIAEQAKRRAEM 919

Query: 182 ARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           ARLRELHTLKG VES+++LKGLDI++I Q Y+V
Sbjct: 920 ARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952

The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Nicotiana plumbaginifolia (taxid: 4092)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

>sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2

 Score =  260 bits (665), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 130/213 (61%), Positives = 165/213 (77%), Gaps = 5/213 (2%)

Query: 3   FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
           FG+ S++     +  +L +AVYLQVS +SQA +FVT +RSWSYV+ P  +L  AF +AQL
Sbjct: 746 FGVRSISG----NPHELTAAVYLQVSIVSQALIFVTRSRSWSYVERPGFWLISAFFMAQL 801

Query: 63  TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
            ATLIAVYA W+FA I GIGWGWAGVIWLY+I+FYI LD +KF IRY LS   WD VIE 
Sbjct: 802 IATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILKFIIRYSLSGRAWDNVIEN 861

Query: 123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTS-MFSVESSYGELSRMAEEAIRRAEI 181
           +TAFT+K+D+GK E E +WAQ QRTLHGL P  TS MF+ +S+Y ELS +A++A RRAE+
Sbjct: 862 KTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTYRELSEIADQAKRRAEV 921

Query: 182 ARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           ARLRE HTLKG VES+++ KGLDI++I Q Y++
Sbjct: 922 ARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954

The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

>sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1

 Score =  260 bits (664), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 126/215 (58%), Positives = 164/215 (76%), Gaps = 7/215 (3%)

Query: 3   FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
           FG+ S+         ++ SA+YLQVS +SQA +FVT +RSWS+++ P L L  AF +AQL
Sbjct: 741 FGVRSIRNSE----HEMMSALYLQVSIVSQALIFVTRSRSWSFIERPGLLLVTAFMLAQL 796

Query: 63  TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
            AT +AVYA W FA I+GIGWGWAGVIWLY+I+FY  LD  KFFIR+VLS   WD ++E 
Sbjct: 797 VATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRFVLSGRAWDNLLEN 856

Query: 123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRD---TSMFSVESSYGELSRMAEEAIRRA 179
           + AFTTK+D+G+EE E +WA  QRTLHGL P +    ++F+ +SSY ELS +AE+A RRA
Sbjct: 857 KIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYRELSEIAEQAKRRA 916

Query: 180 EIARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           EIARLREL+TLKG VES+++LKGLDID+I Q+Y+V
Sbjct: 917 EIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951

The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

>sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3

 Score =  260 bits (664), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 126/213 (59%), Positives = 164/213 (76%), Gaps = 5/213 (2%)

Query: 3   FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
           FG+  L+++      ++ +A+YLQVS ISQA +FVT +RSWSY +CP L L  AF +AQL
Sbjct: 741 FGVRPLSQRP----EQMMAALYLQVSIISQALIFVTRSRSWSYAECPGLLLLGAFVIAQL 796

Query: 63  TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
            AT IAVYA WSFA IEG GWGWAGVIWLY+ + YI LD +KF IRYVLS   W  ++E 
Sbjct: 797 VATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYVLSGKAWLNLLEN 856

Query: 123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRD-TSMFSVESSYGELSRMAEEAIRRAEI 181
           +TAFTTK+D+GKEE E +WA  QRTLHGL P +  ++F+ ++SY ELS++AE+A RRAE+
Sbjct: 857 KTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSELSQIAEQAKRRAEV 916

Query: 182 ARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
            RLRE++TLKG VES+++LKGLDID+I Q Y+V
Sbjct: 917 VRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949

The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
255552828	762	H(\+)-transporting atpase plant/fungi pl	1.0	0.280	0.738	2e-87
356550952	916	PREDICTED: plasma membrane ATPase 1-like	1.0	0.233	0.728	3e-87
31580857	386	plasma membrane H+-ATPase [Sesbania rost	0.995	0.551	0.737	1e-86
356572262	956	PREDICTED: ATPase 11, plasma membrane-ty	1.0	0.223	0.705	2e-84
449461911	956	PREDICTED: ATPase 11, plasma membrane-ty	1.0	0.223	0.710	3e-84
31580855	956	plasma membrane H+-ATPase [Sesbania rost	1.0	0.223	0.705	2e-83
255540887	801	H(\+)-transporting atpase plant/fungi pl	1.0	0.267	0.700	2e-83
13016806	958	P-type H+-ATPase [Vicia faba]	1.0	0.223	0.705	7e-83
224135653	967	autoinhibited H+ ATPase [Populus trichoc	1.0	0.221	0.700	9e-83
30692952	960	H(+)-ATPase 4 [Arabidopsis thaliana] gi|	1.0	0.222	0.705	1e-82

>gi|255552828|ref|XP_002517457.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis] gi|223543468|gb|EEF44999.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 158/214 (73%), Positives = 178/214 (83%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           RTFG+SSL KK+ DD RKLASA+YLQVS+ISQA +FVT ARSWS+V+ P L L  AF +A
Sbjct: 549 RTFGVSSLQKKDDDDFRKLASAIYLQVSTISQALIFVTRARSWSFVERPGLLLVAAFVIA 608

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGV+WLYN+IFY  LDFIKF IRY LS   WDLVI
Sbjct: 609 QLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYFPLDFIKFIIRYALSGKAWDLVI 668

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT K+DFGKEE E +WA  QRTLHGLHP D  MF+  SSY EL++MAEEA RRAE
Sbjct: 669 EQRIAFTRKKDFGKEERELKWAHAQRTLHGLHPPDIKMFNDRSSYTELNQMAEEAKRRAE 728

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDID+I Q+Y+V
Sbjct: 729 IARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 762

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550952|ref|XP_003543845.1| PREDICTED: plasma membrane ATPase 1-like [Glycine max]

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 156/214 (72%), Positives = 181/214 (84%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           +TFG+SSL KK+ DD RKLASA+YLQVS+ISQA +F+T ARSWSYV+ P L L  AF +A
Sbjct: 703 QTFGVSSLQKKDRDDFRKLASAIYLQVSTISQALIFITRARSWSYVERPGLLLVAAFVIA 762

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGV+WLYN+IFYI LDFIKF IRY LS   WDLVI
Sbjct: 763 QLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYIPLDFIKFIIRYALSGRAWDLVI 822

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT K+DFGKEE E +WA  QRTLHGLHP +T MF+  +SY EL++MAEEA RRAE
Sbjct: 823 EQRIAFTRKKDFGKEERELKWAHAQRTLHGLHPPETKMFNERTSYTELNQMAEEARRRAE 882

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG+VES++RLKGL+ID+I Q+Y+V
Sbjct: 883 IARLRELHTLKGRVESVVRLKGLNIDTIQQAYTV 916

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|31580857|dbj|BAC77533.1| plasma membrane H+-ATPase [Sesbania rostrata]

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/213 (73%), Positives = 179/213 (84%)

Query: 2   TFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQ 61
           TFG+SSL+K++VDD RKLASA+YLQVS+ISQA +FVT ARSWSYV+ P L L  AF VAQ
Sbjct: 174 TFGVSSLHKRDVDDFRKLASAIYLQVSTISQALIFVTRARSWSYVERPGLLLVAAFIVAQ 233

Query: 62  LTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIE 121
           L ATLIAVYA WSFA IEGIGWGWAGV+WLYN+IFYI LDFIKF IRY LS   WDLVIE
Sbjct: 234 LIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYIPLDFIKFIIRYALSGKAWDLVIE 293

