Citrus Sinensis ID: 048777
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 547 | ||||||
| 225435743 | 558 | PREDICTED: uncharacterized protein LOC10 | 0.989 | 0.969 | 0.664 | 0.0 | |
| 147838656 | 558 | hypothetical protein VITISV_022864 [Viti | 0.989 | 0.969 | 0.664 | 0.0 | |
| 449452686 | 557 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.974 | 0.662 | 0.0 | |
| 297746466 | 586 | unnamed protein product [Vitis vinifera] | 0.961 | 0.897 | 0.649 | 0.0 | |
| 255572288 | 565 | conserved hypothetical protein [Ricinus | 0.990 | 0.959 | 0.65 | 0.0 | |
| 297813343 | 557 | hypothetical protein ARALYDRAFT_489778 [ | 0.992 | 0.974 | 0.632 | 0.0 | |
| 356510951 | 573 | PREDICTED: uncharacterized protein LOC10 | 0.990 | 0.945 | 0.623 | 0.0 | |
| 357518863 | 573 | hypothetical protein MTR_8g085780 [Medic | 0.989 | 0.944 | 0.639 | 0.0 | |
| 388509150 | 573 | unknown [Medicago truncatula] | 0.989 | 0.944 | 0.635 | 0.0 | |
| 356525255 | 575 | PREDICTED: uncharacterized protein LOC10 | 0.987 | 0.939 | 0.619 | 0.0 |
| >gi|225435743|ref|XP_002285710.1| PREDICTED: uncharacterized protein LOC100253639 isoform 1 [Vitis vinifera] gi|359478459|ref|XP_003632119.1| PREDICTED: uncharacterized protein LOC100253639 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/554 (66%), Positives = 448/554 (80%), Gaps = 13/554 (2%)
Query: 4 SEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLE 63
+EPIGQ I++ISN+CFSVFVF+VLIFTVIAITYQPPDPWLES+ ALTK F++ N T +
Sbjct: 8 TEPIGQNLIKVISNVCFSVFVFAVLIFTVIAITYQPPDPWLESSPALTKLFTQFHNATFQ 67
Query: 64 DGNSILKSGEVFRS---------APSGSSITEQMIDKAEKKLKNLAVLDDSDCDELREVN 114
+ NS+LK+GE AP+ ITE +I++ E+++ N+++ SDCD VN
Sbjct: 68 NDNSVLKTGEDLPDFGVAETPAVAPAVMPITEAVIEEKEERVTNMSL--KSDCDLTGPVN 125
Query: 115 CSDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRR 174
CSDPRVL+A+ERFNL+ FK+++FLEY TPV+GS NECDV+WRFR+K++KSWRKY+DFRR
Sbjct: 126 CSDPRVLIAIERFNLRFFKAIVFLEYQTPVSGSAPNECDVSWRFRNKKEKSWRKYRDFRR 185
Query: 175 FRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNT-IVSKAILDDEINDTILS 233
FR GE+C YRV A+GWHSG+NA+R R RVN TRS G ++ + D+EINDTI
Sbjct: 186 FRIGVGENCTYRVTGANGWHSGVNARRQ-RSRVNATRSGGGIGRIAPPVRDEEINDTIPV 244
Query: 234 TGSEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNP 293
GSE F++GKYLYY RGGDYCKGMNHF WSFLCGLGEA YL RTFVMDLS+CLAA YNP
Sbjct: 245 LGSEMTFRKGKYLYYSRGGDYCKGMNHFLWSFLCGLGEAQYLNRTFVMDLSICLAATYNP 304
Query: 294 SNQDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKN 353
SN+D +GKDFRYYFDFEHLK+VAS+VEEGEFLR+WKKWD ++KV V+KV +YKV P
Sbjct: 305 SNKDEEGKDFRYYFDFEHLKEVASIVEEGEFLRDWKKWDHSRKRKVPVRKVATYKVTPMQ 364
Query: 354 LKKDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDY 413
L KD STII+RQFDAP P N+W+ VC+ +AAKYI+RPWHAL KSK L+NIV EI GRMD+
Sbjct: 365 LSKDRSTIIYRQFDAPEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTEISGRMDW 424
