List of proteins associated with COG cluster: COG5228   POP2 mRNA deadenylase subunit [RNA processing and modification]
Protein ID
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analysis report

Lenth
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analysis report

Similarity with COG COG5228
All predicted COG clusters
1g023843m 276 hhsearch probability: 91.75    Identity: 20%
subject length: 299   Length of aligned reigon: 147
Coverage over query: 81-235   Coverage over subject: 43-250
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g019538m 339 hhsearch probability: 94.40    Identity: 15%
subject length: 299   Length of aligned reigon: 183
Coverage over query: 113-305   Coverage over subject: 28-252
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g023906m 275 hhsearch probability: 92.96    Identity: 20%
subject length: 299   Length of aligned reigon: 148
Coverage over query: 80-234   Coverage over subject: 42-250
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g024291m 269 hhsearch probability: 90.83    Identity: 19%
subject length: 299   Length of aligned reigon: 144
Coverage over query: 79-228   Coverage over subject: 41-250
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g015078m 413 hhsearch probability: 93.19    Identity: 18%
subject length: 299   Length of aligned reigon: 153
Coverage over query: 154-315   Coverage over subject: 79-252
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
1g015017m 414 hhsearch probability: 92.04    Identity: 19%
subject length: 299   Length of aligned reigon: 160
Coverage over query: 155-323   Coverage over subject: 79-259
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
1g017267m 374 hhsearch probability: 94.07    Identity: 21%
subject length: 299   Length of aligned reigon: 182
Coverage over query: 97-289   Coverage over subject: 43-265
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
1g016965m 379 hhsearch probability: 92.61    Identity: 20%
subject length: 299   Length of aligned reigon: 181
Coverage over query: 137-327   Coverage over subject: 43-263
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
1g037872m 146 hhsearch probability: 95.93    Identity: 16%
subject length: 299   Length of aligned reigon: 87
Coverage over query: 29-122   Coverage over subject: 157-253
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0749, PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair]
1g017210m 375 hhsearch probability: 94.84    Identity: 21%
subject length: 299   Length of aligned reigon: 180
Coverage over query: 98-288   Coverage over subject: 43-263
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0587, DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
1g027892m 217 hhsearch probability: 94.36    Identity: 19%
subject length: 299   Length of aligned reigon: 167
Coverage over query: 35-213   Coverage over subject: 40-256
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
1g036883m 277 hhsearch probability: 94.89    Identity: 19%
subject length: 299   Length of aligned reigon: 171
Coverage over query: 3-182   Coverage over subject: 43-252
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG0417, PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
1g036628m 254 hhsearch probability: 92.65    Identity: 20%
subject length: 299   Length of aligned reigon: 152
Coverage over query: 14-168   Coverage over subject: 43-265
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g020417m 326 hhsearch probability: 96.04    Identity: 16%
subject length: 299   Length of aligned reigon: 151
Coverage over query: 126-297   Coverage over subject: 80-248
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
COG5018, KapD Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG2925, SbcB Exonuclease I [DNA replication, recombination, and repair]
COG1949, Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG3359, Predicted exonuclease [DNA replication, recombination, and repair]
1g007386m 605 hhsearch probability: 99.27    Identity: 24%
subject length: 299   Length of aligned reigon: 109
Coverage over query: 215-360   Coverage over subject: 138-253
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g008236m 573 hhsearch probability: 99.34    Identity: 24%
subject length: 299   Length of aligned reigon: 109
Coverage over query: 183-328   Coverage over subject: 138-253
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g006991m 622 hhsearch probability: 99.87    Identity: 18%
subject length: 299   Length of aligned reigon: 119
Coverage over query: 27-158   Coverage over subject: 18-140
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g007029m 621 hhsearch probability: 99.85    Identity: 18%
subject length: 299   Length of aligned reigon: 120
Coverage over query: 26-158   Coverage over subject: 17-140
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g048636m 150 hhsearch probability: 100.00    Identity: 52%
subject length: 299   Length of aligned reigon: 116
Coverage over query: 21-150   Coverage over subject: 17-132
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
1g023967m 274 hhsearch probability: 100.00    Identity: 49%
subject length: 299   Length of aligned reigon: 257
Coverage over query: 8-269   Coverage over subject: 15-272
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
1g023963m 274 hhsearch probability: 100.00    Identity: 47%
subject length: 299   Length of aligned reigon: 264
Coverage over query: 1-269   Coverage over subject: 7-273
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
1g024017m 274 hhsearch probability: 100.00    Identity: 47%
subject length: 299   Length of aligned reigon: 264
Coverage over query: 1-269   Coverage over subject: 7-273
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
1g025183m 256 hhsearch probability: 100.00    Identity: 42%
subject length: 299   Length of aligned reigon: 241
Coverage over query: 3-253   Coverage over subject: 7-271
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
1g038950m 297 hhsearch probability: 100.00    Identity: 37%
subject length: 299   Length of aligned reigon: 246
Coverage over query: 5-256   Coverage over subject: 18-272
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
1g027829m 218 hhsearch probability: 100.00    Identity: 45%
subject length: 299   Length of aligned reigon: 203
Coverage over query: 4-215   Coverage over subject: 6-271
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
1g023991m 274 hhsearch probability: 100.00    Identity: 48%
subject length: 299   Length of aligned reigon: 256
Coverage over query: 9-269   Coverage over subject: 17-273
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
1g023614m 280 hhsearch probability: 100.00    Identity: 44%
subject length: 299   Length of aligned reigon: 258
Coverage over query: 9-276   Coverage over subject: 13-270
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]
1g022773m 292 hhsearch probability: 100.00    Identity: 48%
subject length: 299   Length of aligned reigon: 242
Coverage over query: 21-278   Coverage over subject: 17-258
COG5228, POP2 mRNA deadenylase subunit [RNA processing and modification]
COG0847, DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]
COG0349, Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis]