Citrus Sinensis ID: 048777


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------
MRESEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLEDGNSILKSGEVFRSAPSGSSITEQMIDKAEKKLKNLAVLDDSDCDELREVNCSDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRRFRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEINDTILSTGSEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKNLKKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNNLTKDCKDGVGYC
cccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEccccccccccHHHHHHHHcccccccEEccccEEEccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEcccccccccccccEEccccccccccccccccccEEEEEEcccccEEEEEcccccccccccccccccccccccccccEEEccccccccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccEEccccccccccEEEEcHHHHHHHHHHHHHccccEEEEEEEEEEEEcccccccccEEEEEcccccccccccEEEEccccccccccHHHHHHccHHHHHHHHHHHccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHcccccEEEEEEccccccccccccccEEEEEcccHHHHHHccccHHHHHHHHcccccccccccEEEEEEHEEEEcccEEEEEccccccccccccccc
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccEEEcccccccccccccccHHHccccHHHHcccHHccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccccccccEEEEEcccccccccHHcccEEEEEEEccccEEEEEEcccccccccccccccccccccccccccccccccccHHHccccccccccHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHcEEccccEEEccccccccccccccccEEEEcHHHHHcHHHHHccccHHccHHHHHHHccccEEEEEEEEEEEEcccHHHccccEEEEcccccccccEEEEEEcccccHHEcccHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHccccccccccccccHHHHHHHHHHHcccccEEEEEccccccccccHHHHHccEEEcccHHHHHcccHHHHHHHHHHcccccEccccHHHHHHHHHHHHHcHHHHHHHHccccccccccccc
MRESEPIGQMFIRLISNLCFSVFVFSVLIFTVIAityqppdpwlestSALTKFFsktenptledgnsilksgevfrsapsgssiTEQMIDKAEKKLKNlavlddsdcdelrevncsdprVLLAVERFNLKQFKSVLFLEyltpvngskanecDVAWRFRSKRDKSWRKYKDFRRFRFeygedcfyrvehasgwhsginAKRLFRrrvngtrsagnTIVSKAilddeindtilstgseadfkegkylyykrggdyckgMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAakynpsnqdvdgkdfryyfdfEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYkvkpknlkkdnstiiwrqfdapspgnfwfMVCDREAAKYIERPWHALLKSKILLNIVAEIGgrmdyeydAIHVVrgervknkklwpnldsdtspgaLLEKLEEVVHpwtnlyiatnepsynyfDTLRSEYKVHLLDDYRDLWNSTSEWYHWMtrltrgrpvefdgymrAIVDTEVFYRGKIRLETFNNLTkdckdgvgyc
MRESEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLEDGNSILKSGEVFRSAPSGSSITEQMIDKAEKKLKNLAVLDDSDCDELREVNCSDPRVLLAVERFNLKQFKSVLFLEyltpvngskanecdvawrfrskrdkswrkyKDFRRFRFEYGEDCFYRVehasgwhsginakrlfrrrvngtrsagntivskailddeindtilstgseadfkegKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKynpsnqdvdgKDFRYYFDFEHLKDVASVVEEGEFLRewkkwdqkhekkvsvkkvvsykvkpknlkkdnstiiwrqfdapspgnFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEYDAIHVVRgervknkklwpnldSDTSPGALLEKLEEVVHPWTNLyiatnepsynYFDTLRSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVfyrgkirletfnnltkdckdgvgyc
MRESEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLEDGNSILKSGEVFRSAPSGSSITEQMIDKAEKKLKNLAVLDDSDCDELREVNCSDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRRFRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEINDTILSTGSEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEkkvsvkkvvsykvkpkNLKKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNNLTKDCKDGVGYC
*******GQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFF********************************************LAVLDDSDCDELREVNCSDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRRFRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEINDTILSTGSEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKNLKKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNNLTKDCKDG****
*********MFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLEDGNSILKSGEV*********************************DELREVNCSDPRVLLAVERFNLKQFKSVLFLEYLTPVNG*KANECDVAWRFRSKRDKSWRKYKDFRRFRFEYGEDCFYRVEHASG*************************VSKAILDDEIN****************YLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLA*************DFRYYFDFEHLKDVASVVEEGEFLREWKKWDQ*HE*****KKVV*YKVK****KKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNNLTKDC*DGVG*C
MRESEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLEDGNSILKSGEVFRSAPSGSSITEQMIDKAEKKLKNLAVLDDSDCDELREVNCSDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRRFRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEINDTILSTGSEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKNLKKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNNLTKDCKDGVGYC
****EPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLEDGNSILKSGEVFRSAPSGSSITE**I*K**************DCDELREVNCSDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRRFRFEYGEDCFYRVEHASGWHS************************KAILDDEINDTILSTGSEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKNLKKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNNLTKDCKDGVGYC
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRESEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLEDGNSILKSGEVFRSAPSGSSITEQMIDKAEKKLKNLAVLDDSDCDELREVNCSDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRRFRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEINDTILSTGSEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKNLKKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNNLTKDCKDGVGYC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
225435743558 PREDICTED: uncharacterized protein LOC10 0.989 0.969 0.664 0.0
147838656558 hypothetical protein VITISV_022864 [Viti 0.989 0.969 0.664 0.0
449452686557 PREDICTED: uncharacterized protein LOC10 0.992 0.974 0.662 0.0
297746466586 unnamed protein product [Vitis vinifera] 0.961 0.897 0.649 0.0
255572288565 conserved hypothetical protein [Ricinus 0.990 0.959 0.65 0.0
297813343557 hypothetical protein ARALYDRAFT_489778 [ 0.992 0.974 0.632 0.0
356510951573 PREDICTED: uncharacterized protein LOC10 0.990 0.945 0.623 0.0
357518863573 hypothetical protein MTR_8g085780 [Medic 0.989 0.944 0.639 0.0
388509150573 unknown [Medicago truncatula] 0.989 0.944 0.635 0.0
356525255575 PREDICTED: uncharacterized protein LOC10 0.987 0.939 0.619 0.0
>gi|225435743|ref|XP_002285710.1| PREDICTED: uncharacterized protein LOC100253639 isoform 1 [Vitis vinifera] gi|359478459|ref|XP_003632119.1| PREDICTED: uncharacterized protein LOC100253639 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/554 (66%), Positives = 448/554 (80%), Gaps = 13/554 (2%)