Query: 122 QRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAEI 181
           QR AFT K+DFGKEE E +WA  QRTLHGLHP +  MFS  ++Y E ++MAEEA RRAEI
Sbjct: 294 QRIAFTRKKDFGKEERELKWAHAQRTLHGLHPPEPRMFSERTNYTEFNQMAEEAKRRAEI 353

Query: 182 ARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           ARLRELHTLKG VES++RLKGLDID+I Q+Y+V
Sbjct: 354 ARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 386

Source: Sesbania rostrata

Species: Sesbania rostrata

Genus: Sesbania

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572262|ref|XP_003554288.1| PREDICTED: ATPase 11, plasma membrane-type-like [Glycine max]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 151/214 (70%), Positives = 176/214 (82%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           +TFG+SSL KK+ DD RKLASA+YLQVS++SQA +FVT ARSWS+V+ P L L  AF +A
Sbjct: 743 QTFGVSSLQKKDRDDFRKLASAIYLQVSTVSQALIFVTRARSWSFVERPGLLLVAAFVIA 802

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGV+WLYN++FYI LDFIKF IRY LS   WDLVI
Sbjct: 803 QLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLVFYIPLDFIKFIIRYALSGRAWDLVI 862

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT K+DFGKEE E +WA   RTLHGLHP +T MF+  +SY EL++MAEEA RRA 
Sbjct: 863 EQRIAFTRKKDFGKEERELKWAHAHRTLHGLHPPETKMFNERTSYTELNQMAEEARRRAN 922

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTL G VES+ RLKGLDID+I Q+Y++
Sbjct: 923 IARLRELHTLTGHVESVFRLKGLDIDTIQQAYTI 956

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461911|ref|XP_004148685.1| PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis sativus] gi|449505851|ref|XP_004162585.1| PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis sativus]

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 152/214 (71%), Positives = 176/214 (82%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           RTFG+SSL KK+ DD RKLASA+YLQVS+ISQA +FVT +RSWS+V+ P L L  AF +A
Sbjct: 743 RTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVAAFIIA 802

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGV+WLYN+IFY  LD IKF IRY +S   WDLVI
Sbjct: 803 QLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYFPLDIIKFAIRYAISGRAWDLVI 862

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT K+DFGKEE E +WA  QRTLHGL P +  MFS  ++Y EL++MAEEA RRAE
Sbjct: 863 EQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPEAKMFSDRTTYTELNQMAEEAKRRAE 922

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDI++I QSY+V
Sbjct: 923 IARLRELHTLKGHVESVVRLKGLDINTIQQSYTV 956

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|31580855|dbj|BAC77532.1| plasma membrane H+-ATPase [Sesbania rostrata]

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 151/214 (70%), Positives = 175/214 (81%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           R FG+++L K   DD RKLASA+YLQVS+ISQA +FVT +R WSYV+ P L L +AF VA
Sbjct: 743 RVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVVAFIVA 802

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA+WSFA IEGIGWGWAGVIWLYN+IFYI LDFIKF IRY LS   WDLVI
Sbjct: 803 QLIATLIAVYASWSFAAIEGIGWGWAGVIWLYNLIFYIPLDFIKFLIRYALSGRAWDLVI 862

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT ++DFGKE+ E +WA  QRTLHGL P DT MF+  +   EL++MAEEA RRAE
Sbjct: 863 EQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHVNELNQMAEEAKRRAE 922

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDID+I Q+Y+V
Sbjct: 923 IARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 956

Source: Sesbania rostrata

Species: Sesbania rostrata

Genus: Sesbania

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540887|ref|XP_002511508.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis] gi|223550623|gb|EEF52110.1| H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 150/214 (70%), Positives = 176/214 (82%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           R FG+S+L K   DD RKLASA+YLQVS+ISQA +FVT +RSWS+V+ P + L +AF +A
Sbjct: 588 RVFGVSTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLVVAFVIA 647

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA+WSFA IEGIGWGWAGVIWLYN+IFY  LDFIKFFIRY LS   WDLVI
Sbjct: 648 QLVATLIAVYASWSFAAIEGIGWGWAGVIWLYNLIFYFPLDFIKFFIRYALSGRAWDLVI 707

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT ++DFGKE+ E +WA  QRTLHGL P DT MF+  + + EL+ MAEEA RRAE
Sbjct: 708 EQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHFTELNNMAEEAKRRAE 767

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDID+I Q+Y+V
Sbjct: 768 IARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 801

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13016806|emb|CAC29435.1| P-type H+-ATPase [Vicia faba]

 Score =  312 bits (799), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 151/214 (70%), Positives = 174/214 (81%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           + FG+++L K   DD RKLASA+YLQVS+ISQA +FVT +R WSYV+ P L L  AF VA
Sbjct: 745 KVFGVATLEKYAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVAAFIVA 804

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA+WSFA IEGIGWGWAGVIWLYNIIFYI LDFIKFF RY LS   WDLVI
Sbjct: 805 QLIATLIAVYASWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFTRYALSGRAWDLVI 864

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT ++DFGKE+ E +WA  QRTLHGL P DT MF+  +   EL++MAEEA RRAE
Sbjct: 865 EQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHVTELNQMAEEAKRRAE 924

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDID+I Q+Y+V
Sbjct: 925 IARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 958

Source: Vicia faba

Species: Vicia faba

Genus: Vicia

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135653|ref|XP_002322127.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222869123|gb|EEF06254.1| autoinhibited H+ ATPase [Populus trichocarpa]

 Score =  311 bits (798), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 150/214 (70%), Positives = 174/214 (81%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           R FG+S+L K   DD RKLASA+YLQVS+ISQA +FVT +RSWSYV+ P + L +AF +A
Sbjct: 754 RVFGVSTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSYVERPGILLVVAFVIA 813

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGVIWLYNI+FYI LD IKF IRY LS   WDLVI
Sbjct: 814 QLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDLIKFIIRYALSGRAWDLVI 873

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFTT++DFGKE+ E +WA  QRTLHGL   DT MF+  + + EL+ MAEEA RRAE
Sbjct: 874 EQRIAFTTQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTERTHFTELNHMAEEAKRRAE 933

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDID+I Q+Y+V
Sbjct: 934 IARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 967

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30692952|ref|NP_190378.2| H(+)-ATPase 4 [Arabidopsis thaliana] gi|83305346|sp|Q9SU58.2|PMA4_ARATH RecName: Full=ATPase 4, plasma membrane-type; AltName: Full=Proton pump 4 gi|26451228|dbj|BAC42716.1| putative H+-transporting ATPase [Arabidopsis thaliana] gi|332644829|gb|AEE78350.1| H(+)-ATPase 4 [Arabidopsis thaliana]

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 151/214 (70%), Positives = 176/214 (82%)

Query: 1   RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
           RTFG+++L K   DD RKLASA+YLQVS ISQA +FVT +RSWS+V+ P +FL +AF +A
Sbjct: 747 RTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGIFLMIAFILA 806

Query: 61  QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
           QL ATLIAVYA WSFA IEGIGWGWAGVIWLYNIIFYI LDFIKFFIRY LS   WDLVI
Sbjct: 807 QLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVI 866

Query: 121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMAEEAIRRAE 180
           EQR AFT ++DFGKE+ E +WA  QRTLHGL   DT MF+  +   EL++MAEEA RRAE
Sbjct: 867 EQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAE 926

