Citrus Sinensis ID: 048682

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-----
Protein Sequence
RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNLQQLNLPNN
Secondary Structure (PSIPRED)
ccccccccEEEEEccHHHHHHHHHccccEEEEccccccccccccccEEccccccccHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccHccEEEEEccHHHHHHHHHccccEEEEccccccHccHHHHHEHccccccccHHHHHHHHHcHHHcccccc
Coil and Loop (DISEMBL)
rlgisekdclVVEDSVIGLQAATRAGMACVITYtsstaeqdFKDAIaiypdlsnvRLKDLELLLQNLqqlnlpnn
Flexible Loop (DISEMBL)
rlgisekdclvVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLqnlqqlnlpnn
Low Complexity Region (SEG)
RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDlelllqnlqqlnlpnn
Disordered region (IsUnstruct)
*******DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNL********
Disordered Region (DISOPRED)
**GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN*********
Disordered Region (DISEMBL)
RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNLQQLNLPNN
Disordered Region (DISPRO)
*LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNLQQLNLPN*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNLQQLNLPNN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	75	2.2.26 [Sep-21-2011]
P40119	254	Protein CbbY, chromosomal	yes	no	0.72	0.212	0.425	3e-06
Q04541	254	Protein CbbY, plasmid OS=	yes	no	0.72	0.212	0.425	5e-06
P54607	220	Uncharacterized protein Y	yes	no	0.573	0.195	0.511	0.0005

>sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 54
           RLG+   DCL +EDS  GL+AA  AG+  V+T T+ +A+  F+ A+ + P L +
Sbjct: 167 RLGLEGGDCLAIEDSANGLRAARAAGIPTVVTPTAFSAQDSFEGALLVLPHLGD 220

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

>sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 54
           RLG+   DCL +EDS  GL+AA  AG+  V+T T+ +A+  F+ A+ + P L +
Sbjct: 167 RLGLEAGDCLAIEDSGNGLRAARAAGIPTVVTPTTFSAQDSFEGALLVLPHLGD 220

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

>sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 25/43 (58%)

Query: 2   LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 44
           LG+S  +CL  EDSV G  AA RAGM CVI     T    F+D
Sbjct: 154 LGVSPAECLAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFED 196

Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
296085644	192	unnamed protein product [Vitis vinifera]	0.893	0.348	0.925	4e-28
359496438	268	PREDICTED: protein CbbY, chromosomal-lik	0.893	0.25	0.925	6e-28
359496682	328	PREDICTED: protein CbbY-like [Vitis vini	0.893	0.204	0.925	6e-28
296088888	318	unnamed protein product [Vitis vinifera]	0.893	0.210	0.925	8e-28
255584279	309	2-deoxyglucose-6-phosphate phosphatase,	0.893	0.216	0.895	2e-27
356525461	323	PREDICTED: protein CbbY, chromosomal-lik	0.893	0.207	0.880	6e-27
356512689	310	PREDICTED: protein CbbY, chromosomal-lik	0.893	0.216	0.880	6e-27
255639539	310	unknown [Glycine max]	0.893	0.216	0.880	6e-27
224093744	261	predicted protein [Populus trichocarpa]	0.853	0.245	0.906	1e-25
449451423	309	PREDICTED: protein CbbY-like [Cucumis sa	0.893	0.216	0.805	2e-24

>gi|296085644|emb|CBI29443.3| unnamed protein product [Vitis vinifera]

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           RLG+SEKDCLVVEDSVIGLQAAT AGM+CVITYTSSTA+QDFKDAIAIYPDLSNVRLKDL
Sbjct: 122 RLGVSEKDCLVVEDSVIGLQAATGAGMSCVITYTSSTADQDFKDAIAIYPDLSNVRLKDL 181

Query: 61  ELLLQNL 67
           ELLLQN+
Sbjct: 182 ELLLQNV 188

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496438|ref|XP_003635236.1| PREDICTED: protein CbbY, chromosomal-like [Vitis vinifera]

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           RLG+SEKDCLVVEDSVIGLQAAT AGM+CVITYTSSTA+QDFKDAIAIYPDLSNVRLKDL
Sbjct: 198 RLGVSEKDCLVVEDSVIGLQAATGAGMSCVITYTSSTADQDFKDAIAIYPDLSNVRLKDL 257

Query: 61  ELLLQNL 67
           ELLLQN+
Sbjct: 258 ELLLQNV 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496682|ref|XP_003635299.1| PREDICTED: protein CbbY-like [Vitis vinifera]

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           RLG+SEKDCLVVEDSVIGLQAAT AGM+CVITYTSSTA+QDFKDAIAIYPDLSNVRLKDL
Sbjct: 258 RLGVSEKDCLVVEDSVIGLQAATGAGMSCVITYTSSTADQDFKDAIAIYPDLSNVRLKDL 317

Query: 61  ELLLQNL 67
           ELLLQN+
Sbjct: 318 ELLLQNV 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088888|emb|CBI38432.3| unnamed protein product [Vitis vinifera]

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 62/67 (92%), Positives = 66/67 (98%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           RLG+SEKDCLVVEDSVIGLQAAT AGM+CVITYTSSTA+QDFKDAIAIYPDLSNVRLKDL
Sbjct: 248 RLGVSEKDCLVVEDSVIGLQAATGAGMSCVITYTSSTADQDFKDAIAIYPDLSNVRLKDL 307

Query: 61  ELLLQNL 67
           ELLLQN+
Sbjct: 308 ELLLQNV 314

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584279|ref|XP_002532876.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223527361|gb|EEF29505.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/67 (89%), Positives = 67/67 (100%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           +LG+SEKDCLVVEDSVIGLQAAT+AGM+CVITYTSSTA+QDFKDAIA+YPDLSNVRLKDL
Sbjct: 239 KLGVSEKDCLVVEDSVIGLQAATKAGMSCVITYTSSTADQDFKDAIAMYPDLSNVRLKDL 298

Query: 61  ELLLQNL 67
           ELLLQN+
Sbjct: 299 ELLLQNV 305

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525461|ref|XP_003531343.1| PREDICTED: protein CbbY, chromosomal-like [Glycine max]

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/67 (88%), Positives = 66/67 (98%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           +LGISEKDCLVVEDSVIGLQAAT+AGM+CV+TYT STAEQDFK+AIAIYPDLSNVRLKDL
Sbjct: 253 KLGISEKDCLVVEDSVIGLQAATQAGMSCVVTYTPSTAEQDFKEAIAIYPDLSNVRLKDL 312

Query: 61  ELLLQNL 67
           ELLLQ++
Sbjct: 313 ELLLQDV 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512689|ref|XP_003525049.1| PREDICTED: protein CbbY, chromosomal-like [Glycine max]

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/67 (88%), Positives = 66/67 (98%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           +LGISEKDCLVVEDSVIGLQAAT+AGM+CV+TYT STAEQDFK+AIAIYPDLSNVRLKDL
Sbjct: 240 KLGISEKDCLVVEDSVIGLQAATQAGMSCVVTYTPSTAEQDFKEAIAIYPDLSNVRLKDL 299

Query: 61  ELLLQNL 67
           ELLLQ++
Sbjct: 300 ELLLQDV 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255639539|gb|ACU20064.1| unknown [Glycine max]

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/67 (88%), Positives = 66/67 (98%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           +LGISEKDCLVVEDSVIGLQAAT+AGM+CV+TYT STAEQDFK+AIAIYPDLSNVRLKDL
Sbjct: 240 KLGISEKDCLVVEDSVIGLQAATQAGMSCVVTYTPSTAEQDFKEAIAIYPDLSNVRLKDL 299

Query: 61  ELLLQNL 67
           ELLLQ++
Sbjct: 300 ELLLQDV 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093744|ref|XP_002309972.1| predicted protein [Populus trichocarpa] gi|222852875|gb|EEE90422.1| predicted protein [Populus trichocarpa]

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/64 (90%), Positives = 62/64 (96%)

Query: 2   LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 61
           LG+SE+DCLVVEDSVIGLQAAT AGM+CVITYT STA+QDFKDAIAIYPDLSNVRLKDLE
Sbjct: 198 LGVSERDCLVVEDSVIGLQAATTAGMSCVITYTPSTADQDFKDAIAIYPDLSNVRLKDLE 257

Query: 62  LLLQ 65
           LLLQ
Sbjct: 258 LLLQ 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451423|ref|XP_004143461.1| PREDICTED: protein CbbY-like [Cucumis sativus] gi|449520016|ref|XP_004167030.1| PREDICTED: protein CbbY-like [Cucumis sativus]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 63/67 (94%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           +LG+SEKDCLVVEDSVIGLQAAT+AGM CVITYT+STA QDFK+AIA YPDLS++RLKDL
Sbjct: 239 KLGVSEKDCLVVEDSVIGLQAATKAGMQCVITYTTSTANQDFKEAIATYPDLSDIRLKDL 298

Query: 61  ELLLQNL 67
           + LLQN+
Sbjct: 299 DSLLQNV 305

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
TAIR|locus:2140050	316	AT4G39970 [Arabidopsis thalian	0.786	0.186	0.813	5.5e-22
TAIR|locus:2101165	319	AT3G48420 [Arabidopsis thalian	0.64	0.150	0.5	2.5e-08
TIGR_CMR|DET_0395	456	DET_0395 "glycoprotease family	0.773	0.127	0.389	0.00011
TAIR|locus:2010728	1055	AT1G56500 [Arabidopsis thalian	0.76	0.054	0.366	0.0004

TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 48/59 (81%), Positives = 57/59 (96%)

Query:     1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
             +LG+S KDCLVVEDSVIGLQAAT+AGM+CVITYTSST++Q+F DAIA+YPDLSNV+LKD
Sbjct:   246 KLGVSVKDCLVVEDSVIGLQAATKAGMSCVITYTSSTSDQNFNDAIAVYPDLSNVKLKD 304

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 24/48 (50%), Positives = 35/48 (72%)

Query:     2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 49
             LG+    C+VVEDS IGL AA  AGM C++T +  TA++DF++A A++
Sbjct:   246 LGVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGYTADEDFENADAVF 293

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TIGR_CMR|DET_0395 DET_0395 "glycoprotease family protein/hydrolase, beta-phosphoglucomutase family" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query:     1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
             RL  S ++CLV+ED+  G++AA +AGM C I  T+S   Q   +A  I   L  + ++D
Sbjct:   388 RLCASPEECLVIEDAPAGVEAAKKAGMKC-IAVTNSQQPQALSEADMIVDTLGKISVED 445

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0006508 "proteolysis" evidence=ISS

GO:0008233 "peptidase activity" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

TAIR|locus:2010728 AT1G56500 [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 0.00040, P = 0.00040
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query:     2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDA--IAIYPDLSNVRLKD 59
             LG+   +C+V+ED++ G+QAA  A M C+   T+  +E   KDA    I  D+ N+ + D
Sbjct:   230 LGVPTSECVVIEDALAGVQAAQAANMRCIAVKTT-LSEAILKDAGPSMIRDDIGNISIND 288


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       75        59   0.00091  102 3  11 22  0.48    27
                                                     29  0.49    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  412 (44 KB)
  Total size of DFA:  68 KB (2060 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.36u 0.15s 7.51t   Elapsed:  00:00:00
  Total cpu time:  7.36u 0.15s 7.51t   Elapsed:  00:00:00
  Start:  Sat May 11 14:08:45 2013   End:  Sat May 11 14:08:45 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0009773 "photosynthetic electron transport in photosystem I" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.VII.1749.1	haloacid dehalogenase-like hydrolase family protein (EC-2.7.7.2) (261 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIX.851.1	hypothetical protein (317 aa)			•	•			•		0.475

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	75
PLN02779	286	PLN02779, PLN02779, haloacid dehalogenase-like hyd	5e-33
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	1e-10
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	7e-08
PRK10725	188	PRK10725, PRK10725, fructose-1-P/6-phosphogluconat	3e-05
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	5e-05
PLN02940	382	PLN02940, PLN02940, riboflavin kinase	1e-04
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	4e-04
PRK11587	218	PRK11587, PRK11587, putative phosphatase; Provisio	5e-04
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	5e-04

>gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein

 Score =  114 bits (286), Expect = 5e-33
 Identities = 33/66 (50%), Positives = 45/66 (68%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
            LG+    C+VVEDSVIGLQAA  AGM C++T +S TA++DF  A A++  L +V L+D 
Sbjct: 214 TLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDF 273

Query: 61  ELLLQN 66
           +LL   
Sbjct: 274 DLLFCE 279

Length = 286

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 54.0 bits (130), Expect = 1e-10
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           RLG+  ++C+VVEDS  G+QAA  AGM  V    +           A   D   + L +L
Sbjct: 154 RLGVDPEECVVVEDSPAGIQAAKAAGMRVVG-VPAGHDRPHLDPLDAHGADTVLLDLAEL 212

Query: 61  ELLL 64
             LL
Sbjct: 213 PALL 216

Length = 221

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 47.2 bits (112), Expect = 7e-08
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)

Query: 2   LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDA--IAIYPDLSNVRLKD 59
           LG+   +C+V+ED++ G+QAA  AGM C I  T++ +E+  KDA    I  D+ N+ L D
Sbjct: 231 LGVPTSECVVIEDALAGVQAARAAGMRC-IAVTTTLSEEILKDAGPSLIRKDIGNISLSD 289

Query: 60  L 60
           +
Sbjct: 290 I 290

Length = 1057

>gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional

 Score = 39.3 bits (92), Expect = 3e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV 30
            +G+    C+V ED+  G+QAA  AGM  V
Sbjct: 154 LMGVQPTQCVVFEDADFGIQAARAAGMDAV 183

Length = 188

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 36.9 bits (86), Expect = 5e-05
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 1  RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
          RLG+  ++C+++ DS   + AA  AG+  ++  T  T  +D + A    PD     L DL
Sbjct: 16 RLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERA-PGRPDYVVDSLADL 74

Length = 74

>gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 56
           RL +   +CLV+EDS+ G+ A   AGM  +   +       +  A  +   L +++
Sbjct: 162 RLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQ 217

Length = 382

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV 30
            LG+   +C+V ED++ G+QAA  AGM  V
Sbjct: 154 LLGVPPNECIVFEDALAGVQAARAAGMFAV 183

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 16/70 (22%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
            LG++ ++C+VVED+  G+ +   AG  C +              IA+       RL ++
Sbjct: 150 LLGLAPQECVVVEDAPAGVLSGLAAG--CHV--------------IAVNAPADTPRLDEV 193

Query: 61  ELLLQNLQQL 70
           +L+L +L+QL
Sbjct: 194 DLVLHSLEQL 203

Length = 218

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 35.9 bits (83), Expect = 5e-04
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV 30
           +LG+   +CL V+DS  G+ AA  AGM  V
Sbjct: 146 KLGLKPSECLFVDDSPAGIDAAKAAGMHTV 175

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	75
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.54
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.52
PLN02575	381	haloacid dehalogenase-like hydrolase	99.42
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.41
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.41
PRK11587	218	putative phosphatase; Provisional	99.4
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.39
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.39
PLN02811	220	hydrolase	99.39
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.39
COG0546	220	Gph Predicted phosphatases [General function predi	99.38
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.38
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.37
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.37
PRK13288	214	pyrophosphatase PpaX; Provisional	99.36
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.34
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.33
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.31
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.3
PRK06769	173	hypothetical protein; Validated	99.29
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.29
PLN02940	382	riboflavin kinase	99.29
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.26
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.25
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.24
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.21
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.21
PLN02645	311	phosphoglycolate phosphatase	99.2
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.2
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.2
PRK10444	248	UMP phosphatase; Provisional	99.19
PRK09449	224	dUMP phosphatase; Provisional	99.16
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.16
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.14
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.12
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.1
PHA02597	197	30.2 hypothetical protein; Provisional	99.08
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.08
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.07
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.07
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.05
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.02
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	98.99
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	98.97
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.96
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	98.96
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	98.96
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	98.9
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	98.9
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	98.9
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.88
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.88
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	98.87
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	98.85
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.75
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	98.75
PHA02530	300	pseT polynucleotide kinase; Provisional	98.73
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	98.64
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	98.63
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.63
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.62
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.6
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	98.58
PLN02954	224	phosphoserine phosphatase	98.57
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	98.55
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.53
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.5
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.5
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.49
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.47
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.46
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.43
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	98.41
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.38
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	98.31
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.3
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.28
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	98.25
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	98.19
PRK11133	322	serB phosphoserine phosphatase; Provisional	98.17
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	98.15
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.1
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	98.09
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.07
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	98.04
COG0241	181	HisB Histidinol phosphatase and related phosphatas	97.91
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	97.85
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	97.83
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.81
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.77
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.76
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.76
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	97.75
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	97.69
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.68
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.68
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.67
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	97.58
PTZ00445	219	p36-lilke protein; Provisional	97.56
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	97.55
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	97.55
PRK10671	834	copA copper exporting ATPase; Provisional	97.48
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	97.44
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	97.41
PRK10513	270	sugar phosphate phosphatase; Provisional	97.41
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	97.38
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	97.22
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	97.19
PRK10976	266	putative hydrolase; Provisional	97.15
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.15
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.09
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.02
COG4229	229	Predicted enolase-phosphatase [Energy production a	97.02
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.96
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	96.88
PLN02887	580	hydrolase family protein	96.87
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	96.78
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	96.73
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	96.73
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	96.67
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.62
PRK08238	479	hypothetical protein; Validated	96.56
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.51
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.41
PLN02382	413	probable sucrose-phosphatase	96.3
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	96.24
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	96.18
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	95.85
COG4087	152	Soluble P-type ATPase [General function prediction	95.79
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	95.48
COG3700	237	AphA Acid phosphatase (class B) [General function	95.42
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	95.41
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	95.36
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	94.96
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	94.42
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	94.01
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	93.7
PLN02423	245	phosphomannomutase	92.87
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	92.4
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	92.12
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	91.8
COG5663	194	Uncharacterized conserved protein [Function unknow	91.69
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	91.57
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	91.53
COG4359	220	Uncharacterized conserved protein [Function unknow	91.41
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	91.27
PLN02580	384	trehalose-phosphatase	90.45
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	88.96
PTZ00174	247	phosphomannomutase; Provisional	87.59
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	86.69
COG4030	315	Uncharacterized protein conserved in archaea [Func	85.03
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	83.16
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	81.28
PLN03190	1178	aminophospholipid translocase; Provisional	80.96

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.54  E-value=7.4e-15  Score=78.00  Aligned_cols=54  Identities=26%  Similarity=0.473  Sum_probs=46.4

Q ss_pred             CCCCCCcEEEEecC-HHhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs-~~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+ .+||++|+++|+.+|+|.+|....+..    ..++++++++.|+
T Consensus        17 ~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~   75 (75)
T PF13242_consen   17 LGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA   75 (75)
T ss_dssp             HTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred             cCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence            57889999999999 899999999999999999988665443    4789999998763

...

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.52  E-value=2.8e-14  Score=91.90  Aligned_cols=63  Identities=52%  Similarity=0.856  Sum_probs=55.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~   64 (75)
                      +|++|++|+|||||.+|+++|++|||++|++.+++.....+..++++++++.++.+..++-++
T Consensus       215 ~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~~~~  277 (286)
T PLN02779        215 LGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFDLLF  277 (286)
T ss_pred             hCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchhhhHHHH
Confidence            688999999999999999999999999999998876555556789999999999988887654

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.42  E-value=2.8e-13  Score=90.39  Aligned_cols=64  Identities=23%  Similarity=0.325  Sum_probs=53.1

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ   65 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~   65 (75)
                      ++|++|++|+|||||..|++||++|||++|+|.++... ..+..++++++++.++.+..+++++.
T Consensus       284 ~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~-~~l~~Ad~iI~s~~EL~~~~l~~l~~  347 (381)
T PLN02575        284 LLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPI-YELGAADLVVRRLDELSIVDLKNLAD  347 (381)
T ss_pred             HcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCh-hHhcCCCEEECCHHHHHHHHHhhhhh
Confidence            47899999999999999999999999999999876433 33456888999999998877766543

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.41  E-value=3.6e-13  Score=85.02  Aligned_cols=56  Identities=27%  Similarity=0.293  Sum_probs=46.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhh-hhccceeeCCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD-FKDAIAIYPDLSNVR   56 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~-~~~~~~~~~~~~~l~   56 (75)
                      +++++|++|+|||||..|+++|++|||++|++.|+...... ...++++++++.++.
T Consensus       176 ~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~  232 (248)
T PLN02770        176 VLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK  232 (248)
T ss_pred             HhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence            36889999999999999999999999999999987643222 246889999999864

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.41  E-value=2.6e-13  Score=87.09  Aligned_cols=62  Identities=18%  Similarity=0.190  Sum_probs=50.8

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCCCHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~   64 (75)
                      ++++|++|+|||||..|+++|++|||.+|++.++......+  ..++++++++.++ +..+.+++
T Consensus       208 ~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL-~~~~~~~~  271 (273)
T PRK13225        208 EGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL-LQAVTQLM  271 (273)
T ss_pred             hCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH-HHHHHHHh
Confidence            57899999999999999999999999999999987654433  4688999998887 55554443

>PRK11587 putative phosphatase; Provisional

Probab=99.40  E-value=5e-13  Score=82.69  Aligned_cols=57  Identities=19%  Similarity=0.416  Sum_probs=47.6

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLK   58 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~   58 (75)
                      ++|++|++|+|||||..|+++|++|||++|++.++... .....++++++++.++...
T Consensus       150 ~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~~~~~el~~~  206 (218)
T PRK11587        150 LLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADT-PRLDEVDLVLHSLEQLTVT  206 (218)
T ss_pred             HcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCch-hhhccCCEEecchhheeEE
Confidence            37899999999999999999999999999999876532 2345678899999888543

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.39  E-value=4.1e-13  Score=85.66  Aligned_cols=61  Identities=23%  Similarity=0.371  Sum_probs=48.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   62 (75)
                      ++|++|++|+|||||.+|+++|++|||++|++. +......+..++++++++.++....+..
T Consensus       177 ~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l~~ad~vi~~~~el~~~~~~~  237 (260)
T PLN03243        177 RLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYELSAGDLVVRRLDDLSVVDLKN  237 (260)
T ss_pred             HhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhhccCCEEeCCHHHHHHHHHhh
Confidence            368999999999999999999999999999997 4433334556788999998885554443

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.39  E-value=6.9e-13  Score=84.31  Aligned_cols=63  Identities=21%  Similarity=0.300  Sum_probs=49.3

Q ss_pred             CCCCC-CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc-----------------------hhhh--hccceeeCCCCC
Q 048682            1 RLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSSTA-----------------------EQDF--KDAIAIYPDLSN   54 (75)
Q Consensus         1 ~l~~~-p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~-----------------------~~~~--~~~~~~~~~~~~   54 (75)
                      ++|+. |++|+|||||.+|+++|++|||++|+|.+++..                       ...+  ..++++++++.+
T Consensus       170 ~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~  249 (267)
T PRK13478        170 ELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIAD  249 (267)
T ss_pred             HcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHH
Confidence            36775 699999999999999999999999999988752                       1222  468899999988


Q ss_pred             CCHHHHHHHH
Q 048682           55 VRLKDLELLL   64 (75)
Q Consensus        55 l~~~~l~~~~   64 (75)
                      + .+.+..+.
T Consensus       250 l-~~~l~~~~  258 (267)
T PRK13478        250 L-PAVIADIE  258 (267)
T ss_pred             H-HHHHHHHH
Confidence            8 45554433

>PLN02811 hydrolase

Probab=99.39  E-value=5.1e-13  Score=82.81  Aligned_cols=57  Identities=25%  Similarity=0.337  Sum_probs=48.2

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHH
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD   59 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~   59 (75)
                      |++|++|+||||+..|+++|++|||++|++.++.........++++++++.++....
T Consensus       154 ~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~~  210 (220)
T PLN02811        154 PVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPEE  210 (220)
T ss_pred             CCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHHH
Confidence            489999999999999999999999999999887654434456788999999887655

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.39  E-value=4.4e-13  Score=80.86  Aligned_cols=55  Identities=20%  Similarity=0.212  Sum_probs=45.3

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeE-EEEcCCCCchhhh-hccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~-i~v~~~~~~~~~~-~~~~~~~~~~~~l   55 (75)
                      +++++|++|+|||||.+|+++|++||+++ +++.++....... ..++++++++.++
T Consensus       118 ~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el  174 (176)
T TIGR00213       118 ELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL  174 (176)
T ss_pred             HcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence            36899999999999999999999999998 7998876532222 3588999988776

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.38  E-value=4.6e-13  Score=83.26  Aligned_cols=54  Identities=24%  Similarity=0.311  Sum_probs=45.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh--hhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ--DFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~--~~~~~~~~~~~~~~l   55 (75)
                      ++++|++++|||||.+|+++|++||+++|+|.|++....  ....++++++++.++
T Consensus       158 ~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el  213 (220)
T COG0546         158 LGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAEL  213 (220)
T ss_pred             hCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence            567788999999999999999999999999999985222  235689999998777

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.38  E-value=6e-13  Score=83.83  Aligned_cols=55  Identities=25%  Similarity=0.331  Sum_probs=45.2

Q ss_pred             CCCCC-CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc-----------------------hhhh--hccceeeCCCCC
Q 048682            1 RLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSSTA-----------------------EQDF--KDAIAIYPDLSN   54 (75)
Q Consensus         1 ~l~~~-p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~-----------------------~~~~--~~~~~~~~~~~~   54 (75)
                      ++++. |++|+|||||++|+++|++|||++|+|.+++..                       ...+  ..++++++++.+
T Consensus       168 ~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~e  247 (253)
T TIGR01422       168 ELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAE  247 (253)
T ss_pred             HcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHH
Confidence            36774 999999999999999999999999999988752                       1222  357899999877


Q ss_pred             C
Q 048682           55 V   55 (75)
Q Consensus        55 l   55 (75)
                      +
T Consensus       248 l  248 (253)
T TIGR01422       248 L  248 (253)
T ss_pred             H
Confidence            6

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.37  E-value=9.6e-13  Score=82.13  Aligned_cols=61  Identities=34%  Similarity=0.428  Sum_probs=43.4

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   62 (75)
                      +||++|++||+||||.+|++||++|||.+|++..+.... ..........+.....+..+..
T Consensus       154 ~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~  214 (221)
T COG0637         154 RLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRP-HLDPLDAHGADTVLLDLAELPA  214 (221)
T ss_pred             HcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCcc-ccchhhhhhcchhhccHHHHHH
Confidence            478999999999999999999999999999998743321 2223334444444444455443

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.37  E-value=7.9e-13  Score=80.91  Aligned_cols=55  Identities=20%  Similarity=0.256  Sum_probs=46.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +++++|++|+||||+.+|+++|+++||++|++.|++.....+  ..++++++++.++
T Consensus       143 ~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l  199 (205)
T TIGR01454       143 LLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL  199 (205)
T ss_pred             HcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence            368899999999999999999999999999999998655443  3578888887665

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.36  E-value=8.5e-13  Score=81.23  Aligned_cols=55  Identities=16%  Similarity=0.176  Sum_probs=45.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +++++|++|+|||||.+|+++|++|||++|++.|+......+  ..++++++++.++
T Consensus       150 ~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l  206 (214)
T PRK13288        150 LLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDL  206 (214)
T ss_pred             HcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence            367899999999999999999999999999999986544333  3578888887766

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.34  E-value=8.7e-13  Score=82.32  Aligned_cols=55  Identities=25%  Similarity=0.321  Sum_probs=45.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh-h--hhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-D--FKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~-~--~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+||||+.+|+++|++|||++|++.|++.... .  ...++++++++.++
T Consensus       163 ~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (229)
T PRK13226        163 RIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL  220 (229)
T ss_pred             HhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence            3689999999999999999999999999999998875221 2  24588899888766

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.33  E-value=1.2e-12  Score=80.06  Aligned_cols=55  Identities=25%  Similarity=0.368  Sum_probs=45.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +++++|++|+|||||.+|+++|++|||++|++.+++.....+  ..++++++++.++
T Consensus       153 ~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l  209 (213)
T TIGR01449       153 RLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL  209 (213)
T ss_pred             HcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence            368899999999999999999999999999999877543322  4578888888765

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.31  E-value=4.2e-12  Score=81.39  Aligned_cols=54  Identities=17%  Similarity=0.284  Sum_probs=45.9

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhh----------ccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----------DAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~----------~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+. +||++|+++||++|+|.||....+.+.          .++++++++.++
T Consensus       215 ~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l  279 (279)
T TIGR01452       215 FSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL  279 (279)
T ss_pred             hCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence            688999999999995 999999999999999999987554432          478999988764

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.30  E-value=4.1e-12  Score=76.79  Aligned_cols=55  Identities=29%  Similarity=0.288  Sum_probs=43.8

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh-hcc--ceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDA--IAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~-~~~--~~~~~~~~~l   55 (75)
                      ++|++|++|+||||+.+|+++|+++||++|++.++....... ..+  +++++++.++
T Consensus       115 ~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el  172 (181)
T PRK08942        115 RLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL  172 (181)
T ss_pred             HcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence            368899999999999999999999999999998876532222 234  7788887665

>PRK06769 hypothetical protein; Validated

Probab=99.29  E-value=1.7e-12  Score=78.41  Aligned_cols=55  Identities=15%  Similarity=0.317  Sum_probs=43.0

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch------hhh--hccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE------QDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~------~~~--~~~~~~~~~~~~l   55 (75)
                      +++++|++|+||||+.+|+++|++|||++|++.++....      ..+  ..++++++++.++
T Consensus       105 ~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el  167 (173)
T PRK06769        105 KHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA  167 (173)
T ss_pred             HcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence            368899999999999999999999999999999876431      111  2456677776655

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.29  E-value=2e-12  Score=80.06  Aligned_cols=56  Identities=23%  Similarity=0.380  Sum_probs=46.3

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh-hhhccceeeCCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-DFKDAIAIYPDLSNVR   56 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~   56 (75)
                      ++|++|++|+|||||.+|+++|++|||++|++.++....+ ....++.++.++.++.
T Consensus       160 ~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~  216 (222)
T PRK10826        160 KLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELT  216 (222)
T ss_pred             HcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence            3689999999999999999999999999999988764432 2345788888888774

>PLN02940 riboflavin kinase

Probab=99.29  E-value=5.9e-12  Score=84.03  Aligned_cols=59  Identities=25%  Similarity=0.444  Sum_probs=49.1

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD   59 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~   59 (75)
                      +++++|++|+|||||..|+++|++|||++|++.++.........++.+++++.++....
T Consensus       162 ~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~  220 (382)
T PLN02940        162 RLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEK  220 (382)
T ss_pred             HcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHH
Confidence            36899999999999999999999999999999987644334456788999998886443

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.26  E-value=5.8e-12  Score=77.64  Aligned_cols=55  Identities=16%  Similarity=0.265  Sum_probs=44.2

Q ss_pred             CCCCC-CCcEEEEecCHHhHHHHHHcCCeE-EEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            1 RLGIS-EKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~-p~~~l~igDs~~di~aA~~AG~~~-i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      ++++. |++|+||||+.+|+++|+++||++ |++.++......+  ..++++++++.++
T Consensus       157 ~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l  215 (220)
T TIGR03351       157 LTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL  215 (220)
T ss_pred             HcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence            36776 799999999999999999999999 8998876544333  3567788887665

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.25  E-value=9.2e-12  Score=76.64  Aligned_cols=55  Identities=18%  Similarity=0.299  Sum_probs=43.7

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchh---hhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQ---DFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~---~~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+|||||. +|+++|+++||++|++.++.....   ....++++++++.++
T Consensus       162 ~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el  220 (221)
T TIGR02253       162 RLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL  220 (221)
T ss_pred             HcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence            3689999999999998 899999999999999988764321   123467788887654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.24  E-value=2.9e-12  Score=79.13  Aligned_cols=55  Identities=20%  Similarity=0.406  Sum_probs=39.2

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +++++|++|+|||||..|+++|++|||++|++..+.........++.+++++.++
T Consensus       154 ~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l  208 (221)
T PRK10563        154 AMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQL  208 (221)
T ss_pred             HcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHH
Confidence            3688999999999999999999999999998865432211112233345555444

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.21  E-value=1.9e-11  Score=75.30  Aligned_cols=54  Identities=22%  Similarity=0.278  Sum_probs=45.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhh--hhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD--FKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~--~~~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+.+|+++|+++|+++|++.++......  ...++++++++.++
T Consensus       162 ~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l  217 (226)
T PRK13222        162 LGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAEL  217 (226)
T ss_pred             cCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHH
Confidence            6788999999999999999999999999999988653322  24678899988777

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.21  E-value=2.7e-11  Score=82.23  Aligned_cols=52  Identities=21%  Similarity=0.264  Sum_probs=43.4

Q ss_pred             CCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            4 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|++|+|||||.+|+++|++|||++|++.++......+..++++++++.++
T Consensus       398 l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el  449 (459)
T PRK06698        398 YDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL  449 (459)
T ss_pred             cCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence            4689999999999999999999999999998765443445678888887665