Query: 414 EYDAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTL 473
++DA+HVVRGE+ +NK+LWP+LDSDTSP ALL KL+E+VHPW NLYIATNEP YNYFD L
Sbjct: 425 DFDAVHVVRGEKAQNKELWPHLDSDTSPDALLAKLKEMVHPWRNLYIATNEPFYNYFDKL 484
Query: 474 RSEYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETF 533
RS+YKVHLLDDY++LW +TS+WY+ L RGRPVEFDGYM+ VDTEV YR K R+ETF
Sbjct: 485 RSQYKVHLLDDYKELWGNTSDWYNETRLLNRGRPVEFDGYMKVAVDTEVLYRAKTRVETF 544
Query: 534 NNLTKDCKDGVGYC 547
NLTKDCKDG+ C
Sbjct: 545 YNLTKDCKDGINTC 558
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147838656|emb|CAN65049.1| hypothetical protein VITISV_022864 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449452686|ref|XP_004144090.1| PREDICTED: uncharacterized protein LOC101222244 [Cucumis sativus] gi|449493542|ref|XP_004159340.1| PREDICTED: uncharacterized LOC101222244 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297746466|emb|CBI16522.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255572288|ref|XP_002527083.1| conserved hypothetical protein [Ricinus communis] gi|223533588|gb|EEF35327.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297813343|ref|XP_002874555.1| hypothetical protein ARALYDRAFT_489778 [Arabidopsis lyrata subsp. lyrata] gi|297320392|gb|EFH50814.1| hypothetical protein ARALYDRAFT_489778 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356510951|ref|XP_003524196.1| PREDICTED: uncharacterized protein LOC100802779 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357518863|ref|XP_003629720.1| hypothetical protein MTR_8g085780 [Medicago truncatula] gi|355523742|gb|AET04196.1| hypothetical protein MTR_8g085780 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|388509150|gb|AFK42641.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356525255|ref|XP_003531242.1| PREDICTED: uncharacterized protein LOC100801063 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 547 | ||||||
| TAIR|locus:2138228 | 552 | SUB1 "AT4G08810" [Arabidopsis | 0.981 | 0.972 | 0.628 | 2.6e-196 | |
| TAIR|locus:2059767 | 568 | AT2G04280 "AT2G04280" [Arabido | 0.992 | 0.955 | 0.435 | 9.6e-128 | |
| TAIR|locus:2135773 | 561 | AT4G12700 "AT4G12700" [Arabido | 0.976 | 0.951 | 0.430 | 5.5e-125 | |
| TAIR|locus:2063192 | 404 | AT2G41150 [Arabidopsis thalian | 0.206 | 0.279 | 0.28 | 3.2e-11 | |
| TAIR|locus:2103640 | 403 | AT3G56750 "AT3G56750" [Arabido | 0.206 | 0.280 | 0.288 | 4.1e-11 |
| TAIR|locus:2138228 SUB1 "AT4G08810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1901 (674.2 bits), Expect = 2.6e-196, P = 2.6e-196
Identities = 347/552 (62%), Positives = 424/552 (76%)
Query: 4 SEPIGQMFIRLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESTSALTKFFSKTENPTLE 63
+EPI Q I+LISN+CFSVFVF+VLIFTVIA+TYQPPDPWLES ALTK ++TEN T +
Sbjct: 8 TEPIAQNLIKLISNVCFSVFVFTVLIFTVIAVTYQPPDPWLESAPALTKLLTETENATFK 67