Query: 181 IARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           IARLRELHTLKG VES++RLKGLDI++I Q+Y+V
Sbjct: 927 IARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2097895	960	HA4 "H(+)-ATPase 4" [Arabidops	1.0	0.222	0.635	8e-69
TAIR|locus:2172244	956	HA11 "H(+)-ATPase 11" [Arabido	1.0	0.223	0.626	1.2e-67
TAIR|locus:2025727	954	HA9 "H(+)-ATPase 9" [Arabidops	0.971	0.218	0.558	2.3e-57
TAIR|locus:2046623	949	HA5 "H(+)-ATPase 5" [Arabidops	0.971	0.219	0.539	7.5e-56
TAIR|locus:2053343	949	HA6 "H(+)-ATPase 6" [Arabidops	0.967	0.218	0.533	1.2e-53
TAIR|locus:2044450	949	HA1 "H(+)-ATPase 1" [Arabidops	0.971	0.219	0.525	2.5e-53
TAIR|locus:2096549	948	HA8 "H(+)-ATPase 8" [Arabidops	0.967	0.218	0.532	6.6e-53
TAIR|locus:2165600	949	HA3 "H(+)-ATPase 3" [Arabidops	0.948	0.213	0.509	4.5e-50
TAIR|locus:2081932	961	HA7 "H(+)-ATPase 7" [Arabidops	0.915	0.203	0.474	6.8e-44
TAIR|locus:2020372	947	AHA10 "autoinhibited H(+)-ATPa	0.957	0.216	0.411	7.1e-35

TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 136/214 (63%), Positives = 161/214 (75%)

Query:     1 RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
             RTFG+++L K   DD RKLASA+YLQVS ISQA +FVT +RSWS+V+ P +FL +AF +A
Sbjct:   747 RTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGIFLMIAFILA 806

Query:    61 QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
             QL ATLIAVYA WSFA IEGIGWGWAGVIWLYNIIFYI LDFIKFFIRY LS   WDLVI
Sbjct:   807 QLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVI 866

Query:   121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMXXXXXXXXX 180
             EQR AFT ++DFGKE+ E +WA  QRTLHGL   DT MF+  +   EL++M         
Sbjct:   867 EQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAE 926

Query:   181 XXXXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
                    HTLKG VES++RLKGLDI++I Q+Y+V
Sbjct:   927 IARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=ISS

GO:0009651 "response to salt stress" evidence=IMP

GO:0007059 "chromosome segregation" evidence=RCA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0007129 "synapsis" evidence=RCA

GO:0007131 "reciprocal meiotic recombination" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0033044 "regulation of chromosome organization" evidence=RCA

GO:0042138 "meiotic DNA double-strand break formation" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 134/214 (62%), Positives = 157/214 (73%)

Query:     1 RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
             RTFG+S+L K   DD RKLASA+YLQVS ISQA +FVT +RSWSYV+ P + L +AF +A
Sbjct:   743 RTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERPGMLLVVAFILA 802

Query:    61 QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
             QL ATLIAVYA WSFA IEGIGWGWAGVIWLYNI+FYI LD IKF IRY LS   WDLVI
Sbjct:   803 QLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVI 862

Query:   121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMXXXXXXXXX 180
             EQR AFT ++DFGKE+ E +WA  QRTLHGL   D  MF   + + ELS+M         
Sbjct:   863 EQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFPERTHFNELSQMAEEAKRRAE 922

Query:   181 XXXXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
                    HTLKG VES++RLKGLDI++I Q+Y+V
Sbjct:   923 IARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 596 (214.9 bits), Expect = 2.3e-57, P = 2.3e-57
 Identities = 119/213 (55%), Positives = 151/213 (70%)

Query:     3 FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
             FG+ S++     +  +L +AVYLQVS +SQA +FVT +RSWSYV+ P  +L  AF +AQL
Sbjct:   746 FGVRSIS----GNPHELTAAVYLQVSIVSQALIFVTRSRSWSYVERPGFWLISAFFMAQL 801

Query:    63 TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
              ATLIAVYA W+FA I GIGWGWAGVIWLY+I+FYI LD +KF IRY LS   WD VIE 
Sbjct:   802 IATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILKFIIRYSLSGRAWDNVIEN 861

Query:   123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTS-MFSVESSYGELSRMXXXXXXXXXX 181
             +TAFT+K+D+GK E E +WAQ QRTLHGL P  TS MF+ +S+Y ELS +          
Sbjct:   862 KTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTYRELSEIADQAKRRAEV 921

Query:   182 XXXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
                   HTLKG VES+++ KGLDI++I Q Y++
Sbjct:   922 ARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;ISS

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=ISS

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0015992 "proton transport" evidence=ISS

TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 582 (209.9 bits), Expect = 7.5e-56, P = 7.5e-56
 Identities = 115/213 (53%), Positives = 150/213 (70%)

Query:     3 FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
             FG+  L+++      ++ +A+YLQVS ISQA +FVT +RSWSY +CP L L  AF +AQL
Sbjct:   741 FGVRPLSQRP----EQMMAALYLQVSIISQALIFVTRSRSWSYAECPGLLLLGAFVIAQL 796

Query:    63 TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
              AT IAVYA WSFA IEG GWGWAGVIWLY+ + YI LD +KF IRYVLS   W  ++E 
Sbjct:   797 VATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYVLSGKAWLNLLEN 856

Query:   123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRD-TSMFSVESSYGELSRMXXXXXXXXXX 181
             +TAFTTK+D+GKEE E +WA  QRTLHGL P +  ++F+ ++SY ELS++          
Sbjct:   857 KTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSELSQIAEQAKRRAEV 916

Query:   182 XXXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
                   +TLKG VES+++LKGLDID+I Q Y+V
Sbjct:   917 VRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 562 (202.9 bits), Expect = 1.2e-53, P = 1.2e-53
 Identities = 113/212 (53%), Positives = 144/212 (67%)

Query:     3 FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
             FG+ SL  K+     +L + +YLQVS ISQA +FVT +RSWS+V+ P L L +AF VAQL
Sbjct:   743 FGVRSLQGKD----EELIAVLYLQVSIISQALIFVTRSRSWSFVERPGLLLLIAFFVAQL 798

Query:    63 TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
              ATLIA YA W FA I+G GWGW GVIW+Y+I+ YI LD +KF  RY LS   W+ +IE 
Sbjct:   799 IATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFITRYTLSGKAWNNMIEN 858

Query:   123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMXXXXXXXXXXX 182
             RTAFTTK+D+G+ E E +WA  QRTLHGL P + SMF   ++Y ELS +           
Sbjct:   859 RTAFTTKKDYGRGEREAQWALAQRTLHGLKPPE-SMFEDTATYTELSEIAEQAKKRAEVA 917

Query:   183 XXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
                  HTLKG VES+++LKGLDID++ Q Y+V
Sbjct:   918 RLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 559 (201.8 bits), Expect = 2.5e-53, P = 2.5e-53
 Identities = 112/213 (52%), Positives = 143/213 (67%)

Query:     3 FGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQL 62
             FG+ S+   N D+   L  AVYLQVS ISQA +FVT +RSWS+V+ P   L +AF +AQL
Sbjct:   741 FGVRSIRDNN-DE---LMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFVIAQL 796

Query:    63 TATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQ 122
              ATLIAVYA W+FA ++GIGWGWAGVIW+Y+I+ Y   D +KF IRY+LS   W  + + 
Sbjct:   797 VATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRYILSGKAWASLFDN 856

Query:   123 RTAFTTKRDFGKEEHERRWAQEQRTLHGLHPR-DTSMFSVESSYGELSRMXXXXXXXXXX 181
             RTAFTTK+D+G  E E +WAQ QRTLHGL P+ D ++F  + SY ELS +          
Sbjct:   857 RTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYRELSEIAEQAKRRAEI 916

Query:   182 XXXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
                   HTLKG VES+ +LKGLDID+    Y+V
Sbjct:   917 ARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS;IDA

GO:0016021 "integral to membrane" evidence=IEA;IDA

GO:0016887 "ATPase activity" evidence=IEA;ISS;IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005773 "vacuole" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IDA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IDA

GO:0015992 "proton transport" evidence=TAS

TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 555 (200.4 bits), Expect = 6.6e-53, P = 6.6e-53
 Identities = 114/214 (53%), Positives = 147/214 (68%)

Query:     1 RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
             +TFG+ S+ + N ++   L +A+YLQVS ISQA +FVT +RSWS+V+ P   L +AF +A
Sbjct:   742 KTFGVRSI-QGNEEE---LMAALYLQVSIISQALIFVTRSRSWSFVERPGFLLLIAFVIA 797

Query:    61 QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
             QL ATLIAVYA W FA I G GWGWAG IW+Y+II YI LD +KF IRY L+   WD +I
Sbjct:   798 QLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIRYALTGKAWDNMI 857

Query:   121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMXXXXXXXXX 180
              Q+TAFTTK+D+GK E E +WA  QRTLHGL P + +MF+   +  ELS +         
Sbjct:   858 NQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE-AMFN--DNKNELSEIAEQAKRRAE 914

Query:   181 XXXXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
                    HTLKG VES+++LKGLDID+I Q Y+V
Sbjct:   915 VARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 4.5e-50, P = 4.5e-50
 Identities = 106/208 (50%), Positives = 136/208 (65%)

Query:     1 RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
             RTF +  L         ++ SA+YLQVS +SQA +FVT +RSWS+ + P  FL +AF VA
Sbjct:   740 RTFHVRDLRGSE----HEMMSALYLQVSIVSQALIFVTRSRSWSFTERPGYFLLIAFWVA 795

Query:    61 QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
             QL AT IAVY  W FA I+GIGWGWAGVIWLY+I+FY  LD +KF IRY+L+   W  +I
Sbjct:   796 QLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYILAGTAWKNII 855

Query:   121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVE-SSYGELSRMXXXXXXXX 179
             + RTAFTTK+++G EE E +WA  QRTLHGL   +T+    E   Y ELS +        
Sbjct:   856 DNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYRELSEIANQAKRRA 915

Query:   180 XXXXXXXXHTLKGQVESLIRLKGLDIDS 207
                     HTLKG VES+++LKGLDI++
Sbjct:   916 EIARLRELHTLKGHVESVVKLKGLDIET 943

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IDA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA;IDA

GO:0016887 "ATPase activity" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IDA

TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 472 (171.2 bits), Expect = 6.8e-44, P = 6.8e-44
 Identities = 94/198 (47%), Positives = 127/198 (64%)

Query:    18 KLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFAT 77
             ++ASAVYLQVS+ISQA +FVT +RSWS+V+ P   L +AF +AQL A++I+  A W FA 
Sbjct:   765 QMASAVYLQVSTISQALIFVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAG 824

Query:    78 IEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEH 137
             I  IGWGW GVIW++NI+ Y+LLD IKF +RY LS   WD ++E RTA T K++FG+EE 
Sbjct:   825 IRSIGWGWTGVIWIFNIVTYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEER 884

Query:   138 ERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMXXXXXXXXXXXXXXXXHTLKGQVESL 197
                WA E+RT HGL      ++   +S  EL+ M                 TLKG+VES 
Sbjct:   885 MAAWATEKRTQHGLETGQKPVYE-RNSATELNNMAEEAKRRAEIARMRELQTLKGKVESA 943

Query:   198 IRLKGLDI-DSILQSYSV 214
              +LKG D+ D    +Y++
Sbjct:   944 AKLKGYDLEDPNSNNYTI 961

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=ISS

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 7.1e-35, P = 7.1e-35
 Identities = 88/214 (41%), Positives = 125/214 (58%)

Query:     2 TFGISSLNKKNV-DDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVA 60
             TF     + K++ ++  +++SA+YLQVS ISQA +FVT +R WS+ + P   L  AF +A
Sbjct:   742 TFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPGTLLIFAFILA 801

Query:    61 QLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVI 120
             QL ATLIAVYA  SFA I GIGW WAGVIWLY++IFYI LD IKF   Y LS   W+LV+
Sbjct:   802 QLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYALSGEAWNLVL 861

Query:   121 EQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFSVESSYGELSRMXXXXXXXXX 180
             +++TAFT K+D+GK++        QR+         S   +  S    S +         
Sbjct:   862 DRKTAFTYKKDYGKDDGSPNVTISQRS--------RSAEELRGSRSRASWIAEQTRRRAE 913

Query:   181 XXXXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
                    H++   +ES+I+LK +D   I  +++V
Sbjct:   914 IARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006200 "ATP catabolic process" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0007033 "vacuole organization" evidence=IMP

GO:0007035 "vacuolar acidification" evidence=IMP

GO:0010023 "proanthocyanidin biosynthetic process" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0019829 "cation-transporting ATPase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SU58	PMA4_ARATH	3, ., 6, ., 3, ., 6	0.7056	1.0	0.2229	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AHA4	AHA4; ATPase/ hydrogen-exporting ATPase, phosphorylative mechanism; mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase ; The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses (By similarity) (960 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AVP1	AVP1; ATPase/ hydrogen-translocating pyrophosphatase; Encodes a H(+)-translocating (pyrophospha [...] (770 aa)						•	•		0.905
	AtPPa6	AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6); inorganic diphosphatase/ pyrophosphatase; En [...] (300 aa)						•			0.899
	AtPPa5	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5); inorganic diphosphatase/ pyrophosphatase; En [...] (216 aa)						•			0.899
	AtPPa4	AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatase; Encodes a soluble p [...] (216 aa)						•			0.899
	AtPPa3	AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3); inorganic diphosphatase/ pyrophosphatase; En [...] (216 aa)						•			0.899
	AtPPa2	AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2); inorganic diphosphatase/ pyrophosphatase; En [...] (218 aa)						•			0.899
	AVPL1	vacuolar-type H+-translocating inorganic pyrophosphatase, putative; vacuolar-type H+-translocat [...] (802 aa)						•			0.899
	AtPPa1	AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1); inorganic diphosphatase; Encodes a soluble p [...] (212 aa)						•			0.899
	PER66	peroxidase; encodes peroxidase involved in the lignification of tracheary elements (TE) in root [...] (322 aa)							•		0.677
	AT4G38510	vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump [...] (487 aa)							•		0.599

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
TIGR01647	754	TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e	2e-10

>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 23/53 (43%), Positives = 30/53 (56%)

Query: 18  KLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVY 70
            L S +YLQVS    A +FVT    + + + P   L  AF +AQ+ AT IAVY
Sbjct: 702 NLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
KOG0205	942	consensus Plasma membrane H+-transporting ATPase [	100.0
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	98.49
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	98.47
PRK15122	903	magnesium-transporting ATPase; Provisional	98.42
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	98.28
PF00689	182	Cation_ATPase_C: Cation transporting ATPase, C-ter	97.53
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	97.48
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	96.91
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	96.91
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	96.2
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	96.16
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	95.14

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.7e-61  Score=465.34  Aligned_cols=200  Identities=67%  Similarity=1.090  Sum_probs=194.8