Query: 4   SEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLE 63
           +EPIGQ  I++ISN+CFSVFVF+VLIFTVIAITYQPPDPWLES+ ALTK F++  N T +
Sbjct: 8   TEPIGQNLIKVISNVCFSVFVFAVLIFTVIAITYQPPDPWLESSPALTKLFTQFHNATFQ 67

Query: 64  DGNSILKSGEVFRS---------APSGSSITEQMIDKAEKKLKNLAVLDDSDCDELREVN 114
           + NS+LK+GE             AP+   ITE +I++ E+++ N+++   SDCD    VN
Sbjct: 68  NDNSVLKTGEDLPDFGVAETPAVAPAVMPITEAVIEEKEERVTNMSL--KSDCDLTGPVN 125

Query: 115 CSDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRR 174
           CSDPRVL+A+ERFNL+ FK+++FLEY TPV+GS  NECDV+WRFR+K++KSWRKY+DFRR
Sbjct: 126 CSDPRVLIAIERFNLRFFKAIVFLEYQTPVSGSAPNECDVSWRFRNKKEKSWRKYRDFRR 185

Query: 175 FRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNT-IVSKAILDDEINDTILS 233
           FR   GE+C YRV  A+GWHSG+NA+R  R RVN TRS G    ++  + D+EINDTI  
Sbjct: 186 FRIGVGENCTYRVTGANGWHSGVNARRQ-RSRVNATRSGGGIGRIAPPVRDEEINDTIPV 244

Query: 234 TGSEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNP 293
            GSE  F++GKYLYY RGGDYCKGMNHF WSFLCGLGEA YL RTFVMDLS+CLAA YNP
Sbjct: 245 LGSEMTFRKGKYLYYSRGGDYCKGMNHFLWSFLCGLGEAQYLNRTFVMDLSICLAATYNP 304

Query: 294 SNQDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKN 353
           SN+D +GKDFRYYFDFEHLK+VAS+VEEGEFLR+WKKWD   ++KV V+KV +YKV P  
Sbjct: 305 SNKDEEGKDFRYYFDFEHLKEVASIVEEGEFLRDWKKWDHSRKRKVPVRKVATYKVTPMQ 364

Query: 354 LKKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDY 413
           L KD STII+RQFDAP P N+W+ VC+ +AAKYI+RPWHAL KSK L+NIV EI GRMD+
Sbjct: 365 LSKDRSTIIYRQFDAPEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTEISGRMDW 424