>PLN02645 phosphoglycolate phosphatase

Probab=99.20  E-value=2.2e-11  Score=79.30  Aligned_cols=55  Identities=15%  Similarity=0.248  Sum_probs=45.9

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh------hccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF------KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~------~~~~~~~~~~~~l   55 (75)
                      ++++++++|+||||+. +||++|+++||++|+|.+|......+      ..++++++++.++
T Consensus       242 ~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l  303 (311)
T PLN02645        242 KFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF  303 (311)
T ss_pred             HcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence            3688999999999997 99999999999999999988655433      2478888887665

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.20  E-value=1.6e-11  Score=78.59  Aligned_cols=55  Identities=24%  Similarity=0.320  Sum_probs=46.1

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+||||+.+|+++|+++||++++|.+++.....+  ..++++++++.++
T Consensus       169 ~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el  225 (272)
T PRK13223        169 MAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRAL  225 (272)
T ss_pred             HhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHH
Confidence            368899999999999999999999999999999886543332  3678888888776

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.20  E-value=1.4e-11  Score=75.74  Aligned_cols=54  Identities=15%  Similarity=0.209  Sum_probs=42.6

Q ss_pred             C-CCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 L-GISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l-~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      + +++|++|+|||||. +|+++|+++||++|++.++.........++++++++.++
T Consensus       165 ~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el  220 (224)
T TIGR02254       165 MPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL  220 (224)
T ss_pred             hcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence            5 88999999999998 799999999999999987643322223466778877665

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK10444 UMP phosphatase; Provisional

Probab=99.19  E-value=3e-11  Score=76.72  Aligned_cols=54  Identities=17%  Similarity=0.406  Sum_probs=46.4

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+. +|+++|+++|+++++|.+|....+.+    ..++++++++.++
T Consensus       187 ~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el  245 (248)
T PRK10444        187 MQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI  245 (248)
T ss_pred             cCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence            578999999999996 89999999999999999998765444    3578899988776

>PRK09449 dUMP phosphatase; Provisional

Probab=99.16  E-value=3.7e-11  Score=74.21  Aligned_cols=55  Identities=15%  Similarity=0.197  Sum_probs=40.2

Q ss_pred             CCCCC-CCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            1 RLGIS-EKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~-p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|+. +++|+|||||. +|+++|++|||++|++.++.........++++++++.++
T Consensus       162 ~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el  218 (224)
T PRK09449        162 QMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL  218 (224)
T ss_pred             HcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence            36765 47999999998 799999999999999974322111112467788887665

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.16  E-value=8e-11  Score=86.48  Aligned_cols=61  Identities=33%  Similarity=0.592  Sum_probs=51.4

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCCCHHHHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~   62 (75)
                      +++++|++|+||||+..|+++|++|||++|++.++... ..+  ..++++++++.++++..+..
T Consensus       230 ~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~-~~L~~~~a~~vi~~l~el~~~~~~~  292 (1057)
T PLN02919        230 ILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSE-EILKDAGPSLIRKDIGNISLSDILT  292 (1057)
T ss_pred             HcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCH-HHHhhCCCCEEECChHHCCHHHHHh
Confidence            47899999999999999999999999999999987643 333  46788999999998776543

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.14  E-value=9.6e-11  Score=74.21  Aligned_cols=54  Identities=20%  Similarity=0.353  Sum_probs=44.9

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+. +|+.+|+++||++++|.+|.......    ..++++++++.++
T Consensus       191 ~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~  249 (249)
T TIGR01457       191 LGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW  249 (249)
T ss_pred             cCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence            678999999999996 89999999999999999987654433    2478888887654

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.12  E-value=9.2e-11  Score=74.63  Aligned_cols=55  Identities=15%  Similarity=0.157  Sum_probs=44.5

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhh----hhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQD----FKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~----~~~~~~~~~~~~~l   55 (75)
                      +++++|++|+||||+. +|+++|+++||++|+|.+|......    ...++++++++.++
T Consensus       191 ~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el  250 (257)
T TIGR01458       191 ATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA  250 (257)
T ss_pred             HhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence            3678999999999996 9999999999999999988533221    13578888888776

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.10  E-value=9.3e-11  Score=73.19  Aligned_cols=38  Identities=24%  Similarity=0.399  Sum_probs=33.1

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCe-EEEEcCCCCc
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMA-CVITYTSSTA   38 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~-~i~v~~~~~~   38 (75)
                      ++|++|++|+|||||..|+++|++|||+ +++|.++...
T Consensus       161 ~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~  199 (224)
T PRK14988        161 HTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSG  199 (224)
T ss_pred             HcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCC
Confidence            4789999999999999999999999998 4778876543

>PHA02597 30

Probab=99.08  E-value=5.4e-11  Score=72.39  Aligned_cols=48  Identities=13%  Similarity=0.170  Sum_probs=38.9

Q ss_pred             CCcEEEEecCHHhHHHHHHc--CCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRA--GMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~A--G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      |++|+|||||..|+++|++|  ||++|++.|+..  .....+++.+.++.++
T Consensus       145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~  194 (197)
T PHA02597        145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDI  194 (197)
T ss_pred             CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHH
Confidence            78899999999999999999  999999998864  2333455777776655

2 hypothetical protein; Provisional

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.08  E-value=1.2e-10  Score=73.10  Aligned_cols=55  Identities=16%  Similarity=0.154  Sum_probs=40.7

Q ss_pred             CCCCCCCcEEEEecC-HHhHHHHHHcCCeEEEEcCCCCch----hhhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAE----QDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs-~~di~aA~~AG~~~i~v~~~~~~~----~~~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+||||+ ..|+++|+++||++|++..+....    .....++..+.++.++
T Consensus       175 ~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el  234 (238)
T PRK10748        175 KLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL  234 (238)
T ss_pred             HcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence            368899999999999 599999999999999997654321    1112356666666554

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.07  E-value=1.4e-10  Score=68.23  Aligned_cols=35  Identities=43%  Similarity=0.603  Sum_probs=32.1

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      +++++|++|+||||+..|+++|+++||++|+|..+
T Consensus       113 ~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       113 RLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence            36889999999999999999999999999998754

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.07  E-value=2.9e-10  Score=71.44  Aligned_cols=57  Identities=37%  Similarity=0.476  Sum_probs=45.6

Q ss_pred             CCCCCC-CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCH
Q 048682            1 RLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL   57 (75)
Q Consensus         1 ~l~~~p-~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~   57 (75)
                      +||..| +.|++||||+.|++||++|||++|++++..........++.+++++.++.+
T Consensus       163 ~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~  220 (222)
T KOG2914|consen  163 RLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFKP  220 (222)
T ss_pred             hcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccCc
Confidence            367777 999999999999999999999999999844333233567788888877754

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.05  E-value=3.5e-10  Score=70.90  Aligned_cols=54  Identities=24%  Similarity=0.332  Sum_probs=39.8

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch-hhh-hccceeeCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE-QDF-KDAIAIYPDLSN   54 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~-~~~-~~~~~~~~~~~~   54 (75)
                      ++|++|++|+||||+..|+++|++|||++|++.++.... ... ......+.+|.+
T Consensus       164 ~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~  219 (220)
T TIGR01691       164 QLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNA  219 (220)
T ss_pred             HhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCccc
Confidence            368999999999999999999999999999987665321 111 111445666654

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.02  E-value=2.2e-10  Score=68.64  Aligned_cols=33  Identities=36%  Similarity=0.576  Sum_probs=30.5

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEc
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITY   33 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~   33 (75)
                      +++++|++|+||||+.+|+++|+++||++|+|.
T Consensus       153 ~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       153 GLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             HcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence            368899999999999999999999999999873

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=98.99  E-value=3.4e-10  Score=68.16  Aligned_cols=33  Identities=39%  Similarity=0.634  Sum_probs=30.8

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEc
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITY   33 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~   33 (75)
                      +++++|++|||||||.+|+++|++||+++|++.
T Consensus       154 ~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        154 LMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             HcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence            468899999999999999999999999999985

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=98.97  E-value=5.9e-10  Score=67.14  Aligned_cols=39  Identities=15%  Similarity=0.336  Sum_probs=34.6

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCch
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAE   39 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~   39 (75)
                      +++++|++|+||||+. .|+++|+++||++|+|.++....
T Consensus       103 ~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~  142 (170)
T TIGR01668       103 EMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPD  142 (170)
T ss_pred             HcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCc
Confidence            3678999999999998 79999999999999999887543

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.96  E-value=5.7e-10  Score=67.85  Aligned_cols=35  Identities=9%  Similarity=0.081  Sum_probs=32.9

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCC
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSST   37 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~   37 (75)
                      +++|++|+|||||+.|+++|++||+++|++.++..
T Consensus       127 gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~  161 (174)
T TIGR01685       127 VLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMD  161 (174)
T ss_pred             CCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCcc
Confidence            68999999999999999999999999999988764

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=98.96  E-value=8e-10  Score=67.53  Aligned_cols=38  Identities=21%  Similarity=0.370  Sum_probs=34.2

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA   38 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~   38 (75)
                      ++|++|++|+||||+..|+++|+++||++|++.++...
T Consensus       153 ~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~  190 (199)
T PRK09456        153 AEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTI  190 (199)
T ss_pred             HcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccH
Confidence            47899999999999999999999999999999876543

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=98.96  E-value=8.9e-10  Score=67.02  Aligned_cols=35  Identities=20%  Similarity=0.320  Sum_probs=32.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +|++|++|++|||+.+|+++|+++||++|++..+.
T Consensus       161 ~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       161 LGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             hCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence            68899999999999999999999999999997643

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=98.90  E-value=1.3e-09  Score=65.68  Aligned_cols=32  Identities=25%  Similarity=0.448  Sum_probs=29.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEE
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVIT   32 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v   32 (75)
                      ++|++|++|+||||+..|+++|+++||++|+|
T Consensus       153 ~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       153 EAGVDPERAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             HhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            36899999999999999999999999999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.90  E-value=2.3e-09  Score=66.04  Aligned_cols=55  Identities=20%  Similarity=0.283  Sum_probs=41.0

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCch-hhhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAE-QDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~-~~~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+||||+. +|+.+|+++||++|++..+.... .....+++.+.++.++
T Consensus       166 ~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l  222 (229)
T COG1011         166 KLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL  222 (229)
T ss_pred             HcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence            4789999999999996 77799999999999997655321 1113456666766555

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=98.90  E-value=1.1e-09  Score=65.61  Aligned_cols=32  Identities=47%  Similarity=0.761  Sum_probs=29.6

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEE
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVIT   32 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v   32 (75)
                      +++++|++|+|||||..|+++|+++||++|+|
T Consensus       154 ~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       154 LLGVSPNECVVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             HcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence            36889999999999999999999999999975

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.88  E-value=2.2e-09  Score=63.93  Aligned_cols=32  Identities=44%  Similarity=0.825  Sum_probs=29.6

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEE
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVIT   32 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v   32 (75)
                      +++++|++|+||||+..|+++|+++||++|+|
T Consensus       152 ~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       152 KLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             HcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence            36889999999999999999999999999975

HAD subfamilies caused by an overly broad single model.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.88  E-value=1.9e-09  Score=64.70  Aligned_cols=36  Identities=17%  Similarity=0.124  Sum_probs=33.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST   37 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~   37 (75)
                      ++++|++|+||||+.+|+++|+++||+++++.++..
T Consensus       116 ~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~  151 (161)
T TIGR01261       116 NLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEEL  151 (161)
T ss_pred             cCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhc
Confidence            578999999999999999999999999999987654

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=98.87  E-value=2e-09  Score=63.06  Aligned_cols=31  Identities=35%  Similarity=0.518  Sum_probs=29.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVIT   32 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v   32 (75)
                      ++++|++|++|||+..|+++|+++||++|+|
T Consensus       146 ~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  146 LGIPPEEILFVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             HTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             cCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence            5789999999999999999999999999986

...

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=98.85  E-value=2e-09  Score=65.99  Aligned_cols=36  Identities=22%  Similarity=0.505  Sum_probs=32.8

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      ++|++|++|+||||+..|+++|+++||++|++.++.
T Consensus       164 ~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~  199 (211)
T TIGR02247       164 RLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDEE  199 (211)
T ss_pred             HcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence            468999999999999999999999999999997643

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.75  E-value=8.7e-09  Score=59.22  Aligned_cols=32  Identities=34%  Similarity=0.547  Sum_probs=29.6

Q ss_pred             C-CCCCCcEEEEec-CHHhHHHHHHcCCeEEEEc
Q 048682            2 L-GISEKDCLVVED-SVIGLQAATRAGMACVITY   33 (75)
Q Consensus         2 l-~~~p~~~l~igD-s~~di~aA~~AG~~~i~v~   33 (75)
                      + +++|++|+|||| +..|+++|+++|+++|++.
T Consensus        98 ~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        98 FNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             cCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            5 489999999999 7999999999999999875

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=98.75  E-value=5.6e-09  Score=63.66  Aligned_cols=31  Identities=35%  Similarity=0.515  Sum_probs=28.3

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEE
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVI   31 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~   31 (75)
                      ++|++|++|+||||+. +|+++|+++||++|+
T Consensus       172 ~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       172 RAGISPEEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             HcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence            3689999999999997 899999999999874

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.73  E-value=1.2e-08  Score=65.63  Aligned_cols=34  Identities=18%  Similarity=0.121  Sum_probs=30.8

Q ss_pred             CC-CCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            3 GI-SEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         3 ~~-~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +. +|++|+||||+.+|+++|+++||++|+|.||.
T Consensus       265 ~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~  299 (300)
T PHA02530        265 IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD  299 (300)
T ss_pred             hccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence            45 57999999999999999999999999998873

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=98.64  E-value=3.8e-08  Score=64.43  Aligned_cols=51  Identities=16%  Similarity=0.067  Sum_probs=40.3

Q ss_pred             CCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh---hccceeeCCCCCC
Q 048682            5 SEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF---KDAIAIYPDLSNV   55 (75)
Q Consensus         5 ~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~---~~~~~~~~~~~~l   55 (75)
                      ++++++||||++ +||.+|+++||.+|+|.+|.....+.   ..++++++++.++
T Consensus       262 ~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv~~l~e~  316 (321)
T TIGR01456       262 PFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIVNDVFDA  316 (321)
T ss_pred             ChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEECCHHHH
Confidence            457999999997 99999999999999999874332221   2468888888665

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=98.63  E-value=2.8e-08  Score=64.08  Aligned_cols=54  Identities=20%  Similarity=0.428  Sum_probs=43.3

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l   55 (75)
                      ++.++++|+||||+. +||++|+++||.++.|.+|.+...+.    ..++++++++.++
T Consensus       203 ~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~  261 (269)
T COG0647         203 LGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL  261 (269)
T ss_pred             hCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence            577889999999996 89999999999999999998755443    2356666666555

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.63  E-value=1.1e-08  Score=63.35  Aligned_cols=59  Identities=19%  Similarity=0.241  Sum_probs=38.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch-hhhhccceeeCCCCCCCHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE-QDFKDAIAIYPDLSNVRLKDLELL   63 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~   63 (75)
                      ++..+++|+|||||.+|+.+|++||+..+  ....... .....+...+++|.++ .+.|+++
T Consensus       156 ~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f~ei-~~~l~~~  215 (219)
T PRK09552        156 LSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETFHDV-QTELKHL  215 (219)
T ss_pred             hccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCHHHH-HHHHHHH
Confidence            46778999999999999999999999333  2211111 1122355667777777 4555443

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.62  E-value=8.7e-08  Score=56.87  Aligned_cols=50  Identities=12%  Similarity=0.152  Sum_probs=39.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +++++++|+|||||.+|+.+++++|+. +++.+...  .....+++++.+...
T Consensus        88 ~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~--~~~~~a~~i~~~~~~  137 (154)
T TIGR01670        88 LALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHP--LLIPRADYVTRIAGG  137 (154)
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCH--HHHHhCCEEecCCCC
Confidence            678999999999999999999999997 77766542  223457788877653

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.60  E-value=4.6e-08  Score=61.55  Aligned_cols=34  Identities=21%  Similarity=0.344  Sum_probs=30.4

Q ss_pred             CCCCCCcE-EEEecCH-HhHHHHHHcCCeEEEEcCC
Q 048682            2 LGISEKDC-LVVEDSV-IGLQAATRAGMACVITYTS   35 (75)
Q Consensus         2 l~~~p~~~-l~igDs~-~di~aA~~AG~~~i~v~~~   35 (75)
                      ++++++++ +||||+. +||++|+++|+++|+|.+|
T Consensus       201 ~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       201 LQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             hCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            56778887 9999998 8999999999999999764

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=98.58  E-value=7.9e-08  Score=64.02  Aligned_cols=34  Identities=18%  Similarity=0.159  Sum_probs=31.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      ++++|++|+||||+.+|+++|+++||++|++...
T Consensus       117 l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~  150 (354)
T PRK05446        117 GAIDLANSYVIGDRETDVQLAENMGIKGIRYARE  150 (354)
T ss_pred             cCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence            5788999999999999999999999999999543

>PLN02954 phosphoserine phosphatase

Probab=98.57  E-value=9.3e-08  Score=59.04  Aligned_cols=50  Identities=18%  Similarity=0.224  Sum_probs=36.5

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh-hhhccceeeCCCCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-DFKDAIAIYPDLSNV   55 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l   55 (75)
                      .++|+|||||.+|+++|+++|+.+++..++..... ....++++++++.++
T Consensus       169 ~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el  219 (224)
T PLN02954        169 YKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL  219 (224)
T ss_pred             CCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence            46899999999999999999988765544332222 224578888887665

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=98.55  E-value=4e-08  Score=59.39  Aligned_cols=34  Identities=18%  Similarity=0.435  Sum_probs=31.1

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcC
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYT   34 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~   34 (75)
                      +|+++|++|+||||.. +|+.+|+.+||+||.|..
T Consensus       105 ~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179         105 EMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             HcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence            4789999999999996 899999999999999853

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.53  E-value=5e-08  Score=59.47  Aligned_cols=60  Identities=8%  Similarity=-0.081  Sum_probs=39.6

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccce-eeCCCCCCCHHHHHHHHHH
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA-IYPDLSNVRLKDLELLLQN   66 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~~~~   66 (75)
                      +..+++|+|||||.+|++++++||+.+. +.  .........+++ +++++.++ ++.+....++
T Consensus       141 ~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~--~~~~~~~~~~~~~~~~~~~el-~~~l~~~~~~  201 (205)
T PRK13582        141 KSLGYRVIAAGDSYNDTTMLGEADAGIL-FR--PPANVIAEFPQFPAVHTYDEL-LAAIDKASAR  201 (205)
T ss_pred             HHhCCeEEEEeCCHHHHHHHHhCCCCEE-EC--CCHHHHHhCCcccccCCHHHH-HHHHHHHHhh
Confidence            3456899999999999999999998543 32  221111123343 78888877 5666655543

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.50  E-value=1.7e-07  Score=59.49  Aligned_cols=31  Identities=19%  Similarity=0.147  Sum_probs=28.7

Q ss_pred             cEEEEecCHHhHHHHHHcCCeEEEEcCCCCc
Q 048682            8 DCLVVEDSVIGLQAATRAGMACVITYTSSTA   38 (75)
Q Consensus         8 ~~l~igDs~~di~aA~~AG~~~i~v~~~~~~   38 (75)
                      -|+||||+.+|+++|++||+++|++.|++..
T Consensus       186 i~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~  216 (237)
T PRK11009        186 IRIFYGDSDNDITAAREAGARGIRILRAANS  216 (237)
T ss_pred             CeEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence            4999999999999999999999999998764

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.50  E-value=1.7e-07  Score=59.42  Aligned_cols=30  Identities=23%  Similarity=0.186  Sum_probs=28.1

Q ss_pred             EEEEecCHHhHHHHHHcCCeEEEEcCCCCc
Q 048682            9 CLVVEDSVIGLQAATRAGMACVITYTSSTA   38 (75)
Q Consensus         9 ~l~igDs~~di~aA~~AG~~~i~v~~~~~~   38 (75)
                      |+||||+.+|+.+|++||+++|++.|++..
T Consensus       187 ~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s  216 (237)
T TIGR01672       187 RIHYGDSDNDITAAKEAGARGIRILRASNS  216 (237)
T ss_pred             eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence            899999999999999999999999988754

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.49  E-value=2e-07  Score=58.65  Aligned_cols=33  Identities=24%  Similarity=0.309  Sum_probs=28.3

Q ss_pred             CCCC-CCcEEEEecC-HHhHHHHHHcCCeEEEEcC
Q 048682            2 LGIS-EKDCLVVEDS-VIGLQAATRAGMACVITYT   34 (75)
Q Consensus         2 l~~~-p~~~l~igDs-~~di~aA~~AG~~~i~v~~   34 (75)
                      ++.. +++|+||||+ .+|+++|+++||++++|.+
T Consensus       208 ~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t  242 (242)
T TIGR01459       208 CSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT  242 (242)
T ss_pred             cCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence            4554 5789999999 6999999999999999853

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.47  E-value=3.9e-07  Score=55.44  Aligned_cols=46  Identities=13%  Similarity=0.169  Sum_probs=34.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP   50 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~   50 (75)
                      +|++|++|+||||+.+|+.+++++|+.+ ++.+.  .......++++++
T Consensus       108 ~gl~~~ev~~VGDs~~D~~~a~~aG~~~-~v~~~--~~~~~~~a~~v~~  153 (183)
T PRK09484        108 LAIAPEQVAYIGDDLIDWPVMEKVGLSV-AVADA--HPLLLPRADYVTR  153 (183)
T ss_pred             hCCCHHHEEEECCCHHHHHHHHHCCCeE-ecCCh--hHHHHHhCCEEec
Confidence            6889999999999999999999999984 45321  1111245677775

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.46  E-value=2.5e-07  Score=56.94  Aligned_cols=47  Identities=19%  Similarity=0.147  Sum_probs=34.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL   52 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~   52 (75)
                      ++++|++|+|||||.+|+++|++||+.++ +. +.  ......+++++.+.
T Consensus       164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i~-~~-~~--~~~~~~a~~~i~~~  210 (219)
T TIGR00338       164 EGISPENTVAVGDGANDLSMIKAAGLGIA-FN-AK--PKLQQKADICINKK  210 (219)
T ss_pred             cCCCHHHEEEEECCHHHHHHHHhCCCeEE-eC-CC--HHHHHhchhccCCC
Confidence            57889999999999999999999999853 32 21  11224566766644

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.43  E-value=1.1e-07  Score=57.18  Aligned_cols=28  Identities=18%  Similarity=0.246  Sum_probs=25.6

Q ss_pred             CCCCcEEEEecCH--------HhHHHHHHcCCeEEE
Q 048682            4 ISEKDCLVVEDSV--------IGLQAATRAGMACVI   31 (75)
Q Consensus         4 ~~p~~~l~igDs~--------~di~aA~~AG~~~i~   31 (75)
                      ++|++|+||||+.        +|+++|++||+++++
T Consensus       125 ~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       125 IKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             CCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            8899999999996        699999999999863

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.41  E-value=2e-07  Score=59.21  Aligned_cols=37  Identities=24%  Similarity=0.474  Sum_probs=32.8

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCC
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSST   37 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~   37 (75)
                      ++++.|++|++|||+. +|+++|+++||.++.|.....
T Consensus       180 ~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~  217 (237)
T KOG3085|consen  180 RLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSIT  217 (237)
T ss_pred             HhCCChHHeEEecCccccccHhHHHcCCEEEEEccccc
Confidence            4689999999999996 899999999999999876544

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.38  E-value=3.1e-07  Score=55.55  Aligned_cols=35  Identities=20%  Similarity=0.118  Sum_probs=30.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +++++++|+|||||.+|+++|+.||+.++..+.+.
T Consensus       159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       159 LNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             hCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence            57789999999999999999999999877655443

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=98.31  E-value=5.8e-07  Score=52.56  Aligned_cols=25  Identities=32%  Similarity=0.555  Sum_probs=23.0

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAG   26 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG   26 (75)
                      +++++| +|+|||||..|+++|++||
T Consensus       130 ~~~~~~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       130 SLGLPP-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             HcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence            368888 9999999999999999997

HAD subfamilies caused by an overly broad single model.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.30  E-value=4.1e-07  Score=59.31  Aligned_cols=41  Identities=15%  Similarity=0.300  Sum_probs=35.7

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhh
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQD   41 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~   41 (75)
                      +++++|++|+||||+. +||.-|++.|++++++.+|-+..++
T Consensus       236 ~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led  277 (306)
T KOG2882|consen  236 KFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLED  277 (306)
T ss_pred             HcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHH
Confidence            3578999999999996 8999999999999999988765443

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.28  E-value=9e-07  Score=55.92  Aligned_cols=52  Identities=17%  Similarity=0.131  Sum_probs=37.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|+++++|++|||+.+|+.+++.||+. |++.++  .......++++.++-.+=
T Consensus       210 ~~gi~~~e~i~~GD~~NDi~m~~~ag~~-vamgna--~~~lk~~Ad~v~~~n~~d  261 (272)
T PRK10530        210 AQGWSMKNVVAFGDNFNDISMLEAAGLG-VAMGNA--DDAVKARADLVIGDNTTP  261 (272)
T ss_pred             HcCCCHHHeEEeCCChhhHHHHHhcCce-EEecCc--hHHHHHhCCEEEecCCCC
Confidence            3689999999999999999999999973 334332  222234678887766553

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=98.25  E-value=3.7e-07  Score=53.81  Aligned_cols=30  Identities=13%  Similarity=0.127  Sum_probs=26.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEE
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACV   30 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i   30 (75)
                      +++++|++|||||||..|+++|+++|+..-
T Consensus       110 ~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~  139 (148)
T smart00577      110 LLGRDLSNVIIIDDSPDSWPFHPENLIPIK  139 (148)
T ss_pred             HcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence            368899999999999999999999998754

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=98.19  E-value=1.2e-06  Score=53.43  Aligned_cols=24  Identities=25%  Similarity=0.387  Sum_probs=22.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRA   25 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~A   25 (75)
                      +|++|++|+||||+.+|+++|++|
T Consensus       174 ~~~~~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       174 LGVEACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             hCcCcccEEEEeCCHHHHHHHHhC
Confidence            688999999999999999999986

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=98.17  E-value=4.3e-06  Score=55.15  Aligned_cols=46  Identities=13%  Similarity=0.123  Sum_probs=34.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP   50 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~   50 (75)
                      ++|+++++|++|||+.+|+.+++.||+.+++  +..  ..-...++..++
T Consensus       259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAk--p~Vk~~Ad~~i~  304 (322)
T PRK11133        259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAK--PKVNEQAQVTIR  304 (322)
T ss_pred             HcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCC--HHHHhhCCEEec
Confidence            3689999999999999999999999997664  222  112245677775

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=98.15  E-value=1.5e-06  Score=52.60  Aligned_cols=50  Identities=18%  Similarity=0.274  Sum_probs=35.5

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS   53 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~   53 (75)
                      ++++++++|++|||+.+|+.+++.+|+..+.- +..  ..-...++++..+-.
T Consensus        93 ~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~--~~lk~~A~~I~~~~~  142 (169)
T TIGR02726        93 EMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAV--ADVKEAAAYVTTARG  142 (169)
T ss_pred             HcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-Cch--HHHHHhCCEEcCCCC
Confidence            36889999999999999999999999986633 222  112244566655433

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.10  E-value=3.2e-06  Score=47.25  Aligned_cols=31  Identities=32%  Similarity=0.457  Sum_probs=27.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVIT   32 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v   32 (75)
                      ++.+++++++|||+.+|+++++++|+++++|
T Consensus       109 ~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         109 LGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             cCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            4566899999999999999999999999874

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=98.09  E-value=9.9e-07  Score=54.56  Aligned_cols=25  Identities=24%  Similarity=0.369  Sum_probs=22.7

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCC
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGM   27 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~   27 (75)
                      +..+++|+||||+.+|+.+|+.||+
T Consensus       153 ~~~~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       153 SEPNDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             hhcCCcEEEEeCCHHHHHHHHhCCe
Confidence            3467889999999999999999998

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.07  E-value=1.9e-06  Score=54.19  Aligned_cols=54  Identities=15%  Similarity=0.252  Sum_probs=41.2

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l   55 (75)
                      +|++|++|+||||-. .|+-.|.+.||+.|.|.+|.....+.    ..++...++|.+-
T Consensus       194 ~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~A  252 (262)
T KOG3040|consen  194 LGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADA  252 (262)
T ss_pred             cCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHH
Confidence            588999999999986 69999999999999999887543211    2455566666443

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=98.04  E-value=1.8e-06  Score=51.44  Aligned_cols=25  Identities=20%  Similarity=0.290  Sum_probs=22.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHc
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRA   25 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~A   25 (75)
                      ++|++|++|+||||+..|+++|+++
T Consensus       151 ~~~~~p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       151 TVGLPPDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             HHCCCHHHeEeEecChhhHHHHhcC
Confidence            3689999999999999999999875

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=97.91  E-value=1.4e-05  Score=49.00  Aligned_cols=54  Identities=28%  Similarity=0.308  Sum_probs=38.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh-hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~-~~~~~~~~~~~~l   55 (75)
                      +++++++.+||||+.+|+++|.++|++.+.+.++....... ...+..++++.++
T Consensus       118 ~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (181)
T COG0241         118 YNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEF  172 (181)
T ss_pred             hCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHH
Confidence            46889999999999999999999999988776655332111 1234455555444

>TIGR00685 T6PP trehalose-phosphatase

Probab=97.85  E-value=2.6e-05  Score=49.21  Aligned_cols=55  Identities=18%  Similarity=-0.033  Sum_probs=41.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHc-------CCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRA-------GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE   61 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~A-------G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   61 (75)
                      ++..+.+++||||+.+|+.+.+.+       |..+|.+.++.    ....++++++++.++ ...|.
T Consensus       179 ~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~----~~~~A~~~~~~~~~v-~~~L~  240 (244)
T TIGR00685       179 QPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS----KKTVAKFHLTGPQQV-LEFLG  240 (244)
T ss_pred             cccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC----cCCCceEeCCCHHHH-HHHHH
Confidence            466788999999999999999999       77778776442    123477888887775 44443

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=97.83  E-value=1.4e-05  Score=48.50  Aligned_cols=25  Identities=28%  Similarity=0.327  Sum_probs=23.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAG   26 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG   26 (75)
                      |++++++|+||||+.+|+.|+++||
T Consensus       191 l~~~~~~v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  191 LQVKPGEVAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             HTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred             HhcCCCEEEEEccCHHHHHHHHhCc
Confidence            5678899999999999999999997

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.81  E-value=3e-05  Score=47.92  Aligned_cols=50  Identities=16%  Similarity=0.147  Sum_probs=36.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++++++++|||+.+|+.+.+.+|+.++ +.+...  .-...++++..+..+
T Consensus       169 ~~i~~~~~i~~GD~~NDi~m~~~ag~~va-m~Na~~--~vk~~a~~v~~~n~~  218 (230)
T PRK01158        169 MGIDPEEVAAIGDSENDLEMFEVAGFGVA-VANADE--ELKEAADYVTEKSYG  218 (230)
T ss_pred             hCCCHHHEEEECCchhhHHHHHhcCceEE-ecCccH--HHHHhcceEecCCCc
Confidence            68899999999999999999999998754 444321  122456777665544

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.77  E-value=6e-05  Score=48.15  Aligned_cols=31  Identities=19%  Similarity=0.233  Sum_probs=27.8

Q ss_pred             CCCCC-CcEEEEecCHHhHHHHHHcCCeEEEE
Q 048682            2 LGISE-KDCLVVEDSVIGLQAATRAGMACVIT   32 (75)
Q Consensus         2 l~~~p-~~~l~igDs~~di~aA~~AG~~~i~v   32 (75)
                      +|+++ +++++|||+.+|+.+.+.+|+.+++-
T Consensus       202 ~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~  233 (273)
T PRK00192        202 YRRQDGVETIALGDSPNDLPMLEAADIAVVVP  233 (273)
T ss_pred             HhccCCceEEEEcCChhhHHHHHhCCeeEEeC
Confidence            57899 99999999999999999999876643

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.76  E-value=2.2e-05  Score=48.32  Aligned_cols=50  Identities=18%  Similarity=0.094  Sum_probs=36.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++++++++|||+.+|+.+.+.+|..+ ++.+..  ..-...++++..+..+
T Consensus       161 ~~i~~~~~i~~GD~~NDi~m~~~ag~~v-am~Na~--~~~k~~A~~vt~~~~~  210 (225)
T TIGR01482       161 LGIKPGETLVCGDSENDIDLFEVPGFGV-AVANAQ--PELKEWADYVTESPYG  210 (225)
T ss_pred             hCCCHHHEEEECCCHhhHHHHHhcCceE-EcCChh--HHHHHhcCeecCCCCC
Confidence            6889999999999999999999999964 454432  1222456666655443

catalyze the same reaction as SPP.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.76  E-value=4.6e-05  Score=48.04  Aligned_cols=35  Identities=20%  Similarity=0.196  Sum_probs=31.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +++++++|++|||+.+|+.+.+.++..+|++.+..
T Consensus       179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~  213 (249)
T TIGR01485       179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ  213 (249)
T ss_pred             cCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence            68899999999999999999999888888887654

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=97.75  E-value=5.4e-05  Score=52.90  Aligned_cols=45  Identities=13%  Similarity=0.033  Sum_probs=33.1

Q ss_pred             CCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCC
Q 048682            4 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD   51 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~   51 (75)
                      ..+++|+||||+.+|+.++++||   +++.++.........++.++.+
T Consensus       445 ~~~~~v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~~  489 (556)
T TIGR01525       445 EEGGVVAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLLN  489 (556)
T ss_pred             HcCCEEEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEeC
Confidence            35678999999999999999999   5666664332233567887764

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=97.69  E-value=4.3e-05  Score=53.21  Aligned_cols=49  Identities=16%  Similarity=0.112  Sum_probs=35.9

Q ss_pred             CCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC-Cchhhhhccceee--CCCCCC
Q 048682            4 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSS-TAEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~-~~~~~~~~~~~~~--~~~~~l   55 (75)
                      ...++++||||+.+|+.++++||+   ++.+++ ........++.++  +++.++
T Consensus       423 ~~~~~v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~l  474 (536)
T TIGR01512       423 EKYGPVAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSRL  474 (536)
T ss_pred             hcCCEEEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence            345789999999999999999995   565663 2222334677777  777776

.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.68  E-value=5.6e-05  Score=46.65  Aligned_cols=30  Identities=20%  Similarity=0.107  Sum_probs=26.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEE
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACV   30 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i   30 (75)
                      ++|+++++|++|||+.+|+.+-+.||..++
T Consensus       190 ~lgi~~~~vi~~GD~~NDi~ml~~ag~~va  219 (221)
T TIGR02463       190 TYNQPDVKTLGLGDGPNDLPLLEVADYAVV  219 (221)
T ss_pred             HhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence            368999999999999999999999997653

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.68  E-value=7.2e-05  Score=47.15  Aligned_cols=50  Identities=20%  Similarity=0.182  Sum_probs=36.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +++++++|++|||+.+|+.+.+.+|+.+++ .+.  .......++++..+..+
T Consensus       200 ~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na--~~~~k~~a~~~~~~n~~  249 (256)
T TIGR00099       200 LGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNA--DEELKALADYVTDSNNE  249 (256)
T ss_pred             cCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCc--hHHHHHhCCEEecCCCC
Confidence            688999999999999999999999987543 332  22222456777665443

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.67  E-value=6.5e-05  Score=46.28  Aligned_cols=49  Identities=16%  Similarity=0.131  Sum_probs=35.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS   53 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~   53 (75)
                      ++++++++++||||.+|+.+.+.+|+.+. +.++.  ..-...++++..+-.
T Consensus       159 ~~i~~~~~i~iGDs~ND~~ml~~ag~~va-m~na~--~~~k~~A~~v~~~~~  207 (215)
T TIGR01487       159 LGIKPEEVAAIGDSENDIDLFRVVGFKVA-VANAD--DQLKEIADYVTSNPY  207 (215)
T ss_pred             hCCCHHHEEEECCCHHHHHHHHhCCCeEE-cCCcc--HHHHHhCCEEcCCCC
Confidence            57889999999999999999999998755 43332  122234666665433

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=97.58  E-value=4.6e-05  Score=46.28  Aligned_cols=32  Identities=25%  Similarity=0.233  Sum_probs=27.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITY   33 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~   33 (75)
                      .++++++|+++|||.+|+.+++.+|..++..+
T Consensus       167 ~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~  198 (202)
T TIGR01490       167 EQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP  198 (202)
T ss_pred             cCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence            46778999999999999999999998876443

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PTZ00445 p36-lilke protein; Provisional

Probab=97.56  E-value=7.1e-05  Score=47.05  Aligned_cols=35  Identities=11%  Similarity=0.279  Sum_probs=31.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      +.|+.|++|++|.|+...+++|++.|+.++.+..+
T Consensus       173 ~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        173 DFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             HcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence            36899999999999999999999999999988654

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.55  E-value=0.00013  Score=46.12  Aligned_cols=35  Identities=23%  Similarity=0.376  Sum_probs=30.9

Q ss_pred             CCCC-CCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~-p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      .|+. |.+|++|.||.+.|++|++.||++|.+....
T Consensus       173 agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~  208 (244)
T KOG3109|consen  173 AGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH  208 (244)
T ss_pred             hCCCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence            3666 9999999999999999999999999886543

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=97.55  E-value=8.7e-05  Score=52.05  Aligned_cols=49  Identities=16%  Similarity=0.148  Sum_probs=34.1

Q ss_pred             CCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeC--CCCCC
Q 048682            4 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP--DLSNV   55 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~l   55 (75)
                      .++++|+||||+.+|+.++++||+   ++.++.........++.++.  ++..+
T Consensus       464 ~~~~~v~~VGDg~nD~~al~~A~v---gia~g~g~~~a~~~Advvl~~~~l~~l  514 (562)
T TIGR01511       464 EKGRVVAMVGDGINDAPALAQADV---GIAIGAGTDVAIEAADVVLMRNDLNDV  514 (562)
T ss_pred             HcCCEEEEEeCCCccHHHHhhCCE---EEEeCCcCHHHHhhCCEEEeCCCHHHH
Confidence            356789999999999999999996   44444433323355777773  55444

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.48  E-value=0.0002  Score=52.24  Aligned_cols=50  Identities=14%  Similarity=0.122  Sum_probs=33.8

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccce--eeCCCCCC
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNV   55 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~--~~~~~~~l   55 (75)
                      +..+++++||||+.+|+.++++||+   ++.++.........++.  ..+++..+
T Consensus       709 ~~~~~~v~~vGDg~nD~~al~~Agv---gia~g~g~~~a~~~ad~vl~~~~~~~i  760 (834)
T PRK10671        709 QSQGRQVAMVGDGINDAPALAQADV---GIAMGGGSDVAIETAAITLMRHSLMGV  760 (834)
T ss_pred             hhcCCEEEEEeCCHHHHHHHHhCCe---eEEecCCCHHHHHhCCEEEecCCHHHH
Confidence            4457889999999999999999998   34444433333344444  34566555

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=97.44  E-value=0.00017  Score=48.16  Aligned_cols=34  Identities=18%  Similarity=0.191  Sum_probs=30.5

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHH-HcCCeEEEEcCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYTS   35 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~-~AG~~~i~v~~~   35 (75)
                      +++.+++++||||.+ .|+.+|+ .+||++|+|...
T Consensus       290 l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE  325 (343)
T TIGR02244       290 LKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE  325 (343)
T ss_pred             HCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence            578899999999996 8999998 999999998653

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.41  E-value=7.4e-05  Score=44.57  Aligned_cols=23  Identities=13%  Similarity=0.190  Sum_probs=21.0

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCe
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMA   28 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~   28 (75)
                      +++|+||||+.+|+++|++|++-
T Consensus       162 ~~~~i~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       162 YQHIIYIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             CceEEEECCCcchhchHhcCCcc
Confidence            78999999999999999999753

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.41  E-value=0.00024  Score=44.97  Aligned_cols=50  Identities=14%  Similarity=0.109  Sum_probs=37.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++++++++|||+.||+.+-+.||...+ +.+..  ..-...++++..+-.+
T Consensus       208 ~gi~~~~v~afGD~~NDi~Ml~~ag~~vA-m~NA~--~~vK~~A~~vt~~n~~  257 (270)
T PRK10513        208 LGIKPEEVMAIGDQENDIAMIEYAGVGVA-MGNAI--PSVKEVAQFVTKSNLE  257 (270)
T ss_pred             hCCCHHHEEEECCchhhHHHHHhCCceEE-ecCcc--HHHHHhcCeeccCCCc
Confidence            68999999999999999999999998544 44432  2223457777766544

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=97.38  E-value=0.00026  Score=43.01  Aligned_cols=33  Identities=15%  Similarity=0.239  Sum_probs=29.7

Q ss_pred             CCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCC
Q 048682            4 ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         4 ~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~   36 (75)
                      ..|++++||||.. +||.+|...|+.+|++..|-
T Consensus       134 ~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv  167 (168)
T PF09419_consen  134 TSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV  167 (168)
T ss_pred             CCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence            3699999999996 89999999999999998763

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=97.22  E-value=0.00024  Score=43.31  Aligned_cols=29  Identities=24%  Similarity=0.173  Sum_probs=26.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACV   30 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i   30 (75)
                      ++++++++++|||+.+|+.+.+.+|+..+
T Consensus       175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       175 LNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             hCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            57788999999999999999999998754

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=97.19  E-value=0.00021  Score=42.33  Aligned_cols=24  Identities=33%  Similarity=0.243  Sum_probs=20.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRA   25 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~A   25 (75)
                      +++++++|++||||.+|+.+++.|
T Consensus       154 ~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       154 SKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             hCCCHHHEEEEeCCHHHHHHHhcC
Confidence            467789999999999999998764

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PRK10976 putative hydrolase; Provisional

Probab=97.15  E-value=0.00027  Score=44.71  Aligned_cols=34  Identities=29%  Similarity=0.443  Sum_probs=29.0

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      ++|++++++++|||+.||+.+-+.||.. |++.+.
T Consensus       201 ~lgi~~~~viafGD~~NDi~Ml~~ag~~-vAm~NA  234 (266)
T PRK10976        201 KLGYSLKDCIAFGDGMNDAEMLSMAGKG-CIMGNA  234 (266)
T ss_pred             HcCCCHHHeEEEcCCcccHHHHHHcCCC-eeecCC
Confidence            3789999999999999999999999985 445444

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.15  E-value=0.00023  Score=44.43  Aligned_cols=32  Identities=16%  Similarity=0.120  Sum_probs=27.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYT   34 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~   34 (75)
                      +|+++++|++|||+.+|+.+.+.+|... ++.+
T Consensus       171 ~g~~~~~~i~~GD~~nD~~ml~~~~~~i-av~n  202 (236)
T TIGR02471       171 WGLPLEQILVAGDSGNDEEMLRGLTLGV-VVGN  202 (236)
T ss_pred             hCCCHHHEEEEcCCccHHHHHcCCCcEE-EEcC
Confidence            6788999999999999999999998654 4544

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.09  E-value=0.0012  Score=40.40  Aligned_cols=50  Identities=26%  Similarity=0.254  Sum_probs=36.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++++++++|||+.+|+.+-+.+|...+ +.+..  ..-...++++..+..+
T Consensus       198 ~~i~~~~~~~~GD~~ND~~Ml~~~~~~~a-m~na~--~~~k~~a~~i~~~~~~  247 (254)
T PF08282_consen  198 LGISPEDIIAFGDSENDIEMLELAGYSVA-MGNAT--PELKKAADYITPSNND  247 (254)
T ss_dssp             HTTSGGGEEEEESSGGGHHHHHHSSEEEE-ETTS---HHHHHHSSEEESSGTC
T ss_pred             cccccceeEEeecccccHhHHhhcCeEEE-EcCCC--HHHHHhCCEEecCCCC
Confidence            57899999999999999999999998744 54432  2223456777766554

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.02  E-value=0.00092  Score=41.45  Aligned_cols=28  Identities=11%  Similarity=0.023  Sum_probs=24.4

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYT   34 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~   34 (75)
                      .+|++||||.+|+.+++.||+++++...
T Consensus       145 ~~~v~vGDs~nDl~ml~~Ag~~ia~~ak  172 (203)
T TIGR02137       145 YRVIAAGDSYNDTTMLSEAHAGILFHAP  172 (203)
T ss_pred             CCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence            3799999999999999999999876543

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=97.02  E-value=0.0014  Score=40.79  Aligned_cols=52  Identities=19%  Similarity=0.318  Sum_probs=37.8

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS   53 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~   53 (75)
                      .|++|.+.+++.|.+.-+.||+.+||.++.+..+............++.+|.
T Consensus       173 iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~  224 (229)
T COG4229         173 IGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE  224 (229)
T ss_pred             cCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence            4789999999999999999999999999877654322111122345566665

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.96  E-value=0.0013  Score=41.28  Aligned_cols=28  Identities=11%  Similarity=0.031  Sum_probs=24.6

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCCeEE
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGMACV   30 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~~~i   30 (75)
                      +.++++|++|||+.+|+.+-+.+|+.++
T Consensus       196 ~~~~~~~i~~GD~~nD~~ml~~ag~~v~  223 (225)
T TIGR02461       196 RPGAIESVGLGDSENDFPMFEVVDLAFL  223 (225)
T ss_pred             ccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence            4467799999999999999999999764

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=96.88  E-value=0.00076  Score=38.83  Aligned_cols=23  Identities=22%  Similarity=0.232  Sum_probs=19.7

Q ss_pred             CC--CCCCcEEEEecCHHhHHHHHH
Q 048682            2 LG--ISEKDCLVVEDSVIGLQAATR   24 (75)
Q Consensus         2 l~--~~p~~~l~igDs~~di~aA~~   24 (75)
                      +|  ++|++|+||||+..++...+.
T Consensus       102 lg~~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       102 LNGVLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             hcCCCCcceEEEECCCHhHHHHHHh
Confidence            57  899999999999999877653

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PLN02887 hydrolase family protein

Probab=96.87  E-value=0.002  Score=45.68  Aligned_cols=51  Identities=18%  Similarity=0.172  Sum_probs=37.3

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      ++|++++++++|||+.||+.+=+.||.. |++.++.  ..-...++++..+-.+
T Consensus       518 ~lGI~~eeviAFGDs~NDIeMLe~AG~g-VAMgNA~--eeVK~~Ad~VT~sNdE  568 (580)
T PLN02887        518 HLGVSPDEIMAIGDGENDIEMLQLASLG-VALSNGA--EKTKAVADVIGVSNDE  568 (580)
T ss_pred             HcCCCHHHEEEEecchhhHHHHHHCCCE-EEeCCCC--HHHHHhCCEEeCCCCc
Confidence            3689999999999999999999999985 4454443  2223456777665443

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=96.78  E-value=0.0013  Score=41.66  Aligned_cols=33  Identities=15%  Similarity=0.038  Sum_probs=27.5

Q ss_pred             CCCC--CCcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            2 LGIS--EKDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         2 l~~~--p~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      ++++  ++++++|||+.+|+.+-+.+|..++ +.+.
T Consensus       188 ~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~va-m~Na  222 (256)
T TIGR01486       188 YNQPGGAIKVVGLGDSPNDLPLLEVVDLAVV-VPGP  222 (256)
T ss_pred             HhhcCCCceEEEEcCCHhhHHHHHHCCEEEE-eCCC
Confidence            4667  8999999999999999999998755 4443

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01686 FkbH FkbH-like domain

Probab=96.73  E-value=0.0014  Score=42.96  Aligned_cols=28  Identities=11%  Similarity=0.139  Sum_probs=25.4

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCe
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMA   28 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~   28 (75)
                      ++|+++++|+||||++.|+.++++++-.
T Consensus        98 ~l~i~~~~~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686        98 KLNLGTDSFLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             HhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence            3789999999999999999999998864

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=96.73  E-value=0.0011  Score=42.07  Aligned_cols=33  Identities=24%  Similarity=0.389  Sum_probs=28.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      +|++++++++|||+.||+.+=+.+|.. |++.+.
T Consensus       200 ~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~Na  232 (272)
T PRK15126        200 LGLSLADCMAFGDAMNDREMLGSVGRG-FIMGNA  232 (272)
T ss_pred             hCCCHHHeEEecCCHHHHHHHHHcCCc-eeccCC
Confidence            689999999999999999999999974 445443

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=96.67  E-value=0.00054  Score=41.03  Aligned_cols=32  Identities=6%  Similarity=0.181  Sum_probs=28.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITY   33 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~   33 (75)
                      +|.++++||+|||++.++.++.++|+++....
T Consensus       108 l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~  139 (162)
T TIGR02251       108 VGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF  139 (162)
T ss_pred             cCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence            57889999999999999999999999877554

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.62  E-value=0.0082  Score=38.55  Aligned_cols=60  Identities=17%  Similarity=0.099  Sum_probs=41.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHc---CCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHHHHHh
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRA---GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNLQ   68 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~A---G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~   68 (75)
                      +++..+++++|||..+|+.+=+.+   +-.+|.+....      ..+.+.++++.++ ...|..+....+
T Consensus       186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~------~~A~~~l~~~~~v-~~~L~~l~~~~~  248 (266)
T PRK10187        186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA------TQASWRLAGVPDV-WSWLEMITTAQQ  248 (266)
T ss_pred             cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC------CcCeEeCCCHHHH-HHHHHHHHHhhh
Confidence            567788999999999998887766   34556664432      3366788888877 566666554433

>PRK08238 hypothetical protein; Validated

Probab=96.56  E-value=0.0047  Score=42.96  Aligned_cols=30  Identities=17%  Similarity=0.120  Sum_probs=25.0

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      .++++|+|||.+|+.+++.|| ..++|..+.
T Consensus       139 ~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238        139 ERGFDYAGNSAADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence            356999999999999999999 667776544

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.51  E-value=0.0025  Score=40.66  Aligned_cols=29  Identities=14%  Similarity=-0.004  Sum_probs=25.8

Q ss_pred             CCC---CCCcEEEEecCHHhHHHHHHcCCeEE
Q 048682            2 LGI---SEKDCLVVEDSVIGLQAATRAGMACV   30 (75)
Q Consensus         2 l~~---~p~~~l~igDs~~di~aA~~AG~~~i   30 (75)
                      +|+   ++++++.|||+.||+.+=+.||..++
T Consensus       199 lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvA  230 (271)
T PRK03669        199 YQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVV  230 (271)
T ss_pred             HHhhcCCCceEEEEcCCHHHHHHHHhCCEEEE
Confidence            567   89999999999999999999997544

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.41  E-value=0.0016  Score=41.20  Aligned_cols=30  Identities=23%  Similarity=0.419  Sum_probs=27.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVI   31 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~   31 (75)
                      +|++++++++|||+.+|+.+=+.+|..+++
T Consensus       201 lgi~~~~v~afGD~~ND~~Ml~~ag~gvam  230 (264)
T COG0561         201 LGIKLEEVIAFGDSTNDIEMLEVAGLGVAM  230 (264)
T ss_pred             hCCCHHHeEEeCCccccHHHHHhcCeeeec
Confidence            688999999999999999999999987553

>PLN02382 probable sucrose-phosphatase

Probab=96.30  E-value=0.0065  Score=41.44  Aligned_cols=34  Identities=18%  Similarity=0.127  Sum_probs=29.8

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      |++++++++||||.||++.=..+|...|++.+..
T Consensus       191 gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~  224 (413)
T PLN02382        191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ  224 (413)
T ss_pred             CCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence            8899999999999999999999997677776554

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=96.24  E-value=0.0031  Score=41.13  Aligned_cols=22  Identities=18%  Similarity=0.197  Sum_probs=20.1

Q ss_pred             CCCCcEEEEecCHHhHHHHHHc
Q 048682            4 ISEKDCLVVEDSVIGLQAATRA   25 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~A   25 (75)
                      .++++||+||||.+|+.+|...
T Consensus       209 ~~~~~vI~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       209 KDRSNIILLGDSQGDLRMADGV  230 (277)
T ss_pred             CCcceEEEECcChhhhhHhcCC
Confidence            6789999999999999998766

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=96.18  E-value=0.0024  Score=44.89  Aligned_cols=26  Identities=31%  Similarity=0.427  Sum_probs=23.5

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCCe
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGMA   28 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~~   28 (75)
                      ++++++|+||||+..|+++|++||.+
T Consensus       281 ~Id~~~S~~VGDaagr~~~g~~ag~~  306 (526)
T TIGR01663       281 EIQEDDCFFVGDAAGRPANGKAAGKK  306 (526)
T ss_pred             CCCHHHeEEeCCcccchHHHHhcCCC
Confidence            58899999999999999999988864

Note that the EC number for the kinase function is: 2.7.1.78

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=95.85  E-value=0.039  Score=40.25  Aligned_cols=47  Identities=17%  Similarity=0.111  Sum_probs=31.2

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceee--CCCCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l   55 (75)
                      ++.++||||+.+|..+.+.|+   |++..+.........++.++  +++..+
T Consensus       628 ~~~v~mvGDgiNDapAl~~A~---vgia~g~~~~~a~~~adivl~~~~l~~l  676 (741)
T PRK11033        628 HAPLAMVGDGINDAPAMKAAS---IGIAMGSGTDVALETADAALTHNRLRGL  676 (741)
T ss_pred             CCCEEEEECCHHhHHHHHhCC---eeEEecCCCHHHHHhCCEEEecCCHHHH
Confidence            467999999999999999999   44444443333334455544  445444

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=95.79  E-value=0.009  Score=35.34  Aligned_cols=50  Identities=10%  Similarity=0.156  Sum_probs=37.3

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      -+.|+||||..+|+.+-++|-+-.+-+....-....+..+|.++.+..++
T Consensus        93 ~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~  142 (152)
T COG4087          93 YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEI  142 (152)
T ss_pred             CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHH
Confidence            37899999999999999999988776655433333345678888776655

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=95.48  E-value=0.031  Score=41.41  Aligned_cols=47  Identities=17%  Similarity=0.090  Sum_probs=33.1

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCC-chhhhhccceee--CCCCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMACVITYTSST-AEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~-~~~~~~~~~~~~--~~~~~l   55 (75)
                      .+.+.|+||+.+|+.|.++|++   +|..+.. ..-....+|.++  +++..+
T Consensus       617 g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~~i  666 (884)
T TIGR01522       617 GDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFATI  666 (884)
T ss_pred             CCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHHHH
Confidence            4678999999999999999994   5555532 222224578887  556665

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=95.42  E-value=0.013  Score=36.43  Aligned_cols=26  Identities=23%  Similarity=0.152  Sum_probs=23.1

Q ss_pred             EEEEecCHHhHHHHHHcCCeEEEEcC
Q 048682            9 CLVVEDSVIGLQAATRAGMACVITYT   34 (75)
Q Consensus         9 ~l~igDs~~di~aA~~AG~~~i~v~~   34 (75)
                      -|..|||.+||.||+.||++.|-+..
T Consensus       187 ~IhYGDSD~Di~AAkeaG~RgIRilR  212 (237)
T COG3700         187 RIHYGDSDNDITAAKEAGARGIRILR  212 (237)
T ss_pred             eEEecCCchhhhHHHhcCccceeEEe
Confidence            57889999999999999999987754

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=95.41  E-value=0.012  Score=37.44  Aligned_cols=34  Identities=26%  Similarity=0.289  Sum_probs=25.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +++++++++++|||-+|+.+= ..+.+.|.|.+..
T Consensus       177 ~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~  210 (247)
T PF05116_consen  177 WGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ  210 (247)
T ss_dssp             HT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred             hCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence            578899999999999999877 7888889887644

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=95.36  E-value=0.024  Score=33.92  Aligned_cols=27  Identities=19%  Similarity=0.175  Sum_probs=19.5

Q ss_pred             CCCCcEEEEecC-----------HHhHHHHHHcCCeEE
Q 048682            4 ISEKDCLVVEDS-----------VIGLQAATRAGMACV   30 (75)
Q Consensus         4 ~~p~~~l~igDs-----------~~di~aA~~AG~~~i   30 (75)
                      ++.++++||||+           .+|.+-|.+.|++..
T Consensus       116 id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen  116 IDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             ccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence            578999999996           689999999999743

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=94.96  E-value=0.026  Score=35.27  Aligned_cols=30  Identities=27%  Similarity=0.394  Sum_probs=27.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVI   31 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~   31 (75)
                      +|+++++++++|||.+|+-.=..||.+.+.
T Consensus       156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~  185 (212)
T COG0560         156 LGIPLEETVAYGDSANDLPMLEAAGLPIAV  185 (212)
T ss_pred             cCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence            588899999999999999999999998663

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=94.42  E-value=0.05  Score=40.54  Aligned_cols=48  Identities=15%  Similarity=0.175  Sum_probs=32.6

Q ss_pred             CCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCC--CCCC
Q 048682            5 SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD--LSNV   55 (75)
Q Consensus         5 ~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~l   55 (75)
                      ..+.+.|+||+.+|+.|-+.|++. |++  +.........+++++.+  |..+
T Consensus       629 ~g~~va~iGDG~ND~~alk~AdVG-ia~--g~g~~~ak~aAD~vl~dd~f~~i  678 (917)
T TIGR01116       629 QGEIVAMTGDGVNDAPALKKADIG-IAM--GSGTEVAKEASDMVLADDNFATI  678 (917)
T ss_pred             cCCeEEEecCCcchHHHHHhCCee-EEC--CCCcHHHHHhcCeEEccCCHHHH
Confidence            346688999999999999999983 333  32222223457888766  5554

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.01  E-value=0.088  Score=32.06  Aligned_cols=35  Identities=23%  Similarity=0.248  Sum_probs=30.4

Q ss_pred             CCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCc
Q 048682            4 ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA   38 (75)
Q Consensus         4 ~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~   38 (75)
                      ..+++.+||||.. +||..|..-|--.|++..+...
T Consensus       137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~  172 (190)
T KOG2961|consen  137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRA  172 (190)
T ss_pred             CChhHeEEEccchhhhHhhhhhccceeEEecccccc
Confidence            4688999999996 8999999999999998776543

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=93.70  E-value=0.09  Score=38.17  Aligned_cols=53  Identities=13%  Similarity=-0.078  Sum_probs=36.8

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcC--CeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHH
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAG--MACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG--~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   62 (75)
                      +++++.+++|||+.+|+.+-+.++  ..+|.+...      ...+.+++++..++ ...|..
T Consensus       668 ~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~------~s~A~~~l~~~~eV-~~~L~~  722 (726)
T PRK14501        668 AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG------ESRARYRLPSQREV-RELLRR  722 (726)
T ss_pred             cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC------CCcceEeCCCHHHH-HHHHHH
Confidence            457889999999999999999874  344555332      23467888887664 444444

>PLN02423 phosphomannomutase

Probab=92.87  E-value=0.099  Score=33.17  Aligned_cols=32  Identities=3%  Similarity=-0.151  Sum_probs=28.6

Q ss_pred             CCCcEEEEec----CHHhHHHHHHcCCeEEEEcCCC
Q 048682            5 SEKDCLVVED----SVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         5 ~p~~~l~igD----s~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +++++++|||    ..||++.-+.-|+.++.|.++.
T Consensus       199 ~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~  234 (245)
T PLN02423        199 DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD  234 (245)
T ss_pred             CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence            7899999999    7999999999999999987653

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=92.40  E-value=0.27  Score=36.72  Aligned_cols=56  Identities=11%  Similarity=0.002  Sum_probs=37.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcC-------------CeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAG-------------MACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG-------------~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~   64 (75)
                      +|..++.+++|||..+|..+=+.++             ..+|-|..+      ...+.+.+++..++ ...|+.+.
T Consensus       777 ~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~------~S~A~y~L~d~~eV-~~lL~~L~  845 (854)
T PLN02205        777 RGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK------PSKAKYYLDDTAEI-VRLMQGLA  845 (854)
T ss_pred             cCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC------CccCeEecCCHHHH-HHHHHHHH
Confidence            4778899999999999988877665             233444221      23456778887776 55555433

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=92.12  E-value=0.22  Score=34.68  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=25.9

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHc-CCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRA-GMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~A-G~~~i~v~~~~   36 (75)
                      +|..-.+++||||+. .||...+.. |++|++|-..-
T Consensus       291 l~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~EL  327 (448)
T PF05761_consen  291 LGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPEL  327 (448)
T ss_dssp             CT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTH
T ss_pred             HccCCCeEEEECCchhhhhhhhccccceEEEEEehhh
Confidence            456678999999997 799888887 99999996543

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=91.80  E-value=0.32  Score=29.58  Aligned_cols=37  Identities=22%  Similarity=0.425  Sum_probs=26.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA   38 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~   38 (75)
                      .|++.++.++|.|-...++...+.|+.+|.++.|.+.
T Consensus       120 tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~  156 (169)
T PF12689_consen  120 TGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTW  156 (169)
T ss_dssp             H---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--H
T ss_pred             cCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCH
Confidence            3788999999999999999999999999999887543

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=91.69  E-value=0.21  Score=30.82  Aligned_cols=31  Identities=26%  Similarity=0.263  Sum_probs=26.4

Q ss_pred             EEEEecCH-HhHHHHHHcCCeEEEEcCCCCch
Q 048682            9 CLVVEDSV-IGLQAATRAGMACVITYTSSTAE   39 (75)
Q Consensus         9 ~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~   39 (75)
                      -+++||+. +-++.|+++|++++.+.+++...
T Consensus       136 dlf~ed~~~na~~iAk~~~~~vilins~ynRk  167 (194)
T COG5663         136 DLFFEDSHDNAGQIAKNAGIPVILINSPYNRK  167 (194)
T ss_pred             CccccccCchHHHHHHhcCCcEEEecCccccc
Confidence            36899995 88999999999999998887643

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=91.57  E-value=0.13  Score=31.19  Aligned_cols=43  Identities=9%  Similarity=0.255  Sum_probs=31.0

Q ss_pred             EEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682           10 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus        10 l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|+|++.-+..+..+|+++|.+..++.....   ....+.+..|+
T Consensus       139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei  181 (191)
T PF06941_consen  139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEI  181 (191)
T ss_dssp             EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSH
T ss_pred             EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHH
Confidence            79999999999999999999999877644222   45678888887

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=91.53  E-value=0.4  Score=30.91  Aligned_cols=54  Identities=20%  Similarity=0.226  Sum_probs=38.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh-h-hhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-D-FKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~-~-~~~~~~~~~~~~~l   55 (75)
                      +|.++.+.+++-|-+.-..+|+.||+.+..+..+....- + ......++.+|..+
T Consensus       193 Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l  248 (254)
T KOG2630|consen  193 IGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL  248 (254)
T ss_pred             hCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence            578899999999999999999999999987766543221 1 11123456666544

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=91.41  E-value=0.099  Score=32.72  Aligned_cols=24  Identities=25%  Similarity=0.263  Sum_probs=20.5

Q ss_pred             CCCCcEEEEecCHHhHHHHHHcCC
Q 048682            4 ISEKDCLVVEDSVIGLQAATRAGM   27 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~AG~   27 (75)
                      -+++..+|+|||.+|+.||+..-.
T Consensus       157 e~~e~~fy~GDsvsDlsaaklsDl  180 (220)
T COG4359         157 EPNESIFYCGDSVSDLSAAKLSDL  180 (220)
T ss_pred             cCCceEEEecCCcccccHhhhhhh
Confidence            356788999999999999998764

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=91.27  E-value=0.89  Score=28.56  Aligned_cols=26  Identities=4%  Similarity=-0.080  Sum_probs=20.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGM   27 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~   27 (75)
                      ++++|++|++|||+..|++.-...|.
T Consensus        91 ~~~~~~~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        91 FDIRNGIIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             ccCCCceEEEeCCcccchhhhcCCCc
Confidence            45678999999999988887755443

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN02580 trehalose-phosphatase

Probab=90.45  E-value=0.81  Score=31.34  Aligned_cols=51  Identities=18%  Similarity=0.151  Sum_probs=33.4

Q ss_pred             EEEecCHHhHHHHHH-----cCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHHHH
Q 048682           10 LVVEDSVIGLQAATR-----AGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN   66 (75)
Q Consensus        10 l~igDs~~di~aA~~-----AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~   66 (75)
                      ++|||..+|..+=+.     .|+ .|.|..+.    ....+.+.+++..++ .+.|..+...
T Consensus       324 i~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~----~~t~A~y~L~dp~eV-~~~L~~L~~~  379 (384)
T PLN02580        324 IYIGDDRTDEDAFKVLREGNRGY-GILVSSVP----KESNAFYSLRDPSEV-MEFLKSLVTW  379 (384)
T ss_pred             EEECCCchHHHHHHhhhccCCce-EEEEecCC----CCccceEEcCCHHHH-HHHHHHHHHh
Confidence            799999999888765     343 45554432    123467888998888 5666554443

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=88.96  E-value=0.7  Score=33.93  Aligned_cols=34  Identities=6%  Similarity=-0.025  Sum_probs=27.2

Q ss_pred             CCCCCCcEEEE--ecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~i--gDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      ++++.++++.|  ||+.||+.+=+.||..++ +..+.
T Consensus       625 ~gI~~~eViafalGDs~NDisMLe~Ag~gVA-M~~~~  660 (694)
T PRK14502        625 FRLNFGNIHTFGLGDSENDYSMLETVDSPIL-VQRPG  660 (694)
T ss_pred             hCCCccceEEEEcCCcHhhHHHHHhCCceEE-EcCCC
Confidence            46677888888  999999999999999755 44433