Q ss_pred             CccCccccCcCCCCCccchHHHHHHHHHHhhhhheeeeecCCCCcccCChHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 048662            1 RTFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEG   80 (214)
Q Consensus         1 ~~fgv~~~~~~~~~~~~~lqT~~FLqlsis~qa~IFvtRtrg~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~   80 (214)
                      ++|||+++.+|..+    +.+++|||+|+++|++||+||+|+|||.++||.+|++|++.+|+++|+||+|++|.|+.+.+
T Consensus       743 ~~f~v~~~~~~~~~----~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliavya~w~~a~i~~  818 (942)
T KOG0205|consen  743 RTFGVRSLFGNEHE----LMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAVYANWSFARITG  818 (942)
T ss_pred             cccceeeccCCHHH----HHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHHHheecccceec
Confidence            47999999888774    99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccccccChhHHHHHHHHhhhhhhcCCCCCCcccc
Q 048662           81 IGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEHERRWAQEQRTLHGLHPRDTSMFS  160 (214)
Q Consensus        81 Igw~~~~~Iwly~iv~~l~lD~iK~~ir~~l~~~~~~~~~~~k~a~t~~~~~g~~~~~~~~a~~~~~l~~~~~~~~~~f~  160 (214)
                      |+|+|.+++|+|++++|+++|++|+.+||.++|++|++++++|++||+|||||+|+|++|||.+|||+||+|+++     
T Consensus       819 igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~~lq~~~-----  893 (942)
T KOG0205|consen  819 IGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE-----  893 (942)
T ss_pred             ceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhcccCCCc-----
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999995     


Q ss_pred             cccccchhhhhHHHHHhhhhHHhhhhhhhcchhhhHhhhhcCCChhhhcccccC
Q 048662          161 VESSYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLKGLDIDSILQSYSV  214 (214)
Q Consensus       161 ~~~~~~~~~~~~~~a~rr~~~a~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  214 (214)
                          -+|+|++|||+|||||+|||||+||||||||||+||||+|+|+| |||||
T Consensus       894 ----~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~  942 (942)
T KOG0205|consen  894 ----GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV  942 (942)
T ss_pred             ----cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence                17999999999999999999999999999999999999999999 99997

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=98.49  E-value=3.3e-07  Score=93.12  Aligned_cols=92  Identities=7%  Similarity=-0.012  Sum_probs=78.1

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCC-CCcccCChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARS-WSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIF   96 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg-~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~iv~   96 (214)
                      .+||++|+.+++++.+.+|+.|+++ +||+++|+..+++++++.+++++.+++.+...++++.|+|+.+..+.+++.+.+
T Consensus       770 ~~~t~~f~~~~~~~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~  849 (867)
T TIGR01524       770 LFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY  849 (867)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHH
Confidence            4799999999999999999999987 899999999999999999999999887543345789999888877777777777


Q ss_pred             HHHHHHHHH-HHHH
Q 048662           97 YILLDFIKF-FIRY  109 (214)
Q Consensus        97 ~l~lD~iK~-~ir~  109 (214)
                      .++.|+.|. ++|+
T Consensus       850 ~~~~e~~k~~~~~~  863 (867)
T TIGR01524       850 MATMQLVKTFYIRR  863 (867)
T ss_pred             HHHHHHHHHHHHHh
Confidence            778899998 4443

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=98.47  E-value=5.4e-07  Score=92.09  Aligned_cols=92  Identities=8%  Similarity=0.002  Sum_probs=79.5

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCC-CCcccCChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARS-WSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIF   96 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg-~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~iv~   96 (214)
                      .+|+++|+.+++++.+.+|++|+++ +||+++|+..+++++++.+++++.+++.+..+++++.|+|+.+..+.+++.+.+
T Consensus       805 ~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~  884 (902)
T PRK10517        805 LFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGY  884 (902)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHH
Confidence            4788999999999999999999997 899999999999999999999999995554556789999988888878887888


Q ss_pred             HHHHHHHHH-HHHH
Q 048662           97 YILLDFIKF-FIRY  109 (214)
Q Consensus        97 ~l~lD~iK~-~ir~  109 (214)
                      .++.++.|. ++|+
T Consensus       885 ~~~~e~~K~~~~~~  898 (902)
T PRK10517        885 MTLTQLVKGFYSRR  898 (902)
T ss_pred             HHHHHHHHHHHHHh
Confidence            888899998 4444

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=98.42  E-value=7e-07  Score=91.27  Aligned_cols=92  Identities=10%  Similarity=0.068  Sum_probs=79.5

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCC-CCcccCChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARS-WSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIF   96 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg-~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~iv~   96 (214)
                      .++|++|+.+++++.+.+|+.|+++ ++|+++|+...++++++.+++.+.+++.+...++++.|+|+...++++++++++
T Consensus       805 ~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~  884 (903)
T PRK15122        805 LFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGY  884 (903)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999986 889999999999999999999999987333345789999999888889999999


Q ss_pred             HHHHHHHHH-HHHH
Q 048662           97 YILLDFIKF-FIRY  109 (214)
Q Consensus        97 ~l~lD~iK~-~ir~  109 (214)
                      +++.++.|. ++|.
T Consensus       885 ~~~~e~~k~~~~r~  898 (903)
T PRK15122        885 CLVAQGMKRFYIRR  898 (903)
T ss_pred             HHHHHHHHHHHhhh
Confidence            999999997 4443

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=98.28  E-value=8.6e-07  Score=88.85  Aligned_cols=54  Identities=44%  Similarity=0.637  Sum_probs=51.6

Q ss_pred             cchHHHHHHHHHHhhhhheeeeecCCCCcccCChHHHHHHHHHHHHHHHHHHHH
Q 048662           17 RKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVY   70 (214)
Q Consensus        17 ~~lqT~~FLqlsis~qa~IFvtRtrg~fw~srPs~~Ll~A~l~a~liaTliAv~   70 (214)
                      ++.||++|+++++++++++|++|+++.+|.++||++|++++++++++++++++|
T Consensus       702 ~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~  755 (755)
T TIGR01647       702 GNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAVY  755 (755)
T ss_pred             hhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhhC
Confidence            369999999999999999999999999999999999999999999999999864

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=97.53  E-value=0.00021  Score=58.35  Aligned_cols=88  Identities=9%  Similarity=0.050  Sum_probs=69.7

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCC-CCcc-c--CChHHHHHHHHHHHHHHHHHHHHh-cccccccccCchHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARS-WSYV-K--CPVLFLALAFCVAQLTATLIAVYA-TWSFATIEGIGWGWAGVIWLY   92 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg-~fw~-s--rPs~~Ll~A~l~a~liaTliAv~g-~~~~~~m~~Igw~~~~~Iwly   92 (214)
                      +-||++|..+++++-+.+|+.|+++ ..|. .  +..++++.+.++..++..++.+.+ ...++++.++++...+++++.
T Consensus        89 ~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~~w~~~l~~  168 (182)
T PF00689_consen   89 QAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLWQWLICLAL  168 (182)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHHHHHHHHHH
Confidence            4899999999999999999999964 4554 2  357889999999888888888875 334578899998888888999


Q ss_pred             HHHHHHHHHHHHH
Q 048662           93 NIIFYILLDFIKF  105 (214)
Q Consensus        93 ~iv~~l~lD~iK~  105 (214)
                      +++.++..++.|.
T Consensus       169 ~~~~~~~~ei~K~  181 (182)
T PF00689_consen  169 ALLPFIVDEIRKL  181 (182)
T ss_dssp             HCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999886

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=97.48  E-value=0.00042  Score=71.74  Aligned_cols=91  Identities=12%  Similarity=0.208  Sum_probs=72.3

