COG cluster associated with parent COG general functional cagegory: Signal transduction mechanisms
COG ID
Link to COG
Functional Description Protein Count
Link to
protein list

COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] 437
COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 300
COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] 225
COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 212
COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] 202
COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] 202
COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] 182
COG1217 TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] 155
COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] 153
COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 106
COG1221 PspF Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] 97
COG0467 RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms] 96
COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] 93
COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] 84
COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] 80
COG3480 SdrC Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms] 78
COG3604 FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] 77
COG3629 DnrI DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms] 76
COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] 57
COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms] 54
COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms] 53
COG4650 RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms] 52
COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 50
COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 50
COG3947 Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] 49
COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 45
COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 43
COG5422 ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 42
COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 39
COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms] 31
COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 27
COG0834 HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 23
COG1842 PspA Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms] 22
COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms] 21
COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 21
COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms] 20
COG3103 SH3 domain protein [Signal transduction mechanisms] 19
COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] 18
COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms] 17
COG3456 Predicted component of the type VI protein secretion system, contains a FHA domain [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] 16
COG1716 FOG: FHA domain [Signal transduction mechanisms] 16
COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] 15
COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 15
COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] 14
COG2197 CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] 14
COG1702 PhoH Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms] 13
COG3852 NtrB Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms] 13
COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms] 12
COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] 12
COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] 12
COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] 12
COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] 11
COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] 11
COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] 11
COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms] 11
COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] 11
COG2203 FhlA FOG: GAF domain [Signal transduction mechanisms] 10
COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] 10
COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] 10
COG2202 AtoS FOG: PAS/PAC domain [Signal transduction mechanisms] 10
COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] 10
COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] 9
COG0317 SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] 9
COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] 9
COG1956 GAF domain-containing protein [Signal transduction mechanisms] 8
COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] 8
COG5040 BMH1 14-3-3 family protein [Signal transduction mechanisms] 7
COG3275 LytS Putative regulator of cell autolysis [Signal transduction mechanisms] 7
COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] 7
COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] 7
COG0271 BolA Stress-induced morphogen (activity unknown) [Signal transduction mechanisms] 7
COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] 7
COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms] 7
COG4566 TtrR Response regulator [Signal transduction mechanisms] 6
COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms] 6
COG5409 EXS domain-containing protein [Signal transduction mechanisms] 5
COG2199 c-di-GMP synthetase (diguanylate cyclase, GGDEF domain) [Signal transduction mechanisms] 5
COG0394 Wzb Protein-tyrosine-phosphatase [Signal transduction mechanisms] 5
COG3851 UhpB Signal transduction histidine kinase, glucose-6-phosphate specific [Signal transduction mechanisms] 5
COG2508 Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] 4
COG5408 SPX domain-containing protein [Signal transduction mechanisms] 4
COG4564 Signal transduction histidine kinase [Signal transduction mechanisms] 4
COG4219 MecR1 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component [Transcription / Signal transduction mechanisms] 4
COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] 3
COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] 3
COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] 3
COG1974 LexA SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms] 3
COG4725 IME4 Transcriptional activator, adenine-specific DNA methyltransferase [Signal transduction mechanisms / Transcription] 3
COG0840 Tar Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] 2
COG1734 DksA DnaK suppressor protein [Signal transduction mechanisms] 2
COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription] 2
COG5041 SKB2 Casein kinase II, beta subunit [Signal transduction mechanisms / Cell division and chromosome partitioning / Transcription] 2
COG5635 Predicted NTPase (NACHT family) [Signal transduction mechanisms] 2
COG5057 LAG1 Phosphotyrosyl phosphatase activator [Cell division and chromosome partitioning / Signal transduction mechanisms] 2
COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms] 2
COG3880 Modulator of heat shock repressor CtsR, McsA [Signal transduction mechanisms] 2
COG5035 CDC50 Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms] 1
COG5278 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms] 1
COG2206 c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms] 1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms] 1
COG1871 CheD Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms] 1
COG3848 Phosphohistidine swiveling domain [Signal transduction mechanisms] 1
COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms] 1