>PTZ00174 phosphomannomutase; Provisional

Probab=87.59  E-value=0.48  Score=29.94  Aligned_cols=29  Identities=7%  Similarity=-0.147  Sum_probs=25.3

Q ss_pred             CCcEEEEec----CHHhHHHHHHcCCeEEEEcC
Q 048682            6 EKDCLVVED----SVIGLQAATRAGMACVITYT   34 (75)
Q Consensus         6 p~~~l~igD----s~~di~aA~~AG~~~i~v~~   34 (75)
                      ++++++|||    +.||+.+=+.++...++|.+
T Consensus       200 ~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n  232 (247)
T PTZ00174        200 FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN  232 (247)
T ss_pred             hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence            579999999    89999999998887787763

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=86.69  E-value=0.16  Score=30.90  Aligned_cols=30  Identities=17%  Similarity=0.454  Sum_probs=27.1

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEE
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACV   30 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i   30 (75)
                      ++++.+++|.||||-.+|+-.=.+.|.++.
T Consensus        94 ~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a  123 (170)
T COG1778          94 KLNLDPEEVAYVGDDLVDLPVMEKVGLSVA  123 (170)
T ss_pred             HhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence            368999999999999999999999998765

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=85.03  E-value=2.2  Score=27.81  Aligned_cols=24  Identities=21%  Similarity=0.195  Sum_probs=17.9

Q ss_pred             CCCcEEEEecCHHhHHHHHHcCCe
Q 048682            5 SEKDCLVVEDSVIGLQAATRAGMA   28 (75)
Q Consensus         5 ~p~~~l~igDs~~di~aA~~AG~~   28 (75)
                      .+..+++||||.+|++.-+.+.-+
T Consensus       205 ~d~sa~~VGDSItDv~ml~~~rgr  228 (315)
T COG4030         205 IDFSAVVVGDSITDVKMLEAARGR  228 (315)
T ss_pred             CCcceeEecCcccchHHHHHhhcc
Confidence            345589999999998876666543

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=83.16  E-value=5.6  Score=26.58  Aligned_cols=29  Identities=38%  Similarity=0.363  Sum_probs=21.4

Q ss_pred             EEEEecCHHhHH-HHHHcCCeEEEEcCCCCc
Q 048682            9 CLVVEDSVIGLQ-AATRAGMACVITYTSSTA   38 (75)
Q Consensus         9 ~l~igDs~~di~-aA~~AG~~~i~v~~~~~~   38 (75)
                      .+|||||- ||+ -|-..|.++|-+......
T Consensus       260 ~~vvgdSs-GI~eEa~~lg~P~v~iR~~geR  289 (346)
T PF02350_consen  260 DLVVGDSS-GIQEEAPSLGKPVVNIRDSGER  289 (346)
T ss_dssp             SEEEESSH-HHHHHGGGGT--EEECSSS-S-
T ss_pred             eEEEEcCc-cHHHHHHHhCCeEEEecCCCCC
Confidence            46899999 999 999999999988654433

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=81.28  E-value=2.8  Score=25.61  Aligned_cols=27  Identities=19%  Similarity=0.160  Sum_probs=24.4

Q ss_pred             EEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            9 CLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         9 ~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      -++|+.+.++.-.|...|+++|++.+.
T Consensus       259 ~~~Is~RlH~~I~a~~~g~P~i~i~y~  285 (286)
T PF04230_consen  259 DLVISMRLHGAILALSLGVPVIAISYD  285 (286)
T ss_pred             CEEEecCCHHHHHHHHcCCCEEEEecC
Confidence            468999999999999999999999764

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PLN03190 aminophospholipid translocase; Provisional

Probab=80.96  E-value=1.2  Score=34.48  Aligned_cols=47  Identities=9%  Similarity=-0.036  Sum_probs=34.0

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      .-+++|||+.||+-+=++|.+-. ++.+..+. +....+|+.+..|..|
T Consensus       872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~-qA~~aSDfaI~~Fr~L  918 (1178)
T PLN03190        872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGR-QAVMASDFAMGQFRFL  918 (1178)
T ss_pred             cEEEEECCCcchHHHHHhcCeee-eecCchhH-HHHHhhccchhhhHHH
Confidence            45899999999999999998754 66433221 2334678888887766

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	75
1te2_A	226	Putative phosphatase; structural genomics, phospha	6e-15
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	1e-13
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	2e-13
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	6e-13
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	9e-13
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	1e-12
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	1e-12
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	3e-12
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	4e-12
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	5e-12
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	1e-11
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	2e-11
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	9e-10
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	8e-08
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	7e-06
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	9e-06
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	4e-05
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	5e-05
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	1e-04
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	3e-04
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	3e-04
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	3e-04
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	8e-04

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score = 65.0 bits (159), Expect = 6e-15
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
           +LG+    C+ +EDSV G+ A+  A M  + +    +  +  F  A      L+ +  KD
Sbjct: 162 KLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKD 221

Query: 60  L 60
           L
Sbjct: 222 L 222

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score = 61.6 bits (150), Expect = 1e-13
 Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLK 58
           + G    + LV+E++ +G+QA   AG+  +   T    +    +  A  ++  + +   K
Sbjct: 177 KGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN-K 235

Query: 59  DLELLLQNLQQ 69
           + E L   L+Q
Sbjct: 236 NWETLQSALKQ 246

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score = 61.2 bits (149), Expect = 2e-13
 Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLK 58
           + G+   + +V+E++ +G++A  +AG+  +   T     Q   DA A  ++P +  +   
Sbjct: 178 KGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL-CD 236

Query: 59  DLELLL 64
             + ++
Sbjct: 237 SWDTIM 242

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score = 59.5 bits (145), Expect = 6e-13
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
            +G++  + + +EDS  G+QA   +G   + +        +D  D I I PD S+  L+ 
Sbjct: 157 AVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-----GRPEDLGDDIVIVPDTSHYTLEF 211

Query: 60  LE 61
           L+
Sbjct: 212 LK 213

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score = 59.7 bits (145), Expect = 9e-13
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 1   RLG--ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLK 58
           R     + + CLV ED+  G++AA  AGM  V+    + +      A  +   L + + +
Sbjct: 183 RFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPE 242

Query: 59  DLEL 62
              L
Sbjct: 243 LFGL 246

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score = 58.7 bits (143), Expect = 1e-12
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           +L +     L++EDS  G+ A   A +        +    D   A  +   L++V    L
Sbjct: 157 QLNVQASRALIIEDSEKGIAAGVAADVEVWA-IRDNEFGMDQSAAKGLLDSLTDV----L 211

Query: 61  ELL 63
           +L+
Sbjct: 212 DLI 214

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score = 58.8 bits (143), Expect = 1e-12
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
            LG+  + C+ +ED+  G+ A   +GM  V I             A  + P   ++    
Sbjct: 161 GLGVPPQACIGIEDAQAGIDAINASGMRSVGIG-------AGLTGAQLLLPSTESLTWPR 213

Query: 60  LELLLQNLQQ 69
           L    QN+ +
Sbjct: 214 LSAFWQNVAE 223

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score = 57.7 bits (140), Expect = 3e-12
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
            L +S  DC  +ED+  G+ A   AGM  V         Q    A  +    S++ L+ L
Sbjct: 158 MLDVSPADCAAIEDAEAGISAIKSAGMFAVGV----GQGQPMLGADLVVRQTSDLTLELL 213

Query: 61  ELLLQNLQQLN 71
               +  +   
Sbjct: 214 HEEWEQYRIRE 224

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 57.3 bits (139), Expect = 5e-12
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 10/72 (13%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMAC--VITYTSSTAEQDFKDAIAIYPDLSNVRLK 58
           ++G    +CLV+ D++  + AA R       +++      E +   A+ +Y D  +    
Sbjct: 159 KIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLD---- 214

Query: 59  DLELLLQNLQQL 70
               LL +L ++
Sbjct: 215 ----LLNHLDEI 222

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score = 56.7 bits (137), Expect = 1e-11
 Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 8/68 (11%)

Query: 1   RLGISEK-------DCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDL 52
            LG             +V ED+  G+ A   AG   V I  T        K    I  + 
Sbjct: 182 GLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNH 241

Query: 53  SNVRLKDL 60
            ++R+ + 
Sbjct: 242 ESIRVGEY 249

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score = 55.7 bits (135), Expect = 2e-11
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
           + G+S    +VVEDSV G+  A  AGM  +  T  S T             +    R++D
Sbjct: 155 QFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQD 214

Query: 60  LELLLQNLQQL 70
           L  ++  + + 
Sbjct: 215 LPAVIAAMAEW 225

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score = 51.2 bits (123), Expect = 9e-10
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD------AIAIYPDLSN 54
           +LGI  + C+V+EDSV G  A   AG              D         A  +    + 
Sbjct: 180 QLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAE 239

Query: 55  VR 56
           +R
Sbjct: 240 LR 241

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score = 46.1 bits (109), Expect = 8e-08
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 1   RLGISEKD-CLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLK 58
            L +   + C+ V+D++ G++   RAGM  V ++ + +    D +D  A+  D      +
Sbjct: 180 ELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQ 239

Query: 59  DLELLLQ 65
             E  L 
Sbjct: 240 HAEQRLF 246

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 40.6 bits (95), Expect = 7e-06
 Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 1   RLGIS-EKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLK 58
            LG+      + V D+V  ++    AGM  V +   SS      ++   +       +++
Sbjct: 172 ELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIE 231

Query: 59  DLELLLQ 65
            +     
Sbjct: 232 VVRNRFV 238

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 40.3 bits (94), Expect = 9e-06
 Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 1   RLGIS-EKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLK 58
            L +S  + C+++      LQ+   AG+  + +               A+       R  
Sbjct: 99  ALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRA 158

Query: 59  DLELLLQ 65
              L L 
Sbjct: 159 QATLKLY 165

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 37.8 bits (88), Expect = 4e-05
 Identities = 10/52 (19%), Positives = 24/52 (46%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL 52
            + +  +DC++V+DS++ ++ A  AG+  V       A  +      +  + 
Sbjct: 86  AIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDRAVVEIVGLFGLEGEF 137

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 38.2 bits (88), Expect = 5e-05
 Identities = 9/68 (13%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 1   RLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
             G++  ++   ++DS   ++   + GM   I    +   +           +S+  + +
Sbjct: 216 ESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--ILE 273

Query: 60  LELLLQNL 67
           L  ++ +L
Sbjct: 274 LPHVVSDL 281

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 1   RLGIS-EKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAE-QDFKDAIAI 48
            + I   K+   + DS+  +Q+A  AG   +    T+   +   FK+   I
Sbjct: 171 NINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNIIKDILSFKNFYDI 221

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 36.3 bits (83), Expect = 3e-04
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
              +++ D  +V DS+  L +A + G   + T T    +    +  A + D     L +L
Sbjct: 310 DNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369

Query: 61  ELLLQNL 67
             +L NL
Sbjct: 370 RGVLDNL 376

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV 30
           +  IS    LV+ D  I ++A   AG+   
Sbjct: 149 KYQISS--GLVIGDRPIDIEAGQAAGLDTH 176

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 7/30 (23%), Positives = 15/30 (50%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV 30
           ++ ++ ++ L + DSV   Q A  A +   
Sbjct: 150 KVNVAPQNALFIGDSVSDEQTAQAANVDFG 179

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 34.9 bits (81), Expect = 8e-04
 Identities = 7/30 (23%), Positives = 10/30 (33%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV 30
              +S    ++V D    L     AG   V
Sbjct: 139 AWDVSPSRMVMVGDYRFDLDCGRAAGTRTV 168

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	75
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.63
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.58
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.49
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.48
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.47
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.45
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.44
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.44
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.42
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.41
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.4
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.4
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.4
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.4
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.39
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.37
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.37
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.36
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.36
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.34
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.34
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.34
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.33
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.33
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.33
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.33
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.32
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.31
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.31
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.31
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.31
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.3
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.3
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.29
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.29
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.29
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.29
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.29
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.28
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.28
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.28
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.28
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.28
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.27
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.26
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.26
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.25
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.25
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.24
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.24
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.24
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.23
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.23
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.23
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.23
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.22
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.22
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.22
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.21
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.21
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.21
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.21
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.2
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.2
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.2
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.2
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.19
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.16
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.14
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.12
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.04
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.0
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	98.99
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.99
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.97
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.93
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	98.92
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	98.91
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.9
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	98.87
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	98.86
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.86
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.83
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.81
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.8
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.79
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.77
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.75
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.73
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	98.72
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.66
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.65
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	98.65
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.63
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.63
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.63
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.63
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.05
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.62
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	98.61
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.59
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.57
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.56
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.55
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.55
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.54
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.53
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.53
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.51
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.5
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.5
2zg6_A	220	Putative uncharacterized protein ST2620, probable	98.5
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.47
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.44
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.44
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.39
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	98.39
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.39
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.35
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	98.33
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.31
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.29
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.25
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	98.25
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	98.2
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.14
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	98.1
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	98.06
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.99
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.96
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.88
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	97.84
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	97.8
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.49
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	97.47
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	97.47
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	97.45
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.23
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.86
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	96.18
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	96.11
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.11
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	95.81
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.27
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	92.86
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	92.64
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	91.82
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	90.9
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	90.21
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	86.83
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	84.11
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	82.94
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	82.62
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	81.21

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.63  E-value=8.6e-16  Score=94.84  Aligned_cols=62  Identities=18%  Similarity=0.316  Sum_probs=53.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNL   67 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~   67 (75)
                      +|++|++|+|||||.+|+++|++|||++|+|.+..    .+..++++++++.++.++.|.+.+.++
T Consensus       183 lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~----~~~~ad~vi~~l~eL~~~~i~~~~n~~  244 (250)
T 4gib_A          183 LNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYE----NLKKANLVVDSTNQLKFEYIQEKYNEY  244 (250)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTT----TTTTSSEEESSGGGCCHHHHHHHHHHH
T ss_pred             hCCChHHeEEECCCHHHHHHHHHcCCEEEEECChh----HhccCCEEECChHhCCHHHHHHHHHHH
Confidence            68999999999999999999999999999996532    345689999999999988888766554

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.58  E-value=3.6e-15  Score=91.85  Aligned_cols=61  Identities=26%  Similarity=0.425  Sum_probs=54.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHHHHHh
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNLQ   68 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~   68 (75)
                      +|++|++|+|||||.+|+++|++|||++|+|.++..      .++..+++..++.++.|..+++.+.
T Consensus       162 lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~------~ad~~~~~~~~l~~~~l~~~~~~l~  222 (243)
T 4g9b_A          162 LGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT------GAQLLLPSTESLTWPRLSAFWQNVA  222 (243)
T ss_dssp             HTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC------SCSEEESSGGGCCHHHHHHHHHHHS
T ss_pred             cCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC------cHHHhcCChhhcCHHHHHHHHHHHH
Confidence            689999999999999999999999999999998764      3567889999999999988887763

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.49  E-value=3.3e-14  Score=86.04  Aligned_cols=67  Identities=24%  Similarity=0.394  Sum_probs=56.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCCCHHHHHHHHHHHhh
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLLQNLQQ   69 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~   69 (75)
                      +|++|++|++|||+.+|+++|++||+.+|++.++......+  ..++++++++.++ .+.|..++..++|
T Consensus       178 lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el-~~~l~~~~~~~~~  246 (247)
T 3dv9_A          178 GGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDF-NKNWETLQSALKQ  246 (247)
T ss_dssp             HTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHH-HHHHHHHHHHHCC
T ss_pred             cCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHH-HHHHHHHHHHhcC
Confidence            68999999999999999999999999999999887654443  3689999999998 6777777766544

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.48  E-value=4.3e-14  Score=84.95  Aligned_cols=55  Identities=11%  Similarity=0.133  Sum_probs=46.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+|||||.+|+++|++|||++|++.++......+  ..++++++++.++
T Consensus       149 ~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el  205 (210)
T 2ah5_A          149 THQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             HcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            378999999999999999999999999999999887544343  3578999998776

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.47  E-value=1.9e-14  Score=84.74  Aligned_cols=54  Identities=26%  Similarity=0.250  Sum_probs=46.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l   55 (75)
                      +|++|++|+||||+.+|+++|+++||++|+|.++.......    ..++++++++.++
T Consensus       114 ~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el  171 (179)
T 3l8h_A          114 YDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV  171 (179)
T ss_dssp             HTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHH
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHH
Confidence            58899999999999999999999999999999987544333    4578999998776

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.45  E-value=4.4e-14  Score=84.67  Aligned_cols=61  Identities=21%  Similarity=0.260  Sum_probs=44.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEE-EEcCCCCchhhhh-ccceeeCCCCCCCHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFK-DAIAIYPDLSNVRLKDLELL   63 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i-~v~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~   63 (75)
                      +|++|++|+|||||.+|+++|++|||++| ++.++....+.+. .....+.++.++ ++.|+++
T Consensus       153 lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~el-i~~l~eL  215 (216)
T 3kbb_A          153 LNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEI-LNVLKEV  215 (216)
T ss_dssp             HTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGH-HHHHHHH
T ss_pred             hCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHH-HHHHHHH
Confidence            68999999999999999999999999998 5788776554442 222334456665 5555543

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.44  E-value=1.7e-13  Score=82.51  Aligned_cols=65  Identities=25%  Similarity=0.277  Sum_probs=52.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHHHHHhhc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNLQQL   70 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~   70 (75)
                      +|++|++|+||||+.+|+++|++|||.++++.+..    ....++++++++.++.+..+.+.+..+++-
T Consensus       159 lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~----~~~~ad~v~~s~~el~~~~~~~~~~~~~~~  223 (233)
T 3nas_A          159 LDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQ----PMLGADLVVRQTSDLTLELLHEEWEQYRIR  223 (233)
T ss_dssp             HTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCCHHHHHHHHHHHHHT
T ss_pred             cCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCcc----ccccCCEEeCChHhCCHHHHHHHHHHHHhh
Confidence            68999999999999999999999999999986542    234789999999999988888777776553

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.44  E-value=3.3e-13  Score=81.51  Aligned_cols=63  Identities=14%  Similarity=0.188  Sum_probs=49.4

Q ss_pred             CCCCC-CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc-----------------------hhhh--hccceeeCCCCCC
Q 048682            2 LGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTA-----------------------EQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p-~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~-----------------------~~~~--~~~~~~~~~~~~l   55 (75)
                      +++.| ++|+|||||.+|+++|++|||++|+|.+++..                       ...+  ..++++++++.++
T Consensus       100 l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL  179 (196)
T 2oda_A          100 LNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGEL  179 (196)
T ss_dssp             TTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGH
T ss_pred             cCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHH
Confidence            67865 89999999999999999999999999988642                       0111  3578999999998


Q ss_pred             CHHHHHHHHH
Q 048682           56 RLKDLELLLQ   65 (75)
Q Consensus        56 ~~~~l~~~~~   65 (75)
                       ++.|..+.+
T Consensus       180 -~~~l~~~~~  188 (196)
T 2oda_A          180 -ESCLADIAL  188 (196)
T ss_dssp             -HHHHHHHHH
T ss_pred             -HHHHHHHHH
Confidence             566655443

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.42  E-value=3.8e-13  Score=80.75  Aligned_cols=62  Identities=11%  Similarity=0.224  Sum_probs=50.7

Q ss_pred             CC--CCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCCCHHHHHHHH
Q 048682            2 LG--ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLL   64 (75)
Q Consensus         2 l~--~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~   64 (75)
                      +|  ++|++|++||||.+|+++|++||+.+|+|.++.......  ..++++++++.++ ...|..+.
T Consensus       164 lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el-~~~l~~~~  229 (234)
T 2hcf_A          164 TGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET-DEVLASIL  229 (234)
T ss_dssp             HCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCH-HHHHHHHH
T ss_pred             hCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhH-HHHHHHHh
Confidence            46  899999999999999999999999999999876554433  2488999999998 56655543

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.41  E-value=2.6e-13  Score=82.50  Aligned_cols=61  Identities=18%  Similarity=0.406  Sum_probs=50.8

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCCCHHHHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~   62 (75)
                      ++|++|++|++|||+.+|+++|++||+.+|++.++......+  ..++++++++.++ .+.|.+
T Consensus       178 ~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el-~~~l~~  240 (243)
T 3qxg_A          178 KGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL-CDSWDT  240 (243)
T ss_dssp             HTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHH-HHHHHH
T ss_pred             HcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHH-HHHHHh
Confidence            378999999999999999999999999999999887654443  3689999998877 555544

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.40  E-value=1.9e-13  Score=84.64  Aligned_cols=69  Identities=19%  Similarity=0.212  Sum_probs=53.0

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchh---hhhccceeeCCCCCCCHHHHHHHHHHHhhcc
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQ---DFKDAIAIYPDLSNVRLKDLELLLQNLQQLN   71 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~   71 (75)
                      +|++|++|+||||+. +|+++|++|||.+|++.++.....   ....++++++++.++ +..|.++...-.+.+
T Consensus       174 ~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el-~~~l~~~~~~~~~~~  246 (263)
T 3k1z_A          174 AHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHL-LPALDCLEGSAENLY  246 (263)
T ss_dssp             HTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGH-HHHHHHHHHC-----
T ss_pred             cCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHH-HHHHHHHHhcCCCCc
Confidence            588999999999997 999999999999999998764432   124689999999999 677777655544443

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.40  E-value=1e-12  Score=80.61  Aligned_cols=65  Identities=23%  Similarity=0.352  Sum_probs=52.9

Q ss_pred             CCCCC-CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc-----------------------hhhh--hccceeeCCCCCC
Q 048682            2 LGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTA-----------------------EQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p-~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~-----------------------~~~~--~~~~~~~~~~~~l   55 (75)
                      +|++| ++|++|||+.+|+++|++|||++|+|.+++..                       ...+  ..++++++++.++
T Consensus       181 lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el  260 (277)
T 3iru_A          181 LEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADL  260 (277)
T ss_dssp             HTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGT
T ss_pred             cCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHH
Confidence            68899 99999999999999999999999999998641                       1222  3589999999999


Q ss_pred             CHHHHHHHHHHH
Q 048682           56 RLKDLELLLQNL   67 (75)
Q Consensus        56 ~~~~l~~~~~~~   67 (75)
                       ++.|..+....
T Consensus       261 -~~~l~~~~~~~  271 (277)
T 3iru_A          261 -ETVITDVNRRL  271 (277)
T ss_dssp             -HHHHHHHHHHH
T ss_pred             -HHHHHHHHHHH
Confidence             67776655443

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.40  E-value=2.2e-13  Score=81.84  Aligned_cols=61  Identities=18%  Similarity=0.272  Sum_probs=50.8

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHH
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL   63 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   63 (75)
                      +|++|++|++|||+. +|+++|++||++++++.++.........++++++++.++ ...|.++
T Consensus       168 ~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el-~~~l~~~  229 (234)
T 3u26_A          168 AGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV-IKIVDEL  229 (234)
T ss_dssp             HTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHH-HHHHHHH
T ss_pred             cCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHH-HHHHHHH
Confidence            589999999999997 999999999999999998865544445789999998887 5555544

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.39  E-value=2e-13  Score=81.81  Aligned_cols=54  Identities=13%  Similarity=0.195  Sum_probs=47.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|++||+++|+|.++.......  ..++++++++.++
T Consensus       155 lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el  210 (226)
T 3mc1_A          155 LNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDEL  210 (226)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHH
T ss_pred             hCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHH
Confidence            68999999999999999999999999999999887655544  5789999987666

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.37  E-value=1.1e-12  Score=80.10  Aligned_cols=56  Identities=27%  Similarity=0.399  Sum_probs=48.9

Q ss_pred             CCCCCC--CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCC
Q 048682            1 RLGISE--KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR   56 (75)
Q Consensus         1 ~l~~~p--~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~   56 (75)
                      ++|++|  ++|++|||+.+|+++|++|||++|+|.++.........++++++++.++.
T Consensus       183 ~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~  240 (250)
T 3l5k_A          183 RFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQ  240 (250)
T ss_dssp             TSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCC
T ss_pred             HcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhh
Confidence            468887  99999999999999999999999999988765444467899999999984

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.37  E-value=4.7e-13  Score=80.76  Aligned_cols=54  Identities=20%  Similarity=0.359  Sum_probs=46.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|++||+++|+|.++......+  ..++++++++.++
T Consensus       173 lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el  228 (237)
T 4ex6_A          173 LGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAA  228 (237)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHH
T ss_pred             cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHH
Confidence            68999999999999999999999999999999887554443  3689999987766

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.36  E-value=4.2e-13  Score=80.56  Aligned_cols=59  Identities=19%  Similarity=0.116  Sum_probs=49.2

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHH
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE   61 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   61 (75)
                      +|++|++|++|||+. +|+++|+++|+.++++.++.........++++++++.++ .+.|.
T Consensus       168 ~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el-~~~l~  227 (230)
T 3vay_A          168 AKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQL-PEVLA  227 (230)
T ss_dssp             HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGH-HHHHH
T ss_pred             hCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHH-HHHHH
Confidence            588999999999998 999999999999999988765433345688999999888 55544

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.36  E-value=3.8e-13  Score=82.09  Aligned_cols=54  Identities=20%  Similarity=0.290  Sum_probs=45.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +|++|++|+|||||.+|+++|++||+++|++.++......+  ..++++++++.++
T Consensus       178 l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el  233 (240)
T 2hi0_A          178 LGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKL  233 (240)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHH
T ss_pred             cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHH
Confidence            68999999999999999999999999999998876543333  3578888887665

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.34  E-value=8.7e-13  Score=82.56  Aligned_cols=54  Identities=19%  Similarity=0.334  Sum_probs=42.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|+|||||..|+++|++|||++|++.+..........++.+++++.++
T Consensus       200 lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL  253 (253)
T 2g80_A          200 IGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL  253 (253)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             cCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence            689999999999999999999999999999977432211111267788888764

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.34  E-value=1.3e-12  Score=77.82  Aligned_cols=54  Identities=15%  Similarity=0.219  Sum_probs=46.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|++||+.++++.++.........++++++++.++
T Consensus       151 ~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el  204 (209)
T 2hdo_A          151 VNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI  204 (209)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred             cCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHH
Confidence            689999999999999999999999999999998765444443488999998887

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.34  E-value=1.4e-12  Score=79.27  Aligned_cols=58  Identities=22%  Similarity=0.312  Sum_probs=47.7

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhh---ccceeeCCCCCCCHHHH
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK---DAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~---~~~~~~~~~~~l~~~~l   60 (75)
                      +|++|++|++|||+. +|+++|++||+.++++.++........   .++++++++.++ ++.|
T Consensus       163 ~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el-~~~l  224 (241)
T 2hoq_A          163 FNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL-LEVL  224 (241)
T ss_dssp             HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHH-HHHH
T ss_pred             cCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHH-HHHH
Confidence            588999999999998 999999999999999987765443332   678999998877 4443

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.33  E-value=1.2e-12  Score=78.36  Aligned_cols=60  Identities=17%  Similarity=0.252  Sum_probs=47.4

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHH
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE   61 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   61 (75)
                      ++|++|++|++|||+. +|+++|++||+.++++.++.........++++++++.++ ...|.
T Consensus       170 ~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el-~~~l~  230 (235)
T 2om6_A          170 SFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANL-KDVIE  230 (235)
T ss_dssp             HTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGH-HHHHH
T ss_pred             HcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHH-HHHHH
Confidence            3789999999999999 999999999999999988743222223467889998887 44443

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.33  E-value=2.1e-12  Score=78.20  Aligned_cols=54  Identities=9%  Similarity=0.223  Sum_probs=47.9

Q ss_pred             CCCC-CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            2 LGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~-p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +|++ |++|++|||+.+|+++|++||+++|++.++......+  ..++++++++.++
T Consensus       179 ~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el  235 (240)
T 3sd7_A          179 CNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI  235 (240)
T ss_dssp             HTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred             cCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence            5788 9999999999999999999999999999887665544  6789999999887

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.33  E-value=2.5e-12  Score=77.19  Aligned_cols=58  Identities=14%  Similarity=0.139  Sum_probs=48.0

Q ss_pred             CCC-CCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHH
Q 048682            1 RLG-ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD   59 (75)
Q Consensus         1 ~l~-~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~   59 (75)
                      ++| ++|++|++|||+. +|+++|++||+++|++.++.........++++++++.++ .+.
T Consensus       170 ~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el-~~~  229 (238)
T 3ed5_A          170 RIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL-YHI  229 (238)
T ss_dssp             TSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGH-HHH
T ss_pred             HcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHH-HHH
Confidence            478 9999999999998 999999999999999988754433345689999999887 444

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.33  E-value=6.1e-13  Score=79.71  Aligned_cols=54  Identities=22%  Similarity=0.393  Sum_probs=46.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|+++|+++|+|.++......+  ..++++++++.++
T Consensus       160 l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el  215 (233)
T 3s6j_A          160 IGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDL  215 (233)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHH
T ss_pred             hCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHH
Confidence            68999999999999999999999999999999875544443  2488999987766

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.32  E-value=1.6e-12  Score=78.56  Aligned_cols=59  Identities=17%  Similarity=0.221  Sum_probs=46.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEc----CCCCchhh---hhccceeeCCCCCCCHHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITY----TSSTAEQD---FKDAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~----~~~~~~~~---~~~~~~~~~~~~~l~~~~l   60 (75)
                      ++|++|++|++|||+.+|+++|++||+.++++.    ++......   ...++++++++.++ ...|
T Consensus       181 ~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el-~~~l  246 (254)
T 3umg_A          181 VLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDL-AAQL  246 (254)
T ss_dssp             HTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHH-HHHH
T ss_pred             HcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHH-HHHh
Confidence            378999999999999999999999999999998    55433332   24678999998776 4443

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.31  E-value=1.6e-12  Score=78.87  Aligned_cols=58  Identities=21%  Similarity=0.247  Sum_probs=47.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeE-EEEcCCCCchhhh-hccceeeCCCCCCCHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~-i~v~~~~~~~~~~-~~~~~~~~~~~~l~~~~l   60 (75)
                      ++++|++|+||||+.+|+++|++|||++ |+|.++....... ..++++++++.++ ++.+
T Consensus       144 lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el-~~~l  203 (211)
T 2gmw_A          144 LHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL-PQAI  203 (211)
T ss_dssp             HTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH-HHHH
T ss_pred             cCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHH-HHHH
Confidence            5789999999999999999999999999 9999886543322 4578999998887 4444

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.31  E-value=1.2e-12  Score=81.67  Aligned_cols=57  Identities=21%  Similarity=0.260  Sum_probs=45.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch-hh-hhccceeeCCCCCCCHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE-QD-FKDAIAIYPDLSNVRLK   58 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~-~~-~~~~~~~~~~~~~l~~~   58 (75)
                      +|++|++|+|||||.+|+++|++|||++|+|.++.... .. ...++++++++.++.++
T Consensus       200 lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~~~  258 (261)
T 1yns_A          200 IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELYLP  258 (261)
T ss_dssp             HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCBC-
T ss_pred             hCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhCcC
Confidence            58899999999999999999999999999997654322 11 24578899999988543

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.31  E-value=2e-12  Score=78.20  Aligned_cols=57  Identities=19%  Similarity=0.221  Sum_probs=47.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l   60 (75)
                      +|++|++|++||||.+|+++|++||+++|++.++...... ..++++++++.++ +..+
T Consensus       152 ~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el-~~~l  208 (222)
T 2nyv_A          152 LGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDL-VKLM  208 (222)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHH-HHHH
T ss_pred             hCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHH-HHHH
Confidence            5789999999999999999999999999999887643333 5678899998877 4443

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.31  E-value=2.4e-12  Score=78.76  Aligned_cols=55  Identities=9%  Similarity=0.167  Sum_probs=45.0

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCc-hhh---hhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA-EQD---FKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~-~~~---~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+||||+. +|+++|++||+++|+|.++... .+.   ...++++++++.++
T Consensus       191 ~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l  250 (259)
T 2ho4_A          191 DADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHA  250 (259)
T ss_dssp             GGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHH
T ss_pred             HcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHH
Confidence            3689999999999998 9999999999999999988432 221   24578888888776

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.30  E-value=2.1e-12  Score=77.33  Aligned_cols=62  Identities=19%  Similarity=0.232  Sum_probs=47.9

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCC-----CCc--hh-hhhccceeeCCCCCCCHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTS-----STA--EQ-DFKDAIAIYPDLSNVRLKDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~-----~~~--~~-~~~~~~~~~~~~~~l~~~~l~~~~   64 (75)
                      +|++|++|++|||+. +|+++|++||+.++++..+     +..  .. ....++++++++.++ ++.|.+++
T Consensus       168 lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el-~~~l~~~l  238 (240)
T 3smv_A          168 AGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM-AEAHKQAL  238 (240)
T ss_dssp             TTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHH-HHHHHHHH
T ss_pred             cCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHH-HHHHHHHh
Confidence            689999999999996 9999999999999999754     111  11 225689999998887 56665543