Query: 64 DGNSILKSGEVFRSAPSGS-------SITEQMIDKAEKKLKNLAVLDDSDCDE-LREVNC 115
SILK+GE S+PS S +TE I+K+E K+ N+ V + DCDE L+ VNC
Sbjct: 68 IDGSILKTGEDLASSPSSSPPSNSTEQVTEATIEKSEAKIGNMTVKNSIDCDEDLKIVNC 127
Query: 116 SDPRVLLAVERFNLKQFKSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKYKDFRRF 175
SDPRVL+AVERFNLK FKS++FLEY TPVNGSK +ECDV+WRFR+K++KSWR+Y+DFRRF
Sbjct: 128 SDPRVLVAVERFNLKVFKSIVFLEYETPVNGSKLDECDVSWRFRNKKEKSWRRYRDFRRF 187
Query: 176 RFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEINDTILSTG 235
RF +GE+C Y+V H SGWHSG+NA+R R + +R A D EINDTI + G
Sbjct: 188 RFGFGENCTYKVFHTSGWHSGVNARRPRISRPSSSRGARGG-------DSEINDTIPTLG 240
Query: 236 SEADFKEGKYLYYKRGGDYCKGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSN 295
S+ F+ GKYLYY RGGDYCKGMN + WSFLCGLGEAMYL RTFVMDLS+CL++ Y+
Sbjct: 241 SQTSFRRGKYLYYSRGGDYCKGMNQYMWSFLCGLGEAMYLNRTFVMDLSLCLSSSYSSKG 300
Query: 296 QDVDGKDFRYYFDFEHLKDVASVVEEGEFLREWKKWDQKHEXXXXXXXXXXXXXXXXNLK 355
+D +GKDFRYYFDFEHLK+ AS+VEEGEFLR+WKKW++ H+ L
Sbjct: 301 KDEEGKDFRYYFDFEHLKETASIVEEGEFLRDWKKWNRLHKRKVPVRKVKTHRVSPLQLS 360
Query: 356 KDNSTIIWRQFDAPSPGNFWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMDYEY 415
KD STIIWRQFD P P N+W+ VC+ +A+KY+ERPWHAL KSK L+NIV+EI G+MD+++
Sbjct: 361 KDKSTIIWRQFDTPEPENYWYRVCEGQASKYVERPWHALWKSKRLMNIVSEISGKMDWDF 420
Query: 416 DAIHVVRGERVKNKKLWPNLDSDTSPGALLEKLEEVVHPWTNLYIATNEPSYNYFDTLRS 475
DA+HVVRGE+ KNKKLWP+LD+DT P A+L KL+ +V W NLY+ATNEP YNYFD LRS
Sbjct: 421 DAVHVVRGEKAKNKKLWPHLDADTWPDAILTKLKGLVQVWRNLYVATNEPFYNYFDKLRS 480
Query: 476 EYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNN 535
+YKVHLLDDY LW + SEWY+ + L G+PVEFDGYMR VDTEVFYRGK R+ETF N
Sbjct: 481 QYKVHLLDDYSYLWGNKSEWYNETSLLNNGKPVEFDGYMRVAVDTEVFYRGKTRVETFYN 540
Query: 536 LTKDCKDGVGYC 547
LT DCKDG+ C
Sbjct: 541 LTTDCKDGINTC 552
|
|
| TAIR|locus:2059767 AT2G04280 "AT2G04280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2135773 AT4G12700 "AT4G12700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2063192 AT2G41150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2103640 AT3G56750 "AT3G56750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 547 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 99.64 | |
| PF01531 | 298 | Glyco_transf_11: Glycosyl transferase family 11; I | 85.85 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.2e-17 Score=156.98 Aligned_cols=244 Identities=23% Similarity=0.293 Sum_probs=123.5
Q ss_pred CCcchhHHHHHhhcccccccceeeeeecccccccccCCCCCCCCCccceeecchhcccccc-ceeechhhhhhhhHHhHh
Q 048777 256 KGMNHFAWSFLCGLGEAMYLKRTFVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDVA-SVVEEGEFLREWKKWDQK 334 (547)
Q Consensus 256 kgm~H~~~SllCAL~EA~yLNRTfVMdl~mCLs~~yn~~g~~eegkd~r~yfD~ehl~~~v-~VIe~~qF~~dw~~W~~~ 334 (547)
.|.|.|.-+|+-|+-=|+.||||||||- .+.....+... ....-.|..+||++||++.+ +||+-.+|+. +.|...