Query: 414 EYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTL 473
           ++DA+HVVRGE+ +NK+LWP+LDSDTSP ALL KL+E+VHPW NLYIATNEP YNYFD L
Sbjct: 425 DFDAVHVVRGEKAQNKELWPHLDSDTSPDALLAKLKEMVHPWRNLYIATNEPFYNYFDKL 484

Query: 474 RSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETF 533
           RS+YKVHLLDDY++LW +TS+WY+    L RGRPVEFDGYM+  VDTEV YR K R+ETF
Sbjct: 485 RSQYKVHLLDDYKELWGNTSDWYNETRLLNRGRPVEFDGYMKVAVDTEVLYRAKTRVETF 544

Query: 534 NNLTKDCKDGVGYC 547
            NLTKDCKDG+  C
Sbjct: 545 YNLTKDCKDGINTC 558




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838656|emb|CAN65049.1| hypothetical protein VITISV_022864 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449452686|ref|XP_004144090.1| PREDICTED: uncharacterized protein LOC101222244 [Cucumis sativus] gi|449493542|ref|XP_004159340.1| PREDICTED: uncharacterized LOC101222244 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297746466|emb|CBI16522.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255572288|ref|XP_002527083.1| conserved hypothetical protein [Ricinus communis] gi|223533588|gb|EEF35327.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297813343|ref|XP_002874555.1| hypothetical protein ARALYDRAFT_489778 [Arabidopsis lyrata subsp. lyrata] gi|297320392|gb|EFH50814.1| hypothetical protein ARALYDRAFT_489778 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356510951|ref|XP_003524196.1| PREDICTED: uncharacterized protein LOC100802779 [Glycine max] Back     alignment and taxonomy information
>gi|357518863|ref|XP_003629720.1| hypothetical protein MTR_8g085780 [Medicago truncatula] gi|355523742|gb|AET04196.1| hypothetical protein MTR_8g085780 [Medicago truncatula] Back     alignment and taxonomy information
>gi|388509150|gb|AFK42641.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356525255|ref|XP_003531242.1| PREDICTED: uncharacterized protein LOC100801063 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
TAIR|locus:2138228552 SUB1 "AT4G08810" [Arabidopsis 0.981 0.972 0.628 2.6e-196
TAIR|locus:2059767568 AT2G04280 "AT2G04280" [Arabido 0.992 0.955 0.435 9.6e-128
TAIR|locus:2135773561 AT4G12700 "AT4G12700" [Arabido 0.976 0.951 0.430 5.5e-125
TAIR|locus:2063192404 AT2G41150 [Arabidopsis thalian 0.206 0.279 0.28 3.2e-11
TAIR|locus:2103640403 AT3G56750 "AT3G56750" [Arabido 0.206 0.280 0.288 4.1e-11
TAIR|locus:2138228 SUB1 "AT4G08810" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1901 (674.2 bits), Expect = 2.6e-196, P = 2.6e-196
 Identities = 347/552 (62%), Positives = 424/552 (76%)

Query:     4 SEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLE 63
             +EPI Q  I+LISN+CFSVFVF+VLIFTVIA+TYQPPDPWLES  ALTK  ++TEN T +
Sbjct:     8 TEPIAQNLIKLISNVCFSVFVFTVLIFTVIAVTYQPPDPWLESAPALTKLLTETENATFK 67

Query:    64 DGNSILKSGEVFRSAPSGS-------SITEQMIDKAEKKLKNLAVLDDSDCDE-LREVNC 115
                SILK+GE   S+PS S        +TE  I+K+E K+ N+ V +  DCDE L+ VNC
Sbjct:    68 IDGSILKTGEDLASSPSSSPPSNSTEQVTEATIEKSEAKIGNMTVKNSIDCDEDLKIVNC 127

Query:   116 SDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRRF 175
             SDPRVL+AVERFNLK FKS++FLEY TPVNGSK +ECDV+WRFR+K++KSWR+Y+DFRRF
Sbjct:   128 SDPRVLVAVERFNLKVFKSIVFLEYETPVNGSKLDECDVSWRFRNKKEKSWRRYRDFRRF 187

Query:   176 RFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEINDTILSTG 235
             RF +GE+C Y+V H SGWHSG+NA+R    R + +R A          D EINDTI + G
Sbjct:   188 RFGFGENCTYKVFHTSGWHSGVNARRPRISRPSSSRGARGG-------DSEINDTIPTLG 240