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.30  E-value=2.7e-12  Score=76.41  Aligned_cols=52  Identities=15%  Similarity=0.082  Sum_probs=43.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|+++|+++|++.++....  ...++++++++.++
T Consensus       140 ~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~--~~~ad~v~~~~~el  191 (205)
T 3m9l_A          140 WDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPW--PELTDWHARDCAQL  191 (205)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSC--GGGCSEECSSHHHH
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcc--cccCCEEeCCHHHH
Confidence            68999999999999999999999999999998876432  23578888887665

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.29  E-value=2.1e-12  Score=78.43  Aligned_cols=54  Identities=20%  Similarity=0.279  Sum_probs=44.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEc----CCCCchhhh---hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITY----TSSTAEQDF---KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~----~~~~~~~~~---~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|++||+.++++.    ++......+   ..++++++++.++
T Consensus       186 lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el  246 (254)
T 3umc_A          186 LDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDL  246 (254)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHH
T ss_pred             cCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHH
Confidence            68999999999999999999999999999998    555333332   4678999998776

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.29  E-value=3.5e-12  Score=76.79  Aligned_cols=54  Identities=17%  Similarity=0.378  Sum_probs=46.6

Q ss_pred             CCCCCCcEEEEecC-HHhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs-~~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+ .+|+++|+.||+.+++|.++....+.+    ..++++++++.++
T Consensus       189 lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el  247 (250)
T 2c4n_A          189 MQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI  247 (250)
T ss_dssp             HTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred             cCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence            68999999999999 699999999999999999887654443    3688999998877

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.29  E-value=3.5e-12  Score=78.10  Aligned_cols=59  Identities=25%  Similarity=0.318  Sum_probs=47.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc----hhhh--hccceeeCCCCCCCHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA----EQDF--KDAIAIYPDLSNVRLKDLE   61 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~----~~~~--~~~~~~~~~~~~l~~~~l~   61 (75)
                      +|++|++|++|||+.+|+++|++||+.+|++.++...    ...+  ..++++++++.++ .+.|.
T Consensus       181 lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el-~~~l~  245 (259)
T 4eek_A          181 LGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAEL-RAALA  245 (259)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHH-HHHHH
T ss_pred             cCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHH-HHHHH
Confidence            6899999999999999999999999999999876443    2233  4588999998776 44443

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.29  E-value=1.9e-12  Score=78.54  Aligned_cols=60  Identities=17%  Similarity=0.129  Sum_probs=47.8

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhcc-ceeeCCCCCCCHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDA-IAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~   62 (75)
                      +|++|++|++|||+.+|+++|+++|+.++++.++.........+ +++++++.++ +..|.+
T Consensus       174 ~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el-~~~l~~  234 (240)
T 2no4_A          174 LGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL-WPLLAK  234 (240)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGH-HHHHCC
T ss_pred             cCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHH-HHHHHH
Confidence            58899999999999999999999999999998876421112456 8899999887 455443

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.29  E-value=5.1e-12  Score=75.03  Aligned_cols=60  Identities=22%  Similarity=0.248  Sum_probs=47.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhh--ccceeeCCCCCCCHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK--DAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~   62 (75)
                      +|++|++|++|||+.+|+++|+.+|+.++++.++......+.  .++++++++.++ .+.++.
T Consensus       158 ~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el-~~~l~~  219 (225)
T 3d6j_A          158 LKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQL-ISVPED  219 (225)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGG-C-----
T ss_pred             hCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHH-HHhhhh
Confidence            689999999999999999999999999999988765444432  378999999888 455444

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.28  E-value=3.4e-12  Score=79.17  Aligned_cols=55  Identities=15%  Similarity=0.255  Sum_probs=48.1

Q ss_pred             CCCCCCcEEEEecC-HHhHHHHHHcCCeEEEEcCCCCchhhhh----ccceeeCCCCCCC
Q 048682            2 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVR   56 (75)
Q Consensus         2 l~~~p~~~l~igDs-~~di~aA~~AG~~~i~v~~~~~~~~~~~----~~~~~~~~~~~l~   56 (75)
                      +|++|++|+||||+ .+|+++|++||+++|+|.++......+.    .++++++++.++.
T Consensus       195 ~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~  254 (264)
T 3epr_A          195 LNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT  254 (264)
T ss_dssp             HTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred             hCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence            68899999999999 6999999999999999999886655443    6899999998874

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.28  E-value=2.4e-12  Score=79.43  Aligned_cols=55  Identities=15%  Similarity=0.307  Sum_probs=46.7

Q ss_pred             CCCCCCcEEEEecC-HHhHHHHHHcCCeEEEEcCCCCchhhhh----ccceeeCCCCCCC
Q 048682            2 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVR   56 (75)
Q Consensus         2 l~~~p~~~l~igDs-~~di~aA~~AG~~~i~v~~~~~~~~~~~----~~~~~~~~~~~l~   56 (75)
                      +|++|++|+||||+ .+|+++|+++||++|+|.++......+.    .++++++++.++.
T Consensus       196 ~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~  255 (264)
T 1yv9_A          196 LGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT  255 (264)
T ss_dssp             HCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred             cCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence            58899999999999 5999999999999999998875443332    5899999998874

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.28  E-value=4e-12  Score=74.89  Aligned_cols=53  Identities=21%  Similarity=0.282  Sum_probs=45.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|+++|++++++.++..... ...++++++++.++
T Consensus       158 ~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~-~~~a~~~~~~~~el  210 (214)
T 3e58_A          158 LNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMD-QSAAKGLLDSLTDV  210 (214)
T ss_dssp             HTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCC-CTTSSEEESSGGGG
T ss_pred             cCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccch-hccHHHHHHHHHHH
Confidence            588999999999999999999999999999987643322 25689999999887

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.28  E-value=1.1e-11  Score=73.63  Aligned_cols=60  Identities=28%  Similarity=0.395  Sum_probs=49.7

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL   64 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~   64 (75)
                      ++|++|++|++|||+.+|+++|++||+.++++...    .....++++++++.++.+..+.+.+
T Consensus       157 ~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~----~~~~~a~~v~~~~~el~~~~~~~~~  216 (221)
T 2wf7_A          157 AVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP----EDLGDDIVIVPDTSHYTLEFLKEVW  216 (221)
T ss_dssp             HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH----HHHCSSSEEESSGGGCCHHHHHHHH
T ss_pred             HcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCH----HHhccccchhcCHHhCCHHHHHHHH
Confidence            36899999999999999999999999999988431    2334788999999999887766543

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.28  E-value=4.7e-12  Score=79.14  Aligned_cols=53  Identities=19%  Similarity=0.241  Sum_probs=45.7

Q ss_pred             CCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh--------hccceeeCCCCCC
Q 048682            3 GISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF--------KDAIAIYPDLSNV   55 (75)
Q Consensus         3 ~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~--------~~~~~~~~~~~~l   55 (75)
                      |++|++|+||||++ +|+++|+++||++|+|.++......+        ..++++++++.++
T Consensus       222 ~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          222 EISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE  283 (284)
T ss_dssp             CCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred             CCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence            88999999999995 99999999999999999887644332        3579999999886

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.27  E-value=2.7e-12  Score=77.11  Aligned_cols=58  Identities=16%  Similarity=0.167  Sum_probs=47.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh-hccceeeCCCCCCCHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~-~~~~~~~~~~~~l~~~~l   60 (75)
                      +|++|++|++|||+.+|+++|+++|+.++++.++....... ..++++++++.++ .+.|
T Consensus       168 ~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el-~~~l  226 (233)
T 3umb_A          168 FGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDL-LQFV  226 (233)
T ss_dssp             HTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHH-HHHH
T ss_pred             hCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHH-HHHH
Confidence            58899999999999999999999999999998876544333 4588999988776 4443

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.26  E-value=1.2e-11  Score=81.78  Aligned_cols=56  Identities=21%  Similarity=0.299  Sum_probs=46.0

Q ss_pred             CCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc---hhhh--hccceeeCCCCCCCHHHH
Q 048682            4 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA---EQDF--KDAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~---~~~~--~~~~~~~~~~~~l~~~~l   60 (75)
                      ++|++|+|||||.+|+++|++|||++|+|.++...   ...+  ..++++++++.++ ...+
T Consensus       313 v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL-~~~l  373 (384)
T 1qyi_A          313 VNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL-RGVL  373 (384)
T ss_dssp             SCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGH-HHHH
T ss_pred             CCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHH-HHHH
Confidence            88999999999999999999999999999987642   2222  3688999999887 4443

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.26  E-value=2.9e-12  Score=79.24  Aligned_cols=54  Identities=17%  Similarity=0.431  Sum_probs=45.4

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhh----ccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~----~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+. +|+++|+.||+.+++|.++......+.    .++++++++.++
T Consensus       208 lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el  266 (271)
T 1vjr_A          208 FGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL  266 (271)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred             hCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence            689999999999995 999999999999999999876543332    578888887665

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.25  E-value=1.1e-11  Score=73.55  Aligned_cols=58  Identities=28%  Similarity=0.428  Sum_probs=48.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh-hhhccceeeCCCCCCCHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-DFKDAIAIYPDLSNVRLKD   59 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~~   59 (75)
                      +|++|++|++|||+.+|+++|+.||+.++++.++..... ....++++++++.++....
T Consensus       163 ~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~~  221 (226)
T 1te2_A          163 LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKD  221 (226)
T ss_dssp             HTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHH
T ss_pred             cCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHHH
Confidence            588999999999999999999999999999988764332 2356899999999985443

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.25  E-value=5.7e-12  Score=79.77  Aligned_cols=58  Identities=19%  Similarity=0.268  Sum_probs=48.4

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh----------hccceeeCCCCCCCHHHH
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF----------KDAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~----------~~~~~~~~~~~~l~~~~l   60 (75)
                      +|++|++|+||||+. +|+++|++||+++++|.++......+          ..++++++++.++ +..+
T Consensus       228 lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el-~~~l  296 (306)
T 2oyc_A          228 FSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL-TEGL  296 (306)
T ss_dssp             SCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGG-GGGC
T ss_pred             cCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHH-HHHH
Confidence            789999999999996 99999999999999999987654322          3578999999888 4443

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.24  E-value=1.2e-11  Score=75.85  Aligned_cols=60  Identities=22%  Similarity=0.267  Sum_probs=48.0

Q ss_pred             CCCCC-CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc-----------------------hhhh--hccceeeCCCCCC
Q 048682            2 LGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTA-----------------------EQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p-~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~-----------------------~~~~--~~~~~~~~~~~~l   55 (75)
                      +|++| ++|++|||+.+|+++|+.||+.+|++.++...                       ...+  ..++++++++.++
T Consensus       173 lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el  252 (267)
T 1swv_A          173 LGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQEL  252 (267)
T ss_dssp             HTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGH
T ss_pred             hCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHH
Confidence            57888 99999999999999999999999999988652                       1222  3488999999887


Q ss_pred             CHHHHHH
Q 048682           56 RLKDLEL   62 (75)
Q Consensus        56 ~~~~l~~   62 (75)
                       ...|..
T Consensus       253 -~~~l~~  258 (267)
T 1swv_A          253 -ESVMEH  258 (267)
T ss_dssp             -HHHHHH
T ss_pred             -HHHHHH
Confidence             455443

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.24  E-value=1.2e-12  Score=78.43  Aligned_cols=54  Identities=15%  Similarity=0.102  Sum_probs=45.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh-hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~-~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|+++|+.++++.++....... ..++++++++.++
T Consensus       165 ~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  219 (230)
T 3um9_A          165 LHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVL  219 (230)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHH
T ss_pred             hCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHH
Confidence            58899999999999999999999999999998875443332 4678899988766

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.24  E-value=2.4e-12  Score=79.58  Aligned_cols=54  Identities=24%  Similarity=0.426  Sum_probs=46.1

Q ss_pred             CCCCCCcEEEEecC-HHhHHHHHHcCCeEEEEcCCCCchhhhh--------ccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK--------DAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs-~~di~aA~~AG~~~i~v~~~~~~~~~~~--------~~~~~~~~~~~l   55 (75)
                      +|++|++|+||||+ .+|+++|++||+++|+|.++......+.        .++++++++.++
T Consensus       200 ~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el  262 (268)
T 3qgm_A          200 LGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM  262 (268)
T ss_dssp             HTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred             hCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence            58899999999999 5999999999999999999876544433        688999988766

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.23  E-value=7.1e-12  Score=74.36  Aligned_cols=50  Identities=18%  Similarity=0.298  Sum_probs=40.8

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh-hccceeeCCCCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNV   55 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~-~~~~~~~~~~~~l   55 (75)
                      |++|+||||+.+|+++|++|||+++++.++....... ..++++++++.++
T Consensus       143 ~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  193 (201)
T 2w43_A          143 AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKEL  193 (201)
T ss_dssp             CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred             CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHH
Confidence            8999999999999999999999999998865432222 3578888887666

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.23  E-value=5.6e-12  Score=77.01  Aligned_cols=65  Identities=12%  Similarity=0.084  Sum_probs=49.1

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchh---h---hhccce-eeCCCCCCCHHHHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQ---D---FKDAIA-IYPDLSNVRLKDLELLLQNL   67 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~---~---~~~~~~-~~~~~~~l~~~~l~~~~~~~   67 (75)
                      +|++|++|++|||+. +|+++|++||+.+|++.++.....   .   ...+++ +++++.++ .+.|..+.+++
T Consensus       175 l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el-~~~l~~~~~~~  247 (251)
T 2pke_A          175 FDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW-PAAVRALDAQA  247 (251)
T ss_dssp             HTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGH-HHHHHHHHHHH
T ss_pred             hCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHH-HHHHHHhChhh
Confidence            588999999999999 999999999999999987653211   1   235787 89999998 66666655443

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.23  E-value=6.5e-12  Score=74.86  Aligned_cols=54  Identities=20%  Similarity=0.357  Sum_probs=44.2

Q ss_pred             CCCCCCcEEEEecC-HHhHHHHHHcCCeEEEEcCCCCch--hhh--hccceeeC--CCCCC
Q 048682            2 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAE--QDF--KDAIAIYP--DLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs-~~di~aA~~AG~~~i~v~~~~~~~--~~~--~~~~~~~~--~~~~l   55 (75)
                      +|++|++|+||||+ .+|+++|+++||++|++.++....  ..+  ..++++++  ++.++
T Consensus       110 ~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l  170 (189)
T 3ib6_A          110 LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV  170 (189)
T ss_dssp             HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGH
T ss_pred             cCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhH
Confidence            57899999999999 799999999999999998876422  222  26788888  87776

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.23  E-value=1.2e-11  Score=76.87  Aligned_cols=59  Identities=22%  Similarity=0.291  Sum_probs=45.8

Q ss_pred             CCCCCCcEEEEecC-HHhHHHHHHcCC-eEEEEcCCCCchh-hhhccceeeCCCCCCCHHHHH
Q 048682            2 LGISEKDCLVVEDS-VIGLQAATRAGM-ACVITYTSSTAEQ-DFKDAIAIYPDLSNVRLKDLE   61 (75)
Q Consensus         2 l~~~p~~~l~igDs-~~di~aA~~AG~-~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~   61 (75)
                      +|++|++|+||||| .+|+++|++||| .+|++.++..... ....++++++++.++ ...+.
T Consensus       189 ~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el-~~~l~  250 (260)
T 2gfh_A          189 LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL-PALLQ  250 (260)
T ss_dssp             HTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH-HHHHH
T ss_pred             cCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHH-HHHHH
Confidence            58899999999996 899999999999 8999976543211 224578899998887 44443

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.22  E-value=6.8e-12  Score=75.25  Aligned_cols=54  Identities=13%  Similarity=0.067  Sum_probs=45.7

Q ss_pred             CCCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|++|||+. +|+++|+++|+.++++.++... .....++++++++.++
T Consensus       174 ~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~-~~~~~~d~vi~sl~e~  228 (240)
T 3qnm_A          174 ATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERT-VFPFQPTYHIHSLKEL  228 (240)
T ss_dssp             HTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCC-CCSSCCSEEESSTHHH
T ss_pred             HcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCC-CcCCCCceEECCHHHH
Confidence            3689999999999996 9999999999999999887642 2235689999998776

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.22  E-value=8.2e-12  Score=76.56  Aligned_cols=60  Identities=15%  Similarity=0.206  Sum_probs=47.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcC-----------------------CCCchhh-hhccceeeCCCCCCCH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYT-----------------------SSTAEQD-FKDAIAIYPDLSNVRL   57 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~-----------------------~~~~~~~-~~~~~~~~~~~~~l~~   57 (75)
                      +|++|++|+||||+.+|+++|+++|+.++++.+                       +...... ...++++++++.++ +
T Consensus       160 ~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el-~  238 (253)
T 1qq5_A          160 LGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDL-P  238 (253)
T ss_dssp             HCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGH-H
T ss_pred             cCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHH-H
Confidence            588999999999999999999999999999987                       2221111 24578999999888 5


Q ss_pred             HHHHH
Q 048682           58 KDLEL   62 (75)
Q Consensus        58 ~~l~~   62 (75)
                      ..+.+
T Consensus       239 ~~l~~  243 (253)
T 1qq5_A          239 RLVRG  243 (253)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55544

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.22  E-value=1.4e-11  Score=73.68  Aligned_cols=61  Identities=25%  Similarity=0.373  Sum_probs=48.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc----hhhh-h-ccceeeCCCCCCCHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA----EQDF-K-DAIAIYPDLSNVRLKDLELL   63 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~----~~~~-~-~~~~~~~~~~~l~~~~l~~~   63 (75)
                      +|++|++|++|||+.+|+++|+++|+.+|++.++...    ...+ . .++++++++.++ ...|..+
T Consensus       156 l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el-~~~l~~~  222 (229)
T 2fdr_A          156 FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL-PAVIAAM  222 (229)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH-HHHHHHH
T ss_pred             cCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHH-HHHHHHh
Confidence            5889999999999999999999999999999877542    1122 2 388999999887 5555544

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.21  E-value=1.2e-11  Score=76.55  Aligned_cols=54  Identities=22%  Similarity=0.330  Sum_probs=44.0

Q ss_pred             CCCCCCcEEEEecC-HHhHHHHHHcCCeEEEEcCCCCchhhhh----ccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs-~~di~aA~~AG~~~i~v~~~~~~~~~~~----~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+ .+|+++|+.||+.++++.++......+.    .++++++++.++
T Consensus       196 lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el  254 (266)
T 3pdw_A          196 LGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEW  254 (266)
T ss_dssp             HTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGG
T ss_pred             cCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHH
Confidence            68999999999999 7999999999999999999876554443    489999999888

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.21  E-value=1.1e-12  Score=79.68  Aligned_cols=54  Identities=22%  Similarity=0.370  Sum_probs=41.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeE-EEEcCCCCchhhh-hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~-i~v~~~~~~~~~~-~~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+.+|+++|+++||++ |+|.++....... ..++++++++.++
T Consensus       150 ~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el  205 (218)
T 2o2x_A          150 LALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDL  205 (218)
T ss_dssp             HTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHH
T ss_pred             cCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHH
Confidence            5789999999999999999999999999 9999876433221 2345555554433

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.21  E-value=3.3e-12  Score=76.94  Aligned_cols=54  Identities=15%  Similarity=0.153  Sum_probs=44.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh-hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~-~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|+++|+.++++.++....... ..++++++++.++
T Consensus       164 ~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  218 (232)
T 1zrn_A          164 LGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV  218 (232)
T ss_dssp             HTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             cCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHH
Confidence            58899999999999999999999999999998765432222 4578888887766

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.21  E-value=1.4e-11  Score=74.16  Aligned_cols=56  Identities=16%  Similarity=0.245  Sum_probs=43.0

Q ss_pred             CCCCCC-cEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHH
Q 048682            2 LGISEK-DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL   63 (75)
Q Consensus         2 l~~~p~-~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   63 (75)
                      +|++|+ +|++|||+.+|+++|++||+.+|++.++..     ..++++++++.++ .+.|.++
T Consensus       172 lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el-~~~l~~~  228 (231)
T 3kzx_A          172 INIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDI-RNFICQL  228 (231)
T ss_dssp             HTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHH-HHHHHHH
T ss_pred             cCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHH-HHHHHHH
Confidence            588998 999999999999999999999999955432     3467788888777 5555543

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.20  E-value=1.6e-11  Score=75.02  Aligned_cols=54  Identities=17%  Similarity=0.308  Sum_probs=44.2

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCc-hhhh---hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA-EQDF---KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~-~~~~---~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+. +|+++|+.||+.+++|.++... ....   ..++++++++.++
T Consensus       203 lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el  261 (271)
T 2x4d_A          203 IGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEA  261 (271)
T ss_dssp             HTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHH
T ss_pred             hCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHH
Confidence            589999999999998 9999999999999999987432 2222   3478889887766

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.20  E-value=3.1e-12  Score=76.24  Aligned_cols=54  Identities=19%  Similarity=0.217  Sum_probs=42.3

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCC----Cchhhh-hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSS----TAEQDF-KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~----~~~~~~-~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+. +|+++|++||+.++++..+.    ...... ..++++++++.++
T Consensus       170 lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el  229 (234)
T 3ddh_A          170 LQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL  229 (234)
T ss_dssp             HTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred             hCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHH
Confidence            689999999999997 99999999999999995443    222222 3348899998887

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.20  E-value=2e-11  Score=75.79  Aligned_cols=52  Identities=17%  Similarity=0.348  Sum_probs=44.5

Q ss_pred             CCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhh----ccceeeCCCCCC
Q 048682            4 ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNV   55 (75)
Q Consensus         4 ~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~----~~~~~~~~~~~l   55 (75)
                      ++|++|+||||+. +|+++|+++||++|+|.++......+.    .++++++++.++
T Consensus       200 ~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el  256 (263)
T 1zjj_A          200 FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYEL  256 (263)
T ss_dssp             STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGG
T ss_pred             CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence            5789999999996 999999999999999998876544332    588999999888

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.20  E-value=2.2e-11  Score=75.82  Aligned_cols=55  Identities=24%  Similarity=0.228  Sum_probs=45.5

Q ss_pred             CCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh-hccceeeCCCCCCCHHH
Q 048682            5 SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNVRLKD   59 (75)
Q Consensus         5 ~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~-~~~~~~~~~~~~l~~~~   59 (75)
                      +|++|++|||+.+|+++|++||+.+++|.++....... ..++++++++.++.++.
T Consensus       193 ~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~~  248 (275)
T 2qlt_A          193 SKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGE  248 (275)
T ss_dssp             GGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEECC
T ss_pred             CcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChhh
Confidence            99999999999999999999999999999876533222 25889999998886543

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.19  E-value=2.1e-11  Score=74.66  Aligned_cols=54  Identities=26%  Similarity=0.237  Sum_probs=45.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh--hhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ--DFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~--~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|+||||+.+|+.+|++||+.+|++.+++....  ....++++++++.++
T Consensus       183 ~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el  238 (243)
T 2hsz_A          183 FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI  238 (243)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             hCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHH
Confidence            578999999999999999999999999999998764322  235678999998887

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.16  E-value=1.7e-11  Score=74.48  Aligned_cols=58  Identities=10%  Similarity=0.148  Sum_probs=45.7

Q ss_pred             CCCCCcEEEEecCHH---hHHHHHHcCCeEEEEcCCCC--chhhh--h-ccceeeCCCCCCCHHHHH
Q 048682            3 GISEKDCLVVEDSVI---GLQAATRAGMACVITYTSST--AEQDF--K-DAIAIYPDLSNVRLKDLE   61 (75)
Q Consensus         3 ~~~p~~~l~igDs~~---di~aA~~AG~~~i~v~~~~~--~~~~~--~-~~~~~~~~~~~l~~~~l~   61 (75)
                      +++|++|+|||||.+   |+++|++|||++|++.++..  ....+  . .++++++++.++ ...|.
T Consensus       158 ~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el-~~~l~  223 (231)
T 2p11_A          158 CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL-VEMDA  223 (231)
T ss_dssp             HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGG-GGCGG
T ss_pred             cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHH-HHHHH
Confidence            478999999999998   99999999999999998743  22222  2 378999999887 44443

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.14  E-value=2.6e-11  Score=70.88  Aligned_cols=48  Identities=10%  Similarity=0.235  Sum_probs=42.8

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|++|||+.+|+++|+.+|+.+|++.++. .     .++++++++.++
T Consensus       153 ~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el  200 (207)
T 2go7_A          153 YQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADI  200 (207)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHH
T ss_pred             hCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHH
Confidence            58899999999999999999999999999998776 3     478889988876

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.12  E-value=2e-11  Score=75.82  Aligned_cols=58  Identities=14%  Similarity=0.339  Sum_probs=44.3

Q ss_pred             CCCCC-CcEEEEecCHHhHHHHHHcCC-eEEEEcCCCCchh--hhhccceeeCCCCCCCHHHH
Q 048682            2 LGISE-KDCLVVEDSVIGLQAATRAGM-ACVITYTSSTAEQ--DFKDAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         2 l~~~p-~~~l~igDs~~di~aA~~AG~-~~i~v~~~~~~~~--~~~~~~~~~~~~~~l~~~~l   60 (75)
                      +|++| ++|++|||+.+|+++|++||| .++++..+.....  ....++++++++.++ .+.|
T Consensus       217 lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el-~~~l  278 (282)
T 3nuq_A          217 SGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILEL-PHVV  278 (282)
T ss_dssp             HTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGG-GGTS
T ss_pred             cCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHH-HHHh
Confidence            58898 999999999999999999999 6677766553321  124678999999988 4443

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.04  E-value=9.7e-11  Score=69.19  Aligned_cols=53  Identities=11%  Similarity=0.182  Sum_probs=42.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhh--hhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD--FKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~--~~~~~~~~~~~~~l   55 (75)
                      +|++|++|++||||.+|++++ ++||.++++.++......  ...++++++++.++
T Consensus       160 ~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el  214 (219)
T 3kd3_A          160 KGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL  214 (219)
T ss_dssp             GGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred             hCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence            478999999999999999998 689998888765543222  24688999988766

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.00  E-value=1.9e-10  Score=68.30  Aligned_cols=37  Identities=14%  Similarity=0.311  Sum_probs=34.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA   38 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~   38 (75)
                      +|++|++|+||||+.+|+++|+++||++|++.+++..
T Consensus       133 ~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~  169 (187)
T 2wm8_A          133 TGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNL  169 (187)
T ss_dssp             HCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCH
T ss_pred             cCCChHHEEEEeCCccChHHHHHcCCEEEEECCCCCh
Confidence            5889999999999999999999999999999988753

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=98.99  E-value=3.4e-10  Score=74.01  Aligned_cols=51  Identities=18%  Similarity=0.135  Sum_probs=42.2

Q ss_pred             CCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhh---hhccceeeCCCCCC
Q 048682            5 SEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQD---FKDAIAIYPDLSNV   55 (75)
Q Consensus         5 ~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~---~~~~~~~~~~~~~l   55 (75)
                      ++++|+||||+. +||++|++|||++|+|.++......   ...++++++++.++
T Consensus       289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~pd~vi~~l~el  343 (352)
T 3kc2_A          289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDLKECKPTLIVNDVFDA  343 (352)
T ss_dssp             TSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTTCCCTTCCCSEECSSHHHH
T ss_pred             CcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCcccccccCCCCEEECCHHHH
Confidence            679999999999 6999999999999999987754322   24578888888776

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.99  E-value=2.6e-10  Score=68.80  Aligned_cols=38  Identities=21%  Similarity=0.331  Sum_probs=34.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE   39 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~   39 (75)
                      +|++|++|++|||+.+|+++|++||+.+|++.++....
T Consensus       186 ~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k  223 (229)
T 4dcc_A          186 AGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWS  223 (229)
T ss_dssp             HTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred             cCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence            58899999999999999999999999999998776443

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.97  E-value=4.9e-10  Score=66.35  Aligned_cols=36  Identities=14%  Similarity=0.220  Sum_probs=31.3

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +++++|++|+||||+.+|+++|+++||++|++.++.
T Consensus       128 ~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~  163 (176)
T 2fpr_A          128 EQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  163 (176)
T ss_dssp             ---CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             HcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence            368899999999999999999999999999998764

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.93  E-value=5.6e-10  Score=62.35  Aligned_cols=35  Identities=26%  Similarity=0.564  Sum_probs=32.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      ++++|++|+||||+.+|+++|+++|+.+|++.++.
T Consensus        87 ~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~  121 (137)
T 2pr7_A           87 IDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFD  121 (137)
T ss_dssp             TTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHH
T ss_pred             cCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChH
Confidence            68899999999999999999999999999987654

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=98.92  E-value=2.2e-10  Score=67.60  Aligned_cols=36  Identities=22%  Similarity=0.374  Sum_probs=33.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST   37 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~   37 (75)
                      +|++|++|++|||+.+|+++|+++|++++++.++..
T Consensus       154 ~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~  189 (200)
T 3cnh_A          154 AQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQ  189 (200)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred             cCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence            578999999999999999999999999999987653

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=98.91  E-value=6.8e-10  Score=65.85  Aligned_cols=36  Identities=17%  Similarity=0.320  Sum_probs=32.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST   37 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~   37 (75)
                      +|++|++|++|||+.+|+++|+++|+.++++.++..
T Consensus       163 ~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~  198 (211)
T 2i6x_A          163 SGMKPEETLFIDDGPANVATAERLGFHTYCPDNGEN  198 (211)
T ss_dssp             HCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred             hCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHH
Confidence            588999999999999999999999999999877653

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.90  E-value=3e-10  Score=68.27  Aligned_cols=48  Identities=15%  Similarity=0.115  Sum_probs=38.0

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|+|||||.+|+++|++||+ +|++............++++++++.++
T Consensus       172 ~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el  219 (225)
T 1nnl_A          172 KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL  219 (225)
T ss_dssp             SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred             CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHH
Confidence            789999999999999999999 888754332222234678999999887

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=98.87  E-value=7.2e-10  Score=64.88  Aligned_cols=44  Identities=18%  Similarity=0.153  Sum_probs=36.1

Q ss_pred             CCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            5 SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         5 ~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++||||.+|+++|++||+. |++.++..      .++++++++.++
T Consensus       149 ~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~------~ad~v~~~~~el  192 (201)
T 4ap9_A          149 RDGFILAMGDGYADAKMFERADMG-IAVGREIP------GADLLVKDLKEL  192 (201)
T ss_dssp             TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT------TCSEEESSHHHH
T ss_pred             CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc------cccEEEccHHHH
Confidence            689999999999999999999997 55654432      678888887665

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=98.86  E-value=1.2e-09  Score=64.40  Aligned_cols=36  Identities=19%  Similarity=0.406  Sum_probs=32.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST   37 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~   37 (75)
                      +|++|++|++|||+.+|+++|+++|++++++.++..
T Consensus       161 ~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~  196 (206)
T 2b0c_A          161 EGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT  196 (206)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred             cCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence            588999999999999999999999999999987653

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.86  E-value=1.9e-09  Score=63.46  Aligned_cols=50  Identities=18%  Similarity=0.165  Sum_probs=38.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCC--CCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD--LSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~l   55 (75)
                      +|++|++|++||||.+|+++|++||+.+ ++. +  .......+++++++  +.++
T Consensus       155 lgi~~~~~~~iGD~~~Di~~~~~ag~~~-~~~-~--~~~~~~~a~~v~~~~~~~~l  206 (211)
T 1l7m_A          155 EGINLEDTVAVGDGANDISMFKKAGLKI-AFC-A--KPILKEKADICIEKRDLREI  206 (211)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHCSEEE-EES-C--CHHHHTTCSEEECSSCGGGG
T ss_pred             cCCCHHHEEEEecChhHHHHHHHCCCEE-EEC-C--CHHHHhhcceeecchhHHHH
Confidence            5889999999999999999999999974 443 2  12223457888887  7766

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.83  E-value=7.7e-09  Score=59.78  Aligned_cols=60  Identities=15%  Similarity=0.211  Sum_probs=43.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCH--HHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL--KDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~   64 (75)
                      ++++|++|+||||+.+|+.+|+++|+.++ +.++  .......++++++++.+-..  +.++.++
T Consensus        96 ~~~~~~~~~~vGD~~~Di~~a~~ag~~~~-~~~~--~~~~~~~a~~v~~~~~~~g~~~~~~~~~~  157 (162)
T 2p9j_A           96 YSLKDEEIGFIGDDVVDIEVMKKVGFPVA-VRNA--VEEVRKVAVYITQRNGGEGALREVAELIH  157 (162)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTS--CHHHHHHCSEECSSCSSSSHHHHHHHHHH
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHCCCeEE-ecCc--cHHHHhhCCEEecCCCCCcHHHHHHHHHH
Confidence            68899999999999999999999999866 3333  22223458899999887532  3444443

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.81  E-value=6.8e-11  Score=70.44  Aligned_cols=55  Identities=9%  Similarity=0.106  Sum_probs=41.7

Q ss_pred             CCCCCCCcEEEEecCHHh----HHHHH-HcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIG----LQAAT-RAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~d----i~aA~-~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+|||||..|    +++|+ ++||++|++.+++.....+......++++.+.
T Consensus       125 ~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~  184 (193)
T 2i7d_A          125 RIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDN  184 (193)
T ss_dssp             TEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSC
T ss_pred             HcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHH
Confidence            367899999999999999    99999 99999999987654322222233468888554