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCC-CCc-ccCChHHHHHHHHHHHHHHHHHHHHh-cccccccccCchHHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARS-WSY-VKCPVLFLALAFCVAQLTATLIAVYA-TWSFATIEGIGWGWAGVIWLYNI   94 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg-~fw-~srPs~~Ll~A~l~a~liaTliAv~g-~~~~~~m~~Igw~~~~~Iwly~i   94 (214)
                      +.+|++|+.+++++.+.+|..|+++ .+| .+.+.++|+.++++..++..++.+.+ ...++++.|++|.+.++++++++
T Consensus       891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~  970 (997)
T TIGR01106       891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL  970 (997)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence            4799999999999999999999975 344 44788899999998888888888876 34567899999988777788887


Q ss_pred             HHHHHHHHHHHHHH
Q 048662           95 IFYILLDFIKFFIR  108 (214)
Q Consensus        95 v~~l~lD~iK~~ir  108 (214)
                      ++++...+.|.+.|
T Consensus       971 ~~~~~~~~~k~~~r  984 (997)
T TIGR01106       971 LIFVYDEIRKLIIR  984 (997)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77655555555444

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=96.91  E-value=0.004  Score=63.80  Aligned_cols=90  Identities=9%  Similarity=0.005  Sum_probs=68.2

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCCCC-ccc--CChHHHHHHHHHHHHHHHHHHHHhc-ccccccccCchHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARSWS-YVK--CPVLFLALAFCVAQLTATLIAVYAT-WSFATIEGIGWGWAGVIWLYN   93 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg~f-w~s--rPs~~Ll~A~l~a~liaTliAv~g~-~~~~~m~~Igw~~~~~Iwly~   93 (214)
                      +-+|++|..+++++.+..|..|+++.+ |..  .+.++++.++++..++..++.+.+. ..+++..|++|...+++++++
T Consensus       787 ~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~  866 (884)
T TIGR01522       787 RDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLIT  866 (884)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence            468999999999999999999997654 332  3567888888887777766665543 356678999997767777777


Q ss_pred             HHHHHHHHHHHHHH
Q 048662           94 IIFYILLDFIKFFI  107 (214)
Q Consensus        94 iv~~l~lD~iK~~i  107 (214)
                      ++.++...+.|.+.
T Consensus       867 ~~~~~~~~~~k~~~  880 (884)
T TIGR01522       867 SSVCIVDEIRKKVE  880 (884)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77777777777643

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=96.91  E-value=0.003  Score=64.96  Aligned_cols=89  Identities=11%  Similarity=0.039  Sum_probs=69.7

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCCCC-ccc--CChHHHHHHHHHHHHHHHHHHHHhc-ccccccccCchHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARSWS-YVK--CPVLFLALAFCVAQLTATLIAVYAT-WSFATIEGIGWGWAGVIWLYN   93 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg~f-w~s--rPs~~Ll~A~l~a~liaTliAv~g~-~~~~~m~~Igw~~~~~Iwly~   93 (214)
                      +-+|+.|..+++++.+..|..|+++.. |..  .+.++++.++++..++..++.+.+. ..+++..|++|...+++++++
T Consensus       823 ~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~  902 (917)
T TIGR01116       823 PARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLS  902 (917)
T ss_pred             chHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHH
Confidence            468999999999999999999997543 432  2467888888888877777666553 246788999998888888888


Q ss_pred             HHHHHHHHHHHHH
Q 048662           94 IIFYILLDFIKFF  106 (214)
Q Consensus        94 iv~~l~lD~iK~~  106 (214)
                      ++.++..++.|++
T Consensus       903 ~~~~~~~e~~k~~  915 (917)
T TIGR01116       903 LPVILVDEVLKFF  915 (917)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888777888864

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=96.20  E-value=0.018  Score=60.51  Aligned_cols=91  Identities=18%  Similarity=0.080  Sum_probs=68.3

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCCC-Cccc-----------------CChHHHHHHHHHHHHHHHHHHHHhcc-c-ccc
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARSW-SYVK-----------------CPVLFLALAFCVAQLTATLIAVYATW-S-FAT   77 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg~-fw~s-----------------rPs~~Ll~A~l~a~liaTliAv~g~~-~-~~~   77 (214)
                      +-+|+.|..+++++.+.+|..|+++. +|..                 ...++|+.++++..++..++.+.+.. . +++
T Consensus       937 ~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~ 1016 (1053)
T TIGR01523       937 KARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFK 1016 (1053)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Confidence            56899999999999999999999853 3432                 13567888888888887777776655 2 678


Q ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048662           78 IEGIGWGWAGVIWLYNIIFYILLDFIKFFIRY  109 (214)
Q Consensus        78 m~~Igw~~~~~Iwly~iv~~l~lD~iK~~ir~  109 (214)
                      ..|++|.|.. +.+.+++.++..++.|.+.|.
T Consensus      1017 ~~~l~~~w~~-~~~~~~~~~~~~e~~K~~~r~ 1047 (1053)
T TIGR01523      1017 HKPIGAEWGL-AAAATIAFFFGAEIWKCGKRR 1047 (1053)
T ss_pred             cCCcchHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence            9999987754 566677777777888875443

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=96.16  E-value=0.017  Score=59.60  Aligned_cols=89  Identities=8%  Similarity=-0.035  Sum_probs=60.3

Q ss_pred             cchHHHHHHHHHHhhhhheeeeecCC--CCcccCC-hHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHH
Q 048662           17 RKLASAVYLQVSSISQAHLFVTHARS--WSYVKCP-VLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYN   93 (214)
Q Consensus        17 ~~lqT~~FLqlsis~qa~IFvtRtrg--~fw~srP-s~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~   93 (214)
                      .+.+|+.|..+++.+.+.+|..|+.+  .+|...+ .++++.++++..++..++..+ ...+++..|++|...+++.+.+
T Consensus       847 ~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~-~~~~f~~~~l~~~~w~~~~~~~  925 (941)
T TIGR01517       847 GELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF-GGSFFSTVSLSIEQWIGCVLLG  925 (941)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHH-HHHHhcccCCCHHHHHHHHHHH
Confidence            46899999999999999999999975  4664322 345666666666655444333 3456788999986555555555


Q ss_pred             HHHHHHHHHHHHH
Q 048662           94 IIFYILLDFIKFF  106 (214)
Q Consensus        94 iv~~l~lD~iK~~  106 (214)
                      ++.++...+.|++
T Consensus       926 ~~~~~~~~~~~~~  938 (941)
T TIGR01517       926 MLSLIFGVLLRLI  938 (941)
T ss_pred             HHHHHHHHHHHhc
Confidence            5555555666653

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.14  E-value=0.07  Score=55.26  Aligned_cols=84  Identities=17%  Similarity=0.205  Sum_probs=63.9

Q ss_pred             ccchHHHHHHHHHHhhhhheeeeecCCCCcccC---ChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHH
Q 048662           16 GRKLASAVYLQVSSISQAHLFVTHARSWSYVKC---PVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLY   92 (214)
Q Consensus        16 ~~~lqT~~FLqlsis~qa~IFvtRtrg~fw~sr---Ps~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly   92 (214)
                      ...++|++|..+++++++..|.+|+.+.+|.+.   +.+.++++.++..++..++.+++......+.+.++.  ..-|++
T Consensus       816 ~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~--~~~~~~  893 (917)
T COG0474         816 QALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLS--LFEWLI  893 (917)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCc--HHHHHH
Confidence            446999999999999999999999997777655   899999999999999999988886542234444444  455666