T Consensus 8 GGfnNQr~~~~~a~~~A~~LnRTLVLPp-~~~~~~~~~~~-~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~--~~~~~~ 83 (351)
T PF10250_consen 8 GGFNNQRMGFENAVVFAKALNRTLVLPP-FIKHYHWKDQS-KQRHIPFSDFFDVEHLRKFLRPVITMEEFLP--KHWDEV 83 (351)
T ss_dssp SSHHHHHHHHHHHHHHHHHHT-EEE--E-EEEESSSS-----EEEEEHHHHB-HHHHTTTS--EE-HHHHHH--HHS-GG
T ss_pred CCHHHHHHHHHHHHHHHHHhCCEEEcCC-ccccccccccc-cccccChhhhccHHHHHHHhhCceehheecc--chhccc
Confidence 4899999999999999999999999987 33332222111 12234578899999999999 9999998983 223332
Q ss_pred hc---------------------------ccccceEEEEe-eecccc-ccc------------cccceEEeccCCCCCCC
Q 048777 335 HE---------------------------KKVSVKKVVSY-KVKPKN-LKK------------DNSTIIWRQFDAPSPGN 373 (547)
Q Consensus 335 ~~---------------------------~kL~~r~v~~~-~Vtp~~-Lk~------------~~~~li~rkf~~~ep~n 373 (547)
.. ++......... ...+.- +.+ ....+.+..+...=+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 163 (351)
T PF10250_consen 84 FRLQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDN 163 (351)
T ss_dssp G-EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--
T ss_pred cchhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhc
Confidence 00 01111111110 111111 111 01233333333332222
Q ss_pred eeeeeecccccccccccchhhhhhHHHHHHHHHHhcccC---CCCceEEEecC-cc------------------------
Q 048777 374 FWFMVCDREAAKYIERPWHALLKSKILLNIVAEIGGRMD---YEYDAIHVVRG-ER------------------------ 425 (547)
Q Consensus 374 yWy~vCege~~s~i~~P~~~l~kskrLm~iv~~I~~rm~---~DfDavHVrRG-Dk------------------------ 425 (547)
++ ...+++ .|..++.|+++|+++..++- +.|-|||+|+| |+
T Consensus 164 ~~--------~~~~~r---~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~~~~C~~~~~~~~~~~~~~~~~~~~ 232 (351)
T PF10250_consen 164 YL--------DRDLQR---YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDWFSACEFKGERHLLASPRCWGKKSI 232 (351)
T ss_dssp GG--------GGGGGG---G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHHHHHHCT-T----TTTHHHH-GGGT
T ss_pred cc--------CccceE---EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCchHhhcccCCchHHHHHhHhhccccc
Confidence 11 122333 77888999999999998877 99999999999 88
Q ss_pred ---cc-ccccCCCCCCCCChHHHHHHhhhhcC--CCcEEEEeeCCCC--CcchhhhhcceeEeeccchhHHhccCChhhh
Q 048777 426 ---VK-NKKLWPNLDSDTSPGALLEKLEEVVH--PWTNLYIATNEPS--YNYFDTLRSEYKVHLLDDYRDLWNSTSEWYH 497 (547)
Q Consensus 426 ---~~-nk~l~PnLd~DTspE~i~~~i~~~i~--~GR~LYIATnE~~--~~fFdpLk~kY~vhfLdDFk~Lw~~~sewy~ 497 (547)
.. .....| +.+.++..|++.+. ..++||||||+.. ...+++|++.|.-.+ .++.+. ...
T Consensus 233 ~~~~~~~~~~~p------~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~---~~~~~~----~~~ 299 (351)
T PF10250_consen 233 NPEKKRRNGCCP------STPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVV---TKDDLL----SHE 299 (351)
T ss_dssp T-----HHHHS--------HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHH---GGGT------EE-
T ss_pred cchhhhhcCCCC------ChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhE---eccccC----CHH
Confidence 10 111233 23455566666554 4599999999943 356788888877444 111111 011
Q ss_pred hhhhccCCCccccCChhhhhhhHhhhccCceeEeeccc
Q 048777 498 WMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNN 535 (547)
Q Consensus 498 Et~~Ln~G~PV~fdgYmr~mVDteVf~rGK~~VeTf~~ 535 (547)
|. ..+++.+..|||++|.+++..||+|..+
T Consensus 300 ~~--------~~~~~~~~a~vD~~i~~~s~~Figt~~S 329 (351)
T PF10250_consen 300 EL--------EPLNDDQLAMVDQEICSRSDVFIGTCGS 329 (351)
T ss_dssp -S-------------S--HHHHHHHHHHSSEEEE-TT-
T ss_pred Hh--------hhccccchhHHHHHHHhcCCEEEecCcc
Confidence 22 2344477899999999999999999876
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 547 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.3 bits (145), Expect = 1e-09