Query:   236 SEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSN 295
             S+  F+ GKYLYY RGGDYCKGMN + WSFLCGLGEAMYL RTFVMDLS+CL++ Y+   
Sbjct:   241 SQTSFRRGKYLYYSRGGDYCKGMNQYMWSFLCGLGEAMYLNRTFVMDLSLCLSSSYSSKG 300

Query:   296 QDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEXXXXXXXXXXXXXXXXNLK 355
             +D +GKDFRYYFDFEHLK+ AS+VEEGEFLR+WKKW++ H+                 L 
Sbjct:   301 KDEEGKDFRYYFDFEHLKETASIVEEGEFLRDWKKWNRLHKRKVPVRKVKTHRVSPLQLS 360

Query:   356 KDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEY 415
             KD STIIWRQFD P P N+W+ VC+ +A+KY+ERPWHAL KSK L+NIV+EI G+MD+++
Sbjct:   361 KDKSTIIWRQFDTPEPENYWYRVCEGQASKYVERPWHALWKSKRLMNIVSEISGKMDWDF 420

Query:   416 DAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRS 475
             DA+HVVRGE+ KNKKLWP+LD+DT P A+L KL+ +V  W NLY+ATNEP YNYFD LRS
Sbjct:   421 DAVHVVRGEKAKNKKLWPHLDADTWPDAILTKLKGLVQVWRNLYVATNEPFYNYFDKLRS 480

Query:   476 EYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNN 535
             +YKVHLLDDY  LW + SEWY+  + L  G+PVEFDGYMR  VDTEVFYRGK R+ETF N
Sbjct:   481 QYKVHLLDDYSYLWGNKSEWYNETSLLNNGKPVEFDGYMRVAVDTEVFYRGKTRVETFYN 540

Query:   536 LTKDCKDGVGYC 547
             LT DCKDG+  C
Sbjct:   541 LTTDCKDGINTC 552




GO:0008150 "biological_process" evidence=ND
GO:0005509 "calcium ion binding" evidence=IDA
GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane network" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2059767 AT2G04280 "AT2G04280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135773 AT4G12700 "AT4G12700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063192 AT2G41150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103640 AT3G56750 "AT3G56750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 547
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 99.64
PF01531298 Glyco_transf_11: Glycosyl transferase family 11; I 85.85
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=99.64  E-value=7.2e-17  Score=156.98  Aligned_cols=244  Identities=23%  Similarity=0.293  Sum_probs=123.5

Q ss_pred             CCcchhHHHHHhhcccccccceeeeeecccccccccCCCCCCCCCccceeecchhcccccc-ceeechhhhhhhhHHhHh
Q 048777          256 KGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDVA-SVVEEGEFLREWKKWDQK  334 (547)
Q Consensus       256 kgm~H~~~SllCAL~EA~yLNRTfVMdl~mCLs~~yn~~g~~eegkd~r~yfD~ehl~~~v-~VIe~~qF~~dw~~W~~~  334 (547)
                      .|.|.|.-+|+-|+-=|+.||||||||- .+.....+... ....-.|..+||++||++.+ +||+-.+|+.  +.|...
T Consensus         8 GGfnNQr~~~~~a~~~A~~LnRTLVLPp-~~~~~~~~~~~-~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~--~~~~~~   83 (351)
T PF10250_consen    8 GGFNNQRMGFENAVVFAKALNRTLVLPP-FIKHYHWKDQS-KQRHIPFSDFFDVEHLRKFLRPVITMEEFLP--KHWDEV   83 (351)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHT-EEE--E-EEEESSSS-----EEEEEHHHHB-HHHHTTTS--EE-HHHHHH--HHS-GG
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCEEEcCC-ccccccccccc-cccccChhhhccHHHHHHHhhCceehheecc--chhccc
Confidence            4899999999999999999999999987 33332222111 12234578899999999999 9999998983  223332


Q ss_pred             hc---------------------------ccccceEEEEe-eecccc-ccc------------cccceEEeccCCCCCCC
Q 048777          335 HE---------------------------KKVSVKKVVSY-KVKPKN-LKK------------DNSTIIWRQFDAPSPGN  373 (547)
Q Consensus       335 ~~---------------------------~kL~~r~v~~~-~Vtp~~-Lk~------------~~~~li~rkf~~~ep~n  373 (547)
                      ..                           ++......... ...+.- +.+            ....+.+..+...=+.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  163 (351)
T PF10250_consen   84 FRLQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDN  163 (351)
T ss_dssp             G-EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--
T ss_pred             cchhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhc
Confidence            00                           01111111110 111111 111            01233333333332222


