| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG3481 |
All predicted COG clusters |
|---|---|---|---|
| 1g024592m | 265 | hhsearch probability: 96.20 Identity: 22% subject length: 287 Length of aligned reigon: 63 Coverage over query: 81-146 Coverage over subject: 18-80 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG3355, Predicted transcriptional regulator [Transcription] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1522, Lrp Transcriptional regulators [Transcription] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1414, IclR Transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] |
| 1g023576m | 280 | hhsearch probability: 97.03 Identity: 29% subject length: 287 Length of aligned reigon: 63 Coverage over query: 84-149 Coverage over subject: 18-80 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3111, Periplasmic protein with OB-fold [Function unknown] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG1522, Lrp Transcriptional regulators [Transcription] COG3355, Predicted transcriptional regulator [Transcription] COG2345, Predicted transcriptional regulator [Transcription] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1349, GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] COG1414, IclR Transcriptional regulator [Transcription] COG2188, PhnF Transcriptional regulators [Transcription] |
| 1g027623m | 221 | hhsearch probability: 98.07 Identity: 21% subject length: 287 Length of aligned reigon: 103 Coverage over query: 25-132 Coverage over subject: 143-261 |
COG1418, Predicted HD superfamily hydrolase [General function prediction only] COG4339, Uncharacterized protein conserved in bacteria [Function unknown] COG2844, GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones] COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism] COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms] COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms] COG1078, HD superfamily phosphohydrolases [General function prediction only] COG1480, Predicted membrane-associated HD superfamily hydrolase [General function prediction only] COG2316, Predicted hydrolase (HD superfamily) [General function prediction only] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG3294, HD supefamily hydrolase [General function prediction only] COG0232, Dgt dGTP triphosphohydrolase [Nucleotide transport and metabolism] COG1896, Predicted hydrolases of HD superfamily [General function prediction only] COG0751, GlyS Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis] COG4341, Predicted HD phosphohydrolase [General function prediction only] COG1639, Predicted signal transduction protein [Signal transduction mechanisms] COG0248, GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] |
| 1g043474m | 160 | hhsearch probability: 97.83 Identity: 27% subject length: 287 Length of aligned reigon: 63 Coverage over query: 52-135 Coverage over subject: 19-81 |
COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG3390, Uncharacterized protein conserved in archaea [Function unknown] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG0017, AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] COG3111, Periplasmic protein with OB-fold [Function unknown] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1190, LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] |
| 1g032530m | 139 | hhsearch probability: 98.19 Identity: 14% subject length: 287 Length of aligned reigon: 73 Coverage over query: 16-90 Coverage over subject: 3-78 |
COG3481, Predicted HD-superfamily hydrolase [General function prediction only] COG4085, Predicted RNA-binding protein, contains TRAM domain [General function prediction only] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG5235, RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair] COG1200, RecG RecG-like helicase [DNA replication, recombination, and repair / Transcription] COG1570, XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair] COG1599, RFA1 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] |