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.80  E-value=9.6e-11  Score=70.06  Aligned_cols=53  Identities=9%  Similarity=0.150  Sum_probs=41.9

Q ss_pred             CCCCCCcEEEEecCHHh----HHHHH-HcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIG----LQAAT-RAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~d----i~aA~-~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      ++++|++|+|||||..|    +++|+ +|||++|++.+++.....+......++++.+
T Consensus       128 l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~  185 (197)
T 1q92_A          128 IVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWAD  185 (197)
T ss_dssp             EEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTS
T ss_pred             hccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHH
Confidence            57889999999999999    99999 9999999998876543222333457888853

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.79  E-value=4.6e-09  Score=62.37  Aligned_cols=47  Identities=23%  Similarity=0.198  Sum_probs=36.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL   52 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~   52 (75)
                      +|++|++|++||||.+|+.+|++||+.+++  .+  .......+++++++.
T Consensus       154 ~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~--~~~l~~~ad~v~~~~  200 (217)
T 3m1y_A          154 LNISKTNTLVVGDGANDLSMFKHAHIKIAF--NA--KEVLKQHATHCINEP  200 (217)
T ss_dssp             HTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SC--CHHHHTTCSEEECSS
T ss_pred             cCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--Cc--cHHHHHhcceeeccc
Confidence            588999999999999999999999998765  22  222235678888654

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=98.77  E-value=6.7e-10  Score=67.70  Aligned_cols=56  Identities=18%  Similarity=0.211  Sum_probs=41.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--h-ccceeeCCCCCCCHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--K-DAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~-~~~~~~~~~~~l~~~~l~~   62 (75)
                      ++++|++|+|||||.+|+.+|++||+.++.  ++.  ....  . .++++++++.++ +..|..
T Consensus       159 ~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~--~~~~~~~~~~~~~~~~~~el-~~~l~~  217 (236)
T 2fea_A          159 LSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYL--LNECREQNLNHLPYQDFYEI-RKEIEN  217 (236)
T ss_dssp             HCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHH--HHHHHHTTCCEECCSSHHHH-HHHHHT
T ss_pred             HhccCCeEEEEeCChHHHHHHHhCCeeeec--hHH--HHHHHHCCCCeeecCCHHHH-HHHHHH
Confidence            578899999999999999999999998863  222  1122  2 267888888877 455544

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.75  E-value=4.6e-09  Score=66.16  Aligned_cols=33  Identities=15%  Similarity=0.177  Sum_probs=28.9

Q ss_pred             CCCC-CcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            3 GISE-KDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         3 ~~~p-~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      +.++ +.|+|||||.+|+++|++|||++|+|.||
T Consensus       266 ~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          266 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             TTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             hccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            3455 34799999999999999999999999987

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.73  E-value=3.8e-08  Score=61.25  Aligned_cols=67  Identities=13%  Similarity=0.090  Sum_probs=47.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC-CHHHHHHHHHHHhhcc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV-RLKDLELLLQNLQQLN   71 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~~~~~~~   71 (75)
                      +|++|++|++|||+.+|+++++.||+.++ +  +.........++++..+..+- ....|++++......+
T Consensus       214 lgi~~~~~i~~GD~~NDi~m~~~ag~~va-m--~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~~~  281 (290)
T 3dnp_A          214 LGLSMDDVVAIGHQYDDLPMIELAGLGVA-M--GNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRKG  281 (290)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHHHSSEEEE-C--TTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHHHC-
T ss_pred             cCCCHHHEEEECCchhhHHHHHhcCCEEE-e--cCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcCccc
Confidence            78999999999999999999999997433 3  332333335678888887762 1566676666544433

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=98.72  E-value=4.2e-09  Score=69.07  Aligned_cols=36  Identities=22%  Similarity=0.352  Sum_probs=33.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST   37 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~   37 (75)
                      +|++|++|+||||+.+|+++|++|||++|++.++..
T Consensus       173 lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~  208 (555)
T 3i28_A          173 LKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT  208 (555)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHHH
T ss_pred             cCCChhHEEEECCcHHHHHHHHHcCCEEEEECCCcc
Confidence            689999999999999999999999999999977653

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.66  E-value=3.4e-08  Score=62.29  Aligned_cols=61  Identities=8%  Similarity=-0.010  Sum_probs=43.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC-CHHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV-RLKDLELLLQ   65 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~   65 (75)
                      +|+++++|++|||+.+|+++++.||+. |++  +.........++++.++..+= ....|++++.
T Consensus       240 lgi~~~e~i~~GDs~NDi~m~~~ag~~-vam--~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~  301 (304)
T 3l7y_A          240 WNFTSDHLMAFGDGGNDIEMLKLAKYS-YAM--ANAPKNVKAAANYQAKSNDESGVLDVIDNYLA  301 (304)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHHHCTEE-EEC--TTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred             hCcCHHHEEEECCCHHHHHHHHhcCCe-EEc--CCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence            689999999999999999999999954 333  333333345678888877662 1445555443

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.65  E-value=8.1e-08  Score=56.67  Aligned_cols=52  Identities=10%  Similarity=0.130  Sum_probs=39.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR   56 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~   56 (75)
                      ++++|++|+||||+.+|+.+++++|+.++.. ++  .......+++++.+..+..
T Consensus        95 ~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~--~~~~~~~ad~v~~~~~~~g  146 (180)
T 1k1e_A           95 AGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DA--PIYVKNAVDHVLSTHGGKG  146 (180)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TS--CHHHHTTSSEECSSCTTTT
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-Cc--cHHHHhhCCEEecCCCCCc
Confidence            4789999999999999999999999987642 22  2222356788888876654

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=98.65  E-value=4.5e-09  Score=62.32  Aligned_cols=29  Identities=10%  Similarity=-0.027  Sum_probs=26.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACV   30 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i   30 (75)
                      +++.|++|+|||||.+|+++|++||+.++
T Consensus       141 l~~~~~~~~~iGD~~~Di~~a~~aG~~~~  169 (206)
T 1rku_A          141 FKSLYYRVIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             HHHTTCEEEEEECSSTTHHHHHHSSEEEE
T ss_pred             HHhcCCEEEEEeCChhhHHHHHhcCccEE
Confidence            35678999999999999999999999866

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.63  E-value=1.7e-08  Score=64.62  Aligned_cols=30  Identities=17%  Similarity=0.255  Sum_probs=27.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVI   31 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~   31 (75)
                      +|++|++|+||||+.+|+.++++||+.+++
T Consensus       257 lgi~~~~~v~vGDs~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          257 YDVEIHNTVAVGDGANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             cCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence            588999999999999999999999997665

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.63  E-value=6.3e-08  Score=57.59  Aligned_cols=61  Identities=16%  Similarity=0.164  Sum_probs=43.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCH--HHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL--KDLELLLQ   65 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~   65 (75)
                      +|++|++|+||||+.+|+.+|+++|+.++. .++.  ......+++++.+..+...  +.++.++.
T Consensus       113 ~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~--~~~~~~ad~v~~~~~~~g~~~~~l~~ll~  175 (188)
T 2r8e_A          113 LAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAH--PLLIPRADYVTRIAGGRGAVREVCDLLLL  175 (188)
T ss_dssp             HTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSC--TTTGGGSSEECSSCTTTTHHHHHHHHHHH
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcC--HHHHhcCCEEEeCCCCCcHHHHHHHHHHH
Confidence            578899999999999999999999998764 2322  1222457889988855432  34444443

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.63  E-value=2.5e-08  Score=60.61  Aligned_cols=30  Identities=20%  Similarity=0.173  Sum_probs=27.9

Q ss_pred             EEEEecCHHhHHHHHHcCCeEEEEcCCCCc
Q 048682            9 CLVVEDSVIGLQAATRAGMACVITYTSSTA   38 (75)
Q Consensus         9 ~l~igDs~~di~aA~~AG~~~i~v~~~~~~   38 (75)
                      |+|||||.+|+++|++|||++|++.+++..
T Consensus       161 ~l~VGDs~~Di~aA~~aG~~~i~v~~g~~~  190 (211)
T 2b82_A          161 RIFYGDSDNDITAARDVGARGIRILRASNS  190 (211)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECCCCTTC
T ss_pred             EEEEECCHHHHHHHHHCCCeEEEEecCCCC
Confidence            999999999999999999999999987653

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.63  E-value=2.1e-08  Score=57.99  Aligned_cols=50  Identities=16%  Similarity=0.143  Sum_probs=37.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      ++++|++|+||||+.+|+.+|+++|+.++.. ++  .......+++++.+...
T Consensus        91 ~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~--~~~~~~~ad~v~~~~~~  140 (164)
T 3e8m_A           91 LGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SA--PFYIRRLSTIFLEKRGG  140 (164)
T ss_dssp             HTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TS--CHHHHTTCSSCCCCCTT
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-Ch--HHHHHHhCcEEeccCCC
Confidence            5789999999999999999999999976642 22  22223456777776543

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.05  E-value=4e-09  Score=65.86  Aligned_cols=52  Identities=17%  Similarity=0.173  Sum_probs=39.0

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceee--CCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l   55 (75)
                      +++.+|++|+||||+.+|+.++++||+.   +.++.........+++++  +++.++
T Consensus       193 ~l~~~~~~~~~VGD~~~D~~aa~~Agv~---va~g~~~~~~~~~ad~v~~~~~l~~l  246 (263)
T 2yj3_A          193 KLKQNGNKVLMIGDGVNDAAALALADVS---VAMGNGVDISKNVADIILVSNDIGTL  246 (263)
Confidence            3577899999999999999999999964   334433222334678888  888877

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.62  E-value=2.5e-08  Score=61.39  Aligned_cols=51  Identities=16%  Similarity=0.192  Sum_probs=38.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|++||||.+|+++++.||+.   |..+.........++++..+..+-
T Consensus       212 lgi~~~~~i~~GD~~NDi~m~~~ag~~---vam~na~~~~k~~A~~v~~~~~ed  262 (274)
T 3fzq_A          212 LGVTQKETICFGDGQNDIVMFQASDVT---IAMKNSHQQLKDIATSICEDIFDN  262 (274)
T ss_dssp             HTCCSTTEEEECCSGGGHHHHHTCSEE---EEETTSCHHHHHHCSEEECCGGGT
T ss_pred             cCCCHHHEEEECCChhHHHHHHhcCce---EEecCccHHHHHhhhheeCCCchh
Confidence            689999999999999999999999953   333443333345678888877653

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=98.61  E-value=2.8e-08  Score=57.86  Aligned_cols=33  Identities=27%  Similarity=0.339  Sum_probs=29.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +|++  +|++|||+.+|+++|++||+.++++.++.
T Consensus       150 ~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  182 (190)
T 2fi1_A          150 YQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV  182 (190)
T ss_dssp             TTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred             cCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence            5666  99999999999999999999999987654

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.59  E-value=4.4e-08  Score=60.46  Aligned_cols=50  Identities=12%  Similarity=0.137  Sum_probs=38.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++|++|++|||+.+|+.+++.||+.++ +  +.........+++++++..+
T Consensus       199 ~~~~~~~~~~iGD~~nD~~~~~~ag~~v~-~--~n~~~~~~~~a~~v~~~~~~  248 (261)
T 2rbk_A          199 FGIKLEETMSFGDGGNDISMLRHAAIGVA-M--GQAKEDVKAAADYVTAPIDE  248 (261)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE-C--TTSCHHHHHHSSEECCCGGG
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHcCceEE-e--cCccHHHHhhCCEEeccCch
Confidence            57899999999999999999999998543 3  33222223457888888776

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.57  E-value=2.4e-07  Score=55.16  Aligned_cols=50  Identities=16%  Similarity=0.144  Sum_probs=37.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++|++|+||||+.+|+.++++||+.++ +..+  .......+++++.+..+
T Consensus       106 ~g~~~~~~~~vGD~~nDi~~~~~ag~~~~-~~~~--~~~~~~~ad~v~~~~~~  155 (189)
T 3mn1_A          106 LQLGYEQVAYLGDDLPDLPVIRRVGLGMA-VANA--ASFVREHAHGITRAQGG  155 (189)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTS--CHHHHHTSSEECSSCTT
T ss_pred             cCCChhHEEEECCCHHHHHHHHHCCCeEE-eCCc--cHHHHHhCCEEecCCCC
Confidence            57899999999999999999999998754 3322  22233567888877543

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.56  E-value=1.5e-07  Score=55.51  Aligned_cols=60  Identities=15%  Similarity=0.144  Sum_probs=41.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCC-HHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~-~~~l~~~~   64 (75)
                      ++++|++|+||||+.+|+.++++||+.++ +..+  .......+++++.+..+-. +..+.+++
T Consensus        98 ~~~~~~~~~~vGD~~nD~~~~~~ag~~v~-~~~~--~~~~~~~ad~v~~~~~~~g~~~~l~~~l  158 (176)
T 3mmz_A           98 QGIAPERVLYVGNDVNDLPCFALVGWPVA-VASA--HDVVRGAARAVTTVPGGDGAIREIASWI  158 (176)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTC--CHHHHHHSSEECSSCTTTTHHHHHHHHH
T ss_pred             cCCCHHHEEEEcCCHHHHHHHHHCCCeEE-CCCh--hHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence            57899999999999999999999997654 3222  2223355788887754432 34444433

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.55  E-value=1.2e-07  Score=57.87  Aligned_cols=51  Identities=10%  Similarity=0.079  Sum_probs=38.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|+||||+.+|++++++||+.++ +..+.  ......+++++.+..+-
T Consensus       136 lg~~~~~~~~vGDs~nDi~~~~~ag~~~a-~~~~~--~~~~~~Ad~v~~~~~~~  186 (211)
T 3ij5_A          136 LQCQPEQVAYIGDDLIDWPVMAQVGLSVA-VADAH--PLLLPKAHYVTRIKGGR  186 (211)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHTTSSEEEE-CTTSC--TTTGGGSSEECSSCTTT
T ss_pred             cCcCcceEEEEcCCHHHHHHHHHCCCEEE-eCCcc--HHHHhhCCEEEeCCCCC
Confidence            57899999999999999999999998755 33322  12235678888887544

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.55  E-value=1.8e-07  Score=55.99  Aligned_cols=51  Identities=14%  Similarity=0.149  Sum_probs=38.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+.+|+.+++++|+.++ +.++  .......+++++.+..+-
T Consensus       106 ~~~~~~~~~~vGD~~~Di~~~~~ag~~~~-~~~~--~~~~~~~ad~v~~~~~~~  156 (191)
T 3n1u_A          106 LGLNDDEFAYIGDDLPDLPLIQQVGLGVA-VSNA--VPQVLEFADWRTERTGGR  156 (191)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTC--CHHHHHHSSEECSSCTTT
T ss_pred             hCCCHHHEEEECCCHHHHHHHHHCCCEEE-eCCc--cHHHHHhCCEEecCCCCC
Confidence            57899999999999999999999999863 4332  222335678888876543

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.54  E-value=6.7e-08  Score=59.81  Aligned_cols=51  Identities=20%  Similarity=0.154  Sum_probs=38.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|+++++|++|||+.+|+++++.||+   +|..+.........++++..+..+-
T Consensus       209 lgi~~~~~i~~GD~~NDi~m~~~ag~---~vam~na~~~~k~~A~~v~~~~~e~  259 (279)
T 4dw8_A          209 IGMTREEVIAIGDGYNDLSMIKFAGM---GVAMGNAQEPVKKAADYITLTNDED  259 (279)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSE---EEECTTSCHHHHHHCSEECCCGGGT
T ss_pred             cCCCHHHEEEECCChhhHHHHHHcCc---EEEcCCCcHHHHHhCCEEcCCCCCc
Confidence            58999999999999999999999995   3334444333345678888776653

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.53  E-value=3.3e-08  Score=62.13  Aligned_cols=50  Identities=16%  Similarity=0.213  Sum_probs=36.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceee--CCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l   55 (75)
                      ++.. ++|+|||||.+|+.+|++||+. |++..+  .......+++++  +++.++
T Consensus       221 l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~~~~~--~~~~~~~ad~v~~~~~~~~l  272 (287)
T 3a1c_A          221 LQAK-EVVAFVGDGINDAPALAQADLG-IAVGSG--SDVAVESGDIVLIRDDLRDV  272 (287)
T ss_dssp             HTTT-CCEEEEECTTTCHHHHHHSSEE-EEECCC--SCCSSCCSSEEESSSCTHHH
T ss_pred             HhcC-CeEEEEECCHHHHHHHHHCCee-EEeCCC--CHHHHhhCCEEEeCCCHHHH
Confidence            4566 8999999999999999999997 555432  212234578888  776655

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.53  E-value=2.7e-08  Score=63.88  Aligned_cols=30  Identities=20%  Similarity=0.277  Sum_probs=27.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVI   31 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~   31 (75)
                      +|++|++|+|||||.+|+.+|++||+.+++
T Consensus       258 lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          258 LNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             cCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            578999999999999999999999997665

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.51  E-value=4.2e-07  Score=53.83  Aligned_cols=50  Identities=16%  Similarity=0.164  Sum_probs=38.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      ++++|++|+||||+.+|+.+++.||+.++ +.+..  ......++++..+-.+
T Consensus        95 ~gi~~~~~~~vGD~~nDi~~~~~ag~~~a-~~na~--~~~k~~Ad~v~~~~~~  144 (168)
T 3ewi_A           95 MGLCWKEVAYLGNEVSDEECLKRVGLSAV-PADAC--SGAQKAVGYICKCSGG  144 (168)
T ss_dssp             TTCCGGGEEEECCSGGGHHHHHHSSEEEE-CTTCC--HHHHTTCSEECSSCTT
T ss_pred             cCcChHHEEEEeCCHhHHHHHHHCCCEEE-eCChh--HHHHHhCCEEeCCCCC
Confidence            68999999999999999999999999854 54432  2223567888776544

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.50  E-value=1e-07  Score=58.03  Aligned_cols=60  Identities=20%  Similarity=0.122  Sum_probs=42.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCC-HHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~-~~~l~~~~   64 (75)
                      +|+++++|++|||+.+|+.+++.+|+. +++.++.  ......+++++++..+-- .+.|++++
T Consensus       165 ~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~~--~~~~~~a~~v~~~~~e~Gv~~~l~~~~  225 (231)
T 1wr8_A          165 LGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQAP--KILKENADYVTKKEYGEGGAEAIYHIL  225 (231)
T ss_dssp             HTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTSC--HHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCCC--HHHHhhCCEEecCCCcchHHHHHHHHH
Confidence            578999999999999999999999998 5565542  222245788888775421 34444443

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.50  E-value=5.5e-08  Score=60.72  Aligned_cols=50  Identities=8%  Similarity=0.033  Sum_probs=36.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++|++|++||||.+|+.+++.||+. +++.+  ........+++++.+..+
T Consensus       223 ~~~~~~~~~~~GDs~~D~~~~~~ag~~-~~~~~--~~~~~~~~a~~v~~~~~~  272 (289)
T 3gyg_A          223 YNLNTERAIAFGDSGNDVRMLQTVGNG-YLLKN--ATQEAKNLHNLITDSEYS  272 (289)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHTTSSEE-EECTT--CCHHHHHHCCCBCSSCHH
T ss_pred             cCCChhhEEEEcCCHHHHHHHHhCCcE-EEECC--ccHHHHHhCCEEcCCCCc
Confidence            588999999999999999999999955 33433  222233456777776654

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=98.50  E-value=2.4e-09  Score=64.35  Aligned_cols=47  Identities=15%  Similarity=0.083  Sum_probs=34.3

Q ss_pred             CCCCCCcEEEEecCHH-hHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~-di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|++|   +|||||.+ |+++|++|||++|++.++... ...   +.+++++.++
T Consensus       163 ~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~---~~~i~~l~el  210 (220)
T 2zg6_A          163 VGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV---RDRVKNLREA  210 (220)
T ss_dssp             HCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC---CSCBSSHHHH
T ss_pred             cCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc---ceEECCHHHH
Confidence            46666   99999998 999999999999999765322 111   3456665555

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.47  E-value=2.5e-07  Score=56.92  Aligned_cols=50  Identities=14%  Similarity=0.104  Sum_probs=37.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|+++++|++|||+.+|+++++.||+. |++.+  ........++++..+..+
T Consensus       206 lgi~~~~~ia~GD~~NDi~m~~~ag~~-vam~n--a~~~~k~~Ad~v~~~~~e  255 (268)
T 3r4c_A          206 YRVKVSEIMACGDGGNDIPMLKAAGIG-VAMGN--ASEKVQSVADFVTDTVDN  255 (268)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHHHSSEE-EECTT--SCHHHHHTCSEECCCTTT
T ss_pred             cCCCHHHEEEECCcHHhHHHHHhCCCe-EEeCC--CcHHHHHhcCEeeCCCCc
Confidence            789999999999999999999999965 33333  333333567888887665

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.44  E-value=2.2e-07  Score=57.09  Aligned_cols=51  Identities=18%  Similarity=0.181  Sum_probs=38.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      +|+++++|++||||.+|+.+++.||+.++ +.+  ........++++..+..+-
T Consensus       195 lgi~~~~~ia~GDs~NDi~ml~~ag~~va-m~n--a~~~~k~~A~~v~~~~~~d  245 (258)
T 2pq0_A          195 LGIDKKDVYAFGDGLNDIEMLSFVGTGVA-MGN--AHEEVKRVADFVTKPVDKE  245 (258)
T ss_dssp             HTCCGGGEEEECCSGGGHHHHHHSSEEEE-ETT--CCHHHHHTCSEEECCGGGT
T ss_pred             hCCCHHHEEEECCcHHhHHHHHhCCcEEE-eCC--CcHHHHHhCCEEeCCCCcc
Confidence            68899999999999999999999999655 432  2222234578888776543

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.44  E-value=8.7e-08  Score=57.54  Aligned_cols=29  Identities=10%  Similarity=-0.042  Sum_probs=26.8

Q ss_pred             CCCCcEEEEecCHHhHHHHHHcCCeEEEE
Q 048682            4 ISEKDCLVVEDSVIGLQAATRAGMACVIT   32 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~AG~~~i~v   32 (75)
                      ++|++|+|||||.+|+.+++.||+.++..
T Consensus       176 ~~~~~~~~vGDs~~D~~~~~~ag~~~~~~  204 (232)
T 3fvv_A          176 GDFAESYFYSDSVNDVPLLEAVTRPIAAN  204 (232)
T ss_dssp             GGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred             CchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence            88999999999999999999999987653

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.39  E-value=1e-07  Score=58.97  Aligned_cols=50  Identities=18%  Similarity=0.229  Sum_probs=30.8

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|+++++|++|||+.+|+++++.||+.   |..+.........++++..+..+
T Consensus       209 lgi~~~~~i~~GD~~NDi~m~~~ag~~---vam~na~~~~k~~A~~v~~~~~e  258 (279)
T 3mpo_A          209 LGLTADDVMTLGDQGNDLTMIKYAGLG---VAMGNAIDEVKEAAQAVTLTNAE  258 (279)
T ss_dssp             TTCCGGGEEEC--CCTTHHHHHHSTEE---CBC---CCHHHHHCSCBC-----
T ss_pred             cCCCHHHEEEECCchhhHHHHHhcCce---eeccCCCHHHHHhcceeccCCCc
Confidence            789999999999999999999999954   33333232333557777776654

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=98.39  E-value=1.8e-07  Score=54.80  Aligned_cols=43  Identities=12%  Similarity=0.131  Sum_probs=33.3

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|+|||||.+|++  ++|| ++|++.+++...   ..++++++++.++
T Consensus       129 ~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el  171 (180)
T 3bwv_A          129 LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDV  171 (180)
T ss_dssp             CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHH
T ss_pred             cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHH
Confidence            67999999999996  5689 999998765321   4567788887665

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.39  E-value=8e-07  Score=53.54  Aligned_cols=51  Identities=10%  Similarity=0.023  Sum_probs=38.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+.+|+.++++||+.++ +.+.  .......++++..+..+-
T Consensus       112 ~~~~~~~~~~vGD~~nDi~~~~~ag~~va-~~na--~~~~~~~ad~v~~~~~~~  162 (195)
T 3n07_A          112 LAIAPEQTGYIGDDLIDWPVMEKVALRVC-VADG--HPLLAQRANYVTHIKGGH  162 (195)
T ss_dssp             HCCCGGGEEEEESSGGGHHHHTTSSEEEE-CTTS--CHHHHHHCSEECSSCTTT
T ss_pred             hCCCHHHEEEEcCCHHHHHHHHHCCCEEE-ECCh--HHHHHHhCCEEEcCCCCC
Confidence            57899999999999999999999998754 3322  222235678888776544

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.35  E-value=4.8e-07  Score=56.47  Aligned_cols=50  Identities=8%  Similarity=0.116  Sum_probs=38.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++++++++|||+.+|+.+.+.||+. |++.++  .......++++..+..+
T Consensus       223 lgi~~~e~ia~GD~~NDi~ml~~ag~~-vam~na--~~~~k~~A~~v~~s~~e  272 (283)
T 3dao_A          223 FDLLPDEVCCFGDNLNDIEMLQNAGIS-YAVSNA--RQEVIAAAKHTCAPYWE  272 (283)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHHHSSEE-EEETTS--CHHHHHHSSEEECCGGG
T ss_pred             hCCCHHHEEEECCCHHHHHHHHhCCCE-EEcCCC--CHHHHHhcCeECCCCCC
Confidence            789999999999999999999999954 445443  22233567888877655

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=98.33  E-value=6.4e-07  Score=56.02  Aligned_cols=50  Identities=22%  Similarity=0.065  Sum_probs=38.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|+++++|++||||.+|+.+++.||+ .|++.++.  ......++++..+..+
T Consensus       228 ~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~--~~~~~~a~~v~~~~~~  277 (288)
T 1nrw_A          228 LNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAR--EDIKSIADAVTLTNDE  277 (288)
T ss_dssp             TTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCC--HHHHHHCSEECCCGGG
T ss_pred             hCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCCC--HHHHhhCceeecCCCc
Confidence            68899999999999999999999999 56675543  2222347788777654

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.31  E-value=6.3e-07  Score=58.90  Aligned_cols=46  Identities=15%  Similarity=0.148  Sum_probs=34.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD   51 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~   51 (75)
                      +|++|++|+||||+.+|+.+|++||+.+++  +..  ......+++++.+
T Consensus       335 ~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~--~~~~~~ad~~i~~  380 (415)
T 3p96_A          335 AGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAK--PALREVADASLSH  380 (415)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCC--HHHHHHCSEEECS
T ss_pred             cCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCC--HHHHHhCCEEEcc
Confidence            588999999999999999999999998764  222  2222456666554

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.29  E-value=6.6e-07  Score=54.83  Aligned_cols=46  Identities=17%  Similarity=0.092  Sum_probs=31.4

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceee--CCCCCC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l   55 (75)
                      -+|+||||+.+|++++++||+   ++.++.........+++++  +++.++
T Consensus       206 ~~~~~vGD~~nDi~~~~~Ag~---~va~~~~~~~~~~~a~~~~~~~~~~~l  253 (280)
T 3skx_A          206 YVTAMVGDGVNDAPALAQADV---GIAIGAGTDVAVETADIVLVRNDPRDV  253 (280)
T ss_dssp             SCEEEEECTTTTHHHHHHSSE---EEECSCCSSSCCCSSSEECSSCCTHHH
T ss_pred             CCEEEEeCCchhHHHHHhCCc---eEEecCCcHHHHhhCCEEEeCCCHHHH
Confidence            479999999999999999996   3444443333334456655  555554

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.25  E-value=1.6e-06  Score=53.77  Aligned_cols=60  Identities=17%  Similarity=0.068  Sum_probs=42.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCC-HHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~-~~~l~~~~   64 (75)
                      +|+++++|++|||+.+|+.+++.+|+. |++.++  .......++++..+..+-- ...|++++
T Consensus       203 l~i~~~~~~~~GD~~nD~~m~~~ag~~-va~~na--~~~~k~~a~~v~~~~~~dGVa~~l~~~~  263 (271)
T 1rlm_A          203 WDLSPQNVVAIGDSGNDAEMLKMARYS-FAMGNA--AENIKQIARYATDDNNHEGALNVIQAVL  263 (271)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHCSEE-EECTTC--CHHHHHHCSEECCCGGGTHHHHHHHHHH
T ss_pred             hCCCHHHEEEECCcHHHHHHHHHcCCe-EEeCCc--cHHHHHhCCeeCcCCCCChHHHHHHHHH
Confidence            588999999999999999999999985 445433  2222345788887766521 34455544

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=98.25  E-value=9.1e-07  Score=54.90  Aligned_cols=50  Identities=14%  Similarity=0.129  Sum_probs=36.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|+++++|++|||+.+|+.+++.||+. +++  +.........+++++.+..+
T Consensus       202 ~~~~~~~~~~~GD~~nD~~~~~~ag~~-v~~--~n~~~~~~~~a~~v~~~~~~  251 (268)
T 1nf2_A          202 MNWKKEEIVVFGDNENDLFMFEEAGLR-VAM--ENAIEKVKEASDIVTLTNND  251 (268)
T ss_dssp             HTCCGGGEEEEECSHHHHHHHTTCSEE-EEC--TTSCHHHHHHCSEECCCTTT
T ss_pred             cCCCHHHeEEEcCchhhHHHHHHcCCE-EEe--cCCCHHHHhhCCEEEccCCc
Confidence            578999999999999999999999984 333  33222222447788777654

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=98.20  E-value=2.1e-06  Score=53.66  Aligned_cols=50  Identities=16%  Similarity=0.108  Sum_probs=37.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|+++++|++|||+.+|+.+++.||+ .|++.++.  ......+++++.+..+
T Consensus       210 ~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~~--~~~~~~a~~v~~~~~~  259 (282)
T 1rkq_A          210 LGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNAI--PSVKEVANFVTKSNLE  259 (282)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSC--HHHHHHCSEECCCTTT
T ss_pred             hCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCCc--HHHHhhCCEEecCCCc
Confidence            57899999999999999999999998 45554432  2222457888877655

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=98.10  E-value=4.1e-06  Score=52.21  Aligned_cols=50  Identities=16%  Similarity=0.200  Sum_probs=34.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccc--eeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAI--AIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~--~~~~~~~~   54 (75)
                      +|+++++|++|||+.+|+++.+.||+. |++.+  ........++  .+..+..+
T Consensus       221 lgi~~~~~ia~GD~~NDi~ml~~ag~~-vAm~N--a~~~vk~~A~~~~v~~sn~e  272 (285)
T 3pgv_A          221 LGYTLSDCIAFGDGMNDAEMLSMAGKG-CIMAN--AHQRLKDLHPELEVIGSNAD  272 (285)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHHHSSEE-EECTT--SCHHHHHHCTTSEECCCGGG
T ss_pred             hCCCHHHEEEECCcHhhHHHHHhcCCE-EEccC--CCHHHHHhCCCCEecccCCc
Confidence            689999999999999999999999954 33333  3322223344  35555443

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=98.06  E-value=8.7e-06  Score=51.54  Aligned_cols=50  Identities=16%  Similarity=0.208  Sum_probs=37.8

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeC-CCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP-DLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~-~~~~   54 (75)
                      +|+++++|++|||+.+|+.+++.||+. |++.++.  ......+++++. +..+
T Consensus       236 ~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~--~~~k~~a~~v~~~~~~~  286 (301)
T 2b30_A          236 YNISNDQVLVVGDAENDIAMLSNFKYS-FAVANAT--DSAKSHAKCVLPVSHRE  286 (301)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCC--HHHHHHSSEECSSCTTT
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCCc--HHHHhhCCEEEccCCCC
Confidence            688999999999999999999999985 5555432  222245778877 6654

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.99  E-value=3.2e-06  Score=56.02  Aligned_cols=30  Identities=23%  Similarity=0.249  Sum_probs=27.1

Q ss_pred             CCCCCcEEEEecCH-----------------HhHHHHHHcCCeEEEE
Q 048682            3 GISEKDCLVVEDSV-----------------IGLQAATRAGMACVIT   32 (75)
Q Consensus         3 ~~~p~~~l~igDs~-----------------~di~aA~~AG~~~i~v   32 (75)
                      +++|++|+||||+.                 +|+++|++||++++..
T Consensus       171 ~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p  217 (416)
T 3zvl_A          171 PISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP  217 (416)
T ss_dssp             CCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred             CCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence            48999999999997                 8999999999998743

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.96  E-value=8.2e-06  Score=49.78  Aligned_cols=50  Identities=8%  Similarity=-0.071  Sum_probs=37.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      ++++++++++|||+.+|+.+++.||+. |++.++.  ......++++..+..+
T Consensus       165 ~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~~--~~~k~~a~~v~~~~~~  214 (227)
T 1l6r_A          165 YSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANAT--DNIKAVSDFVSDYSYG  214 (227)
T ss_dssp             TTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTSC--HHHHHHCSEECSCCTT
T ss_pred             hCcCHHHEEEECCcHHhHHHHHHcCce-EEecCch--HHHHHhCCEEecCCCC
Confidence            678899999999999999999999985 5554432  2222457788777654