Q ss_pred             eeeeeecccccccccccchhhhhhHHHHHHHHHHhcccC---CCCceEEEecC-cc------------------------
Q 048777          374 FWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMD---YEYDAIHVVRG-ER------------------------  425 (547)
Q Consensus       374 yWy~vCege~~s~i~~P~~~l~kskrLm~iv~~I~~rm~---~DfDavHVrRG-Dk------------------------  425 (547)
                      ++        ...+++   .|..++.|+++|+++..++-   +.|-|||+|+| |+                        
T Consensus       164 ~~--------~~~~~r---~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~~~~C~~~~~~~~~~~~~~~~~~~~  232 (351)
T PF10250_consen  164 YL--------DRDLQR---YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDWFSACEFKGERHLLASPRCWGKKSI  232 (351)
T ss_dssp             GG--------GGGGGG---G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHHHHHHCT-T----TTTHHHH-GGGT
T ss_pred             cc--------CccceE---EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCchHhhcccCCchHHHHHhHhhccccc
Confidence            11        122333   77888999999999998877   99999999999 88                        


Q ss_pred             ---cc-ccccCCCCCCCCChHHHHHHhhhhcC--CCcEEEEeeCCCC--CcchhhhhcceeEeeccchhHHhccCChhhh
Q 048777          426 ---VK-NKKLWPNLDSDTSPGALLEKLEEVVH--PWTNLYIATNEPS--YNYFDTLRSEYKVHLLDDYRDLWNSTSEWYH  497 (547)
Q Consensus       426 ---~~-nk~l~PnLd~DTspE~i~~~i~~~i~--~GR~LYIATnE~~--~~fFdpLk~kY~vhfLdDFk~Lw~~~sewy~  497 (547)
                         .. .....|      +.+.++..|++.+.  ..++||||||+..  ...+++|++.|.-.+   .++.+.    ...
T Consensus       233 ~~~~~~~~~~~p------~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~---~~~~~~----~~~  299 (351)
T PF10250_consen  233 NPEKKRRNGCCP------STPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVV---TKDDLL----SHE  299 (351)
T ss_dssp             T-----HHHHS--------HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHH---GGGT------EE-
T ss_pred             cchhhhhcCCCC------ChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhE---eccccC----CHH
Confidence               10 111233      23455566666554  4599999999943  356788888877444   111111    011


Q ss_pred             hhhhccCCCccccCChhhhhhhHhhhccCceeEeeccc
Q 048777          498 WMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNN  535 (547)
Q Consensus       498 Et~~Ln~G~PV~fdgYmr~mVDteVf~rGK~~VeTf~~  535 (547)
                      |.        ..+++.+..|||++|.+++..||+|..+
T Consensus       300 ~~--------~~~~~~~~a~vD~~i~~~s~~Figt~~S  329 (351)
T PF10250_consen  300 EL--------EPLNDDQLAMVDQEICSRSDVFIGTCGS  329 (351)
T ss_dssp             -S-------------S--HHHHHHHHHHSSEEEE-TT-
T ss_pred             Hh--------hhccccchhHHHHHHHhcCCEEEecCcc
Confidence            22        2344477899999999999999999876



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 60.3 bits (145), Expect = 1e-09
 Identities = 80/583 (13%), Positives = 158/583 (27%), Gaps = 165/583 (28%)

Query: 1   MRESEPIGQMFIRLISNLC------FSVFVFSVLI----FTVIAITYQPPDPWLESTSAL 50
           +   + +     RL   L          FV  VL     F +  I  +   P     S +
Sbjct: 55  IMSKDAVSGTL-RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP-----SMM 108

Query: 51  TKFFSKTENPTLEDGNSILKSGEVFRSAPSGSSITEQMIDKAEKKLKNLAVLDDSDCDEL 110
           T+ + +  +  L + N +     V R          Q   K  + L            EL
Sbjct: 109 TRMYIEQRDR-LYNDNQVFAKYNVSR---------LQPYLKLRQALL-----------EL 147