Identities = 80/583 (13%), Positives = 158/583 (27%), Gaps = 165/583 (28%)
Query: 1 MRESEPIGQMFIRLISNLC------FSVFVFSVLI----FTVIAITYQPPDPWLESTSAL 50
+ + + RL L FV VL F + I + P S +
Sbjct: 55 IMSKDAVSGTL-RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP-----SMM 108
Query: 51 TKFFSKTENPTLEDGNSILKSGEVFRSAPSGSSITEQMIDKAEKKLKNLAVLDDSDCDEL 110
T+ + + + L + N + V R Q K + L EL
Sbjct: 109 TRMYIEQRDR-LYNDNQVFAKYNVSR---------LQPYLKLRQALL-----------EL 147
Query: 111 REVNCSDPRVLLAVERFNLKQF-KSVLFLEYLTPVNGSKANECDVAWRFRSKRDKSWRKY 169
R VL+ + K+ + L+ + + W +
Sbjct: 148 R----PAKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 170 KDFRRFRFEYGEDCFYRVEHASGWHSGINAKRLFRRRVNGTRSAGNTIVSKAILDDEIND 229
+ ++ ++ + R +H+S I++ + RR+ ++ N ++ +L + + +
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL---VLLN-VQN 255
Query: 230 ------------TILST--GSEADFKEGKYLYYKRGGDYCKGMNH------FA-WS---- 264
+L+T DF + + + +
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 265 ------------FLCGL-GEAM--------YLKRTFVMDLSMCLAAKYNPSNQDVDGKDF 303
+ E++ K L+ + + N ++ ++
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN----VLEPAEY 371
Query: 304 RYYFD----FEHLKDVASVVEEGEFLREWKKWDQKHEKKVSVKKVVSYKVKPKNLKKDNS 359
R FD F + W K + V V K+ Y + K K+
Sbjct: 372 RKMFDRLSVFP--PSAH--IPTILLSLIWFD-VIKSDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 360 TIIWRQFDAPSPGNFWFMVCDREAA---KYIER-------PWHALLKSKILLNIVAEIGG 409
+I + + E A ++ L+ +
Sbjct: 427 SIPSIYLELKVK-------LENEYALHRSIVDHYNIPKTFDSDDLIPPYL---------- 469
Query: 410 RMD---YEYDAIHVVRGERVKNKKLWPNLDSDTSPGALLE-KLEEVVHPW------TNL- 458
D Y + H+ E + L+ + D LE K+ W N
Sbjct: 470 --DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR---FLEQKIRHDSTAWNASGSILNTL 524
Query: 459 --------YIATNEPSY-----NYFDTLRSEYKVHLLDDYRDL 488
YI N+P Y D L + + Y DL
Sbjct: 525 QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDL 567
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 547 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.63 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 98.47 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 97.84 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 97.48 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=7.3e-16 Score=154.14 Aligned_cols=274 Identities=16% Similarity=0.201 Sum_probs=158.1
Q ss_pred ccceeEEEeCC-CCcCCCcchhHHHHHhhccccccccee----eeeecccccccccCCCCCCCCCccceeecchhccccc
Q 048777 241 KEGKYLYYKRG-GDYCKGMNHFAWSFLCGLGEAMYLKRT----FVMDLSMCLAAKYNPSNQDVDGKDFRYYFDFEHLKDV 315 (547)
Q Consensus 241 ~~gKYLyy~~g-Gd~Ckgm~H~~~SllCAL~EA~yLNRT----fVMdl~mCLs~~yn~~g~~eegkd~r~yfD~ehl~~~ 315 (547)
++-|||.|--- | .|-|=|-=.|+=++.=|+.|||| ||||--.=+ ..|......+..-.|.-+||+++|++-
T Consensus 20 ~~~rYl~y~~~~g---~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~-~h~~~~~~~~~~ipf~~fFDv~~L~~~ 95 (408)
T 4ap5_A 20 SRRRYLLYDVNPP---EGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRL-YHWQSPDIHQVRIPWSEFFDLPSLNKN 95 (408)
T ss_dssp CCCEEEEECCCTT---CCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCS-CGGGSTTSCCCSBCGGGTBCHHHHHTT
T ss_pred cccceEEecCCCC---CcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCccc-ccccCCcccceeccHHHhcCHHHHHhh
Confidence 56899999542 2 45666666666667788999999 999933212 222322222223468899999999999
Q ss_pred cceeechhhhhhhhH--HhHh----h-cccccceEEEEeeeccccccccccceEEec--cCCCCCCCee--------eee
Q 048777 316 ASVVEEGEFLREWKK--WDQK----H-EKKVSVKKVVSYKVKPKNLKKDNSTIIWRQ--FDAPSPGNFW--------FMV 378 (547)
Q Consensus 316 v~VIe~~qF~~dw~~--W~~~----~-~~kL~~r~v~~~~Vtp~~Lk~~~~~li~rk--f~~~ep~nyW--------y~v 378 (547)
+|||+-.||+++... |... . ..+.......+ +.+.+...+...... -+.+. +-+| -..