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.88  E-value=5.9e-06  Score=50.75  Aligned_cols=32  Identities=22%  Similarity=0.202  Sum_probs=27.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYT   34 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~   34 (75)
                      +|++++++++|||+.+|+.+.+.+|+. |++.+
T Consensus       174 ~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~n  205 (244)
T 1s2o_A          174 LAMEPSQTLVCGDSGNDIGLFETSARG-VIVRN  205 (244)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHTSSSEE-EECTT
T ss_pred             hCCCHHHEEEECCchhhHHHHhccCcE-EEEcC
Confidence            688999999999999999999999984 55543

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=97.84  E-value=6e-06  Score=50.80  Aligned_cols=46  Identities=15%  Similarity=0.060  Sum_probs=33.7

Q ss_pred             CCCCCC--CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCC
Q 048682            1 RLGISE--KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL   52 (75)
Q Consensus         1 ~l~~~p--~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~   52 (75)
                      ++|+++  ++|++||||.+|+.+++.||+. |++.+...    . .++++..+.
T Consensus       187 ~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~----~-~~~~~~~~~  234 (259)
T 3zx4_A          187 LWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYVGRGDP----P-EGVLATPAP  234 (259)
T ss_dssp             TCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EECSSSCC----C-TTCEECSSC
T ss_pred             HhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEeCChhh----c-CCcEEeCCC
Confidence            367888  9999999999999999999986 44544432    2 345555544

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=97.80  E-value=2e-06  Score=52.02  Aligned_cols=32  Identities=16%  Similarity=0.168  Sum_probs=28.6

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEE
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVIT   32 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v   32 (75)
                      ++|.++++||+||||+.+++++.++||+++.+
T Consensus       132 ~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~  163 (195)
T 2hhl_A          132 RLGRELSKVIIVDNSPASYIFHPENAVPVQSW  163 (195)
T ss_dssp             GSSSCGGGEEEEESCGGGGTTCGGGEEECCCC
T ss_pred             HhCCChhHEEEEECCHHHhhhCccCccEEeee
Confidence            36899999999999999999999999987544

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.49  E-value=2.5e-05  Score=48.69  Aligned_cols=49  Identities=16%  Similarity=-0.020  Sum_probs=27.7

Q ss_pred             CCCCc--EEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhh---ccc-eeeCCCC
Q 048682            4 ISEKD--CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK---DAI-AIYPDLS   53 (75)
Q Consensus         4 ~~p~~--~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~---~~~-~~~~~~~   53 (75)
                      +++++  +++|||+.+|+.+.+.+|+. |++.++........   .++ ++..+..
T Consensus       204 ~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~  258 (275)
T 1xvi_A          204 LSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREG  258 (275)
T ss_dssp             HHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC---------------------
T ss_pred             cccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCC
Confidence            56788  99999999999999999985 77766653222331   245 6665544

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=97.47  E-value=1.2e-05  Score=47.94  Aligned_cols=29  Identities=17%  Similarity=0.279  Sum_probs=26.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeE
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMAC   29 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~   29 (75)
                      ++|.++++||+||||+.+++++.++|+++
T Consensus       119 ~Lg~~~~~~vivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          119 RLGRDLRRVLILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             GTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred             HhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence            36899999999999999999999999985

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=97.47  E-value=4e-05  Score=48.89  Aligned_cols=57  Identities=25%  Similarity=0.270  Sum_probs=37.4

Q ss_pred             CCCCc----EEEEecCHHhHHHHHHc----CCeEEEEcCCCCchhhhhccceeeCCCCCCC-HHHHHHHH
Q 048682            4 ISEKD----CLVVEDSVIGLQAATRA----GMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL   64 (75)
Q Consensus         4 ~~p~~----~l~igDs~~di~aA~~A----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~-~~~l~~~~   64 (75)
                      +++++    |++|||+.+|+.+++.|    |+.+ ++ +..  ......+++++.+..+-- ...|++++
T Consensus       215 i~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~v-am-na~--~~lk~~Ad~v~~~~~~dGV~~~l~~~~  280 (332)
T 1y8a_A          215 YCESKGIDFPVVVGDSISDYKMFEAARGLGGVAI-AF-NGN--EYALKHADVVIISPTAMSEAKVIELFM  280 (332)
T ss_dssp             HHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEE-EE-SCC--HHHHTTCSEEEECSSTHHHHHHHHHHH
T ss_pred             cChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEE-Ee-cCC--HHHHhhCcEEecCCCCCHHHHHHHHHH
Confidence            34566    99999999999999999    9974 45 442  222245788877654311 34444443

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=97.45  E-value=2.8e-05  Score=48.69  Aligned_cols=31  Identities=13%  Similarity=0.075  Sum_probs=26.5

Q ss_pred             cEEEEecCHHhHHHHH-------H---------cCCeEEEEcCCCCc
Q 048682            8 DCLVVEDSVIGLQAAT-------R---------AGMACVITYTSSTA   38 (75)
Q Consensus         8 ~~l~igDs~~di~aA~-------~---------AG~~~i~v~~~~~~   38 (75)
                      .|+||||+.+|+++|+       +         +||++|.++++...
T Consensus       174 ~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~  220 (258)
T 2i33_A          174 IVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYG  220 (258)
T ss_dssp             EEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSS
T ss_pred             ceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcc
Confidence            4899999999999993       4         89999999987543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.23  E-value=9.7e-05  Score=45.32  Aligned_cols=32  Identities=13%  Similarity=0.005  Sum_probs=27.0

Q ss_pred             CC-CCCcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            3 GI-SEKDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         3 ~~-~p~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      ++ +++++++|||+.+|+.+.+.||+. |++.++
T Consensus       192 ~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna  224 (249)
T 2zos_A          192 KRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSL  224 (249)
T ss_dssp             HTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSC
T ss_pred             ccCCCceEEEECCCcccHHHHHhCCcE-EEeCCC
Confidence            45 789999999999999999999985 556554

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.86  E-value=0.00041  Score=42.81  Aligned_cols=32  Identities=3%  Similarity=-0.249  Sum_probs=28.8

Q ss_pred             CCCCCCcEEEEec----CHHhHHHHHHcCCeEEEEc
Q 048682            2 LGISEKDCLVVED----SVIGLQAATRAGMACVITY   33 (75)
Q Consensus         2 l~~~p~~~l~igD----s~~di~aA~~AG~~~i~v~   33 (75)
                      +|++++++++|||    +.||+.+-+.+|+..+++.
T Consensus       206 ~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~  241 (262)
T 2fue_A          206 DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV  241 (262)
T ss_dssp             TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS
T ss_pred             HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec
Confidence            5789999999999    9999999999998777773

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=96.18  E-value=0.0019  Score=44.64  Aligned_cols=34  Identities=24%  Similarity=0.372  Sum_probs=30.3

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHH-HcCCeEEEEcCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYTS   35 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~-~AG~~~i~v~~~   35 (75)
                      +|+..++++||||.. .||..++ .+|++|++|...
T Consensus       358 lg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          358 LGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             HTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             hCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence            478899999999997 7999997 999999999754

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=96.11  E-value=0.0088  Score=41.73  Aligned_cols=46  Identities=17%  Similarity=0.168  Sum_probs=31.8

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceee--CCCCCC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l   55 (75)
                      ++++||||+.||+.+.+.||+   +|..+.........+|+++  +++..+
T Consensus       519 ~~v~~vGDg~ND~~al~~A~v---giamg~g~~~a~~~AD~vl~~~~~~~i  566 (645)
T 3j08_A          519 EVVAFVGDGINDAPALAQADL---GIAVGSGSDVAVESGDIVLIRDDLRDV  566 (645)
T ss_dssp             CCEEEEECSSSCHHHHHHSSE---EEEECCCSCCSSCCSSSEESSCCTTHH
T ss_pred             CeEEEEeCCHhHHHHHHhCCE---EEEeCCCcHHHHHhCCEEEecCCHHHH
Confidence            679999999999999999994   3433332222335577777  555555

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.11  E-value=0.0024  Score=38.80  Aligned_cols=33  Identities=9%  Similarity=-0.170  Sum_probs=26.8

Q ss_pred             CCCCCCcEEEEec----CHHhHHHHHHcCCeEEEEcC
Q 048682            2 LGISEKDCLVVED----SVIGLQAATRAGMACVITYT   34 (75)
Q Consensus         2 l~~~p~~~l~igD----s~~di~aA~~AG~~~i~v~~   34 (75)
                      +|++++++++|||    +.||+.+-+.+|.-.+++.+
T Consensus       197 ~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N  233 (246)
T 2amy_A          197 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  233 (246)
T ss_dssp             TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence            5789999999999    99999999999976676654

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=95.81  E-value=0.023  Score=40.14  Aligned_cols=46  Identities=17%  Similarity=0.168  Sum_probs=32.0

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceee--CCCCCC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l   55 (75)
                      ++++||||+.||+.+-+.|++   +|.-+.........+|+++  +++..+
T Consensus       597 ~~v~~vGDg~ND~~al~~A~v---giamg~g~~~a~~~AD~vl~~~~~~~i  644 (723)
T 3j09_A          597 EVVAFVGDGINDAPALAQADL---GIAVGSGSDVAVESGDIVLIRDDLRDV  644 (723)
T ss_dssp             CCEEEEECSSTTHHHHHHSSE---EEECCCCSCCSSCCSSEECSSCCTTHH
T ss_pred             CeEEEEECChhhHHHHhhCCE---EEEeCCCcHHHHHhCCEEEeCCCHHHH
Confidence            679999999999999999994   4443332222335678877  455554

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.27  E-value=0.026  Score=34.21  Aligned_cols=54  Identities=17%  Similarity=0.154  Sum_probs=34.8

Q ss_pred             EEEEecCHHhHHHHHHc--CCeEEEEcCCCCchhhhhccceeeCC---CCCCCHHHHHHHHHHHhhc
Q 048682            9 CLVVEDSVIGLQAATRA--GMACVITYTSSTAEQDFKDAIAIYPD---LSNVRLKDLELLLQNLQQL   70 (75)
Q Consensus         9 ~l~igDs~~di~aA~~A--G~~~i~v~~~~~~~~~~~~~~~~~~~---~~~l~~~~l~~~~~~~~~~   70 (75)
                      +++|||+.+|+.+=+.+  |.. |++.+..      ..++++..+   -..+ ...|++++...++.
T Consensus       174 via~GD~~ND~~Ml~~a~~g~~-vam~Na~------~~A~~v~~~~~~~~gV-~~~l~~~~~~~~~~  232 (239)
T 1u02_A          174 AIIAGDDATDEAAFEANDDALT-IKVGEGE------THAKFHVADYIEMRKI-LKFIEMLGVQKKQE  232 (239)
T ss_dssp             EEEEESSHHHHHHHHTTTTSEE-EEESSSC------CCCSEEESSHHHHHHH-HHHHHHHHHHHC--
T ss_pred             eEEEeCCCccHHHHHHhhCCcE-EEECCCC------CcceEEeCCCCCHHHH-HHHHHHHHHhcccc
Confidence            89999999999999999  865 4455441      235666666   2233 45566655554443

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=92.86  E-value=0.45  Score=33.87  Aligned_cols=47  Identities=17%  Similarity=0.144  Sum_probs=32.0

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceee--CCCCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY--PDLSNV   55 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l   55 (75)
                      .+.++||||+.||+.+-+.|++. |++..+  .......+|++.  +++..+
T Consensus       616 g~~V~~vGDG~ND~paL~~AdvG-IAmg~g--~d~a~~~AD~vl~~~~~~~i  664 (736)
T 3rfu_A          616 GLIVAMAGDGVNDAPALAKADIG-IAMGTG--TDVAIESAGVTLLHGDLRGI  664 (736)
T ss_dssp             SCCEEEEECSSTTHHHHHHSSEE-EEESSS--CSHHHHHCSEEECSCCSTTH
T ss_pred             CCEEEEEECChHhHHHHHhCCEE-EEeCCc--cHHHHHhCCEEEccCCHHHH
Confidence            45799999999999999999954 334333  222345677777  444444

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=92.64  E-value=0.078  Score=32.44  Aligned_cols=30  Identities=7%  Similarity=-0.138  Sum_probs=25.7

Q ss_pred             CCCcEEEEecC----HHhHHHHHHcCCeEEEEcC
Q 048682            5 SEKDCLVVEDS----VIGLQAATRAGMACVITYT   34 (75)
Q Consensus         5 ~p~~~l~igDs----~~di~aA~~AG~~~i~v~~   34 (75)
                      +++++++|||+    .||+.+-+.+|.-.++|.+
T Consensus       198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n  231 (246)
T 3f9r_A          198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS  231 (246)
T ss_dssp             TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred             CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence            68999999996    9999999999876677654

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=91.82  E-value=0.81  Score=33.44  Aligned_cols=42  Identities=12%  Similarity=0.057  Sum_probs=29.3

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD   51 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~   51 (75)
                      +.+.|+||+.||+.+-++|++... +..+  .......+++++.+
T Consensus       697 ~~v~~~GDG~ND~~alk~Advgia-mg~g--~~~ak~aAd~vl~~  738 (995)
T 3ar4_A          697 EITAMTGDGVNDAPALKKAEIGIA-MGSG--TAVAKTASEMVLAD  738 (995)
T ss_dssp             CCEEEEECSGGGHHHHHHSTEEEE-ETTS--CHHHHHTCSEEETT
T ss_pred             CEEEEEcCCchhHHHHHHCCeEEE-eCCC--CHHHHHhCCEEECC
Confidence            579999999999999999998533 4322  22223457777743

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=90.90  E-value=0.23  Score=33.75  Aligned_cols=34  Identities=12%  Similarity=0.263  Sum_probs=27.8

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHH-cCCeEEEEcCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATR-AGMACVITYTS   35 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~-AG~~~i~v~~~   35 (75)
                      +|+.-.+++||||+. .||..++. .|++|++|-..
T Consensus       291 lg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          291 LGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             TTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             hCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence            466777999999997 79877765 79999999754

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=90.21  E-value=0.064  Score=33.41  Aligned_cols=22  Identities=18%  Similarity=0.204  Sum_probs=17.8

Q ss_pred             CCcEEEEecCHHhHHHHHHcCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGM   27 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~   27 (75)
                      .++++|+||+.+|+.+++....
T Consensus       230 ~~~v~~vGDGiNDa~m~k~l~~  251 (297)
T 4fe3_A          230 NSNIILLGDSQGDLRMADGVAN  251 (297)
T ss_dssp             CCEEEEEESSGGGGGTTTTCSC
T ss_pred             CCEEEEEeCcHHHHHHHhCccc
Confidence            3579999999999999885443

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=86.83  E-value=1.1  Score=32.93  Aligned_cols=45  Identities=18%  Similarity=0.033  Sum_probs=29.8

Q ss_pred             cEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            8 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         8 ~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      .++|+||+.||+.+=+.||+... +.. .........+|++..+...
T Consensus       721 ~V~a~GDG~ND~~mLk~A~vGIA-Mg~-ng~d~aK~aAD~Vl~~~~~  765 (1034)
T 3ixz_A          721 IVAVTGDGVNDSPALKKADIGVA-MGI-AGSDAAKNAADMILLDDNF  765 (1034)
T ss_pred             EEEEECCcHHhHHHHHHCCeeEE-eCC-ccCHHHHHhcCEEeccCCc
Confidence            47899999999999999997533 320 2222223457887765543

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=84.11  E-value=1.7  Score=31.96  Aligned_cols=43  Identities=21%  Similarity=0.089  Sum_probs=28.7

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD   51 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~   51 (75)
                      +.+.|+||+.||+.+=+.|++... +.. .........+++++.+
T Consensus       715 ~~V~~iGDG~ND~paLk~AdvGIA-mg~-~gtd~ak~aAD~Vl~~  757 (1028)
T 2zxe_A          715 AIVAVTGDGVNDSPALKKADIGVA-MGI-SGSDVSKQAADMILLD  757 (1028)
T ss_dssp             CCEEEEECSGGGHHHHHHSSEEEE-ESS-SCCHHHHHHCSEEETT
T ss_pred             CEEEEEcCCcchHHHHHhCCceEE-eCC-ccCHHHHHhcCEEecC
Confidence            468899999999999999997643 331 1222223456777644

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=82.94  E-value=0.055  Score=34.10  Aligned_cols=14  Identities=21%  Similarity=0.147  Sum_probs=12.7

Q ss_pred             cEEEEecCHHhHHH
Q 048682            8 DCLVVEDSVIGLQA   21 (75)
Q Consensus         8 ~~l~igDs~~di~a   21 (75)
                      -+++|||..+|+.+
T Consensus       175 iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          175 IVLYVGDNLDDFGN  188 (262)
T ss_dssp             EEEEEESSGGGGCS
T ss_pred             EEEEECCChHHhcc
Confidence            38899999999998

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=82.62  E-value=0.062  Score=33.82  Aligned_cols=14  Identities=21%  Similarity=0.200  Sum_probs=12.8

Q ss_pred             cEEEEecCHHhHHH
Q 048682            8 DCLVVEDSVIGLQA   21 (75)
Q Consensus         8 ~~l~igDs~~di~a   21 (75)
                      -+++|||+.+|+.+
T Consensus       175 iv~~iGD~~~Dl~~  188 (260)
T 3pct_A          175 IVLFVGDNLNDFGD  188 (260)
T ss_dssp             EEEEEESSGGGGCG
T ss_pred             EEEEECCChHHcCc
Confidence            48899999999998

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=81.21  E-value=0.19  Score=30.49  Aligned_cols=30  Identities=3%  Similarity=0.074  Sum_probs=24.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVI   31 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~   31 (75)
                      +|.++++||+|+|++..+......|++...
T Consensus       125 Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~  154 (204)
T 3qle_A          125 LNRDLSKVIIIDTDPNSYKLQPENAIPMEP  154 (204)
T ss_dssp             SCSCGGGEEEEESCTTTTTTCGGGEEECCC
T ss_pred             hCCChHHEEEEECCHHHHhhCccCceEeee
Confidence            678899999999999988777777766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	75
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	8e-13
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	3e-10
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	9e-08
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	2e-07
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	2e-07
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	2e-07
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	7e-07
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	9e-07
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	2e-06
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	1e-05
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	1e-05
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	1e-05
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	3e-05
d2o2xa1	209	c.108.1.19 (A:8-216) Hypothetical protein Mll2559	3e-05
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	3e-05
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	8e-05
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	1e-04
d2ah5a1	210	c.108.1.6 (A:1-210) predicted phosphatase SP0104 {	2e-04
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	4e-04
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	0.002
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	0.002
d1jl5a_	353	c.10.2.6 (A:) Leucine rich effector protein YopM {	0.003
d1jl5a_	353	c.10.2.6 (A:) Leucine rich effector protein YopM {	0.003

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 58.3 bits (139), Expect = 8e-13
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
            +G++  + + +EDS  G+QA   +G   +         +D  D I I PD S+  L+ L
Sbjct: 157 AVGVAPSESIGLEDSQAGIQAIKDSGALPIGV----GRPEDLGDDIVIVPDTSHYTLEFL 212

Query: 61  -ELLLQN 66
            E+ LQ 
Sbjct: 213 KEVWLQK 219

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 51.4 bits (121), Expect = 3e-10
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
           +LG+    C+ +EDSV G+ A+  A M  + +    +  +  F  A      L+ +  KD
Sbjct: 156 KLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKD 215

Query: 60  L 60
           L
Sbjct: 216 L 216

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 44.8 bits (104), Expect = 9e-08
 Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 19/86 (22%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV-------------------ITYTSSTAEQD 41
            LG++  + L V  +   +  A   G +                        T   A + 
Sbjct: 159 VLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRM 218

Query: 42  FKDAIAIYPDLSNVRLKDLELLLQNL 67
            ++  A  PD     L DL  L++ +
Sbjct: 219 REETYAEAPDFVVPALGDLPRLVRGM 244

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 44.0 bits (102), Expect = 2e-07
 Identities = 6/55 (10%), Positives = 20/55 (36%), Gaps = 4/55 (7%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAE---QDFKDAIAIYPD 51
           +  ++  +   + D  + ++ A  +G+  +    ++       Q   D   I+  
Sbjct: 149 KYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTYEGNHRIQALADISRIFET 203

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 43.7 bits (101), Expect = 2e-07
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 4/59 (6%)

Query: 4   ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 62
           ++ ++ L + DSV   Q A  A +   +         D +     +    ++    LEL
Sbjct: 152 VAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI----LEL 206

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 43.7 bits (101), Expect = 2e-07
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 3   GISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 61
           G+S    +VVEDSV G+  A  AGM  +  T  S T             +    R++DL 
Sbjct: 155 GVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLP 214

Query: 62  LLLQNLQQ 69
            ++  + +
Sbjct: 215 AVIAAMAE 222

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (97), Expect = 7e-07
 Identities = 7/47 (14%), Positives = 21/47 (44%)

Query: 2   LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 48
           L     + + ++D    L+ A   GM  ++ + +++A ++ +     
Sbjct: 170 LKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKVTGT 216

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 9e-07
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMAC--VITYTSSTAEQDFKDAIAIYPDLS 53
            +G S  + L + D      AA  A +    V+   ++    D K   ++    S
Sbjct: 196 SIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFS 250

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 40.9 bits (94), Expect = 2e-06
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 44
           +  IS    LV+ D  I ++A   AG+   + +TS    +   D
Sbjct: 146 KYQISS--GLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLD 186

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 39.0 bits (89), Expect = 1e-05
 Identities = 8/44 (18%), Positives = 18/44 (40%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 44
             G S  D +  +D+   ++ A + G+  ++    +T    F  
Sbjct: 153 AEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAK 196

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 38.7 bits (88), Expect = 1e-05
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 1/56 (1%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNV 55
            LG+     L V  +      A   G     I  T +  E+  +        L  V
Sbjct: 161 ALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 38.6 bits (89), Expect = 1e-05
 Identities = 16/70 (22%), Positives = 31/70 (44%)

Query: 2   LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 61
             +++ D  +V DS+  L +A + G   + T T    +    +  A + D     L +L 
Sbjct: 311 NIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR 370

Query: 62  LLLQNLQQLN 71
            +L NL + +
Sbjct: 371 GVLDNLLEHH 380

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.5 bits (86), Expect = 3e-05
 Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 6/53 (11%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVIT---YTSSTAEQ---DFKDAIA 47
           + G+     +  +D    +    R G+ C+      +  T  Q    F  A A
Sbjct: 110 KTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKAQA 162

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

 Score = 37.6 bits (86), Expect = 3e-05
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 1   RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 60
           RL +  +  L+V D +  +QA  RAG+A          E   +   AI P   +  L DL
Sbjct: 141 RLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDG---EAAVQPGFAIRPLRDSSELGDL 197

Query: 61  ELLLQNLQQLN 71
              ++ L + N
Sbjct: 198 LAAIETLGRDN 208

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 37.8 bits (86), Expect = 3e-05
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 1   RLGISEKD-CLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLK 58
            LG+   +  + V D+V  ++    AGM  V +   SS      ++   +       +++
Sbjct: 168 ELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIE 227

Query: 59  DLELLLQN 66
            +      
Sbjct: 228 VVRNRFVE 235

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 8e-05
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 2   LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 48
           L  S  + + ++D    L+ A   GM  ++   + TA ++ +    I
Sbjct: 172 LKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGI 218

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 35.9 bits (81), Expect = 1e-04
 Identities = 5/68 (7%), Positives = 24/68 (35%), Gaps = 7/68 (10%)

Query: 2   LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLKD 59
              S    +++ D+   ++ A       +   T +   ++        ++ + +     +
Sbjct: 164 ANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFA-----E 218

Query: 60  LELLLQNL 67
            + +L ++
Sbjct: 219 TDEVLASI 226

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 35.2 bits (79), Expect = 2e-04
 Identities = 7/62 (11%), Positives = 18/62 (29%), Gaps = 6/62 (9%)

Query: 7   KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 66
           +  +++ D+   +  A   G+  +        + D  +    Y             +L  
Sbjct: 155 EQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDY------IAHKPLEVLAY 208

Query: 67  LQ 68
            Q
Sbjct: 209 FQ 210

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.4 bits (77), Expect = 4e-04
 Identities = 9/50 (18%), Positives = 17/50 (34%)

Query: 4   ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 53
               + L + D+ + L AA   G+A  +      A         +Y +  
Sbjct: 174 AKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFE 223

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 32.6 bits (72), Expect = 0.002
 Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 3/59 (5%)

Query: 7   KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 65
           K  L V DS   + AA  AG A V              +    PD       D+  + Q
Sbjct: 169 KQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQS---KPDWIFDDFADILKITQ 224

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.5 bits (72), Expect = 0.002
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 1   RLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 59
            LG+   DC++V D++   +Q    AG+   +    S          +  P      + +
Sbjct: 176 LLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKS---GRVPLTSSPMPHYMVSSVLE 232

Query: 60  LELLLQNL 67
           L  LLQ++
Sbjct: 233 LPALLQSI 240

>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Leucine rich effector protein YopM
domain: Leucine rich effector protein YopM
species: Yersinia pestis [TaxId: 632]

 Score = 32.5 bits (72), Expect = 0.003
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 51  DLSNVRLKDLELLLQNLQQLNLPNN 75
             S   L ++  L QNL+QL++  N
Sbjct: 310 IASFNHLAEVPELPQNLKQLHVEYN 334

>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Leucine rich effector protein YopM
domain: Leucine rich effector protein YopM
species: Yersinia pestis [TaxId: 632]

 Score = 32.1 bits (71), Expect = 0.003
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 51 DLSNVRLKDLELLLQNLQQLNLPNN 75
          +L+N+ L  L  L  +L+ L    N
Sbjct: 44 ELNNLGLSSLPELPPHLESLVASCN 68

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	75
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.57
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.55
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.51
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.49
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.48
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.48
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.46
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.46
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.46
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.45
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.45
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.44
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.44
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.43
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.42
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.42
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.41
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.38
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.26
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.24
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.23
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.21
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.18
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.18
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.16
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.09
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.03
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	98.78
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.7
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.48
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.45
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.33
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.99
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.83
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.73
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	97.72
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.47
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.33
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.31
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.18
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.17
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	96.95
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	96.8
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	96.78
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	96.72
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	96.5
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	96.37
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	95.9
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	95.64
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	95.61
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	93.85
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	90.64
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	89.2
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	86.1
d2r7ka1	123	5-formaminoimidazole-4-carboxamide ribonucleotide	84.65
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	84.63
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	82.25

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.57  E-value=5e-15  Score=88.45  Aligned_cols=62  Identities=10%  Similarity=0.192  Sum_probs=52.8

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCCCHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLL   64 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~   64 (75)
                      .+++|++|+||||+.+|+++|++|||++|+|.++....+.+  ..++++++++.++ .+.|..++
T Consensus       164 ~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el-~~~l~~l~  227 (228)
T d2hcfa1         164 ANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET-DEVLASIL  227 (228)
T ss_dssp             CCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCH-HHHHHHHH
T ss_pred             cCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHH-HHHHHHHh
Confidence            47899999999999999999999999999999887665544  3689999999999 67766553

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.55  E-value=2.2e-15  Score=88.85  Aligned_cols=54  Identities=11%  Similarity=0.137  Sum_probs=48.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      +|++|++|+|||||.+|+++|++|||++|+|.+|......+  ..++++++++.|+
T Consensus       150 ~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el  205 (210)
T d2ah5a1         150 HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             hhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            68999999999999999999999999999999987766554  3589999999886

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.51  E-value=1.1e-14  Score=85.92  Aligned_cols=55  Identities=15%  Similarity=0.232  Sum_probs=49.3

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+|||||.+|+++|+++||++|++.+|.....+...++++++++.++
T Consensus       149 ~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dl  203 (207)
T d2hdoa1         149 KVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI  203 (207)
T ss_dssp             HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred             ceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHH
Confidence            3689999999999999999999999999999999887766667788999998877

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.49  E-value=1.8e-14  Score=85.51  Aligned_cols=61  Identities=25%  Similarity=0.354  Sum_probs=50.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch----hhh--hccceeeCCCCCCCHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE----QDF--KDAIAIYPDLSNVRLKDLELL   63 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~----~~~--~~~~~~~~~~~~l~~~~l~~~   63 (75)
                      +|++|++|+|||||..|+++|+++||++|+|.++....    ..+  ..++++++++.++ +..|..+
T Consensus       154 l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL-~~ll~~l  220 (222)
T d2fdra1         154 FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL-PAVIAAM  220 (222)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH-HHHHHHH
T ss_pred             hCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHH-HHHHHHh
Confidence            68999999999999999999999999999999876432    122  3589999999888 6665543

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=2.5e-14  Score=84.62  Aligned_cols=59  Identities=29%  Similarity=0.443  Sum_probs=50.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh-hhhccceeeCCCCCCCHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-DFKDAIAIYPDLSNVRLKDL   60 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~~l   60 (75)
                      +|++|++|+||||+..|+++|+++||++|+|.++..... ....++++++++.|+.++.|
T Consensus       157 l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~~~~l  216 (218)
T d1te2a_         157 LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDL  216 (218)
T ss_dssp             HTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHHH
T ss_pred             cCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCCHhhc
Confidence            689999999999999999999999999999987655433 34678999999999987654

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.48  E-value=1.4e-14  Score=88.37  Aligned_cols=55  Identities=16%  Similarity=0.325  Sum_probs=46.4

Q ss_pred             CCCCCCcEEEEecCHH-hHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCCC
Q 048682            2 LGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNVR   56 (75)
Q Consensus         2 l~~~p~~~l~igDs~~-di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l~   56 (75)
                      +|++|++|+|||||.. ||++|++|||++|+|.+|.......    ..||++++++.|+.
T Consensus       193 l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~  252 (253)
T d1wvia_         193 LGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD  252 (253)
T ss_dssp             HTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred             ccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence            5889999999999975 9999999999999999887554432    24699999999875

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.46  E-value=3.6e-14  Score=85.96  Aligned_cols=60  Identities=22%  Similarity=0.263  Sum_probs=47.0

Q ss_pred             CCCC-CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch----hh-------------------h--hccceeeCCCCCC
Q 048682            2 LGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE----QD-------------------F--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~-p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~----~~-------------------~--~~~~~~~~~~~~l   55 (75)
                      +|+. +++|+|||||.+||++|++|||.+|+|.+|....    ++                   +  .+++++++++.|+
T Consensus       169 l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL  248 (257)
T d1swva_         169 LGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQEL  248 (257)
T ss_dssp             HTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGH
T ss_pred             hCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHH
Confidence            5774 5899999999999999999999999999886421    10                   1  2489999999887


Q ss_pred             CHHHHHH
Q 048682           56 RLKDLEL   62 (75)
Q Consensus        56 ~~~~l~~   62 (75)
                       +..|..
T Consensus       249 -~~ii~~  254 (257)
T d1swva_         249 -ESVMEH  254 (257)
T ss_dssp             -HHHHHH
T ss_pred             -HHHHHH
Confidence             555544

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=2.5e-14  Score=84.28  Aligned_cols=55  Identities=18%  Similarity=0.326  Sum_probs=43.4

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++|++|++|+||||+..|+++|++|||++|+|..+.........+..++++|.||
T Consensus       171 ~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL  225 (225)
T d2g80a1         171 DIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL  225 (225)
T ss_dssp             HHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             hcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence            3689999999999999999999999999999975433222223456678988875

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.46  E-value=3.3e-14  Score=86.61  Aligned_cols=55  Identities=16%  Similarity=0.415  Sum_probs=47.3

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhh----ccceeeCCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVR   56 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~----~~~~~~~~~~~l~   56 (75)
                      +|++|++|+|||||+ +||++|++|||++|+|.+|......+.    .||++++++.||.
T Consensus       189 lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~  248 (250)
T d2c4na1         189 MQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID  248 (250)
T ss_dssp             HTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred             hcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence            689999999999997 599999999999999999876655442    4699999999874

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.45  E-value=4.6e-14  Score=83.62  Aligned_cols=60  Identities=28%  Similarity=0.387  Sum_probs=50.8

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHH
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL   64 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~   64 (75)
                      ++|++|++|||||||..|+++|+++||++|+|.++.    ........++++.+++++.|.+++
T Consensus       157 ~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~----~~~~~~~~~~~~~~~~~~~l~el~  216 (221)
T d1o08a_         157 AVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE----DLGDDIVIVPDTSHYTLEFLKEVW  216 (221)
T ss_dssp             HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH----HHCSSSEEESSGGGCCHHHHHHHH
T ss_pred             HcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh----hcccccEEcCCcccCCHHHHHHHH
Confidence            378999999999999999999999999999997642    334566788999999889888764

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.45  E-value=2.2e-14  Score=84.68  Aligned_cols=54  Identities=26%  Similarity=0.257  Sum_probs=47.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhh--hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l   55 (75)
                      ++++|++|+|||||.+|+++|+++||++|+|.+++.....+  ..++++++++.++
T Consensus       164 ~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL  219 (224)
T d2hsza1         164 FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI  219 (224)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             hhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHH
Confidence            57899999999999999999999999999999887654433  4688999999988