Query: 111 REVNCSDPRVLLAVERFNLKQF-KSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKY 169
           R        VL+      +    K+ + L+           +  + W      +      
Sbjct: 148 R----PAKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 170 KDFRRFRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEIND 229
           +  ++  ++   +   R +H+S     I++ +   RR+  ++   N ++   +L + + +
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL---VLLN-VQN 255

Query: 230 ------------TILST--GSEADFKEGKYLYYKRGGDYCKGMNH------FA-WS---- 264
                        +L+T      DF       +     +   +           +     
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 265 ------------FLCGL-GEAM--------YLKRTFVMDLSMCLAAKYNPSNQDVDGKDF 303
                           +  E++          K      L+  + +  N     ++  ++
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN----VLEPAEY 371

Query: 304 RYYFD----FEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKNLKKDNS 359
           R  FD    F         +        W     K +  V V K+  Y +  K  K+   
Sbjct: 372 RKMFDRLSVFP--PSAH--IPTILLSLIWFD-VIKSDVMVVVNKLHKYSLVEKQPKESTI 426

Query: 360 TIIWRQFDAPSPGNFWFMVCDREAA---KYIER-------PWHALLKSKILLNIVAEIGG 409
           +I     +            + E A     ++            L+   +          
Sbjct: 427 SIPSIYLELKVK-------LENEYALHRSIVDHYNIPKTFDSDDLIPPYL---------- 469

Query: 410 RMD---YEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLE-KLEEVVHPW------TNL- 458
             D   Y +   H+   E  +   L+  +  D      LE K+      W       N  
Sbjct: 470 --DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR---FLEQKIRHDSTAWNASGSILNTL 524

Query: 459 --------YIATNEPSY-----NYFDTLRSEYKVHLLDDYRDL 488
                   YI  N+P Y        D L    +  +   Y DL
Sbjct: 525 QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDL 567


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query547
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.63
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 98.47
2de0_X 526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 97.84
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 97.48
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.63  E-value=7.3e-16  Score=154.14  Aligned_cols=274  Identities=16%  Similarity=0.201  Sum_probs=158.1

Q ss_pred             ccceeEEEeCC-CCcCCCcchhHHHHHhhccccccccee----eeeecccccccccCCCCCCCCCccceeecchhccccc
Q 048777          241 KEGKYLYYKRG-GDYCKGMNHFAWSFLCGLGEAMYLKRT----FVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDV  315 (547)
Q Consensus       241 ~~gKYLyy~~g-Gd~Ckgm~H~~~SllCAL~EA~yLNRT----fVMdl~mCLs~~yn~~g~~eegkd~r~yfD~ehl~~~  315 (547)
                      ++-|||.|--- |   .|-|=|-=.|+=++.=|+.||||    ||||--.=+ ..|......+..-.|.-+||+++|++-
T Consensus        20 ~~~rYl~y~~~~g---~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~-~h~~~~~~~~~~ipf~~fFDv~~L~~~   95 (408)
T 4ap5_A           20 SRRRYLLYDVNPP---EGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRL-YHWQSPDIHQVRIPWSEFFDLPSLNKN   95 (408)
T ss_dssp             CCCEEEEECCCTT---CCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCS-CGGGSTTSCCCSBCGGGTBCHHHHHTT
T ss_pred             cccceEEecCCCC---CcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCccc-ccccCCcccceeccHHHhcCHHHHHhh
Confidence            56899999542 2   45666666666667788999999    999933212 222322222223468899999999999


Q ss_pred             cceeechhhhhhhhH--HhHh----h-cccccceEEEEeeeccccccccccceEEec--cCCCCCCCee--------eee
Q 048777          316 ASVVEEGEFLREWKK--WDQK----H-EKKVSVKKVVSYKVKPKNLKKDNSTIIWRQ--FDAPSPGNFW--------FMV  378 (547)
Q Consensus       316 v~VIe~~qF~~dw~~--W~~~----~-~~kL~~r~v~~~~Vtp~~Lk~~~~~li~rk--f~~~ep~nyW--------y~v  378 (547)
                      +|||+-.||+++...  |...    . ..+.......+    +.+.+...+......  -+.+. +-+|        -..
T Consensus        96 vpVI~meeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~----k~~~~~c~~~~~~~~~~~~~~~-gpfw~~~~v~~~~~~  170 (408)
T 4ap5_A           96 IPVIEYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEE----KVDERPCIDQLLYSQDKHEYYR-GWFWGYEETRGLNVS  170 (408)
T ss_dssp             SCEEEHHHHHHHSSSSEEEEEEEEECCTTCCCTTCCCC----CEEEECCSSCCSCEECTTSCEE-CCGGGCTTCEEEEEE
T ss_pred             CCeeEHHHHHHHhCCCCCcceeeccccHhhcccccccc----hhhhhhhhhccccccccccCcc-CCcccccccccCCce
Confidence            999999999987531  2210    0 00000000000    000000000000000  00000 0011        012