T Consensus 96 vpVI~meeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~----k~~~~~c~~~~~~~~~~~~~~~-gpfw~~~~v~~~~~~ 170 (408)
T 4ap5_A 96 IPVIEYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEE----KVDERPCIDQLLYSQDKHEYYR-GWFWGYEETRGLNVS 170 (408)
T ss_dssp SCEEEHHHHHHHSSSSEEEEEEEEECCTTCCCTTCCCC----CEEEECCSSCCSCEECTTSCEE-CCGGGCTTCEEEEEE
T ss_pred CCeeEHHHHHHHhCCCCCcceeeccccHhhcccccccc----hhhhhhhhhccccccccccCcc-CCcccccccccCCce
Confidence 999999999987531 2210 0 00000000000 000000000000000 00000 0011 012
Q ss_pred eccccc--cccc-------------------ccc------------hhhhhhHHHHHHHHHHhcc---------------
Q 048777 379 CDREAA--KYIE-------------------RPW------------HALLKSKILLNIVAEIGGR--------------- 410 (547)
Q Consensus 379 Cege~~--s~i~-------------------~P~------------~~l~kskrLm~iv~~I~~r--------------- 410 (547)
|-.--. +.+. .|. ..|..++.|++++++....
T Consensus 171 c~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~r~l~~s~~l~~~a~~fi~~~L~~~~~~~h~r~~~ 250 (408)
T 4ap5_A 171 CLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDADRIPFQE 250 (408)
T ss_dssp EEEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHHHTCCBCHHHHHHHHHHHHHHHCCCTTTTTCCCCS
T ss_pred eEEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHHHHhhhhHHHHHHHHHHHHHHhCcccceeecccch
Confidence 211000 0000 011 1123578888888774431
Q ss_pred ------------cCCCCceEEEecCccccccc-cCCCCCCCCChHHHHHHhhhhcC--CCcEEEEeeCCCCCcchhhhhc
Q 048777 411 ------------MDYEYDAIHVVRGERVKNKK-LWPNLDSDTSPGALLEKLEEVVH--PWTNLYIATNEPSYNYFDTLRS 475 (547)
Q Consensus 411 ------------m~~DfDavHVrRGDk~~nk~-l~PnLd~DTspE~i~~~i~~~i~--~GR~LYIATnE~~~~fFdpLk~ 475 (547)
.++.|.++|+||||+++.++ ..| |.+.+++.|++.+. ..+.||||||+.+..+++..+.
T Consensus 251 dw~~~~~~~~~~~~~~y~~~H~Rr~d~~~~~~~~~p------s~~~~~~~i~~~~~~~~~~~VyiATD~~~~~~~~l~~~ 324 (408)
T 4ap5_A 251 DWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVP------SLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKL 324 (408)
T ss_dssp SGGGCCCCTTCBCCEEEEEEEECCTTTTTTTCSSSC------CHHHHHHHHHHHHHHHTCSCEEEEECCCHHHHHHHHHH
T ss_pred hHhhhhcccccccCCCccccccccccchhhhhccCC------CHHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHh
Confidence 35689999999999987654 233 45677777777665 6688999999988777765555
Q ss_pred ceeEeeccchhHHhccCChhhhhhhhccCCCccccCChhhhhhhHhhhccCceeEeeccc--------------ccc---
Q 048777 476 EYKVHLLDDYRDLWNSTSEWYHWMTRLTRGRPVEFDGYMRAIVDTEVFYRGKIRLETFNN--------------LTK--- 538 (547)
Q Consensus 476 kY~vhfLdDFk~Lw~~~sewy~Et~~Ln~G~PV~fdgYmr~mVDteVf~rGK~~VeTf~~--------------lt~--- 538 (547)
...+.+++++.+..+ . .-|||+ .|||++|..||+.||+|..+ +++
T Consensus 325 ~~~~~~~~~~~~~~~----------~-------~~d~~~-a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~~~t 386 (408)
T 4ap5_A 325 LPEMVRFEPTWEELE----------L-------YKDGGV-AIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTT 386 (408)
T ss_dssp CTTEECCCCCHHHHH----------H-------HHHHHH-HHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCGGGT
T ss_pred CCCcEEecCcchhhh----------c-------cCcchh-hHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCCCcc
Confidence 566766666665544 1 124454 89999999999999998754 332
Q ss_pred ---cccCccCCC
Q 048777 539 ---DCKDGVGYC 547 (547)
Q Consensus 539 ---DCKdGintC 547 (547)
=|+|+-..|
T Consensus 387 ~~~~c~~~~~~~ 398 (408)
T 4ap5_A 387 YNRFCGDQEKAC 398 (408)
T ss_dssp SCBCCCTTCSSC
T ss_pred ccccCCCCccCC
Confidence 388888777
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00