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.44  E-value=2.8e-14  Score=86.90  Aligned_cols=55  Identities=15%  Similarity=0.316  Sum_probs=46.4

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNVR   56 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l~   56 (75)
                      +|++|++|+||||+. +||++|++|||++|+|.+|.......    ..|+++++++.|++
T Consensus       193 ~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~  252 (253)
T d1yv9a1         193 LGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT  252 (253)
T ss_dssp             HCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred             hCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence            689999999999996 59999999999999998886544322    24799999999885

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=2.7e-14  Score=84.00  Aligned_cols=59  Identities=20%  Similarity=0.249  Sum_probs=47.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeE-EEEcCCCCchhhh-hccceeeCCCCCCCHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAIAIYPDLSNVRLKDLE   61 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~-i~v~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~   61 (75)
                      ++++|++|+|||||.+|+++|++|||.+ +++.+++...... ..++++++++.++ ++.|+
T Consensus       121 ~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl-~~~ik  181 (182)
T d2gmwa1         121 LHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL-PQAIK  181 (182)
T ss_dssp             HTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH-HHHHH
T ss_pred             cccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHH-HHHhc
Confidence            5789999999999999999999999975 6787776544333 4589999999888 55543

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.43  E-value=9.7e-14  Score=82.94  Aligned_cols=60  Identities=17%  Similarity=0.254  Sum_probs=50.5

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHH
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   62 (75)
                      +|++|++|+||||+. +|+++|+++||++|++.++.........++++++++.++ ++.|++
T Consensus       168 l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el-~~~l~~  228 (230)
T d1x42a1         168 AGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV-IKIVDE  228 (230)
T ss_dssp             HTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHH-HHHHHH
T ss_pred             hcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHH-HHHHHH
Confidence            689999999999985 799999999999999987665554556789999999888 666655

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.42  E-value=3e-14  Score=86.86  Aligned_cols=54  Identities=17%  Similarity=0.424  Sum_probs=45.7

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCchhhh----hccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~~~~----~~~~~~~~~~~~l   55 (75)
                      +|++|++|+||||+. +||++|++|||++|+|.+|.......    ..|+++++++.++
T Consensus       198 l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL  256 (261)
T d1vjra_         198 FGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL  256 (261)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred             hccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence            689999999999996 69999999999999999987655433    2469999998766

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.5e-14  Score=83.43  Aligned_cols=54  Identities=20%  Similarity=0.270  Sum_probs=44.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch--hhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE--QDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~--~~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|+||||+.+|+.+|++|||++|+|..+....  .....++.+++|+.||
T Consensus       197 ~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         197 IGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL  252 (253)
T ss_dssp             HTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             hCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence            68999999999999999999999999999997543322  2335567789999886

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.41  E-value=3.3e-14  Score=83.98  Aligned_cols=54  Identities=15%  Similarity=0.076  Sum_probs=44.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh-hhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-DFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l   55 (75)
                      +|++|++|+||||+..|+++|++|||++|+|..+..... ....++++++++.++
T Consensus       162 ~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el  216 (220)
T d1zrna_         162 LGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV  216 (220)
T ss_dssp             HTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             hCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHH
Confidence            689999999999999999999999999999975543322 234578999987765

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.38  E-value=1.7e-13  Score=81.87  Aligned_cols=60  Identities=15%  Similarity=0.206  Sum_probs=45.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCch-----------------------hh-hhccceeeCCCCCCCH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE-----------------------QD-FKDAIAIYPDLSNVRL   57 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~-----------------------~~-~~~~~~~~~~~~~l~~   57 (75)
                      +|++|++|+||||+..||++|++|||++|+|..+....                       .. ...++++++++.++ +
T Consensus       160 lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el-~  238 (245)
T d1qq5a_         160 LGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDL-P  238 (245)
T ss_dssp             HCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGH-H
T ss_pred             hCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHH-H
Confidence            68999999999999999999999999999996432110                       00 12478899998888 5


Q ss_pred             HHHHH
Q 048682           58 KDLEL   62 (75)
Q Consensus        58 ~~l~~   62 (75)
                      +.++.
T Consensus       239 ~lv~~  243 (245)
T d1qq5a_         239 RLVRG  243 (245)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            55543

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.26  E-value=1.6e-12  Score=83.71  Aligned_cols=61  Identities=21%  Similarity=0.271  Sum_probs=49.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchh---hh--hccceeeCCCCCCCHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ---DF--KDAIAIYPDLSNVRLKDLELL   63 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~---~~--~~~~~~~~~~~~l~~~~l~~~   63 (75)
                      +++++++|+||||+.+|+.+|++||+++|+|.+|.....   ++  ..++++++++.++ ...|.++
T Consensus       311 ~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el-~~il~~l  376 (380)
T d1qyia_         311 NIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL-RGVLDNL  376 (380)
T ss_dssp             TCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGH-HHHHSCT
T ss_pred             hCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHH-HHHHHHH
Confidence            567899999999999999999999999999998875432   22  3689999999887 4555443

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.24  E-value=5.4e-12  Score=75.90  Aligned_cols=62  Identities=24%  Similarity=0.278  Sum_probs=44.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHHHHHHHhh
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNLQQ   69 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~   69 (75)
                      +++++++|+||||+.+|+++|++|||++|++.+++...    .+++.+.++.++  ..+..+++.++.
T Consensus       142 ~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~----~~~~~~~~~~~~--~e~~dll~~v~~  203 (209)
T d2o2xa1         142 LALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV----QPGFAIRPLRDS--SELGDLLAAIET  203 (209)
T ss_dssp             HTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE----ETTEEEEEESSH--HHHHHHHHHHHH
T ss_pred             hCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcc----cCCccccCccch--hHHHHHHHHHHH
Confidence            57899999999999999999999999999998876432    134444554443  334444554443

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=4.1e-12  Score=76.08  Aligned_cols=63  Identities=17%  Similarity=0.242  Sum_probs=46.9

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHHHcCCeEEEEcCCCCch--hhhhccceeeCCCCCCCHHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAE--QDFKDAIAIYPDLSNVRLKDLELLLQ   65 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~~AG~~~i~v~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~   65 (75)
                      +|++|++|+||||+. +|+.+|+++||+++.+..+....  .....+++++.++.++ ++.|+++..
T Consensus       177 ~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL-~~ll~~i~~  242 (247)
T d2gfha1         177 LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL-PALLQSIDC  242 (247)
T ss_dssp             HTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH-HHHHHHHTT
T ss_pred             hhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHH-HHHHHHHhh
Confidence            588999999999996 89999999999976554333222  2235678999998887 666665443

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=3.2e-12  Score=73.72  Aligned_cols=37  Identities=14%  Similarity=0.286  Sum_probs=34.6

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCc
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA   38 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~   38 (75)
                      +|++|++|+|||||..|+++|+++||++|+|.+|.+.
T Consensus       111 ~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~  147 (164)
T d1u7pa_         111 TGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSL  147 (164)
T ss_dssp             HCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCCCH
T ss_pred             hCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCh
Confidence            6899999999999999999999999999999998753

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.18  E-value=3.6e-12  Score=72.83  Aligned_cols=35  Identities=17%  Similarity=0.394  Sum_probs=32.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +|++|++|+|||||.+|+++|+++||++|+|..+.
T Consensus       154 ~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~  188 (197)
T d2b0ca1         154 EGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT  188 (197)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred             cCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence            58999999999999999999999999999997654

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.18  E-value=6e-12  Score=73.70  Aligned_cols=48  Identities=10%  Similarity=0.237  Sum_probs=39.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      ++++|++|+||||+.+|+++|+++||++|++.++..      .+++.++++.++
T Consensus       150 ~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~------~~~~~~~~~~dl  197 (204)
T d2go7a1         150 YQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY------EGNHRIQALADI  197 (204)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC------TTEEECSSTTHH
T ss_pred             hCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC------CcCeecCCHHHH
Confidence            588999999999999999999999999999987642      245667776655

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=1e-11  Score=72.06  Aligned_cols=36  Identities=14%  Similarity=0.220  Sum_probs=30.9

Q ss_pred             CCCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            1 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         1 ~l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +++++|++|+||||+.+|+++|++|||++|++....
T Consensus       116 ~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~  151 (161)
T d2fpwa1         116 EQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  151 (161)
T ss_dssp             ---CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             hcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence            468999999999999999999999999999986654

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=1e-11  Score=73.02  Aligned_cols=36  Identities=17%  Similarity=0.322  Sum_probs=33.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST   37 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~   37 (75)
                      ++++|++||||||+..|+++|+++||++|+|.++..
T Consensus       170 ~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~  205 (222)
T d1cr6a1         170 LKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTAS  205 (222)
T ss_dssp             HTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSH
T ss_pred             hCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcch
Confidence            589999999999999999999999999999977653

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=4e-11  Score=69.80  Aligned_cols=35  Identities=20%  Similarity=0.339  Sum_probs=32.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +|++|++|+||||+..|+++|+++||++|+|.++.
T Consensus       172 ~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~  206 (225)
T d1zd3a1         172 LKASPSEVVFLDDIGANLKPARDLGMVTILVQDTD  206 (225)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred             cccCccceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence            58999999999999999999999999999997653

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.78  E-value=1.2e-09  Score=63.23  Aligned_cols=32  Identities=22%  Similarity=0.270  Sum_probs=28.3

Q ss_pred             CCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            5 SEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         5 ~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      .+++|+|||||..|+++|+++||++|++.++.
T Consensus       148 ~~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~  179 (187)
T d2fi1a1         148 QISSGLVIGDRPIDIEAGQAAGLDTHLFTSIV  179 (187)
T ss_dssp             TCSSEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred             CCCCeEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence            35679999999999999999999999987643

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.70  E-value=4.2e-10  Score=66.43  Aligned_cols=58  Identities=17%  Similarity=0.198  Sum_probs=36.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE   61 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   61 (75)
                      +++++++|+|||||.+|+.+|++||+. +++.+..........+...++++.++ ...++
T Consensus       157 ~~~~~~~~i~iGDs~~Dl~~a~~A~~~-~a~~~~~~~~~~~~~~~~~~~d~~~i-~~~l~  214 (226)
T d2feaa1         157 LSEPNQYIIMIGDSVTDVEAAKLSDLC-FARDYLLNECREQNLNHLPYQDFYEI-RKEIE  214 (226)
T ss_dssp             HCCTTCEEEEEECCGGGHHHHHTCSEE-EECHHHHHHHHHTTCCEECCSSHHHH-HHHHH
T ss_pred             hcCCCceEEEEeCchhhHHHHHHCCEE-EEecchHHHHHHcCCCeeecCCHHHH-HHHHH
Confidence            468899999999999999999999963 33322111111112334556777666 34443

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.48  E-value=4.4e-08  Score=56.18  Aligned_cols=47  Identities=17%  Similarity=0.108  Sum_probs=36.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL   52 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~   52 (75)
                      ++++|++|++||||.+|+.+++.||+.+ ++ ++.  ......+++++++.
T Consensus       154 ~~~~~~~~i~iGDs~nDi~m~~~ag~~v-a~-na~--~~lk~~Ad~vi~~~  200 (210)
T d1j97a_         154 EGINLEDTVAVGDGANDISMFKKAGLKI-AF-CAK--PILKEKADICIEKR  200 (210)
T ss_dssp             HTCCGGGEEEEESSGGGHHHHHHCSEEE-EE-SCC--HHHHTTCSEEECSS
T ss_pred             hcccccceEEecCCcChHHHHHHCCCCE-EE-CCC--HHHHHhCCEEEcCC
Confidence            4688999999999999999999999864 44 332  22235678888765

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=5.4e-08  Score=57.70  Aligned_cols=51  Identities=14%  Similarity=0.079  Sum_probs=37.5

Q ss_pred             CCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            4 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         4 ~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      .++++|++||||.+|+.+++.||+. |++............+++++.+|.++
T Consensus       165 ~~~~~~~~vGDs~~Di~~~~~ag~~-va~~~~~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         165 FHFKKIIMIGDGATDMEACPPADAF-IGFGGNVIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             HCCSCEEEEESSHHHHTTTTTSSEE-EEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred             cCccccEEEEeCHhhHHHHHhCCce-EEECCCHHHHHHHHhCCCEeCCHHHh
Confidence            4678999999999999999999986 45542222222224678899998876

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.33  E-value=2.3e-07  Score=51.52  Aligned_cols=28  Identities=18%  Similarity=0.296  Sum_probs=25.7

Q ss_pred             EEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            9 CLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         9 ~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      ++||||+..|+++|+++|++++.|.+|.
T Consensus       121 ~~~igD~~~dv~a~~~~Gi~~~~V~~Gd  148 (149)
T d1ltqa1         121 KLAIDDRTQVVEMWRRIGVECWQVASGD  148 (149)
T ss_dssp             EEEEECCHHHHHHHHHTTCCEEECSCCC
T ss_pred             EEEEcCCHHHHHHHHHCCCcEEEeCCCC
Confidence            5789999999999999999999998873

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.99  E-value=3.6e-06  Score=48.60  Aligned_cols=62  Identities=19%  Similarity=0.131  Sum_probs=41.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC-CHHHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV-RLKDLELLLQN   66 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~~   66 (75)
                      ++++++++++|||+.||+.+.+.||.. |++.++.  ..-...++++..+..+- -.+.+..++++
T Consensus       164 ~~i~~~~~~~iGD~~NDi~ml~~ag~~-vav~na~--~~~k~~A~~v~~~~~~~gv~~~i~~~l~~  226 (230)
T d1wr8a_         164 LGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQAP--KILKENADYVTKKEYGEGGAEAIYHILEK  226 (230)
T ss_dssp             HTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTSC--HHHHTTCSEECSSCHHHHHHHHHHHHHHH
T ss_pred             cccchhheeeeecCccHHHHHHHCCeE-EEECCCC--HHHHHhCCEEECCCCcCHHHHHHHHHHHH
Confidence            578999999999999999999999974 5554432  22234577777654321 14445555543

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.83  E-value=9.4e-06  Score=47.39  Aligned_cols=49  Identities=8%  Similarity=-0.075  Sum_probs=36.7

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS   53 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~   53 (75)
                      +|+++++|++||||.+|+.+...+|.. |++.++.  ..-...++++.++..
T Consensus       163 ~~i~~~~v~~~GDs~nD~~m~~~a~~~-vav~na~--~~~k~~ad~v~~~~~  211 (225)
T d1l6ra_         163 YSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANAT--DNIKAVSDFVSDYSY  211 (225)
T ss_dssp             TTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTSC--HHHHHHCSEECSCCT
T ss_pred             hccchhheeeecCCcchHHHHHHCCeE-EEECCCc--HHHHHhCCEEECCCC
Confidence            689999999999999999999999964 4554432  222345788776655

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=2e-05  Score=46.83  Aligned_cols=61  Identities=15%  Similarity=0.067  Sum_probs=43.1

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC-CHHHHHHHHH
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV-RLKDLELLLQ   65 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~   65 (75)
                      +|++++++++||||.+|+.+-..+|..++ +.++.  ..-...++++..+..+= ..+.|++++.
T Consensus       202 lgi~~~~vi~~GD~~ND~~Ml~~ag~~va-m~Na~--~~lk~~A~~v~~~~~~~Gva~~i~~~l~  263 (269)
T d1rlma_         202 WDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGNAA--ENIKQIARYATDDNNHEGALNVIQAVLD  263 (269)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTTCC--HHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred             hccccccEEEEcCCcchHHHHHhCCeEEE-eCCCC--HHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence            68899999999999999999999997654 54432  22235677877765542 1455566555

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.72  E-value=3.9e-06  Score=47.63  Aligned_cols=30  Identities=10%  Similarity=-0.015  Sum_probs=26.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEE
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVI   31 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~   31 (75)
                      +++++++|++|||+.+|+.+.+.||+...+
T Consensus       141 ~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm  170 (206)
T d1rkua_         141 FKSLYYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             HHHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             hcccccceEEecCCccCHHHHHhCCccEEE
Confidence            356889999999999999999999987543

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.47  E-value=0.00011  Score=43.59  Aligned_cols=50  Identities=22%  Similarity=0.082  Sum_probs=37.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      +|++++++++|||+.||+.+-+.||.. |++.++.  .+....++++..+..+
T Consensus       225 ~gi~~~~vi~~GD~~ND~~Ml~~a~~s-vam~na~--~~~k~~A~~v~~~~~~  274 (285)
T d1nrwa_         225 LNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGNAR--EDIKSIADAVTLTNDE  274 (285)
T ss_dssp             TTCCGGGEEEEESSGGGHHHHHHSSEE-EECTTCC--HHHHHHCSEECCCGGG
T ss_pred             cccCcccEEEEeCCHHHHHHHHhCCeE-EEeCCCC--HHHHHhCCEEcCCCCc
Confidence            689999999999999999999999955 4565543  2233567777776543

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=4.6e-05  Score=43.72  Aligned_cols=32  Identities=16%  Similarity=-0.002  Sum_probs=27.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYT   34 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~   34 (75)
                      +|++++++++|||+.+|+.+-+.||. .|+|.+
T Consensus       199 l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n  230 (232)
T d1xvia_         199 LSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKG  230 (232)
T ss_dssp             HHSSCCEEEEEESSGGGHHHHHTSSE-EEECCC
T ss_pred             cCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeC
Confidence            47899999999999999999999997 455644

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.31  E-value=7.9e-05  Score=44.16  Aligned_cols=49  Identities=14%  Similarity=0.126  Sum_probs=36.5

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS   53 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~   53 (75)
                      +|++++++++||||.+|+.+-+.+|.. |++.++.  ..-...++++..+..
T Consensus       198 ~~i~~~~~~a~GD~~ND~~Ml~~a~~s-vav~na~--~~lk~~A~~vt~~~~  246 (260)
T d2rbka1         198 FGIKLEETMSFGDGGNDISMLRHAAIG-VAMGQAK--EDVKAAADYVTAPID  246 (260)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSC--HHHHHHSSEECCCGG
T ss_pred             ccccHhheeEecCCcccHHHHHhCCeE-EEeCCCC--HHHHHhCCEEeCCCC
Confidence            588999999999999999999999985 5665543  222245677666543

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.18  E-value=0.00066  Score=39.89  Aligned_cols=49  Identities=16%  Similarity=0.182  Sum_probs=36.0

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS   53 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~   53 (75)
                      ++++++++++|||+.+|+.+-..+|.. |++.++.  ......++++..+-.
T Consensus       219 ~~i~~~~vi~~GD~~ND~~Ml~~a~~~-va~~na~--~~~k~~a~~v~~~~~  267 (283)
T d2b30a1         219 YNISNDQVLVVGDAENDIAMLSNFKYS-FAVANAT--DSAKSHAKCVLPVSH  267 (283)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCC--HHHHHHSSEECSSCT
T ss_pred             cccccceEEEecCChhhHHHHHhCCcE-EEeCCCC--HHHHHhCCEEECCcC
Confidence            678899999999999999999999965 4454443  222345677775543

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.17  E-value=0.0002  Score=42.49  Aligned_cols=50  Identities=14%  Similarity=0.104  Sum_probs=37.9

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      ++++++++++|||+.+|+.+-..+|.. |++.++.  ......++++..+..+
T Consensus       202 ~~i~~~~vva~GD~~ND~~ml~~~~~s-va~~na~--~~~k~~A~~i~~~~~~  251 (267)
T d1nf2a_         202 MNWKKEEIVVFGDNENDLFMFEEAGLR-VAMENAI--EKVKEASDIVTLTNND  251 (267)
T ss_dssp             HTCCGGGEEEEECSHHHHHHHTTCSEE-EECTTSC--HHHHHHCSEECCCTTT
T ss_pred             hccCcccEEEEcCCcchHHHHHhCCcE-EEeCCCC--HHHHHhCCEEcCCCCc
Confidence            578999999999999999999999975 5554432  2233567888777665

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.00073  Score=39.70  Aligned_cols=50  Identities=16%  Similarity=0.125  Sum_probs=36.4

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN   54 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~   54 (75)
                      ++++++++++|||+.+|+.+-+.+|.. +++.++.  .+....++++..+..+
T Consensus       209 ~~i~~~~ii~~GD~~ND~~ml~~~~~~-~am~na~--~~lk~~a~~i~~~~~~  258 (271)
T d1rkqa_         209 LGIKPEEIMAIGDQENDIAMIEYAGVG-VAVDNAI--PSVKEVANFVTKSNLE  258 (271)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSC--HHHHHHCSEECCCTTT
T ss_pred             cccchhcEEEEeCcHhHHHHHHhCCcE-EEeCCCC--HHHHHhCCEEcCCCCc
Confidence            478899999999999999999999954 4454332  2223456777776554

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.80  E-value=0.00037  Score=40.80  Aligned_cols=28  Identities=25%  Similarity=0.272  Sum_probs=24.6

Q ss_pred             CCCCCcEEEEecC-----------------HHhHHHHHHcCCeEE
Q 048682            3 GISEKDCLVVEDS-----------------VIGLQAATRAGMACV   30 (75)
Q Consensus         3 ~~~p~~~l~igDs-----------------~~di~aA~~AG~~~i   30 (75)
                      +++.++++||||.                 .+|++.|+++|++..
T Consensus       134 ~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         134 PISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             CCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             cCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            4788999999994                 499999999999964

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=96.78  E-value=0.00095  Score=38.26  Aligned_cols=49  Identities=10%  Similarity=0.114  Sum_probs=35.2

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS   53 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~   53 (75)
                      +++++++|+||||..+|+.+-+.+|...+ ..+..  ......++++..+-.
T Consensus        92 ~~i~~~~v~~vGDd~nDl~~l~~~g~sia-p~nA~--~~vk~~A~~Vt~~~G  140 (177)
T d1k1ea_          92 AGVTAEQTAYIGDDSVDLPAFAACGTSFA-VADAP--IYVKNAVDHVLSTHG  140 (177)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTSC--HHHHTTSSEECSSCT
T ss_pred             hcCCcceeEEecCCccHHHHHhhCCeEEE-cCCcc--HHHHHhCCEEeCCCC
Confidence            57899999999999999999999997543 33332  222345677665543

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.72  E-value=0.00035  Score=40.76  Aligned_cols=34  Identities=21%  Similarity=0.203  Sum_probs=28.3

Q ss_pred             CCCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      +|+++++|++|||+.+|+.+-+.+|.. |++.+..
T Consensus       174 ~gi~~~~~v~~GD~~ND~~Ml~~~~~~-vav~na~  207 (244)
T d1s2oa1         174 LAMEPSQTLVCGDSGNDIGLFETSARG-VIVRNAQ  207 (244)
T ss_dssp             TTCCGGGEEEEECSGGGHHHHTSSSEE-EECTTCC
T ss_pred             ccCChhhEEEEcCCCCCHHHHhhCCcE-EEeCCCC
Confidence            688999999999999999999999954 4565443

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.0019  Score=38.15  Aligned_cols=27  Identities=19%  Similarity=0.145  Sum_probs=24.1

Q ss_pred             EEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            9 CLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         9 ~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      .+++||..+|+.+|++||+++|-|...
T Consensus       159 ~l~~GD~l~Df~aA~eagi~~iRi~r~  185 (209)
T d2b82a1         159 RIFYGDSDNDITAARDVGARGIRILRA  185 (209)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred             EEEecCCHHHHhHHHHcCCCceEeecc
Confidence            579999999999999999999988543

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.37  E-value=0.0011  Score=38.05  Aligned_cols=32  Identities=13%  Similarity=0.060  Sum_probs=26.6

Q ss_pred             CCCCCcEEEEecCHHhHHHHHHcCCeEEEEcCC
Q 048682            3 GISEKDCLVVEDSVIGLQAATRAGMACVITYTS   35 (75)
Q Consensus         3 ~~~p~~~l~igDs~~di~aA~~AG~~~i~v~~~   35 (75)
                      +..+++|++|||+.||+.+=..||.. |++.++
T Consensus       193 ~~~~~~~~a~GD~~ND~~Ml~~a~~~-va~~Na  224 (243)
T d1wzca1         193 RLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSL  224 (243)
T ss_dssp             TTSCEEEEEEECSGGGHHHHTTSSEE-EEESSC
T ss_pred             CCCcccEEEEcCCHhHHHHHHcCCcE-EEeCCC
Confidence            36788999999999999999999954 556554

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.90  E-value=0.0078  Score=33.83  Aligned_cols=45  Identities=13%  Similarity=0.052  Sum_probs=31.4

Q ss_pred             CCcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            6 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         6 p~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      .+++++||||.+|+.+=..+|.. ++|..+..    ...+.+.+++..++
T Consensus       170 ~~~~i~~GDs~ND~~Mf~~~~~~-~av~~g~~----~~~A~~~~~~~~ev  214 (229)
T d1u02a_         170 ERPAIIAGDDATDEAAFEANDDA-LTIKVGEG----ETHAKFHVADYIEM  214 (229)
T ss_dssp             TSCEEEEESSHHHHHHHHTTTTS-EEEEESSS----CCCCSEEESSHHHH
T ss_pred             cccceeecCCCChHHHHhccCCe-EEEEeCCC----CccCeEEcCCHHHH
Confidence            46899999999999998888753 33333321    13567888887764

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0024  Score=36.28  Aligned_cols=33  Identities=9%  Similarity=-0.170  Sum_probs=26.6

Q ss_pred             CCCCCCcEEEEec----CHHhHHHHHHcCCeEEEEcC
Q 048682            2 LGISEKDCLVVED----SVIGLQAATRAGMACVITYT   34 (75)
Q Consensus         2 l~~~p~~~l~igD----s~~di~aA~~AG~~~i~v~~   34 (75)
                      ++.+++++++|||    +.||+.+-+.+|...+++..
T Consensus       194 ~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         194 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            4678899999999    67999999999977777654

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0052  Score=34.67  Aligned_cols=33  Identities=3%  Similarity=-0.150  Sum_probs=28.2

Q ss_pred             CCCCCcEEEEecCH----HhHHHHHHcCCeEEEEcCC
Q 048682            3 GISEKDCLVVEDSV----IGLQAATRAGMACVITYTS   35 (75)
Q Consensus         3 ~~~p~~~l~igDs~----~di~aA~~AG~~~i~v~~~   35 (75)
                      +.+++++++|||+.    ||+++=..||...++|.++
T Consensus       195 ~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na  231 (244)
T d2fuea1         195 QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP  231 (244)
T ss_dssp             TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH
T ss_pred             cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCH
Confidence            45789999999986    9999999999888877653

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.012  Score=33.26  Aligned_cols=47  Identities=9%  Similarity=0.007  Sum_probs=36.6

Q ss_pred             EEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeCCCCCC
Q 048682            9 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV   55 (75)
Q Consensus         9 ~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~~~~~l   55 (75)
                      -++|+|++.-+.+..++|+++|.+..++............+.+..|+
T Consensus       139 d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~  185 (195)
T d1q92a_         139 DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADD  185 (195)
T ss_dssp             SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSC
T ss_pred             eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHH
Confidence            38999999999999999999998877775432223345778999887

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=90.64  E-value=0.11  Score=33.73  Aligned_cols=35  Identities=11%  Similarity=0.208  Sum_probs=28.3

Q ss_pred             CCCCCCcEEEEecCH-HhHHHHH-HcCCeEEEEcCCC
Q 048682            2 LGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYTSS   36 (75)
Q Consensus         2 l~~~p~~~l~igDs~-~di~aA~-~AG~~~i~v~~~~   36 (75)
                      +|..-.+++||||+. .||..++ ..|.+|++|...-
T Consensus       290 lg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL  326 (458)
T d2bdea1         290 LGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL  326 (458)
T ss_dssp             TTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred             hCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence            466677999999997 7977775 6899999997543

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.20  E-value=0.046  Score=33.30  Aligned_cols=22  Identities=18%  Similarity=0.244  Sum_probs=18.7

Q ss_pred             CCCcEEEEecCHHhHHHHHHcC
Q 048682            5 SEKDCLVVEDSVIGLQAATRAG   26 (75)
Q Consensus         5 ~p~~~l~igDs~~di~aA~~AG   26 (75)
                      +..++|+||||.+|+.+|..+.
T Consensus       223 ~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         223 DNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             TCCEEEEEESSSGGGGTTTTCS
T ss_pred             CcCcEEEEeCCHhHHHHHhCCc
Confidence            3567999999999999998764

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.10  E-value=0.55  Score=25.11  Aligned_cols=41  Identities=12%  Similarity=0.120  Sum_probs=24.4

Q ss_pred             CcEEEEecCHHhHHHHHHcCCeEEEEcCCCCchhhhhccceeeC
Q 048682            7 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP   50 (75)
Q Consensus         7 ~~~l~igDs~~di~aA~~AG~~~i~v~~~~~~~~~~~~~~~~~~   50 (75)
                      ..+.|+||..+|..+-+.|++. |++..+.  ......++.++.
T Consensus        83 ~~v~~vGDg~nD~~aL~~Advg-ia~~~~~--~~~~~aADivl~  123 (135)
T d2b8ea1          83 EVVAFVGDGINDAPALAQADLG-IAVGSGS--DVAVESGDIVLI  123 (135)
T ss_dssp             SCEEEEECSSSSHHHHHHSSEE-EEECCC----------SEEES
T ss_pred             CEEEEEeCCCCcHHHHHhCCee-eecCccC--HHHHHhCCEEEE
Confidence            4577999999999999999865 3343322  112234566553

>d2r7ka1 c.30.1.8 (A:1-123) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: PurP N-terminal domain-like
domain: 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=84.65  E-value=1.2  Score=23.75  Aligned_cols=57  Identities=19%  Similarity=0.289  Sum_probs=37.8

Q ss_pred             hHHHHHHcCCeEEEEcCCCCch--hhhhccc--eeeCCCCCCCHHHHHHHHHHHhhccCCC
Q 048682           18 GLQAATRAGMACVITYTSSTAE--QDFKDAI--AIYPDLSNVRLKDLELLLQNLQQLNLPN   74 (75)
Q Consensus        18 di~aA~~AG~~~i~v~~~~~~~--~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~~~~   74 (75)
                      =+.+|+.-|.+|++|.......  ..+..+|  .+++++.++.-+..+..+...+..-+|+
T Consensus        32 Il~GAk~EGF~Tv~ic~kgR~~~Y~~f~~~De~i~~d~f~di~~~~~qe~L~~~N~I~IPh   92 (123)
T d2r7ka1          32 ILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVDNFSDIKNEEIQEKLRELNSIVVPH   92 (123)
T ss_dssp             HHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECSSGGGGGSHHHHHHHHHTTEEECCB
T ss_pred             HhhhHHHcCCcEEEEecCCCcchhhhccccceEEEeccHHHHhhHHHHHHHHHCCEEEecC
Confidence            4578999999999997543322  2233344  4689999985556666666666665664

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.63  E-value=0.59  Score=28.39  Aligned_cols=51  Identities=18%  Similarity=0.096  Sum_probs=30.6

Q ss_pred             EEEEecCHHhHHHHHHc---CCeEEEEcCCCCchhhhhccceeeCCCCCCCHHHHHH
Q 048682            9 CLVVEDSVIGLQAATRA---GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL   62 (75)
Q Consensus         9 ~l~igDs~~di~aA~~A---G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   62 (75)
                      .++||||.+|+++-+.+   |--.|.+.+   +...+..++..+-+.....+.-+-.
T Consensus       202 ~~~VGDSITDve~Lr~~r~~gGlaIsFNG---N~Yal~eA~VaiiS~~~~a~~~i~d  255 (308)
T d1y8aa1         202 PVVVGDSISDYKMFEAARGLGGVAIAFNG---NEYALKHADVVIISPTAMSEAKVIE  255 (308)
T ss_dssp             CEEEECSGGGHHHHHHHHHTTCEEEEESC---CHHHHTTCSEEEECSSTHHHHHHHH
T ss_pred             ceeccCccccHHHHHHHhcCCCeeEEecC---ccccccccceEEeccchhHHHHHHH
Confidence            48999999998876555   333444432   2234566777666666554333333

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=82.25  E-value=3.7  Score=24.96  Aligned_cols=29  Identities=21%  Similarity=0.176  Sum_probs=25.1

Q ss_pred             cEEEEecCHHhHHHHHHcCCeEEEEcCCC
Q 048682            8 DCLVVEDSVIGLQAATRAGMACVITYTSS   36 (75)
Q Consensus         8 ~~l~igDs~~di~aA~~AG~~~i~v~~~~   36 (75)
                      ..++||||-.+++-|-..|.++|-+....
T Consensus       272 s~~vignSssgi~Ea~~lg~P~Inir~~~  300 (373)
T d1v4va_         272 SLLLVTDSGGLQEEGAALGVPVVVLRNVT  300 (373)
T ss_dssp             EEEEEESCHHHHHHHHHTTCCEEECSSSC
T ss_pred             ceeEecccchhhhcchhhcCcEEEeCCCc
Confidence            46789999999999999999999886533