Q ss_pred             eccccc--cccc-------------------ccc------------hhhhhhHHHHHHHHHHhcc---------------
Q 048777          379 CDREAA--KYIE-------------------RPW------------HALLKSKILLNIVAEIGGR---------------  410 (547)
Q Consensus       379 Cege~~--s~i~-------------------~P~------------~~l~kskrLm~iv~~I~~r---------------  410 (547)
                      |-.--.  +.+.                   .|.            ..|..++.|++++++....               
T Consensus       171 c~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~r~l~~s~~l~~~a~~fi~~~L~~~~~~~h~r~~~  250 (408)
T 4ap5_A          171 CLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDADRIPFQE  250 (408)
T ss_dssp             EEEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHHHTCCBCHHHHHHHHHHHHHHHCCCTTTTTCCCCS
T ss_pred             eEEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHHHHhhhhHHHHHHHHHHHHHHhCcccceeecccch
Confidence            211000  0000                   011            1123578888888774431               


Q ss_pred             ------------cCCCCceEEEecCccccccc-cCCCCCCCCChHHHHHHhhhhcC--CCcEEEEeeCCCCCcchhhhhc
Q 048777          411 ------------MDYEYDAIHVVRGERVKNKK-LWPNLDSDTSPGALLEKLEEVVH--PWTNLYIATNEPSYNYFDTLRS  475 (547)
Q Consensus       411 ------------m~~DfDavHVrRGDk~~nk~-l~PnLd~DTspE~i~~~i~~~i~--~GR~LYIATnE~~~~fFdpLk~  475 (547)
                                  .++.|.++|+||||+++.++ ..|      |.+.+++.|++.+.  ..+.||||||+.+..+++..+.
T Consensus       251 dw~~~~~~~~~~~~~~y~~~H~Rr~d~~~~~~~~~p------s~~~~~~~i~~~~~~~~~~~VyiATD~~~~~~~~l~~~  324 (408)
T 4ap5_A          251 DWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVP------SLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKL  324 (408)
T ss_dssp             SGGGCCCCTTCBCCEEEEEEEECCTTTTTTTCSSSC------CHHHHHHHHHHHHHHHTCSCEEEEECCCHHHHHHHHHH
T ss_pred             hHhhhhcccccccCCCccccccccccchhhhhccCC------CHHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHh
Confidence                        35689999999999987654 233      45677777777665  6688999999988777765555


Q ss_pred             ceeEeeccchhHHhccCChhhhhhhhccCCCccccCChhhhhhhHhhhccCceeEeeccc--------------ccc---
Q 048777          476 EYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNN--------------LTK---  538 (547)
Q Consensus       476 kY~vhfLdDFk~Lw~~~sewy~Et~~Ln~G~PV~fdgYmr~mVDteVf~rGK~~VeTf~~--------------lt~---  538 (547)
                      ...+.+++++.+..+          .       .-|||+ .|||++|..||+.||+|..+              +++   
T Consensus       325 ~~~~~~~~~~~~~~~----------~-------~~d~~~-a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~~~t  386 (408)
T 4ap5_A          325 LPEMVRFEPTWEELE----------L-------YKDGGV-AIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTT  386 (408)
T ss_dssp             CTTEECCCCCHHHHH----------H-------HHHHHH-HHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCGGGT
T ss_pred             CCCcEEecCcchhhh----------c-------cCcchh-hHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCCCcc
Confidence            566766666665544          1       124454 89999999999999998754              332   


Q ss_pred             ---cccCccCCC
Q 048777          539 ---DCKDGVGYC  547 (547)
Q Consensus       539 ---DCKdGintC  547 (547)
                         =|+|+-..|
T Consensus       387 ~~~~c~~~~~~~  398 (408)
T 4ap5_A          387 YNRFCGDQEKAC  398 (408)
T ss_dssp             SCBCCCTTCSSC
T ss_pred             ccccCCCCccCC
Confidence               388888777



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00