Q ss_pred             HHHHHHHHH
Q 048662           93 NIIFYILLD  101 (214)
Q Consensus        93 ~iv~~l~lD  101 (214)
                      .+.+..+..
T Consensus       894 ~~~~~~~~~  902 (917)
T COG0474         894 AIAVALLLL  902 (917)
T ss_pred             HHHHHHHHH
Confidence            665554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	214
3b8c_A	885	Crystal Structure Of A Plasma Membrane Proton Pump		5e-42
2o98_P	52	Structure Of The 14-3-3 H+-Atpase Plant Complex Len		3e-05
3m50_P	31	Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E		2e-04

>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885

Iteration: 1
 Score =  167 bits (422), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/140 (58%), Positives = 100/140 (71%), Gaps = 4/140 (2%)
Query: 2   TFGISSLNKKNVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQ 61
           TFG+ S+     D+  +L  AVYLQVS ISQA +FVT +RSWS+V+ P   L +AF +AQ
Sbjct: 740 TFGVRSIR----DNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQ 795
Query: 62  LTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIE 121
           L ATLIAVYA W FA I GIGWGWAGVIWLY+I+ Y  LD  KF IRY+LS   W  + E
Sbjct: 796 LIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFE 855
Query: 122 QRTAFTTKRDFGKEEHERRW 141
            +TAFT K+D+GKEE E +W
Sbjct: 856 NKTAFTMKKDYGKEEREAQW 875

>pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 163 SSYGELSRMXXXXXXXXXXXXXXXXHTLKGQVESLIRLKGLDIDSILQSYSV 214
           +++ EL+++                HTLKG VES+++LKGLDI++I QSY +
Sbjct: 1   TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52

>pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/27 (62%), Positives = 24/27 (88%)
Query: 188 HTLKGQVESLIRLKGLDIDSILQSYSV 214
           HTLKG VE++++LKGLDI++I QSY +
Sbjct: 5   HTLKGHVEAVVKLKGLDIETIQQSYDI 31
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	5e-38
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	7e-23
2o98_P	52	H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3,	4e-20
3m50_P	31	N.plumbaginifolia H+-translocating ATPase mRNA; al	3e-10

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885

 Score =  138 bits (350), Expect = 5e-38
 Identities = 79/138 (57%), Positives = 96/138 (69%)

Query: 12  NVDDGRKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYA 71
             D+  +L  AVYLQVS ISQA +FVT +RSWS+V+ P   L +AF +AQL ATLIAVYA
Sbjct: 746 IRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYA 805

Query: 72  TWSFATIEGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRD 131
            W FA I GIGWGWAGVIWLY+I+ Y  LD  KF IRY+LS   W  + E +TAFT K+D
Sbjct: 806 NWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKD 865

Query: 132 FGKEEHERRWAQEQRTLH 149
           +GKEE E +W +     H
Sbjct: 866 YGKEEREAQWMRGSHHHH 883

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920

 Score = 95.1 bits (237), Expect = 7e-23
 Identities = 18/131 (13%), Positives = 51/131 (38%), Gaps = 7/131 (5%)

Query: 19  LASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATI 78
           +   ++LQ+S      +F+T A    +   P   L+ A  +  + AT   ++  +  +  
Sbjct: 793 MDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHS-- 850

Query: 79  EGIGWGWAGVIWLYNIIFYILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEHE 138
                     IW+++   + ++  + + ++  +    +D ++  ++    ++    E+  
Sbjct: 851 -DTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVG---FDNLMHGKSPKGNQKQRSLEDFV 906

Query: 139 RRWAQEQRTLH 149
               Q   T H
Sbjct: 907 VSL-QRVSTQH 916

>2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52

 Score = 79.0 bits (194), Expect = 4e-20
 Identities = 34/52 (65%), Positives = 46/52 (88%)

Query: 163 SSYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           +++ EL+++AEEA RRAEIAR RELHTLKG VES+++LKGLDI++I QSY +
Sbjct: 1   TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52

>3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31

 Score = 52.6 bits (126), Expect = 3e-10
 Identities = 20/30 (66%), Positives = 27/30 (90%)

Query: 185 RELHTLKGQVESLIRLKGLDIDSILQSYSV 214
           RELHTLKG VE++++LKGLDI++I QSY +
Sbjct: 2   RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
2o98_P	52	H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3,	99.73
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	99.69
3m50_P	31	N.plumbaginifolia H+-translocating ATPase mRNA; al	99.63
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	99.06
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.8
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.28
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.02

>2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia}

Probab=99.73  E-value=1.2e-18  Score=119.82  Aligned_cols=51  Identities=67%  Similarity=1.019  Sum_probs=49.7

Q ss_pred             ccchhhhhHHHHHhhhhHHhhhhhhhcchhhhHhhhhcCCChhhhcccccC
Q 048662          164 SYGELSRMAEEAIRRAEIARLRELHTLKGQVESLIRLKGLDIDSILQSYSV  214 (214)
Q Consensus       164 ~~~~~~~~~~~a~rr~~~a~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  214 (214)
                      +|.++++++|+|++|+|++||||+||||||+||++|+||+|++.++++|||
T Consensus         2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv   52 (52)
T 2o98_P            2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI   52 (52)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred             chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence            578999999999999999999999999999999999999999999999997

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=99.69  E-value=6.9e-20  Score=183.16  Aligned_cols=130  Identities=59%  Similarity=1.040  Sum_probs=87.2

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCCCCcccCChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIFY   97 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~iv~~   97 (214)
                      +.+|.+|+.+++.+|+.+|++|++++||.++|+.++++++++.+++++++++|+.+.|+.+.|++|.+.+++|+++++++
T Consensus       752 ~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  831 (885)
T 3b8c_A          752 ELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTY  831 (885)
T ss_dssp             HHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999999999999999999877777799999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhccccccccccChhHHHHHHHHhhhh
Q 048662           98 ILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTKRDFGKEEHERRWAQEQRT  147 (214)
Q Consensus        98 l~lD~iK~~ir~~l~~~~~~~~~~~k~a~t~~~~~g~~~~~~~~a~~~~~  147 (214)
                      ++.|+.|++.|+.+++.+|++++++|++|+++||||+++|+++|+.+...
T Consensus       832 ~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  881 (885)
T 3b8c_A          832 FPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHH  881 (885)
T ss_dssp             HHHHHHHHHHTTC-------------------------------------
T ss_pred             HHHHHHHHHHHHhhhhccHhhhhccccccccchhcccccccccccccccc
Confidence            99999999999999999999999999999999999999999999987644

>3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P*

Probab=99.63  E-value=5.8e-17  Score=100.17  Aligned_cols=30  Identities=67%  Similarity=1.120  Sum_probs=29.5

Q ss_pred             hhhhhcchhhhHhhhhcCCChhhhcccccC
Q 048662          185 RELHTLKGQVESLIRLKGLDIDSILQSYSV  214 (214)
Q Consensus       185 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  214 (214)
                      ||+||||||||||+||||+|+|+|||||||
T Consensus         2 rElhTLkghvESv~KLKglDi~~i~~~yTV   31 (31)
T 3m50_P            2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI   31 (31)
T ss_dssp             HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred             chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence            899999999999999999999999999998

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=99.06  E-value=1.3e-10  Score=117.02  Aligned_cols=107  Identities=13%  Similarity=0.243  Sum_probs=93.2

