List of proteins associated with COG cluster: COG1039   RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
Protein ID
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analysis report

Similarity with COG COG1039
All predicted COG clusters
1g029591m 191 hhsearch probability: 91.38    Identity: 24%
subject length: 297   Length of aligned reigon: 41
Coverage over query: 138-178   Coverage over subject: 28-68
COG2101, SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
COG4871, Uncharacterized protein conserved in archaea [Function unknown]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
1g047239m 180 hhsearch probability: 94.41    Identity: 30%
subject length: 297   Length of aligned reigon: 43
Coverage over query: 36-78   Coverage over subject: 28-70
COG2101, SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
COG4871, Uncharacterized protein conserved in archaea [Function unknown]
1g031013m 167 hhsearch probability: 94.90    Identity: 25%
subject length: 297   Length of aligned reigon: 44
Coverage over query: 113-156   Coverage over subject: 27-70
COG2101, SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
COG4871, Uncharacterized protein conserved in archaea [Function unknown]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
1g022427m 297 hhsearch probability: 100.00    Identity: 22%
subject length: 297   Length of aligned reigon: 206
Coverage over query: 14-231   Coverage over subject: 83-294
COG0164, RnhB Ribonuclease HII [DNA replication, recombination, and repair]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
1g030402m 178 hhsearch probability: 100.00    Identity: 24%
subject length: 297   Length of aligned reigon: 160
Coverage over query: 14-177   Coverage over subject: 83-245
COG0164, RnhB Ribonuclease HII [DNA replication, recombination, and repair]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
1g026552m 237 hhsearch probability: 99.57    Identity: 19%
subject length: 297   Length of aligned reigon: 154
Coverage over query: 4-170   Coverage over subject: 132-293
COG0164, RnhB Ribonuclease HII [DNA replication, recombination, and repair]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
1g023038m 288 hhsearch probability: 100.00    Identity: 25%
subject length: 297   Length of aligned reigon: 179
Coverage over query: 14-199   Coverage over subject: 83-264
COG0164, RnhB Ribonuclease HII [DNA replication, recombination, and repair]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
1g027718m 219 hhsearch probability: 100.00    Identity: 23%
subject length: 297   Length of aligned reigon: 185
Coverage over query: 14-205   Coverage over subject: 83-270
COG0164, RnhB Ribonuclease HII [DNA replication, recombination, and repair]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]
1g029710m 189 hhsearch probability: 98.74    Identity: 20%
subject length: 297   Length of aligned reigon: 101
Coverage over query: 1-109   Coverage over subject: 171-277
COG0164, RnhB Ribonuclease HII [DNA replication, recombination, and repair]
COG1039, RnhC Ribonuclease HIII [DNA replication, recombination, and repair]