Q ss_pred             cchHHHHHHHHHHhhhhheeeeecCCCCcccCChHHHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHH
Q 048662           17 RKLASAVYLQVSSISQAHLFVTHARSWSYVKCPVLFLALAFCVAQLTATLIAVYATWSFATIEGIGWGWAGVIWLYNIIF   96 (214)
Q Consensus        17 ~~lqT~~FLqlsis~qa~IFvtRtrg~fw~srPs~~Ll~A~l~a~liaTliAv~g~~~~~~m~~Igw~~~~~Iwly~iv~   96 (214)
                      ++.+|++|+.+++++.+.+|++|++++||.++|++++++++++.++++++++++|   ++...|++|.+.+.+|++++++
T Consensus       791 ~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~f~~~~l~~~~~~~~~~~~~~~  867 (920)
T 1mhs_A          791 GNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVVRIWIFSFGI  867 (920)
T ss_dssp             SSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS---STTSCSHHHHTHHHHHHHTTHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh---hhccCCCCHHHHHHHHHHHHHH
Confidence            4699999999999999999999999999999999999999999999999999887   4567899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhccccccc
Q 048662           97 YILLDFIKFFIRYVLSRNFWDLVIEQRTAFTTK  129 (214)
Q Consensus        97 ~l~lD~iK~~ir~~l~~~~~~~~~~~k~a~t~~  129 (214)
                      +++.|+.|++++.   .+.|+++.++|.+..++
T Consensus       868 ~~~~e~~k~~~~~---~~~fd~~~~~~~~~~~~  897 (920)
T 1mhs_A          868 FCIMGGVYYILQD---SVGFDNLMHGKSPKGNQ  897 (920)
T ss_dssp             HHHHHHHHHCCCC---CCTTHHHHHHHSTTTHH
T ss_pred             HHHHHHHHHHHhh---hHHHHHHhccCcccccc
Confidence            9999999973222   36888888877654333

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.80  E-value=1.6e-05  Score=80.61  Aligned_cols=92  Identities=12%  Similarity=0.215  Sum_probs=76.2

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCCC-Ccc-cCChHHHHHHHHHHHHHHHHHHHHhc-ccccccccCchHHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARSW-SYV-KCPVLFLALAFCVAQLTATLIAVYAT-WSFATIEGIGWGWAGVIWLYNI   94 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg~-fw~-srPs~~Ll~A~l~a~liaTliAv~g~-~~~~~m~~Igw~~~~~Iwly~i   94 (214)
                      +.||++|+.+++++.+.+|++|+++. +|. ..|+++|++++++..++..++.+.|. ..++++.|++|.+.++++++++
T Consensus       922 ~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1001 (1028)
T 2zxe_A          922 TCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSL 1001 (1028)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHH
Confidence            57999999999999999999999864 343 46899999999999999998888763 3567899999988888888888


Q ss_pred             HHHHHHHHHHHHHHH
Q 048662           95 IFYILLDFIKFFIRY  109 (214)
Q Consensus        95 v~~l~lD~iK~~ir~  109 (214)
                      +.+++.++.|++.|.
T Consensus      1002 ~~~~~~e~~k~~~r~ 1016 (1028)
T 2zxe_A         1002 IIFLYDEMRRFIIRR 1016 (1028)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc
Confidence            887777888876653

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.28  E-value=0.00041  Score=69.85  Aligned_cols=92  Identities=10%  Similarity=0.047  Sum_probs=72.4

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCC-CCccc--CChHHHHHHHHHHHHHHHHHHHHhc-ccccccccCchHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARS-WSYVK--CPVLFLALAFCVAQLTATLIAVYAT-WSFATIEGIGWGWAGVIWLYN   93 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg-~fw~s--rPs~~Ll~A~l~a~liaTliAv~g~-~~~~~m~~Igw~~~~~Iwly~   93 (214)
                      +.+|+.|..+++.+.+..|.+|++. ..|..  .++++|++++++..++..++.+.+. ..++++.|++|...+++++++
T Consensus       896 ~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~  975 (995)
T 3ar4_A          896 EPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKIS  975 (995)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence            4689999999999999999999864 33332  3578888888888888777777653 245678999998778888888


Q ss_pred             HHHHHHHHHHHHHHHH
Q 048662           94 IIFYILLDFIKFFIRY  109 (214)
Q Consensus        94 iv~~l~lD~iK~~ir~  109 (214)
                      ++++++.++.|++.|.
T Consensus       976 ~~~~~~~e~~k~~~r~  991 (995)
T 3ar4_A          976 LPVIGLDEILKFIARN  991 (995)
T ss_dssp             THHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            8888888888876553

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.02  E-value=0.0021  Score=65.08  Aligned_cols=91  Identities=10%  Similarity=0.211  Sum_probs=73.6

Q ss_pred             hHHHHHHHHHHhhhhheeeeecCC-CCcccC--ChHHHHHHHHHHHHHHHHHHHHhcc-cccccccCchHHHHHHHHHHH
Q 048662           19 LASAVYLQVSSISQAHLFVTHARS-WSYVKC--PVLFLALAFCVAQLTATLIAVYATW-SFATIEGIGWGWAGVIWLYNI   94 (214)
Q Consensus        19 lqT~~FLqlsis~qa~IFvtRtrg-~fw~sr--Ps~~Ll~A~l~a~liaTliAv~g~~-~~~~m~~Igw~~~~~Iwly~i   94 (214)
                      .+|+.|..+++.+.+.+|+.|+++ ..|...  ..++|++++++..++..++.+.+.. .+++..|++|.+.+++.++++
T Consensus       928 ~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1007 (1034)
T 3ixz_A          928 CYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGL 1007 (1034)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHH
Confidence            689999999999999999999975 456532  5678888888888887777766632 456889999998888888888


Q ss_pred             HHHHHHHHHHHHHHH
Q 048662           95 IFYILLDFIKFFIRY  109 (214)
Q Consensus        95 v~~l~lD~iK~~ir~  109 (214)
                      +.+++.++.|.+.|.
T Consensus      1008 ~~~~~~e~~K~~~r~ 1022 (1034)
T 3ixz_A         1008 LIFVYDEIRKLGVRC 1022 (1034)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            888888888887664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d1wpga4	472	Calcium ATPase, transmembrane domain M {Rabbit (Or	97.83

>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.83  E-value=1.3e-05  Score=71.90  Aligned_cols=96  Identities=10%  Similarity=0.060  Sum_probs=78.7

Q ss_pred             chHHHHHHHHHHhhhhheeeeecCC-CCcccC--ChHHHHHHHHHHHHHHHHHHHHhcc-cccccccCchHHHHHHHHHH
Q 048662           18 KLASAVYLQVSSISQAHLFVTHARS-WSYVKC--PVLFLALAFCVAQLTATLIAVYATW-SFATIEGIGWGWAGVIWLYN   93 (214)
Q Consensus        18 ~lqT~~FLqlsis~qa~IFvtRtrg-~fw~sr--Ps~~Ll~A~l~a~liaTliAv~g~~-~~~~m~~Igw~~~~~Iwly~   93 (214)
                      +-+|++|..+++++-+..|+.|+++ .+|...  ..+++++++++..++..++.+.+.. .++++.|+||.+.+++.+++
T Consensus       373 ~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~  452 (472)
T d1wpga4         373 EPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKIS  452 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHH
Confidence            4689999999999999999999975 456544  4578888999888887777776643 35689999999988899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhh
Q 048662           94 IIFYILLDFIKFFIRYVLSR  113 (214)
Q Consensus        94 iv~~l~lD~iK~~ir~~l~~  113 (214)
                      ++.+++.++.|++.|+..+|
T Consensus       453 ~~~~~~~El~K~~~R~~~~~  472 (472)
T d1wpga4         453 LPVIGLDEILKFIARNYLEG  472 (472)
T ss_dssp             THHHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHHHHhhcCCCC
Confidence            99999999999987776543